Query 043305
Match_columns 892
No_of_seqs 566 out of 3947
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 03:40:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043305.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043305hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 1E-210 3E-215 1777.0 49.8 824 29-891 3-1002(1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 4E-138 9E-143 1184.7 52.4 732 150-891 6-962 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 9E-127 2E-131 1188.2 76.1 751 111-891 14-935 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-120 7E-125 1130.5 73.2 733 149-890 8-1040(1053)
5 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1E-117 3E-122 1109.1 70.0 735 149-890 18-978 (997)
6 TIGR01522 ATPase-IIA2_Ca golgi 100.0 4E-117 9E-122 1095.3 72.3 699 149-891 5-876 (884)
7 COG0474 MgtA Cation transport 100.0 3E-116 7E-121 1084.9 59.3 704 155-884 32-901 (917)
8 PRK15122 magnesium-transportin 100.0 1E-111 3E-116 1042.6 68.6 681 151-890 30-890 (903)
9 PRK10517 magnesium-transportin 100.0 1E-109 2E-114 1023.7 63.6 672 151-883 52-885 (902)
10 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-108 4E-113 1013.7 68.8 677 151-890 18-855 (867)
11 TIGR01116 ATPase-IIA1_Ca sarco 100.0 7E-108 1E-112 1015.5 68.8 622 262-891 234-912 (917)
12 KOG0203 Na+/K+ ATPase, alpha s 100.0 4E-105 8E-110 910.9 26.9 732 151-890 42-1000(1019)
13 TIGR01657 P-ATPase-V P-type AT 100.0 2.5E-97 6E-102 932.2 58.8 575 265-872 396-1046(1054)
14 TIGR01647 ATPase-IIIA_H plasma 100.0 1.4E-95 3E-100 888.2 59.3 515 264-855 233-751 (755)
15 TIGR01652 ATPase-Plipid phosph 100.0 3.3E-85 7.1E-90 824.7 53.3 604 182-821 229-971 (1057)
16 PLN03190 aminophospholipid tra 100.0 1.7E-76 3.8E-81 740.1 59.9 503 268-786 394-1039(1178)
17 KOG0208 Cation transport ATPas 100.0 1E-68 2.3E-73 620.6 35.8 572 265-871 416-1095(1140)
18 PRK14010 potassium-transportin 100.0 5.7E-67 1.2E-71 619.9 41.9 343 266-713 247-589 (673)
19 PRK01122 potassium-transportin 100.0 1.6E-64 3.6E-69 599.5 43.5 333 267-702 248-581 (679)
20 KOG0206 P-type ATPase [General 100.0 2.8E-66 6E-71 628.5 24.3 569 188-785 265-961 (1151)
21 TIGR01497 kdpB K+-transporting 100.0 3.6E-60 7.8E-65 561.2 42.5 337 267-704 249-585 (675)
22 KOG0210 P-type ATPase [Inorgan 100.0 6.8E-61 1.5E-65 535.4 25.0 578 264-882 350-1025(1051)
23 KOG0205 Plasma membrane H+-tra 100.0 3.1E-57 6.7E-62 504.3 33.1 395 279-732 289-688 (942)
24 TIGR01494 ATPase_P-type ATPase 100.0 9.2E-54 2E-58 502.3 39.7 322 264-738 177-498 (499)
25 KOG0209 P-type ATPase [Inorgan 100.0 5.6E-53 1.2E-57 479.8 44.6 560 273-872 435-1121(1160)
26 COG2217 ZntA Cation transport 100.0 7.1E-52 1.5E-56 491.6 39.5 371 190-710 312-682 (713)
27 PRK11033 zntA zinc/cadmium/mer 100.0 1.2E-49 2.7E-54 484.1 43.2 382 191-737 344-727 (741)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 6.9E-48 1.5E-52 457.5 42.8 373 192-711 158-531 (556)
29 KOG0207 Cation transport ATPas 100.0 9E-48 2E-52 447.5 30.7 340 262-708 527-866 (951)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 7.4E-46 1.6E-50 439.4 41.0 323 266-709 226-548 (562)
31 PRK10671 copA copper exporting 100.0 1.9E-45 4.1E-50 455.0 41.6 330 264-708 464-793 (834)
32 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.5E-45 3.2E-50 435.2 37.2 311 267-710 196-509 (536)
33 COG2216 KdpB High-affinity K+ 100.0 6.3E-39 1.4E-43 351.9 21.5 319 269-687 251-569 (681)
34 PF00689 Cation_ATPase_C: Cati 99.9 1.3E-26 2.9E-31 236.6 13.7 175 716-891 1-179 (182)
35 PF00702 Hydrolase: haloacid d 99.9 5E-25 1.1E-29 229.1 11.9 97 516-646 115-215 (215)
36 KOG4383 Uncharacterized conser 99.7 2.2E-17 4.7E-22 185.9 14.0 307 444-752 698-1150(1354)
37 PF13246 Hydrolase_like2: Puta 99.6 3.5E-16 7.6E-21 141.7 5.8 73 383-456 17-91 (91)
38 PF00690 Cation_ATPase_N: Cati 99.5 6.3E-14 1.4E-18 120.3 6.3 67 150-218 3-69 (69)
39 COG4087 Soluble P-type ATPase 99.5 3.2E-13 7E-18 125.8 11.0 125 518-679 20-146 (152)
40 smart00831 Cation_ATPase_N Cat 99.4 6.4E-13 1.4E-17 112.3 5.9 62 159-222 2-63 (64)
41 PF12515 CaATP_NAI: Ca2+-ATPas 99.4 3E-13 6.5E-18 103.8 3.1 45 28-73 1-46 (47)
42 PRK10513 sugar phosphate phosp 98.9 9.2E-09 2E-13 111.7 13.0 66 614-680 196-265 (270)
43 TIGR01487 SPP-like sucrose-pho 98.9 5E-09 1.1E-13 110.0 10.2 148 528-678 18-214 (215)
44 PRK01158 phosphoglycolate phos 98.9 1.1E-08 2.4E-13 108.2 12.7 152 528-680 20-226 (230)
45 TIGR01482 SPP-subfamily Sucros 98.9 1.5E-08 3.2E-13 106.8 12.9 152 528-680 15-222 (225)
46 PRK10976 putative hydrolase; P 98.9 1.8E-08 3.8E-13 109.3 13.2 66 614-680 190-261 (266)
47 PRK15126 thiamin pyrimidine py 98.9 1.3E-08 2.8E-13 110.8 12.0 152 528-680 19-259 (272)
48 COG0561 Cof Predicted hydrolas 98.9 2.6E-08 5.6E-13 107.9 13.7 152 529-681 21-259 (264)
49 TIGR02137 HSK-PSP phosphoserin 98.8 2E-08 4.4E-13 104.7 11.8 130 528-682 68-198 (203)
50 PRK11133 serB phosphoserine ph 98.8 2.6E-08 5.6E-13 110.9 11.6 130 528-679 181-315 (322)
51 TIGR00338 serB phosphoserine p 98.8 2.6E-08 5.7E-13 104.6 9.9 129 528-678 85-218 (219)
52 PRK10530 pyridoxal phosphate ( 98.8 5.9E-08 1.3E-12 105.3 12.5 66 614-680 199-268 (272)
53 PF08282 Hydrolase_3: haloacid 98.7 3.8E-08 8.1E-13 104.2 10.3 151 528-679 15-254 (254)
54 PLN02887 hydrolase family prot 98.7 1.1E-07 2.3E-12 113.2 13.3 66 614-680 507-576 (580)
55 TIGR02726 phenyl_P_delta pheny 98.7 7.7E-08 1.7E-12 97.3 9.7 102 535-671 41-142 (169)
56 TIGR01486 HAD-SF-IIB-MPGP mann 98.6 3E-07 6.5E-12 99.3 13.8 151 529-680 17-253 (256)
57 TIGR01670 YrbI-phosphatas 3-de 98.6 1.9E-07 4.1E-12 93.1 10.1 97 536-671 36-136 (154)
58 PRK03669 mannosyl-3-phosphogly 98.6 7.1E-07 1.5E-11 97.2 14.1 152 529-680 25-265 (271)
59 TIGR00099 Cof-subfamily Cof su 98.6 3.2E-07 6.8E-12 99.0 11.0 65 613-678 187-255 (256)
60 PRK00192 mannosyl-3-phosphogly 98.4 2.3E-06 5.1E-11 93.3 13.9 152 528-680 21-267 (273)
61 COG0560 SerB Phosphoserine pho 98.4 8.7E-07 1.9E-11 93.1 9.9 116 527-667 76-199 (212)
62 PRK09484 3-deoxy-D-manno-octul 98.4 1.2E-06 2.5E-11 90.0 8.6 110 535-683 55-172 (183)
63 PRK13582 thrH phosphoserine ph 98.3 2E-06 4.4E-11 89.2 10.4 125 528-679 68-195 (205)
64 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 2.7E-06 5.9E-11 87.7 9.6 117 528-664 80-200 (201)
65 TIGR02471 sucr_syn_bact_C sucr 98.2 7.6E-06 1.7E-10 87.2 12.1 66 614-680 159-232 (236)
66 PF12710 HAD: haloacid dehalog 98.1 2.9E-06 6.4E-11 86.7 5.5 92 531-643 92-192 (192)
67 TIGR03333 salvage_mtnX 2-hydro 98.1 1.7E-05 3.8E-10 83.3 11.2 136 527-680 69-209 (214)
68 PLN02954 phosphoserine phospha 98.1 2.1E-05 4.5E-10 82.9 11.6 128 528-678 84-222 (224)
69 PRK08238 hypothetical protein; 98.1 0.00061 1.3E-08 80.0 24.3 94 528-652 72-165 (479)
70 COG1778 Low specificity phosph 98.1 1.1E-05 2.3E-10 78.7 7.8 118 535-691 42-167 (170)
71 KOG1615 Phosphoserine phosphat 98.0 1.3E-05 2.8E-10 80.6 7.2 110 528-652 88-199 (227)
72 TIGR01485 SPP_plant-cyano sucr 98.0 5.8E-05 1.3E-09 81.2 12.7 154 526-680 19-244 (249)
73 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2.9E-05 6.3E-10 79.0 9.2 113 528-650 72-186 (188)
74 PF00122 E1-E2_ATPase: E1-E2 A 97.9 1.8E-05 3.9E-10 83.8 7.6 89 192-313 142-230 (230)
75 PRK09552 mtnX 2-hydroxy-3-keto 97.9 2.8E-05 6E-10 82.0 8.2 135 528-680 74-213 (219)
76 TIGR02461 osmo_MPG_phos mannos 97.9 4.4E-05 9.6E-10 81.0 8.8 43 527-569 14-56 (225)
77 TIGR01488 HAD-SF-IB Haloacid D 97.9 3.6E-05 7.7E-10 77.7 7.6 97 528-645 73-177 (177)
78 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 6.9E-05 1.5E-09 77.6 9.7 107 526-652 85-197 (202)
79 PRK13222 phosphoglycolate phos 97.8 9.9E-05 2.1E-09 77.6 11.0 128 527-681 92-223 (226)
80 cd01427 HAD_like Haloacid deha 97.8 6.1E-05 1.3E-09 71.3 7.2 117 524-649 20-137 (139)
81 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.00015 3.2E-09 76.4 10.3 39 530-568 18-56 (221)
82 COG0546 Gph Predicted phosphat 97.7 0.0003 6.6E-09 74.3 11.3 127 526-679 87-217 (220)
83 PLN02382 probable sucrose-phos 97.6 0.00074 1.6E-08 78.1 13.6 151 529-680 29-257 (413)
84 PRK14502 bifunctional mannosyl 97.5 0.00061 1.3E-08 81.7 12.2 40 529-568 434-473 (694)
85 PRK12702 mannosyl-3-phosphogly 97.5 0.00089 1.9E-08 72.9 11.5 42 528-569 18-59 (302)
86 TIGR01454 AHBA_synth_RP 3-amin 97.5 0.00052 1.1E-08 71.3 9.5 125 528-679 75-203 (205)
87 PRK13223 phosphoglycolate phos 97.3 0.001 2.2E-08 72.7 9.9 125 527-678 100-228 (272)
88 TIGR01449 PGP_bact 2-phosphogl 97.2 0.00097 2.1E-08 69.4 8.4 120 528-677 85-211 (213)
89 PRK10187 trehalose-6-phosphate 97.2 0.0016 3.4E-08 71.0 9.5 145 528-679 36-240 (266)
90 PRK13288 pyrophosphatase PpaX; 97.1 0.0025 5.4E-08 66.7 10.5 125 528-679 82-210 (214)
91 PTZ00174 phosphomannomutase; P 97.0 0.0027 5.8E-08 68.3 9.6 53 613-666 187-244 (247)
92 PRK10826 2-deoxyglucose-6-phos 96.9 0.0037 8E-08 65.9 9.4 119 528-676 92-216 (222)
93 TIGR01484 HAD-SF-IIB HAD-super 96.9 0.0035 7.5E-08 65.1 8.6 39 528-566 17-55 (204)
94 TIGR01544 HAD-SF-IE haloacid d 96.8 0.011 2.3E-07 64.5 12.3 130 528-679 121-273 (277)
95 PRK13226 phosphoglycolate phos 96.8 0.0055 1.2E-07 65.1 9.4 127 528-681 95-226 (229)
96 PRK13225 phosphoglycolate phos 96.8 0.0095 2.1E-07 65.2 11.2 119 528-679 142-267 (273)
97 PRK14501 putative bifunctional 96.6 0.017 3.7E-07 71.9 13.2 60 613-679 656-720 (726)
98 TIGR03351 PhnX-like phosphonat 96.5 0.011 2.4E-07 62.0 9.6 122 527-678 86-218 (220)
99 PRK13478 phosphonoacetaldehyde 96.5 0.014 3E-07 63.5 10.7 123 528-679 101-254 (267)
100 TIGR01545 YfhB_g-proteo haloac 96.4 0.013 2.8E-07 61.6 9.2 106 528-652 94-201 (210)
101 PRK11590 hypothetical protein; 96.3 0.016 3.5E-07 60.8 9.0 105 528-652 95-202 (211)
102 PF05116 S6PP: Sucrose-6F-phos 96.3 0.036 7.9E-07 59.7 11.8 121 537-658 28-212 (247)
103 TIGR01672 AphA HAD superfamily 96.2 0.011 2.5E-07 63.1 7.4 88 529-648 115-206 (237)
104 PRK11009 aphA acid phosphatase 96.2 0.015 3.3E-07 62.1 8.0 89 528-648 114-206 (237)
105 PLN03243 haloacid dehalogenase 96.1 0.031 6.8E-07 60.7 10.2 121 528-676 109-231 (260)
106 TIGR01422 phosphonatase phosph 96.1 0.03 6.4E-07 60.3 9.8 94 528-648 99-196 (253)
107 PLN02770 haloacid dehalogenase 96.0 0.041 8.9E-07 59.2 10.4 120 528-674 108-230 (248)
108 COG4359 Uncharacterized conser 96.0 0.016 3.5E-07 58.3 6.5 105 528-651 73-184 (220)
109 TIGR01548 HAD-SF-IA-hyp1 haloa 95.9 0.018 3.8E-07 59.5 7.0 94 526-645 104-197 (197)
110 smart00775 LNS2 LNS2 domain. T 95.8 0.038 8.3E-07 55.3 8.7 102 526-648 25-141 (157)
111 PHA02530 pseT polynucleotide k 95.7 0.023 5E-07 62.7 7.3 107 525-649 184-292 (300)
112 PRK08942 D,D-heptose 1,7-bisph 95.6 0.087 1.9E-06 53.7 10.4 127 528-679 29-176 (181)
113 PRK06698 bifunctional 5'-methy 95.5 0.069 1.5E-06 62.9 10.6 122 528-680 330-454 (459)
114 TIGR01662 HAD-SF-IIIA HAD-supe 95.5 0.082 1.8E-06 50.8 9.3 91 528-647 25-125 (132)
115 PRK11587 putative phosphatase; 95.4 0.09 2E-06 55.2 10.2 115 528-669 83-199 (218)
116 TIGR01685 MDP-1 magnesium-depe 95.3 0.069 1.5E-06 54.5 8.5 111 518-650 35-154 (174)
117 TIGR01428 HAD_type_II 2-haloal 95.3 0.04 8.7E-07 56.8 6.9 94 528-648 92-187 (198)
118 COG4030 Uncharacterized protei 95.3 0.18 3.9E-06 52.5 11.2 145 529-680 84-262 (315)
119 TIGR02253 CTE7 HAD superfamily 95.0 0.1 2.2E-06 54.6 8.9 93 528-648 94-190 (221)
120 TIGR01990 bPGM beta-phosphoglu 94.9 0.042 9E-07 55.7 5.6 91 528-648 87-180 (185)
121 PLN02575 haloacid dehalogenase 94.9 0.12 2.5E-06 59.1 9.7 120 528-675 216-337 (381)
122 PLN02580 trehalose-phosphatase 94.6 0.38 8.3E-06 55.0 12.7 62 613-679 300-373 (384)
123 PLN02779 haloacid dehalogenase 94.5 0.2 4.3E-06 55.2 10.2 119 528-669 144-264 (286)
124 TIGR02254 YjjG/YfnB HAD superf 94.5 0.15 3.3E-06 53.2 8.8 121 528-677 97-222 (224)
125 TIGR01509 HAD-SF-IA-v3 haloaci 94.4 0.11 2.3E-06 52.4 7.3 94 528-647 85-178 (183)
126 TIGR02009 PGMB-YQAB-SF beta-ph 94.1 0.078 1.7E-06 53.7 5.5 91 528-648 88-181 (185)
127 PRK06769 hypothetical protein; 94.1 0.13 2.9E-06 52.2 7.0 95 529-651 29-135 (173)
128 TIGR01668 YqeG_hyp_ppase HAD s 94.0 0.14 3.1E-06 51.8 7.1 84 528-648 43-131 (170)
129 PRK09449 dUMP phosphatase; Pro 94.0 0.28 6.1E-06 51.5 9.6 121 528-679 95-222 (224)
130 PRK14988 GMP/IMP nucleotidase; 93.9 0.13 2.8E-06 54.6 6.9 96 528-650 93-190 (224)
131 COG3769 Predicted hydrolase (H 93.9 0.45 9.8E-06 49.6 10.2 37 532-568 27-63 (274)
132 smart00577 CPDc catalytic doma 93.8 0.073 1.6E-06 52.6 4.4 92 528-650 45-139 (148)
133 PF13419 HAD_2: Haloacid dehal 93.7 0.094 2E-06 51.8 5.2 97 527-648 76-172 (176)
134 PLN02940 riboflavin kinase 93.6 0.21 4.6E-06 57.3 8.4 117 528-669 93-212 (382)
135 PLN02205 alpha,alpha-trehalose 93.5 0.4 8.7E-06 60.5 11.2 51 515-565 603-654 (854)
136 TIGR01533 lipo_e_P4 5'-nucleot 93.2 0.42 9E-06 52.1 9.3 87 526-643 116-205 (266)
137 PLN02811 hydrolase 93.0 0.24 5.1E-06 52.2 7.0 97 528-649 78-180 (220)
138 PF06888 Put_Phosphatase: Puta 93.0 0.29 6.4E-06 52.2 7.6 112 528-650 71-196 (234)
139 TIGR00685 T6PP trehalose-phosp 92.9 0.17 3.7E-06 54.4 5.9 69 606-679 159-239 (244)
140 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.9 0.93 2E-05 48.5 11.5 46 524-569 20-67 (242)
141 TIGR00213 GmhB_yaeD D,D-heptos 92.6 0.53 1.1E-05 47.8 8.7 26 529-554 27-52 (176)
142 TIGR01656 Histidinol-ppas hist 92.2 0.41 8.9E-06 47.1 7.1 96 528-648 27-140 (147)
143 TIGR01681 HAD-SF-IIIC HAD-supe 92.1 0.39 8.3E-06 46.3 6.6 39 528-566 29-68 (128)
144 PF09419 PGP_phosphatase: Mito 91.8 0.74 1.6E-05 46.6 8.5 81 526-641 57-152 (168)
145 TIGR01675 plant-AP plant acid 91.6 0.85 1.8E-05 48.5 9.1 87 527-639 119-209 (229)
146 TIGR02252 DREG-2 REG-2-like, H 91.3 0.49 1.1E-05 48.8 6.9 91 528-647 105-199 (203)
147 TIGR01549 HAD-SF-IA-v1 haloaci 91.2 0.5 1.1E-05 46.4 6.5 38 528-565 64-101 (154)
148 PRK05446 imidazole glycerol-ph 91.1 0.48 1E-05 53.7 7.0 97 528-650 30-145 (354)
149 PLN03017 trehalose-phosphatase 90.6 2.8 6E-05 47.7 12.4 46 516-562 119-166 (366)
150 TIGR01261 hisB_Nterm histidino 90.0 0.63 1.4E-05 46.8 6.1 97 528-650 29-144 (161)
151 TIGR01664 DNA-3'-Pase DNA 3'-p 90.0 1.1 2.4E-05 45.2 7.9 40 529-568 43-94 (166)
152 TIGR01691 enolase-ppase 2,3-di 89.7 0.85 1.9E-05 48.3 7.0 99 526-651 93-194 (220)
153 TIGR01686 FkbH FkbH-like domai 88.9 0.98 2.1E-05 50.6 7.2 90 528-651 31-128 (320)
154 PLN02919 haloacid dehalogenase 88.2 1.4 3E-05 57.3 8.8 120 529-674 162-284 (1057)
155 PRK10563 6-phosphogluconate ph 87.4 0.4 8.7E-06 50.3 2.7 97 528-651 88-184 (221)
156 TIGR02247 HAD-1A3-hyp Epoxide 87.4 0.74 1.6E-05 47.9 4.7 96 528-648 94-191 (211)
157 PLN02423 phosphomannomutase 87.3 2.9 6.3E-05 45.0 9.3 39 613-652 188-231 (245)
158 COG2179 Predicted hydrolase of 87.2 2.3 4.9E-05 42.8 7.6 108 478-646 20-131 (175)
159 TIGR01458 HAD-SF-IIA-hyp3 HAD- 86.2 7.9 0.00017 41.9 12.0 40 529-568 22-64 (257)
160 PLN02645 phosphoglycolate phos 82.9 2.1 4.5E-05 47.8 5.9 43 526-568 42-87 (311)
161 PHA02597 30.2 hypothetical pro 81.2 4.2 9.2E-05 41.7 7.1 94 528-649 74-170 (197)
162 PRK09456 ?-D-glucose-1-phospha 80.4 3 6.4E-05 43.0 5.6 95 528-649 84-181 (199)
163 KOG3120 Predicted haloacid deh 80.2 14 0.00029 39.1 10.0 113 528-658 84-215 (256)
164 COG0241 HisB Histidinol phosph 80.1 6.2 0.00013 40.6 7.5 101 529-648 32-144 (181)
165 TIGR01993 Pyr-5-nucltdase pyri 78.1 4.2 9.1E-05 41.2 5.8 97 528-648 84-180 (184)
166 PF08235 LNS2: LNS2 (Lipin/Ned 77.8 9.9 0.00022 38.1 8.0 103 526-648 25-141 (157)
167 TIGR01689 EcbF-BcbF capsule bi 76.9 9.6 0.00021 36.8 7.4 72 527-598 23-120 (126)
168 TIGR02251 HIF-SF_euk Dullard-l 75.3 1.9 4.2E-05 43.3 2.3 42 526-568 40-81 (162)
169 PLN02177 glycerol-3-phosphate 75.1 33 0.00072 40.9 12.9 118 529-671 111-236 (497)
170 TIGR01684 viral_ppase viral ph 74.4 7 0.00015 43.1 6.5 41 529-569 146-187 (301)
171 PF03767 Acid_phosphat_B: HAD 72.5 4.5 9.7E-05 43.2 4.4 90 527-641 114-207 (229)
172 TIGR01452 PGP_euk phosphoglyco 72.5 34 0.00074 37.4 11.5 43 526-568 16-61 (279)
173 PF13344 Hydrolase_6: Haloacid 72.4 2.3 5.1E-05 39.2 1.9 46 524-569 10-58 (101)
174 PRK10725 fructose-1-P/6-phosph 71.7 7.9 0.00017 39.1 5.9 93 530-649 90-182 (188)
175 PLN02151 trehalose-phosphatase 69.2 33 0.00071 39.1 10.5 62 613-679 268-341 (354)
176 TIGR01680 Veg_Stor_Prot vegeta 68.2 28 0.0006 38.1 9.2 87 526-639 143-235 (275)
177 COG0637 Predicted phosphatase/ 65.7 13 0.00028 39.2 6.2 97 528-649 86-182 (221)
178 PHA03398 viral phosphatase sup 65.2 11 0.00023 41.8 5.4 41 529-569 148-189 (303)
179 PF06506 PrpR_N: Propionate ca 63.5 39 0.00084 34.3 9.0 70 603-691 102-172 (176)
180 PRK10444 UMP phosphatase; Prov 63.4 7.2 0.00016 42.1 3.8 45 521-565 10-54 (248)
181 PTZ00445 p36-lilke protein; Pr 62.9 15 0.00033 38.6 5.8 93 471-587 28-121 (219)
182 TIGR01457 HAD-SF-IIA-hyp2 HAD- 61.7 14 0.0003 39.9 5.5 43 526-568 15-60 (249)
183 COG3700 AphA Acid phosphatase 61.6 19 0.00042 36.6 6.0 86 529-647 115-205 (237)
184 PRK10748 flavin mononucleotide 59.5 20 0.00043 38.1 6.3 91 528-652 113-207 (238)
185 PF13380 CoA_binding_2: CoA bi 58.9 24 0.00053 33.3 6.1 84 475-568 17-104 (116)
186 PF05822 UMPH-1: Pyrimidine 5' 58.1 54 0.0012 35.4 9.1 133 528-679 90-241 (246)
187 TIGR01663 PNK-3'Pase polynucle 53.0 42 0.0009 40.4 8.0 40 529-568 198-249 (526)
188 KOG3040 Predicted sugar phosph 51.0 30 0.00064 36.3 5.4 52 518-569 13-67 (262)
189 COG1011 Predicted hydrolase (H 49.2 1.4E+02 0.003 30.9 10.5 121 528-679 99-226 (229)
190 PRK14194 bifunctional 5,10-met 48.5 1.3E+02 0.0027 33.7 10.3 63 607-669 138-209 (301)
191 TIGR02244 HAD-IG-Ncltidse HAD 45.6 43 0.00092 38.0 6.2 114 530-646 186-316 (343)
192 TIGR01493 HAD-SF-IA-v2 Haloaci 43.9 25 0.00055 35.0 3.8 86 528-645 90-175 (175)
193 COG1877 OtsB Trehalose-6-phosp 43.1 1.2E+02 0.0026 33.2 9.0 127 524-652 36-228 (266)
194 PF06570 DUF1129: Protein of u 36.6 3.4E+02 0.0074 28.3 11.0 29 746-775 60-88 (206)
195 PF12710 HAD: haloacid dehalog 34.5 18 0.00039 36.4 1.0 13 320-332 1-13 (192)
196 COG0647 NagD Predicted sugar p 33.9 48 0.0011 36.3 4.2 46 520-565 16-61 (269)
197 TIGR00262 trpA tryptophan synt 33.6 6.5E+02 0.014 27.3 13.7 42 525-566 121-164 (256)
198 PRK14169 bifunctional 5,10-met 33.6 3E+02 0.0064 30.5 10.2 43 527-569 11-62 (282)
199 COG1916 Uncharacterized homolo 33.5 2E+02 0.0044 32.8 8.8 104 528-637 96-217 (388)
200 CHL00200 trpA tryptophan synth 33.4 6.7E+02 0.015 27.4 13.3 42 525-566 125-168 (263)
201 PRK14189 bifunctional 5,10-met 33.3 5.1E+02 0.011 28.7 12.0 174 465-669 10-208 (285)
202 TIGR01116 ATPase-IIA1_Ca sarco 32.3 27 0.00059 45.0 2.3 27 199-225 1-27 (917)
203 PRK14179 bifunctional 5,10-met 31.1 6.7E+02 0.014 27.8 12.4 174 465-669 9-208 (284)
204 PF07308 DUF1456: Protein of u 30.7 35 0.00077 29.3 2.0 26 113-138 26-51 (68)
205 PRK13111 trpA tryptophan synth 30.7 7.3E+02 0.016 27.0 13.7 39 527-565 125-165 (258)
206 cd05017 SIS_PGI_PMI_1 The memb 30.7 94 0.002 29.2 5.2 40 526-567 52-91 (119)
207 PRK14182 bifunctional 5,10-met 30.1 3E+02 0.0065 30.4 9.5 43 527-569 11-62 (282)
208 PRK14174 bifunctional 5,10-met 29.7 3.5E+02 0.0075 30.2 10.0 62 607-669 138-213 (295)
209 TIGR02250 FCP1_euk FCP1-like p 29.0 82 0.0018 31.5 4.6 40 528-568 58-97 (156)
210 PRK14172 bifunctional 5,10-met 28.2 3.4E+02 0.0075 29.9 9.6 63 607-669 137-208 (278)
211 PF12689 Acid_PPase: Acid Phos 28.0 99 0.0021 31.5 5.0 41 528-568 45-86 (169)
212 cd04724 Tryptophan_synthase_al 27.8 7.7E+02 0.017 26.3 13.2 37 531-567 116-155 (242)
213 cd00860 ThrRS_anticodon ThrRS 27.6 1.5E+02 0.0033 25.7 5.7 47 522-568 6-53 (91)
214 PRK04302 triosephosphate isome 26.4 6.5E+02 0.014 26.4 11.2 99 529-652 99-202 (223)
215 PRK14184 bifunctional 5,10-met 26.3 4E+02 0.0088 29.5 9.7 62 607-669 136-211 (286)
216 COG1609 PurR Transcriptional r 26.2 4.3E+02 0.0093 29.6 10.4 140 465-636 26-185 (333)
217 TIGR01459 HAD-SF-IIA-hyp4 HAD- 25.9 75 0.0016 33.8 4.0 95 530-648 140-236 (242)
218 PRK14190 bifunctional 5,10-met 25.6 4E+02 0.0086 29.5 9.5 43 527-569 13-64 (284)
219 PF05297 Herpes_LMP1: Herpesvi 25.1 24 0.00052 38.3 0.0 6 750-755 13-18 (381)
220 TIGR02329 propionate_PrpR prop 25.0 6.3E+02 0.014 30.5 11.9 67 603-689 122-189 (526)
221 PRK00652 lpxK tetraacyldisacch 23.9 1.6E+02 0.0035 33.2 6.3 59 616-674 69-154 (325)
222 PRK06552 keto-hydroxyglutarate 23.8 8.7E+02 0.019 25.6 12.0 149 526-684 20-207 (213)
223 PF00389 2-Hacid_dh: D-isomer 23.5 6.4E+02 0.014 23.9 12.8 67 618-693 54-123 (133)
224 cd01017 AdcA Metal binding pro 23.0 1.6E+02 0.0034 32.3 5.9 54 515-568 188-245 (282)
225 PRK14188 bifunctional 5,10-met 22.8 1.1E+03 0.023 26.4 12.3 63 607-669 137-208 (296)
226 PRK14178 bifunctional 5,10-met 22.5 4.8E+02 0.01 28.8 9.4 61 607-669 131-202 (279)
227 cd05014 SIS_Kpsf KpsF-like pro 22.2 99 0.0021 29.0 3.7 29 529-557 59-87 (128)
228 PRK06846 putative deaminase; V 22.0 7.5E+02 0.016 28.5 11.6 131 516-652 158-309 (410)
229 cd00859 HisRS_anticodon HisRS 21.8 2E+02 0.0043 24.5 5.3 47 522-568 6-53 (91)
230 cd01137 PsaA Metal binding pro 21.8 1.7E+02 0.0036 32.3 5.8 54 515-568 194-251 (287)
231 PF03129 HGTP_anticodon: Antic 21.1 2E+02 0.0044 25.4 5.3 49 520-568 2-54 (94)
232 PRK14175 bifunctional 5,10-met 21.0 2.8E+02 0.0061 30.7 7.3 44 526-569 12-64 (286)
233 PRK14170 bifunctional 5,10-met 20.8 3.1E+02 0.0066 30.4 7.5 44 526-569 11-63 (284)
234 PF08645 PNK3P: Polynucleotide 20.4 90 0.0019 31.3 3.1 23 530-552 31-53 (159)
235 PRK15424 propionate catabolism 20.4 9.3E+02 0.02 29.2 12.1 66 603-687 132-197 (538)
236 PRK13670 hypothetical protein; 20.3 7.2E+02 0.016 28.8 10.7 97 518-644 2-112 (388)
237 PF05240 APOBEC_C: APOBEC-like 20.2 1.2E+02 0.0025 25.1 3.0 24 531-554 2-25 (55)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-210 Score=1776.98 Aligned_cols=824 Identities=56% Similarity=0.893 Sum_probs=761.8
Q ss_pred CCCCccCCCCCCCchHHhHHHHHHhhhhcccccccccccchhHHHHHHHHHhhhhhHHHHHHHHHHHHhccccccccccc
Q 043305 29 DEGTFSIPRTKDAPIVRLKRWRQAALVLNASRRFRYTLDLKKEEEKLQTLRKIRAHAQAIRAAVLFKEAGEQANGAEKLI 108 (892)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (892)
.+++|..+ .+|++.++++|||.|..++|++|||||++++++.......+++.|++..+++|+.+|+++....++.
