Query 043304
Match_columns 454
No_of_seqs 217 out of 1775
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 05:43:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043304.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043304hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.1E-61 7.2E-66 488.3 32.2 397 2-440 39-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.2E-53 4.2E-58 437.7 38.1 410 2-441 32-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.3E-54 1.1E-58 443.0 33.6 411 2-441 34-479 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.2E-52 4.2E-57 427.7 34.0 397 4-441 37-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 3.8E-51 1.3E-55 417.7 34.4 394 4-440 39-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 5.7E-32 1.9E-36 273.3 27.0 362 2-440 38-420 (424)
7 1iir_A Glycosyltransferase GTF 100.0 1.4E-30 4.7E-35 262.6 15.7 352 2-444 26-403 (415)
8 4amg_A Snogd; transferase, pol 100.0 3.7E-29 1.3E-33 250.4 22.0 163 236-439 224-398 (400)
9 1rrv_A Glycosyltransferase GTF 100.0 2.6E-29 9E-34 253.2 15.9 354 2-444 26-404 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 2.6E-27 8.9E-32 237.8 19.2 343 2-441 26-382 (404)
11 3rsc_A CALG2; TDP, enediyne, s 99.9 5.2E-26 1.8E-30 228.7 26.6 332 2-415 46-396 (415)
12 3ia7_A CALG4; glycosysltransfe 99.9 2E-25 6.9E-30 223.1 26.6 332 2-415 30-381 (402)
13 2iyf_A OLED, oleandomycin glyc 99.9 3E-25 1E-29 224.3 23.4 334 2-415 33-382 (430)
14 2yjn_A ERYCIII, glycosyltransf 99.9 7.7E-25 2.6E-29 222.3 21.8 169 237-442 255-436 (441)
15 2p6p_A Glycosyl transferase; X 99.9 2.7E-24 9.3E-29 214.0 23.3 324 2-442 26-380 (384)
16 3oti_A CALG3; calicheamicin, T 99.9 6.2E-21 2.1E-25 190.7 25.0 304 2-415 46-380 (398)
17 4fzr_A SSFS6; structural genom 99.9 1.7E-21 5.7E-26 194.8 20.8 316 2-415 41-383 (398)
18 2o6l_A UDP-glucuronosyltransfe 99.8 3.7E-21 1.3E-25 169.1 12.2 153 234-415 6-169 (170)
19 3tsa_A SPNG, NDP-rhamnosyltran 99.8 9.7E-20 3.3E-24 181.4 22.6 312 2-415 27-371 (391)
20 3otg_A CALG1; calicheamicin, T 99.8 2.3E-18 8E-23 172.5 25.7 311 2-415 46-391 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.5 1.1E-12 3.6E-17 129.4 24.5 127 249-397 180-325 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.0 4.5E-08 1.6E-12 95.5 24.1 125 249-397 183-324 (364)
23 2jzc_A UDP-N-acetylglucosamine 98.5 3.1E-07 1.1E-11 83.1 8.1 122 249-393 28-196 (224)
24 3okp_A GDP-mannose-dependent a 97.8 0.0038 1.3E-07 60.6 23.0 122 251-397 199-345 (394)
25 3ot5_A UDP-N-acetylglucosamine 97.8 0.00049 1.7E-08 68.1 15.5 69 316-397 282-362 (403)
26 3fro_A GLGA glycogen synthase; 97.6 0.012 4E-07 58.0 23.7 138 251-411 252-411 (439)
27 1v4v_A UDP-N-acetylglucosamine 97.6 0.0012 4.1E-08 64.2 16.0 69 316-397 255-335 (376)
28 2jjm_A Glycosyl transferase, g 97.6 0.0073 2.5E-07 58.9 21.7 72 316-397 267-351 (394)
29 3dzc_A UDP-N-acetylglucosamine 97.4 0.0034 1.2E-07 61.9 15.1 69 316-397 288-368 (396)
30 3hbm_A UDP-sugar hydrolase; PS 97.3 0.00072 2.5E-08 63.3 8.9 108 249-375 157-274 (282)
31 4hwg_A UDP-N-acetylglucosamine 97.2 0.0089 3E-07 58.6 15.8 121 249-397 203-343 (385)
32 2gek_A Phosphatidylinositol ma 97.1 0.059 2E-06 52.3 20.9 122 251-397 209-350 (406)
33 2f9f_A First mannosyl transfer 96.8 0.0051 1.7E-07 52.9 9.0 122 251-397 24-163 (177)
34 1vgv_A UDP-N-acetylglucosamine 95.8 0.043 1.5E-06 53.0 10.5 122 249-397 205-343 (384)
35 2bfw_A GLGA glycogen synthase; 95.8 0.071 2.4E-06 46.2 10.9 83 317-410 96-195 (200)
36 3qhp_A Type 1 capsular polysac 95.7 0.058 2E-06 45.3 9.8 135 251-412 3-156 (166)
37 3c48_A Predicted glycosyltrans 95.4 0.098 3.4E-06 51.5 11.4 89 315-413 305-408 (438)
38 2iw1_A Lipopolysaccharide core 94.7 0.15 5E-06 48.8 10.3 88 316-412 253-353 (374)
39 4gyw_A UDP-N-acetylglucosamine 94.5 0.45 1.5E-05 50.5 14.3 95 248-351 521-629 (723)
40 3beo_A UDP-N-acetylglucosamine 94.3 0.11 3.7E-06 49.9 8.2 69 316-397 263-343 (375)
41 3rhz_A GTF3, nucleotide sugar 93.3 0.097 3.3E-06 50.2 5.7 100 317-438 215-336 (339)
42 2r60_A Glycosyl transferase, g 93.2 0.35 1.2E-05 48.6 10.1 73 315-397 334-425 (499)
43 3oy2_A Glycosyltransferase B73 92.5 2.5 8.5E-05 40.8 14.9 69 318-397 256-356 (413)
44 3q3e_A HMW1C-like glycosyltran 92.2 0.62 2.1E-05 48.0 10.1 128 250-397 441-589 (631)
45 2vsy_A XCC0866; transferase, g 88.7 2.8 9.7E-05 42.5 11.7 73 316-397 434-523 (568)
46 2x6q_A Trehalose-synthase TRET 87.4 6.1 0.00021 38.0 12.7 69 315-397 292-380 (416)
47 2xci_A KDO-transferase, 3-deox 85.8 0.85 2.9E-05 44.0 5.4 66 341-415 299-364 (374)
48 2qzs_A Glycogen synthase; glyc 84.9 2.4 8.1E-05 42.1 8.4 122 251-397 293-445 (485)
49 2iuy_A Avigt4, glycosyltransfe 83.9 1.8 6.3E-05 40.6 6.7 117 252-395 164-307 (342)
50 1rzu_A Glycogen synthase 1; gl 83.3 9.4 0.00032 37.6 12.1 122 251-397 292-444 (485)
51 3s28_A Sucrose synthase 1; gly 70.6 22 0.00074 38.0 10.7 57 341-407 685-745 (816)
52 2hy7_A Glucuronosyltransferase 66.4 5.5 0.00019 38.7 4.8 67 315-397 264-353 (406)
53 3vue_A GBSS-I, granule-bound s 63.8 43 0.0015 33.7 11.1 126 251-395 328-476 (536)
54 3tov_A Glycosyl transferase fa 60.2 14 0.00049 34.9 6.4 87 249-350 185-286 (349)
55 2x0d_A WSAF; GT4 family, trans 59.0 4.3 0.00015 39.6 2.5 71 316-397 295-380 (413)
56 2wqk_A 5'-nucleotidase SURE; S 52.7 14 0.00047 33.4 4.5 30 87-116 85-127 (251)
57 3to5_A CHEY homolog; alpha(5)b 50.4 20 0.00068 28.7 4.7 32 87-118 57-97 (134)
58 2r60_A Glycosyl transferase, g 50.2 13 0.00046 36.7 4.5 31 87-117 120-152 (499)
59 2lpm_A Two-component response 48.7 16 0.00054 28.8 3.8 29 87-115 53-86 (123)
60 3gl9_A Response regulator; bet 39.6 46 0.0016 25.2 5.3 32 87-118 46-86 (122)
61 2xvy_A Chelatase, putative; me 37.5 66 0.0022 28.9 6.7 39 249-287 10-50 (269)
62 2gt1_A Lipopolysaccharide hept 37.3 56 0.0019 30.0 6.3 128 249-397 178-323 (326)
63 3s28_A Sucrose synthase 1; gly 34.5 23 0.00079 37.8 3.4 29 87-115 407-437 (816)
64 2q5c_A NTRC family transcripti 34.1 46 0.0016 28.5 4.7 45 69-120 128-172 (196)
65 3c48_A Predicted glycosyltrans 34.0 71 0.0024 30.4 6.7 31 87-117 122-154 (438)
66 3pdi_B Nitrogenase MOFE cofact 33.6 45 0.0015 32.9 5.2 34 71-114 366-399 (458)
67 3t6k_A Response regulator rece 30.1 77 0.0026 24.4 5.3 32 87-118 48-88 (136)
68 3m6m_D Sensory/regulatory prot 29.4 59 0.002 25.4 4.5 31 87-117 58-99 (143)
69 1psw_A ADP-heptose LPS heptosy 29.3 51 0.0018 30.5 4.7 36 249-284 180-219 (348)
70 3f6p_A Transcriptional regulat 28.0 82 0.0028 23.5 5.0 32 87-118 46-83 (120)
71 3tl4_X Glutaminyl-tRNA synthet 26.8 79 0.0027 26.9 4.8 49 358-416 103-154 (187)
72 2pju_A Propionate catabolism o 26.5 86 0.0029 27.5 5.2 41 69-116 140-180 (225)
73 3ip0_A 2-amino-4-hydroxy-6-hyd 25.3 76 0.0026 26.2 4.3 27 251-277 2-28 (158)
74 1f9y_A HPPK, protein (6-hydrox 24.5 80 0.0027 26.0 4.3 27 251-277 2-28 (158)
75 2qx0_A 7,8-dihydro-6-hydroxyme 24.1 96 0.0033 25.6 4.7 28 251-278 3-30 (159)
76 1tmy_A CHEY protein, TMY; chem 24.0 1.5E+02 0.005 21.7 5.8 32 87-118 47-85 (120)
77 3cg0_A Response regulator rece 23.8 1.3E+02 0.0045 22.8 5.6 32 87-118 54-92 (140)
78 3ty2_A 5'-nucleotidase SURE; s 23.6 88 0.003 28.2 4.7 88 3-117 36-136 (261)
79 3c3m_A Response regulator rece 23.0 1.2E+02 0.004 23.2 5.1 31 87-117 47-86 (138)
80 2w36_A Endonuclease V; hypoxan 22.9 37 0.0013 29.9 2.1 43 70-117 91-140 (225)
81 3b2n_A Uncharacterized protein 22.8 1.5E+02 0.0052 22.4 5.7 32 87-118 49-87 (133)
82 1dbw_A Transcriptional regulat 22.2 1.4E+02 0.0048 22.2 5.3 32 87-118 47-85 (126)
83 3qbc_A 2-amino-4-hydroxy-6-hyd 22.1 96 0.0033 25.7 4.3 27 251-277 6-32 (161)
84 2a9o_A Response regulator; ess 21.8 1.7E+02 0.0059 21.2 5.7 32 87-118 45-82 (120)
85 2lnd_A De novo designed protei 21.6 95 0.0033 22.1 3.6 49 342-395 49-100 (112)
86 1mb3_A Cell division response 21.5 1.5E+02 0.0052 21.8 5.4 31 87-117 45-84 (124)
87 3grc_A Sensor protein, kinase; 21.4 1.5E+02 0.0052 22.5 5.5 32 87-118 50-90 (140)
88 1cbk_A Protein (7,8-dihydro-6- 21.1 94 0.0032 25.7 4.1 27 251-277 3-29 (160)
89 1srr_A SPO0F, sporulation resp 20.9 1.5E+02 0.0053 21.8 5.3 32 87-118 47-85 (124)
90 3p9x_A Phosphoribosylglycinami 20.9 1.2E+02 0.004 26.4 4.9 45 71-116 15-60 (211)
91 1vgv_A UDP-N-acetylglucosamine 20.7 94 0.0032 28.9 4.7 39 70-115 76-117 (384)
92 3u7q_A Nitrogenase molybdenum- 20.2 76 0.0026 31.5 4.0 36 69-114 406-441 (492)
93 1zgz_A Torcad operon transcrip 20.2 1.5E+02 0.005 21.8 5.0 32 87-118 46-83 (122)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.1e-61 Score=488.34 Aligned_cols=397 Identities=27% Similarity=0.419 Sum_probs=318.3
Q ss_pred CCC--cEEEEEeCCcChhhhhhcCCC-CCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHhhchHHHHHHHHH
Q 043304 2 LQS--LLQTLVNTPLNLKRLKSSLPQ-NSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQASASLEPHFKKLISE 78 (454)
Q Consensus 2 ~rG--~~VT~~t~~~~~~~v~~~~~~-~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~ 78 (454)
+|| ++|||++|+.+++++.+.... .++|+|++|| ||+|++.+...+ +...+..++.+. .+.+++.+++
T Consensus 39 ~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip-----dglp~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~ 109 (454)
T 3hbf_A 39 TEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH-----DGLPKGYVSSGN-PREPIFLFIKAM---QENFKHVIDE 109 (454)
T ss_dssp HHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC-----CCCCTTCCCCSC-TTHHHHHHHHHH---HHHHHHHHHH
T ss_pred hCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC-----CCCCCCccccCC-hHHHHHHHHHHH---HHHHHHHHHH
Confidence 468 999999999888877553211 1679999998 689988765443 221223333333 3444555544
Q ss_pred HhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCC----CCCCCcc-ccCCCCCCccc
Q 043304 79 LVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHR----KTDADKF-LLPDFPEASTL 153 (454)
Q Consensus 79 ~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~-~~p~~p~~~~~ 153 (454)
+.++. +.++||||+|.+++|+.++|+++|||++.||+++++.++.+++++...... ......+ .+||+|. +
T Consensus 110 ~~~~~-~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~p~---~ 185 (454)
T 3hbf_A 110 AVAET-GKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGFPE---L 185 (454)
T ss_dssp HHHHH-CCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHHTTSSCBCCSTTSCC---B
T ss_pred HHhhc-CCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCccccccccccCCCCCC---c
Confidence 32221 226899999999999999999999999999999999988877654322110 0111223 3788886 8
Q ss_pred cccccchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCcccCCCCCCCCC
Q 043304 154 HVTQMSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTESRGGAGKEYG 233 (454)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~ 233 (454)
+.++++..+.. .....+..++.+..+...+++++++||+++||+++++++++.+ +++++|||++..... ...
T Consensus 186 ~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~vGPl~~~~~~------~~~ 257 (454)
T 3hbf_A 186 KASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLLNVGPFNLTTPQ------RKV 257 (454)
T ss_dssp CGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEECCCHHHHSCC------SCC
T ss_pred ChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEECCccccccc------ccc
Confidence 88889887654 4445677777888888999999999999999999999988655 799999999864311 111
Q ss_pred CCccccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhcc
Q 043304 234 ISAELCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKG 313 (454)
Q Consensus 234 ~~~~~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 313 (454)
..+.+|.+||+.+++++||||||||+...+.+++.+++.+|++++++|||++++.. . +.+|++|.++++
T Consensus 258 ~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~---------~-~~lp~~~~~~~~- 326 (454)
T 3hbf_A 258 SDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP---------K-EKLPKGFLERTK- 326 (454)
T ss_dssp CCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH---------H-HHSCTTHHHHTT-
T ss_pred cchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc---------h-hcCCHhHHhhcC-
Confidence 23567999999988899999999999999999999999999999999999998642 1 348889988876
Q ss_pred CCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCH
Q 043304 314 SGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLK 383 (454)
Q Consensus 314 ~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 383 (454)
+++.++ +|+||.+||+|++||+||| +++|||||+||+++||+.||+++++.||+|+.+.. +.+++
T Consensus 327 -~~~~vv-~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~---~~~~~ 401 (454)
T 3hbf_A 327 -TKGKIV-AWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN---GVLTK 401 (454)
T ss_dssp -TTEEEE-SSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG---GSCCH
T ss_pred -CceEEE-eeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC---CCCCH
Confidence 555555 9999999999999999999 99999999999999999999999997899999986 68999
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHH
Q 043304 384 EDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAAL 440 (454)
Q Consensus 384 ~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~ 440 (454)
++|+++|+++|+++ ++++||+||+++++++++|+ .+||||.+++++||+++.
T Consensus 402 ~~l~~av~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 402 ESIKKALELTMSSE-KGGIMRQKIVKLKESAFKAV----EQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHHHHHHSSH-HHHHHHHHHHHHHHHHHHHT----STTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCC-hHHHHHHHHHHHHHHHHHhh----ccCCCHHHHHHHHHHHHh
Confidence 99999999999876 78899999999999999999 999999999999999874
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.2e-53 Score=437.73 Aligned_cols=410 Identities=28% Similarity=0.420 Sum_probs=303.3
Q ss_pred CC-CcEEEEEeCCcC--hhhhhhcCCC-CCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHhhchHHHHHHHH
Q 043304 2 LQ-SLLQTLVNTPLN--LKRLKSSLPQ-NSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQASASLEPHFKKLIS 77 (454)
Q Consensus 2 ~r-G~~VT~~t~~~~--~~~v~~~~~~-~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lL~ 77 (454)
+| ||+|||++++.+ ...+.+.... ..+++|+++|.. .+++ .. . .......+...+..+.+.++++++
T Consensus 32 ~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~----~~~~-~~---~-~~~~~~~~~~~~~~~~~~l~~ll~ 102 (480)
T 2vch_A 32 HLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPV----DLTD-LS---S-STRIESRISLTVTRSNPELRKVFD 102 (480)
T ss_dssp HHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCC----CCTT-SC---T-TCCHHHHHHHHHHTTHHHHHHHHH
T ss_pred hCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCC----CCCC-CC---C-chhHHHHHHHHHHhhhHHHHHHHH
Confidence 45 999999999984 4444431110 168999999853 1221 11 1 111123344556778899999998
Q ss_pred HHhhccCCCCC-cEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhh---CCCCCCC-CCccccCCCCCCcc
Q 043304 78 ELVNEQNGQKP-LCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVN---LPHRKTD-ADKFLLPDFPEAST 152 (454)
Q Consensus 78 ~~~~~~~g~~~-D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~---~p~~~~~-~~~~~~p~~p~~~~ 152 (454)
++.. +.++ ||||+|.++.|+..+|+++|||++.++++++..+..+++.+.. ....... .....+|+++.
T Consensus 103 ~~~~---~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p--- 176 (480)
T 2vch_A 103 SFVE---GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVP--- 176 (480)
T ss_dssp HHHH---TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCGGGCSSCBCCTTCCC---
T ss_pred Hhcc---CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCcccccCCcccCCCCCC---
Confidence 8631 1168 9999999999999999999999999999998877666543321 1110000 11134566654
Q ss_pred ccccccchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhc--CCCeEeeccCCCCcccCCCCCC
Q 043304 153 LHVTQMSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKF--GRPVWPIGPVLLSTESRGGAGK 230 (454)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~--~~~~~~vGpl~~~~~~~~~~~~ 230 (454)
+...+++..+... .......+.+.....++++++++||+++||++++..+.+.. .+++++|||++...... .
T Consensus 177 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~----~ 250 (480)
T 2vch_A 177 VAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQE----A 250 (480)
T ss_dssp BCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCCCCSCSC----C
T ss_pred CChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEEeccccccccc----c
Confidence 4455555544221 12334444555667778899999999999999888887521 26899999998654110 0
Q ss_pred CCCCCccccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCC------CCC-chhhhccCC
Q 043304 231 EYGISAELCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGF------DIN-SEFKAKEWL 303 (454)
Q Consensus 231 ~~~~~~~~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~------~~~-~~~~~~~~l 303 (454)
....+.+|.+||+++++++||||||||+...+.+++.++++||++++++|||+++..... +.. ..... ..+
T Consensus 251 -~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~l 328 (480)
T 2vch_A 251 -KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPL-TFL 328 (480)
T ss_dssp ------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGG-GGS
T ss_pred -CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchh-hhc
Confidence 012467899999998778999999999998899999999999999999999999865200 000 00011 248
Q ss_pred ChhHHHhhccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEE
Q 043304 304 PQGFEEKIKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEV 373 (454)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l 373 (454)
|+++.++++ .+|+++.+|+||.+||+|++||+||| +++|||||+||+++||+.||+++++.||+|+.+
T Consensus 329 p~~~~~~~~--~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l 406 (480)
T 2vch_A 329 PPGFLERTK--KRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 406 (480)
T ss_dssp CTTHHHHTT--TTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC
T ss_pred CHHHHHHhC--CCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEe
Confidence 899999988 88999977999999999999999999 999999999999999999999986556999999
Q ss_pred ecCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHHH
Q 043304 374 ARGLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAALI 441 (454)
Q Consensus 374 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~~ 441 (454)
...+++.+++++|+++|+++|+++ ++.+||+||+++++++++|+ .+||+|.+++++||+++.+
T Consensus 407 ~~~~~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~~~~~a~----~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 407 RAGDDGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKEAACRVL----KDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp CCCTTSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHHHHHHHT----STTSHHHHHHHHHHHHHHH
T ss_pred ecccCCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHHHHHH----hcCCCHHHHHHHHHHHHHH
Confidence 762223799999999999999876 67799999999999999999 8999999999999999976
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.3e-54 Score=443.05 Aligned_cols=411 Identities=22% Similarity=0.421 Sum_probs=304.3
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCC-----CCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHH-hhchHHHHHH
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQ-----NSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQAS-ASLEPHFKKL 75 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~-----~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l 75 (454)
+|||+|||++++.++.++.+.... .++++|+++| +++|+..... .. ..++..++..+ ..+.+.++++
T Consensus 34 ~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~lp~~~~~~-~~-~~~~~~~~~~~~~~~~~~l~~l 106 (482)
T 2pq6_A 34 LRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGLTPMEGDG-DV-SQDVPTLCQSVRKNFLKPYCEL 106 (482)
T ss_dssp HTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCCC-----------CCHHHHHHHHTTSSHHHHHHH
T ss_pred hCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCCCCccccc-Cc-chhHHHHHHHHHHHhhHHHHHH
Confidence 589999999999988777553110 0489999998 4666521001 11 12345566666 7788999999
Q ss_pred HHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHh-----hhhCCCCCCC--C----Cc-c-
Q 043304 76 ISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSL-----WVNLPHRKTD--A----DK-F- 142 (454)
Q Consensus 76 L~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~-----~~~~p~~~~~--~----~~-~- 142 (454)
++++.....+.+|||||+|.+++|+..+|+++|||+|.++++++.....+.+. ..+.|..... . +. .