T Consensus 3 ~~~~~~~~-~~n~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~~---- 77 (1034)
T KOG0204|consen 3 LDKDFVVS-MKNSSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEYT---- 77 (1034)
T ss_pred cccccccc-cccchhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhccccccccc----
Confidence 45566555 6899999999999999999999999999999998876677779999999999999999887652211
Q ss_pred cCCCCCcccCHHHHHhhhccCChhHHHHhCCCcccCCCCcccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCC
Q 043305 109 AVPSGDFAIGQEQLSIMTRDHNNNALQQFGRASLASYFPFSSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYP 188 (892)
Q Consensus 109 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~ 188 (892)
-+|++|+|.+|++++|.++|+++|| ++||+++|+||+..||+++++|+.+|++.||+|+||
T Consensus 78 ------~~i~~e~l~~i~~~~~~~~L~~~gG-------------v~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p 138 (1034)
T KOG0204|consen 78 ------LGIGAEELVKIVKEHDLKALNAYGG-------------VEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYP 138 (1034)
T ss_pred ------cccCHHHHHHHhhccchhhhhhccC-------------HHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCC
Confidence 2789999999999999999999999 999999999999999999989999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec----------------------------------------
Q 043305 189 RKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL---------------------------------------- 228 (892)
Q Consensus 189 ~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~---------------------------------------- 228 (892)
++|+|+||+|+|||++|.||+||++||++|+++|+|++|+
T Consensus 139 ~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~ 218 (1034)
T KOG0204|consen 139 EKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKR 218 (1034)
T ss_pred CCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhh
Confidence 9999999999999999999999999999999999997654
Q ss_pred ------------------------------------Cc------------------------------------------
Q 043305 229 ------------------------------------AG------------------------------------------ 230 (892)
Q Consensus 229 ------------------------------------~g------------------------------------------ 230 (892)
||
T Consensus 219 ~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGs 298 (1034)
T KOG0204|consen 219 NIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGS 298 (1034)
T ss_pred ceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCc
Confidence 11
Q ss_pred -------------------------------------------------------EEEEEEeeccccccccceEEeeccc
Q 043305 231 -------------------------------------------------------VRFVRFFTGHTKNAYGTIQFKAGKT 255 (892)
Q Consensus 231 -------------------------------------------------------vl~~~~~~~~~~~~~~~~~~~~~~~ 255 (892)
||.+||+++.+....++ +..
T Consensus 299 gkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-----~~~ 373 (1034)
T KOG0204|consen 299 GKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-----GTT 373 (1034)
T ss_pred ceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-----Ccc
Confidence 22233444433332211 122
Q ss_pred cccchhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEE
Q 043305 256 KVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTV 335 (892)
Q Consensus 256 ~~~~~~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V 335 (892)
...+..+.++++|+++||++|||||||||||||++|||+|+|||+||+|||||+||||||++|+||+|||||||+|+|+|
T Consensus 374 ~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtV 453 (1034)
T KOG0204|consen 374 WSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTV 453 (1034)
T ss_pred ccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEE
Confidence 33445788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcccCCCCCC-CCCCHHHHHHHHHHHHhcCCCccccCCCCC-CccccCChHHHHHHHHHHHcCCChhhhhcccc
Q 043305 336 VEAYVGGRKMNPTDSN-SQLSPMVTSLLVEGIAQNTTGSVYLPPNGG-EAEVSGSPTEKAILQWGMKLGMNFEAVRSECS 413 (892)
Q Consensus 336 ~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~-~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~ 413 (892)
++.|++++.++..... ..+++.+.+++.++|+.|++++++.++.++ +++++|||||+|||.|+.++|++++..|++.+
T Consensus 454 V~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~ 533 (1034)
T KOG0204|consen 454 VQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEK 533 (1034)
T ss_pred EeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhh
Confidence 9999999887743332 469999999999999999999999888765 88999999999999999999999999999999
Q ss_pred eeeeeccccCCceeEEEEecCCCc-EEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEE
Q 043305 414 VLHVFPFNSLKKRGGVAVQLPNSE-VHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIA 492 (892)
Q Consensus 414 i~~~~pF~S~rK~msvvv~~~~~~-~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A 492 (892)
+++++||||.||+|+|+++.++++ | +|||||+|+||++|++|++.+|+.++++++.++.+++.|+.||++||||+|+|
T Consensus 534 v~kv~~FNS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lA 612 (1034)
T KOG0204|consen 534 VVKVYPFNSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLA 612 (1034)
T ss_pred eeEEeccCcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEE
Confidence 999999999999999999988777 6 99999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcC
Q 043305 493 YRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEA 572 (892)
Q Consensus 493 yk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~ 572 (892)
||++..... ++...+.++.++.||+++|++||+||+||||++||+.|++|||+|+|+||||..||+|||.+|||++++.
T Consensus 613 y~df~~~~~-~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~ 691 (1034)
T KOG0204|consen 613 YRDFVAGPD-EEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG 691 (1034)
T ss_pred eeccccCCC-CCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC
Confidence 999875411 1122334567889999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 573 DATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 573 ~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
+ .+++||++||+++++|+++++| +++|+||+||.||+.+|+.|+++||+||+||||+||+||||+||||+|||
T Consensus 692 d---~~~lEG~eFr~~s~ee~~~i~p----kl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMG 764 (1034)
T KOG0204|consen 692 D---FLALEGKEFRELSQEERDKIWP----KLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMG 764 (1034)
T ss_pred c---cceecchhhhhcCHHHHHhhhh----hheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhcc
Confidence 3 6899999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhh
Q 043305 653 IQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMD 732 (892)
Q Consensus 653 i~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d 732 (892)
|+|||+|||+|||||+||||++|+++++|||++|+||+||+|||||+|++|++++|++++..+.+||+++||||||||||
T Consensus 765 IaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMD 844 (1034)
T KOG0204|consen 765 IAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMD 844 (1034)
T ss_pred ccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCcccccccchhHHHHH
Q 043305 733 TLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNS 812 (892)
Q Consensus 733 ~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~~~~~~~~~~~~T~~F~~ 812 (892)
||+|||||||||+++||+|+|++|++|||++.||+||++|++||++++++++|.|..+|+.++.. ...+.+++|++||+
T Consensus 845 TLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~-~~~~~~~nTiIFNt 923 (1034)
T KOG0204|consen 845 TLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPL-HSPPSVHNTIIFNT 923 (1034)
T ss_pred HHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCC-CCchhhheeeehhH
Confidence 99999999999999999999999999999999999999999999999999999999999876543 23567899999999
Q ss_pred HHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 813 FVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 813 fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
|||||+||+||+|++++.|+|+|+++|++|++++.+++++|+++++|+|.+|+|+||+|.||++|+++|+++||++.++
T Consensus 924 FV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~i 1002 (1034)
T KOG0204|consen 924 FVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLL 1002 (1034)
T ss_pred HHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999876
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-138 Score=1184.69 Aligned_cols=732 Identities=33% Similarity=0.519 Sum_probs=618.0
Q ss_pred cccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec-
Q 043305 150 SLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL- 228 (892)
Q Consensus 150 ~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~- 228 (892)
+.+++++++.+.||+++||+.+ |+.+|++.||.|++|..+.+++|+++++||.|+++.||+++|++|++++.+.|+.
T Consensus 6 ~~~v~e~~~~f~t~~~~GLt~~--ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~~e~~v 83 (972)
T KOG0202|consen 6 AKSVSEVLAEFGTDLEEGLTSD--EVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADFDEPFV 83 (972)
T ss_pred cCcHHHHHHHhCcCcccCCCHH--HHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccccee
Confidence 4569999999999999999999 9999999999999999999999999999999999999999999999999988775
Q ss_pred --------------------------------------Cc----------------------------------------
Q 043305 229 --------------------------------------AG---------------------------------------- 230 (892)
Q Consensus 229 --------------------------------------~g---------------------------------------- 230 (892)
+|
T Consensus 84 I~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDe 163 (972)
T KOG0202|consen 84 ITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKSLRIDE 163 (972)
T ss_pred eeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeeeeeeec
Confidence 11
Q ss_pred -------------------------------------EEEEE--Eee---c-------------cccccccceE------
Q 043305 231 -------------------------------------VRFVR--FFT---G-------------HTKNAYGTIQ------ 249 (892)
Q Consensus 231 -------------------------------------vl~~~--~~~---~-------------~~~~~~~~~~------ 249 (892)
|..+| .++ | .+..+.+|+|
T Consensus 164 S~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~ 243 (972)
T KOG0202|consen 164 SSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEF 243 (972)
T ss_pred ccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHH
Confidence 11111 000 0 0111123333
Q ss_pred ---------------Eee--c----cccccchhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeecc
Q 043305 250 ---------------FKA--G----KTKVSDAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRL 308 (892)
Q Consensus 250 ---------------~~~--~----~~~~~~~~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l 308 (892)
|.. + ....+.+++.++++|.+||++.|+|||||||+.+|++||.|++||+|+|++||+|
T Consensus 244 G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkL 323 (972)
T KOG0202|consen 244 GKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKL 323 (972)
T ss_pred HHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcc
Confidence 000 0 1112345577899999999999999999999999999999999999999999999
Q ss_pred ccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccC-------------CCC----------CCCCCCHHHHHHHHHH
Q 043305 309 SACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMN-------------PTD----------SNSQLSPMVTSLLVEG 365 (892)
Q Consensus 309 ~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~-------------~~~----------~~~~~~~~~~~ll~~~ 365 (892)
+++||||.+++||||||||||+|+|+|.++|+.+.... +.. ......+.+.+++..+
T Consensus 324 PsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~ 403 (972)
T KOG0202|consen 324 PSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEIC 403 (972)
T ss_pred cchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHH
Confidence 99999999999999999999999999999998654221 110 0112344566666666
Q ss_pred HHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhh---------------hhcccceeeeeccccCCceeEEE
Q 043305 366 IAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEA---------------VRSECSVLHVFPFNSLKKRGGVA 430 (892)
Q Consensus 366 i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~---------------~r~~~~i~~~~pF~S~rK~msvv 430 (892)
..||++ .+..++. +.++..|.|||.||..++.+.|+.-.. ....++.+..+||+|+||+|+|.
T Consensus 404 ~lCNda-~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~ 481 (972)
T KOG0202|consen 404 ALCNDA-TVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVK 481 (972)
T ss_pred Hhhhhh-hhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEE
Confidence 666654 3433433 677889999999999999999875322 12234566899999999999999
Q ss_pred EecCCC--cEEEEEcCceeeeeccccccccCCC-cccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh-
Q 043305 431 VQLPNS--EVHIHWKGAAEIVLDSCTGYIDTDD-RLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE- 506 (892)
Q Consensus 431 v~~~~~--~~~~~~KGA~e~IL~~C~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~- 506 (892)
+..+.+ ++.+|+|||+|.||++|++++..+| ..+||++..|+.+.+...+|+++||||||+|+++... ..+++.+
T Consensus 482 c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~-~~~~~~~l 560 (972)
T KOG0202|consen 482 CSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPG-QVPDDQDL 560 (972)
T ss_pred EecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcc-cChhhhhh
Confidence 986644 4899999999999999988887776 5599999999999999999999999999999998764 1222211
Q ss_pred --hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh
Q 043305 507 --LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS 584 (892)
Q Consensus 507 --~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~ 584 (892)
...+...|+||+|+|+|||.||||+||++||+.|++|||+|+|+||||..||++||+++||...+.+ -...+++|.+
T Consensus 561 ~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed-~~~~~~TG~e 639 (972)
T KOG0202|consen 561 NDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED-VSSMALTGSE 639 (972)
T ss_pred cccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-ccccccchhh
Confidence 2234568999999999999999999999999999999999999999999999999999999876654 4568999999
Q ss_pred hhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhccc
Q 043305 585 FRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSD 664 (892)
Q Consensus 585 ~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaD 664 (892)
|+.|+++|+++... +..||||++|++|.+||+.||++|++|||||||+|||||||.||||||||++||+|||||||
T Consensus 640 fD~ls~~~~~~~~~----~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 640 FDDLSDEELDDAVR----RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred hhcCCHHHHHHHhh----cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCC
Q 043305 665 IIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPP 744 (892)
Q Consensus 665 iil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p 744 (892)
+||.||||++|+.|++|||.+|+||++|+.|+|+.|+.+++..|+++.+..+.||+|+|+||+|++||.+||.+|+.|||
T Consensus 716 MVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~ 795 (972)
T KOG0202|consen 716 MVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPV 795 (972)
T ss_pred cEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHH---HHHHHHhh-hhcccCC-------------CCc-ccccccch
Q 043305 745 TDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVL---LVLNFQGK-RILNLES-------------DSN-AHSNKVKN 806 (892)
Q Consensus 745 ~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~---~~l~~~g~-~~~~~~~-------------~~~-~~~~~~~~ 806 (892)
++|+|+|||+++++++|+...+.+++..++|..+.. |+.+|.+. ....+.. .+. ........
T Consensus 796 D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~ 875 (972)
T KOG0202|consen 796 DPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPL 875 (972)
T ss_pred ChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccc
Confidence 999999999999999999999888888888875433 22233321 0000000 000 01112356
Q ss_pred hHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHH--HHHhhhccccccCChHHHHHHHHHHHHH
Q 043305 807 TLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI--IQFLGKFASTTRLNWKHWIISVVIGFIR 884 (892)
Q Consensus 807 T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~--v~~~~~~f~~~~L~~~~w~~~i~~~~~~ 884 (892)
||.|..||+...||.+|||+.++.-+..++|+|+||++.+++++++|+++ +++++..|.++||++.+|++.+.+.+-.
T Consensus 876 tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V 955 (972)
T KOG0202|consen 876 TMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPV 955 (972)
T ss_pred eEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhh
Confidence 99999999999999999999887666679999999999999999999654 7899999999999999999999999999
Q ss_pred HHHHhhc
Q 043305 885 LFEHPVL 891 (892)
Q Consensus 885 l~~~eiv 891 (892)
+++.|++
T Consensus 956 ~i~dEil 962 (972)
T KOG0202|consen 956 IIVDEIL 962 (972)
T ss_pred hhHHHHH
Confidence 9999875
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=9e-127 Score=1188.16 Aligned_cols=751 Identities=46% Similarity=0.739 Sum_probs=644.4
Q ss_pred CCCCcccCHHHHHhhhcc-CChhHHHHhCCCcccCCCCcccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCC
Q 043305 111 PSGDFAIGQEQLSIMTRD-HNNNALQQFGRASLASYFPFSSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPR 189 (892)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~-~~~~~~~~~gg~~~~~~~~~~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~ 189 (892)
.+++|++..+|+.++.+. ++.+.|+.||| ++++++.|+||+++||+++++|+++|+++||+|++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~ 80 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGG-------------AEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPE 80 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCC-------------HHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCC
Confidence 357899999999999976 57899999999 9999999999999999955559999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------------cceec----------------------------
Q 043305 190 KKGRSFWMFLWEAWQDLTLIILMIAAAASLALGI-------------KTEYL---------------------------- 228 (892)
Q Consensus 190 ~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~-------------~~eg~---------------------------- 228 (892)
++++++|++++++|+|+++++|++|+++|+++|+ |.+|.
T Consensus 81 ~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~ 160 (941)
T TIGR01517 81 KPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLN 160 (941)
T ss_pred CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999884 23332
Q ss_pred ------------Cc-----------------------------EEEE-E------Eeecccc------------------
Q 043305 229 ------------AG-----------------------------VRFV-R------FFTGHTK------------------ 242 (892)
Q Consensus 229 ------------~g-----------------------------vl~~-~------~~~~~~~------------------ 242 (892)
|| ++-+ . .++|...
T Consensus 161 ~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v 240 (941)
T TIGR01517 161 REKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVV 240 (941)
T ss_pred hccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeE
Confidence 11 1101 0 0000000
Q ss_pred ----------------------------ccccceE---------------------Eeecc----c---ccc-----chh
Q 043305 243 ----------------------------NAYGTIQ---------------------FKAGK----T---KVS-----DAV 261 (892)
Q Consensus 243 ----------------------------~~~~~~~---------------------~~~~~----~---~~~-----~~~ 261 (892)
...++++ |.... . ... ...
T Consensus 241 ~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (941)
T TIGR01517 241 NEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDA 320 (941)
T ss_pred EeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhh
Confidence 0000000 00000 0 000 000
Q ss_pred hhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeC
Q 043305 262 DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVG 341 (892)
Q Consensus 262 ~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~ 341 (892)
..+.+.+..+++++|++||||||+++|+++++++++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++..
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 400 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 400 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEe
Confidence 13455678889999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccc
Q 043305 342 GRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFN 421 (892)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~ 421 (892)
+..++..+.....++...+++..++++|+...... ++.+..+..|||+|.||++++.+.|.+....+.++++++.+||+
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~-~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~ 479 (941)
T TIGR01517 401 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVV-DRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFN 479 (941)
T ss_pred cceEecCcccccCCHHHHHHHHHHHHhCCCCcccc-CCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccC
Confidence 64443222112233455667777888887653211 11234567899999999999999888887777888899999999
Q ss_pred cCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCC
Q 043305 422 SLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERI 501 (892)
Q Consensus 422 S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~ 501 (892)
|++|+|+++++.+++++++++|||||.|+++|+++++.+|+..++++ .++.+++.+++++++|+||+++|||+++.++.
T Consensus 480 s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~ 558 (941)
T TIGR01517 480 SERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEF 558 (941)
T ss_pred CCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCcccc
Confidence 99999999999777779999999999999999988777888888887 78889999999999999999999999875433
Q ss_pred CchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceec
Q 043305 502 PDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIE 581 (892)
Q Consensus 502 ~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~ 581 (892)
+. ++..|+||+|+|+++++||+|||++++|++||++||+|+|+||||+.||.+||++|||.+++ ..+++
T Consensus 559 ~~------~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~-----~~vi~ 627 (941)
T TIGR01517 559 PR------KDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG-----GLAME 627 (941)
T ss_pred cc------ccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC-----ceEee
Confidence 21 22357899999999999999999999999999999999999999999999999999998654 37999
Q ss_pred chhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhh
Q 043305 582 GKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE 661 (892)
Q Consensus 582 G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAke 661 (892)
|+++++++++|++++++ +..||||++|+||.++|+.||++|++|||||||+||+||||+||||||||++|+|+||+
T Consensus 628 G~~~~~l~~~el~~~i~----~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~ 703 (941)
T TIGR01517 628 GKEFRRLVYEEMDPILP----KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKE 703 (941)
T ss_pred HHHhhhCCHHHHHHHhc----cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHH
Confidence 99999999999999999 88999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhccc
Q 043305 662 SSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALAT 741 (892)
Q Consensus 662 aaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~ 741 (892)
+||++|+||||++|+++++|||++|+||+|+++|++++|+..+++.+++.++.++.|++++|+||+|+++|.+|+++|++
T Consensus 704 aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~ 783 (941)
T TIGR01517 704 ASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALAT 783 (941)
T ss_pred hCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCc--ccccccchhHHHHHHHHHHHh
Q 043305 742 EPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSN--AHSNKVKNTLIFNSFVLCQIF 819 (892)
Q Consensus 742 e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~~~~--~~~~~~~~T~~F~~fV~~qvf 819 (892)
|||++++|++||++++++++++.||++++++++|++++.+++++.+..+++..+... .+....++|++|++||++|+|
T Consensus 784 e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~ 863 (941)
T TIGR01517 784 EPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLF 863 (941)
T ss_pred CCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988887777665554332100 112356789999999999999
Q ss_pred hhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 820 NEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 820 n~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
|.+|+|+.++.++|+++++|++|+.++++++++|++++++++.+|++.||++.+|++|++++++.+++.+++
T Consensus 864 ~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~ 935 (941)
T TIGR01517 864 NEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLL 935 (941)
T ss_pred HHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999977568899999999999999999999999999999999999999999999999999999998864
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=3.1e-120 Score=1130.52 Aligned_cols=733 Identities=25% Similarity=0.410 Sum_probs=590.9
Q ss_pred ccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec
Q 043305 149 SSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL 228 (892)
Q Consensus 149 ~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~ 228 (892)
.+++++++++.|+||+++||+++ |+++|+++||+|++++++++|+|++++++|.|+++++|++||++|+++|.|.+|.
T Consensus 8 ~~~~~~~v~~~l~t~~~~GLs~~--ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~~~~~~ 85 (1053)
T TIGR01523 8 FSDIADEAAEFIGTSIPEGLTHD--EAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHDWIEGG 85 (1053)
T ss_pred hhCCHHHHHHHhCcCcccCCCHH--HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 46779999999999998999998 8999999999999999999999999999999999999999999999999888875
Q ss_pred ---------------------------------------Cc--------------EEEE----------E----------
Q 043305 229 ---------------------------------------AG--------------VRFV----------R---------- 235 (892)
Q Consensus 229 ---------------------------------------~g--------------vl~~----------~---------- 235 (892)
|| ++.. |
T Consensus 86 iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VD 165 (1053)
T TIGR01523 86 VISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTD 165 (1053)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCceEEE
Confidence 22 0000 0
Q ss_pred --Eeeccc----cc--------cccce------EEee-----c-------------------------------------
Q 043305 236 --FFTGHT----KN--------AYGTI------QFKA-----G------------------------------------- 253 (892)
Q Consensus 236 --~~~~~~----~~--------~~~~~------~~~~-----~------------------------------------- 253 (892)
.++|.. +. .+.++ -|.+ |
T Consensus 166 ES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~ 245 (1053)
T TIGR01523 166 EALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDP 245 (1053)
T ss_pred chhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccccccccc
Confidence 011100 00 00000 0000 0
Q ss_pred --------------------------cccccch------------------------hhhHHHHHHHHHHHhhhcccCCc
Q 043305 254 --------------------------KTKVSDA------------------------VDGAIKILTVAVTIVVVAVPEGL 283 (892)
Q Consensus 254 --------------------------~~~~~~~------------------------~~~~~~~~~~avtilvvavPegL 283 (892)
.+..... ...+...+..+++++|++|||||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~av~l~Va~VPegL 325 (1053)
T TIGR01523 246 NKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLAISIIPESL 325 (1053)
T ss_pred ccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHcccch
Confidence 0000000 00113455678899999999999
Q ss_pred hhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCc-c---------cCCC-CC--
Q 043305 284 PLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR-K---------MNPT-DS-- 350 (892)
Q Consensus 284 plavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~-~---------~~~~-~~-- 350 (892)
|+++|++|+++++||+|+|++||+++++||||++|+||||||||||+|+|+|+++|+++. . |.+. ..
T Consensus 326 p~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~ 405 (1053)
T TIGR01523 326 IAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVS 405 (1053)
T ss_pred HHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccc
Confidence 999999999999999999999999999999999999999999999999999999998641 1 1110 00
Q ss_pred -------------C--------------C--C-----CCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHH
Q 043305 351 -------------N--------------S--Q-----LSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQ 396 (892)
Q Consensus 351 -------------~--------------~--~-----~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~ 396 (892)
. . . .++...+++..+..||+. .+..+++++.+...|||+|.||++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a-~~~~~~~~~~~~~~GdptE~ALl~ 484 (1053)
T TIGR01523 406 GIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIA-TVFKDDATDCWKAHGDPTEIAIHV 484 (1053)
T ss_pred cccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCC-eeeccCCCCceeeCcCccHHHHHH
Confidence 0 0 0 012234455555555543 332222223456789999999999
Q ss_pred HHHHcCCChh------hh-------------------hcccceeeeeccccCCceeEEEEecCCC-cEEEEEcCceeeee
Q 043305 397 WGMKLGMNFE------AV-------------------RSECSVLHVFPFNSLKKRGGVAVQLPNS-EVHIHWKGAAEIVL 450 (892)
Q Consensus 397 ~a~~~g~~~~------~~-------------------r~~~~i~~~~pF~S~rK~msvvv~~~~~-~~~~~~KGA~e~IL 450 (892)
++.+.|++.. .. +.++++++.+||||+||||+++++.+++ .+++|+|||||.|+
T Consensus 485 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il 564 (1053)
T TIGR01523 485 FAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERII 564 (1053)
T ss_pred HHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHH
Confidence 9999887531 11 2357899999999999999999986544 48899999999999
Q ss_pred ccccccccCCC-cccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh---hhhccCCCCCcEEEEEEEec
Q 043305 451 DSCTGYIDTDD-RLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE---LSRWALPEDDLVLLAIVGIK 526 (892)
Q Consensus 451 ~~C~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~---~~~~~~~e~~l~~lGlvgi~ 526 (892)
++|+++...+| +..+++++.++.+.+.+++|+++|+||||+|||+++.++...... ....+..|+||+|+|+++++
T Consensus 565 ~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~ 644 (1053)
T TIGR01523 565 ECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIY 644 (1053)
T ss_pred HhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeee
Confidence 99998766555 578999999999999999999999999999999987532211000 00123468999999999999
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-----CCCCceecchhhhhcCHHHHHHHhcccc
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-----ATEPNIIEGKSFRALSETQREEIAGEDF 601 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-----~~~~~vi~G~~~~~l~~~e~~~i~~~~~ 601 (892)
||+|+|++++|++||+|||+|+|+||||+.||.+||++|||.+++.. .....+++|++++.++++++++++.
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~--- 721 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKA--- 721 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhh---
Confidence 99999999999999999999999999999999999999999864211 1134799999999999999999988
Q ss_pred cceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 602 GMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 602 ~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
+..||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||++|+++||++||++++||||++|+++++|
T Consensus 722 -~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~ 800 (1053)
T TIGR01523 722 -LCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEE 800 (1053)
T ss_pred -cCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCC
Q 043305 682 GRSVYANIQKFIQFQLTVNVAALVINFVAAVSS---G--DVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGR 756 (892)
Q Consensus 682 GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~---~--~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r 756 (892)
||++|+||+|+++|+|+.|+..+++.+++.+++ + +.||+++|+||+|+++|.+|+++|++|||++++|+|||+.+
T Consensus 801 gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~ 880 (1053)
T TIGR01523 801 GRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDN 880 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCC
Confidence 999999999999999999999999999988874 2 47999999999999999999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--cCCCC------cc-cccccchhHHHHHHHHHHHhhhhcccCC
Q 043305 757 REPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILN--LESDS------NA-HSNKVKNTLIFNSFVLCQIFNEFNARKP 827 (892)
Q Consensus 757 ~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~--~~~~~------~~-~~~~~~~T~~F~~fV~~qvfn~~n~R~~ 827 (892)
+++++++.+|+.++.+++++.++.+..++...+.+. ..+.. .. .....++|+.|.+++++|++|.+|||+.
T Consensus 881 ~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~ 960 (1053)
T TIGR01523 881 EVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDF 960 (1053)
T ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999987766554432111110 00000 00 0134578999999999999999999986
Q ss_pred CCccccc----------------CCcchHHHHHHHHHHHHHHHHH--HHHhhh-ccccccCChHHHHHHHHHHHHHHHHH
Q 043305 828 DEKNIFG----------------GITKNRLFMGIVAVTLVLQILI--IQFLGK-FASTTRLNWKHWIISVVIGFIRLFEH 888 (892)
Q Consensus 828 ~~~~~f~----------------~~~~N~~f~~~i~~~~~~qi~~--v~~~~~-~f~~~~L~~~~w~~~i~~~~~~l~~~ 888 (892)
+. ++|+ +.++|+++++.+++++++|+++ +|+++. +|+++||++ +|+++++++++.+++.
T Consensus 961 ~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~ 1038 (1053)
T TIGR01523 961 DN-SFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGA 1038 (1053)
T ss_pred ch-hhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHH
Confidence 53 3332 4689999999888888888654 678885 999999997 8999999999999888
Q ss_pred hh
Q 043305 889 PV 890 (892)
Q Consensus 889 ei 890 (892)
|+
T Consensus 1039 e~ 1040 (1053)
T TIGR01523 1039 EI 1040 (1053)
T ss_pred HH
Confidence 76
No 5
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.3e-117 Score=1109.09 Aligned_cols=735 Identities=26% Similarity=0.362 Sum_probs=588.1
Q ss_pred ccccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc------
Q 043305 149 SSLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALG------ 222 (892)
Q Consensus 149 ~~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg------ 222 (892)
.+.+.+++.+.|+||+++||+++ |+++|+++||+|++++++++++|++++++|.|++.++|++||++|+++.
T Consensus 18 ~~~~~~~~~~~l~t~~~~GLs~~--e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~ 95 (997)
T TIGR01106 18 HKLSLDELERKYGTDLSKGLSAA--RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAST 95 (997)
T ss_pred hhCCHHHHHHHhCcCcccCCCHH--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 45569999999999999999998 8999999999999999999999999999999999999999999988762
Q ss_pred -------ccceec---------------------------------------Cc--------------------------
Q 043305 223 -------IKTEYL---------------------------------------AG-------------------------- 230 (892)
Q Consensus 223 -------~~~eg~---------------------------------------~g-------------------------- 230 (892)
.+.+|+ ||
T Consensus 96 ~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 96 EEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 222332 22
Q ss_pred --E-EEEE-------Eeecccc----ccc----cc-----eEEee---------------c-c-----------------
Q 043305 231 --V-RFVR-------FFTGHTK----NAY----GT-----IQFKA---------------G-K----------------- 254 (892)
Q Consensus 231 --v-l~~~-------~~~~~~~----~~~----~~-----~~~~~---------------~-~----------------- 254 (892)
+ +.+. .++|... ... .+ .-|.+ | .
T Consensus 176 D~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 255 (997)
T TIGR01106 176 DLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGK 255 (997)
T ss_pred eEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCC
Confidence 0 1000 0111100 000 00 00000 0 0
Q ss_pred ccccch--------------------------hhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeecc
Q 043305 255 TKVSDA--------------------------VDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRL 308 (892)
Q Consensus 255 ~~~~~~--------------------------~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l 308 (892)
...... ...+.+.+..+++++|++||||||+++|+++++++++|+++|++||++
T Consensus 256 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~ 335 (997)
T TIGR01106 256 TPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNL 335 (997)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCc
Confidence 000000 012345666788899999999999999999999999999999999999
Q ss_pred ccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCC------CCCCCHHHHHHHHHHHHhcCCCccccCCCCC-
Q 043305 309 SACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS------NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGG- 381 (892)
Q Consensus 309 ~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~------~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~- 381 (892)
+++|+||++++||||||||||+|+|+|+++|+++..+..... .........+.+...+++|+++... ++.++
T Consensus 336 ~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~-~~~~~~ 414 (997)
T TIGR01106 336 EAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFK-AGQENV 414 (997)
T ss_pred HHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeec-cccCCC
Confidence 999999999999999999999999999999987765432110 0011112232333444444444321 11111
Q ss_pred ---CccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecC---CCcEEEEEcCceeeeeccccc
Q 043305 382 ---EAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLP---NSEVHIHWKGAAEIVLDSCTG 455 (892)
Q Consensus 382 ---~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~---~~~~~~~~KGA~e~IL~~C~~ 455 (892)
+....|||+|.||++++.+.+.+....+.++++++.+||||+||||+++++.. ++.+++|+|||||.|+++|++
T Consensus 415 ~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~ 494 (997)
T TIGR01106 415 PILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSS 494 (997)
T ss_pred cccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhH
Confidence 24568999999999999987777777888999999999999999999988643 246889999999999999998
Q ss_pred cccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh--hhhccCCCCCcEEEEEEEecCCCchhH
Q 043305 456 YIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE--LSRWALPEDDLVLLAIVGIKDPCRPSV 533 (892)
Q Consensus 456 ~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~--~~~~~~~e~~l~~lGlvgi~DplR~~v 533 (892)
++ .+|+.++++++.++.+.+.+++|+++|+||+|+|||+++.++.+.... .+..+..|+||+|+|+++++||+|+|+
T Consensus 495 ~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v 573 (997)
T TIGR01106 495 IL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAV 573 (997)
T ss_pred Hh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHH
Confidence 76 578889999999999999999999999999999999987543321100 011123488999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-------------------CCCCceecchhhhhcCHHHHH
Q 043305 534 KDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-------------------ATEPNIIEGKSFRALSETQRE 594 (892)
Q Consensus 534 ~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-------------------~~~~~vi~G~~~~~l~~~e~~ 594 (892)
+++|++|+++||+|+|+|||++.||.++|+++||.+++.+ .....+++|++++.++++|++
T Consensus 574 ~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~ 653 (997)
T TIGR01106 574 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLD 653 (997)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHH
Confidence 9999999999999999999999999999999999865321 012379999999999999999
Q ss_pred HHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchH
Q 043305 595 EIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFAS 674 (892)
Q Consensus 595 ~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~s 674 (892)
+++++. +..||||++|+||.++|+.||++|++|||||||+||+||||+||||||||++|+|+||++||++|+||||++
T Consensus 654 ~~~~~~--~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 654 EILKYH--TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHhc--CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 998821 225999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCC
Q 043305 675 VVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPV 754 (892)
Q Consensus 675 Iv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~ 754 (892)
|+++++|||++|+||+|+++|+++.|+..+++.++++++..++||+++|+||+|++||++|+++|++|||++++|+|||+
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCccHHHHHHH-HHHHHHHHHHHHHHHHHhhh--------hcccCC--C-----C---cc-----c-----cccc
Q 043305 755 GR-REPLITNIMWRNL-LIQASYQVSVLLVLNFQGKR--------ILNLES--D-----S---NA-----H-----SNKV 804 (892)
Q Consensus 755 ~r-~~~li~~~m~~~i-~~~ai~q~~v~~~l~~~g~~--------~~~~~~--~-----~---~~-----~-----~~~~ 804 (892)
++ .++++++.||..+ +..++++.++.++.++.... .+++.. . + .. . ....
T Consensus 812 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (997)
T TIGR01106 812 NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFT 891 (997)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhh
Confidence 85 7899999887664 44466666554444332211 111100 0 0 00 0 0014
Q ss_pred chhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHH--HHHhhhccccccCChHHHHHHHHHHH
Q 043305 805 KNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI--IQFLGKFASTTRLNWKHWIISVVIGF 882 (892)
Q Consensus 805 ~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~--v~~~~~~f~~~~L~~~~w~~~i~~~~ 882 (892)
++|++|++|+++|+||.+|||+. +.++|++.++|++++.++++.+++++++ +|+++.+|++.||++.+|++|+++++
T Consensus 892 ~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 970 (997)
T TIGR01106 892 CHTAFFVSIVVVQWADLIICKTR-RNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSL 970 (997)
T ss_pred hhHHHHHHHHHHHHHHHHHhccC-cccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence 68999999999999999999995 5578865589999998888888887554 56789999999999999999999999
Q ss_pred HHHHHHhh
Q 043305 883 IRLFEHPV 890 (892)
Q Consensus 883 ~~l~~~ei 890 (892)
+.+++.++
T Consensus 971 ~~~~~~~~ 978 (997)
T TIGR01106 971 LIFVYDEI 978 (997)
T ss_pred HHHHHHHH
Confidence 99998876
No 6
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=4.2e-117 Score=1095.29 Aligned_cols=699 Identities=32% Similarity=0.514 Sum_probs=594.7
Q ss_pred ccccHHHHHHHhcCCCCCCCC-CChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHH-HHHHHHHHHHHHHHHhhccccce
Q 043305 149 SSLQVKGLSDMLKTNLEKGIP-GDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAW-QDLTLIILMIAAAASLALGIKTE 226 (892)
Q Consensus 149 ~~~~~~gl~~~L~t~~~~GL~-~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~-~D~~liIL~vaAvvSl~lg~~~e 226 (892)
..++++++++.|+||+++||+ ++ |+++|+++||+|++++++++|+|++++++| +|++.++|++||++|+++|.|.|
T Consensus 5 ~~~~~~~v~~~l~t~~~~GLs~~~--ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~~~~ 82 (884)
T TIGR01522 5 CELSVEETCSKLQTDLQNGLNSSQ--EASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNIDD 82 (884)
T ss_pred hhCCHHHHHHHhCcCcccCCCcHH--HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcchhh
Confidence 456799999999999999999 55 899999999999999999999999999999 99999999999999999999988
Q ss_pred ec---------------------------------------Cc-----------------------------EEEEE---
Q 043305 227 YL---------------------------------------AG-----------------------------VRFVR--- 235 (892)
Q Consensus 227 g~---------------------------------------~g-----------------------------vl~~~--- 235 (892)
|. || ++-+.
T Consensus 83 ~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~ 162 (884)
T TIGR01522 83 AVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLS 162 (884)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCceE
Confidence 75 12 11110
Q ss_pred ----Eeeccc----ccccc-------------ceEEee---------------c------------------cccccch-
Q 043305 236 ----FFTGHT----KNAYG-------------TIQFKA---------------G------------------KTKVSDA- 260 (892)
Q Consensus 236 ----~~~~~~----~~~~~-------------~~~~~~---------------~------------------~~~~~~~- 260 (892)
.++|.. +.... +.-|.+ | .+.....
T Consensus 163 VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l 242 (884)
T TIGR01522 163 IDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSM 242 (884)
T ss_pred EEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHH
Confidence 011100 00000 000000 0 0000000
Q ss_pred -----------------------h--hhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccC
Q 043305 261 -----------------------V--DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMG 315 (892)
Q Consensus 261 -----------------------~--~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG 315 (892)
+ ..+.+.+.++++++|++||||||+++|++++++++||+|+|++||+++++|+||
T Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg 322 (884)
T TIGR01522 243 DLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLG 322 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhcc
Confidence 0 124567778899999999999999999999999999999999999999999999
Q ss_pred ceeEEEeCCCCCcccCceEEEEEEeCCcccC--------CCCC--------CCCCCHHHHHHHHHHHHhcCCCccccCCC
Q 043305 316 SATTICSDKTGTLTLNQMTVVEAYVGGRKMN--------PTDS--------NSQLSPMVTSLLVEGIAQNTTGSVYLPPN 379 (892)
Q Consensus 316 ~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~--------~~~~--------~~~~~~~~~~ll~~~i~~n~~~~~~~~~~ 379 (892)
++|+||||||||||+|+|+|+++|..+.... +.+. ....++...+++..+..||+.. . ..+
T Consensus 323 ~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~-~~~- 399 (884)
T TIGR01522 323 SVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAK-F-RNE- 399 (884)
T ss_pred CccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCe-e-cCC-
Confidence 9999999999999999999999997653211 0000 0011234445555555555542 1 111
Q ss_pred CCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecC-CCcEEEEEcCceeeeecccccccc
Q 043305 380 GGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLP-NSEVHIHWKGAAEIVLDSCTGYID 458 (892)
Q Consensus 380 ~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~-~~~~~~~~KGA~e~IL~~C~~~~~ 458 (892)
.....|||+|+||++++.+.|++ ..+..++.++.+||+|+||||+++++.. ++++++++|||||.|+.+|++++.
T Consensus 400 --~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~ 475 (884)
T TIGR01522 400 --ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQK 475 (884)
T ss_pred --CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhh
Confidence 12456999999999999988753 4456788999999999999999998753 567899999999999999999988
Q ss_pred CCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHH
Q 043305 459 TDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIR 538 (892)
Q Consensus 459 ~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~ 538 (892)
.+|...+++++.++.+.+.+++++++|+||+++|||+++ ++|+|+|+++++||+|||++++|+
T Consensus 476 ~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~-----------------~~l~~lGli~l~Dp~r~~~~~~i~ 538 (884)
T TIGR01522 476 KDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK-----------------GQLTFLGLVGINDPPRPGVKEAVT 538 (884)
T ss_pred cCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC-----------------CCeEEEEEEeccCcchhHHHHHHH
Confidence 788888999999999999999999999999999998652 479999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHH
Q 043305 539 LCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLL 618 (892)
Q Consensus 539 ~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~l 618 (892)
+||++||+++|+|||+..||.+||++|||..... .+++|++++++++++++++++ +..||||++|+||..+
T Consensus 539 ~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~-----~~v~g~~l~~~~~~~l~~~~~----~~~Vfar~~P~~K~~i 609 (884)
T TIGR01522 539 TLITGGVRIIMITGDSQETAVSIARRLGMPSKTS-----QSVSGEKLDAMDDQQLSQIVP----KVAVFARASPEHKMKI 609 (884)
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC-----ceeEhHHhHhCCHHHHHHHhh----cCeEEEECCHHHHHHH
Confidence 9999999999999999999999999999986432 578999999999999999999 8999999999999999
Q ss_pred HHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 619 VQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 698 (892)
Q Consensus 619 V~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt 698 (892)
|+.||++|++|+|||||+||+||||+||||||||.+|+++||++||++++||||++|+++++|||++|+||+|+++|+++
T Consensus 610 v~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~ 689 (884)
T TIGR01522 610 VKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLS 689 (884)
T ss_pred HHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHH
Q 043305 699 VNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVS 778 (892)
Q Consensus 699 ~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~ 778 (892)
.|+..+++.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|+|||++++++++++.||++++++++++++
T Consensus 690 ~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~ 769 (884)
T TIGR01522 690 TSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVV 769 (884)
T ss_pred hhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHhhhhcccCCCCcccccccchhHHHHHHHHHHHhhhhcccCCCCccccc-CCcchHHHHHHHHHHHHHHHHHH
Q 043305 779 VLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIVAVTLVLQILII 857 (892)
Q Consensus 779 v~~~l~~~g~~~~~~~~~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~-~~~~N~~f~~~i~~~~~~qi~~v 857 (892)
+.+++++... .. + .....++|++|++||++|+||.||||+. +.++|+ ++++|++|++++++++++|++++
T Consensus 770 ~~~~~~~~~~--~~--~----~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 840 (884)
T TIGR01522 770 GTLFVFVREM--QD--G----VITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIGFFSNRMFNYAVGGSIIGQLLVI 840 (884)
T ss_pred HHHHHHHHHH--cC--C----cchhhHHHHHHHHHHHHHHHHHHHHccC-CccccccCcccCHHHHHHHHHHHHHHHHHH
Confidence 7665544321 11 1 1124578999999999999999999995 567886 88999999999999999998775
Q ss_pred --HHhhhccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 858 --QFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 858 --~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
|+++.+|++.||++.+|++|++++++.+++.|+.
T Consensus 841 ~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~ 876 (884)
T TIGR01522 841 YFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIR 876 (884)
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999998863
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-116 Score=1084.94 Aligned_cols=704 Identities=36% Similarity=0.555 Sum_probs=587.5
Q ss_pred HHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccc----ceec--
Q 043305 155 GLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIK----TEYL-- 228 (892)
Q Consensus 155 gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~----~eg~-- 228 (892)
.+...+.++...||+.+ ++.+|++.||.|++++.+..++|..++.+|.|++.++|++++++|..+|.+ .+.+
T Consensus 32 ~~~~~~~~~~~~GLs~~--e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~~~I 109 (917)
T COG0474 32 ELLLELFTSPTTGLSEE--EVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVI 109 (917)
T ss_pred hHHHhhcCCcccCCCHH--HHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcceeee
Confidence 88889999999999996 899999999999999999999999999999999999999999999999998 3433
Q ss_pred -------------------------------------Cc-----------------------------EEEEE-------
Q 043305 229 -------------------------------------AG-----------------------------VRFVR------- 235 (892)
Q Consensus 229 -------------------------------------~g-----------------------------vl~~~------- 235 (892)
|| ++...
T Consensus 110 ~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs 189 (917)
T COG0474 110 LLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDES 189 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCceEEcc
Confidence 12 00000
Q ss_pred Eeeccc----c-------------------------------------------------------ccccceEEeecccc
Q 043305 236 FFTGHT----K-------------------------------------------------------NAYGTIQFKAGKTK 256 (892)
Q Consensus 236 ~~~~~~----~-------------------------------------------------------~~~~~~~~~~~~~~ 256 (892)
.++|.+ + ...++++.......
T Consensus 190 ~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~ 269 (917)
T COG0474 190 ALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLG 269 (917)
T ss_pred cccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHH
Confidence 011100 0 00000000000000
Q ss_pred -----------ccchh------h-hHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCcee
Q 043305 257 -----------VSDAV------D-GAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSAT 318 (892)
Q Consensus 257 -----------~~~~~------~-~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt 318 (892)
.-.++ . ++.+.|..+++++|++||||||+.+|+++++++++|+|++++||+++++|+||+++
T Consensus 270 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~ 349 (917)
T COG0474 270 KFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVD 349 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCcc
Confidence 00000 1 15788999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCcccCceEEEEEEeCC-c-ccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHH
Q 043305 319 TICSDKTGTLTLNQMTVVEAYVGG-R-KMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQ 396 (892)
Q Consensus 319 ~IcsDKTGTLT~n~M~V~~~~~~~-~-~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~ 396 (892)
+||||||||||+|+|+|++++..+ . ..+ +.....++...+++..+..|| +... ..+ + ++..|||||.||++
T Consensus 350 vICsDKTGTLTqN~M~v~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~lc~-~~~~--~~~-~-~~~~gdptE~Al~~ 422 (917)
T COG0474 350 VICSDKTGTLTQNKMTVKKIYINGGGKDID--DKDLKDSPALLRFLLAAALCN-SVTP--EKN-G-WYQAGDPTEGALVE 422 (917)
T ss_pred EEEecCCCCCccCeEEEEEEEeCCCccccc--ccccccchHHHHHHHHHHhcC-cccc--ccc-C-ceecCCccHHHHHH
Confidence 999999999999999999999984 2 111 111122233334444444444 3322 112 2 77899999999999
Q ss_pred HHHHcCC--ChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHH
Q 043305 397 WGMKLGM--NFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTF 474 (892)
Q Consensus 397 ~a~~~g~--~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~ 474 (892)
++.+.|. +....+.++++++.+||||+|||||++++.+++++.+++|||||.|+++|+++ |+..+++++.++.+
T Consensus 423 ~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~ 498 (917)
T COG0474 423 FAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTL 498 (917)
T ss_pred HHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHH
Confidence 9999998 88888888999999999999999999999777779999999999999999987 77889999999999
Q ss_pred HHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCC
Q 043305 475 KKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDN 554 (892)
Q Consensus 475 ~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn 554 (892)
++..++|+++|||++++|||..+..+.... . +..|+||+|+|++||+||||+|++++|+.|++|||+|||+||||
T Consensus 499 ~~~~~~la~~glRvla~A~k~~~~~~~~~~----~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~ 573 (917)
T COG0474 499 EEAVKELASEGLRVLAVAYKKLDRAEKDDE----V-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDH 573 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcccccch----h-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCC
Confidence 999999999999999999997764332211 1 45789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCC
Q 043305 555 IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGD 634 (892)
Q Consensus 555 ~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGD 634 (892)
+.||++||++|||..+... ..+++|.+++.++++|+.+.++ +..||||+||+||.++|+.||++|++||||||
T Consensus 574 ~~TA~aIa~~~Gi~~~~~~---~~vi~G~el~~l~~~el~~~~~----~~~VfARvsP~qK~~IV~~lq~~g~vVamtGD 646 (917)
T COG0474 574 VETAIAIAKECGIEAEAES---ALVIDGAELDALSDEELAELVE----ELSVFARVSPEQKARIVEALQKSGHVVAMTGD 646 (917)
T ss_pred HHHHHHHHHHcCCCCCCCc---eeEeehHHhhhcCHHHHHHHhh----hCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999999999865421 4699999999999999999999 78899999999999999999999999999999
Q ss_pred CCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043305 635 GTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSS 714 (892)
Q Consensus 635 G~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~ 714 (892)
|+||+||||+||||||||+.|||+||++||+++.||||.+|+.+++|||++|.||+|+++|.++.|+..+++.+++.++.
T Consensus 647 GvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~ 726 (917)
T COG0474 647 GVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFN 726 (917)
T ss_pred CchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CC-CchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 043305 715 GD-VPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNL 793 (892)
Q Consensus 715 ~~-~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~ 793 (892)
.+ .||+++|+||+|+++|++|+++|+.++|+.++|++||+++.++++++..+..++++..++.+++.++.|........
T Consensus 727 ~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~ 806 (917)
T COG0474 727 LFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI 806 (917)
T ss_pred cccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77 99999999999999999999999999999999999999999999999988887777777777666655544333221
Q ss_pred CCCCccc-ccccchhHHHHHHHHHHHhhhhcccCCCCccccc-CCcchHHHHHHHHHHHHHHHHHH--HHhh-hcccccc
Q 043305 794 ESDSNAH-SNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIVAVTLVLQILII--QFLG-KFASTTR 868 (892)
Q Consensus 794 ~~~~~~~-~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~-~~~~N~~f~~~i~~~~~~qi~~v--~~~~-~~f~~~~ 868 (892)
....... .....+|+.|++++++|.++.+++|... .++|+ +++.|+.++++++++++++++++ ++.. ..|.+.|
T Consensus 807 ~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~ 885 (917)
T COG0474 807 ANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRG-RPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTP 885 (917)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCC
Confidence 1110011 1456789999999999999999999864 34554 46899999999998888887765 4555 6899999
Q ss_pred CChHHHHHHHHHHHHH
Q 043305 869 LNWKHWIISVVIGFIR 884 (892)
Q Consensus 869 L~~~~w~~~i~~~~~~ 884 (892)
+++.+|++++++....
T Consensus 886 ~~~~~~~~~~~~~~~~ 901 (917)
T COG0474 886 LSLFEWLIAIAVALLL 901 (917)
T ss_pred CcHHHHHHHHHHHHHH
Confidence 9999999998887444
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.2e-111 Score=1042.64 Aligned_cols=681 Identities=22% Similarity=0.295 Sum_probs=550.3
Q ss_pred ccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----
Q 043305 151 LQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKT----- 225 (892)
Q Consensus 151 ~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~----- 225 (892)
++.+++.+.|+||. +||+++ |+++|+++||+|++|+++++++|++++++|+|+++++|++||++|+++|.+.
T Consensus 30 ~~~~~v~~~l~~~~-~GLs~~--ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 30 NSLEETLANLNTHR-QGLTEE--DAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred CCHHHHHHHhCCCC-CCCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 34899999999995 699998 8999999999999999999999999999999999999999999999997542
Q ss_pred ------eec---------------------------------------C------c------------------------
Q 043305 226 ------EYL---------------------------------------A------G------------------------ 230 (892)
Q Consensus 226 ------eg~---------------------------------------~------g------------------------ 230 (892)
+++ | |
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 222 3 3
Q ss_pred -----EEEEE-------Eeeccc----ccc---------------c-------cceEEee---------------c-c--
Q 043305 231 -----VRFVR-------FFTGHT----KNA---------------Y-------GTIQFKA---------------G-K-- 254 (892)
Q Consensus 231 -----vl~~~-------~~~~~~----~~~---------------~-------~~~~~~~---------------~-~-- 254 (892)
++-+. .++|.. +.. + +..-|.+ | .
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 00000 011100 000 0 0000000 0 0
Q ss_pred ----------ccccch------------------------------hhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHH
Q 043305 255 ----------TKVSDA------------------------------VDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYS 294 (892)
Q Consensus 255 ----------~~~~~~------------------------------~~~~~~~~~~avtilvvavPegLplavtl~la~~ 294 (892)
...... ..++.+.+.++++++|++||||||+++|++++.|
T Consensus 267 ~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g 346 (903)
T PRK15122 267 FGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKG 346 (903)
T ss_pred hhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 000000 0124567788999999999999999999999999
Q ss_pred HHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCcc
Q 043305 295 MRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSV 374 (892)
Q Consensus 295 ~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~ 374 (892)
+++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++..+.. .+++ ++..+ +.|+..
T Consensus 347 ~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~---------~~~~---~l~~a-~l~s~~-- 411 (903)
T PRK15122 347 AIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR---------KDER---VLQLA-WLNSFH-- 411 (903)
T ss_pred HHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC---------ChHH---HHHHH-HHhCCC--
Confidence 99999999999999999999999999999999999999999998742210 0122 22222 223211
Q ss_pred ccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeecccc
Q 043305 375 YLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCT 454 (892)
Q Consensus 375 ~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~ 454 (892)
+ ...|||+|.||++++.+.+.+ ..+.+++.++.+||+|.+|+|+++++..++++++++|||||.|+++|+
T Consensus 412 ---~-----~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~ 481 (903)
T PRK15122 412 ---Q-----SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVAT 481 (903)
T ss_pred ---C-----CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhch
Confidence 1 126899999999999887643 234567889999999999999999987677889999999999999999
Q ss_pred ccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHH
Q 043305 455 GYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVK 534 (892)
Q Consensus 455 ~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~ 534 (892)
++. .+|+..+++++.++++.+.+++++++|+|++++|||+++.++... ...+..|+|++|+|+++++||+|||++
T Consensus 482 ~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~----~~~~~~e~~l~~lGli~l~Dp~R~~a~ 556 (903)
T PRK15122 482 HVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRA----QYSTADERDLVIRGFLTFLDPPKESAA 556 (903)
T ss_pred hhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccc----ccccccccCcEEEEEEeccCccHHHHH
Confidence 875 467788999999999999999999999999999999886432110 011235789999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
++|++||++||+|+|+||||+.||.+||++|||.. ..+++|+++++++++|+.+.++ +..||||++|+|
T Consensus 557 ~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-------~~vi~G~el~~~~~~el~~~v~----~~~VfAr~sPe~ 625 (903)
T PRK15122 557 PAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-------GEPLLGTEIEAMDDAALAREVE----ERTVFAKLTPLQ 625 (903)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-------CCccchHhhhhCCHHHHHHHhh----hCCEEEEeCHHH
Confidence 99999999999999999999999999999999952 2589999999999999999999 889999999999
Q ss_pred HHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHH
Q 043305 615 KLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQ 694 (892)
Q Consensus 615 K~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~ 694 (892)
|.++|+.||++|++|||||||+||+||||+|||||||| +|||+||++||+||+||||++|+++++|||++|+||+||++
T Consensus 626 K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~ 704 (903)
T PRK15122 626 KSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLN 704 (903)
T ss_pred HHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHH
Q 043305 695 FQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQAS 774 (892)
Q Consensus 695 f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai 774 (892)
|+++.|+..++..+++.++..+.|++|+|+||+|++||+ |+++|++|||++++| |||++++++++++.|+...+..++
T Consensus 705 ~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~ 782 (903)
T PRK15122 705 MTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSI 782 (903)
T ss_pred HHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHH
Confidence 999999999988888877777799999999999999995 999999999999999 999999999999988754333333
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCcccccccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHH
Q 043305 775 YQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQI 854 (892)
Q Consensus 775 ~q~~v~~~l~~~g~~~~~~~~~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi 854 (892)
+.++.+++ .++ .+.. +. .......+|..|.+++++|+||.||+|+.+. ++ |+|++.+..+++++++|+
T Consensus 783 ~~~~~~~~-~~~---~~~~-~~--~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~~-~~----~~~~~~~~~~~~~~~~~~ 850 (903)
T PRK15122 783 FDITTFAL-MWF---VFAA-NS--VEMQALFQSGWFIEGLLSQTLVVHMLRTQKI-PF----IQSTAALPVLLTTGLIMA 850 (903)
T ss_pred HHHHHHHH-HHH---Hhcc-Cc--HhhhhhhHHHHHHHHHHHHHHHHHhhCcCCC-Cc----CcchHHHHHHHHHHHHHH
Confidence 33322222 221 1111 10 0001134688899999999999999998632 33 456655555556666665
Q ss_pred H--HHHH--hhhccccccCChHHHHHHHHHHHHHHHHHhh
Q 043305 855 L--IIQF--LGKFASTTRLNWKHWIISVVIGFIRLFEHPV 890 (892)
Q Consensus 855 ~--~v~~--~~~~f~~~~L~~~~w~~~i~~~~~~l~~~ei 890 (892)
+ ++++ ++.+|+++||++.+|+++++++++.+++.|+
T Consensus 851 ~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~ 890 (903)
T PRK15122 851 IGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQG 890 (903)
T ss_pred HHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4 4565 7999999999999999999999988888765
No 9
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.2e-109 Score=1023.70 Aligned_cols=672 Identities=23% Similarity=0.328 Sum_probs=537.0
Q ss_pred ccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec--
Q 043305 151 LQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL-- 228 (892)
Q Consensus 151 ~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~-- 228 (892)
++.+++.+.|+|+.+ ||+++ |+++|+++||+|++|+++++++|+++|++|.|++.++|++||++|+++|.+.++.
T Consensus 52 ~~~~~v~~~l~~~~~-GLs~~--ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~~~~a~~I 128 (902)
T PRK10517 52 MPEEELWKTFDTHPE-GLNEA--EVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATEDLFAAGVI 128 (902)
T ss_pred CCHHHHHHHhCCCCC-CCCHH--HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 458999999999984 99988 8999999999999999999999999999999999999999999999999876664
Q ss_pred -------------------------------------C------c-----------------------------EEEEE-
Q 043305 229 -------------------------------------A------G-----------------------------VRFVR- 235 (892)
Q Consensus 229 -------------------------------------~------g-----------------------------vl~~~- 235 (892)
| | ++-+.
T Consensus 129 ~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~ 208 (902)
T PRK10517 129 ALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD 208 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc
Confidence 3 4 00010
Q ss_pred ------Eeecccc---ccccc-------------eEEee---------------------------------ccccccch
Q 043305 236 ------FFTGHTK---NAYGT-------------IQFKA---------------------------------GKTKVSDA 260 (892)
Q Consensus 236 ------~~~~~~~---~~~~~-------------~~~~~---------------------------------~~~~~~~~ 260 (892)
.++|... ...+. .-|.+ ........