T Consensus 107 l~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 186 (482)
T 2pq6_A 107 LTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVD 186 (482)
T ss_dssp HHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCC
T ss_pred HHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCCCCCccccccccccccCccc
Confidence 99875210012799999999999999999999999999999998776554322 2344432211 0 11 1
Q ss_pred ccCCCCCCccccccccchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCC-
Q 043304 143 LLPDFPEASTLHVTQMSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLS- 221 (454)
Q Consensus 143 ~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~- 221 (454)
.+|+++. ++..+++.++............+.+..+...+++++++||+++||+++++++++.+ +++++|||++..
T Consensus 187 ~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~ 262 (482)
T 2pq6_A 187 WIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTI-PSIYPIGPLPSLL 262 (482)
T ss_dssp SSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHH
T ss_pred cCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccc
Confidence 2345443 45556665554332334455555666777888999999999999999999888766 889999999863
Q ss_pred cccC--C---CCCCCCCCCccccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCch
Q 043304 222 TESR--G---GAGKEYGISAELCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSE 296 (454)
Q Consensus 222 ~~~~--~---~~~~~~~~~~~~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~ 296 (454)
.... . ......+..+.+|.+|||+++++++|||||||+...+.+++.+++.+|++++++|||+++.+. ..++
T Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~---~~~~ 339 (482)
T 2pq6_A 263 KQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDL---VIGG 339 (482)
T ss_dssp HTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGG---STTT
T ss_pred cccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcCCc---cccc
Confidence 2110 0 000011223456899999987789999999999888999999999999999999999997531 0011
Q ss_pred hhhccCCChhHHHhhccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHh
Q 043304 297 FKAKEWLPQGFEEKIKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEE 366 (454)
Q Consensus 297 ~~~~~~l~~~~~~~~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~ 366 (454)
. ..+|+++.+++. .|+.+.+|+||.++|+|+++++||| +++|||||+||+++||+.||+++++.
T Consensus 340 ~---~~l~~~~~~~~~---~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~ 413 (482)
T 2pq6_A 340 S---VIFSSEFTNEIA---DRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE 413 (482)
T ss_dssp G---GGSCHHHHHHHT---TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT
T ss_pred c---ccCcHhHHHhcC---CCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH
Confidence 1 237888888774 4566669999999999999999999 99999999999999999999999855
Q ss_pred hceeEEEecCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHHH
Q 043304 367 IGVCVEVARGLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAALI 441 (454)
Q Consensus 367 ~g~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~~ 441 (454)
||+|+.+.. .++.++|+++|+++|+++ ++++||+||+++++.+++|+ .+||||.+++++|++++.+
T Consensus 414 ~G~g~~l~~----~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 414 WEIGMEIDT----NVKREELAKLINEVIAGD-KGKKMKQKAMELKKKAEENT----RPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp SCCEEECCS----SCCHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHT----STTCHHHHHHHHHHHHTTC
T ss_pred hCEEEEECC----CCCHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHH----hcCCcHHHHHHHHHHHHHh
Confidence 599999963 589999999999999887 67789999999999999999 8999999999999998854
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.2e-52 Score=427.68 Aligned_cols=397 Identities=23% Similarity=0.369 Sum_probs=294.9
Q ss_pred CcEEEEEeCCcChhhhhhcCCC--CCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHhhchHHHHHHHHHHhh
Q 043304 4 SLLQTLVNTPLNLKRLKSSLPQ--NSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQASASLEPHFKKLISELVN 81 (454)
Q Consensus 4 G~~VT~~t~~~~~~~v~~~~~~--~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~~ 81 (454)
|+.|||++++.+..++.+...+ .++++|++++ +|+|++.+... .+...+..+. +.+.+.++++++++.+
T Consensus 37 ~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~-----~glp~~~~~~~-~~~~~~~~~~---~~~~~~~~~~l~~l~~ 107 (456)
T 2c1x_A 37 HAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS-----DGVPEGYVFAG-RPQEDIELFT---RAAPESFRQGMVMAVA 107 (456)
T ss_dssp TSEEEEEECHHHHHHHC-------CTTEEEEECC-----CCCCTTCCCCC-CTTHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCchhHHHhhccccccCCCceEEEeCC-----CCCCCcccccC-ChHHHHHHHH---HHhHHHHHHHHHHHHh
Confidence 6788999998776655442211 1579999987 57777654211 1211112222 2334455555554332
Q ss_pred ccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhh---hCCCCC--CC-CCc-cccCCCCCCcccc
Q 043304 82 EQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWV---NLPHRK--TD-ADK-FLLPDFPEASTLH 154 (454)
Q Consensus 82 ~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~---~~p~~~--~~-~~~-~~~p~~p~~~~~~ 154 (454)
.. +.+|||||+|.++.|+..+|+++|||+|.++++++..+..+.+... ...... .. ... ..+|+++. ++
T Consensus 108 ~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~ 183 (456)
T 2c1x_A 108 ET-GRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSK---VR 183 (456)
T ss_dssp HH-TCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CB
T ss_pred cc-CCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcccccccccccccCCCCCc---cc
Confidence 11 1279999999999999999999999999999998877655432211 111000 11 111 23667765 56
Q ss_pred ccccchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCcccCCCCCCCCCC
Q 043304 155 VTQMSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTESRGGAGKEYGI 234 (454)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~ 234 (454)
..+++..+........+...+.+..+..++++++++||+++||+++++.+++.+ +++++|||++..... ....
T Consensus 184 ~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~~~~~vGpl~~~~~~------~~~~ 256 (456)
T 2c1x_A 184 FRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-KTYLNIGPFNLITPP------PVVP 256 (456)
T ss_dssp GGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-SCEEECCCHHHHC------------
T ss_pred HHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-CCEEEecCcccCccc------cccc
Confidence 666665443222223445555666667788999999999999999888888765 789999999864310 0012
Q ss_pred CccccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccC
Q 043304 235 SAELCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGS 314 (454)
Q Consensus 235 ~~~~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 314 (454)
.+.+|.+||+.++++++|||||||+...+.+++.+++++|+.++++|||+++.+. . ..+|+++.+++.
T Consensus 257 ~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~---------~-~~l~~~~~~~~~-- 324 (456)
T 2c1x_A 257 NTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA---------R-VHLPEGFLEKTR-- 324 (456)
T ss_dssp ---CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG---------G-GGSCTTHHHHHT--
T ss_pred chhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc---------h-hhCCHHHHhhcC--
Confidence 2456899999987889999999999988899999999999999999999997541 1 347888877764
Q ss_pred CCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHH
Q 043304 315 GQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKE 384 (454)
Q Consensus 315 ~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 384 (454)
+ |+.+.+|+||.++|+|+++++||| +++|||||+||+++||+.||+++++.||+|+.+.. +.++.+
T Consensus 325 ~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~---~~~~~~ 400 (456)
T 2c1x_A 325 G-YGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG---GVFTKS 400 (456)
T ss_dssp T-TEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG---GSCCHH
T ss_pred C-ceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecC---CCcCHH
Confidence 4 555569999999999999999999 99999999999999999999999999999999976 679999
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHHH
Q 043304 385 DLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAALI 441 (454)
Q Consensus 385 ~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~~ 441 (454)
+|+++|+++|+++ ++++||+||+++++.+++|+ .+||||.+++++||+++.+
T Consensus 401 ~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 401 GLMSCFDQILSQE-KGKKLRENLRALRETADRAV----GPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHT----STTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHCCC-cHHHHHHHHHHHHHHHHHhh----hcCCcHHHHHHHHHHHHHh
Confidence 9999999999887 67899999999999999999 8999999999999999854
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3.8e-51 Score=417.68 Aligned_cols=394 Identities=26% Similarity=0.414 Sum_probs=295.2
Q ss_pred CcEEEEEeCCcCh-----hhhhhcCCCCCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHhhchHHHHHHHHH
Q 043304 4 SLLQTLVNTPLNL-----KRLKSSLPQNSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQASASLEPHFKKLISE 78 (454)
Q Consensus 4 G~~VT~~t~~~~~-----~~v~~~~~~~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~ 78 (454)
||+|||++|+.+. +.+.+.....++++|++||.. .+++ .+.... .+.. +...+..+.+.++++|++
T Consensus 39 G~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~-~~~~~~---~~~~-~~~~~~~~~~~~~~ll~~ 109 (463)
T 2acv_A 39 NLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPP-QELLKS---PEFY-ILTFLESLIPHVKATIKT 109 (463)
T ss_dssp TEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCC-GGGGGS---HHHH-HHHHHHHTHHHHHHHHHH
T ss_pred CcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCc-ccccCC---ccHH-HHHHHHhhhHHHHHHHHh
Confidence 9999999999874 222221011168999999942 2332 110111 1112 556667888899999988
Q ss_pred HhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCC-CCCC-CC---ccccCCC-CCCcc
Q 043304 79 LVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPH-RKTD-AD---KFLLPDF-PEAST 152 (454)
Q Consensus 79 ~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~-~~~~-~~---~~~~p~~-p~~~~ 152 (454)
+. +.+|||||+|.++.|+..+|+++|||++.++++++..+..+++.+..... .... .. ...+|++ +.
T Consensus 110 ~~----~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~--- 182 (463)
T 2acv_A 110 IL----SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQ--- 182 (463)
T ss_dssp HC----CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCCSSGGGCEECCTTCSSC---
T ss_pred cc----CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCCCccccCceeECCCCCCC---
Confidence 51 12799999999999999999999999999999998877766655433210 0000 11 2345666 44
Q ss_pred ccccccchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhc--CCCeEeeccCCCCcccCCCCCC
Q 043304 153 LHVTQMSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKF--GRPVWPIGPVLLSTESRGGAGK 230 (454)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~--~~~~~~vGpl~~~~~~~~~~~~ 230 (454)
+...+++..+... ......+.+.....++++++++||+++||++.++.+.+.. .+++++|||++....... ..
T Consensus 183 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~--~~ 257 (463)
T 2acv_A 183 VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPN--PK 257 (463)
T ss_dssp EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCB--TT
T ss_pred CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCcccccccc--cc
Confidence 5555666544322 1244444555667788999999999999999988888755 678999999986531000 00
Q ss_pred CCCCCccccccccCCCCCCceEEEecCCcc-CCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHH
Q 043304 231 EYGISAELCKKWLDTKPYSSVLYVSFGSQN-TIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEE 309 (454)
Q Consensus 231 ~~~~~~~~~~~~l~~~~~~~vvyvsfGS~~-~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~ 309 (454)
..+..+.+|.+||+.++++++|||||||+. ..+.+++.+++++|++++++|||+++.+. ..+|+++.+
T Consensus 258 ~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~-----------~~l~~~~~~ 326 (463)
T 2acv_A 258 LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK-----------KVFPEGFLE 326 (463)
T ss_dssp BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG-----------GGSCTTHHH
T ss_pred cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCc-----------ccCChhHHH
Confidence 001235689999999888899999999999 88999999999999999999999997531 237778877
Q ss_pred hh--ccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEE-ecC
Q 043304 310 KI--KGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEV-ARG 376 (454)
Q Consensus 310 ~~--~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l-~~~ 376 (454)
++ . +++.++ +|+||.++|.|+++++||| +++|||||+||+++||+.||+++++.||+|+.+ ...
T Consensus 327 ~~~~~--~~~~v~-~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~ 403 (463)
T 2acv_A 327 WMELE--GKGMIC-GWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDY 403 (463)
T ss_dssp HHHHH--CSEEEE-SSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSC
T ss_pred hhccC--CCEEEE-ccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEeccc
Confidence 76 5 555555 7999999999999999999 999999999999999999999965445999999 311
Q ss_pred CCc--ccCHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHH
Q 043304 377 LTC--EVLKEDLSAKIELAMN-ETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAAL 440 (454)
Q Consensus 377 ~~~--~~~~~~l~~ai~~vl~-~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~ 440 (454)
..+ .++.++|+++|+++|+ ++ +||+||+++++.+++|+ .+||||.+++++||++++
T Consensus 404 ~~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~----~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 404 RKGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAV----VDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp CTTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHT----STTSHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHH----hcCCcHHHHHHHHHHHhc
Confidence 114 6899999999999996 34 79999999999999999 899999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.7e-32 Score=273.35 Aligned_cols=362 Identities=17% Similarity=0.134 Sum_probs=231.7
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHH----HHHhhchHHHHHHHH
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFL----QASASLEPHFKKLIS 77 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~lL~ 77 (454)
++||+|||++++.+...+++ .|++|++++. +++.+.......+ .+...++ .....+.+.+.++++
T Consensus 38 ~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~ 106 (424)
T 2iya_A 38 ARGHRVSYAITDEFAAQVKA-----AGATPVVYDS-----ILPKESNPEESWP-EDQESAMGLFLDEAVRVLPQLEDAYA 106 (424)
T ss_dssp HTTCEEEEEECGGGHHHHHH-----HTCEEEECCC-----CSCCTTCTTCCCC-SSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HCCCeEEEEeCHHHHHHHHh-----CCCEEEecCc-----cccccccchhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 58999999999999888888 7899998883 3433321101111 1222222 222233344444444
Q ss_pred HHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCCCCCCCccccC-CCCCCcccccc
Q 043304 78 ELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHRKTDADKFLLP-DFPEASTLHVT 156 (454)
Q Consensus 78 ~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p-~~p~~~~~~~~ 156 (454)
+. +|||||+|.+..|+..+|+++|||++.+++.+.........+..+.+...........| +......+. .
T Consensus 107 ~~-------~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 178 (424)
T 2iya_A 107 DD-------RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAEEGA-E 178 (424)
T ss_dssp TS-------CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC---------------------
T ss_pred cc-------CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccccccccccccccccccccchhhh-c
Confidence 33 79999999998899999999999999998775421111000000000000000000000 000000000 0
Q ss_pred ccchhhhcCCCCChHHHHHHH------HHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCcccCCCCCC
Q 043304 157 QMSLSLRAADGSDSLSVLSKE------LFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTESRGGAGK 230 (454)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~ 230 (454)
..+. .... .........+ .......++++++|++++++++ ...+++++++|||+....
T Consensus 179 ~~~~-~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~~~vGp~~~~~-------- 242 (424)
T 2iya_A 179 AEDG-LVRF--FTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDTVGDNYTFVGPTYGDR-------- 242 (424)
T ss_dssp -HHH-HHHH--HHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GGGCCTTEEECCCCCCCC--------
T ss_pred cchh-HHHH--HHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----ccCCCCCEEEeCCCCCCc--------
Confidence 0000 0000 0000011110 0011125678999999999864 245778899999986432
Q ss_pred CCCCCccccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHh
Q 043304 231 EYGISAELCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEK 310 (454)
Q Consensus 231 ~~~~~~~~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~ 310 (454)
.+..+|++..+++++|||+|||+.....+++.+++++++..+.+++|.++... +. +.+
T Consensus 243 ------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~~---~~~------- 300 (424)
T 2iya_A 243 ------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFV------DP---ADL------- 300 (424)
T ss_dssp ------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTS------CG---GGG-------
T ss_pred ------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcC------Ch---HHh-------
Confidence 01346777655678999999999876788899999999988899999886532 00 101
Q ss_pred hccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcc
Q 043304 311 IKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCE 380 (454)
Q Consensus 311 ~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 380 (454)
...+.|+.+.+|+||.++|+|.+ +||| +++|||+|++|.+.||+.||+++++. |+|+.+.. ..
T Consensus 301 -~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~ 373 (424)
T 2iya_A 301 -GEVPPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRHIPR---DQ 373 (424)
T ss_dssp -CSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCG---GG
T ss_pred -ccCCCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC-CCEEEcCc---CC
Confidence 01156888889999999999987 6888 99999999999999999999999987 99999986 67
Q ss_pred cCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHH
Q 043304 381 VLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAAL 440 (454)
Q Consensus 381 ~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~ 440 (454)
++.++|.++|+++|+++ +++++++++++.++ ..+|. ..+.+.|+.+.
T Consensus 374 ~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~~--~~~~~~i~~~~ 420 (424)
T 2iya_A 374 VTAEKLREAVLAVASDP----GVAERLAAVRQEIR-------EAGGA--RAAADILEGIL 420 (424)
T ss_dssp CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCHH--HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hcCcH--HHHHHHHHHHH
Confidence 89999999999999887 79999999999987 44443 34445555544
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=1.4e-30 Score=262.57 Aligned_cols=352 Identities=14% Similarity=0.068 Sum_probs=221.3
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHhhchHHHHHHHHHHhh
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQASASLEPHFKKLISELVN 81 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~~ 81 (454)
++||+|||++++.+...+.. .|++|++++.. ..+....... . ....+...+ ...+.++++++..
T Consensus 26 ~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~-----~~~~~~~~~~-~--~~~~~~~~~---~~~~~~~~~~l~~ 89 (415)
T 1iir_A 26 DLGADVRMCAPPDCAERLAE-----VGVPHVPVGPS-----ARAPIQRAKP-L--TAEDVRRFT---TEAIATQFDEIPA 89 (415)
T ss_dssp HTTCEEEEEECGGGHHHHHH-----TTCCEEECCC------------CCSC-C--CHHHHHHHH---HHHHHHHHHHHHH
T ss_pred HCCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCC-----HHHHhhcccc-c--chHHHHHHH---HHHHHHHHHHHHH
Confidence 58999999999998888888 88999999852 1111111011 1 001111111 1122333333321
Q ss_pred ccCCCCCcEEEeCC-Ccch--HHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCcccccccc
Q 043304 82 EQNGQKPLCIITDS-FLGW--CKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHRKTDADKFLLPDFPEASTLHVTQM 158 (454)
Q Consensus 82 ~~~g~~~D~vI~D~-~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~p~~~~~~~~~l 158 (454)
. .. +|||||+|. +..| +..+|+++|||+|.++++++... ..+.|..... +.+++ . ...+.+
T Consensus 90 ~-~~-~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~------~~~~p~~~~~---~~~~~--~---~~~n~~ 153 (415)
T 1iir_A 90 A-AE-GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP------SPYYPPPPLG---EPSTQ--D---TIDIPA 153 (415)
T ss_dssp H-TT-TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC------CSSSCCCC-----------------CHHHH
T ss_pred H-hc-CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC------CcccCCccCC---ccccc--h---HHHHHH
Confidence 1 11 799999998 6678 89999999999999988764311 1111111000 11111 0 000000
Q ss_pred chhhhcCCCCChHHHHHHHH------------HhhhccCcEEEEcCchhhcH-HHHHHHHhhcCCCeEeeccCCCCcccC
Q 043304 159 SLSLRAADGSDSLSVLSKEL------------FLQWKDADGILVNTVEELDK-IGLMYFKRKFGRPVWPIGPVLLSTESR 225 (454)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~vl~ns~~~le~-~~~~~~~~~~~~~~~~vGpl~~~~~~~ 225 (454)
...+........+...+.+. .+..... .+++|+++.+++ + +..+ ++++|||+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~~~~--~~~~vG~~~~~~~-- 223 (415)
T 1iir_A 154 QWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----PTDL--DAVQTGAWILPDE-- 223 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----CCSS--CCEECCCCCCCCC--
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----cccC--CeEeeCCCccCcc--
Confidence 00000000000000000000 0111223 689999999885 2 1122 7999999976531
Q ss_pred CCCCCCCCCCccccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCCh
Q 043304 226 GGAGKEYGISAELCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQ 305 (454)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~ 305 (454)
+..+.++.+||++++ ++|||+|||+. .+.+.++.++++|++.+.+|+|+++... ... .
T Consensus 224 -------~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~-----------~~~-~ 281 (415)
T 1iir_A 224 -------RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWAD-----------LVL-P 281 (415)
T ss_dssp -------CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTT-----------CCC-S
T ss_pred -------cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCc-----------ccc-c
Confidence 234677899998763 59999999997 6778888999999999999999987542 101 0
Q ss_pred hHHHhhccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEec
Q 043304 306 GFEEKIKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVAR 375 (454)
Q Consensus 306 ~~~~~~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~ 375 (454)
..+.|+.+.+|+||.++| +++++||| +++|||+|++|.++||+.||+++++. |+|+.++.
T Consensus 282 -------~~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~ 351 (415)
T 1iir_A 282 -------DDGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-GVGVAHDG 351 (415)
T ss_dssp -------SCGGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSS
T ss_pred -------CCCCCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-CCcccCCc
Confidence 014578888999999999 56678999 99999999999999999999999887 99999876
Q ss_pred CCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHHHhhh
Q 043304 376 GLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAALIMRQ 444 (454)
Q Consensus 376 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~~~~~ 444 (454)
..++.++|.++|+++ +++ +|+++++++++.++ ..+| ...+.++|+++.+++.
T Consensus 352 ---~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~-------~~~~--~~~~~~~i~~~~~~~~ 403 (415)
T 1iir_A 352 ---PIPTFDSLSAALATA-LTP----ETHARATAVAGTIR-------TDGA--AVAARLLLDAVSREKP 403 (415)
T ss_dssp ---SSCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSC-------SCHH--HHHHHHHHHHHHTC--
T ss_pred ---CCCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHh-------hcCh--HHHHHHHHHHHHhccc
Confidence 678999999999999 776 79999999998875 3333 3466677777766543
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.97 E-value=3.7e-29 Score=250.35 Aligned_cols=163 Identities=18% Similarity=0.250 Sum_probs=126.0
Q ss_pred ccccccccCCCCCCceEEEecCCccCCC--HHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhcc
Q 043304 236 AELCKKWLDTKPYSSVLYVSFGSQNTIA--ASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKG 313 (454)
Q Consensus 236 ~~~~~~~l~~~~~~~vvyvsfGS~~~~~--~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 313 (454)
...+.+|++..+.+++|||||||+.... .+++.++++++++.+.+++|..++.. . .... .
T Consensus 224 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~------~----~~~~--------~ 285 (400)
T 4amg_A 224 GAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGD------L----ALLG--------E 285 (400)
T ss_dssp CEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTC------C----CCCC--------C
T ss_pred cccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcc------c----cccc--------c
Confidence 3445679988888899999999987543 46788899999999999999987542 0 1110 1
Q ss_pred CCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCH
Q 043304 314 SGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLK 383 (454)
Q Consensus 314 ~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 383 (454)
.+.|+.+.+|+||.++|.|.+ +||| +++|||+|++|+++||+.||+++++. |+|+.++. ...++
T Consensus 286 ~~~~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G~g~~l~~---~~~~~ 359 (400)
T 4amg_A 286 LPANVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-GIGFDAEA---GSLGA 359 (400)
T ss_dssp CCTTEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH-TSEEECCT---TTCSH
T ss_pred CCCCEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC-CCEEEcCC---CCchH
Confidence 166888899999999999876 6999 99999999999999999999999998 99999986 55655
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHH
Q 043304 384 EDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAA 439 (454)
Q Consensus 384 ~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~ 439 (454)
++|+++|+|+ +||+||+++++.++ ..+|.+ .+.+.|+.|
T Consensus 360 ----~al~~lL~d~----~~r~~a~~l~~~~~-------~~~~~~--~~a~~le~l 398 (400)
T 4amg_A 360 ----EQCRRLLDDA----GLREAALRVRQEMS-------EMPPPA--ETAAXLVAL 398 (400)
T ss_dssp ----HHHHHHHHCH----HHHHHHHHHHHHHH-------TSCCHH--HHHHHHHHH
T ss_pred ----HHHHHHHcCH----HHHHHHHHHHHHHH-------cCCCHH--HHHHHHHHh
Confidence 4677889888 89999999999998 555543 344555543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.96 E-value=2.6e-29 Score=253.25 Aligned_cols=354 Identities=14% Similarity=0.099 Sum_probs=222.2
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHhhchHHHHHHHHHHhh
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQASASLEPHFKKLISELVN 81 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~~ 81 (454)
++||+|||++++.+...+.. .|++|++++.. ..+..... ... + ....+...+. ..+.++++.+..
T Consensus 26 ~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~--~~~~~~~~--~~~-~--~~~~~~~~~~---~~~~~~~~~l~~ 90 (416)
T 1rrv_A 26 ALGVQTRMCAPPAAEERLAE-----VGVPHVPVGLP--QHMMLQEG--MPP-P--PPEEEQRLAA---MTVEMQFDAVPG 90 (416)
T ss_dssp HTTCEEEEEECGGGHHHHHH-----HTCCEEECSCC--GGGCCCTT--SCC-C--CHHHHHHHHH---HHHHHHHHHHHH
T ss_pred HCCCeEEEEeCHHHHHHHHH-----cCCeeeecCCC--HHHHHhhc--ccc-c--hhHHHHHHHH---HHHHHHHHHHHH
Confidence 58999999999998888888 78999998852 11111100 001 1 0011111111 122333333321
Q ss_pred ccCCCCCcEEEeCC-Ccch--HHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCCCCCCCcccc-CCCCCCccccccc
Q 043304 82 EQNGQKPLCIITDS-FLGW--CKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHRKTDADKFLL-PDFPEASTLHVTQ 157 (454)
Q Consensus 82 ~~~g~~~D~vI~D~-~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-p~~p~~~~~~~~~ 157 (454)
. ..+|||||+|. +.+| +..+|+++|||++.+++++.... ..+.| ... . +.+ +++..+ .....
T Consensus 91 ~--~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~------~~~~p-~~~--~-~~~~~~r~~n--~~~~~ 156 (416)
T 1rrv_A 91 A--AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA------SPHLP-PAY--D-EPTTPGVTDI--RVLWE 156 (416)
T ss_dssp H--TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC------CSSSC-CCB--C-SCCCTTCCCH--HHHHH
T ss_pred H--hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC------CcccC-CCC--C-CCCCchHHHH--HHHHH
Confidence 1 11799999997 4556 78999999999999887753210 01111 000 0 111 111110 00000
Q ss_pred -cchhhhcCCCCChHHHHHHH--------HHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCcccCCCC
Q 043304 158 -MSLSLRAADGSDSLSVLSKE--------LFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTESRGGA 228 (454)
Q Consensus 158 -l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~ 228 (454)
....+... ..........+ ..+..... .+++|+.++++++ ...+ ++++|||+.....
T Consensus 157 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-----~~~~--~~~~vG~~~~~~~----- 222 (416)
T 1rrv_A 157 ERAARFADR-YGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-----QPDV--DAVQTGAWLLSDE----- 222 (416)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----CSSC--CCEECCCCCCCCC-----
T ss_pred HHHHHHHHH-hHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----CCCC--CeeeECCCccCcc-----
Confidence 00000000 00000000000 01112233 7899999998853 1122 7999999986531
Q ss_pred CCCCCCCccccccccCCCCCCceEEEecCCccC-CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhH
Q 043304 229 GKEYGISAELCKKWLDTKPYSSVLYVSFGSQNT-IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGF 307 (454)
Q Consensus 229 ~~~~~~~~~~~~~~l~~~~~~~vvyvsfGS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~ 307 (454)
...+.++.+||++++ ++|||+|||+.. ...+.+.+++++++..+.+|+|+++... ... .
T Consensus 223 ----~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~-----------~~~-~-- 282 (416)
T 1rrv_A 223 ----RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTE-----------LVL-P-- 282 (416)
T ss_dssp ----CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTT-----------CCC-S--
T ss_pred ----CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcc-----------ccc-c--
Confidence 224677889998763 599999999864 4567788899999999999999987542 101 0
Q ss_pred HHhhccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCC
Q 043304 308 EEKIKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGL 377 (454)
Q Consensus 308 ~~~~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 377 (454)
..+.|+.+.+|+||.++| +++++||| +++|||+|++|.+.||+.||+++++. |+|+.+..
T Consensus 283 -----~~~~~v~~~~~~~~~~ll--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~-- 352 (416)
T 1rrv_A 283 -----DDRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDG-- 352 (416)
T ss_dssp -----CCCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-TSEEECSS--
T ss_pred -----CCCCCEEEeccCChHHHh--ccCCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-CCccCCCC--
Confidence 115678888999999999 55668999 99999999999999999999999987 99999876
Q ss_pred CcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHH-HHHHHhhh
Q 043304 378 TCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFL-NAALIMRQ 444 (454)
Q Consensus 378 ~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~-~~~~~~~~ 444 (454)
..++.++|.++|+++ +++ +|+++++++++.++ ..+| . .+.+++ +++.+++.
T Consensus 353 -~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~-------~~~~-~--~~~~~i~e~~~~~~~ 404 (416)
T 1rrv_A 353 -PTPTFESLSAALTTV-LAP----ETRARAEAVAGMVL-------TDGA-A--AAADLVLAAVGREKP 404 (416)
T ss_dssp -SCCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCC-------CCHH-H--HHHHHHHHHHHC---
T ss_pred -CCCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHh-------hcCc-H--HHHHHHHHHHhccCC
Confidence 578999999999999 877 79999999888775 3333 3 444555 77765543
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.95 E-value=2.6e-27 Score=237.75 Aligned_cols=343 Identities=15% Similarity=0.108 Sum_probs=215.4
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHhhchHHHHHHHHHHhh
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQASASLEPHFKKLISELVN 81 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~~ 81 (454)
++||+|+|++++.+...+++ .|+.|++++... +.+ .+.. ..........+...+... ++++.+.. .
T Consensus 26 ~~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~--~~~-~~~~--~~~~~~~~~~~~~~~~~~---~~~l~~~~-~ 91 (404)
T 3h4t_A 26 ELGADARMCLPPDYVERCAE-----VGVPMVPVGRAV--RAG-AREP--GELPPGAAEVVTEVVAEW---FDKVPAAI-E 91 (404)
T ss_dssp HTTCCEEEEECGGGHHHHHH-----TTCCEEECSSCS--SGG-GSCT--TCCCTTCGGGHHHHHHHH---HHHHHHHH-T
T ss_pred HCCCeEEEEeCHHHHHHHHH-----cCCceeecCCCH--HHH-hccc--cCCHHHHHHHHHHHHHHH---HHHHHHHh-c
Confidence 58999999999999999988 899999998531 111 0000 000000011122222222 22222222 1
Q ss_pred ccCCCCCcEEEeCCCcchH---HHHHHHhCCceEEEcchhHHHHHHHHH-hhhhCCCCCCCCCccccCCCCCCccccccc
Q 043304 82 EQNGQKPLCIITDSFLGWC---KETAQEYGIFHAIFIGGGGFGFACFYS-LWVNLPHRKTDADKFLLPDFPEASTLHVTQ 157 (454)
Q Consensus 82 ~~~g~~~D~vI~D~~~~~~---~~vA~~lgIP~v~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~p~~p~~~~~~~~~ 157 (454)
+||+||+|....++ ..+|+++|||++.+..++......++. .+.. .+......+.. ..+.
T Consensus 92 -----~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~----~~~~ 155 (404)
T 3h4t_A 92 -----GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDM-------YNQGADRLFGD----AVNS 155 (404)
T ss_dssp -----TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHH-------HHHHHHHHHHH----HHHH
T ss_pred -----CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHH-------HHHHHHHHhHH----HHHH
Confidence 59999999665544 688999999999887765321000000 0000 00000000000 0000
Q ss_pred cchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCcccCCCCCCCCCCCcc
Q 043304 158 MSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTESRGGAGKEYGISAE 237 (454)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~ 237 (454)
+...+. ....... .... ..+..+++..+.+.+. +++++++..+|+++.... ..+++
T Consensus 156 ~~~~lg-l~~~~~~---~~~~-----~~~~~l~~~~~~l~p~------~~~~~~~~~~G~~~~~~~---------~~~~~ 211 (404)
T 3h4t_A 156 HRASIG-LPPVEHL---YDYG-----YTDQPWLAADPVLSPL------RPTDLGTVQTGAWILPDQ---------RPLSA 211 (404)
T ss_dssp HHHHTT-CCCCCCH---HHHH-----HCSSCEECSCTTTSCC------CTTCCSCCBCCCCCCCCC---------CCCCH
T ss_pred HHHHcC-CCCCcch---hhcc-----ccCCeEEeeCcceeCC------CCCCCCeEEeCccccCCC---------CCCCH
Confidence 000000 0000000 0000 0122355665555432 345678889998865431 23567
Q ss_pred ccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCc
Q 043304 238 LCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQG 317 (454)
Q Consensus 238 ~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 317 (454)
++.+|++.. +++|||+|||+.. +.+.+..+++++++.++++||+.+... . ..+. .+.|
T Consensus 212 ~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~---------~-~~~~---------~~~~ 269 (404)
T 3h4t_A 212 ELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAG---------L-GRID---------EGDD 269 (404)
T ss_dssp HHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTT---------C-CCSS---------CCTT
T ss_pred HHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcc---------c-cccc---------CCCC
Confidence 888999864 4599999999987 778889999999999999999987542 0 1111 1568
Q ss_pred EEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHHHH
Q 043304 318 LVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLS 387 (454)
Q Consensus 318 ~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~ 387 (454)
+.+.+|+||.++|.+ +.+||| +++|||+|++|+++||+.||.++++. |+|+.+.. ..++.++|.
T Consensus 270 v~~~~~~~~~~ll~~--~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~---~~~~~~~l~ 343 (404)
T 3h4t_A 270 CLVVGEVNHQVLFGR--VAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDG---PTPTVESLS 343 (404)
T ss_dssp EEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSS---SSCCHHHHH
T ss_pred EEEecCCCHHHHHhh--CcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCc---CCCCHHHHH
Confidence 888899999999976 457888 99999999999999999999999998 99999986 678999999
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHHH
Q 043304 388 AKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAALI 441 (454)
Q Consensus 388 ~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~~ 441 (454)
++|+++|+ + +|+++++++++.++ . . +...+.++|+++.+
T Consensus 344 ~ai~~ll~-~----~~~~~~~~~~~~~~-------~--~-~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 344 AALATALT-P----GIRARAAAVAGTIR-------T--D-GTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHHHHTS-H----HHHHHHHHHHTTCC-------C--C-HHHHHHHHHHHHHH
T ss_pred HHHHHHhC-H----HHHHHHHHHHHHHh-------h--h-HHHHHHHHHHHHHh
Confidence 99999998 7 79999999998885 4 2 33445555555543
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.95 E-value=5.2e-26 Score=228.75 Aligned_cols=332 Identities=11% Similarity=0.057 Sum_probs=214.6
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCCCCCCC---CCCCCCCCcHHH-HHHHHhhchHHHHHHHH
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDLPPCTE---NTDSIPHHLFPR-FLQASASLEPHFKKLIS 77 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~l~~lL~ 77 (454)
++||+|+|++++.+...+++ .|+.|++++.+ ++.... .....+...+.. +......+.+.+.++++
T Consensus 46 ~~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 115 (415)
T 3rsc_A 46 RRGHRVSYVTAGGFAEPVRA-----AGATVVPYQSE-----IIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALD 115 (415)
T ss_dssp HTTCEEEEEECGGGHHHHHH-----TTCEEEECCCS-----TTTCCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HCCCEEEEEeCHHHHHHHHh-----cCCEEEecccc-----ccccccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999888 88999988842 221100 000011111111 22222233334444444
Q ss_pred HHhhccCCCCCcEEEeC-CCcchHHHHHHHhCCceEEEcchhHHHHH--H--HHHhhhhCCCCCCCCCccccCCCCCCcc
Q 043304 78 ELVNEQNGQKPLCIITD-SFLGWCKETAQEYGIFHAIFIGGGGFGFA--C--FYSLWVNLPHRKTDADKFLLPDFPEAST 152 (454)
Q Consensus 78 ~~~~~~~g~~~D~vI~D-~~~~~~~~vA~~lgIP~v~~~~~~~~~~~--~--~~~~~~~~p~~~~~~~~~~~p~~p~~~~ 152 (454)
+. +||+||+| .+..++..+|+++|||++.+.+....... . ..... + ....|....
T Consensus 116 ~~-------~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~-~------------~~~~p~~~~ 175 (415)
T 3rsc_A 116 GD-------VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTL-A------------GTIDPLDLP 175 (415)
T ss_dssp SS-------CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHH-H------------TCCCGGGCH
T ss_pred cc-------CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCccccccccccc-c------------ccCChhhHH
Confidence 43 89999999 77778889999999999988644211000 0 00000 0 000000000
Q ss_pred ccccccchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCcccCCCCCCCC
Q 043304 153 LHVTQMSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTESRGGAGKEY 232 (454)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~ 232 (454)
.....+............. .... ....+..++.+...++.. ...++.++.++||+....
T Consensus 176 ~~~~~~~~~~~~~g~~~~~----~~~~--~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~---------- 234 (415)
T 3rsc_A 176 VFRDTLRDLLAEHGLSRSV----VDCW--NHVEQLNLVFVPKAFQIA-----GDTFDDRFVFVGPCFDDR---------- 234 (415)
T ss_dssp HHHHHHHHHHHHTTCCCCH----HHHH--TCCCSEEEESSCTTTSTT-----GGGCCTTEEECCCCCCCC----------
T ss_pred HHHHHHHHHHHHcCCCCCh----hhhh--cCCCCeEEEEcCcccCCC-----cccCCCceEEeCCCCCCc----------
Confidence 0000000011111000000 0111 111266777776666643 445677899999987543
Q ss_pred CCCccccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhc
Q 043304 233 GISAELCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIK 312 (454)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 312 (454)
.+..+|+...+.+++|||++||......+.+..+++++++.+.+++|.++... +. +.+ .
T Consensus 235 ----~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~------~~---~~l--------~ 293 (415)
T 3rsc_A 235 ----RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQV------DP---AAL--------G 293 (415)
T ss_dssp ----GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTS------CG---GGG--------C
T ss_pred ----ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCC------Ch---HHh--------c
Confidence 12234554444567999999999877778899999999998899999887542 00 011 1
Q ss_pred cCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccC
Q 043304 313 GSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVL 382 (454)
Q Consensus 313 ~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 382 (454)
..+.|+.+.+|+||.++|.+.+ +||| +++|+|+|++|...||+.||.++++. |+|+.+.. +.++
T Consensus 294 ~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~~~---~~~~ 367 (415)
T 3rsc_A 294 DLPPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPG---EKAD 367 (415)
T ss_dssp CCCTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEECCG---GGCC
T ss_pred CCCCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEEccc---CCCC
Confidence 1156888889999999998876 5777 99999999999999999999999999 99999987 6789
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 043304 383 KEDLSAKIELAMNETEKGTDLRNKAKEVKVIIK 415 (454)
Q Consensus 383 ~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 415 (454)
.++|.++|+++|+++ +++++++++++.+.
T Consensus 368 ~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~ 396 (415)
T 3rsc_A 368 GDTLLAAVGAVAADP----ALLARVEAMRGHVR 396 (415)
T ss_dssp HHHHHHHHHHHHTCH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCH----HHHHHHHHHHHHHH
Confidence 999999999999988 89999999999987
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.94 E-value=2e-25 Score=223.11 Aligned_cols=332 Identities=15% Similarity=0.129 Sum_probs=212.0
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHH----HHHhhchHHHHHHHH
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFL----QASASLEPHFKKLIS 77 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~lL~ 77 (454)
++||+|||++++.+...+.. .|+.|++++.+ ++................+. .....+.+.+.++++
T Consensus 30 ~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 99 (402)
T 3ia7_A 30 RRGHRITYVTTPLFADEVKA-----AGAEVVLYKSE-----FDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEALG 99 (402)
T ss_dssp HTTCEEEEEECHHHHHHHHH-----TTCEEEECCCG-----GGTSSSSSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCCEEEEEcCHHHHHHHHH-----cCCEEEecccc-----cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57999999999998888888 88999988852 11110000001111111121 112222333444444
Q ss_pred HHhhccCCCCCcEEEeC-CCcchHHHHHHHhCCceEEEcchhHHHHHH----HHHhhhhCCCCCCCCCccccCCCCCCcc
Q 043304 78 ELVNEQNGQKPLCIITD-SFLGWCKETAQEYGIFHAIFIGGGGFGFAC----FYSLWVNLPHRKTDADKFLLPDFPEAST 152 (454)
Q Consensus 78 ~~~~~~~g~~~D~vI~D-~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~p~~p~~~~ 152 (454)
+. +||+||+| .+..++..+|+++|||+|.+.+....+... ....... ...|....
T Consensus 100 ~~-------~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 159 (402)
T 3ia7_A 100 DN-------PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNG-------------QRHPADVE 159 (402)
T ss_dssp TC-------CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHT-------------CCCGGGSH
T ss_pred cc-------CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccccccccc-------------ccChhhHH
Confidence 33 89999999 777889999999999999886442210000 0000000 00000000
Q ss_pred ccccccchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCcccCCCCCCCC
Q 043304 153 LHVTQMSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTESRGGAGKEY 232 (454)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~ 232 (454)
.....+............ ...... ...+..++.+..+++.. ...++.++.+|||+....
T Consensus 160 ~~~~~~~~~~~~~g~~~~----~~~~~~--~~~~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~---------- 218 (402)
T 3ia7_A 160 AVHSVLVDLLGKYGVDTP----VKEYWD--EIEGLTIVFLPKSFQPF-----AETFDERFAFVGPTLTGR---------- 218 (402)
T ss_dssp HHHHHHHHHHHTTTCCSC----HHHHHT--CCCSCEEESSCGGGSTT-----GGGCCTTEEECCCCCCC-----------
T ss_pred HHHHHHHHHHHHcCCCCC----hhhhhc--CCCCeEEEEcChHhCCc-----cccCCCCeEEeCCCCCCc----------
Confidence 000001011111100000 001111 11256666666666633 344677899999987543
Q ss_pred CCCccccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhc
Q 043304 233 GISAELCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIK 312 (454)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 312 (454)
.+..+|+...+.+++|||++||......+.+..+++++...+.+++|.+++.. +. +.+ .
T Consensus 219 ----~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~------~~---~~~--------~ 277 (402)
T 3ia7_A 219 ----DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFL------DP---AVL--------G 277 (402)
T ss_dssp -------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTS------CG---GGG--------C
T ss_pred ----ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcC------Ch---hhh--------C
Confidence 11234554444567999999999877778899999999988899999887541 00 011 1
Q ss_pred cCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccc-cccccchHHHHHHhhceeEEEecCCCccc
Q 043304 313 GSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPL-AGEQFYNSKLLEEEIGVCVEVARGLTCEV 381 (454)
Q Consensus 313 ~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~-~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 381 (454)
..+.|+.+.+|+||.++|+|.+ +||| +++|+|+|++|. ..||+.|+.++++. |+|+.+.. +.+
T Consensus 278 ~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~---~~~ 351 (402)
T 3ia7_A 278 PLPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRP---DQL 351 (402)
T ss_dssp SCCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCG---GGC
T ss_pred CCCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccC---CCC
Confidence 1156888889999999999876 5777 999999999999 99999999999998 99999987 678
Q ss_pred CHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 043304 382 LKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIK 415 (454)
Q Consensus 382 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 415 (454)
+.++|.++|+++|+++ +++++++++++.+.
T Consensus 352 ~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~ 381 (402)
T 3ia7_A 352 EPASIREAVERLAADS----AVRERVRRMQRDIL 381 (402)
T ss_dssp SHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH----HHHHHHHHHHHHHh
Confidence 9999999999999988 79999999999886
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.94 E-value=3e-25 Score=224.27 Aligned_cols=334 Identities=14% Similarity=0.125 Sum_probs=210.7
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHH----HHhhchHHHHHHHH
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQ----ASASLEPHFKKLIS 77 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~lL~ 77 (454)
++||+|||+++..+...+.. .|++|+++|. .++.+.......+ .+...++. ....+...+.++++
T Consensus 33 ~~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~ 101 (430)
T 2iyf_A 33 ARGHRVTYAIPPVFADKVAA-----TGPRPVLYHS-----TLPGPDADPEAWG-STLLDNVEPFLNDAIQALPQLADAYA 101 (430)
T ss_dssp HTTCEEEEEECGGGHHHHHT-----TSCEEEECCC-----CSCCTTSCGGGGC-SSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HCCCeEEEEeCHHHHHHHHh-----CCCEEEEcCC-----cCccccccccccc-hhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 47999999999998777777 7899998874 2222221100001 11122221 12233344444444
Q ss_pred HHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCccccccc
Q 043304 78 ELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHRKTDADKFLLPDFPEASTLHVTQ 157 (454)
Q Consensus 78 ~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~p~~~~~~~~~ 157 (454)
+. +||+||+|.+..|+..+|+++|||+|.+++....... +...... +. .. .....+.. ......