T Consensus 209 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~ 288 (902)
T PRK10517 209 LFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQG 288 (902)
T ss_pred eEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHH
Confidence 0111000 00000 00000 00000000
Q ss_pred --------------------------hhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeecccccccc
Q 043305 261 --------------------------VDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETM 314 (892)
Q Consensus 261 --------------------------~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~Etl 314 (892)
...+.+.+.++++++|++||||||+++|+++++|+++|+|+|++||+++++|+|
T Consensus 289 ~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~l 368 (902)
T PRK10517 289 ISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNF 368 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhc
Confidence 012456778899999999999999999999999999999999999999999999
Q ss_pred CceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHH
Q 043305 315 GSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAI 394 (892)
Q Consensus 315 G~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~AL 394 (892)
|++|+||||||||||+|+|+|.+++... . .++ .+++. ..+.|+.. . ...|||+|.|+
T Consensus 369 g~v~vic~DKTGTLT~n~m~V~~~~~~~------~----~~~--~~ll~-~a~l~~~~----~------~~~~~p~d~Al 425 (902)
T PRK10517 369 GAMDILCTDKTGTLTQDKIVLENHTDIS------G----KTS--ERVLH-SAWLNSHY----Q------TGLKNLLDTAV 425 (902)
T ss_pred cCCCEEEecCCCccccceEEEEEEecCC------C----CCH--HHHHH-HHHhcCCc----C------CCCCCHHHHHH
Confidence 9999999999999999999999864210 0 011 12222 23334321 1 11589999999
Q ss_pred HHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHH
Q 043305 395 LQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTF 474 (892)
Q Consensus 395 l~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~ 474 (892)
+.++.+.+ ....+..++.++.+||||++|+|+++++..++.+++++|||||.|+++|+++. .+|+..+++++.++.+
T Consensus 426 l~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i 502 (902)
T PRK10517 426 LEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRRI 502 (902)
T ss_pred HHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHHH
Confidence 99987543 12334567888999999999999999987677788999999999999999875 4667789999999999
Q ss_pred HHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCC
Q 043305 475 KKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDN 554 (892)
Q Consensus 475 ~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn 554 (892)
.+.+++++++|+||+++|||+++.++.. .....|+|++|+|+++++||+|||++++|++||++||+|+|+||||
T Consensus 503 ~~~~~~~a~~G~rvlavA~k~~~~~~~~------~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~ 576 (902)
T PRK10517 503 KRVTDTLNRQGLRVVAVATKYLPAREGD------YQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDS 576 (902)
T ss_pred HHHHHHHHhcCCEEEEEEEecCCccccc------cccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCC
Confidence 9999999999999999999988643211 0112378999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCC
Q 043305 555 IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGD 634 (892)
Q Consensus 555 ~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGD 634 (892)
+.||.+||++|||.. ..+++|+++++++++|+++.++ +..||||++|+||.++|+.||++|++||||||
T Consensus 577 ~~tA~~IA~~lGI~~-------~~v~~G~el~~l~~~el~~~~~----~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GD 645 (902)
T PRK10517 577 ELVAAKVCHEVGLDA-------GEVLIGSDIETLSDDELANLAE----RTTLFARLTPMHKERIVTLLKREGHVVGFMGD 645 (902)
T ss_pred HHHHHHHHHHcCCCc-------cCceeHHHHHhCCHHHHHHHHh----hCcEEEEcCHHHHHHHHHHHHHCCCEEEEECC
Confidence 999999999999952 2689999999999999999999 88999999999999999999999999999999
Q ss_pred CCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043305 635 GTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSS 714 (892)
Q Consensus 635 G~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~ 714 (892)
|+||+||||+|||||||| +|||+||++||+||+||||++|++++++||++|+||+|+++|+++.|+..++..++++++.
T Consensus 646 GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~ 724 (902)
T PRK10517 646 GINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL 724 (902)
T ss_pred CcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999999998888776
Q ss_pred CCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q 043305 715 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLE 794 (892)
Q Consensus 715 ~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~ 794 (892)
.+.||+|+|+||+|+++| ++++||++|||++++|+|||+. +...+ ++.++..+++..++.+..++..+..++..
T Consensus 725 ~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~-~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 798 (902)
T PRK10517 725 PFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRW-NPADL----GRFMVFFGPISSIFDILTFCLMWWVFHAN 798 (902)
T ss_pred hhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCC-CHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 568999999999999999 7899999999999999999983 22223 33344444444333222222222222211
Q ss_pred CCCcccccccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHH--HH--HhhhccccccCC
Q 043305 795 SDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI--IQ--FLGKFASTTRLN 870 (892)
Q Consensus 795 ~~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~--v~--~~~~~f~~~~L~ 870 (892)
. .......+|..|.+++++|+|+.+|+|+.+. ++++|++.+..++++++++++. ++ +++.+|+++||+
T Consensus 799 ~---~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 870 (902)
T PRK10517 799 T---PETQTLFQSGWFVVGLLSQTLIVHMIRTRRI-----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALP 870 (902)
T ss_pred c---hhhHhHHHHHHHHHHHHHHHHHHHhhccCCC-----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCC
Confidence 0 0001124455699999999999999998532 4557777777777777776544 45 678999999999
Q ss_pred --hHHHHHHHHHHHH
Q 043305 871 --WKHWIISVVIGFI 883 (892)
Q Consensus 871 --~~~w~~~i~~~~~ 883 (892)
+..|+++++++++
T Consensus 871 ~~~~~~~~~~~~~~~ 885 (902)
T PRK10517 871 LSYFPWLVAILAGYM 885 (902)
T ss_pred hhHHHHHHHHHHHHH
Confidence 7889888888777
No 10
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.6e-108 Score=1013.68 Aligned_cols=677 Identities=23% Similarity=0.309 Sum_probs=541.3
Q ss_pred ccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceec--
Q 043305 151 LQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYL-- 228 (892)
Q Consensus 151 ~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~-- 228 (892)
.+.+++++.|+|+. +||+++ |+++|+++||+|++++++++++|++++++|.|++.++|++|+++|+++|.+.+++
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~--ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~~iI 94 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNV--EVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEATVII 94 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHH--HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHh
Confidence 45899999999987 599988 8999999999999999999999999999999999999999999999999876664
Q ss_pred ------------------------------------C-------c-----------------------------EEEEE-
Q 043305 229 ------------------------------------A-------G-----------------------------VRFVR- 235 (892)
Q Consensus 229 ------------------------------------~-------g-----------------------------vl~~~- 235 (892)
. | ++-+.
T Consensus 95 ~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~ 174 (867)
T TIGR01524 95 ALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD 174 (867)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc
Confidence 1 2 00000
Q ss_pred ------Eeeccccc---cccc-------------eEEee--------------------------------cccccc---
Q 043305 236 ------FFTGHTKN---AYGT-------------IQFKA--------------------------------GKTKVS--- 258 (892)
Q Consensus 236 ------~~~~~~~~---~~~~-------------~~~~~--------------------------------~~~~~~--- 258 (892)
.++|.... ..+. .-|.+ ......
T Consensus 175 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~t~lq~~~ 254 (867)
T TIGR01524 175 LFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGV 254 (867)
T ss_pred eEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCCCCcHHHHH
Confidence 01110000 0000 00000 000000
Q ss_pred -c----------------------hhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccC
Q 043305 259 -D----------------------AVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMG 315 (892)
Q Consensus 259 -~----------------------~~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG 315 (892)
. ....+.+.+..+++++|++||||||+++|++++.|++||+|+|++||+++++|+||
T Consensus 255 ~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg 334 (867)
T TIGR01524 255 KSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFG 334 (867)
T ss_pred HHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhcc
Confidence 0 00124567888999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHH
Q 043305 316 SATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAIL 395 (892)
Q Consensus 316 ~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl 395 (892)
++|+||||||||||+|+|+|++++.... .+. .+++..+ ++|+.. . ...+||+|.|++
T Consensus 335 ~v~vic~DKTGTLT~~~m~v~~~~~~~~----------~~~--~~~l~~a-~l~~~~----~------~~~~~p~~~Al~ 391 (867)
T TIGR01524 335 AMDILCTDKTGTLTQDKIELEKHIDSSG----------ETS--ERVLKMA-WLNSYF----Q------TGWKNVLDHAVL 391 (867)
T ss_pred CccEEEecCCCccccCeEEEEEEecCCC----------CCH--HHHHHHH-HHhCCC----C------CCCCChHHHHHH
Confidence 9999999999999999999998763111 011 1222222 334321 0 125799999999
Q ss_pred HHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHH
Q 043305 396 QWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFK 475 (892)
Q Consensus 396 ~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~ 475 (892)
+++.+.. ....+..++.++.+||||++|+|+++++.+++.+++++|||||.|+++|+++. .+|...+++++.+++++
T Consensus 392 ~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~ 468 (867)
T TIGR01524 392 AKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQ 468 (867)
T ss_pred HHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHHHH
Confidence 9987542 23345577889999999999999999986666688999999999999999774 46777899999999999
Q ss_pred HHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCH
Q 043305 476 KAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNI 555 (892)
Q Consensus 476 ~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~ 555 (892)
+.+++++++|+||+++|||+++.++.. ..+..|++|+|+|+++++||+|||++++|++||++||+|+|+||||+
T Consensus 469 ~~~~~~a~~G~rvlavA~~~~~~~~~~------~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~ 542 (867)
T TIGR01524 469 DMTAEMNRQGIRVIAVATKTLKVGEAD------FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542 (867)
T ss_pred HHHHHHHhcCCEEEEEEEeccCccccc------ccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 999999999999999999988653211 01123689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCC
Q 043305 556 QTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDG 635 (892)
Q Consensus 556 ~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG 635 (892)
.||++||+++||.++ .+++|.++++++++|+.+.++ +..||||++|+||.++|+.||++|++|||||||
T Consensus 543 ~tA~aIA~~lGI~~~-------~v~~g~~l~~~~~~el~~~~~----~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDG 611 (867)
T TIGR01524 543 IVTARICQEVGIDAN-------DFLLGADIEELSDEELARELR----KYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDG 611 (867)
T ss_pred HHHHHHHHHcCCCCC-------CeeecHhhhhCCHHHHHHHhh----hCeEEEECCHHHHHHHHHHHHhCCCEEEEECCC
Confidence 999999999999632 589999999999999999999 889999999999999999999999999999999
Q ss_pred CCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043305 636 TNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSG 715 (892)
Q Consensus 636 ~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~ 715 (892)
+||+||||+|||||||| +|||+||++||+||+||||++|+++++|||++|+||+|+++|+++.|+..++..+++.++..
T Consensus 612 vNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~ 690 (867)
T TIGR01524 612 INDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIP 690 (867)
T ss_pred cccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999998888888776
Q ss_pred CCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 043305 716 DVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLES 795 (892)
Q Consensus 716 ~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~ 795 (892)
+.||+++|+||+|++|| +|++||++|||++++|++||+ ++++.+. +.++..+++..++.+..++..+..+...+
T Consensus 691 ~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 764 (867)
T TIGR01524 691 FLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMG----RFMLCIGPVSSIFDIATFLLMWFVFSANT 764 (867)
T ss_pred hhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHH----HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 69999999999999999 799999999999999987776 6665444 34444555443332222221111111111
Q ss_pred CCcccccccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHH--HH--hhhccccccC--
Q 043305 796 DSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILII--QF--LGKFASTTRL-- 869 (892)
Q Consensus 796 ~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v--~~--~~~~f~~~~L-- 869 (892)
. ......+|..|.+++++|++|.||+|+.+. ++|+|++.+..+++++++|++++ ++ ++.+|+++||
T Consensus 765 ~---~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~ 836 (867)
T TIGR01524 765 V---EEQALFQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPL 836 (867)
T ss_pred h---hhhhHHHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCc
Confidence 0 011234788899999999999999997532 45578888888888888886654 45 4889999987
Q ss_pred ChHHHHHHHHHHHHHHHHHhh
Q 043305 870 NWKHWIISVVIGFIRLFEHPV 890 (892)
Q Consensus 870 ~~~~w~~~i~~~~~~l~~~ei 890 (892)
++..|+++++++++ ++.|+
T Consensus 837 ~~~~~~~~~~~~~~--~~~e~ 855 (867)
T TIGR01524 837 SYFPWLIAILVGYM--ATMQL 855 (867)
T ss_pred cHHHHHHHHHHHHH--HHHHH
Confidence 66788888887776 44443
No 11
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=6.7e-108 Score=1015.51 Aligned_cols=622 Identities=33% Similarity=0.518 Sum_probs=528.1
Q ss_pred hhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeC
Q 043305 262 DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVG 341 (892)
Q Consensus 262 ~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~ 341 (892)
..+...+..++++++++||||||+++|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..
T Consensus 234 ~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 313 (917)
T TIGR01116 234 QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVAL 313 (917)
T ss_pred HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEec
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred Ccc-------------cCCCCCC-------CCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHc
Q 043305 342 GRK-------------MNPTDSN-------SQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKL 401 (892)
Q Consensus 342 ~~~-------------~~~~~~~-------~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~ 401 (892)
+.. +++.... ....+...+.+..+.+.|+++....+++++.++..|||+|.||++++.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~ 393 (917)
T TIGR01116 314 DPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKM 393 (917)
T ss_pred CCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHc
Confidence 531 1110000 00011222333334444444443222222334557999999999999998
Q ss_pred CCChhh----------------hhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccc
Q 043305 402 GMNFEA----------------VRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQ 465 (892)
Q Consensus 402 g~~~~~----------------~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~ 465 (892)
|.+... .++++++++.+||||+||||+|+++. ++++++|+|||||.|+++|++++..+|...|
T Consensus 394 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~ 472 (917)
T TIGR01116 394 GLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVP 472 (917)
T ss_pred CCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeee
Confidence 876543 24567899999999999999999985 4668999999999999999999887888899
Q ss_pred cCHHHHHHHHHHHHHHHh-ccCeEEEEEEeccccCCCCc-hhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhC
Q 043305 466 MDEDKLLTFKKAIEDMAS-SSLRCVAIAYRTYERERIPD-EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIA 543 (892)
Q Consensus 466 l~~~~~~~~~~~i~~~a~-~glR~l~~Ayk~~~~~~~~~-~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~A 543 (892)
++++.++++++.+++|++ +|+||+++|||+++.+.... .......+..|+||+|+|+++++||+|++++++|++||+|
T Consensus 473 l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~a 552 (917)
T TIGR01116 473 LTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTA 552 (917)
T ss_pred CCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHC
Confidence 999999999999999999 99999999999986432110 0001122446899999999999999999999999999999
Q ss_pred CCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHH
Q 043305 544 GVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALR 623 (892)
Q Consensus 544 GI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq 623 (892)
||+++|+|||+..||.+||+++||..++.+ ....+++|+++.+++++++.+... +..||||++|+||.++|+.+|
T Consensus 553 GI~v~miTGD~~~tA~~ia~~~gi~~~~~~-v~~~~~~g~~l~~~~~~~~~~~~~----~~~v~ar~~P~~K~~iV~~lq 627 (917)
T TIGR01116 553 GIRVIMITGDNKETAEAICRRIGIFSPDED-VTFKSFTGREFDEMGPAKQRAACR----SAVLFSRVEPSHKSELVELLQ 627 (917)
T ss_pred CCEEEEecCCCHHHHHHHHHHcCCCCCCcc-ccceeeeHHHHhhCCHHHHHHhhh----cCeEEEecCHHHHHHHHHHHH
Confidence 999999999999999999999999865321 113578999999999999988887 889999999999999999999
Q ss_pred HcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 624 KRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAA 703 (892)
Q Consensus 624 ~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~ 703 (892)
+.|++|+|+|||+||+||||+|||||||| +|+++||++||+++.||||++|+++++|||++|+||+|+++|+++.|+..
T Consensus 628 ~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~ 706 (917)
T TIGR01116 628 EQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGE 706 (917)
T ss_pred hcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 043305 704 LVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVL 783 (892)
Q Consensus 704 ~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l 783 (892)
+++.+++.++..+.||+++|+||+|+++|++|+++|++|||++++|++||+.++++++++.||+.+++++++|.++.+..
T Consensus 707 ~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 786 (917)
T TIGR01116 707 VVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGG 786 (917)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988889999999999999999999999999999999999999999999999999999999999998775443
Q ss_pred HHHhhhhcccCC---------C--Cc-----ccccccchhHHHHHHHHHHHhhhhcccCCCCccccc-CCcchHHHHHHH
Q 043305 784 NFQGKRILNLES---------D--SN-----AHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFG-GITKNRLFMGIV 846 (892)
Q Consensus 784 ~~~g~~~~~~~~---------~--~~-----~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~-~~~~N~~f~~~i 846 (892)
+++.....+..+ . +. ......++|++|++||++|+||.||||+. +.++|+ ++++|++|++++
T Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~ 865 (917)
T TIGR01116 787 FVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWVNKWLIGAI 865 (917)
T ss_pred HHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCccCHHHHHHH
Confidence 332211111100 0 00 01235678999999999999999999996 457776 789999999999
Q ss_pred HHHHHHHHHH--HHHhhhccccccCChHHHHHHHHHHHHHHHHHhhc
Q 043305 847 AVTLVLQILI--IQFLGKFASTTRLNWKHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 847 ~~~~~~qi~~--v~~~~~~f~~~~L~~~~w~~~i~~~~~~l~~~eiv 891 (892)
++++++|+++ +|+++.+|+++||++.+|++|++++++.+++.|+.
T Consensus 866 ~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~ 912 (917)
T TIGR01116 866 CLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVL 912 (917)
T ss_pred HHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 78999999999999999999999999999998863
No 12
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-105 Score=910.94 Aligned_cols=732 Identities=27% Similarity=0.388 Sum_probs=592.1
Q ss_pred ccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--c---
Q 043305 151 LQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIK--T--- 225 (892)
Q Consensus 151 ~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~--~--- 225 (892)
+++++|+++++||..+||+.. ++.+|++.-|+|.+++||..+-|..+.+++....-++|.++|+++++.=.+ +
T Consensus 42 ~~~~eL~~r~~t~~~~Glt~~--~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~ 119 (1019)
T KOG0203|consen 42 LSVDELCERYGTSVSQGLTSQ--EAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTED 119 (1019)
T ss_pred CCHHHHHHHhcCChhhcccHH--HHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCC
Confidence 349999999999999999998 899999999999999999999999999999999999999999999752110 0
Q ss_pred ---------------------------eec--------------------Cc----------------------------
Q 043305 226 ---------------------------EYL--------------------AG---------------------------- 230 (892)
Q Consensus 226 ---------------------------eg~--------------------~g---------------------------- 230 (892)
|.+ ||
T Consensus 120 ~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADi 199 (1019)
T KOG0203|consen 120 DPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADI 199 (1019)
T ss_pred CCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCccccee
Confidence 100 11
Q ss_pred -EEEEEE-------eeccc-------------------------------------------------------cccccc
Q 043305 231 -VRFVRF-------FTGHT-------------------------------------------------------KNAYGT 247 (892)
Q Consensus 231 -vl~~~~-------~~~~~-------------------------------------------------------~~~~~~ 247 (892)
++..+. ++|.. .+..++
T Consensus 200 Riis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~ 279 (1019)
T KOG0203|consen 200 RIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTP 279 (1019)
T ss_pred EEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCc
Confidence 000000 00000 000001
Q ss_pred eE-----Eeecccc-----c-c------chhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeecccc
Q 043305 248 IQ-----FKAGKTK-----V-S------DAVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSA 310 (892)
Q Consensus 248 ~~-----~~~~~~~-----~-~------~~~~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a 310 (892)
.+ |..-.+. . . ....++++++...+.++|+.+|||||..||.+|+.-.+||+++|.+||+|.|
T Consensus 280 ~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLea 359 (1019)
T KOG0203|consen 280 IAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 359 (1019)
T ss_pred chhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeh
Confidence 00 0000000 0 0 0013456666677889999999999999999999999999999999999999
Q ss_pred ccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCC-------CCCCCCHHHHHHHHHHHHhcCCCccccCCCCC--
Q 043305 311 CETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTD-------SNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGG-- 381 (892)
Q Consensus 311 ~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~-------~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~-- 381 (892)
+||+|+.++||||||||||+|+|+|.++|.++....... .....++....++..+..||... . .+.+.+
T Consensus 360 vetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~-~-~~gq~dvP 437 (1019)
T KOG0203|consen 360 VETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAV-F-KPGQDDVP 437 (1019)
T ss_pred eeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcce-e-cccccCCc
Confidence 999999999999999999999999999999876432211 11122445556666666666542 2 222222
Q ss_pred --CccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecCC---CcEEEEEcCceeeeecccccc
Q 043305 382 --EAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPN---SEVHIHWKGAAEIVLDSCTGY 456 (892)
Q Consensus 382 --~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~---~~~~~~~KGA~e~IL~~C~~~ 456 (892)
+....||+.|.||++|+...-.+.+.+|..++.+..+||||.+|+.-.+++..+ .++.+.+|||||.++++|+.+
T Consensus 438 v~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi 517 (1019)
T KOG0203|consen 438 VLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTI 517 (1019)
T ss_pred eeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccce
Confidence 234679999999999998665667889999999999999999999999987654 467788999999999999987
Q ss_pred ccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh--hhhccCCCCCcEEEEEEEecCCCchhHH
Q 043305 457 IDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE--LSRWALPEDDLVLLAIVGIKDPCRPSVK 534 (892)
Q Consensus 457 ~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~--~~~~~~~e~~l~~lGlvgi~DplR~~v~ 534 (892)
. .+|+..|++++.++.+.....++...|-||++|+++.++.+++|..-. .+..+.+..++.|+|++.+.||||..+|
T Consensus 518 ~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP 596 (1019)
T KOG0203|consen 518 L-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVP 596 (1019)
T ss_pred e-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCc
Confidence 5 478999999999999999999999999999999999998776664322 1233456789999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-------------------CCCCceecchhhhhcCHHHHHH
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-------------------ATEPNIIEGKSFRALSETQREE 595 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-------------------~~~~~vi~G~~~~~l~~~e~~~ 595 (892)
+||.+||.|||+|+|+|||++.||+|||++.||+....+ .....|+.|.++..++.+++++
T Consensus 597 ~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~ 676 (1019)
T KOG0203|consen 597 DAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDE 676 (1019)
T ss_pred hhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHH
Confidence 999999999999999999999999999999998875442 1256889999999999999999
Q ss_pred HhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHH
Q 043305 596 IAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASV 675 (892)
Q Consensus 596 i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sI 675 (892)
++.++ .--||||.||+||+.||+..|++|.+|++||||+||+||||+||||||||++|+|++|+|||+||+||||+||
T Consensus 677 il~nh--~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASI 754 (1019)
T KOG0203|consen 677 LLQNH--QEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASI 754 (1019)
T ss_pred HHHhC--CceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhh
Confidence 99854 4479999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCC
Q 043305 676 VKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVG 755 (892)
Q Consensus 676 v~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~ 755 (892)
|..+++||.+|+|+||.|.|.||.|+..+...+++.+++.|.|+.++++|.+.|.+|..||++||+|+|+.++|+|+|+.
T Consensus 755 VtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~ 834 (1019)
T KOG0203|consen 755 VTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRN 834 (1019)
T ss_pred eeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -CCCCCccHHHHHHHHHH-HHHHHHHHHHHHHHhhh--------hcccCC-------CC-------------cccccccc
Q 043305 756 -RREPLITNIMWRNLLIQ-ASYQVSVLLVLNFQGKR--------ILNLES-------DS-------------NAHSNKVK 805 (892)
Q Consensus 756 -r~~~li~~~m~~~i~~~-ai~q~~v~~~l~~~g~~--------~~~~~~-------~~-------------~~~~~~~~ 805 (892)
+++.|++.+....-.+| +++|++..|+.+|.-.. +.++.. .+ ......+.
T Consensus 835 p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc 914 (1019)
T KOG0203|consen 835 PKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTC 914 (1019)
T ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhh
Confidence 77889998766444433 56776666555443111 111100 00 01112345
Q ss_pred hhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHH--HHHHHHHhhhccccccCChHHHHHHHHHHHH
Q 043305 806 NTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVL--QILIIQFLGKFASTTRLNWKHWIISVVIGFI 883 (892)
Q Consensus 806 ~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~--qi~~v~~~~~~f~~~~L~~~~w~~~i~~~~~ 883 (892)
+|..|.++|.+|+++.+-|... +.++|+.-++||+++..+++.+++ ++.+++.....+++.||.|.+|+..+..+++
T Consensus 915 ~taFfvsIvV~Q~adLii~KTR-RnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~il 993 (1019)
T KOG0203|consen 915 YTAFFISIVVVQWADLIICKTR-RNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGIL 993 (1019)
T ss_pred hhheeeeehHHhHhhHHhhhcc-hhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceee
Confidence 7889999999999999988654 567888668999988776665544 4445677888999999999999999999998
Q ss_pred HHHHHhh
Q 043305 884 RLFEHPV 890 (892)
Q Consensus 884 ~l~~~ei 890 (892)
.|+.+|+
T Consensus 994 IfvydE~ 1000 (1019)
T KOG0203|consen 994 IFVYDEV 1000 (1019)
T ss_pred eeeHHHH
Confidence 8888774
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.5e-97 Score=932.20 Aligned_cols=575 Identities=21% Similarity=0.266 Sum_probs=457.0
Q ss_pred HHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcc
Q 043305 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRK 344 (892)
Q Consensus 265 ~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~ 344 (892)
.+.+..++++++++||||||+++|+++++|++||+|+|++||+++++|++|++++||||||||||+|+|+|.+++..+..
T Consensus 396 ~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~ 475 (1054)
T TIGR01657 396 GKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGN 475 (1054)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCc
Confidence 35567789999999999999999999999999999999999999999999999999999999999999999999875431
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHc-CC-C---hhh----------hh
Q 043305 345 MNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKL-GM-N---FEA----------VR 409 (892)
Q Consensus 345 ~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~-g~-~---~~~----------~r 409 (892)
.................+..+++.|++... . ++ +..|||+|.|+++++... .. + ... -.
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~--~--~~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 549 (1054)
T TIGR01657 476 QEFLKIVTEDSSLKPSITHKALATCHSLTK--L--EG--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPP 549 (1054)
T ss_pred cccccccccccccCchHHHHHHHhCCeeEE--E--CC--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCC
Confidence 110000000000111223345556665432 1 12 578999999999986311 11 0 000 02
Q ss_pred cccceeeeeccccCCceeEEEEecCC-CcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeE
Q 043305 410 SECSVLHVFPFNSLKKRGGVAVQLPN-SEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRC 488 (892)
Q Consensus 410 ~~~~i~~~~pF~S~rK~msvvv~~~~-~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~ 488 (892)
.++++++.+||+|++|||||+++.++ +++++++|||||.|+++|+.. ..++.+.+.+++|+++|+||
T Consensus 550 ~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RV 617 (1054)
T TIGR01657 550 QELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRV 617 (1054)
T ss_pred ceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEE
Confidence 46788999999999999999998654 567899999999999999741 12456888899999999999
Q ss_pred EEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 489 VAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 489 l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
||+|||+++..+..... ...++..|+||+|+|+++++||+||+++++|+.|++|||+|+|+||||+.||.+||++|||+
T Consensus 618 LalA~k~l~~~~~~~~~-~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 618 LALAYKELPKLTLQKAQ-DLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred EEEEEeecCccchhhhh-hccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 99999998742211110 11234578999999999999999999999999999999999999999999999999999998
Q ss_pred CCcCC------------------------------------------------CCCCceecchhhhh---cCHHHHHHHh
Q 043305 569 TSEAD------------------------------------------------ATEPNIIEGKSFRA---LSETQREEIA 597 (892)
Q Consensus 569 ~~~~~------------------------------------------------~~~~~vi~G~~~~~---l~~~e~~~i~ 597 (892)
+++.. .....+++|++|+. +.++++.+++
T Consensus 697 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~ 776 (1054)
T TIGR01657 697 NPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLL 776 (1054)
T ss_pred CCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHH
Confidence 65320 01136899999876 4667888888
Q ss_pred cccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHH
Q 043305 598 GEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 598 ~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~ 677 (892)
. +..||||++|+||.++|+.||+.|++|||||||+||+||||+||||||||. +|+ ..+||+++.+|||++|++
T Consensus 777 ~----~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~--~da-s~AA~f~l~~~~~~~I~~ 849 (1054)
T TIGR01657 777 S----HTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSE--AEA-SVAAPFTSKLASISCVPN 849 (1054)
T ss_pred h----cCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecc--ccc-eeecccccCCCcHHHHHH
Confidence 8 889999999999999999999999999999999999999999999999983 354 489999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCC
Q 043305 678 VVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRR 757 (892)
Q Consensus 678 ~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~ 757 (892)
+|+|||++|.|++++++|.+.+++...+..++ ++....||+++|+||+|+++|++++++|+.+||.+++|++||.
T Consensus 850 ~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~--- 924 (1054)
T TIGR01657 850 VIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP--- 924 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---
Confidence 99999999999999999999999887555443 3345699999999999999999999999999999999999994
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc---CC--CCcccccccchhHHHHHHHHHHHhhhhcccCCCCccc
Q 043305 758 EPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNL---ES--DSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNI 832 (892)
Q Consensus 758 ~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~---~~--~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~ 832 (892)
++++++.++..+++|+++++++.++.++.....-.. .. .+........+|++| .++.+|.++.+++++. ..++
T Consensus 925 ~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf 1002 (1054)
T TIGR01657 925 SNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPF 1002 (1054)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-Ccch
Confidence 689999999999999999998887776654321110 00 000122344579999 5555566666777775 4466
Q ss_pred ccCCcchHHHHHHHHHHHHHHHH----HHHHhhhccccccCChH
Q 043305 833 FGGITKNRLFMGIVAVTLVLQIL----IIQFLGKFASTTRLNWK 872 (892)
Q Consensus 833 f~~~~~N~~f~~~i~~~~~~qi~----~v~~~~~~f~~~~L~~~ 872 (892)
.+++++|++|++.+++++++++. ++++++.+|+++|++..
T Consensus 1003 ~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1046 (1054)
T TIGR01657 1003 REPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQE 1046 (1054)
T ss_pred hhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCHH
Confidence 67999999998887777666653 25789999999999853
No 14
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.4e-95 Score=888.22 Aligned_cols=515 Identities=22% Similarity=0.346 Sum_probs=421.6
Q ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCc
Q 043305 264 AIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR 343 (892)
Q Consensus 264 ~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~ 343 (892)
+.+.+.++++++|++||||||+++|++++++++||+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 233 ~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~ 312 (755)
T TIGR01647 233 FREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFN 312 (755)
T ss_pred HHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCC
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999986432
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccC
Q 043305 344 KMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSL 423 (892)
Q Consensus 344 ~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~ 423 (892)
. .+++ +++..+..+|. +..+||+|.|+++++.+.+ ..+..+++++.+||+|.