T Consensus 102 ~~-------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~~~~~-~~----~~--~~~~~~~~-~~~~~~ 165 (430)
T 2iyf_A 102 DD-------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEEEVAE-PM----WR--EPRQTERG-RAYYAR 165 (430)
T ss_dssp TS-------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHHHTHH-HH----HH--HHHHSHHH-HHHHHH
T ss_pred cc-------CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-ccccccc-ch----hh--hhccchHH-HHHHHH
Confidence 43 7999999988778999999999999998865421000 0000000 00 00 00000000 000000
Q ss_pred cchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCC-eEeeccCCCCcccCCCCCCCCCCCc
Q 043304 158 MSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKFGRP-VWPIGPVLLSTESRGGAGKEYGISA 236 (454)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~-~~~vGpl~~~~~~~~~~~~~~~~~~ 236 (454)
+...+......... ......++.+++++.+.++.. ...++++ +++|||++....
T Consensus 166 ~~~~~~~~g~~~~~-------~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~v~~vG~~~~~~~------------- 220 (430)
T 2iyf_A 166 FEAWLKENGITEHP-------DTFASHPPRSLVLIPKALQPH-----ADRVDEDVYTFVGACQGDRA------------- 220 (430)
T ss_dssp HHHHHHHTTCCSCH-------HHHHHCCSSEEECSCGGGSTT-----GGGSCTTTEEECCCCC-----------------
T ss_pred HHHHHHHhCCCCCH-------HHHhcCCCcEEEeCcHHhCCC-----cccCCCccEEEeCCcCCCCC-------------
Confidence 00001000000000 011124678999998888753 2346677 999998754320
Q ss_pred cccccccCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhC-CCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCC
Q 043304 237 ELCKKWLDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEAS-GKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSG 315 (454)
Q Consensus 237 ~~~~~~l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~-~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 315 (454)
+..+|++..+++++||+++||+.....+.+.+++++++.. +.+++|.++... +. +.+ ...+
T Consensus 221 -~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~------~~---~~l--------~~~~ 282 (430)
T 2iyf_A 221 -EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKV------TP---AEL--------GELP 282 (430)
T ss_dssp --CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---------CG---GGG--------CSCC
T ss_pred -CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCC------Ch---HHh--------ccCC
Confidence 1234665444567999999999865678889999999885 889989886431 00 111 1115
Q ss_pred CcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHH
Q 043304 316 QGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKED 385 (454)
Q Consensus 316 ~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~ 385 (454)
.|+.+.+|+||.++|+|.+ +||+ +++|+|+|++|..+||..|+.++++. |+|+.+.. +.++.++
T Consensus 283 ~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~~---~~~~~~~ 356 (430)
T 2iyf_A 283 DNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLAT---EEATADL 356 (430)
T ss_dssp TTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCC---C-CCHHH
T ss_pred CCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCEEEcCC---CCCCHHH
Confidence 6888889999999999987 5888 99999999999999999999999987 99999876 5789999
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 043304 386 LSAKIELAMNETEKGTDLRNKAKEVKVIIK 415 (454)
Q Consensus 386 l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 415 (454)
|+++|+++|+++ ++++++.++++.+.
T Consensus 357 l~~~i~~ll~~~----~~~~~~~~~~~~~~ 382 (430)
T 2iyf_A 357 LRETALALVDDP----EVARRLRRIQAEMA 382 (430)
T ss_dssp HHHHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCH----HHHHHHHHHHHHHH
Confidence 999999999887 79999998888876
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.93 E-value=7.7e-25 Score=222.26 Aligned_cols=169 Identities=14% Similarity=0.170 Sum_probs=128.9
Q ss_pred cccccccCCCCCCceEEEecCCccCC---CHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhcc
Q 043304 237 ELCKKWLDTKPYSSVLYVSFGSQNTI---AASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKG 313 (454)
Q Consensus 237 ~~~~~~l~~~~~~~vvyvsfGS~~~~---~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 313 (454)
.++.+|++..+++++|||++||+... ..+.+..+++++...+.++||+.++.. . +.+. .
T Consensus 255 ~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~---------~-~~l~--------~ 316 (441)
T 2yjn_A 255 SVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQ---------L-EGVA--------N 316 (441)
T ss_dssp CCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTT---------T-SSCS--------S
T ss_pred cccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcc---------h-hhhc--------c
Confidence 34678998655567999999998753 345677889999989999999987431 0 1121 1
Q ss_pred CCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCH
Q 043304 314 SGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLK 383 (454)
Q Consensus 314 ~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 383 (454)
.+.|+.+.+|+||.++|.+ +.+||| +++|||+|++|.+.||+.||.++++. |+|+.+.. ..++.
T Consensus 317 ~~~~v~~~~~~~~~~ll~~--ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~ 390 (441)
T 2yjn_A 317 IPDNVRTVGFVPMHALLPT--CAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPV---PELTP 390 (441)
T ss_dssp CCSSEEECCSCCHHHHGGG--CSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT---TTCCH
T ss_pred CCCCEEEecCCCHHHHHhh--CCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccc---ccCCH
Confidence 1568888999999999954 557888 99999999999999999999999998 99999886 67899
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHHHh
Q 043304 384 EDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAALIM 442 (454)
Q Consensus 384 ~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~~~ 442 (454)
++|.++|+++|+++ +++++++++++.++ ..+|. ..+.+.|+.+...
T Consensus 391 ~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~~--~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 391 DQLRESVKRVLDDP----AHRAGAARMRDDML-------AEPSP--AEVVGICEELAAG 436 (441)
T ss_dssp HHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCCH--HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCH----HHHHHHHHHHHHHH-------cCCCH--HHHHHHHHHHHHh
Confidence 99999999999988 79999999999987 44442 3455555655543
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.93 E-value=2.7e-24 Score=214.00 Aligned_cols=324 Identities=13% Similarity=0.062 Sum_probs=212.2
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCC--------CCCCCCCCCCCCCCcHHHHH-HH-----Hhh
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHD--------LPPCTENTDSIPHHLFPRFL-QA-----SAS 67 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dg--------l~~~~~~~~~~~~~~~~~~~-~~-----~~~ 67 (454)
++||+|||++++.+...+.. .|+.|++++... .++ ++... + +.......+ .. ...
T Consensus 26 ~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~-~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~ 94 (384)
T 2p6p_A 26 NAGHQVVMAANQDMGPVVTG-----VGLPAVATTDLP-IRHFITTDREGRPEAI----P-SDPVAQARFTGRWFARMAAS 94 (384)
T ss_dssp HTTCEEEEEECGGGHHHHHH-----TTCCEEESCSSC-HHHHHHBCTTSCBCCC----C-CSHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcc-hHHHHhhhcccCcccc----C-cchHHHHHHHHHHHHhhHHH
Confidence 47999999999988777777 789999887421 000 11000 0 100111111 11 122
Q ss_pred chHHHHHHHHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCCCCCCCccccCCC
Q 043304 68 LEPHFKKLISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHRKTDADKFLLPDF 147 (454)
Q Consensus 68 ~~~~l~~lL~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~ 147 (454)
....+.+++++. +||+||+|.+..|+..+|+.+|||++.+...+.. ..++
T Consensus 95 ~~~~l~~~l~~~-------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-----------------------~~~~ 144 (384)
T 2p6p_A 95 SLPRMLDFSRAW-------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-----------------------ADGI 144 (384)
T ss_dssp HHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-----------------------CTTT
T ss_pred HHHHHHHHHhcc-------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-----------------------cchh
Confidence 334455555555 8999999988888889999999999987633100 0000
Q ss_pred CCCccccccccchhhhcCCCCChHHHHHHHHH-hhhccCcEEEEcCchhhcHHHHHHHHhhcC-CCeEeeccCCCCcccC
Q 043304 148 PEASTLHVTQMSLSLRAADGSDSLSVLSKELF-LQWKDADGILVNTVEELDKIGLMYFKRKFG-RPVWPIGPVLLSTESR 225 (454)
Q Consensus 148 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vl~ns~~~le~~~~~~~~~~~~-~~~~~vGpl~~~~~~~ 225 (454)
. ..+. ........+.. .....++.+++++.+.++.+ ..++ .++.++++ .
T Consensus 145 ------~-----~~~~-----~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~----~--- 195 (384)
T 2p6p_A 145 ------H-----PGAD-----AELRPELSELGLERLPAPDLFIDICPPSLRPA------NAAPARMMRHVAT----S--- 195 (384)
T ss_dssp ------H-----HHHH-----HHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------TSCCCEECCCCCC----C---
T ss_pred ------h-----HHHH-----HHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------CCCCCCceEecCC----C---
Confidence 0 0000 00000111100 00111568899998877743 1121 12222211 0
Q ss_pred CCCCCCCCCCccccccccCCCCCCceEEEecCCccCC-----CHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhc
Q 043304 226 GGAGKEYGISAELCKKWLDTKPYSSVLYVSFGSQNTI-----AASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAK 300 (454)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~~~~~~~vvyvsfGS~~~~-----~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~ 300 (454)
.+.++.+|++..+++++|||+|||+... +.+.+..++++|++.+.+++|+.+++.
T Consensus 196 ---------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~----------- 255 (384)
T 2p6p_A 196 ---------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTV----------- 255 (384)
T ss_dssp ---------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHH-----------
T ss_pred ---------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCC-----------
Confidence 1234667887644567999999999764 457788999999999999999875310
Q ss_pred cCCChhHHHhhccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhcee
Q 043304 301 EWLPQGFEEKIKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVC 370 (454)
Q Consensus 301 ~~l~~~~~~~~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G 370 (454)
. +.+. .+ +.|+.+ +|+||.++|.+ +.+||| +++|||+|++|...||+.|+.++++. |+|
T Consensus 256 --~-~~l~-~~---~~~v~~-~~~~~~~~l~~--~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g~g 324 (384)
T 2p6p_A 256 --A-EALR-AE---VPQARV-GWTPLDVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-GAA 324 (384)
T ss_dssp --H-HHHH-HH---CTTSEE-ECCCHHHHGGG--CSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSE
T ss_pred --H-HhhC-CC---CCceEE-cCCCHHHHHhh--CCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-CCe
Confidence 0 1111 11 568888 99999999965 458888 99999999999999999999999988 999
Q ss_pred EEEecCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHHHHHh
Q 043304 371 VEVARGLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNAALIM 442 (454)
Q Consensus 371 ~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~~~~~ 442 (454)
+.+.. ..++.++|.++|+++|+++ +++++++++++.++ ..+|. ..+.++|+.+.-+
T Consensus 325 ~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~~--~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 325 IALLP---GEDSTEAIADSCQELQAKD----TYARRAQDLSREIS-------GMPLP--ATVVTALEQLAHH 380 (384)
T ss_dssp EECCT---TCCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCCH--HHHHHHHHHHHHH
T ss_pred EecCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hCCCH--HHHHHHHHHHhhh
Confidence 99876 5789999999999999987 79999999999998 55443 3455666666544
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.88 E-value=6.2e-21 Score=190.72 Aligned_cols=304 Identities=12% Similarity=0.094 Sum_probs=195.3
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCC--------C--------CCCCCCCCCCCCcHHHHH-HH
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDL--------P--------PCTENTDSIPHHLFPRFL-QA 64 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl--------~--------~~~~~~~~~~~~~~~~~~-~~ 64 (454)
++||+|+++++ .+...+.. .|+.|++++...+...+ + .... . ......++ ..
T Consensus 46 ~~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~ 114 (398)
T 3oti_A 46 TAGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPAI---D--LEEWGVQIAAV 114 (398)
T ss_dssp HTTCEEEEEES-SCHHHHHT-----TTCEEEESSTTCCHHHHHHHHHHHCHHHHHTGGGSCCC---S--GGGGHHHHHHH
T ss_pred HCCCEEEEecc-chHHHHHh-----CCCeeEecCCccCHHHHhhhcccCCccccccccCChhh---h--HHHHHHHHHHH
Confidence 47999999999 88888888 89999988842100000 0 0000 0 01122232 23
Q ss_pred HhhchHHHHHHHHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCCCCCCCcccc
Q 043304 65 SASLEPHFKKLISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHRKTDADKFLL 144 (454)
Q Consensus 65 ~~~~~~~l~~lL~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 144 (454)
...+...+.+++++. +||+||+|....++..+|+.+|||+|.+...... .
T Consensus 115 ~~~~~~~l~~~l~~~-------~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~-----------------------~ 164 (398)
T 3oti_A 115 NRPLVDGTMALVDDY-------RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR-----------------------T 164 (398)
T ss_dssp HGGGHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC-----------------------C
T ss_pred HHHHHHHHHHHHHHc-------CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC-----------------------c
Confidence 356667788888887 8999999988888889999999999976533100 0
Q ss_pred CCCCCCccccccccchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCccc
Q 043304 145 PDFPEASTLHVTQMSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTES 224 (454)
Q Consensus 145 p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~ 224 (454)
..+.. .... .......+........+..+..+...+..+ .......+... +.
T Consensus 165 ~~~~~-----------~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~--- 216 (398)
T 3oti_A 165 RGMHR-----------SIAS-----FLTDLMDKHQVSLPEPVATIESFPPSLLLE--------AEPEGWFMRWV-PY--- 216 (398)
T ss_dssp TTHHH-----------HHHT-----TCHHHHHHTTCCCCCCSEEECSSCGGGGTT--------SCCCSBCCCCC-CC---
T ss_pred cchhh-----------HHHH-----HHHHHHHHcCCCCCCCCeEEEeCCHHHCCC--------CCCCCCCcccc-CC---
Confidence 00000 0000 000011110000112233443333333311 00011111100 00
Q ss_pred CCCCCCCCCCCccccccccCCCCCCceEEEecCCccCC--CHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccC
Q 043304 225 RGGAGKEYGISAELCKKWLDTKPYSSVLYVSFGSQNTI--AASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEW 302 (454)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvsfGS~~~~--~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~ 302 (454)
..+..+.+|+...+.+++|||++||.... ..+.+..++++|++.+.+++|+.++.. . +.
T Consensus 217 ---------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~------~----~~ 277 (398)
T 3oti_A 217 ---------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD------I----SP 277 (398)
T ss_dssp ---------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC------C----GG
T ss_pred ---------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC------h----hh
Confidence 01234556776555567999999999642 567788899999999999999987542 0 11
Q ss_pred CChhHHHhhccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchH--HHHHHhhcee
Q 043304 303 LPQGFEEKIKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNS--KLLEEEIGVC 370 (454)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na--~~~~~~~g~G 370 (454)
+. ..+.|+.+.+|+|+.++|.|.. +||| +++|||+|++|+..||..|+ .++++. |+|
T Consensus 278 l~--------~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~-g~g 346 (398)
T 3oti_A 278 LG--------TLPRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR-GIG 346 (398)
T ss_dssp GC--------SCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH-TSE
T ss_pred hc--------cCCCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC-CCE
Confidence 11 1156888999999999999865 7888 99999999999999999999 999998 999
Q ss_pred EEEecCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 043304 371 VEVARGLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIK 415 (454)
Q Consensus 371 ~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 415 (454)
+.++. ...+.+.|. ++|+++ +++++++++++.+.
T Consensus 347 ~~~~~---~~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~ 380 (398)
T 3oti_A 347 LVSTS---DKVDADLLR----RLIGDE----SLRTAAREVREEMV 380 (398)
T ss_dssp EECCG---GGCCHHHHH----HHHHCH----HHHHHHHHHHHHHH
T ss_pred EeeCC---CCCCHHHHH----HHHcCH----HHHHHHHHHHHHHH
Confidence 99987 667777776 788887 89999999999987
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.88 E-value=1.7e-21 Score=194.82 Aligned_cols=316 Identities=13% Similarity=0.093 Sum_probs=184.9
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCCCC--CCCCCCCCCCCc---HHHH---HH-HHhhchHHH
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDLPP--CTENTDSIPHHL---FPRF---LQ-ASASLEPHF 72 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl~~--~~~~~~~~~~~~---~~~~---~~-~~~~~~~~l 72 (454)
++||+|++++++.+...+.. .|+.|++++...+...+.. ........+... ...+ +. ....+...+
T Consensus 41 ~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (398)
T 4fzr_A 41 AAGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEA 115 (398)
T ss_dssp HTTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999988888888 8899998874211000000 000000011100 0111 11 113344456
Q ss_pred HHHHHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCcc
Q 043304 73 KKLISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHRKTDADKFLLPDFPEAST 152 (454)
Q Consensus 73 ~~lL~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~p~~~~ 152 (454)
.+++++. +||+||+|....++..+|+.+|||++.+................
T Consensus 116 ~~~~~~~-------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~~~~---------------------- 166 (398)
T 4fzr_A 116 LALAERW-------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSAGVG---------------------- 166 (398)
T ss_dssp HHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHHHHH----------------------
T ss_pred HHHHHhC-------CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHHHHH----------------------
Confidence 6666666 89999999877888899999999999876442110000000000
Q ss_pred ccccccchhhhcCCCCChHHHHHHHHHhhhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCcccCCCCCCCC
Q 043304 153 LHVTQMSLSLRAADGSDSLSVLSKELFLQWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLSTESRGGAGKEY 232 (454)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~ 232 (454)
.+...+.... .......+..+..+...+... .. .....+......
T Consensus 167 ----~l~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~----------- 211 (398)
T 4fzr_A 167 ----ELAPELAELG------------LTDFPDPLLSIDVCPPSMEAQ-----PK---PGTTKMRYVPYN----------- 211 (398)
T ss_dssp ----HTHHHHHTTT------------CSSCCCCSEEEECSCGGGC------------CCCEECCCCCCC-----------
T ss_pred ----HHHHHHHHcC------------CCCCCCCCeEEEeCChhhCCC-----CC---CCCCCeeeeCCC-----------
Confidence 0000000000 000111234444444444422 00 111111111000
Q ss_pred CCCccccccccCCCCCCceEEEecCCccCC--------CHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCC
Q 043304 233 GISAELCKKWLDTKPYSSVLYVSFGSQNTI--------AASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLP 304 (454)
Q Consensus 233 ~~~~~~~~~~l~~~~~~~vvyvsfGS~~~~--------~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~ 304 (454)
....++.+|+...+.+++|||++||+... ..+.+..+++++.+.+.+++|+.++.. . +.+.
T Consensus 212 -~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~---------~-~~l~ 280 (398)
T 4fzr_A 212 -GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKL---------A-QTLQ 280 (398)
T ss_dssp -CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----------------
T ss_pred -CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcc---------h-hhhc
Confidence 01223456665544567999999999642 345678899999988999999876431 0 1111
Q ss_pred hhHHHhhccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEe
Q 043304 305 QGFEEKIKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVA 374 (454)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 374 (454)
..+.|+.+.+|+|+.++|.|.. +||| +++|||+|++|...||+.|+.++++. |+|+.+.
T Consensus 281 --------~~~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~ 349 (398)
T 4fzr_A 281 --------PLPEGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVP 349 (398)
T ss_dssp ---------CCTTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC
T ss_pred --------cCCCcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecC
Confidence 1156888889999999999865 6888 99999999999999999999999999 9999998
Q ss_pred cCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 043304 375 RGLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIK 415 (454)
Q Consensus 375 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 415 (454)
. ..++.++|.++|+++|+++ ++++++++.++.+.
T Consensus 350 ~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 350 W---EQAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp ----------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred c---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 7 6789999999999999998 89999999998885
No 18
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.85 E-value=3.7e-21 Score=169.07 Aligned_cols=153 Identities=22% Similarity=0.378 Sum_probs=130.2
Q ss_pred CCccccccccCCCCCCceEEEecCCcc-CCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhc
Q 043304 234 ISAELCKKWLDTKPYSSVLYVSFGSQN-TIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIK 312 (454)
Q Consensus 234 ~~~~~~~~~l~~~~~~~vvyvsfGS~~-~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 312 (454)
.++.++.+|++..+++++|||+|||.. ..+.+.+..++++|++.+.+++|+.++.. . ..+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~---------~-~~~--------- 66 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK---------P-DTL--------- 66 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC---------C-TTC---------
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC---------c-ccC---------
Confidence 467889999987666679999999996 46788889999999988899999986431 0 112
Q ss_pred cCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccC
Q 043304 313 GSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVL 382 (454)
Q Consensus 313 ~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 382 (454)
+.|+.+.+|+||.++|.|+++.+||| +++|+|+|++|...||..|+.++++. |+|+.++. ..++
T Consensus 67 --~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~---~~~~ 140 (170)
T 2o6l_A 67 --GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF---NTMS 140 (170)
T ss_dssp --CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT---TTCC
T ss_pred --CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc---ccCC
Confidence 45788889999999999999999999 99999999999999999999999988 99999986 6789
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 043304 383 KEDLSAKIELAMNETEKGTDLRNKAKEVKVIIK 415 (454)
Q Consensus 383 ~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 415 (454)
.++|.++|+++++++ +|+++++++++.++
T Consensus 141 ~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 141 STDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred HHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 999999999999887 79999999999886
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.84 E-value=9.7e-20 Score=181.40 Aligned_cols=312 Identities=13% Similarity=0.094 Sum_probs=192.0
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEc-cCCCCCCCC-----CCCCCCCCCCCCCcHHHHHHHH-hhc------
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEI-PFNSIEHDL-----PPCTENTDSIPHHLFPRFLQAS-ASL------ 68 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~i-p~~~~~dgl-----~~~~~~~~~~~~~~~~~~~~~~-~~~------ 68 (454)
++||+|++++++.+...+.. .|+.++++ +.+.+.+.. +.................+..+ ..+
T Consensus 27 ~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (391)
T 3tsa_A 27 ASGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLD 101 (391)
T ss_dssp HTTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhcccccccccccccchhHHHHHHHHHHHHhhcchh
Confidence 58999999999888877888 88999988 432111110 0000000000001111222222 233
Q ss_pred -hHHHHHHHHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCCCCCCCccccCCC
Q 043304 69 -EPHFKKLISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHRKTDADKFLLPDF 147 (454)
Q Consensus 69 -~~~l~~lL~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~ 147 (454)
...+.+++++. +||+||+|.+..++..+|+.+|||++.+.......
T Consensus 102 ~~~~l~~~l~~~-------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~-------------------------- 148 (391)
T 3tsa_A 102 QLPEYLRLAEAW-------RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT-------------------------- 148 (391)
T ss_dssp HHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT--------------------------
T ss_pred hHHHHHHHHHhc-------CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc--------------------------
Confidence 55566777776 89999999877778888999999999875332100
Q ss_pred CCCccccccccchhhhcCCCCChHHHHHHHHHhhh-----ccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeeccCCCCc
Q 043304 148 PEASTLHVTQMSLSLRAADGSDSLSVLSKELFLQW-----KDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGPVLLST 222 (454)
Q Consensus 148 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGpl~~~~ 222 (454)
.. .... .......+..... ...+.++..+..+++.. ......++.++ |.
T Consensus 149 ~~-------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-p~---- 202 (391)
T 3tsa_A 149 AG-------PFSD---------RAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS-----DAPQGAPVQYV-PY---- 202 (391)
T ss_dssp TT-------HHHH---------HHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-----TSCCCEECCCC-CC----
T ss_pred cc-------cccc---------hHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-----CCCccCCeeee-cC----
Confidence 00 0000 0000011111111 11244454444444321 00000011111 10
Q ss_pred ccCCCCCCCCCCCccccccccCCCCCCceEEEecCCccC---CCHHHHHHHHHHHHhC-CCceEEEEcCCCCCCCCchhh
Q 043304 223 ESRGGAGKEYGISAELCKKWLDTKPYSSVLYVSFGSQNT---IAASQMMQLAMALEAS-GKNFIWVVRPPIGFDINSEFK 298 (454)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvyvsfGS~~~---~~~~~~~~~~~al~~~-~~~~lw~~~~~~~~~~~~~~~ 298 (454)
..+..+.+|+...+.+++||+++||... .+.+.+..++++ ++. +.+++|+.+++. .
T Consensus 203 -----------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~--------~ 262 (391)
T 3tsa_A 203 -----------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH--------R 262 (391)
T ss_dssp -----------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG--------G
T ss_pred -----------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc--------h
Confidence 0122345677655556799999999853 347778888888 877 788999875431 0
Q ss_pred hccCCChhHHHhhccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHhhc
Q 043304 299 AKEWLPQGFEEKIKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEEIG 368 (454)
Q Consensus 299 ~~~~l~~~~~~~~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~~g 368 (454)
+.+. ..+.|+.+.+|+|+.++|.+. .+||| +++|+|+|++|...||+.|+.++++. |
T Consensus 263 --~~l~--------~~~~~v~~~~~~~~~~ll~~a--d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g 329 (391)
T 3tsa_A 263 --ALLT--------DLPDNARIAESVPLNLFLRTC--ELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-G 329 (391)
T ss_dssp --GGCT--------TCCTTEEECCSCCGGGTGGGC--SEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-T
T ss_pred --hhcc--------cCCCCEEEeccCCHHHHHhhC--CEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-C
Confidence 1121 115688888999999999554 47887 99999999999999999999999999 9
Q ss_pred eeEEEecCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 043304 369 VCVEVARGLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIK 415 (454)
Q Consensus 369 ~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 415 (454)
+|+.+... ....+.+.|.++|+++|+++ +++++++++++.+.
T Consensus 330 ~g~~~~~~-~~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 371 (391)
T 3tsa_A 330 AGICLPDE-QAQSDHEQFTDSIATVLGDT----GFAAAAIKLSDEIT 371 (391)
T ss_dssp SEEECCSH-HHHTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHH
T ss_pred CEEecCcc-cccCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH
Confidence 99988530 02378999999999999998 89999999998886
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.82 E-value=2.3e-18 Score=172.46 Aligned_cols=311 Identities=14% Similarity=0.142 Sum_probs=198.6
Q ss_pred CCCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCC------------CCCCCCCCCCCCCCCCCCcHHHHHHH--Hhh
Q 043304 2 LQSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNS------------IEHDLPPCTENTDSIPHHLFPRFLQA--SAS 67 (454)
Q Consensus 2 ~rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~------------~~dgl~~~~~~~~~~~~~~~~~~~~~--~~~ 67 (454)
++||+|++++++.+...+.. .|+.++.++... ...+.+. ....... .....++.. ...
T Consensus 46 ~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~ 117 (412)
T 3otg_A 46 AAGHEVTFATGEGFAGTLRK-----LGFEPVATGMPVFDGFLAALRIRFDTDSPEG-LTPEQLS--ELPQIVFGRVIPQR 117 (412)
T ss_dssp HTTCEEEEEECGGGHHHHHH-----TTCEEEECCCCHHHHHHHHHHHHHSCSCCTT-CCHHHHT--TSHHHHHHTHHHHH
T ss_pred HCCCEEEEEccHHHHHHHHh-----cCCceeecCcccccchhhhhhhhhcccCCcc-CChhHhh--HHHHHHHhccchHH
Confidence 47999999999887777777 889999888300 0000000 0000000 011112211 123
Q ss_pred chHHHHHHHHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHHHHHHHHHhhhhCCCCCCCCCccccCCC
Q 043304 68 LEPHFKKLISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGFGFACFYSLWVNLPHRKTDADKFLLPDF 147 (454)
Q Consensus 68 ~~~~l~~lL~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~ 147 (454)
+...+.+++++. +||+||+|....++..+|+.+|||+|.+....... ++.
T Consensus 118 ~~~~l~~~l~~~-------~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~-----------------------~~~ 167 (412)
T 3otg_A 118 VFDELQPVIERL-------RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP-----------------------DDL 167 (412)
T ss_dssp HHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC-----------------------SHH
T ss_pred HHHHHHHHHHhc-------CCCEEEECchhhHHHHHHHHcCCCEEEecccccCc-----------------------hhh
Confidence 345666777776 89999999877777888999999998864432100 000
Q ss_pred CCCccccccccchhhhcCCCCChHHHHHHHHHh----------hhccCcEEEEcCchhhcHHHHHHHHhhcCCCeEeecc
Q 043304 148 PEASTLHVTQMSLSLRAADGSDSLSVLSKELFL----------QWKDADGILVNTVEELDKIGLMYFKRKFGRPVWPIGP 217 (454)
Q Consensus 148 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~~vGp 217 (454)
.. .....+.+... ....++.++..+...++.. ...+.....++-+
T Consensus 168 -------~~-------------~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~-----~~~~~~~~~~~~~ 222 (412)
T 3otg_A 168 -------TR-------------SIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEP-----EFRARPRRHELRP 222 (412)
T ss_dssp -------HH-------------HHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCH-----HHHTCTTEEECCC
T ss_pred -------hH-------------HHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCC-----cccCCCCcceeec
Confidence 00 00000000000 0123455666665555532 1122222222111
Q ss_pred CCCCcccCCCCCCCCCCCccccccc-cCCCCCCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCch
Q 043304 218 VLLSTESRGGAGKEYGISAELCKKW-LDTKPYSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSE 296 (454)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~ 296 (454)
.... ......+| ....+.+.+||+++||......+.+.++++++.+.+.+++|..++.. .
T Consensus 223 ~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~------~ 283 (412)
T 3otg_A 223 VPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSL------D 283 (412)
T ss_dssp CCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSC------C
T ss_pred cCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCC------C
Confidence 1110 11234455 22223456999999999766788899999999988999999987542 0
Q ss_pred hhhccCCChhHHHhhccCCCcEEEecccchHHHhcccCcceeEE----------EecCCceeeccccccccchHHHHHHh
Q 043304 297 FKAKEWLPQGFEEKIKGSGQGLVVHKWAPQVEILSHRTISAFLT----------LSHGVPIIGWPLAGEQFYNSKLLEEE 366 (454)
Q Consensus 297 ~~~~~~l~~~~~~~~~~~~~~~~~~~w~pq~~vL~h~~vg~fvt----------l~~GvP~l~~P~~~DQ~~na~~~~~~ 366 (454)
. +.+. ..+.++.+.+|+|+.++|++.. +||+ +++|+|+|++|...||..|+..+++.
T Consensus 284 ~---~~l~--------~~~~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~ 350 (412)
T 3otg_A 284 V---SGLG--------EVPANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA 350 (412)
T ss_dssp C---TTCC--------CCCTTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH
T ss_pred h---hhhc--------cCCCcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc
Confidence 0 1111 1156888889999999999877 6777 99999999999999999999999998
Q ss_pred hceeEEEecCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 043304 367 IGVCVEVARGLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIK 415 (454)
Q Consensus 367 ~g~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 415 (454)
|+|+.+.. +.++.++|.++|+++|+++ ++++++.+.++.+.
T Consensus 351 -g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 391 (412)
T 3otg_A 351 -GAGDHLLP---DNISPDSVSGAAKRLLAEE----SYRAGARAVAAEIA 391 (412)
T ss_dssp -TSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred -CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHh
Confidence 99999987 6789999999999999988 79999988888876
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.54 E-value=1.1e-12 Score=129.43 Aligned_cols=127 Identities=15% Similarity=0.097 Sum_probs=90.4
Q ss_pred CceEEEecCCccCCCHHHHHHHHHHHHhC----CCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEeccc
Q 043304 249 SSVLYVSFGSQNTIAASQMMQLAMALEAS----GKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKWA 324 (454)
Q Consensus 249 ~~vvyvsfGS~~~~~~~~~~~~~~al~~~----~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~ 324 (454)
+.+|+|..||..... ..+.+.+++... +..++|..+... .+...++.+..+.++.+.+|+
T Consensus 180 ~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~--------------~~~~~~~~~~~~~~~~v~~f~ 243 (365)
T 3s2u_A 180 RVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH--------------AEITAERYRTVAVEADVAPFI 243 (365)
T ss_dssp CCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT--------------HHHHHHHHHHTTCCCEEESCC
T ss_pred CcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc--------------cccccceecccccccccccch
Confidence 348888888876432 223455666543 445677665331 122222322225567777999
Q ss_pred chH-HHhcccCcceeEE----------EecCCceeecccc----ccccchHHHHHHhhceeEEEecCCCcccCHHHHHHH
Q 043304 325 PQV-EILSHRTISAFLT----------LSHGVPIIGWPLA----GEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSAK 389 (454)
Q Consensus 325 pq~-~vL~h~~vg~fvt----------l~~GvP~l~~P~~----~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~a 389 (454)
++. ++|+... .+|| +++|+|+|.+|+- .+|..||+.+++. |+|+.+.. ..++.++|.++
T Consensus 244 ~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~---~~~~~~~L~~~ 317 (365)
T 3s2u_A 244 SDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQ---KSTGAAELAAQ 317 (365)
T ss_dssp SCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCT---TTCCHHHHHHH
T ss_pred hhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeec---CCCCHHHHHHH
Confidence 886 4787666 5666 9999999999873 5899999999999 99999986 78899999999
Q ss_pred HHHHhcCC
Q 043304 390 IELAMNET 397 (454)
Q Consensus 390 i~~vl~~~ 397 (454)
|.++|.|+
T Consensus 318 i~~ll~d~ 325 (365)
T 3s2u_A 318 LSEVLMHP 325 (365)
T ss_dssp HHHHHHCT
T ss_pred HHHHHCCH
Confidence 99999998
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.04 E-value=4.5e-08 Score=95.54 Aligned_cols=125 Identities=13% Similarity=0.144 Sum_probs=85.7
Q ss_pred CceEEEecCCccCCCHHHHHHHHHHHHhC--CCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCC-CcEEEecccc
Q 043304 249 SSVLYVSFGSQNTIAASQMMQLAMALEAS--GKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSG-QGLVVHKWAP 325 (454)
Q Consensus 249 ~~vvyvsfGS~~~~~~~~~~~~~~al~~~--~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~w~p 325 (454)
+.++++..|+... ......++++++.. +.++++.+++.. . +.+.+.+...+ .++.+.+|++
T Consensus 183 ~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~-------------~-~~l~~~~~~~~~~~v~~~g~~~ 246 (364)
T 1f0k_A 183 PVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS-------------Q-QSVEQAYAEAGQPQHKVTEFID 246 (364)
T ss_dssp SEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC-------------H-HHHHHHHHHTTCTTSEEESCCS
T ss_pred CcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch-------------H-HHHHHHHhhcCCCceEEecchh
Confidence 3467777777752 33445556666654 456667665431 1 22332222112 4677779985
Q ss_pred h-HHHhcccCcceeEE----------EecCCceeecccc---ccccchHHHHHHhhceeEEEecCCCcccCHHHHHHHHH
Q 043304 326 Q-VEILSHRTISAFLT----------LSHGVPIIGWPLA---GEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSAKIE 391 (454)
Q Consensus 326 q-~~vL~h~~vg~fvt----------l~~GvP~l~~P~~---~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~ai~ 391 (454)
+ ..+++...+ ||+ +++|+|+|+.|.. .||..|+..+.+. |.|+.++. ++.+.++++++|.
T Consensus 247 ~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~---~d~~~~~la~~i~ 320 (364)
T 1f0k_A 247 DMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQ---PQLSVDAVANTLA 320 (364)
T ss_dssp CHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCG---GGCCHHHHHHHHH
T ss_pred hHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecc---ccCCHHHHHHHHH
Confidence 4 457776663 444 9999999999987 7999999999988 99998876 5677999999999
Q ss_pred HHhcCC
Q 043304 392 LAMNET 397 (454)
Q Consensus 392 ~vl~~~ 397 (454)
++ ++
T Consensus 321 ~l--~~ 324 (364)
T 1f0k_A 321 GW--SR 324 (364)
T ss_dssp TC--CH
T ss_pred hc--CH
Confidence 88 55
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=98.47 E-value=3.1e-07 Score=83.08 Aligned_cols=122 Identities=11% Similarity=0.084 Sum_probs=80.6
Q ss_pred CceEEEecCCccCCCHHHHHHH-----HHHHHhCC-CceEEEEcCCCCCCCCchhhhccCCChhHHHhh-----------
Q 043304 249 SSVLYVSFGSQNTIAASQMMQL-----AMALEASG-KNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKI----------- 311 (454)
Q Consensus 249 ~~vvyvsfGS~~~~~~~~~~~~-----~~al~~~~-~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------- 311 (454)
+++|||+.||...+ .+.+..+ +++|.+.+ .+++|.++... ......+....
T Consensus 28 ~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~-----------~~~~~~~~~~~~~~~~~~l~p~ 95 (224)
T 2jzc_A 28 EKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY-----------SSEFEHLVQERGGQRESQKIPI 95 (224)
T ss_dssp SCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS-----------CCCCCSHHHHHTCEECSCCCSS
T ss_pred CCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc-----------hhhHHHHHHhhhcccccccccc
Confidence 45999999998432 3333433 48888777 78999987542 00111111111
Q ss_pred --------------ccCCCcEEEecccchH-HHhc-ccCcceeEE----------EecCCceeecccc----ccccchHH
Q 043304 312 --------------KGSGQGLVVHKWAPQV-EILS-HRTISAFLT----------LSHGVPIIGWPLA----GEQFYNSK 361 (454)
Q Consensus 312 --------------~~~~~~~~~~~w~pq~-~vL~-h~~vg~fvt----------l~~GvP~l~~P~~----~DQ~~na~ 361 (454)
.....++.+.+|+++. .+|+ ... ++|| +++|||+|++|.. .+|..||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~ 173 (224)
T 2jzc_A 96 DQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIAD 173 (224)
T ss_dssp CTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHH
T ss_pred ccccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHH
Confidence 0001245566787776 5787 555 5666 9999999999984 36999999
Q ss_pred HHHHhhceeEEEecCCCcccCHHHHHHHHHHH
Q 043304 362 LLEEEIGVCVEVARGLTCEVLKEDLSAKIELA 393 (454)
Q Consensus 362 ~~~~~~g~G~~l~~~~~~~~~~~~l~~ai~~v 393 (454)
++++. |+|+.+ +.++|.++|+++
T Consensus 174 ~l~~~-G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 174 KFVEL-GYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp HHHHH-SCCCEE--------CSCTTTHHHHHH
T ss_pred HHHHC-CCEEEc--------CHHHHHHHHHHH
Confidence 99999 998755 346677777776
No 24
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.82 E-value=0.0038 Score=60.65 Aligned_cols=122 Identities=11% Similarity=0.076 Sum_probs=69.1
Q ss_pred eEEEecCCccC-CCHHHHHHHHHHHHh--CCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecccchH
Q 043304 251 VLYVSFGSQNT-IAASQMMQLAMALEA--SGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKWAPQV 327 (454)
Q Consensus 251 vvyvsfGS~~~-~~~~~~~~~~~al~~--~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~pq~ 327 (454)
.+++..|+... -..+.+.+.+..+.+ .+.+++++ +... ..+.+.+.......++...+|+|+.
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~-------------~~~~l~~~~~~~~~~v~~~g~~~~~ 264 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSGR-------------YESTLRRLATDVSQNVKFLGRLEYQ 264 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCCT-------------THHHHHHHTGGGGGGEEEEESCCHH
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCch-------------HHHHHHHHHhcccCeEEEcCCCCHH
Confidence 66777788652 334444444444433 24555554 3221 1122222222113578888999877
Q ss_pred H---HhcccCccee--------------EE-----EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHH
Q 043304 328 E---ILSHRTISAF--------------LT-----LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKED 385 (454)
Q Consensus 328 ~---vL~h~~vg~f--------------vt-----l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~ 385 (454)
+ +++...+..+ -. +++|+|+|+.+..+ ....+ .. |.|+.++. -+.++
T Consensus 265 ~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i-~~-~~g~~~~~-----~d~~~ 333 (394)
T 3okp_A 265 DMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETV-TP-ATGLVVEG-----SDVDK 333 (394)
T ss_dssp HHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGC-CT-TTEEECCT-----TCHHH
T ss_pred HHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHH-hc-CCceEeCC-----CCHHH
Confidence 6 4444443221 11 88999999976532 22222 34 56776653 46899
Q ss_pred HHHHHHHHhcCC
Q 043304 386 LSAKIELAMNET 397 (454)
Q Consensus 386 l~~ai~~vl~~~ 397 (454)
+.++|.+++.++
T Consensus 334 l~~~i~~l~~~~ 345 (394)
T 3okp_A 334 LSELLIELLDDP 345 (394)
T ss_dssp HHHHHHHHHTCH
T ss_pred HHHHHHHHHhCH
Confidence 999999999877
No 25
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.76 E-value=0.00049 Score=68.11 Aligned_cols=69 Identities=16% Similarity=0.118 Sum_probs=51.4
Q ss_pred CcEEEecccchHH---HhcccCcceeEE---------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCH
Q 043304 316 QGLVVHKWAPQVE---ILSHRTISAFLT---------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLK 383 (454)
Q Consensus 316 ~~~~~~~w~pq~~---vL~h~~vg~fvt---------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 383 (454)
.++.+.+++++.+ ++++.. +++| ..+|+|+|+.|-.++++. +++. |.|+.+.. +.
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad--~vv~~SGg~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~------d~ 348 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSY--LVFTDSGGVQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT------NK 348 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEE--EEEECCHHHHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS------CH
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCccHHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC------CH
Confidence 5777778887543 566655 5666 899999999976666654 3456 87776642 78
Q ss_pred HHHHHHHHHHhcCC
Q 043304 384 EDLSAKIELAMNET 397 (454)
Q Consensus 384 ~~l~~ai~~vl~~~ 397 (454)
++|.++|.+++.++
T Consensus 349 ~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 349 ENLIKEALDLLDNK 362 (403)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHcCH
Confidence 99999999999877
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.64 E-value=0.012 Score=57.99 Aligned_cols=138 Identities=12% Similarity=0.048 Sum_probs=80.3
Q ss_pred eEEEecCCcc-C-CCHHHHHHHHHHHHh----CCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEeccc
Q 043304 251 VLYVSFGSQN-T-IAASQMMQLAMALEA----SGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKWA 324 (454)
Q Consensus 251 vvyvsfGS~~-~-~~~~~~~~~~~al~~----~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~ 324 (454)
.+++..|+.. . -..+.+.+.+..+.+ .+.+++++ +... ....+.+.+.....+..++..+|+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~-----------~~~~~~l~~~~~~~~~~~~~~g~~ 319 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGD-----------PELEGWARSLEEKHGNVKVITEML 319 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCC-----------HHHHHHHHHHHHHCTTEEEECSCC
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE-cCCC-----------hhHHHHHHHHHhhcCCEEEEcCCC
Confidence 7777888876 3 345555555555555 23444433 3221 001122222222224556667889
Q ss_pred chHH---HhcccCcceeEE------------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHHHHHH
Q 043304 325 PQVE---ILSHRTISAFLT------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSAK 389 (454)
Q Consensus 325 pq~~---vL~h~~vg~fvt------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~a 389 (454)
|+.+ +++...+..+-+ +++|+|+|+-.. ..... +.+. |.|+.++. -+.++++++
T Consensus 320 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e-~~~~-~~g~~~~~-----~d~~~la~~ 388 (439)
T 3fro_A 320 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRD-IITN-ETGILVKA-----GDPGELANA 388 (439)
T ss_dssp CHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHH-HCCT-TTCEEECT-----TCHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcce-eEEc-CceEEeCC-----CCHHHHHHH
Confidence 9876 566666433222 999999998643 33333 3334 77887764 478999999
Q ss_pred HHHHhc-CCchhHHHHHHHHHHH
Q 043304 390 IELAMN-ETEKGTDLRNKAKEVK 411 (454)
Q Consensus 390 i~~vl~-~~~~~~~~~~~a~~l~ 411 (454)
|.++++ +++..+.+.+++++..
T Consensus 389 i~~ll~~~~~~~~~~~~~~~~~~ 411 (439)
T 3fro_A 389 ILKALELSRSDLSKFRENCKKRA 411 (439)
T ss_dssp HHHHHHHTTTTTHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHH
Confidence 999998 6644445555554443
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=97.64 E-value=0.0012 Score=64.19 Aligned_cols=69 Identities=12% Similarity=0.070 Sum_probs=50.2
Q ss_pred CcEEEecccchH---HHhcccCcceeEE---------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCH
Q 043304 316 QGLVVHKWAPQV---EILSHRTISAFLT---------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLK 383 (454)
Q Consensus 316 ~~~~~~~w~pq~---~vL~h~~vg~fvt---------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 383 (454)
.++.+.+++++. .+++... +||+ +++|+|+|+.+..+++.. +.+. |.|+.+. .+.
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~------~d~ 321 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSGGLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG------TDP 321 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCHHHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC------SCH
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCcCHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC------CCH
Confidence 467776555553 5666555 4555 999999999887666655 3455 8887663 278
Q ss_pred HHHHHHHHHHhcCC
Q 043304 384 EDLSAKIELAMNET 397 (454)
Q Consensus 384 ~~l~~ai~~vl~~~ 397 (454)
++|+++|.++++++
T Consensus 322 ~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 322 EGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHhCh
Confidence 99999999999876
No 28
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.63 E-value=0.0073 Score=58.93 Aligned_cols=72 Identities=11% Similarity=0.150 Sum_probs=45.7
Q ss_pred CcEEEecccch-HHHhcccCcceeEE------------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccC
Q 043304 316 QGLVVHKWAPQ-VEILSHRTISAFLT------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVL 382 (454)
Q Consensus 316 ~~~~~~~w~pq-~~vL~h~~vg~fvt------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 382 (454)
.++...++..+ ..+++...+..+-+ +++|+|+|+.+.. .....+.+. +.|+.++. -+
T Consensus 267 ~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g~~~~~-----~d 336 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTGYLCEV-----GD 336 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTEEEECT-----TC
T ss_pred CeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-CceEEeCC-----CC
Confidence 35555555433 33666665422222 9999999987653 223333333 57777754 36
Q ss_pred HHHHHHHHHHHhcCC
Q 043304 383 KEDLSAKIELAMNET 397 (454)
Q Consensus 383 ~~~l~~ai~~vl~~~ 397 (454)
.++++++|.++++++
T Consensus 337 ~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 337 TTGVADQAIQLLKDE 351 (394)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHcCH
Confidence 899999999999877
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=97.35 E-value=0.0034 Score=61.87 Aligned_cols=69 Identities=14% Similarity=0.178 Sum_probs=47.5
Q ss_pred CcEEEecccchH---HHhcccCcceeEE---------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCH
Q 043304 316 QGLVVHKWAPQV---EILSHRTISAFLT---------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLK 383 (454)
Q Consensus 316 ~~~~~~~w~pq~---~vL~h~~vg~fvt---------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 383 (454)
.++.+.+++++. .++++.. ++|+ .++|+|+|+..-.++++ .+++. |.++.+.. +.