T Consensus 313 ~---------~~~~--~~l~~a~~~~~-------------~~~~~pi~~Ai~~~~~~~~----~~~~~~~~~~~~pf~~~ 364 (755)
T TIGR01647 313 G---------FDKD--DVLLYAALASR-------------EEDQDAIDTAVLGSAKDLK----EARDGYKVLEFVPFDPV 364 (755)
T ss_pred C---------CCHH--HHHHHHHHhCC-------------CCCCChHHHHHHHHHHHhH----HHHhcCceEEEeccCCC
Confidence 1 1111 23333333331 1147999999999987643 33456788899999999
Q ss_pred CceeEEEEecCC-CcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCC
Q 043305 424 KKRGGVAVQLPN-SEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIP 502 (892)
Q Consensus 424 rK~msvvv~~~~-~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~ 502 (892)
+|+|+++++.++ ++.+.++|||||.++++|++. ++.++++++.+++++++|+|++++|||+
T Consensus 365 ~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~------- 426 (755)
T TIGR01647 365 DKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD------- 426 (755)
T ss_pred CCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc-------
Confidence 999999987653 667788999999999999742 3446678889999999999999999973
Q ss_pred chhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecc
Q 043305 503 DEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEG 582 (892)
Q Consensus 503 ~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G 582 (892)
.|++|+|+|+++++||+|||++++|++||++||+|+|+||||+.||++||++|||..... ....+.+|
T Consensus 427 ----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~--~~~~l~~~ 494 (755)
T TIGR01647 427 ----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIY--TADVLLKG 494 (755)
T ss_pred ----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc--CHHHhcCC
Confidence 146899999999999999999999999999999999999999999999999999974311 12245567
Q ss_pred hhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhc
Q 043305 583 KSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKES 662 (892)
Q Consensus 583 ~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkea 662 (892)
.++..+++++++++++ +..||||++|+||.++|+.||++|++|||||||+||+||||+|||||||| +|||+||++
T Consensus 495 ~~~~~~~~~~~~~~~~----~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkea 569 (755)
T TIGR01647 495 DNRDDLPSGELGEMVE----DADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSA 569 (755)
T ss_pred cchhhCCHHHHHHHHH----hCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHh
Confidence 7777899999999999 88999999999999999999999999999999999999999999999999 899999999
Q ss_pred ccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhhcccC
Q 043305 663 SDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATE 742 (892)
Q Consensus 663 aDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~alaLa~e 742 (892)
||+||+||||++|++++++||++|+||+|+++|+++.|+..+++.+++.++.+ .||+|+|+||+|+++|. +++++++|
T Consensus 570 ADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~ 647 (755)
T TIGR01647 570 ADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYD 647 (755)
T ss_pred CCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCC
Confidence 99999999999999999999999999999999999999998887777766444 56999999999999996 69999999
Q ss_pred CCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhh---hcccCCCCcccccccchhHHHHHHHHHHHh
Q 043305 743 PPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKR---ILNLESDSNAHSNKVKNTLIFNSFVLCQIF 819 (892)
Q Consensus 743 ~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~---~~~~~~~~~~~~~~~~~T~~F~~fV~~qvf 819 (892)
++++. |+| +...++ .+++.++..+.+..+..+.++++... .+...+. .......+|+.|.++++.|.|
T Consensus 648 ~~~~~---~~p---~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~t~~f~~~~~~~~~ 718 (755)
T TIGR01647 648 NVKPS---KLP---QRWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL--QLLHGNLQSLIYLQVSISGQA 718 (755)
T ss_pred CCCCC---CCC---CccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc--cccHhhhHHHHHHHHHHHHHH
Confidence 98753 333 333444 67777888888887765555543321 1101110 012245789999999999999
Q ss_pred hhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHH
Q 043305 820 NEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQIL 855 (892)
Q Consensus 820 n~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~ 855 (892)
+.+++|+.. ..|+.. .|++++...++.+++.++
T Consensus 719 ~~~~~r~~~--~~~~~~-p~~~l~~~~~~~~~~~~~ 751 (755)
T TIGR01647 719 TIFVTRTHG--FFWSER-PGKLLFIAFVIAQIIATF 751 (755)
T ss_pred HHheeccCC--CCcccC-CcHHHHHHHHHHHHHHHH
Confidence 999999753 334433 455555554444444433
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=3.3e-85 Score=824.66 Aligned_cols=604 Identities=23% Similarity=0.293 Sum_probs=456.9
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cceecCcEEEEEEeeccccccccceEEeecc-ccccc
Q 043305 182 FGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGI-KTEYLAGVRFVRFFTGHTKNAYGTIQFKAGK-TKVSD 259 (892)
Q Consensus 182 ~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~-~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 259 (892)
.|.|.-..+.++|.++.-.+.+--.+++++++.++++.+++. +.. .... . .|.... .....
T Consensus 229 ~~~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~-------------~~~~---~-~~yl~~~~~~~~ 291 (1057)
T TIGR01652 229 LMRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWND-------------AHGK---D-LWYIRLDVSERN 291 (1057)
T ss_pred hhhcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheec-------------ccCC---C-ccceecCccccc
Confidence 366776667777888777766655444444444444444432 210 0000 0 010000 00001
Q ss_pred hhhhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHH------HHHHhCC----ceeeccccccccCceeEEEeCCCCCcc
Q 043305 260 AVDGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSM------RKMMADK----ALVRRLSACETMGSATTICSDKTGTLT 329 (892)
Q Consensus 260 ~~~~~~~~~~~avtilvvavPegLplavtl~la~~~------~~m~k~~----~lVr~l~a~EtlG~vt~IcsDKTGTLT 329 (892)
....++..|..++.+++.+||++||..+++++++.+ ++|++++ ++||+++++|+||++++||||||||||
T Consensus 292 ~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT 371 (1057)
T TIGR01652 292 AAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLT 371 (1057)
T ss_pred chhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCcee
Confidence 112355567788999999999999999999999999 8898754 999999999999999999999999999
Q ss_pred cCceEEEEEEeCCcccCCCCC---------CC-------------------------------CCCHHHHHHHHHHHHhc
Q 043305 330 LNQMTVVEAYVGGRKMNPTDS---------NS-------------------------------QLSPMVTSLLVEGIAQN 369 (892)
Q Consensus 330 ~n~M~V~~~~~~~~~~~~~~~---------~~-------------------------------~~~~~~~~ll~~~i~~n 369 (892)
+|+|++++++++|..|..... .. ...+...+++ .+++.|
T Consensus 372 ~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~lC 450 (1057)
T TIGR01652 372 QNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFF-LALALC 450 (1057)
T ss_pred eeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHH-HHHHhc
Confidence 999999999998876542100 00 0011123333 344555
Q ss_pred CCCccccCCCC-C-CccccCChHHHHHHHHHHHcCCChhh--------------hhcccceeeeeccccCCceeEEEEec
Q 043305 370 TTGSVYLPPNG-G-EAEVSGSPTEKAILQWGMKLGMNFEA--------------VRSECSVLHVFPFNSLKKRGGVAVQL 433 (892)
Q Consensus 370 ~~~~~~~~~~~-~-~~~~~g~ptE~ALl~~a~~~g~~~~~--------------~r~~~~i~~~~pF~S~rK~msvvv~~ 433 (892)
|+......+++ + ..+..|||+|.||+++|.+.|+.+.. ...++++++++||+|+||||||+++.
T Consensus 451 ~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~ 530 (1057)
T TIGR01652 451 HTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRN 530 (1057)
T ss_pred CcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEe
Confidence 55433221111 1 12346999999999999999976542 22368899999999999999999998
Q ss_pred CCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchh--------
Q 043305 434 PNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE-------- 505 (892)
Q Consensus 434 ~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~-------- 505 (892)
+++++.+++|||||.|+++|++. +++.++.+.+.+++|+.+|+||+++|||.++++++.+..
T Consensus 531 ~~~~~~l~~KGA~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~ 600 (1057)
T TIGR01652 531 PDGRIKLLCKGADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEAST 600 (1057)
T ss_pred CCCeEEEEEeCcHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 88889999999999999999741 234567889999999999999999999999754322110
Q ss_pred -------h-hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC----
Q 043305 506 -------E-LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD---- 573 (892)
Q Consensus 506 -------~-~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~---- 573 (892)
. ....+.+|+||+|+|++|++||+|+||+++|++|++|||+|||+|||+++||.+||++|||++++..
T Consensus 601 ~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i 680 (1057)
T TIGR01652 601 ALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVI 680 (1057)
T ss_pred hhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEE
Confidence 0 0112347899999999999999999999999999999999999999999999999999999976531
Q ss_pred --------------------------------CCCCceecchhhhhcCHHH----HHHHhcccccceEEEeccCHhhHHH
Q 043305 574 --------------------------------ATEPNIIEGKSFRALSETQ----REEIAGEDFGMICVMGRSSPSDKLL 617 (892)
Q Consensus 574 --------------------------------~~~~~vi~G~~~~~l~~~e----~~~i~~~~~~~~~V~aR~sP~dK~~ 617 (892)
....++++|+++..+.+++ +.+++. .++..||||++|+||.+
T Consensus 681 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~--~~~~vV~aR~sP~qK~~ 758 (1057)
T TIGR01652 681 TSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLAL--KCKAVICCRVSPSQKAD 758 (1057)
T ss_pred ecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHh--hCCEEEEeCCCHHHHHH
Confidence 0123589999998665543 334444 23557999999999999
Q ss_pred HHHHHHHc-CCeEEEeCCCCCChHhhhcCCeeEeecCCCcH--hhhhcccEEEcCCCchHHHHHH-HHHHHHHHHHHHHH
Q 043305 618 LVQALRKR-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKESSDIIILDDNFASVVKVV-RWGRSVYANIQKFI 693 (892)
Q Consensus 618 lV~~Lq~~-g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~--vAkeaaDiil~ddnf~sIv~~i-~~GR~v~~nI~k~i 693 (892)
+|+.+|+. |++|+|||||+||+||||+|||||+ +.|+| .|+++||++|.+ |++|.+++ .+||++|+|+++++
T Consensus 759 IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIg--i~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i 834 (1057)
T TIGR01652 759 VVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVG--ISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMI 834 (1057)
T ss_pred HHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeE--ecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHH
Confidence 99999998 9999999999999999999999995 46787 599999999986 99999998 88999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC---CCchhHHHHHHHHhhhhhhhhhhccc--CCCCccccccCCC----CCCCCCccHH
Q 043305 694 QFQLTVNVAALVINFVAAVSSG---DVPLNAVQLLWVNLIMDTLGALALAT--EPPTDHLMQRSPV----GRREPLITNI 764 (892)
Q Consensus 694 ~f~lt~Nv~~~~~~~~~~~~~~---~~pl~~vqlLwvnli~d~l~alaLa~--e~p~~~lm~r~P~----~r~~~li~~~ 764 (892)
+|+++.|++.+++.+++.++.+ .+|+++++++|+|+++|++|++++|. +++++++|.++|+ +++.++++..
T Consensus 835 ~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~ 914 (1057)
T TIGR01652 835 LYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTK 914 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHH
Confidence 9999999999999999888754 46899999999999999999999986 6778899999997 6778899988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh--cccCCCCcccccccchhHHHHHHHHHHHhhh
Q 043305 765 MWRNLLIQASYQVSVLLVLNFQGKRI--LNLESDSNAHSNKVKNTLIFNSFVLCQIFNE 821 (892)
Q Consensus 765 m~~~i~~~ai~q~~v~~~l~~~g~~~--~~~~~~~~~~~~~~~~T~~F~~fV~~qvfn~ 821 (892)
.+..+++.++||+++++++.+..... ...+|. ........+++|.++++...+..
T Consensus 915 ~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~ 971 (1057)
T TIGR01652 915 TFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGS--LDDFSSVGVIVFTALVVIVNLKI 971 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCc--ccchhhHHHHHHHHHHHHHHHHH
Confidence 88888999999998887665433211 011121 11223455677777766655443
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.7e-76 Score=740.13 Aligned_cols=503 Identities=22% Similarity=0.304 Sum_probs=404.4
Q ss_pred HHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCC----------ceeeccccccccCceeEEEeCCCCCcccCceEEEE
Q 043305 268 LTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK----------ALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE 337 (892)
Q Consensus 268 ~~~avtilvvavPegLplavtl~la~~~~~m~k~~----------~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~ 337 (892)
|...+.++-..||++|+..++++..+....|.+|+ +.||+.+.+|+||++++||||||||||+|+|++++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 34445566699999999999999977677887776 77999999999999999999999999999999999
Q ss_pred EEeCCcccCCCCC--------------------CCC--C----------------CHHHHHHHHHHHHhcCCCccccCCC
Q 043305 338 AYVGGRKMNPTDS--------------------NSQ--L----------------SPMVTSLLVEGIAQNTTGSVYLPPN 379 (892)
Q Consensus 338 ~~~~~~~~~~~~~--------------------~~~--~----------------~~~~~~ll~~~i~~n~~~~~~~~~~ 379 (892)
++++|..|..... ... . .+.+.+ +..+++.||+......++
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-fl~~lalChtv~~~~~~~ 552 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHD-FFLALAACNTIVPIVVDD 552 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHH-HHHHHHhcCCceeeccCC
Confidence 9998766632100 000 0 011223 344556666653321111
Q ss_pred C-C----Cc-cccCChHHHHHHHHHHHcCC------------ChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEE
Q 043305 380 G-G----EA-EVSGSPTEKAILQWGMKLGM------------NFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIH 441 (892)
Q Consensus 380 ~-~----~~-~~~g~ptE~ALl~~a~~~g~------------~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~ 441 (892)
+ + .. +..+||+|.||+++|.++|+ +....+.++++++++||+|+||||||+++.+++.+.+|
T Consensus 553 ~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~ 632 (1178)
T PLN03190 553 TSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVF 632 (1178)
T ss_pred CCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEE
Confidence 1 1 12 33459999999999999997 44455678999999999999999999999888889999
Q ss_pred EcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh---------------
Q 043305 442 WKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE--------------- 506 (892)
Q Consensus 442 ~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~--------------- 506 (892)
+|||||.|+++|++.. +++.++.+.+.+++||++|+||||+|||+++.+++.+...
T Consensus 633 ~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~ 703 (1178)
T PLN03190 633 VKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAAL 703 (1178)
T ss_pred EecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHH
Confidence 9999999999997542 2335677889999999999999999999997543321100
Q ss_pred -hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC------------
Q 043305 507 -LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD------------ 573 (892)
Q Consensus 507 -~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~------------ 573 (892)
....+.+|+||+++|+++++||+|+|++++|++|++|||+|||+|||+.+||.+||++|||++++..
T Consensus 704 l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~ 783 (1178)
T PLN03190 704 LRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESC 783 (1178)
T ss_pred HHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhH
Confidence 0112457899999999999999999999999999999999999999999999999999999876431
Q ss_pred --------------------------------CCCCceecchhhhhcCH----HHHHHHhcccccceEEEeccCHhhHHH
Q 043305 574 --------------------------------ATEPNIIEGKSFRALSE----TQREEIAGEDFGMICVMGRSSPSDKLL 617 (892)
Q Consensus 574 --------------------------------~~~~~vi~G~~~~~l~~----~e~~~i~~~~~~~~~V~aR~sP~dK~~ 617 (892)
....++++|.++..+.+ +++.++.. .|++.||||+||.||.+
T Consensus 784 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~--~~~~VI~cR~sP~QKa~ 861 (1178)
T PLN03190 784 RKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLAS--KCSVVLCCRVAPLQKAG 861 (1178)
T ss_pred HHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHH--hCCEEEEecCCHHHHHH
Confidence 01237899999988765 34445554 23566899999999999
Q ss_pred HHHHHHHc-CCeEEEeCCCCCChHhhhcCCeeEeecCCCcH--hhhhcccEEEcCCCchHHHHHH-HHHHHHHHHHHHHH
Q 043305 618 LVQALRKR-GDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKESSDIIILDDNFASVVKVV-RWGRSVYANIQKFI 693 (892)
Q Consensus 618 lV~~Lq~~-g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~--vAkeaaDiil~ddnf~sIv~~i-~~GR~v~~nI~k~i 693 (892)
+|+.+|++ +++|+|+|||+||+||||+||||| |++|+| .|+.+||+.|.. |+.+.+++ .|||+.|.|+.+++
T Consensus 862 IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred HHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHH
Confidence 99999997 589999999999999999999999 778998 799999999987 99999998 69999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC---CchhHHHHHHHHhhhhhhhhhhccc---CCCCccccccCC---CCCCCCCccHH
Q 043305 694 QFQLTVNVAALVINFVAAVSSGD---VPLNAVQLLWVNLIMDTLGALALAT---EPPTDHLMQRSP---VGRREPLITNI 764 (892)
Q Consensus 694 ~f~lt~Nv~~~~~~~~~~~~~~~---~pl~~vqlLwvnli~d~l~alaLa~---e~p~~~lm~r~P---~~r~~~li~~~ 764 (892)
+|.+++|++..+++|++.++.+. ..+..+-+..+|++++.+|.+++|. +-|.+.+++.|- .++....++..
T Consensus 938 ~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~ 1017 (1178)
T PLN03190 938 LYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK 1017 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH
Confidence 99999999999999999888665 4567888999999999999999964 334444444432 24567788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 043305 765 MWRNLLIQASYQVSVLLVLNFQ 786 (892)
Q Consensus 765 m~~~i~~~ai~q~~v~~~l~~~ 786 (892)
.+..|++.|+||.++++++.+.
T Consensus 1018 ~F~~w~~~~i~qs~iiff~~~~ 1039 (1178)
T PLN03190 1018 LFWLTMIDTLWQSAVVFFVPLF 1039 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 7778899999999988876543
No 17
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-68 Score=620.60 Aligned_cols=572 Identities=21% Similarity=0.304 Sum_probs=431.8
Q ss_pred HHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcc
Q 043305 265 IKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRK 344 (892)
Q Consensus 265 ~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~ 344 (892)
-.+++.++.++.+.||++||+++|+...++.+||.|+||+|-++..+...|+.+++|||||||||++.+.+-.+..-...
T Consensus 416 ~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~ 495 (1140)
T KOG0208|consen 416 KTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERN 495 (1140)
T ss_pred HHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccc
Confidence 35667788889999999999999999999999999999999999999999999999999999999999999887753221
Q ss_pred cCCCC-------CC----CCCC--H--HHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHH---c----C
Q 043305 345 MNPTD-------SN----SQLS--P--MVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMK---L----G 402 (892)
Q Consensus 345 ~~~~~-------~~----~~~~--~--~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~---~----g 402 (892)
.+..+ .. ..++ . ....-+..+++.||+... ......|||.|.-+.+...- - +
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~------v~g~l~GDPLdlkmfe~t~w~~ee~~~~~ 569 (1140)
T KOG0208|consen 496 VDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTL------VDGTLVGDPLDLKMFESTGWVYEEADIED 569 (1140)
T ss_pred ccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEE------eCCeeccCceeeeeeeccceEEEeccccc
Confidence 10000 00 0000 0 012235566777776433 12246789988877754320 0 0
Q ss_pred C-------------Ch-----hhhhc----ccceeeeeccccCCceeEEEEecC-CCcEEEEEcCceeeeeccccccccC
Q 043305 403 M-------------NF-----EAVRS----ECSVLHVFPFNSLKKRGGVAVQLP-NSEVHIHWKGAAEIVLDSCTGYIDT 459 (892)
Q Consensus 403 ~-------------~~-----~~~r~----~~~i~~~~pF~S~rK~msvvv~~~-~~~~~~~~KGA~e~IL~~C~~~~~~ 459 (892)
- +. +.-.+ ++.+++.+||+|.-+||||+++.+ +.+..+|+|||||.|.+.|+.-
T Consensus 570 ~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--- 646 (1140)
T KOG0208|consen 570 EATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--- 646 (1140)
T ss_pred hhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc---
Confidence 0 00 00000 467899999999999999999976 4678999999999999999741
Q ss_pred CCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHH
Q 043305 460 DDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRL 539 (892)
Q Consensus 460 ~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~ 539 (892)
.+ .+.+++.++.|+.+|+|+||+|+|.++...+.+. ....++..|+||+|+|++.|++++|++++.+|++
T Consensus 647 ---tv------P~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~-~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~e 716 (1140)
T KOG0208|consen 647 ---TV------PADYQEVLKEYTHQGFRVIALASKELETSTLQKA-QKLSRDTVESNLEFLGLIVMENKLKEETKRVIDE 716 (1140)
T ss_pred ---cC------CccHHHHHHHHHhCCeEEEEEecCccCcchHHHH-hhccHhhhhccceeeEEEEeecccccccHHHHHH
Confidence 22 3458889999999999999999999986522211 1234667899999999999999999999999999
Q ss_pred HHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC----------------------------------------------
Q 043305 540 CRIAGVKVRMVTGDNIQTARAIALECGILTSEAD---------------------------------------------- 573 (892)
Q Consensus 540 l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~---------------------------------------------- 573 (892)
|++|.||++|+||||..||..+||+|||+.+...
T Consensus 717 L~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d 796 (1140)
T KOG0208|consen 717 LNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLD 796 (1140)
T ss_pred HHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChh
Confidence 9999999999999999999999999999976431
Q ss_pred ----CCCCceecchhhhhc---CHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCC
Q 043305 574 ----ATEPNIIEGKSFRAL---SETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEAD 646 (892)
Q Consensus 574 ----~~~~~vi~G~~~~~l---~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~Ad 646 (892)
.+..++++|+.|+-+ ..+.+++++. +..||||++|.||..+|+.||+.|..|+|+|||+||+.|||+||
T Consensus 797 ~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~----~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAd 872 (1140)
T KOG0208|consen 797 VLSEKDYHLAMSGKTFQVILEHFPELVPKILL----KGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAAD 872 (1140)
T ss_pred hhccceeEEEecCchhHHHHhhcHHHHHHHHh----cCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcc
Confidence 012467889988765 4566777777 88999999999999999999999999999999999999999999
Q ss_pred eeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCCchhHHHH
Q 043305 647 IGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAA--VSSGDVPLNAVQL 724 (892)
Q Consensus 647 VGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~--~~~~~~pl~~vql 724 (892)
+|||++.+ .|.-||.+.-.-.+.+++.++|++||+....--..++|...+.+. +|++. +++...-++..|.
T Consensus 873 vGISLSea---EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~i----qFisv~~LY~~~~nl~D~Qf 945 (1140)
T KOG0208|consen 873 VGISLSEA---EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAI----QFISVVFLYLINSNLGDLQF 945 (1140)
T ss_pred cCcchhhh---hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHH----HHHhhheeeeecccccchhh
Confidence 99999733 355568888887789999999999999999888888888777655 44443 3456788999999
Q ss_pred HHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcccCCCC-cccc
Q 043305 725 LWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKR--ILNLESDS-NAHS 801 (892)
Q Consensus 725 Lwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~--~~~~~~~~-~~~~ 801 (892)
|+++++..+..|++++..+|.+.|-..|| ...|+++......++|.++..++.+++++.+.. ++..+... ..+-
T Consensus 946 l~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt 1022 (1140)
T KOG0208|consen 946 LFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNT 1022 (1140)
T ss_pred hhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCccc
Confidence 99999999999999999999999988877 456888888888888877776666665554322 11111100 1223
Q ss_pred cccchhHHHHHHHHHHHhhhhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHH--HH--H-hhhccccccCCh
Q 043305 802 NKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILI--IQ--F-LGKFASTTRLNW 871 (892)
Q Consensus 802 ~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~--v~--~-~~~~f~~~~L~~ 871 (892)
....+|.+|..-.|..+++.+-.-+ ..++.+.+|+|+.|...+......-+.+ +. + ..+.+..++.+-
T Consensus 1023 ~s~~~T~lF~vS~fqYi~~a~v~S~--g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~ 1095 (1140)
T KOG0208|consen 1023 QSSDNTSLFFVSSFQYIFIALVLSK--GSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPT 1095 (1140)
T ss_pred ccceeeEeeehhHHHHHHhheeecc--CCcccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCc
Confidence 3556788898888888888765433 3445567889988875544333322222 21 1 124566666655
No 18
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5.7e-67 Score=619.93 Aligned_cols=343 Identities=23% Similarity=0.344 Sum_probs=291.0
Q ss_pred HHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCccc
Q 043305 266 KILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKM 345 (892)
Q Consensus 266 ~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~ 345 (892)
..+.++++++|++|||+||+++|++++.|++||+|+|+++|+++++|++|++|+||+|||||||+|++.++++...+.
T Consensus 247 ~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~-- 324 (673)
T PRK14010 247 LSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS-- 324 (673)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC--
Confidence 456788889999999999999999999999999999999999999999999999999999999997776666542110
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCc
Q 043305 346 NPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKK 425 (892)
Q Consensus 346 ~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK 425 (892)
....+++..+..++.. ..||+++|+++++.+.+++....+ .+.+||++++|
T Consensus 325 ----------~~~~~ll~~a~~~~~~--------------s~~P~~~AIv~~a~~~~~~~~~~~-----~~~~pF~~~~k 375 (673)
T PRK14010 325 ----------SSFERLVKAAYESSIA--------------DDTPEGRSIVKLAYKQHIDLPQEV-----GEYIPFTAETR 375 (673)
T ss_pred ----------ccHHHHHHHHHHhcCC--------------CCChHHHHHHHHHHHcCCCchhhh-----cceeccccccc
Confidence 0112333333333321 249999999999998776543222 23579999999
Q ss_pred eeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchh
Q 043305 426 RGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE 505 (892)
Q Consensus 426 ~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~ 505 (892)
+|++.++ ++ .+.|||+|.++++|+. +|...+. .+.+.+++++++|+|+++++.
T Consensus 376 ~~gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~~------------ 428 (673)
T PRK14010 376 MSGVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVLE------------ 428 (673)
T ss_pred eeEEEEC---CE--EEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEEE------------
Confidence 9999753 22 4569999999999974 2222221 256677889999999998762
Q ss_pred hhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh
Q 043305 506 ELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF 585 (892)
Q Consensus 506 ~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 585 (892)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.
T Consensus 429 ----------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~----------------- 481 (673)
T PRK14010 429 ----------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD----------------- 481 (673)
T ss_pred ----------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-----------------
Confidence 56899999999999999999999999999999999999999999999999995
Q ss_pred hhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE
Q 043305 586 RALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI 665 (892)
Q Consensus 586 ~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi 665 (892)
.++||++|+||.++|+.+|++|++|||||||+||+|||++|||||||| +|||+|||+||+
T Consensus 482 -------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 541 (673)
T PRK14010 482 -------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANL 541 (673)
T ss_pred -------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCE
Confidence 389999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043305 666 IILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVS 713 (892)
Q Consensus 666 il~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~ 713 (892)
|++||||++|++++++||++|+|++|++.|.++.|+..++..+.+.+.
T Consensus 542 VLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 542 IDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887766654443
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.6e-64 Score=599.48 Aligned_cols=333 Identities=27% Similarity=0.398 Sum_probs=285.2
Q ss_pred HHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccC
Q 043305 267 ILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMN 346 (892)
Q Consensus 267 ~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~ 346 (892)
.+.++++++|++|||+|+.++++++..|++||+|+|+++|+++++|+||++|+||+|||||||+|+|++++++..+.
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~--- 324 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG--- 324 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC---
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999874221
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHH-cCCChhhhhcccceeeeeccccCCc
Q 043305 347 PTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMK-LGMNFEAVRSECSVLHVFPFNSLKK 425 (892)
Q Consensus 347 ~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~-~g~~~~~~r~~~~i~~~~pF~S~rK 425 (892)
.+++ +++ ..++.++.. ..||..+||++++.+ .+.+. .+..++..+.+||++.+|
T Consensus 325 -------~~~~--~ll-~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--~~~~~~~~~~~pF~s~~~ 379 (679)
T PRK01122 325 -------VTEE--ELA-DAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--RDLQSLHATFVPFSAQTR 379 (679)
T ss_pred -------CCHH--HHH-HHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--hhhccccceeEeecCcCc
Confidence 1111 222 333333221 237889999999986 34332 222356778899999999
Q ss_pred eeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchh
Q 043305 426 RGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE 505 (892)
Q Consensus 426 ~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~ 505 (892)
+|++.+. + +.+.|||+|.+++.|.. +|... .+++.+.+++++++|+|++++|+
T Consensus 380 ~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------------ 432 (679)
T PRK01122 380 MSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------------ 432 (679)
T ss_pred eEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE------------
Confidence 9988653 3 57899999999999953 23211 24577788999999999999994
Q ss_pred hhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh
Q 043305 506 ELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF 585 (892)
Q Consensus 506 ~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 585 (892)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++|||.
T Consensus 433 ----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId----------------- 485 (679)
T PRK01122 433 ----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD----------------- 485 (679)
T ss_pred ----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-----------------
Confidence 45799999999999999999999999999999999999999999999999995
Q ss_pred hhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE
Q 043305 586 RALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI 665 (892)
Q Consensus 586 ~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi 665 (892)
.++||++|+||.++|+.+|++|++|||||||+||+|||++|||||||| +|||+|||+||+
T Consensus 486 -------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 545 (679)
T PRK01122 486 -------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNM 545 (679)
T ss_pred -------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCE
Confidence 389999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 666 IILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVA 702 (892)
Q Consensus 666 il~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~ 702 (892)
|++||||++|+++++|||++.-.--..-.|++. |-+
T Consensus 546 VLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~-n~~ 581 (679)
T PRK01122 546 VDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA-NDV 581 (679)
T ss_pred EEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH-HHH
Confidence 999999999999999999999777777888877 444
No 20
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.8e-66 Score=628.54 Aligned_cols=569 Identities=22% Similarity=0.288 Sum_probs=441.8
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHH
Q 043305 188 PRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKI 267 (892)
Q Consensus 188 ~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (892)
|+.|+....+.+-....-...+++..|.+.+++.+++.. ++.. . .+..++.... +........
T Consensus 265 ~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~--------~~~~-~----~~~~~~~~~~----~~~~~~~~~ 327 (1151)
T KOG0206|consen 265 PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTR--------QDGR-H----NGEWWYLSPS----EAAYAGFVH 327 (1151)
T ss_pred CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeee--------eccc-c----cCchhhhcCc----hHHHHHHHH
Confidence 566666777777677777777777888888887777642 0000 0 0000011000 012234556
Q ss_pred HHHHHHHhhhcccCCchhHHHHHHHHHH------HHHHhC----CceeeccccccccCceeEEEeCCCCCcccCceEEEE
Q 043305 268 LTVAVTIVVVAVPEGLPLAVTLTLAYSM------RKMMAD----KALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE 337 (892)
Q Consensus 268 ~~~avtilvvavPegLplavtl~la~~~------~~m~k~----~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~ 337 (892)
|..++.+....||-+|...+.+.-.+.. ..|..+ .+.+|..+..|.||++++|.+|||||||+|.|++.+
T Consensus 328 f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~k 407 (1151)
T KOG0206|consen 328 FLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKK 407 (1151)
T ss_pred HHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeec
Confidence 7778888999999999988777655544 334433 577999999999999999999999999999999999
Q ss_pred EEeCCcccCCCCC--------CC-----------------C---------CCHHHHHHHHHHHHhcCCCccccCCCC-CC
Q 043305 338 AYVGGRKMNPTDS--------NS-----------------Q---------LSPMVTSLLVEGIAQNTTGSVYLPPNG-GE 382 (892)
Q Consensus 338 ~~~~~~~~~~~~~--------~~-----------------~---------~~~~~~~ll~~~i~~n~~~~~~~~~~~-~~ 382 (892)
+.++|..|..... .+ . ..+.....+..+.++||+......+++ ..
T Consensus 408 Csi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~ 487 (1151)
T KOG0206|consen 408 CSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKL 487 (1151)
T ss_pred ccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccce
Confidence 9999877653210 00 0 111223455667888888654332222 34
Q ss_pred ccccCChHHHHHHHHHHHcCCChhhh------------hcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeee
Q 043305 383 AEVSGSPTEKAILQWGMKLGMNFEAV------------RSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVL 450 (892)
Q Consensus 383 ~~~~g~ptE~ALl~~a~~~g~~~~~~------------r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL 450 (892)
.+...+|+|.|+++.|++.|+.+-.. ..+++++++.+|||.||||||+||.++|++++|||||+.+|.
T Consensus 488 ~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~ 567 (1151)
T KOG0206|consen 488 SYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIF 567 (1151)
T ss_pred eeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhH
Confidence 56778999999999999999865332 237899999999999999999999999999999999999999
Q ss_pred ccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh----------------hhhccCCC
Q 043305 451 DSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE----------------LSRWALPE 514 (892)
Q Consensus 451 ~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~----------------~~~~~~~e 514 (892)
+++.. -.+..+++..++++++|.+||||||+|||+++++++..... .+..+.+|
T Consensus 568 erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iE 637 (1151)
T KOG0206|consen 568 ERLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIE 637 (1151)
T ss_pred hhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHH
Confidence 99975 12345667788999999999999999999998766543111 12245689
Q ss_pred CCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC---------------------
Q 043305 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD--------------------- 573 (892)
Q Consensus 515 ~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~--------------------- 573 (892)
+||+++|..+|||++++||+++|+.|++||||+||+|||..+||.+||..|+++.++..
T Consensus 638 k~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~ 717 (1151)
T KOG0206|consen 638 KDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAAL 717 (1151)
T ss_pred hcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999986432
Q ss_pred ---------------------CCCCceecchhhhhcCHHHHHHHhcc--cccceEEEeccCHhhHHHHHHHHHHc-CCeE
Q 043305 574 ---------------------ATEPNIIEGKSFRALSETQREEIAGE--DFGMICVMGRSSPSDKLLLVQALRKR-GDVV 629 (892)
Q Consensus 574 ---------------------~~~~~vi~G~~~~~l~~~e~~~i~~~--~~~~~~V~aR~sP~dK~~lV~~Lq~~-g~vV 629 (892)
...+++++|+.+...-+++.+..+.+ .-|+..++||+||.||..+|+..++. +.++
T Consensus 718 ~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~T 797 (1151)
T KOG0206|consen 718 KETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVT 797 (1151)
T ss_pred HHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceE
Confidence 13568889988876433322222221 24688999999999999999999854 8999
Q ss_pred EEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 630 AVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV-RWGRSVYANIQKFIQFQLTVNVAALVINF 708 (892)
Q Consensus 630 a~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i-~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~ 708 (892)
+++|||+||.+|+++|||||.++..+-..|..+||+.|.. |+.+.+++ .|||+.|.|+.|++.|.+++|+...++.|
T Consensus 798 LAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~f 875 (1151)
T KOG0206|consen 798 LAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLF 875 (1151)
T ss_pred EEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999966544445699999999998 99999997 89999999999999999999999999999
Q ss_pred HHHHhc---CCCchhHHHHHHHHhhhhhhhhhhccc--CCCCccccccCCC----CCCCCCccHHHHHHHHHHHHHHHHH
Q 043305 709 VAAVSS---GDVPLNAVQLLWVNLIMDTLGALALAT--EPPTDHLMQRSPV----GRREPLITNIMWRNLLIQASYQVSV 779 (892)
Q Consensus 709 ~~~~~~---~~~pl~~vqlLwvnli~d~l~alaLa~--e~p~~~lm~r~P~----~r~~~li~~~m~~~i~~~ai~q~~v 779 (892)
.+.++. +...+..+++..+|+++..+|.++||. ...+.+.+.+.|. ++..-++++.-++.++..++||.++
T Consensus 876 wy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli 955 (1151)
T KOG0206|consen 876 WYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLV 955 (1151)
T ss_pred HhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhhee
Confidence 998875 457889999999999999999999985 3334444445552 4555677877777888999999998
Q ss_pred HHHHHH
Q 043305 780 LLVLNF 785 (892)
Q Consensus 780 ~~~l~~ 785 (892)
+|++.+
T Consensus 956 ~Ff~~~ 961 (1151)
T KOG0206|consen 956 IFFLPY 961 (1151)
T ss_pred eeeeeH
Confidence 887644
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=3.6e-60 Score=561.25 Aligned_cols=337 Identities=26% Similarity=0.406 Sum_probs=286.8
Q ss_pred HHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccC
Q 043305 267 ILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMN 346 (892)
Q Consensus 267 ~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~ 346 (892)
.+.++++++|++|||+|+...+.....|++||+|+|+++|++++||+||++|+||||||||||+|+|+|++++..+.
T Consensus 249 ~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~--- 325 (675)
T TIGR01497 249 SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG--- 325 (675)
T ss_pred HHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC---
Confidence 36677999999999988777777777899999999999999999999999999999999999999999999874211
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCce
Q 043305 347 PTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKR 426 (892)
Q Consensus 347 ~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~ 426 (892)
.++ .+++ ..++.++.. ..||+++||++++.+.|.+.... .++..+..||++.+|+
T Consensus 326 -------~~~--~~ll-~~aa~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~~~--~~~~~~~~pf~~~~~~ 380 (675)
T TIGR01497 326 -------VDE--KTLA-DAAQLASLA-------------DDTPEGKSIVILAKQLGIREDDV--QSLHATFVEFTAQTRM 380 (675)
T ss_pred -------CcH--HHHH-HHHHHhcCC-------------CCCcHHHHHHHHHHHcCCCcccc--ccccceEEEEcCCCcE
Confidence 111 1222 233333221 25899999999999877654322 2355678999999888
Q ss_pred eEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh
Q 043305 427 GGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE 506 (892)
Q Consensus 427 msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~ 506 (892)
|++.+. ++ +.++||++|.+++.|.. +|... .+.+.+.+++++++|+|++++|+
T Consensus 381 sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~------~~~~~~~~~~~a~~G~r~l~va~------------- 433 (675)
T TIGR01497 381 SGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHI------PTDLDQAVDQVARQGGTPLVVCE------------- 433 (675)
T ss_pred EEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCC------cHHHHHHHHHHHhCCCeEEEEEE-------------
Confidence 887543 33 56899999999988852 22221 23567788999999999999995
Q ss_pred hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhh
Q 043305 507 LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFR 586 (892)
Q Consensus 507 ~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~ 586 (892)
|.+++|+++++||+|||++++|++||++||+++|+||||..||.++|+++||.
T Consensus 434 ---------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~------------------ 486 (675)
T TIGR01497 434 ---------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD------------------ 486 (675)
T ss_pred ---------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------
Confidence 24799999999999999999999999999999999999999999999999995
Q ss_pred hcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEE
Q 043305 587 ALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDII 666 (892)
Q Consensus 587 ~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDii 666 (892)
.++||++|+||..+|+.+|++|+.|+|+|||+||+|||++|||||||| +|+++||++||++
T Consensus 487 ------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadiv 547 (675)
T TIGR01497 487 ------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMV 547 (675)
T ss_pred ------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEE
Confidence 378999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 667 ILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAAL 704 (892)
Q Consensus 667 l~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~ 704 (892)
++||||++|+++++|||+++-+...+..|++..+++-.
T Consensus 548 Lldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 548 DLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 99999999999999999999999999999998877643
No 22
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-61 Score=535.40 Aligned_cols=578 Identities=23% Similarity=0.306 Sum_probs=432.5
Q ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCC----ceeeccccccccCceeEEEeCCCCCcccCceEEEEEE
Q 043305 264 AIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK----ALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAY 339 (892)
Q Consensus 264 ~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~----~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~ 339 (892)
|-.+++..+-+.-..||-.|-.-+-++-.+-.+.+.+|. .+||....-|+||++.++.+|||||||+|+|.++++.
T Consensus 350 wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiH 429 (1051)
T KOG0210|consen 350 WYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIH 429 (1051)
T ss_pred hHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeee
Confidence 445556666677777999999999999888888888875 5699999999999999999999999999999999999
Q ss_pred eCCcccCCC----------------CC---------CCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHH
Q 043305 340 VGGRKMNPT----------------DS---------NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAI 394 (892)
Q Consensus 340 ~~~~~~~~~----------------~~---------~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~AL 394 (892)
+|...|..+ .. ..+++..+.++ ..+++.||+.....++++...++..+|+|.||
T Consensus 430 LGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~-V~alalCHNVTPv~e~~ge~sYQAaSPDEVAi 508 (1051)
T KOG0210|consen 430 LGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNA-VLALALCHNVTPVFEDDGEVSYQAASPDEVAI 508 (1051)
T ss_pred eeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHH-HHHHHHhccCCcccCCCceEEeecCCCCeEEE
Confidence 875443211 00 12233334443 34556666555555555556778899999999
Q ss_pred HHHHHHcCCChhhh-------------hcccceeeeeccccCCceeEEEEecC-CCcEEEEEcCceeeeeccccccccCC
Q 043305 395 LQWGMKLGMNFEAV-------------RSECSVLHVFPFNSLKKRGGVAVQLP-NSEVHIHWKGAAEIVLDSCTGYIDTD 460 (892)
Q Consensus 395 l~~a~~~g~~~~~~-------------r~~~~i~~~~pF~S~rK~msvvv~~~-~~~~~~~~KGA~e~IL~~C~~~~~~~ 460 (892)
++|....|+..... ..+|+|+++|||+|+.|||+++|+.+ .+++..|.|||.-++-...+.
T Consensus 509 VkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----- 583 (1051)
T KOG0210|consen 509 VKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----- 583 (1051)
T ss_pred EEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc-----
Confidence 99999888754322 12799999999999999999999987 678999999998877554321
Q ss_pred CcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhh---------------hh--hccCCCCCcEEEEEE
Q 043305 461 DRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEE---------------LS--RWALPEDDLVLLAIV 523 (892)
Q Consensus 461 g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~---------------~~--~~~~~e~~l~~lGlv 523 (892)
-+.+++....||++||||+.+|.|.++.+++...+. .. ....+|+||.++|+.
T Consensus 584 ----------NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LT 653 (1051)
T KOG0210|consen 584 ----------NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLT 653 (1051)
T ss_pred ----------chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhccc
Confidence 246778889999999999999999998665432211 00 012578999999999
Q ss_pred EecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-----------------------CCCCcee
Q 043305 524 GIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD-----------------------ATEPNII 580 (892)
Q Consensus 524 gi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-----------------------~~~~~vi 580 (892)
|.||.++++|+.+++.||+|||+|||+|||..+||..||+..++...+.. .+.+++|
T Consensus 654 GVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi 733 (1051)
T KOG0210|consen 654 GVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVI 733 (1051)
T ss_pred ChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEE
Confidence 99999999999999999999999999999999999999999999976542 3457899
Q ss_pred cchhhh---hcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHc-CCeEEEeCCCCCChHhhhcCCeeEeecCCCc
Q 043305 581 EGKSFR---ALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPALHEADIGLAMGIQGT 656 (892)
Q Consensus 581 ~G~~~~---~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~-g~vVa~tGDG~NDapALk~AdVGIAmgi~gt 656 (892)
+|+.+. ++-++|+.++..+. ...|+|||+|+||+++++.||++ |..|+++|||-||..|+++||+||.+-....
T Consensus 734 ~G~Sl~~cl~yye~Ef~el~~~~--~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEG 811 (1051)
T KOG0210|consen 734 DGESLEFCLKYYEDEFIELVCEL--PAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEG 811 (1051)
T ss_pred cCchHHHHHHHHHHHHHHHHHhc--CcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccc
Confidence 998775 34567777766533 67899999999999999999986 8999999999999999999999995432333
Q ss_pred HhhhhcccEEEcCCCchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHH---HHHHHhhhh
Q 043305 657 EVAKESSDIIILDDNFASVVKVVR-WGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQ---LLWVNLIMD 732 (892)
Q Consensus 657 ~vAkeaaDiil~ddnf~sIv~~i~-~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vq---lLwvnli~d 732 (892)
..|.-|||+.|.+ |+.+-+++. +||+.|.+-.|.-||.+...+...+++.+++....+.|..-.| |.-+..+.+
T Consensus 812 kQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YT 889 (1051)
T KOG0210|consen 812 KQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYT 889 (1051)
T ss_pred cccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHH
Confidence 4588899999998 999999985 5999999999999999999998888888887777666666555 445677788
Q ss_pred hhhhhhcccCCCC-ccccccCCC----CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCcccccccchh
Q 043305 733 TLGALALATEPPT-DHLMQRSPV----GRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNT 807 (892)
Q Consensus 733 ~l~alaLa~e~p~-~~lm~r~P~----~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~~~~~~~~~~~~T 807 (892)
.+|.++|..+.-- +++-...|. -.++..++.+.+..|+..++||..++.+..+. ++. .......+
T Consensus 890 mlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~---l~~-------~ef~~iva 959 (1051)
T KOG0210|consen 890 MLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALL---LFD-------TEFIHIVA 959 (1051)
T ss_pred HhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHH---Hhh-------hhheEeee
Confidence 8999999875432 222222331 12233344444555577899998887654221 111 11233456
Q ss_pred HHHHHHHHHHHhhh-hcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcccccc-CChHHHHHHHHHHH
Q 043305 808 LIFNSFVLCQIFNE-FNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTR-LNWKHWIISVVIGF 882 (892)
Q Consensus 808 ~~F~~fV~~qvfn~-~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v~~~~~~f~~~~-L~~~~w~~~i~~~~ 882 (892)
+.|.++++..+... +..+ ..+|..+..-++++.+.++.+++++.+|+..- ++|.+.+...++.+
T Consensus 960 isFtaLi~tELiMVaLtv~-----------tw~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~ 1025 (1051)
T KOG0210|consen 960 ISFTALILTELIMVALTVR-----------TWHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITL 1025 (1051)
T ss_pred eeeHHHHHHHHHHHhhhhh-----------hhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776655432 2222 23566666777888888888999999887654 44443333333333
No 23
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-57 Score=504.26 Aligned_cols=395 Identities=25% Similarity=0.430 Sum_probs=315.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEE----EEeCCcccCCCCCCCCC
Q 043305 279 VPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE----AYVGGRKMNPTDSNSQL 354 (892)
Q Consensus 279 vPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~----~~~~~~~~~~~~~~~~~ 354 (892)
||-|||..+|.++|.|..+|+++|++++++.|+|.|+.++++|||||||||.|+++|.+ ++..| .
T Consensus 289 iPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g-----------v 357 (942)
T KOG0205|consen 289 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG-----------V 357 (942)
T ss_pred cccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC-----------C
Confidence 99999999999999999999999999999999999999999999999999999999987 33322 2
Q ss_pred CHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEEecC
Q 043305 355 SPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLP 434 (892)
Q Consensus 355 ~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~ 434 (892)
+++.. +|..+.+. .+ + + -|..|.|+++.... .++.|..++.++..|||+..||-+..+..+
T Consensus 358 ~~D~~-~L~A~rAs----r~---e--n-----~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~d~ 418 (942)
T KOG0205|consen 358 DKDDV-LLTAARAS----RK---E--N-----QDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYIDP 418 (942)
T ss_pred ChHHH-HHHHHHHh----hh---c--C-----hhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEECC
Confidence 22222 22222221 11 1 1 36789999886543 578889999999999999999999999999
Q ss_pred CCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCC
Q 043305 435 NSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPE 514 (892)
Q Consensus 435 ~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e 514 (892)
+|+.+..+|||||.|++.|.. +.+.++.+.+.+++||++|+|.+++||+..++.. .+...
T Consensus 419 dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~---------~~~~g 478 (942)
T KOG0205|consen 419 DGNWHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKT---------KESPG 478 (942)
T ss_pred CCCEEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhcccccc---------ccCCC
Confidence 999999999999999999963 3455778999999999999999999998876431 12234
Q ss_pred CCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh-hhcCHHHH
Q 043305 515 DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF-RALSETQR 593 (892)
Q Consensus 515 ~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~-~~l~~~e~ 593 (892)
....|+|+.-+-||+|.+..++|+....-|++|.|+|||...-++..++++|+-++-.... .+-|.+- ..+...+.
T Consensus 479 ~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss---~llG~~~~~~~~~~~v 555 (942)
T KOG0205|consen 479 GPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS---ALLGLGKDGSMPGSPV 555 (942)
T ss_pred CCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCch---hhccCCCCCCCCCCcH
Confidence 5578999999999999999999999999999999999999999999999999865422110 1111110 11222234
Q ss_pred HHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCch
Q 043305 594 EEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFA 673 (892)
Q Consensus 594 ~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~ 673 (892)
++.+. +..-||-+.|++|+.+|+.||++|+.|+|||||+||+||||+||+|||+. ..|+.|+.+||||+++..++
T Consensus 556 ~elie----~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglS 630 (942)
T KOG0205|consen 556 DELIE----KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 630 (942)
T ss_pred HHHhh----hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCch
Confidence 44555 66789999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhh
Q 043305 674 SVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMD 732 (892)
Q Consensus 674 sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d 732 (892)
-|+.++..+|.+|.+++.+..|.++..+-.+ +.|.....-...-++|...+.+-++-|
T Consensus 631 viI~avltSraIfqrmknytiyavsitiriv-~gfml~alIw~~df~pfmvliiailnd 688 (942)
T KOG0205|consen 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSPFMVLIIAILND 688 (942)
T ss_pred hhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCHHHHHHHHHhcC
Confidence 9999999999999999999888877655433 222222222334455555555554444
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=9.2e-54 Score=502.32 Aligned_cols=322 Identities=42% Similarity=0.664 Sum_probs=287.4
Q ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCc
Q 043305 264 AIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR 343 (892)
Q Consensus 264 ~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~ 343 (892)
+...+..++++++++|||+||++++++++++..+|+++|+++|+++++|+||++++||||||||||+|+|+|++++..+.
T Consensus 177 ~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~ 256 (499)
T TIGR01494 177 IFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG 256 (499)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccC
Q 043305 344 KMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSL 423 (892)
Q Consensus 344 ~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~ 423 (892)
.+.++||.|.|+++++++. .++..||++.
T Consensus 257 ---------------------------------------~~~s~hp~~~ai~~~~~~~------------~~~~~~f~~~ 285 (499)
T TIGR01494 257 ---------------------------------------EYLSGHPDERALVKSAKWK------------ILNVFEFSSV 285 (499)
T ss_pred ---------------------------------------CcCCCChHHHHHHHHhhhc------------CcceeccCCC
Confidence 0125799999999998652 1356899999
Q ss_pred CceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCc
Q 043305 424 KKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPD 503 (892)
Q Consensus 424 rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~ 503 (892)
+|+|+++++.+++ .++||+++.+++.|.. +.+.+++++.+|+|++++||+.
T Consensus 286 ~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------------~~~~~~~~~~~g~~~~~~a~~~-------- 336 (499)
T TIGR01494 286 RKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------------LEEKVKELAQSGLRVLAVASKE-------- 336 (499)
T ss_pred CceEEEEEecCCc---EEEeCCHHHHHHhhHH------------------HHHHHHHHHhCCCEEEEEEECC--------
Confidence 9999999885333 3789999999988852 2234456788999999999742
Q ss_pred hhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch
Q 043305 504 EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK 583 (892)
Q Consensus 504 ~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~ 583 (892)
+++|+++++|++|++++++|+.|+++|++++|+|||+..||..+|+++||
T Consensus 337 --------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------- 386 (499)
T TIGR01494 337 --------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------- 386 (499)
T ss_pred --------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc----------------
Confidence 58999999999999999999999999999999999999999999999986
Q ss_pred hhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcc
Q 043305 584 SFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESS 663 (892)
Q Consensus 584 ~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaa 663 (892)
++|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| |+++|
T Consensus 387 -----------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~a 437 (499)
T TIGR01494 387 -----------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAA 437 (499)
T ss_pred -----------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhC
Confidence 3678999999999999999999999999999999999999999997 79999
Q ss_pred cEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhh
Q 043305 664 DIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALA 738 (892)
Q Consensus 664 Diil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~ala 738 (892)
|+++++|++..+..++++||+++.+|++++.|.+++|++.+.+.+.+.+ +|+++|+.++++
T Consensus 438 divl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~--------------~~~~~~~~~~~~ 498 (499)
T TIGR01494 438 DIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV--------------LNLVPPGLAALA 498 (499)
T ss_pred CeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHhcchhhhc
Confidence 9999999999999999999999999999999999999997777665431 888888887765
No 25
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-53 Score=479.79 Aligned_cols=560 Identities=20% Similarity=0.245 Sum_probs=395.4
Q ss_pred HHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCCC
Q 043305 273 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSNS 352 (892)
Q Consensus 273 tilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~~ 352 (892)
-|+...||+.||+-+++|.--+...++|.+++|..+-.+--.|++++.|||||||||+..|.|..+--....-....+.+
T Consensus 435 LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s 514 (1160)
T KOG0209|consen 435 LILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPAS 514 (1160)
T ss_pred EEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchh
Confidence 35666799999999999999999999999999999999999999999999999999999999987653111110111222
Q ss_pred CCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHH-cC-CChhhhh----cccceeeeeccccCCce
Q 043305 353 QLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMK-LG-MNFEAVR----SECSVLHVFPFNSLKKR 426 (892)
Q Consensus 353 ~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~-~g-~~~~~~r----~~~~i~~~~pF~S~rK~ 426 (892)
..+.+..+ .+++||+.-. .++ ..+|||.|+|.+++... +. .+...-| ...+|.+.+.|+|+-||
T Consensus 515 ~~p~~t~~----vlAscHsLv~-le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKR 584 (1160)
T KOG0209|consen 515 KAPNETVL----VLASCHSLVL-LED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKR 584 (1160)
T ss_pred hCCchHHH----HHHHHHHHHH-hcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHH
Confidence 23333322 3455555322 111 27899999999987521 10 0100111 14678999999999999
Q ss_pred eEEEEecCC----CcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCC
Q 043305 427 GGVAVQLPN----SEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIP 502 (892)
Q Consensus 427 msvvv~~~~----~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~ 502 (892)
|+|++...+ -++.+.+|||||.|-++-+. ..+.+.++..+++++|.||||++||++..-...
T Consensus 585 msvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~ 650 (1160)
T KOG0209|consen 585 MSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS 650 (1160)
T ss_pred HHhhhhcccCCCceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchh
Confidence 999987543 25889999999999776542 234577888999999999999999999732111
Q ss_pred chhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcC----------
Q 043305 503 DEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEA---------- 572 (892)
Q Consensus 503 ~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~---------- 572 (892)
+....+++..|+||+|.|++.+.-|+|++++++|+.+++++.+|+||||||+.||.++|+++||.....
T Consensus 651 -q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~ 729 (1160)
T KOG0209|consen 651 -QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGD 729 (1160)
T ss_pred -hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCC
Confidence 111234667899999999999999999999999999999999999999999999999999999975410
Q ss_pred C--------------------------CCCCceecchhhhhcCH-HHHHHHhcccccceEEEeccCHhhHHHHHHHHHHc
Q 043305 573 D--------------------------ATEPNIIEGKSFRALSE-TQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR 625 (892)
Q Consensus 573 ~--------------------------~~~~~vi~G~~~~~l~~-~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~ 625 (892)
. ..+.++++|..+..+.. +++.++++ ++.||||++|.||..++..|++.
T Consensus 730 ~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~----hv~VfARvaP~QKE~ii~tlK~~ 805 (1160)
T KOG0209|consen 730 GNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP----HVWVFARVAPKQKEFIITTLKKL 805 (1160)
T ss_pred CceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh----heeEEEeeChhhHHHHHHHHHhc
Confidence 0 12346778888887654 46788888 99999999999999999999999
Q ss_pred CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHh-----------------------------------------------
Q 043305 626 GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV----------------------------------------------- 658 (892)
Q Consensus 626 g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~v----------------------------------------------- 658 (892)
|++++|+|||+||..|||+||||||+- ++++.
T Consensus 806 Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 884 (1160)
T KOG0209|consen 806 GYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKT 884 (1160)
T ss_pred CeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHH
Confidence 999999999999999999999999984 22210
Q ss_pred ------------------------hhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043305 659 ------------------------AKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSS 714 (892)
Q Consensus 659 ------------------------AkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~ 714 (892)
|.-||.+.-.-.+.++|-+.|+.|||..-+.-+..... .-|.. +....++.++.
T Consensus 885 ~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKIL-ALN~L-isAYslSvlyl 962 (1160)
T KOG0209|consen 885 RERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKIL-ALNCL-ISAYSLSVLYL 962 (1160)
T ss_pred HHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHH-HHHHH-HHHHHHHHhhh
Confidence 00122222223367889999999999987654333221 12211 11122334445
Q ss_pred CCCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q 043305 715 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLE 794 (892)
Q Consensus 715 ~~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~ 794 (892)
...-++..|...--+++- ..-+.+...+|-+.|.+..|. .++++......++.|-..++..++++.-.... ..-+
T Consensus 963 dGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~-~~p~ 1037 (1160)
T KOG0209|consen 963 DGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYK-LEPP 1037 (1160)
T ss_pred cCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHh-cCCc
Confidence 567788888776655543 345566678899999988885 45777776666777766666555444322111 1111
Q ss_pred CC----CcccccccchhHHHHHHHHHHHhh-hhcccCCCCcccccCCcchHHHHHHHHHHHHHHHHHH----HHhhhccc
Q 043305 795 SD----SNAHSNKVKNTLIFNSFVLCQIFN-EFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILII----QFLGKFAS 865 (892)
Q Consensus 795 ~~----~~~~~~~~~~T~~F~~fV~~qvfn-~~n~R~~~~~~~f~~~~~N~~f~~~i~~~~~~qi~~v----~~~~~~f~ 865 (892)
.. .....+...+|.+|..-...|+.. .+|-+ ..++.+.+..|+.++..++++..+-+.++ +=++..|.
T Consensus 1038 ~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~---G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~ 1114 (1160)
T KOG0209|consen 1038 EEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQ---GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFE 1114 (1160)
T ss_pred ccccChhcccChhhhhhHHHHHHHHHHHHHhhhhcc---CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhhee
Confidence 00 112345667888888777778765 45554 34666788889877766555444333332 33677888
Q ss_pred cccCChH
Q 043305 866 TTRLNWK 872 (892)
Q Consensus 866 ~~~L~~~ 872 (892)
.++++-.
T Consensus 1115 lV~mp~~ 1121 (1160)
T KOG0209|consen 1115 LVDMPQD 1121 (1160)
T ss_pred eecccHH
Confidence 9888744
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-52 Score=491.56 Aligned_cols=371 Identities=29% Similarity=0.377 Sum_probs=294.1
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHH
Q 043305 190 KKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILT 269 (892)
Q Consensus 190 ~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (892)
...|+-.+-+.+.+......+-++.|+++++++... +. ..+...+.
T Consensus 312 q~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~-------------~~---------------------~~~~~a~~ 357 (713)
T COG2217 312 QSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLF-------------GG---------------------GDWETALY 357 (713)
T ss_pred hhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHh-------------cC---------------------CcHHHHHH
Confidence 345666778888888877775666666666643211 00 12667899
Q ss_pred HHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCC
Q 043305 270 VAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTD 349 (892)
Q Consensus 270 ~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~ 349 (892)
.+++++|++|||+|.+++++++..++.+.+++|+|+|+..++|+++++++|+||||||||+|+|+|+++...+. +
T Consensus 358 ~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--- 432 (713)
T COG2217 358 RALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--- 432 (713)
T ss_pred HHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876432 1
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEE
Q 043305 350 SNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGV 429 (892)
Q Consensus 350 ~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msv 429 (892)
.++++. .+.+.. ..+.||...||++++.+.|.. .. + +|.+.
T Consensus 433 -----e~~~L~---laAalE--------------~~S~HPiA~AIv~~a~~~~~~--~~----~-----~~~~i------ 473 (713)
T COG2217 433 -----EDELLA---LAAALE--------------QHSEHPLAKAIVKAAAERGLP--DV----E-----DFEEI------ 473 (713)
T ss_pred -----HHHHHH---HHHHHH--------------hcCCChHHHHHHHHHHhcCCC--Cc----c-----ceeee------
Confidence 122332 222221 225799999999998876621 10 1 12111
Q ss_pred EEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhh
Q 043305 430 AVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSR 509 (892)
Q Consensus 430 vv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~ 509 (892)
++.++...+.| +.++-...+++..++.. .+. ..+..+.+.++|..++.++.
T Consensus 474 ----~G~Gv~~~v~g--~~v~vG~~~~~~~~~~~--~~~-----~~~~~~~~~~~G~t~v~va~---------------- 524 (713)
T COG2217 474 ----PGRGVEAEVDG--ERVLVGNARLLGEEGID--LPL-----LSERIEALESEGKTVVFVAV---------------- 524 (713)
T ss_pred ----ccCcEEEEECC--EEEEEcCHHHHhhcCCC--ccc-----hhhhHHHHHhcCCeEEEEEE----------------
Confidence 22233333333 11111112232222211 111 45567788889988888874
Q ss_pred ccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcC
Q 043305 510 WALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALS 589 (892)
Q Consensus 510 ~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~ 589 (892)
|-.++|++++.|++||+++++|++||+.||++.|+||||..+|++||+++||.