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad--~vv~~SGg~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~~------d~ 354 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAH--IILTDSGGIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVGT------NQ 354 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESCSGGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECTT------CH
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCccHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcCC------CH
Confidence 467776776543 3566655 4566 78999999875444443 24556 87755432 68
Q ss_pred HHHHHHHHHHhcCC
Q 043304 384 EDLSAKIELAMNET 397 (454)
Q Consensus 384 ~~l~~ai~~vl~~~ 397 (454)
++|.+++.++++++
T Consensus 355 ~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 355 QQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHcCH
Confidence 99999999999877
No 30
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=97.29 E-value=0.00072 Score=63.31 Aligned_cols=108 Identities=10% Similarity=0.063 Sum_probs=75.7
Q ss_pred CceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecccchHH
Q 043304 249 SSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKWAPQVE 328 (454)
Q Consensus 249 ~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~pq~~ 328 (454)
...|+|+||.... ......++++|.... ++.++.+... ...+.+.+.... ..|+.+..++++..
T Consensus 157 ~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~------------~~~~~l~~~~~~-~~~v~v~~~~~~m~ 220 (282)
T 3hbm_A 157 KYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN------------PNLKKLQKFAKL-HNNIRLFIDHENIA 220 (282)
T ss_dssp CEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC------------TTHHHHHHHHHT-CSSEEEEESCSCHH
T ss_pred CCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc------------hHHHHHHHHHhh-CCCEEEEeCHHHHH
Confidence 3489999997542 235566788876644 5666665442 122333333221 24788889988775
Q ss_pred -HhcccCcceeEE---------EecCCceeeccccccccchHHHHHHhhceeEEEec
Q 043304 329 -ILSHRTISAFLT---------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVAR 375 (454)
Q Consensus 329 -vL~h~~vg~fvt---------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~ 375 (454)
+++... ..|| +++|+|+|.+|...+|..||+.+++. |+++.+..
T Consensus 221 ~~m~~aD--lvI~~gG~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 221 KLMNESN--KLIISASSLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp HHHHTEE--EEEEESSHHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHHHHCC--EEEECCcHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 666554 3444 99999999999999999999999999 99998865
No 31
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.18 E-value=0.0089 Score=58.60 Aligned_cols=121 Identities=12% Similarity=0.101 Sum_probs=72.6
Q ss_pred CceEEEecCCccCCC-HHHHHHHHHHHHhC----CCceEEEEcCCCCCCCCchhhhccCCChhHHHh---hccCCCcEEE
Q 043304 249 SSVLYVSFGSQNTIA-ASQMMQLAMALEAS----GKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEK---IKGSGQGLVV 320 (454)
Q Consensus 249 ~~vvyvsfGS~~~~~-~~~~~~~~~al~~~----~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~ 320 (454)
+..++++.|...... .+.+..+++|+.+. +..||+...+. +-+.+.+. .. ...++.+
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--------------~~~~l~~~~~~~~-~~~~v~l 267 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--------------TKKRLEDLEGFKE-LGDKIRF 267 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------------HHHHHHTSGGGGG-TGGGEEE
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------------HHHHHHHHHHHhc-CCCCEEE
Confidence 348888877764433 35567777777653 56777765321 00001100 10 0236666
Q ss_pred ecccchH---HHhcccCcceeEE---------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHHHHH
Q 043304 321 HKWAPQV---EILSHRTISAFLT---------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSA 388 (454)
Q Consensus 321 ~~w~pq~---~vL~h~~vg~fvt---------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~ 388 (454)
.+.++.. .++++.. +++| ..+|+|+|.++-..+-+. .++. |.++.+.. +.++|.+
T Consensus 268 ~~~lg~~~~~~l~~~ad--lvvt~SGgv~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~~------d~~~i~~ 334 (385)
T 4hwg_A 268 LPAFSFTDYVKLQMNAF--CILSDSGTITEEASILNLPALNIREAHERPE----GMDA-GTLIMSGF------KAERVLQ 334 (385)
T ss_dssp CCCCCHHHHHHHHHHCS--EEEECCTTHHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECCS------SHHHHHH
T ss_pred EcCCCHHHHHHHHHhCc--EEEECCccHHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcCC------CHHHHHH
Confidence 5655543 4676766 5666 889999999986543222 2456 87766532 7899999
Q ss_pred HHHHHhcCC
Q 043304 389 KIELAMNET 397 (454)
Q Consensus 389 ai~~vl~~~ 397 (454)
++.++++++
T Consensus 335 ai~~ll~d~ 343 (385)
T 4hwg_A 335 AVKTITEEH 343 (385)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhCh
Confidence 999999887
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.08 E-value=0.059 Score=52.32 Aligned_cols=122 Identities=9% Similarity=0.030 Sum_probs=72.3
Q ss_pred eEEEecCCc-cC-CCHHHHHHHHHHHHhC--CCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecccch
Q 043304 251 VLYVSFGSQ-NT-IAASQMMQLAMALEAS--GKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKWAPQ 326 (454)
Q Consensus 251 vvyvsfGS~-~~-~~~~~~~~~~~al~~~--~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~pq 326 (454)
.+++..|+. .. -..+.+.+.+..+.+. +.++++ ++... . +.+.+.+.....++.+.+|+|+
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~~~-------------~-~~l~~~~~~~~~~v~~~g~~~~ 273 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILI-VGRGD-------------E-DELREQAGDLAGHLRFLGQVDD 273 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEE-ESCSC-------------H-HHHHHHTGGGGGGEEECCSCCH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEE-EcCCc-------------H-HHHHHHHHhccCcEEEEecCCH
Confidence 566677877 42 3344444444444332 344443 33221 1 3333333322357888899998
Q ss_pred H---HHhcccCcceeEE-------------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHHHHHHH
Q 043304 327 V---EILSHRTISAFLT-------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSAKI 390 (454)
Q Consensus 327 ~---~vL~h~~vg~fvt-------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~ai 390 (454)
. .+++...+..+-+ +++|+|+|+.+. ......+.+. +.|+.++. -+.+++.++|
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-----~d~~~l~~~i 343 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV-----DDADGMAAAL 343 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-----TCHHHHHHHH
T ss_pred HHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-----CCHHHHHHHH
Confidence 6 4666555432221 999999998765 3444555544 67777753 4789999999
Q ss_pred HHHhcCC
Q 043304 391 ELAMNET 397 (454)
Q Consensus 391 ~~vl~~~ 397 (454)
.++++++
T Consensus 344 ~~l~~~~ 350 (406)
T 2gek_A 344 IGILEDD 350 (406)
T ss_dssp HHHHHCH
T ss_pred HHHHcCH
Confidence 9999877
No 33
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.78 E-value=0.0051 Score=52.94 Aligned_cols=122 Identities=7% Similarity=-0.021 Sum_probs=74.4
Q ss_pred eEEEecCCccCCCHHHHHHHHHHHHhC-CCceEEEEcCCCCCCCCchhhhccCCChhHHH--hhccCCCcEEEecccchH
Q 043304 251 VLYVSFGSQNTIAASQMMQLAMALEAS-GKNFIWVVRPPIGFDINSEFKAKEWLPQGFEE--KIKGSGQGLVVHKWAPQV 327 (454)
Q Consensus 251 vvyvsfGS~~~~~~~~~~~~~~al~~~-~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~w~pq~ 327 (454)
.+++.+|+.. +...+..+++++... +.+++++-.... . ..+ ..+.+ +. ....++.+.+|+|+.
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~--------~--~~l-~~~~~~~~~-~l~~~v~~~g~~~~~ 89 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSK--------G--DHA-ERYARKIMK-IAPDNVKFLGSVSEE 89 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCT--------T--STH-HHHHHHHHH-HSCTTEEEEESCCHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCcc--------H--HHH-HHHHHhhhc-ccCCcEEEeCCCCHH
Confidence 4455667765 233456677777775 566666533221 0 011 11111 11 124588888999983
Q ss_pred ---HHhcccCcceeEE------------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHHHHHHHHH
Q 043304 328 ---EILSHRTISAFLT------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSAKIEL 392 (454)
Q Consensus 328 ---~vL~h~~vg~fvt------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~ai~~ 392 (454)
.+++...+..+.+ +++|+|+|+... ..+...+.+. +.|+.+ . -+.++++++|.+
T Consensus 90 e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~ 158 (177)
T 2f9f_A 90 ELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKK 158 (177)
T ss_dssp HHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHH
Confidence 4677766543322 999999998753 3444445444 577776 4 368999999999
Q ss_pred HhcCC
Q 043304 393 AMNET 397 (454)
Q Consensus 393 vl~~~ 397 (454)
+++++
T Consensus 159 l~~~~ 163 (177)
T 2f9f_A 159 VSKNP 163 (177)
T ss_dssp HHHCT
T ss_pred HHhCH
Confidence 99887
No 34
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=95.81 E-value=0.043 Score=53.02 Aligned_cols=122 Identities=11% Similarity=0.141 Sum_probs=72.1
Q ss_pred CceEEEecCCccCCCHHHHHHHHHHHHh-----CCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecc
Q 043304 249 SSVLYVSFGSQNTIAASQMMQLAMALEA-----SGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKW 323 (454)
Q Consensus 249 ~~vvyvsfGS~~~~~~~~~~~~~~al~~-----~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w 323 (454)
+.+++++.|......+ .+..+++|+.. .+..+++..++. ..+-+.+.+.+.. ..++.+.+|
T Consensus 205 ~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~------------~~~~~~l~~~~~~-~~~v~~~g~ 270 (384)
T 1vgv_A 205 KKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN------------PNVREPVNRILGH-VKNVILIDP 270 (384)
T ss_dssp SEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC------------HHHHHHHHHHHTT-CTTEEEECC
T ss_pred CCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC------------HHHHHHHHHHhhc-CCCEEEeCC
Confidence 3477888887654323 34455555543 244555543311 0011122222221 247777666
Q ss_pred cchH---HHhcccCcceeEE---------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHHHHHHHH
Q 043304 324 APQV---EILSHRTISAFLT---------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSAKIE 391 (454)
Q Consensus 324 ~pq~---~vL~h~~vg~fvt---------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~ai~ 391 (454)
+++. .+++...+ ||+ +++|+|+|+.+..++. ..+.+. |.|+.++. +.++|+++|.
T Consensus 271 ~~~~~~~~~~~~ad~--~v~~Sg~~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~~------d~~~la~~i~ 337 (384)
T 1vgv_A 271 QEYLPFVWLMNHAWL--ILTDSGGIQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVGT------DKQRIVEEVT 337 (384)
T ss_dssp CCHHHHHHHHHHCSE--EEESSSTGGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEECS------SHHHHHHHHH
T ss_pred CCHHHHHHHHHhCcE--EEECCcchHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeCC------CHHHHHHHHH
Confidence 6653 35665553 444 9999999999875443 334566 88887742 7899999999
Q ss_pred HHhcCC
Q 043304 392 LAMNET 397 (454)
Q Consensus 392 ~vl~~~ 397 (454)
++++++
T Consensus 338 ~ll~d~ 343 (384)
T 1vgv_A 338 RLLKDE 343 (384)
T ss_dssp HHHHCH
T ss_pred HHHhCh
Confidence 999877
No 35
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=95.78 E-value=0.071 Score=46.21 Aligned_cols=83 Identities=11% Similarity=0.053 Sum_probs=54.9
Q ss_pred cEEE-ecccchHH---HhcccCcceeEE------------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcc
Q 043304 317 GLVV-HKWAPQVE---ILSHRTISAFLT------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCE 380 (454)
Q Consensus 317 ~~~~-~~w~pq~~---vL~h~~vg~fvt------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 380 (454)
++.+ .+|+++.+ +++...+..+-+ +++|+|+|+... ......+ +. +.|+.+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~----- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA----- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-----
T ss_pred CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-----
Confidence 7888 89998554 666666433222 999999998754 3344444 44 67777754
Q ss_pred cCHHHHHHHHHHHhc-CCchhHHHHHHHHHH
Q 043304 381 VLKEDLSAKIELAMN-ETEKGTDLRNKAKEV 410 (454)
Q Consensus 381 ~~~~~l~~ai~~vl~-~~~~~~~~~~~a~~l 410 (454)
-+.+++.++|.++++ +++..+.+.+++++.
T Consensus 165 ~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~ 195 (200)
T 2bfw_A 165 GDPGELANAILKALELSRSDLSKFRENCKKR 195 (200)
T ss_dssp TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 378999999999998 773333444444443
No 36
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=95.72 E-value=0.058 Score=45.26 Aligned_cols=135 Identities=16% Similarity=0.137 Sum_probs=72.4
Q ss_pred eEEEecCCccCCCHHHHHHHHHHHHhCC--CceEEE-EcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecccchH
Q 043304 251 VLYVSFGSQNTIAASQMMQLAMALEASG--KNFIWV-VRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKWAPQV 327 (454)
Q Consensus 251 vvyvsfGS~~~~~~~~~~~~~~al~~~~--~~~lw~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~pq~ 327 (454)
++++..|+... ...+..+++++.... ..+-+. ++... ..+.+.+.+...+.++.+ +|+|+.
T Consensus 3 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-------------~~~~~~~~~~~~~~~v~~-g~~~~~ 66 (166)
T 3qhp_A 3 FKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP-------------DEKKIKLLAQKLGVKAEF-GFVNSN 66 (166)
T ss_dssp EEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST-------------THHHHHHHHHHHTCEEEC-CCCCHH
T ss_pred eEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc-------------cHHHHHHHHHHcCCeEEE-eecCHH
Confidence 66777787753 233555666666542 133333 33211 112222222211347777 999876
Q ss_pred H---HhcccCcceeEE------------EecCC-ceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHHHHHHHH
Q 043304 328 E---ILSHRTISAFLT------------LSHGV-PIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSAKIE 391 (454)
Q Consensus 328 ~---vL~h~~vg~fvt------------l~~Gv-P~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~ai~ 391 (454)
+ +++...+..+-+ +++|+ |+|+-...+ .....+.+. +. .+. .-+.+++.++|.
T Consensus 67 ~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~-----~~~~~~l~~~i~ 135 (166)
T 3qhp_A 67 ELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFE-----PNNAKDLSAKID 135 (166)
T ss_dssp HHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EEC-----TTCHHHHHHHHH
T ss_pred HHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEc-----CCCHHHHHHHHH
Confidence 5 566666433322 99995 999933211 111122222 22 232 247899999999
Q ss_pred HHhcCCchhHHHHHHHHHHHH
Q 043304 392 LAMNETEKGTDLRNKAKEVKV 412 (454)
Q Consensus 392 ~vl~~~~~~~~~~~~a~~l~~ 412 (454)
+++.+++..+.+.+++++..+
T Consensus 136 ~l~~~~~~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 136 WWLENKLERERMQNEYAKSAL 156 (166)
T ss_dssp HHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHHHHH
Confidence 999877444455666655443
No 37
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=95.35 E-value=0.098 Score=51.48 Aligned_cols=89 Identities=13% Similarity=0.090 Sum_probs=58.8
Q ss_pred CCcEEEecccchHH---HhcccCcceeEE------------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCc
Q 043304 315 GQGLVVHKWAPQVE---ILSHRTISAFLT------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTC 379 (454)
Q Consensus 315 ~~~~~~~~w~pq~~---vL~h~~vg~fvt------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 379 (454)
..++...+|+|+.+ +++...+..+-+ +++|+|+|+.+. ......+.+. +.|+.++.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~---- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG---- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS----
T ss_pred CCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC----
Confidence 45788889998754 666666422222 999999998753 3344445444 57887754
Q ss_pred ccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 043304 380 EVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVI 413 (454)
Q Consensus 380 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~ 413 (454)
-+.++++++|.+++++++..+.+.+++++..+.
T Consensus 376 -~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 376 -HSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp -CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 478999999999998773333455555554443
No 38
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=94.69 E-value=0.15 Score=48.82 Aligned_cols=88 Identities=10% Similarity=0.176 Sum_probs=57.8
Q ss_pred CcEEEecccchH-HHhcccCcceeEE------------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccC
Q 043304 316 QGLVVHKWAPQV-EILSHRTISAFLT------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVL 382 (454)
Q Consensus 316 ~~~~~~~w~pq~-~vL~h~~vg~fvt------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 382 (454)
.++...++..+. .+++...+..+-+ +++|+|+|+.+. ..+...+.+. +.|+.+.. .-+
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----~~~ 323 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE----PFS 323 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS----SCC
T ss_pred CcEEECCCcccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC----CCC
Confidence 467777775443 3666666422212 999999999754 3456667766 88988851 247
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 043304 383 KEDLSAKIELAMNETEKGTDLRNKAKEVKV 412 (454)
Q Consensus 383 ~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~ 412 (454)
.++++++|.+++++++..+.+.+++++..+
T Consensus 324 ~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 324 QEQLNEVLRKALTQSPLRMAWAENARHYAD 353 (374)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 899999999999877333344455444433
No 39
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=94.55 E-value=0.45 Score=50.49 Aligned_cols=95 Identities=20% Similarity=0.326 Sum_probs=65.2
Q ss_pred CCceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecccchH
Q 043304 248 YSSVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKWAPQV 327 (454)
Q Consensus 248 ~~~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~pq~ 327 (454)
.+.++|.||-+...++++.+...++-|++.+..+||..+.+. ... ..+-..+. +..-.+..+++.+..|..
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~----~~~----~~l~~~~~-~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA----VGE----PNIQQYAQ-NMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG----GGH----HHHHHHHH-HTTCCGGGEEEEECCCHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH----HHH----HHHHHHHH-hcCCCcCeEEECCCCCHH
Confidence 356999999999999999999999999999999999987552 000 11111111 111114567787888987
Q ss_pred HHhc-ccCcceeEE-------------EecCCceeecc
Q 043304 328 EILS-HRTISAFLT-------------LSHGVPIIGWP 351 (454)
Q Consensus 328 ~vL~-h~~vg~fvt-------------l~~GvP~l~~P 351 (454)
+-|+ |..+..|+= |++|||+|.+|
T Consensus 592 ~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 592 EHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp HHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred HHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 7553 333333332 99999999998
No 40
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=94.26 E-value=0.11 Score=49.89 Aligned_cols=69 Identities=14% Similarity=0.103 Sum_probs=49.1
Q ss_pred CcEEEecccchHH---HhcccCcceeEE---------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCH
Q 043304 316 QGLVVHKWAPQVE---ILSHRTISAFLT---------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLK 383 (454)
Q Consensus 316 ~~~~~~~w~pq~~---vL~h~~vg~fvt---------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~ 383 (454)
.++.+.+++++.+ +|++.. .|++ +++|+|+|+....+.. ..+.+. |.|+.+.. +.
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~~------d~ 329 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSGGVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAGT------DE 329 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCHHHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECCS------CH
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCCChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcCC------CH
Confidence 5777767777654 566655 4555 9999999998543332 334556 78877642 78
Q ss_pred HHHHHHHHHHhcCC
Q 043304 384 EDLSAKIELAMNET 397 (454)
Q Consensus 384 ~~l~~ai~~vl~~~ 397 (454)
++++++|.++++++
T Consensus 330 ~~la~~i~~ll~~~ 343 (375)
T 3beo_A 330 ETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHhCh
Confidence 99999999999876
No 41
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=93.30 E-value=0.097 Score=50.18 Aligned_cols=100 Identities=16% Similarity=0.202 Sum_probs=69.8
Q ss_pred cEEEecccchHHHh---cccCcceeEE-------------------EecCCceeeccccccccchHHHHHHhhceeEEEe
Q 043304 317 GLVVHKWAPQVEIL---SHRTISAFLT-------------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVA 374 (454)
Q Consensus 317 ~~~~~~w~pq~~vL---~h~~vg~fvt-------------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 374 (454)
|+...+|+|+.++. +..+.+.... +++|+|+|+.+ ...++..+.+. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 88888999998854 3333433321 89999999865 45677788888 9999884
Q ss_pred cCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhccCCCCCChHHHHHHHHHH
Q 043304 375 RGLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIKNAVRNEDNFKGPSVKAMDQFLNA 438 (454)
Q Consensus 375 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~a~~~~~~~~g~s~~~~~~~~~~ 438 (454)
+.+++.+++.++.. + +.+++++||++.++.++ .|--..+.+.+.+.+
T Consensus 290 -------~~~e~~~~i~~l~~-~-~~~~m~~na~~~a~~~~--------~~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNE-D-EYIELVKNVRSFNPILR--------KGFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCCH-H-HHHHHHHHHHHHTHHHH--------TTHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCH-H-HHHHHHHHHHHHHHHhh--------ccHHHHHHHHHHHHH
Confidence 35788888887643 3 45689999999988886 344444455444443
No 42
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=93.23 E-value=0.35 Score=48.55 Aligned_cols=73 Identities=15% Similarity=0.101 Sum_probs=50.7
Q ss_pred CCcEEEecccchHH---Hhccc----CcceeEE------------EecCCceeeccccccccchHHHHHHhhceeEEEec
Q 043304 315 GQGLVVHKWAPQVE---ILSHR----TISAFLT------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVAR 375 (454)
Q Consensus 315 ~~~~~~~~w~pq~~---vL~h~----~vg~fvt------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~ 375 (454)
..++...+|+|+.+ +++.. .+-.+-+ +++|+|+|+... ......+.+. +.|+.++.
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~ 408 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP 408 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC
Confidence 35688889998765 55566 5422222 999999998753 3344444443 57888754
Q ss_pred CCCcccCHHHHHHHHHHHhcCC
Q 043304 376 GLTCEVLKEDLSAKIELAMNET 397 (454)
Q Consensus 376 ~~~~~~~~~~l~~ai~~vl~~~ 397 (454)
-+.++++++|.++++++
T Consensus 409 -----~d~~~la~~i~~ll~~~ 425 (499)
T 2r60_A 409 -----EDPEDIARGLLKAFESE 425 (499)
T ss_dssp -----TCHHHHHHHHHHHHSCH
T ss_pred -----CCHHHHHHHHHHHHhCH
Confidence 47899999999999877
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=92.50 E-value=2.5 Score=40.81 Aligned_cols=69 Identities=9% Similarity=0.077 Sum_probs=43.7
Q ss_pred EEEecccchHH---HhcccCcceeEE------------EecCCceeeccccccccchHHHHHHhhce-------------
Q 043304 318 LVVHKWAPQVE---ILSHRTISAFLT------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGV------------- 369 (454)
Q Consensus 318 ~~~~~w~pq~~---vL~h~~vg~fvt------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~------------- 369 (454)
+...+|+|+.+ +++...+-.+-+ +++|+|+|+.... .....+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~-~~~~i~~~~~~~~~~ 330 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGD-CVYKIKPSAWISVDD 330 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTT-TSEEECCCEEEECTT
T ss_pred eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccC-ccccccccccccccc
Confidence 66778998665 455555422222 9999999986532 222333221 11
Q ss_pred --eE--EEecCCCcccCHHHHHHHHHHHhcCC
Q 043304 370 --CV--EVARGLTCEVLKEDLSAKIELAMNET 397 (454)
Q Consensus 370 --G~--~l~~~~~~~~~~~~l~~ai~~vl~~~ 397 (454)
|+ .+.. -+.++++++| +++.++
T Consensus 331 ~~G~~gl~~~-----~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 331 RDGIGGIEGI-----IDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp TCSSCCEEEE-----CCHHHHHHHH-HHTTSH
T ss_pred ccCcceeeCC-----CCHHHHHHHH-HHhcCH
Confidence 55 4543 3889999999 999877
No 44
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=92.17 E-value=0.62 Score=47.99 Aligned_cols=128 Identities=9% Similarity=0.010 Sum_probs=74.5
Q ss_pred ceEEEecCCccCCCHHHHHHHHHHHHhCCCceEEEE--cCCCCCCCCchhhhccCCChhHHH-hhccCCCcEEEecccch
Q 043304 250 SVLYVSFGSQNTIAASQMMQLAMALEASGKNFIWVV--RPPIGFDINSEFKAKEWLPQGFEE-KIKGSGQGLVVHKWAPQ 326 (454)
Q Consensus 250 ~vvyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~--~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~w~pq 326 (454)
.++|.||++.....++.+...++-+++.+..++|.. +... +.. ..+-..+.+ .+ ...+++.+.+|+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~-----g~~---~~~~~~~~~~GI---~~Rv~F~g~~p~ 509 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN-----GIT---HPYVERFIKSYL---GDSATAHPHSPY 509 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC-----GGG---HHHHHHHHHHHH---GGGEEEECCCCH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc-----hhh---HHHHHHHHHcCC---CccEEEcCCCCH
Confidence 589999999888999999999999999887888753 3211 000 001111111 12 235667788888
Q ss_pred HHHh---cccCc--------ceeEE---EecCCceeeccccccccc---hHHHHHHhhceeEE-EecCCCcccCHHHHHH
Q 043304 327 VEIL---SHRTI--------SAFLT---LSHGVPIIGWPLAGEQFY---NSKLLEEEIGVCVE-VARGLTCEVLKEDLSA 388 (454)
Q Consensus 327 ~~vL---~h~~v--------g~fvt---l~~GvP~l~~P~~~DQ~~---na~~~~~~~g~G~~-l~~~~~~~~~~~~l~~ 388 (454)
.+.| +...+ |+..+ +++|||+|+++- +++. -+..+... |+.-. +. -+.++..+
T Consensus 510 ~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G--~~~asRvgaSlL~~~-GLpE~LIA------~d~eeYv~ 580 (631)
T 3q3e_A 510 HQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTG--AEVHEHIDEGLFKRL-GLPEWLIA------NTVDEYVE 580 (631)
T ss_dssp HHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECC--SSHHHHHHHHHHHHT-TCCGGGEE------SSHHHHHH
T ss_pred HHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccC--CcHHHHhHHHHHHhc-CCCcceec------CCHHHHHH
Confidence 7755 22222 22212 999999999873 2221 11122222 44321 22 25677766
Q ss_pred HHHHHhcCC
Q 043304 389 KIELAMNET 397 (454)
Q Consensus 389 ai~~vl~~~ 397 (454)
..-++.+|.
T Consensus 581 ~Av~La~D~ 589 (631)
T 3q3e_A 581 RAVRLAENH 589 (631)
T ss_dssp HHHHHHHCH
T ss_pred HHHHHhCCH
Confidence 666788777
No 45
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=88.71 E-value=2.8 Score=42.48 Aligned_cols=73 Identities=21% Similarity=0.170 Sum_probs=45.4
Q ss_pred CcEEEecccchHH---HhcccCcceeEE-------------EecCCceeecccccccc-chHHHHHHhhceeEEEecCCC
Q 043304 316 QGLVVHKWAPQVE---ILSHRTISAFLT-------------LSHGVPIIGWPLAGEQF-YNSKLLEEEIGVCVEVARGLT 378 (454)
Q Consensus 316 ~~~~~~~w~pq~~---vL~h~~vg~fvt-------------l~~GvP~l~~P~~~DQ~-~na~~~~~~~g~G~~l~~~~~ 378 (454)
.++++.+|+|+.+ +++...+ |+. +++|+|+|++|-..=.- .-+..+... |+.-.+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC---
Confidence 5788889998654 4555443 331 99999999976421001 112233333 44333321
Q ss_pred cccCHHHHHHHHHHHhcCC
Q 043304 379 CEVLKEDLSAKIELAMNET 397 (454)
Q Consensus 379 ~~~~~~~l~~ai~~vl~~~ 397 (454)
+.+++.+++.++++++
T Consensus 508 ---~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 508 ---DDAAFVAKAVALASDP 523 (568)
T ss_dssp ---SHHHHHHHHHHHHHCH
T ss_pred ---CHHHHHHHHHHHhcCH
Confidence 7899999999999887
No 46
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=87.41 E-value=6.1 Score=38.05 Aligned_cols=69 Identities=10% Similarity=0.029 Sum_probs=46.9
Q ss_pred CCcEEEecccc---hH---HHhcccCcceeEE--------------EecCCceeeccccccccchHHHHHHhhceeEEEe
Q 043304 315 GQGLVVHKWAP---QV---EILSHRTISAFLT--------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVA 374 (454)
Q Consensus 315 ~~~~~~~~w~p---q~---~vL~h~~vg~fvt--------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 374 (454)
..++.+.+|++ +. .+++...+ |+. +++|+|+|+.+. ..+...+.+. +.|+.++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 35788878765 33 25655554 333 999999998764 2344444444 5677662
Q ss_pred cCCCcccCHHHHHHHHHHHhcCC
Q 043304 375 RGLTCEVLKEDLSAKIELAMNET 397 (454)
Q Consensus 375 ~~~~~~~~~~~l~~ai~~vl~~~ 397 (454)
+.++++++|.++++++
T Consensus 365 -------d~~~la~~i~~ll~~~ 380 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHP 380 (416)
T ss_dssp -------SHHHHHHHHHHHHHCH
T ss_pred -------CHHHHHHHHHHHHhCH
Confidence 6789999999999877
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=85.83 E-value=0.85 Score=44.03 Aligned_cols=66 Identities=24% Similarity=0.322 Sum_probs=48.5
Q ss_pred EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 043304 341 LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSAKIELAMNETEKGTDLRNKAKEVKVIIK 415 (454)
Q Consensus 341 l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 415 (454)
+++|+|+|+-|..++.......+.+. |.++... +.++|+++|.+++++ +..+.+.+++++..+.-.
T Consensus 299 mA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~-------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 299 TCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK-------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC-------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC-------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 99999999877766666655555455 7766652 568999999999987 555578888877665544
No 48
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=84.94 E-value=2.4 Score=42.05 Aligned_cols=122 Identities=11% Similarity=0.054 Sum_probs=66.3
Q ss_pred eEEEecCCccC-CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEE-EecccchH-
Q 043304 251 VLYVSFGSQNT-IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLV-VHKWAPQV- 327 (454)
Q Consensus 251 vvyvsfGS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~w~pq~- 327 (454)
.+++..|.... -..+.+.+.+..+.+.+.+++++-.++ ..+-+.+.+.....+.+++ ..++ +..
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~ 359 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD------------PVLQEGFLAAAAEYPGQVGVQIGY-HEAF 359 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC------------HHHHHHHHHHHHHSTTTEEEEESC-CHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc------------hHHHHHHHHHHHhCCCcEEEeCCC-CHHH
Confidence 56666777652 334444444444443466666553221 0011222222222245664 5577 433
Q ss_pred --HHhcccCcceeEE--------------EecCCceeeccccccccchHHHHHHhh---------ceeEEEecCCCcccC
Q 043304 328 --EILSHRTISAFLT--------------LSHGVPIIGWPLAGEQFYNSKLLEEEI---------GVCVEVARGLTCEVL 382 (454)
Q Consensus 328 --~vL~h~~vg~fvt--------------l~~GvP~l~~P~~~DQ~~na~~~~~~~---------g~G~~l~~~~~~~~~ 382 (454)
.+++...+ |+. +++|+|+|+.... .....+ ..- +.|+.++. -+
T Consensus 360 ~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v-~~~~~~~~~~~~~~G~l~~~-----~d 427 (485)
T 2qzs_A 360 SHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTV-SDCSLENLADGVASGFVFED-----SN 427 (485)
T ss_dssp HHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHC-CBCCHHHHHTTCCCBEEECS-----SS
T ss_pred HHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----Ccccee-ccCccccccccccceEEECC-----CC
Confidence 46666664 443 9999999987542 222222 220 36777654 47
Q ss_pred HHHHHHHHHHHh---cCC
Q 043304 383 KEDLSAKIELAM---NET 397 (454)
Q Consensus 383 ~~~l~~ai~~vl---~~~ 397 (454)
.++++++|.+++ .++
T Consensus 428 ~~~la~~i~~ll~~~~~~ 445 (485)
T 2qzs_A 428 AWSLLRAIRRAFVLWSRP 445 (485)
T ss_dssp HHHHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHcCCH
Confidence 899999999999 555
No 49
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=83.87 E-value=1.8 Score=40.58 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=67.5
Q ss_pred EEEecCCccCCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecccchH---H
Q 043304 252 LYVSFGSQNTIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKWAPQV---E 328 (454)
Q Consensus 252 vyvsfGS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~pq~---~ 328 (454)
+++..|+.. +...+..++++++..+.+++++ +... ..+.+.+..+..+.++...+|+|+. .
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~-------------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~ 227 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW-------------EPEYFDEITRRYGSTVEPIGEVGGERRLD 227 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC-------------CHHHHHHHHHHHTTTEEECCCCCHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc-------------cHHHHHHHHHHhCCCEEEeccCCHHHHHH
Confidence 344567765 3334556667776667776655 3221 1111221111113688888999987 3
Q ss_pred HhcccCcc-----------------eeEE-----EecCCceeeccccccccchHHHHHH--hhceeEEEecCCCcccCHH
Q 043304 329 ILSHRTIS-----------------AFLT-----LSHGVPIIGWPLAGEQFYNSKLLEE--EIGVCVEVARGLTCEVLKE 384 (454)
Q Consensus 329 vL~h~~vg-----------------~fvt-----l~~GvP~l~~P~~~DQ~~na~~~~~--~~g~G~~l~~~~~~~~~~~ 384 (454)
+++...+- +|-. +++|+|+|+... ..+...+.+ - +.|+.+ .. +.+
T Consensus 228 ~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~-----~~-d~~ 296 (342)
T 2iuy_A 228 LLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGT-----DF-APD 296 (342)
T ss_dssp HHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSS-----CC-CHH
T ss_pred HHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEc-----CC-CHH
Confidence 44433321 1111 999999998765 335555554 3 455544 24 889
Q ss_pred HHHHHHHHHhc
Q 043304 385 DLSAKIELAMN 395 (454)
Q Consensus 385 ~l~~ai~~vl~ 395 (454)
+++++|.++++
T Consensus 297 ~l~~~i~~l~~ 307 (342)
T 2iuy_A 297 EARRTLAGLPA 307 (342)
T ss_dssp HHHHHHHTSCC
T ss_pred HHHHHHHHHHH
Confidence 99999999886
No 50
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=83.33 E-value=9.4 Score=37.60 Aligned_cols=122 Identities=8% Similarity=0.009 Sum_probs=67.2
Q ss_pred eEEEecCCccC-CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEE-EecccchH-
Q 043304 251 VLYVSFGSQNT-IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLV-VHKWAPQV- 327 (454)
Q Consensus 251 vvyvsfGS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~w~pq~- 327 (454)
.+++..|.... -..+.+.+.+..+.+.+.+++++-.++ ..+-+.+.+.....+.+++ ..++ +..
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~ 358 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD------------VALEGALLAAASRHHGRVGVAIGY-NEPL 358 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC------------HHHHHHHHHHHHHTTTTEEEEESC-CHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc------------hHHHHHHHHHHHhCCCcEEEecCC-CHHH
Confidence 46677788763 334444444444444466666553221 0011222222222245665 5577 443
Q ss_pred --HHhcccCcceeEE--------------EecCCceeeccccccccchHHHHHHhh---------ceeEEEecCCCcccC
Q 043304 328 --EILSHRTISAFLT--------------LSHGVPIIGWPLAGEQFYNSKLLEEEI---------GVCVEVARGLTCEVL 382 (454)
Q Consensus 328 --~vL~h~~vg~fvt--------------l~~GvP~l~~P~~~DQ~~na~~~~~~~---------g~G~~l~~~~~~~~~ 382 (454)
.+++...+ |+. +++|+|+|+.... .....+ ..- +.|+.++. -+
T Consensus 359 ~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v-~~~~~~~~~~~~~~G~l~~~-----~d 426 (485)
T 1rzu_A 359 SHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTV-IDANHAALASKAATGVQFSP-----VT 426 (485)
T ss_dssp HHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHC-CBCCHHHHHTTCCCBEEESS-----CS
T ss_pred HHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhhee-cccccccccccCCcceEeCC-----CC
Confidence 35666664 443 9999999987542 222222 221 36776653 46
Q ss_pred HHHHHHHHHHHh---cCC
Q 043304 383 KEDLSAKIELAM---NET 397 (454)
Q Consensus 383 ~~~l~~ai~~vl---~~~ 397 (454)
.++++++|.+++ .++
T Consensus 427 ~~~la~~i~~ll~~~~~~ 444 (485)
T 1rzu_A 427 LDGLKQAIRRTVRYYHDP 444 (485)
T ss_dssp HHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHhCCH
Confidence 899999999999 555
No 51
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=70.59 E-value=22 Score=38.04 Aligned_cols=57 Identities=4% Similarity=0.073 Sum_probs=37.2
Q ss_pred EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcccCHHHHHHHHHHHh----cCCchhHHHHHHH
Q 043304 341 LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCEVLKEDLSAKIELAM----NETEKGTDLRNKA 407 (454)
Q Consensus 341 l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~ai~~vl----~~~~~~~~~~~~a 407 (454)
+++|+|+|+- |.......+.+. +.|+.++. -+.++++++|.+++ .+++..+.+.+++
T Consensus 685 MA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~a 745 (816)
T 3s28_A 685 MTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-----YHGDQAADTLADFFTKCKEDPSHWDEISKGG 745 (816)
T ss_dssp HHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-----TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHH
T ss_pred HHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999985 444444545444 67888764 46788999997766 6773333333333
No 52
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=66.39 E-value=5.5 Score=38.66 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=48.2
Q ss_pred CCcEEEecccchHH---HhcccCcceeEE------------E-------ecCCceeeccccccccchHHHHHHhhceeEE
Q 043304 315 GQGLVVHKWAPQVE---ILSHRTISAFLT------------L-------SHGVPIIGWPLAGEQFYNSKLLEEEIGVCVE 372 (454)
Q Consensus 315 ~~~~~~~~w~pq~~---vL~h~~vg~fvt------------l-------~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~ 372 (454)
..++...+|+|+.+ +++...+..+-+ + ++|+|+|+-.. +.+. ..|+.
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l 332 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRF 332 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEE
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEE
Confidence 45788889998765 566666433322 7 99999999755 3333 55776
Q ss_pred -EecCCCcccCHHHHHHHHHHHhcCC
Q 043304 373 -VARGLTCEVLKEDLSAKIELAMNET 397 (454)
Q Consensus 373 -l~~~~~~~~~~~~l~~ai~~vl~~~ 397 (454)
+.. -+.++++++|.++++++
T Consensus 333 ~v~~-----~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 333 GYTP-----GNADSVIAAITQALEAP 353 (406)
T ss_dssp EECT-----TCHHHHHHHHHHHHHCC
T ss_pred EeCC-----CCHHHHHHHHHHHHhCc
Confidence 654 37899999999999887
No 53
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=63.76 E-value=43 Score=33.68 Aligned_cols=126 Identities=10% Similarity=-0.028 Sum_probs=63.5
Q ss_pred eEEEecCCccC-CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecccchHH-
Q 043304 251 VLYVSFGSQNT-IAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKWAPQVE- 328 (454)
Q Consensus 251 vvyvsfGS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~pq~~- 328 (454)
.+++..|.... -..+.+.+.+.-+.+.+.++++...++ .. ....+.......+.++.+..+.++..
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~--------~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~ 395 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK--------KK----FEKLLKSMEEKYPGKVRAVVKFNAPLA 395 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC--------HH----HHHHHHHHHHHSTTTEEEECSCCHHHH
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC--------ch----HHHHHHHHHhhcCCceEEEEeccHHHH
Confidence 55666677652 233333333333434466666554322 10 11111111111245666666666543
Q ss_pred --HhcccCcceeEE--------------EecCCceeeccccccccchHHHHHHhhceeEEEecCC-C----cccCHHHHH
Q 043304 329 --ILSHRTISAFLT--------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGL-T----CEVLKEDLS 387 (454)
Q Consensus 329 --vL~h~~vg~fvt--------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~-~----~~~~~~~l~ 387 (454)
+++... .|+. +.+|+|+|+-... .....|.+- ..|....... + ..-+.+.|.
T Consensus 396 ~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 396 HLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHH
Confidence 555555 3444 9999999986542 333333333 4555443210 0 123568899
Q ss_pred HHHHHHhc
Q 043304 388 AKIELAMN 395 (454)
Q Consensus 388 ~ai~~vl~ 395 (454)
++|++++.
T Consensus 469 ~ai~ral~ 476 (536)
T 3vue_A 469 ATLKRAIK 476 (536)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 54
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=60.23 E-value=14 Score=34.88 Aligned_cols=87 Identities=17% Similarity=0.268 Sum_probs=52.5
Q ss_pred CceEEEecCCcc---CCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecc--
Q 043304 249 SSVLYVSFGSQN---TIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKW-- 323 (454)
Q Consensus 249 ~~vvyvsfGS~~---~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w-- 323 (454)
+.+|.+.-||.. .++.+.+.++++.|.+.+.++++ ++++. + ..+-+.+.+... ...+.+.+-
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~------e----~~~~~~i~~~~~--~~~~~l~g~~s 251 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPM------D----LEMVQPVVEQME--TKPIVATGKFQ 251 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTT------T----HHHHHHHHHTCS--SCCEECTTCCC
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcc------h----HHHHHHHHHhcc--cccEEeeCCCC
Confidence 348888888753 58899999999999777888876 44331 1 011122222222 222222222
Q ss_pred cchH-HHhcccCcceeEE---------EecCCceeec
Q 043304 324 APQV-EILSHRTISAFLT---------LSHGVPIIGW 350 (454)
Q Consensus 324 ~pq~-~vL~h~~vg~fvt---------l~~GvP~l~~ 350 (454)
+.|. .++++.+ ++|+ ...|+|+|++
T Consensus 252 l~e~~ali~~a~--~~i~~DsG~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 252 LGPLAAAMNRCN--LLITNDSGPMHVGISQGVPIVAL 286 (349)
T ss_dssp HHHHHHHHHTCS--EEEEESSHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHhCC--EEEECCCCHHHHHHhcCCCEEEE
Confidence 2233 3777766 7888 6789999986
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=59.02 E-value=4.3 Score=39.60 Aligned_cols=71 Identities=14% Similarity=0.074 Sum_probs=47.4
Q ss_pred CcEEEecccchHH---HhcccCcceeEE------------EecCCceeeccccccccchHHHHHHhhceeEEEecCCCcc
Q 043304 316 QGLVVHKWAPQVE---ILSHRTISAFLT------------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCVEVARGLTCE 380 (454)
Q Consensus 316 ~~~~~~~w~pq~~---vL~h~~vg~fvt------------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 380 (454)
.++...+++|+.+ +++...+..+-+ +++|+|+|+ -..+ ....+.+- ..|+.++.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~----- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ----- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-----
T ss_pred CcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-----
Confidence 4677778988776 455555433322 999999998 3222 12233333 46877754
Q ss_pred cCHHHHHHHHHHHhcCC
Q 043304 381 VLKEDLSAKIELAMNET 397 (454)
Q Consensus 381 ~~~~~l~~ai~~vl~~~ 397 (454)
-+.++++++|.++++++
T Consensus 364 ~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 364 LNPENIAETLVELCMSF 380 (413)
T ss_dssp CSHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcCH
Confidence 47899999999999877
No 56
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=52.74 E-value=14 Score=33.38 Aligned_cols=30 Identities=23% Similarity=0.208 Sum_probs=22.5
Q ss_pred CCcEEEe----------CCCcchHHHHH---HHhCCceEEEcc
Q 043304 87 KPLCIIT----------DSFLGWCKETA---QEYGIFHAIFIG 116 (454)
Q Consensus 87 ~~D~vI~----------D~~~~~~~~vA---~~lgIP~v~~~~ 116 (454)
+||+||+ |.++..+...| ..+|||.|.++-
T Consensus 85 ~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 85 KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 7999998 66666555444 558999999874
No 57
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=50.43 E-value=20 Score=28.69 Aligned_cols=32 Identities=6% Similarity=-0.073 Sum_probs=24.5
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-------CCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-------GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~~ 118 (454)
+||+||.|..++ -|..+++++ ++|.|.++...