T Consensus 525 ------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId--------------------- 577 (713)
T COG2217 525 ------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID--------------------- 577 (713)
T ss_pred ------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH---------------------
Confidence 33799999999999999999999999999999999999999999999999995
Q ss_pred HHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcC
Q 043305 590 ETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILD 669 (892)
Q Consensus 590 ~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~d 669 (892)
.|+|.+.|+||.++|+.||++|++|+|+|||+||+|||.+|||||||| +|||+|+|+||++|++
T Consensus 578 ---------------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~ 641 (713)
T COG2217 578 ---------------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMR 641 (713)
T ss_pred ---------------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEec
Confidence 488999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 670 DNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVA 710 (892)
Q Consensus 670 dnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~ 710 (892)
|++..++++++.+|.++.+|++++.|.+.+|++++.+...+
T Consensus 642 ~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 642 DDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988877765
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.2e-49 Score=484.07 Aligned_cols=382 Identities=25% Similarity=0.328 Sum_probs=298.3
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHHH
Q 043305 191 KGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTV 270 (892)
Q Consensus 191 ~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (892)
..|+-++.+.+.+-.....+.++.|++.++++.. +.+ ..|...+..
T Consensus 344 ~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~------------~~~----------------------~~~~~~i~~ 389 (741)
T PRK11033 344 ERRAPIERFIDRFSRIYTPAIMLVALLVILVPPL------------LFA----------------------APWQEWIYR 389 (741)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------Hcc----------------------CCHHHHHHH
Confidence 3466677788888766655555555554444311 000 124556788
Q ss_pred HHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCC
Q 043305 271 AVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDS 350 (892)
Q Consensus 271 avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~ 350 (892)
++++++++|||+|.+++++++..++.+++|+|+++|+.+++|+|+++++||||||||||+|+|+|++++..+.
T Consensus 390 a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~------- 462 (741)
T PRK11033 390 GLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG------- 462 (741)
T ss_pred HHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeE-E
Q 043305 351 NSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGG-V 429 (892)
Q Consensus 351 ~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~ms-v 429 (892)
.+++ +++..+.+.. ..+.||.++||++++.+.+.+ +||.++++.+. .
T Consensus 463 ---~~~~--~~l~~aa~~e--------------~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~ 510 (741)
T PRK11033 463 ---ISES--ELLALAAAVE--------------QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGS 510 (741)
T ss_pred ---CCHH--HHHHHHHHHh--------------cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeE
Confidence 1121 1222221111 124799999999999876643 46777777653 1
Q ss_pred EEec-CCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhh
Q 043305 430 AVQL-PNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELS 508 (892)
Q Consensus 430 vv~~-~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~ 508 (892)
-++. -+|.. +.-|+++.+.+ ++ +.+.+.++++..+|.|++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~va~--------------- 555 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLVLR--------------- 555 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEEEE---------------
Confidence 1221 12221 22366654421 12 2344567789999999999996
Q ss_pred hccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhc
Q 043305 509 RWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRAL 588 (892)
Q Consensus 509 ~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l 588 (892)
|.+++|+++++||+|||++++|++|+++||+++|+|||+..+|.++|+++||.
T Consensus 556 -------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------- 608 (741)
T PRK11033 556 -------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------- 608 (741)
T ss_pred -------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--------------------
Confidence 34799999999999999999999999999999999999999999999999994
Q ss_pred CHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEc
Q 043305 589 SETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIIL 668 (892)
Q Consensus 589 ~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ 668 (892)
++++.+|+||..+|+.||+. +.|+|+|||.||+|||++|||||||| +|+++++++||++++
T Consensus 609 -----------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~ 669 (741)
T PRK11033 609 -----------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALT 669 (741)
T ss_pred -----------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEe
Confidence 24567899999999999965 68999999999999999999999999 899999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhh
Q 043305 669 DDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGAL 737 (892)
Q Consensus 669 ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~al 737 (892)
+|++..|.+++++||.++.||++++.|.+.+|++.+.+.+++.+ | +|+..+.+.+.++
T Consensus 670 ~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~-----~------~~~a~~~~~~ss~ 727 (741)
T PRK11033 670 HNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGIT-----G------LWLAVLADSGATA 727 (741)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----H------HHHHHHHHcChHH
Confidence 99999999999999999999999999999999988777654321 1 5777776655444
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=6.9e-48 Score=457.46 Aligned_cols=373 Identities=28% Similarity=0.370 Sum_probs=302.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHHHH
Q 043305 192 GRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVA 271 (892)
Q Consensus 192 ~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 271 (892)
+++-++...+.+-+.+..+.++.|++.+++..... .. ..+..+
T Consensus 158 ~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~------------------------------------~~-~~~~~~ 200 (556)
T TIGR01525 158 SKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG------------------------------------AL-GALYRA 200 (556)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------------------------cc-hHHHHH
Confidence 45567777888877777766666666665543210 01 567889
Q ss_pred HHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCCCCC
Q 043305 272 VTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPTDSN 351 (892)
Q Consensus 272 vtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~~~~ 351 (892)
+++++++|||+||+++++++++++++|+++|++||+++++|++|++++||||||||||+|+|+|.+++..+...
T Consensus 201 ~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~------ 274 (556)
T TIGR01525 201 LAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS------ 274 (556)
T ss_pred HHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC------
Confidence 99999999999999999999999999999999999999999999999999999999999999999987643211
Q ss_pred CCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeEEEE
Q 043305 352 SQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAV 431 (892)
Q Consensus 352 ~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~msvvv 431 (892)
...++++.+ +.... ..+.||++.||++++++.|.+... +| +. .
T Consensus 275 -~~~~~~l~~---a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~~------~ 317 (556)
T TIGR01525 275 -ISEEELLAL---AAALE--------------QSSSHPLARAIVRYAKKRGLELPK-----------QE--DV------E 317 (556)
T ss_pred -ccHHHHHHH---HHHHh--------------ccCCChHHHHHHHHHHhcCCCccc-----------cc--Ce------e
Confidence 001222221 11110 124699999999999987754221 12 00 0
Q ss_pred ecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhcc
Q 043305 432 QLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWA 511 (892)
Q Consensus 432 ~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~ 511 (892)
..++.++..++||+++..+..|+.. ..++. ....+++.+++++.+|+|++.++.
T Consensus 318 ~~~~~gi~~~~~g~~~~~lg~~~~~-~~~~~-------~~~~~~~~~~~~~~~g~~~~~v~~------------------ 371 (556)
T TIGR01525 318 EVPGKGVEATVDGQEEVRIGNPRLL-ELAAE-------PISASPDLLNEGESQGKTVVFVAV------------------ 371 (556)
T ss_pred EecCCeEEEEECCeeEEEEecHHHH-hhcCC-------CchhhHHHHHHHhhCCcEEEEEEE------------------
Confidence 1134467788899999999999743 11111 112234556778899999999984
Q ss_pred CCCCCcEEEEEEEecCCCchhHHHHHHHHHhCC-CEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCH
Q 043305 512 LPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAG-VKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSE 590 (892)
Q Consensus 512 ~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AG-I~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~ 590 (892)
|.+++|.+.++|++|||++++++.|+++| +++.|+|||+..++.++++++||.
T Consensus 372 ----~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~---------------------- 425 (556)
T TIGR01525 372 ----DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID---------------------- 425 (556)
T ss_pred ----CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC----------------------
Confidence 34799999999999999999999999999 999999999999999999999994
Q ss_pred HHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCC
Q 043305 591 TQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDD 670 (892)
Q Consensus 591 ~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~dd 670 (892)
.+|++..|++|..+++.+++.++.|+|+|||.||+||+++||||++|| .+++.+++.||+++.+|
T Consensus 426 --------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~ 490 (556)
T TIGR01525 426 --------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLND 490 (556)
T ss_pred --------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCC
Confidence 367888999999999999999999999999999999999999999999 89999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 671 NFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAA 711 (892)
Q Consensus 671 nf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~~ 711 (892)
+++.|.+++++||+++.||++++.|.+++|++++.+.+.+.
T Consensus 491 ~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 491 DLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999987766543
No 29
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-48 Score=447.52 Aligned_cols=340 Identities=27% Similarity=0.358 Sum_probs=274.2
Q ss_pred hhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeC
Q 043305 262 DGAIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVG 341 (892)
Q Consensus 262 ~~~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~ 341 (892)
..+...|..+++++|+||||+|.||++++...|...-+++|+|+|..+++|++.++++|.||||||||+|+++|+++...
T Consensus 527 ~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~ 606 (951)
T KOG0207|consen 527 DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSL 606 (951)
T ss_pred HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEec
Confidence 35778899999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred CcccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccc
Q 043305 342 GRKMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFN 421 (892)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~ 421 (892)
+.. ++......+..+.-. -+.||...|+++||++..... ....+.....|.
T Consensus 607 ~~~---------~~~~e~l~~v~a~Es----------------~SeHPig~AIv~yak~~~~~~----~~~~~~~~~~~p 657 (951)
T KOG0207|consen 607 SNP---------ISLKEALALVAAMES----------------GSEHPIGKAIVDYAKEKLVEP----NPEGVLSFEYFP 657 (951)
T ss_pred CCc---------ccHHHHHHHHHHHhc----------------CCcCchHHHHHHHHHhccccc----Cccccceeeccc
Confidence 432 222111112122211 146999999999999765110 111112222222
Q ss_pred cCCceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCC
Q 043305 422 SLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERI 501 (892)
Q Consensus 422 S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~ 501 (892)
.+.+...+.+ .| -|+.+. ...++..+|...+ +.+++.+++-...|..+.++|+
T Consensus 658 g~g~~~~~~~-----------~~-~~i~iG-N~~~~~r~~~~~~------~~i~~~~~~~e~~g~tvv~v~v-------- 710 (951)
T KOG0207|consen 658 GEGIYVTVTV-----------DG-NEVLIG-NKEWMSRNGCSIP------DDILDALTESERKGQTVVYVAV-------- 710 (951)
T ss_pred CCCcccceEE-----------ee-eEEeec-hHHHHHhcCCCCc------hhHHHhhhhHhhcCceEEEEEE--------
Confidence 2221211111 11 112222 2234444554332 2367777788889999999985
Q ss_pred CchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceec
Q 043305 502 PDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIE 581 (892)
Q Consensus 502 ~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~ 581 (892)
|-+++|+++++|++|||+..+|+.||+.||++.|+||||..||+++|+++||.
T Consensus 711 --------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------- 763 (951)
T KOG0207|consen 711 --------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------- 763 (951)
T ss_pred --------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-------------
Confidence 44799999999999999999999999999999999999999999999999964
Q ss_pred chhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhh
Q 043305 582 GKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE 661 (892)
Q Consensus 582 G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAke 661 (892)
.|+|...|+||.+.|+.+|++|..|||+|||+||+|||.+|||||+|| .|+++|.|
T Consensus 764 -----------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAie 819 (951)
T KOG0207|consen 764 -----------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIE 819 (951)
T ss_pred -----------------------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHh
Confidence 599999999999999999999999999999999999999999999999 88999999
Q ss_pred cccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 662 SSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708 (892)
Q Consensus 662 aaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~ 708 (892)
+|||+|+.+|+..++.++..+|+...+||.++.|.+++|++++.+..
T Consensus 820 aADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 820 AADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred hCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 99999999999999999999999999999999999999999877654
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=7.4e-46 Score=439.43 Aligned_cols=323 Identities=31% Similarity=0.444 Sum_probs=262.0
Q ss_pred HHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCccc
Q 043305 266 KILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKM 345 (892)
Q Consensus 266 ~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~ 345 (892)
..+..++++++++|||+|+++++++++.++.+++++|+++|+.+++|+|+++++||||||||||+|+|+|+++...+..
T Consensus 226 ~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~- 304 (562)
T TIGR01511 226 FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR- 304 (562)
T ss_pred HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-
Confidence 3678899999999999999999999999999999999999999999999999999999999999999999998753210
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCc
Q 043305 346 NPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKK 425 (892)
Q Consensus 346 ~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK 425 (892)
..++++.+ +.+.. ..+.||.+.|+++++.+.+.+... ..+|..
T Consensus 305 --------~~~~~l~~---aa~~e--------------~~s~HPia~Ai~~~~~~~~~~~~~---------~~~~~~--- 347 (562)
T TIGR01511 305 --------DRTELLAL---AAALE--------------AGSEHPLAKAIVSYAKEKGITLVE---------VSDFKA--- 347 (562)
T ss_pred --------CHHHHHHH---HHHHh--------------ccCCChHHHHHHHHHHhcCCCcCC---------CCCeEE---
Confidence 01222222 11111 113599999999999877653211 011111
Q ss_pred eeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchh
Q 043305 426 RGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEE 505 (892)
Q Consensus 426 ~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~ 505 (892)
.++.++...++| .+..+..|+.. ..+|. .++ ++.++|.+++.++.
T Consensus 348 -------~~g~Gi~~~~~g-~~~~iG~~~~~-~~~~~--~~~------------~~~~~g~~~~~~~~------------ 392 (562)
T TIGR01511 348 -------IPGIGVEGTVEG-TKIQLGNEKLL-GENAI--KID------------GKAEQGSTSVLVAV------------ 392 (562)
T ss_pred -------ECCceEEEEECC-EEEEEECHHHH-HhCCC--CCC------------hhhhCCCEEEEEEE------------
Confidence 123334445555 44555555432 22221 111 23467888887762
Q ss_pred hhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh
Q 043305 506 ELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF 585 (892)
Q Consensus 506 ~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 585 (892)
|.+++|+++++|++|||++++|++|++.|+++.|+|||+..++.++|+++||.
T Consensus 393 ----------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------- 445 (562)
T TIGR01511 393 ----------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------- 445 (562)
T ss_pred ----------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----------------
Confidence 56899999999999999999999999999999999999999999999999982
Q ss_pred hhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE
Q 043305 586 RALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI 665 (892)
Q Consensus 586 ~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi 665 (892)
++++..|++|.++++.++++++.|+|+|||.||+||+++|||||+|| .|++.++++||+
T Consensus 446 --------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Adv 504 (562)
T TIGR01511 446 --------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADV 504 (562)
T ss_pred --------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCE
Confidence 46677899999999999999999999999999999999999999999 899999999999
Q ss_pred EEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 666 IILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFV 709 (892)
Q Consensus 666 il~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~ 709 (892)
++++|+++.|.+++++||.++.+|++++.|.+++|++.+.+.+.
T Consensus 505 vl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~ 548 (562)
T TIGR01511 505 VLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAG 548 (562)
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999988776653
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.9e-45 Score=455.05 Aligned_cols=330 Identities=29% Similarity=0.376 Sum_probs=270.6
Q ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCc
Q 043305 264 AIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR 343 (892)
Q Consensus 264 ~~~~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~ 343 (892)
+...+..+++++|++|||+|+++++++++.++.+|+|+|+|||+++++|++|+++++|||||||||+|+|+|.+++..+.
T Consensus 464 ~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~ 543 (834)
T PRK10671 464 IVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG 543 (834)
T ss_pred HHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC
Confidence 55678889999999999999999999999999999999999999999999999999999999999999999998864321
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccC
Q 043305 344 KMNPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSL 423 (892)
Q Consensus 344 ~~~~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~ 423 (892)
+++. +++..+.+.++ .+.||.+.||++++...... ....|...
T Consensus 544 ----------~~~~--~~l~~a~~~e~--------------~s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~ 586 (834)
T PRK10671 544 ----------VDEA--QALRLAAALEQ--------------GSSHPLARAILDKAGDMTLP-----------QVNGFRTL 586 (834)
T ss_pred ----------CCHH--HHHHHHHHHhC--------------CCCCHHHHHHHHHHhhCCCC-----------CcccceEe
Confidence 1111 22222222221 14699999999988643211 11233332
Q ss_pred CceeEEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCc
Q 043305 424 KKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPD 503 (892)
Q Consensus 424 rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~ 503 (892)
..+ ++-... +|. .+++|+++.+.+. + ++ ++.+.+.+++++++|.+++.+|+
T Consensus 587 ~g~-Gv~~~~-~g~--~~~~G~~~~~~~~--------~----~~---~~~~~~~~~~~~~~g~~~v~va~---------- 637 (834)
T PRK10671 587 RGL-GVSGEA-EGH--ALLLGNQALLNEQ--------Q----VD---TKALEAEITAQASQGATPVLLAV---------- 637 (834)
T ss_pred cce-EEEEEE-CCE--EEEEeCHHHHHHc--------C----CC---hHHHHHHHHHHHhCCCeEEEEEE----------
Confidence 222 222111 232 2456888754321 1 11 23456677888999999999985
Q ss_pred hhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch
Q 043305 504 EEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK 583 (892)
Q Consensus 504 ~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~ 583 (892)
|..++|++++.|++||+++++|++|++.|+++.|+|||+..+|.++|+++||.
T Consensus 638 ------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--------------- 690 (834)
T PRK10671 638 ------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID--------------- 690 (834)
T ss_pred ------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC---------------
Confidence 23689999999999999999999999999999999999999999999999995
Q ss_pred hhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcc
Q 043305 584 SFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESS 663 (892)
Q Consensus 584 ~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaa 663 (892)
.++++..|++|.++++.++.+++.|+|+|||.||+|||++||+||+|| +|++.++++|
T Consensus 691 ---------------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~a 748 (834)
T PRK10671 691 ---------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETA 748 (834)
T ss_pred ---------------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhC
Confidence 377889999999999999999999999999999999999999999999 8999999999
Q ss_pred cEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 664 DIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINF 708 (892)
Q Consensus 664 Diil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~ 708 (892)
|+++++|++..|.+++++||.++.||++++.|.+.+|++++.+.+
T Consensus 749 d~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 749 AITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998877654
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.5e-45 Score=435.20 Aligned_cols=311 Identities=29% Similarity=0.405 Sum_probs=254.5
Q ss_pred HHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccC
Q 043305 267 ILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMN 346 (892)
Q Consensus 267 ~~~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~ 346 (892)
.+..++++++++|||+||++++++++.++++|+|+|+++|+++++|++|+++++|||||||||+|+|+|.+++..
T Consensus 196 ~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~----- 270 (536)
T TIGR01512 196 WVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA----- 270 (536)
T ss_pred HHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-----
Confidence 677899999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCce
Q 043305 347 PTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKR 426 (892)
Q Consensus 347 ~~~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~ 426 (892)
+++..+.+.. ..+.||.+.||++++.+.+ ||++.+..
T Consensus 271 -------------~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~ 307 (536)
T TIGR01512 271 -------------EVLRLAAAAE--------------QASSHPLARAIVDYARKRE----------------NVESVEEV 307 (536)
T ss_pred -------------HHHHHHHHHh--------------ccCCCcHHHHHHHHHHhcC----------------CCcceEEe
Confidence 2222222211 1246999999999987653 22222111
Q ss_pred e--EEEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCch
Q 043305 427 G--GVAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDE 504 (892)
Q Consensus 427 m--svvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~ 504 (892)
. ++....++..+ ..|+++.+ ..++ ...+..+|.+++.++
T Consensus 308 ~g~gi~~~~~g~~~---~ig~~~~~--------~~~~----------------~~~~~~~~~~~~~v~------------ 348 (536)
T TIGR01512 308 PGEGVRAVVDGGEV---RIGNPRSL--------EAAV----------------GARPESAGKTIVHVA------------ 348 (536)
T ss_pred cCCeEEEEECCeEE---EEcCHHHH--------hhcC----------------CcchhhCCCeEEEEE------------
Confidence 1 11111111111 12443211 1111 114556777776665
Q ss_pred hhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCC-EEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch
Q 043305 505 EELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGV-KVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK 583 (892)
Q Consensus 505 ~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI-~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~ 583 (892)
.|..++|.+.++|++|||++++|+.|+++|+ ++.|+|||+..+|.++++++||.
T Consensus 349 ----------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------- 403 (536)
T TIGR01512 349 ----------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------- 403 (536)
T ss_pred ----------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------
Confidence 2468999999999999999999999999999 99999999999999999999995
Q ss_pred hhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcc
Q 043305 584 SFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESS 663 (892)
Q Consensus 584 ~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaa 663 (892)
.+|++..|++|..+++.++++++.|+|+|||.||+||+++||+|++||.+|++.++++|
T Consensus 404 ---------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~a 462 (536)
T TIGR01512 404 ---------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETA 462 (536)
T ss_pred ---------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhC
Confidence 25678889999999999999999999999999999999999999999977899999999
Q ss_pred cEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 664 DIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVA 710 (892)
Q Consensus 664 Diil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt~Nv~~~~~~~~~ 710 (892)
|+++.+|+++.+.+++++||.++.||++++.|++.+|++++.+.+++
T Consensus 463 d~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 463 DVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999988887754
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-39 Score=351.90 Aligned_cols=319 Identities=28% Similarity=0.402 Sum_probs=255.9
Q ss_pred HHHHHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccccCceeEEEeCCCCCcccCceEEEEEEeCCcccCCC
Q 043305 269 TVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKMNPT 348 (892)
Q Consensus 269 ~~avtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~EtlG~vt~IcsDKTGTLT~n~M~V~~~~~~~~~~~~~ 348 (892)
..-++++|+.+|-....-++-.=..+|.|+.+-|++.++..|+|..|.++++..|||||+|-|.=...+++....
T Consensus 251 ~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g----- 325 (681)
T COG2216 251 TVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG----- 325 (681)
T ss_pred HHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC-----
Confidence 445778899999887666665556699999999999999999999999999999999999988765555553221
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCccccCCCCCCccccCChHHHHHHHHHHHcCCChhhhhcccceeeeeccccCCceeE
Q 043305 349 DSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGG 428 (892)
Q Consensus 349 ~~~~~~~~~~~~ll~~~i~~n~~~~~~~~~~~~~~~~~g~ptE~ALl~~a~~~g~~~~~~r~~~~i~~~~pF~S~rK~ms 428 (892)
.+++ + +..+....+ + .+ ..|.-+.+++++++++.+.+...... -....||+.+.++++
T Consensus 326 -----v~~~--~-la~aa~lsS---l-~D---------eTpEGrSIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSG 383 (681)
T COG2216 326 -----VSEE--E-LADAAQLAS---L-AD---------ETPEGRSIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMSG 383 (681)
T ss_pred -----CCHH--H-HHHHHHHhh---h-cc---------CCCCcccHHHHHHHhccCCCcccccc-cceeeecceeccccc
Confidence 1111 1 222222221 1 11 24566789999999886544322111 346789999988877
Q ss_pred EEEecCCCcEEEEEcCceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhh
Q 043305 429 VAVQLPNSEVHIHWKGAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELS 508 (892)
Q Consensus 429 vvv~~~~~~~~~~~KGA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~ 508 (892)
+-.. ++ +-.-|||.+.+.+..+. .|.. ..+.++...++.++.|-..|+++.
T Consensus 384 vd~~--~~--~~irKGA~dai~~~v~~----~~g~------~p~~l~~~~~~vs~~GGTPL~V~~--------------- 434 (681)
T COG2216 384 VDLP--GG--REIRKGAVDAIRRYVRE----RGGH------IPEDLDAAVDEVSRLGGTPLVVVE--------------- 434 (681)
T ss_pred ccCC--CC--ceeecccHHHHHHHHHh----cCCC------CCHHHHHHHHHHHhcCCCceEEEE---------------
Confidence 7543 33 45679999998776542 2211 134577888899999999998872
Q ss_pred hccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhc
Q 043305 509 RWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRAL 588 (892)
Q Consensus 509 ~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l 588 (892)
|-.++|++.++|-++||.+|-+.++|+.||+.+|+||||+.||.+||+|.|+.
T Consensus 435 -------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD-------------------- 487 (681)
T COG2216 435 -------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD-------------------- 487 (681)
T ss_pred -------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch--------------------
Confidence 44799999999999999999999999999999999999999999999999986
Q ss_pred CHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEc
Q 043305 589 SETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIIL 668 (892)
Q Consensus 589 ~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ 668 (892)
...|.++||||..+++.-|.+|+.|||||||+||||||.+||||+||. +||.+|||++.+|=+
T Consensus 488 ----------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDL 550 (681)
T COG2216 488 ----------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDL 550 (681)
T ss_pred ----------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhccccc
Confidence 256899999999999999999999999999999999999999999998 999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHH
Q 043305 669 DDNFASVVKVVRWGRSVYA 687 (892)
Q Consensus 669 ddnf~sIv~~i~~GR~v~~ 687 (892)
|.|-..+.+.+.-|+...-
T Consensus 551 DS~PTKlievV~IGKqlLi 569 (681)
T COG2216 551 DSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred CCCccceehHhhhhhhhee
Confidence 9999999999999998654
No 34
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.94 E-value=1.3e-26 Score=236.58 Aligned_cols=175 Identities=32% Similarity=0.593 Sum_probs=142.9
Q ss_pred CCchhHHHHHHHHhhhhhhhhhhcccCCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 043305 716 DVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLES 795 (892)
Q Consensus 716 ~~pl~~vqlLwvnli~d~l~alaLa~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~ai~q~~v~~~l~~~g~~~~~~~~ 795 (892)
|.|++++|+||+|+++|++|+++|+.|||++++|+|||++++++++++.+|++++.++++++++.+..++.+.+.++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999888887776554432
Q ss_pred CCcccccccchhHHHHHHHHHHHhhhhcccCCCCcccc--cCCcchHHHHHHHHHHHHHHHHHHHH--hhhccccccCCh
Q 043305 796 DSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIF--GGITKNRLFMGIVAVTLVLQILIIQF--LGKFASTTRLNW 871 (892)
Q Consensus 796 ~~~~~~~~~~~T~~F~~fV~~qvfn~~n~R~~~~~~~f--~~~~~N~~f~~~i~~~~~~qi~~v~~--~~~~f~~~~L~~ 871 (892)
.........++|+.|++++++|++|.+++|+.++ ++| ++.++|++++.++++++++|+++++. ++.+|++.|+++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~-~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRR-SVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSS-TCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccc-cceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 1111123468999999999999999999999653 344 58889999999999999999888754 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 043305 872 KHWIISVVIGFIRLFEHPVL 891 (892)
Q Consensus 872 ~~w~~~i~~~~~~l~~~eiv 891 (892)
.+|+++++++++.+++.|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~ 179 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIR 179 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.92 E-value=5e-25 Score=229.12 Aligned_cols=97 Identities=43% Similarity=0.700 Sum_probs=92.7
Q ss_pred CcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHH
Q 043305 516 DLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREE 595 (892)
Q Consensus 516 ~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~ 595 (892)
+++++|.+.+.||+||+++++|+.|+++||+++|+|||+..+|.++|+++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 67899999999999999999999999999999999999999999999999994
Q ss_pred HhcccccceEEEecc--CHhhH--HHHHHHHHHcCCeEEEeCCCCCChHhhhcCC
Q 043305 596 IAGEDFGMICVMGRS--SPSDK--LLLVQALRKRGDVVAVTGDGTNDAPALHEAD 646 (892)
Q Consensus 596 i~~~~~~~~~V~aR~--sP~dK--~~lV~~Lq~~g~vVa~tGDG~NDapALk~Ad 646 (892)
+..|++++ +|++| .++++.||.+++.|+|+|||.||++|+++||
T Consensus 168 -------~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 -------DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -------SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -------cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 56799999 99999 9999999977779999999999999999997
No 36
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.73 E-value=2.2e-17 Score=185.86 Aligned_cols=307 Identities=13% Similarity=0.200 Sum_probs=221.5
Q ss_pred CceeeeeccccccccCCCcccccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccC-------------CCCc-------
Q 043305 444 GAAEIVLDSCTGYIDTDDRLVQMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERE-------------RIPD------- 503 (892)
Q Consensus 444 GA~e~IL~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~-------------~~~~------- 503 (892)
|-.+.+++.|+.++|. ..+.||+..+|+++++...+-.-.| .|+|+|||+.... ..|.
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 5667788999999975 3578999999999998887766666 5999999974210 0000
Q ss_pred --------------hhh------------hhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHH
Q 043305 504 --------------EEE------------LSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQT 557 (892)
Q Consensus 504 --------------~~~------------~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~T 557 (892)
+.. .+..+..-.+.+|.|+|..+...|++....|+.+-+|.|+.+..+-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 000 000112335778999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcCCC---------------------------------------CCCceec-------chhhhhcCHH
Q 043305 558 ARAIALECGILTSEADA---------------------------------------TEPNIIE-------GKSFRALSET 591 (892)
Q Consensus 558 A~aIA~~~GI~~~~~~~---------------------------------------~~~~vi~-------G~~~~~l~~~ 591 (892)
.+-.|.++||...++.. .++...+ -..|+.++..
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999998765510 0000000 0111111100
Q ss_pred -------HHHHHhccccc--------------ceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCC--ChHhhhcCCee
Q 043305 592 -------QREEIAGEDFG--------------MICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTN--DAPALHEADIG 648 (892)
Q Consensus 592 -------e~~~i~~~~~~--------------~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~N--DapALk~AdVG 648 (892)
--...++...+ -+..|..|+|+.-.+|++.+|++|+|+++.|...| ..-.+-+|||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 00011111111 23579999999999999999999999999999988 44466889999
Q ss_pred EeecCC------------CcHh--h----------------hhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 649 LAMGIQ------------GTEV--A----------------KESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 698 (892)
Q Consensus 649 IAmgi~------------gt~v--A----------------keaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i~f~lt 698 (892)
||+..- ++.. | .-++|+-+.....-+|.++|..+|.....+|+.+.|.|.
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 997321 1111 1 113344444444567889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhhhhhh-cccCCCCccccccC
Q 043305 699 VNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALA-LATEPPTDHLMQRS 752 (892)
Q Consensus 699 ~Nv~~~~~~~~~~~~~~~~pl~~vqlLwvnli~d~l~ala-La~e~p~~~lm~r~ 752 (892)
..+...++.|++.++..+..++..|++|...+--++..+. |-+.+|.+.+|-+.