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 799999999887 566777654 48888776554
No 58
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=50.16 E-value=13 Score=36.68 Aligned_cols=31 Identities=13% Similarity=-0.136 Sum_probs=20.6
Q ss_pred CCcEEEeCCCcc--hHHHHHHHhCCceEEEcch
Q 043304 87 KPLCIITDSFLG--WCKETAQEYGIFHAIFIGG 117 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~lgIP~v~~~~~ 117 (454)
+||+|.+..... .+..++..+|+|+|...-.
T Consensus 120 ~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~ 152 (499)
T 2r60_A 120 FPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152 (499)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred CCCEEEEcCCcchHHHHHHHHhcCCcEEEEccC
Confidence 699999875432 2234567789998865433
No 59
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=48.75 E-value=16 Score=28.84 Aligned_cols=29 Identities=14% Similarity=-0.134 Sum_probs=21.3
Q ss_pred CCcEEEeCCCcc--hHHHHHHH---hCCceEEEc
Q 043304 87 KPLCIITDSFLG--WCKETAQE---YGIFHAIFI 115 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~---lgIP~v~~~ 115 (454)
+||+||.|..++ -+..++++ .++|.|.++
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 799999999876 55566655 478876553
No 60
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=39.62 E-value=46 Score=25.16 Aligned_cols=32 Identities=13% Similarity=0.078 Sum_probs=23.1
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-------CCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-------GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~~ 118 (454)
+||+||.|..++ -+..+++++ ++|.+.++...
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 799999998765 455666654 57888776543
No 61
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=37.50 E-value=66 Score=28.85 Aligned_cols=39 Identities=18% Similarity=0.342 Sum_probs=31.2
Q ss_pred CceEEEecCCccCCCHHHHHHHHHHHHh--CCCceEEEEcC
Q 043304 249 SSVLYVSFGSQNTIAASQMMQLAMALEA--SGKNFIWVVRP 287 (454)
Q Consensus 249 ~~vvyvsfGS~~~~~~~~~~~~~~al~~--~~~~~lw~~~~ 287 (454)
.++|+|+|||......+.+..+.+.+++ .+.++-|.+..
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 3599999999876666688888888876 36788898764
No 62
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=37.26 E-value=56 Score=30.05 Aligned_cols=128 Identities=13% Similarity=0.049 Sum_probs=71.1
Q ss_pred CceEEEecCCcc---CCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCCchhhhccCCChhHHHhhccCCCcEEEecc--
Q 043304 249 SSVLYVSFGSQN---TIAASQMMQLAMALEASGKNFIWVVRPPIGFDINSEFKAKEWLPQGFEEKIKGSGQGLVVHKW-- 323 (454)
Q Consensus 249 ~~vvyvsfGS~~---~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w-- 323 (454)
++.|.+.-|+.. .++.+.+.++++.|.+.+.++++..+++. + ..+-+.+.+.. .++.+.+-
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~-------e---~~~~~~i~~~~----~~~~l~g~~s 243 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH-------E---EERAKRLAEGF----AYVEVLPKMS 243 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH-------H---HHHHHHHHTTC----TTEEECCCCC
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH-------H---HHHHHHHHhhC----CcccccCCCC
Confidence 347888888754 58899999999998776777776544221 1 00111111111 12222222
Q ss_pred cchH-HHhcccCcceeEE---------EecCCceeeccccccccchHHHHHHhhceeE-EEe--cCCCcccCHHHHHHHH
Q 043304 324 APQV-EILSHRTISAFLT---------LSHGVPIIGWPLAGEQFYNSKLLEEEIGVCV-EVA--RGLTCEVLKEDLSAKI 390 (454)
Q Consensus 324 ~pq~-~vL~h~~vg~fvt---------l~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~-~l~--~~~~~~~~~~~l~~ai 390 (454)
+.+. .++++.+ ++|+ .+.|+|+|++ |+.. +..+- .-||-.. .+. ......++.+++.+++
T Consensus 244 l~el~ali~~a~--l~I~~DSG~~HlAaa~g~P~v~l--fg~t--~p~~~-~P~~~~~~~~~~~~~cm~~I~~~~V~~~i 316 (326)
T 2gt1_A 244 LEGVARVLAGAK--FVVSVDTGLSHLTAALDRPNITV--YGPT--DPGLI-GGYGKNQMVCRAPGNELSQLTANAVKQFI 316 (326)
T ss_dssp HHHHHHHHHTCS--EEEEESSHHHHHHHHTTCCEEEE--ESSS--CHHHH-CCCSSSEEEEECGGGCGGGCCHHHHHHHH
T ss_pred HHHHHHHHHhCC--EEEecCCcHHHHHHHcCCCEEEE--ECCC--Chhhc-CCCCCCceEecCCcccccCCCHHHHHHHH
Confidence 2233 3777766 7888 6789999987 2111 11110 0112111 111 1122578999999999
Q ss_pred HHHhcCC
Q 043304 391 ELAMNET 397 (454)
Q Consensus 391 ~~vl~~~ 397 (454)
+++|.+-
T Consensus 317 ~~~l~~~ 323 (326)
T 2gt1_A 317 EENAEKA 323 (326)
T ss_dssp HHTTTTC
T ss_pred HHHHHHh
Confidence 9998754
No 63
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=34.47 E-value=23 Score=37.82 Aligned_cols=29 Identities=24% Similarity=0.229 Sum_probs=21.0
Q ss_pred CCcEEEeCCCcc--hHHHHHHHhCCceEEEc
Q 043304 87 KPLCIITDSFLG--WCKETAQEYGIFHAIFI 115 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~lgIP~v~~~ 115 (454)
+||+|.+..... .+..+|..+|||.|...
T Consensus 407 ~PDVIHsH~~~sglva~llar~~gvP~V~T~ 437 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKLGVTQCTIA 437 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCeEEEeCCchHHHHHHHHHHHcCCCEEEEE
Confidence 799999875332 34567788999988653
No 64
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=34.07 E-value=46 Score=28.51 Aligned_cols=45 Identities=18% Similarity=0.274 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcchhHH
Q 043304 69 EPHFKKLISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIGGGGF 120 (454)
Q Consensus 69 ~~~l~~lL~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~ 120 (454)
...++..++++.+. .+++||-|.. +..+|+++|+|.+.+.++.-.
T Consensus 128 ~~e~~~~i~~l~~~----G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 128 EDEITTLISKVKTE----NIKIVVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGGHHHHHHHHHHT----TCCEEEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHHC----CCeEEECCHH---HHHHHHHcCCcEEEEecCHHH
Confidence 35667777777654 6999999864 689999999999998775433
No 65
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=33.96 E-value=71 Score=30.44 Aligned_cols=31 Identities=10% Similarity=-0.217 Sum_probs=20.7
Q ss_pred CCcEEEeCCCcc--hHHHHHHHhCCceEEEcch
Q 043304 87 KPLCIITDSFLG--WCKETAQEYGIFHAIFIGG 117 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~lgIP~v~~~~~ 117 (454)
+||+|++..... .+..++..+|+|+|...-.
T Consensus 122 ~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 122 TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 499999875432 2334567789998876443
No 66
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=33.59 E-value=45 Score=32.88 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEE
Q 043304 71 HFKKLISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIF 114 (454)
Q Consensus 71 ~l~~lL~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~ 114 (454)
.+++++++. +||++|.... ...+|+++|||++.+
T Consensus 366 ~le~~i~~~-------~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAG-------QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHH-------TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhc-------CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 466777777 8999999864 678999999998865
No 67
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=30.12 E-value=77 Score=24.36 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=22.3
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-------CCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-------GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~~ 118 (454)
+||+||.|..++ -+..+++++ ++|.+.++...
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 799999998765 455555443 57888776553
No 68
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=29.40 E-value=59 Score=25.40 Aligned_cols=31 Identities=6% Similarity=-0.054 Sum_probs=21.9
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh---------CCceEEEcch
Q 043304 87 KPLCIITDSFLG--WCKETAQEY---------GIFHAIFIGG 117 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l---------gIP~v~~~~~ 117 (454)
+||+||.|..++ -+..+++.+ .+|.+.++..
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 799999998765 455666554 2787777654
No 69
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=29.31 E-value=51 Score=30.50 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=28.3
Q ss_pred CceEEEecCC-c-c--CCCHHHHHHHHHHHHhCCCceEEE
Q 043304 249 SSVLYVSFGS-Q-N--TIAASQMMQLAMALEASGKNFIWV 284 (454)
Q Consensus 249 ~~vvyvsfGS-~-~--~~~~~~~~~~~~al~~~~~~~lw~ 284 (454)
++.|.+.-|| . . .++.+.+.++++.|.+.+.++++.
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~ 219 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF 219 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE
Confidence 3488888888 3 2 578999999999998778887764
No 70
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=28.00 E-value=82 Score=23.48 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=22.2
Q ss_pred CCcEEEeCCCcc--hHHHHHHH----hCCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQE----YGIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~----lgIP~v~~~~~~ 118 (454)
+||+||.|..++ -+..++++ .++|.+.++...
T Consensus 46 ~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 46 QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 799999998776 34455544 368888776543
No 71
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=26.78 E-value=79 Score=26.88 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=32.5
Q ss_pred chHHHHHHhhceeEEEecCCCcccCHHHHHHHHHHHhcCCc---hhHHHHHHHHHHHHHHHH
Q 043304 358 YNSKLLEEEIGVCVEVARGLTCEVLKEDLSAKIELAMNETE---KGTDLRNKAKEVKVIIKN 416 (454)
Q Consensus 358 ~na~~~~~~~g~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~---~~~~~~~~a~~l~~~~~~ 416 (454)
..+.+=+.. |+|+.+ |+++|.++|.++++... ..++|+ +.-.+-..+|+
T Consensus 103 d~~~Fe~~c-GVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~ 154 (187)
T 3tl4_X 103 TKMGMNENS-GVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKN 154 (187)
T ss_dssp CHHHHHHTT-TTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHT
T ss_pred CHHHHHHHC-CCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhc
Confidence 333333344 888875 77999999999986431 133566 77777777775
No 72
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=26.49 E-value=86 Score=27.49 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEEcc
Q 043304 69 EPHFKKLISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIFIG 116 (454)
Q Consensus 69 ~~~l~~lL~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~ 116 (454)
...++..++++.+. .+++||-|.. +..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~----G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN----GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT----TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC----CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 55778888887654 6999998864 68999999999999874
No 73
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=25.29 E-value=76 Score=26.18 Aligned_cols=27 Identities=26% Similarity=0.266 Sum_probs=22.7
Q ss_pred eEEEecCCccCCCHHHHHHHHHHHHhC
Q 043304 251 VLYVSFGSQNTIAASQMMQLAMALEAS 277 (454)
Q Consensus 251 vvyvsfGS~~~~~~~~~~~~~~al~~~ 277 (454)
+.|+|+||....+.+.++..+..|.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 679999999877778888888888875
No 74
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=24.54 E-value=80 Score=26.04 Aligned_cols=27 Identities=26% Similarity=0.266 Sum_probs=23.5
Q ss_pred eEEEecCCccCCCHHHHHHHHHHHHhC
Q 043304 251 VLYVSFGSQNTIAASQMMQLAMALEAS 277 (454)
Q Consensus 251 vvyvsfGS~~~~~~~~~~~~~~al~~~ 277 (454)
.+|+++||....+...++..+.+|.+.
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 689999999887888888888888875
No 75
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=24.06 E-value=96 Score=25.58 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=24.5
Q ss_pred eEEEecCCccCCCHHHHHHHHHHHHhCC
Q 043304 251 VLYVSFGSQNTIAASQMMQLAMALEASG 278 (454)
Q Consensus 251 vvyvsfGS~~~~~~~~~~~~~~al~~~~ 278 (454)
.+|+++||....+.+.++..+.+|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999999889999999999998853
No 76
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=23.95 E-value=1.5e+02 Score=21.73 Aligned_cols=32 Identities=16% Similarity=0.066 Sum_probs=21.9
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-----CCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-----GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~~ 118 (454)
+||+||.|...+ .+..+++++ ++|.+.++...
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 699999998765 344555443 57887776553
No 77
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=23.83 E-value=1.3e+02 Score=22.76 Aligned_cols=32 Identities=19% Similarity=0.118 Sum_probs=21.9
Q ss_pred CCcEEEeCCCcc---hHHHHHHHh----CCceEEEcchh
Q 043304 87 KPLCIITDSFLG---WCKETAQEY----GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~---~~~~vA~~l----gIP~v~~~~~~ 118 (454)
+||+||.|...+ .+..+++.+ ++|+|+++...
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 799999997653 344555443 78888876553
No 78
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=23.59 E-value=88 Score=28.16 Aligned_cols=88 Identities=15% Similarity=0.119 Sum_probs=47.0
Q ss_pred CCcEEEEEeCCcChhhhhhcCCCCCCeEEEEccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHhhchHHHHHHHHHHhhc
Q 043304 3 QSLLQTLVNTPLNLKRLKSSLPQNSSIHLLEIPFNSIEHDLPPCTENTDSIPHHLFPRFLQASASLEPHFKKLISELVNE 82 (454)
Q Consensus 3 rG~~VT~~t~~~~~~~v~~~~~~~~gi~f~~ip~~~~~dgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~~~ 82 (454)
.+|+|+++.+...++-....+.-..-+++..+. ++.-..++-|. .....++.. ++. .
T Consensus 36 ~~~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~---------~~~~~v~GTPa---DCV~lal~~-------l~~-~--- 92 (261)
T 3ty2_A 36 DLGEVDVVAPDRNRSGASNSLTLNAPLHIKNLE---------NGMISVEGTPT---DCVHLAITG-------VLP-E--- 92 (261)
T ss_dssp TTSEEEEEEESSCCTTCTTCCCCSSCEEEEECT---------TSCEEESSCHH---HHHHHHTTT-------TSS-S---
T ss_pred hcCCEEEEecCCCCcCcccceecCCCeEEEEec---------CCeEEECCCHH---HHHHHHHHH-------hcC-C---
Confidence 478999999888876554433211235555433 11112222221 122222221 111 1
Q ss_pred cCCCCCcEEEe----------CCCcchHHHHH---HHhCCceEEEcch
Q 043304 83 QNGQKPLCIIT----------DSFLGWCKETA---QEYGIFHAIFIGG 117 (454)
Q Consensus 83 ~~g~~~D~vI~----------D~~~~~~~~vA---~~lgIP~v~~~~~ 117 (454)
+||+||+ |.++..+...| ..+|||.|.++..
T Consensus 93 ----~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 93 ----MPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp ----CCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred ----CCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 7999996 45555555555 3479999998754
No 79
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=23.02 E-value=1.2e+02 Score=23.23 Aligned_cols=31 Identities=16% Similarity=0.095 Sum_probs=21.1
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-------CCceEEEcch
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-------GIFHAIFIGG 117 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 117 (454)
+||+||.|...+ -+..+++.+ .+|.+.++..
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 699999998765 355555543 4677776544
No 80
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=22.93 E-value=37 Score=29.89 Aligned_cols=43 Identities=19% Similarity=0.037 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEeCCCcc-------hHHHHHHHhCCceEEEcch
Q 043304 70 PHFKKLISELVNEQNGQKPLCIITDSFLG-------WCKETAQEYGIFHAIFIGG 117 (454)
Q Consensus 70 ~~l~~lL~~~~~~~~g~~~D~vI~D~~~~-------~~~~vA~~lgIP~v~~~~~ 117 (454)
+.+.++++.+.. +||+|++|-... -+..+.-.+|+|.|.+.-+
T Consensus 91 P~~l~al~~L~~-----~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 91 PLFLKAWEKLRT-----KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHHHTTCCS-----CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHHhcCC-----CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 445555666632 699999996533 2334455568999887543
No 81
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=22.82 E-value=1.5e+02 Score=22.35 Aligned_cols=32 Identities=22% Similarity=0.037 Sum_probs=21.8
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-----CCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-----GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~~ 118 (454)
+||+||.|...+ -+..+++++ ++|.+.++...
T Consensus 49 ~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 49 NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 699999998765 345555443 57887776543
No 82
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=22.16 E-value=1.4e+02 Score=22.19 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=21.8
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-----CCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-----GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~~ 118 (454)
+||+||.|...+ -+..+++++ ++|.+.++...
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 47 RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 699999998765 445555443 57888776543
No 83
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=22.10 E-value=96 Score=25.67 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=23.4
Q ss_pred eEEEecCCccCCCHHHHHHHHHHHHhC
Q 043304 251 VLYVSFGSQNTIAASQMMQLAMALEAS 277 (454)
Q Consensus 251 vvyvsfGS~~~~~~~~~~~~~~al~~~ 277 (454)
.+|+++||....+.+.++..+.+|.+.
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~ 32 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEY 32 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 799999999877788888888888874
No 84
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=21.80 E-value=1.7e+02 Score=21.22 Aligned_cols=32 Identities=22% Similarity=0.127 Sum_probs=21.9
Q ss_pred CCcEEEeCCCcc--hHHHHHHH----hCCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQE----YGIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~----lgIP~v~~~~~~ 118 (454)
+||+||.|...+ .+..+++. -.+|.+.++...
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 699999998764 34455544 368888776553
No 85
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.60 E-value=95 Score=22.13 Aligned_cols=49 Identities=18% Similarity=0.333 Sum_probs=33.6
Q ss_pred ecCCceeeccccccccchHHH---HHHhhceeEEEecCCCcccCHHHHHHHHHHHhc
Q 043304 342 SHGVPIIGWPLAGEQFYNSKL---LEEEIGVCVEVARGLTCEVLKEDLSAKIELAMN 395 (454)
Q Consensus 342 ~~GvP~l~~P~~~DQ~~na~~---~~~~~g~G~~l~~~~~~~~~~~~l~~ai~~vl~ 395 (454)
-.|+|++++--.+.|...... ..+. |+...+-+ ...+++|...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvlk----stdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK----STDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE----CCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc----cCCHHHHHHHHHHHHH
Confidence 378999988777777654332 3334 66666554 5678999999988774
No 86
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=21.55 E-value=1.5e+02 Score=21.77 Aligned_cols=31 Identities=23% Similarity=-0.007 Sum_probs=19.8
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-------CCceEEEcch
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-------GIFHAIFIGG 117 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 117 (454)
+||+||.|...+ -+..+++++ .+|.+.++..
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 45 KPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 699999998765 345555443 4677776544
No 87
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=21.42 E-value=1.5e+02 Score=22.46 Aligned_cols=32 Identities=6% Similarity=-0.087 Sum_probs=21.4
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-------CCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-------GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~~ 118 (454)
+||+||.|...+ -+..+++.+ ++|.++++...
T Consensus 50 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 50 PYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 799999998764 344555432 57877776553
No 88
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=21.08 E-value=94 Score=25.68 Aligned_cols=27 Identities=19% Similarity=0.287 Sum_probs=23.4
Q ss_pred eEEEecCCccCCCHHHHHHHHHHHHhC
Q 043304 251 VLYVSFGSQNTIAASQMMQLAMALEAS 277 (454)
Q Consensus 251 vvyvsfGS~~~~~~~~~~~~~~al~~~ 277 (454)
.+|+++||....+.+.++..+.+|.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 29 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQL 29 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhC
Confidence 589999999887888888888888875
No 89
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=20.93 E-value=1.5e+02 Score=21.81 Aligned_cols=32 Identities=19% Similarity=0.120 Sum_probs=21.6
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh-----CCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQEY-----GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~~ 118 (454)
+||+||.|...+ .+..+++++ ++|.+.++...
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 47 RPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 799999998765 344555443 57888776543
No 90
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=20.89 E-value=1.2e+02 Score=26.35 Aligned_cols=45 Identities=16% Similarity=-0.036 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhcc-CCCCCcEEEeCCCcchHHHHHHHhCCceEEEcc
Q 043304 71 HFKKLISELVNEQ-NGQKPLCIITDSFLGWCKETAQEYGIFHAIFIG 116 (454)
Q Consensus 71 ~l~~lL~~~~~~~-~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~ 116 (454)
.++++++...... .. ...+||+|--...+...|+++|||...+.+
T Consensus 15 nl~ali~~~~~~~l~~-eI~~Visn~~~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 15 NAEAIIQSQKAGQLPC-EVALLITDKPGAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp HHHHHHHHHHTTCCSS-EEEEEEESCSSSHHHHHHHTTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCc-EEEEEEECCCCcHHHHHHHHcCCCEEEeCh
Confidence 4666666543210 11 357899986555677899999999887654
No 91
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=20.72 E-value=94 Score=28.89 Aligned_cols=39 Identities=15% Similarity=0.087 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhhccCCCCCcEEEeCC--CcchH-HHHHHHhCCceEEEc
Q 043304 70 PHFKKLISELVNEQNGQKPLCIITDS--FLGWC-KETAQEYGIFHAIFI 115 (454)
Q Consensus 70 ~~l~~lL~~~~~~~~g~~~D~vI~D~--~~~~~-~~vA~~lgIP~v~~~ 115 (454)
..+.+++++. +||+|++.. ...+. ..+|..+|+|++...
T Consensus 76 ~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 117 (384)
T 1vgv_A 76 EGLKPILAEF-------KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVE 117 (384)
T ss_dssp HHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHHTTTCCEEEES
T ss_pred HHHHHHHHHh-------CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEe
Confidence 4566777777 899999853 23333 345677899988654
No 92
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=20.23 E-value=76 Score=31.53 Aligned_cols=36 Identities=22% Similarity=0.164 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHhhccCCCCCcEEEeCCCcchHHHHHHHhCCceEEE
Q 043304 69 EPHFKKLISELVNEQNGQKPLCIITDSFLGWCKETAQEYGIFHAIF 114 (454)
Q Consensus 69 ~~~l~~lL~~~~~~~~g~~~D~vI~D~~~~~~~~vA~~lgIP~v~~ 114 (454)
...+++++++. +||++|... ....+|+++|||++-+
T Consensus 406 ~~el~~~i~~~-------~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 406 GYEFEEFVKRI-------KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHHHH-------CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHHHhc-------CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 34566777777 899999864 4678999999999853
No 93
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=20.15 E-value=1.5e+02 Score=21.84 Aligned_cols=32 Identities=13% Similarity=-0.063 Sum_probs=21.8
Q ss_pred CCcEEEeCCCcc--hHHHHHHHh----CCceEEEcchh
Q 043304 87 KPLCIITDSFLG--WCKETAQEY----GIFHAIFIGGG 118 (454)
Q Consensus 87 ~~D~vI~D~~~~--~~~~vA~~l----gIP~v~~~~~~ 118 (454)
+||+||.|...+ -+..+++.+ .+|.+.++...
T Consensus 46 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 46 SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 699999998764 455555554 57777765543
Done!