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~ma 1150 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMA 1150 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEee
Confidence 9999999999999999999999999999999876666555 55677777776553
No 37
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.62 E-value=3.5e-16 Score=141.70 Aligned_cols=73 Identities=38% Similarity=0.682 Sum_probs=65.1
Q ss_pred ccccCChHHHHHHHHHHHc--CCChhhhhcccceeeeeccccCCceeEEEEecCCCcEEEEEcCceeeeecccccc
Q 043305 383 AEVSGSPTEKAILQWGMKL--GMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTGY 456 (892)
Q Consensus 383 ~~~~g~ptE~ALl~~a~~~--g~~~~~~r~~~~i~~~~pF~S~rK~msvvv~~~~~~~~~~~KGA~e~IL~~C~~~ 456 (892)
.+..|+|||.||+.|+.++ +.+....+..+++++++||||+||||+|+++ .++.+.+|+|||||.||++|+++
T Consensus 17 ~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 17 EEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCCC
Confidence 3489999999999999999 4567889999999999999999999999998 34457779999999999999864
No 38
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.47 E-value=6.3e-14 Score=120.34 Aligned_cols=67 Identities=28% Similarity=0.576 Sum_probs=64.6
Q ss_pred cccHHHHHHHhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 043305 150 SLQVKGLSDMLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAAS 218 (892)
Q Consensus 150 ~~~~~gl~~~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvS 218 (892)
+++++++++.|+||..+||+.+ |+++|+++||+|++++++++++|+.++++|.|+++++|++||++|
T Consensus 3 ~~~~~~v~~~l~t~~~~GLs~~--ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 3 QLSVEEVLKRLNTSSSQGLSSE--EVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TSSHHHHHHHHTTBTSSBBTHH--HHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCCCCCCCHH--HHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 4679999999999999999987 999999999999999999999999999999999999999999997
No 39
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.46 E-value=3.2e-13 Score=125.77 Aligned_cols=125 Identities=24% Similarity=0.338 Sum_probs=106.5
Q ss_pred EEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHh
Q 043305 518 VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIA 597 (892)
Q Consensus 518 ~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~ 597 (892)
...+.+.---.+=++|++.|++|++. ++|.+.|||..-+-...|+-.||.
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~----------------------------- 69 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP----------------------------- 69 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc-----------------------------
Confidence 45566666667889999999999999 999999999999999999999986
Q ss_pred cccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCC--CcHhhhhcccEEEcCCCchHH
Q 043305 598 GEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQ--GTEVAKESSDIIILDDNFASV 675 (892)
Q Consensus 598 ~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~--gt~vAkeaaDiil~ddnf~sI 675 (892)
.-+|||-..|+.|.++++.|+++++.|.|+|||.||.+||++||+||..=.+ ..+-+.++||+++.+ ...+
T Consensus 70 -----~~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ 142 (152)
T COG4087 70 -----VERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEI 142 (152)
T ss_pred -----eeeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHH
Confidence 3479999999999999999999999999999999999999999999876322 234467899999876 5555
Q ss_pred HHHH
Q 043305 676 VKVV 679 (892)
Q Consensus 676 v~~i 679 (892)
++++
T Consensus 143 ldl~ 146 (152)
T COG4087 143 LDLL 146 (152)
T ss_pred HHHh
Confidence 5543
No 40
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.37 E-value=6.4e-13 Score=112.28 Aligned_cols=62 Identities=31% Similarity=0.485 Sum_probs=59.2
Q ss_pred HhcCCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043305 159 MLKTNLEKGIPGDDVDLLKRRSAFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALG 222 (892)
Q Consensus 159 ~L~t~~~~GL~~~~~~~~~R~~~~G~N~~~~~~~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg 222 (892)
.|+||++.||+++ ++++|+++||+|++++++++++|+++|++|.|+++++|++||++|+++|
T Consensus 2 ~l~~~~~~GLs~~--~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSE--EAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHH--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 4789999999988 8999999999999999999999999999999999999999999999887
No 41
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=99.36 E-value=3e-13 Score=103.85 Aligned_cols=45 Identities=58% Similarity=0.871 Sum_probs=41.6
Q ss_pred CCCCCccCCCCCCCchHHhHHHHHHh-hhhcccccccccccchhHHH
Q 043305 28 DDEGTFSIPRTKDAPIVRLKRWRQAA-LVLNASRRFRYTLDLKKEEE 73 (892)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 73 (892)
|+.++|+++ +||+|+|+++|||+|+ +|+|++|||||++||+|+++
T Consensus 1 yl~~~Fdi~-~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFDIP-AKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccCCC-CCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 568899999 4999999999999999 99999999999999998764
No 42
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.91 E-value=9.2e-09 Score=111.66 Aligned_cols=66 Identities=26% Similarity=0.352 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|..-++.|.+. | +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++=.++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666654 3 57999999999999999999999999 999999999999998888888888875
No 43
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.90 E-value=5e-09 Score=109.95 Aligned_cols=148 Identities=24% Similarity=0.245 Sum_probs=102.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhh---hh-----c-----------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSF---RA-----L----------- 588 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~---~~-----l----------- 588 (892)
.+.+++.++|++++++|+++.++||.+...++.+++++++..+-...+++.+....+- .. +
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998643222222222221100 00 0
Q ss_pred -------------------CHHHHHHHhcccccceEEE-----ec--cCHhhHHHHHHHHHHc----CCeEEEeCCCCCC
Q 043305 589 -------------------SETQREEIAGEDFGMICVM-----GR--SSPSDKLLLVQALRKR----GDVVAVTGDGTND 638 (892)
Q Consensus 589 -------------------~~~e~~~i~~~~~~~~~V~-----aR--~sP~dK~~lV~~Lq~~----g~vVa~tGDG~ND 638 (892)
..+++.+.+.+. .+.+. .. ....+|...++.+.+. .+.++++||+.||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND 175 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKER--GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEND 175 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhC--CeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHH
Confidence 001111111110 11111 11 2245888888888764 3469999999999
Q ss_pred hHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHH
Q 043305 639 APALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 639 apALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
.+|++.|++|+||+ ++.+.+|+.||+|..+++-.+|.++
T Consensus 176 ~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 176 IDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 99999999999999 9999999999999987666666554
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.90 E-value=1.1e-08 Score=108.16 Aligned_cols=152 Identities=22% Similarity=0.173 Sum_probs=105.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceec---chhhhh--c--------------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIE---GKSFRA--L-------------- 588 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~---G~~~~~--l-------------- 588 (892)
++.+.+.++|+++++.|+++.++||.....+..+++++|+..+-...+++.+.. ++.+.. +
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 378899999999999999999999999999999999999864322222222221 110000 0
Q ss_pred -------------------------CHHHHHHHhcccccceEE-----EeccCHh--hHHHHHHHHHHc----CCeEEEe
Q 043305 589 -------------------------SETQREEIAGEDFGMICV-----MGRSSPS--DKLLLVQALRKR----GDVVAVT 632 (892)
Q Consensus 589 -------------------------~~~e~~~i~~~~~~~~~V-----~aR~sP~--dK~~lV~~Lq~~----g~vVa~t 632 (892)
..++..+.+.+......+ +....|. +|..-++.+.+. .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 011122222110001111 1122232 477778777664 3569999
Q ss_pred CCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 633 GDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 633 GDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
||+.||.+|++.|++|+||| ++.+.+|+.||+|..+++=.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999998888888888775
No 45
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.88 E-value=1.5e-08 Score=106.77 Aligned_cols=152 Identities=23% Similarity=0.237 Sum_probs=102.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh----hh-hc--------------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS----FR-AL-------------- 588 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~----~~-~l-------------- 588 (892)
.+.+.+.++|++++++||++.++||.+...+..+++++|+..+....+++.+..... +. .+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999653322112222211100 00 00
Q ss_pred ----------------------CHHHHHHHhcccccceEEE-----eccCH--hhHHHHHHHHHHc----CCeEEEeCCC
Q 043305 589 ----------------------SETQREEIAGEDFGMICVM-----GRSSP--SDKLLLVQALRKR----GDVVAVTGDG 635 (892)
Q Consensus 589 ----------------------~~~e~~~i~~~~~~~~~V~-----aR~sP--~dK~~lV~~Lq~~----g~vVa~tGDG 635 (892)
..++..++.........+. ....| .+|..-++.+.++ .+.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0111111111100011111 11122 4788888888664 3579999999
Q ss_pred CCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchH----HHHHHH
Q 043305 636 TNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFAS----VVKVVR 680 (892)
Q Consensus 636 ~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~s----Iv~~i~ 680 (892)
.||.+|++.|++|+||| ++.+.+|+.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999988777777 555553
No 46
>PRK10976 putative hydrolase; Provisional
Probab=98.87 E-value=1.8e-08 Score=109.25 Aligned_cols=66 Identities=29% Similarity=0.313 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhccc--EEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSD--IIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaD--iil~ddnf~sIv~~i~ 680 (892)
+|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|..+++=.++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466667766553 2 56999999999999999999999999 99999999988 6777777778888774
No 47
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.86 E-value=1.3e-08 Score=110.79 Aligned_cols=152 Identities=14% Similarity=0.138 Sum_probs=101.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceec--chhhh--hcC--------------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIE--GKSFR--ALS-------------- 589 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~--G~~~~--~l~-------------- 589 (892)
.+.+.++++|+++++.|+++.+.||.....+..+.+++|+..+-...+++.+.+ |+.+. .++
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999999864311111111110 10000 000
Q ss_pred -----------------------------------------------------HHHHH---HHhccccc-ceEEE-----
Q 043305 590 -----------------------------------------------------ETQRE---EIAGEDFG-MICVM----- 607 (892)
Q Consensus 590 -----------------------------------------------------~~e~~---~i~~~~~~-~~~V~----- 607 (892)
++++. +.+.+.+. .+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 01111 11110000 11111
Q ss_pred -eccCH--hhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE--EEcCCCchHHHHH
Q 043305 608 -GRSSP--SDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI--IILDDNFASVVKV 678 (892)
Q Consensus 608 -aR~sP--~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi--il~ddnf~sIv~~ 678 (892)
...+| -+|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|++||. +..+++-.++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 11222 2588888877664 3 57999999999999999999999999 999999999996 6667777888877
Q ss_pred HH
Q 043305 679 VR 680 (892)
Q Consensus 679 i~ 680 (892)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 74
No 48
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.85 E-value=2.6e-08 Score=107.91 Aligned_cols=152 Identities=28% Similarity=0.321 Sum_probs=108.3
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh------------------------
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS------------------------ 584 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~------------------------ 584 (892)
+.+.++++|+++++.|++|.++||.....++.+.+++|+..+-...+++.+....+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999999999999999985321111111111000
Q ss_pred ------------------------------------hhhc----------CH---HHHHHHhccccc-ceEEEeccCH--
Q 043305 585 ------------------------------------FRAL----------SE---TQREEIAGEDFG-MICVMGRSSP-- 612 (892)
Q Consensus 585 ------------------------------------~~~l----------~~---~e~~~i~~~~~~-~~~V~aR~sP-- 612 (892)
+... .. ++..+.+.+.+. ....+.++.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0000 01 111122221111 2233334333
Q ss_pred -------hhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 613 -------SDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 613 -------~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.+|..-++.|.+. | +.|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++....+-.+|.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 3798888888774 4 35999999999999999999999999 8899999999988888899999998864
No 49
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.84 E-value=2e-08 Score=104.70 Aligned_cols=130 Identities=14% Similarity=0.063 Sum_probs=95.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecc-hhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEG-KSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G-~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..--. +.+.+++ ..+ + . ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a---n~l~~~~~g~~---t-------------G-~~ 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEIDDSDRV---V-------------G-YQ 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc---eeeEEecCCee---E-------------C-ee
Confidence 57999999999999975 999999999999999999999963111 0011111 000 0 0 01
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHH
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWG 682 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~G 682 (892)
. ..|++|...++.+++.|..+.++|||.||.||++.||+|+++. +.+..+++||=.-.-.+.+.+..++.+.
T Consensus 127 ~--~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 127 L--RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred e--cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 1 3577999999999988888999999999999999999999995 5665555554333333577777776553
No 50
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.79 E-value=2.6e-08 Score=110.87 Aligned_cols=130 Identities=22% Similarity=0.312 Sum_probs=98.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
|++|++.+.++.|+++|+++.++||.....+..+.+++|+...-. +.-.+.+|.- .-.+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a--n~lei~dg~l------------------tg~v~ 240 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA--NELEIMDGKL------------------TGNVL 240 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE--eEEEEECCEE------------------EeEec
Confidence 689999999999999999999999999888999999999853110 0000111100 00111
Q ss_pred ec-cCHhhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GR-SSPSDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR-~sP~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.. +....|...++.+.++ | +.+.++|||.||.+|++.|++|+|| ++.+..|+.||.++...++..+..++
T Consensus 241 g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 241 GDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred CccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 10 2236788888888764 3 6788999999999999999999999 78899999999999988888887655
No 51
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.76 E-value=2.6e-08 Score=104.56 Aligned_cols=129 Identities=19% Similarity=0.273 Sum_probs=95.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++++.++.|++.|+++.++||.+...+..+.+.+|+..--. .....++..+ ...+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~---~~~~~~~~~~-----------------~~~~~ 144 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA---NRLEVEDGKL-----------------TGLVE 144 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe---eEEEEECCEE-----------------EEEec
Confidence 689999999999999999999999999999999999999863110 0000000000 00111
Q ss_pred ec-cCHhhHHHHHHHHHHcC----CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHH
Q 043305 608 GR-SSPSDKLLLVQALRKRG----DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 608 aR-~sP~dK~~lV~~Lq~~g----~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
++ ..+..|..+++.+.++. +.+.++||+.||.+|++.|+++++++ +.+..+++||.+|.++||..+..+
T Consensus 145 ~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 145 GPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 11 12234666777665542 35888999999999999999999885 778899999999999999888754
No 52
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.75 E-value=5.9e-08 Score=105.26 Aligned_cols=66 Identities=27% Similarity=0.410 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||++..+++-.++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666666543 3 56999999999999999999999999 888889999999998888888888875
No 53
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.74 E-value=3.8e-08 Score=104.24 Aligned_cols=151 Identities=23% Similarity=0.255 Sum_probs=103.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCce-e-cchhhh--hc---------------
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNI-I-EGKSFR--AL--------------- 588 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~v-i-~G~~~~--~l--------------- 588 (892)
.+.+++.+++++++++|+++.+.||.....++.+..++++..+....+++.+ . +|+.+. .+
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 94 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEH 94 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHT
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhc
Confidence 4679999999999999999999999999999999999998732211111111 0 000000 00
Q ss_pred ------------------------------------------------------CHHHHHHH---hcccccceEEEecc-
Q 043305 589 ------------------------------------------------------SETQREEI---AGEDFGMICVMGRS- 610 (892)
Q Consensus 589 ------------------------------------------------------~~~e~~~i---~~~~~~~~~V~aR~- 610 (892)
+.+++..+ +.+.+.....+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 174 (254)
T PF08282_consen 95 NISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSS 174 (254)
T ss_dssp TCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEec
Confidence 01111111 11111111122222
Q ss_pred --------CHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHH
Q 043305 611 --------SPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 611 --------sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
...+|..-++.|.+. .+.++++||+.||.+||+.|+.|+||| ++++..|..||.+....|=.+|.++
T Consensus 175 ~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 175 PYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp TTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred ccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHh
Confidence 235799888888763 368999999999999999999999999 9999999999999988777888776
Q ss_pred H
Q 043305 679 V 679 (892)
Q Consensus 679 i 679 (892)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
No 54
>PLN02887 hydrolase family protein
Probab=98.69 E-value=1.1e-07 Score=113.18 Aligned_cols=66 Identities=30% Similarity=0.437 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
+|..-++.|.+. | +.|+++|||.||.+||+.|++||||| ++.+.+|+.||+|..+++=.+|.++|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 344444444443 2 46899999999999999999999999 999999999999998888888888875
No 55
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.68 E-value=7.7e-08 Score=97.31 Aligned_cols=102 Identities=17% Similarity=0.247 Sum_probs=81.6
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
.+|+.|+++|+++.++|+.+...+..+.+.+|+..-. .+ ..-.|+-
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f---------~~-------------------------~kpkp~~ 86 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFH---------EG-------------------------IKKKTEP 86 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEE---------ec-------------------------CCCCHHH
Confidence 6899999999999999999999999999999996210 00 0123444
Q ss_pred HHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC
Q 043305 615 KLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN 671 (892)
Q Consensus 615 K~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn 671 (892)
-..+++.+.-..+.++++||+.||.+|++.|++++||+ ++.+.+|+.|++|..+++
T Consensus 87 ~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 87 YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 44445544433467999999999999999999999999 899999999999986544
No 56
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.64 E-value=3e-07 Score=99.29 Aligned_cols=151 Identities=15% Similarity=0.094 Sum_probs=97.4
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh--------h--hhcCHHHHHHHhc
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS--------F--RALSETQREEIAG 598 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~--------~--~~l~~~e~~~i~~ 598 (892)
..+.+.++|++++++|+++.++||.....+..+.+++|+..+....+++.+..... + ..++.+...+++.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 34468999999999999999999999999999999999864322223333332110 0 0011111100000
Q ss_pred -------------------------------------cccc--------------------ceEEEe-----cc--CHhh
Q 043305 599 -------------------------------------EDFG--------------------MICVMG-----RS--SPSD 614 (892)
Q Consensus 599 -------------------------------------~~~~--------------------~~~V~a-----R~--sP~d 614 (892)
.... .+.+.. .. .-.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0000 011100 00 1235
Q ss_pred HHHHHHHHHHc------CCeEEEeCCCCCChHhhhcCCeeEeecCCCc---Hhhhhc--c-cEEEcCCCchHHHHHHH
Q 043305 615 KLLLVQALRKR------GDVVAVTGDGTNDAPALHEADIGLAMGIQGT---EVAKES--S-DIIILDDNFASVVKVVR 680 (892)
Q Consensus 615 K~~lV~~Lq~~------g~vVa~tGDG~NDapALk~AdVGIAmgi~gt---~vAkea--a-Diil~ddnf~sIv~~i~ 680 (892)
|..-++.+.+. .+.|.++||+.||.+||+.|++|+||| ++. +..|+. | ++|..+++-.++.++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 66666666543 456999999999999999999999999 776 467886 4 58877778888888775
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.60 E-value=1.9e-07 Score=93.14 Aligned_cols=97 Identities=21% Similarity=0.312 Sum_probs=77.7
Q ss_pred HHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhH
Q 043305 536 AIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDK 615 (892)
Q Consensus 536 aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK 615 (892)
+|+.|++.|+++.++||+....+..+.+..|+... +++ . ..|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~---------~~~---------------------------~--~~k 77 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL---------YQG---------------------------Q--SNK 77 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------Eec---------------------------c--cch
Confidence 99999999999999999999999999999998621 111 0 123
Q ss_pred HHHHHHHHH----cCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC
Q 043305 616 LLLVQALRK----RGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN 671 (892)
Q Consensus 616 ~~lV~~Lq~----~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn 671 (892)
...++.+.+ ..+.+.++||+.||.+|++.|+++++|. .+.+..+..||+++..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 78 LIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 444444332 3467999999999999999999999998 778889999999997553
No 58
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.56 E-value=7.1e-07 Score=97.24 Aligned_cols=152 Identities=13% Similarity=0.040 Sum_probs=95.7
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC-CcCCCCCCceecchh--------h--hhcCHHHHHHHh
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT-SEADATEPNIIEGKS--------F--RALSETQREEIA 597 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~-~~~~~~~~~vi~G~~--------~--~~l~~~e~~~i~ 597 (892)
+-+.++++|++++++||++++.||.....+..+++++|+.. +-...+++.+..... . ..++.+...+++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45779999999999999999999999999999999999842 222223333332110 0 001111111110
Q ss_pred cc----------------------------------ccc--ceEEEe----------------------------ccCH-
Q 043305 598 GE----------------------------------DFG--MICVMG----------------------------RSSP- 612 (892)
Q Consensus 598 ~~----------------------------------~~~--~~~V~a----------------------------R~sP- 612 (892)
.. ... ...+.. ...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 00 000 000111 1112
Q ss_pred -hhHHHHHHHHHH-------cCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHh-----hhhcccEEEcCCCchHHHHHH
Q 043305 613 -SDKLLLVQALRK-------RGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEV-----AKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 613 -~dK~~lV~~Lq~-------~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~v-----AkeaaDiil~ddnf~sIv~~i 679 (892)
-+|..-++.|.+ ..+.|+++|||.||.+||+.|++|+|||....+. .+..+|++.....-.++.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 356666666654 2357999999999999999999999999333221 455789988887777888877
Q ss_pred H
Q 043305 680 R 680 (892)
Q Consensus 680 ~ 680 (892)
+
T Consensus 265 ~ 265 (271)
T PRK03669 265 D 265 (271)
T ss_pred H
Confidence 5
No 59
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.56 E-value=3.2e-07 Score=98.95 Aligned_cols=65 Identities=31% Similarity=0.324 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHH
Q 043305 613 SDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 613 ~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
.+|..-++.+.+. .+.++++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-.+|.++
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 3688888888764 357999999999999999999999999 8899999999999988777776654
No 60
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.44 E-value=2.3e-06 Score=93.29 Aligned_cols=152 Identities=18% Similarity=0.129 Sum_probs=97.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchh----------------hh--hcC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKS----------------FR--ALS 589 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~----------------~~--~l~ 589 (892)
.+.+++.++|++|++.|+++.++||.....+..+++++|+..+....+++.+...+. +. .++
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGPP 100 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCCC
Confidence 467889999999999999999999999999999999999864332223333322100 00 011
Q ss_pred HHHHHHHh-------------------------------------cccccc----------------------eEEE---
Q 043305 590 ETQREEIA-------------------------------------GEDFGM----------------------ICVM--- 607 (892)
Q Consensus 590 ~~e~~~i~-------------------------------------~~~~~~----------------------~~V~--- 607 (892)
.+...+++ ...... +.+.
T Consensus 101 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 180 (273)
T PRK00192 101 YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGG 180 (273)
T ss_pred HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECC
Confidence 11000000 000000 0000
Q ss_pred --ecc-CHhhHHHHHHHHHHc----C-CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhh----hcc-cEEE--cCCCc
Q 043305 608 --GRS-SPSDKLLLVQALRKR----G-DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAK----ESS-DIII--LDDNF 672 (892)
Q Consensus 608 --aR~-sP~dK~~lV~~Lq~~----g-~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAk----eaa-Diil--~ddnf 672 (892)
-.. .+.+|..-++.+.+. . +.|+++||+.||.+|++.|++|++|+ ++.+..| .+| +.+. ...+=
T Consensus 181 ~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~ 259 (273)
T PRK00192 181 RFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGP 259 (273)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCc
Confidence 000 011677667666543 4 88999999999999999999999999 9999999 666 5666 34456
Q ss_pred hHHHHHHH
Q 043305 673 ASVVKVVR 680 (892)
Q Consensus 673 ~sIv~~i~ 680 (892)
.++.++++
T Consensus 260 ~Gv~~~l~ 267 (273)
T PRK00192 260 EGWAEAIN 267 (273)
T ss_pred HHHHHHHH
Confidence 67777664
No 61
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.43 E-value=8.7e-07 Score=93.05 Aligned_cols=116 Identities=23% Similarity=0.297 Sum_probs=86.2
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCC---CCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA---TEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~---~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
.+++|++.+.++.++++|.+|+++||-...-+..||+.+|+...-... .++ +++|
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG--------------------- 133 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTG--------------------- 133 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEec---------------------
Confidence 588999999999999999999999999999999999999997532200 001 1222
Q ss_pred eEEEe-ccCHhhHHHHHHHHHHc-CC---eEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEE
Q 043305 604 ICVMG-RSSPSDKLLLVQALRKR-GD---VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIII 667 (892)
Q Consensus 604 ~~V~a-R~sP~dK~~lV~~Lq~~-g~---vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil 667 (892)
.|.. .+..+.|...++.+.+. |. .+.++|||.||.|||+.|+.+++.. .....+..|+..+
T Consensus 134 -~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 134 -RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred -eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 2222 33447888888666653 54 4888999999999999999999985 5544445555444
No 62
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.36 E-value=1.2e-06 Score=90.02 Aligned_cols=110 Identities=20% Similarity=0.280 Sum_probs=83.4
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
.+|+.+++.|+++.++||.....+..+++++|+... ..| .++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~---------f~g-----------------------------~~~ 96 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL---------YQG-----------------------------QSN 96 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee---------ecC-----------------------------CCc
Confidence 699999999999999999999999999999998521 111 123
Q ss_pred HHHHHHHHHH-c---CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC----chHHHHHHHHHH
Q 043305 615 KLLLVQALRK-R---GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN----FASVVKVVRWGR 683 (892)
Q Consensus 615 K~~lV~~Lq~-~---g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn----f~sIv~~i~~GR 683 (892)
|...++.+.+ . .+.|+|+||+.||.+|++.|+++++++ ++.+..+..+|+++...+ +..+.+.+...|
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 4444444433 3 357999999999999999999999987 777888899999996432 455555554333
No 63
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.35 E-value=2e-06 Score=89.23 Aligned_cols=125 Identities=20% Similarity=0.257 Sum_probs=90.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++ +++.++|+-....+..+.+++|+...-. .....++.. .+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~---~~~~~~~~~--------------------~i~ 123 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC---HSLEVDEDG--------------------MIT 123 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc---ceEEECCCC--------------------eEE
Confidence 4689999999999999 9999999999999999999999853110 001111000 011
Q ss_pred e--ccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccE-EEcCCCchHHHHHH
Q 043305 608 G--RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI-IILDDNFASVVKVV 679 (892)
Q Consensus 608 a--R~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDi-il~ddnf~sIv~~i 679 (892)
. -..|..|...++.++..++.+.|+|||.||.+|.+.|++|+..+ .+.+...+.++. ++. ++..+...+
T Consensus 124 ~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 124 GYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred CccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 0 12477888999999888899999999999999999999999876 333344455665 443 466666555
No 64
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.29 E-value=2.7e-06 Score=87.66 Aligned_cols=117 Identities=21% Similarity=0.268 Sum_probs=81.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|++.|+++.++|+-....+..+++..|+..--. .....+...+ .. + . .+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~---~~~~~~~~g~--~~--------p----~--~~ 140 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS---NELVFDEKGF--IQ--------P----D--GI 140 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE---EEEEEcCCCe--Ee--------c----c--ee
Confidence 589999999999999999999999999999999999999752110 0001100000 00 0 1 11
Q ss_pred eccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhccc
Q 043305 608 GRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSD 664 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaD 664 (892)
-...|..|...++.+.++ .+.+.++||+.||.+|++.||++++++ .+....+.++|
T Consensus 141 ~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 141 VRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred eEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 123456677777776554 345999999999999999999999997 43444555555
No 65
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.24 E-value=7.6e-06 Score=87.21 Aligned_cols=66 Identities=20% Similarity=0.298 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhccc----EEEcCCCchHHHHHHH
Q 043305 614 DKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSD----IIILDDNFASVVKVVR 680 (892)
Q Consensus 614 dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaD----iil~ddnf~sIv~~i~ 680 (892)
+|...++.|.++ | +.|+++||+.||.+||+.|++|++|+ ++.+..|+.|| ++...++=.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 788888888764 3 35888999999999999999999999 89999999999 7766666677888774
No 66
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.12 E-value=2.9e-06 Score=86.68 Aligned_cols=92 Identities=30% Similarity=0.369 Sum_probs=69.6
Q ss_pred hhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEecc
Q 043305 531 PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRS 610 (892)
Q Consensus 531 ~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~ 610 (892)
+++.+.|+.++++|++++++||+....++.+|+.+|+.... ++ +.++..- ......+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-------v~-~~~~~~~-------------~~~~~~~~~ 150 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-------VI-GNELFDN-------------GGGIFTGRI 150 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-------EE-EEEEECT-------------TCCEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-------EE-EEeeeec-------------ccceeeeeE
Confidence 78889999999999999999999999999999999997421 11 1111000 012344555
Q ss_pred CHh---hHHHHHHHH------HHcCCeEEEeCCCCCChHhhh
Q 043305 611 SPS---DKLLLVQAL------RKRGDVVAVTGDGTNDAPALH 643 (892)
Q Consensus 611 sP~---dK~~lV~~L------q~~g~vVa~tGDG~NDapALk 643 (892)
+|. .|...++.+ +.....+.++|||.||.||||
T Consensus 151 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 151 TGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 544 499999999 334789999999999999996
No 67
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.11 E-value=1.7e-05 Score=83.27 Aligned_cols=136 Identities=14% Similarity=0.092 Sum_probs=89.7
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
-+++||+.+.++.|++.|+++.++||.....+..+.+..+...... .+...++|..+.... + .-..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~--~n~~~~~~~~~~~~~--------p----~~~~ 134 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIY--CNEADFSNEYIHIDW--------P----HPCD 134 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEE--eceeEeeCCeeEEeC--------C----CCCc
Confidence 3789999999999999999999999999999999998875432110 011223333221100 0 0000
Q ss_pred E---eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhh--cccEEEcCCCchHHHHHHH
Q 043305 607 M---GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE--SSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 607 ~---aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAke--aaDiil~ddnf~sIv~~i~ 680 (892)
+ ..| ...|..+++.++...+.+.|+|||.||.+|++.||+++|=+ .-.+-.++ .+.+.+ ++|..|...++
T Consensus 135 ~~~~~~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 135 GTCQNQC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred cccccCC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 0 012 35799999999888888899999999999999999988754 11111111 122222 46888877764
No 68
>PLN02954 phosphoserine phosphatase
Probab=98.10 E-value=2.1e-05 Score=82.93 Aligned_cols=128 Identities=23% Similarity=0.297 Sum_probs=84.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+.....-. ..+..+.. -.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~-~~~~~~~~--------------------g~~~ 142 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFA-NQILFGDS--------------------GEYA 142 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEE-eEEEEcCC--------------------CcEE
Confidence 37899999999999999999999999999999999999996311000 00000000 0000
Q ss_pred ec------cCHhhHHHHHHHHHHc--CCeEEEeCCCCCChHhhhc--CCeeEeecCCC-cHhhhhcccEEEcCCCchHHH
Q 043305 608 GR------SSPSDKLLLVQALRKR--GDVVAVTGDGTNDAPALHE--ADIGLAMGIQG-TEVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 608 aR------~sP~dK~~lV~~Lq~~--g~vVa~tGDG~NDapALk~--AdVGIAmgi~g-t~vAkeaaDiil~ddnf~sIv 676 (892)
+. +.+..|...++.++++ .+.+.++||+.||..|.+. ++++++.|... .+.....+|+++.+ +..+.
T Consensus 143 g~~~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~ 220 (224)
T PLN02954 143 GFDENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLI 220 (224)
T ss_pred CccCCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHH
Confidence 00 1123476777776654 3568899999999999877 57777666222 23345568999864 66665
Q ss_pred HH
Q 043305 677 KV 678 (892)
Q Consensus 677 ~~ 678 (892)
+.
T Consensus 221 ~~ 222 (224)
T PLN02954 221 EV 222 (224)
T ss_pred Hh
Confidence 43
No 69
>PRK08238 hypothetical protein; Validated
Probab=98.08 E-value=0.00061 Score=80.03 Aligned_cols=94 Identities=20% Similarity=0.277 Sum_probs=71.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
|++|++.+.+++++++|+++.++|+-+...+..+++..|+.+ .++.++. .
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd--------~Vigsd~----------------------~ 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD--------GVFASDG----------------------T 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC--------EEEeCCC----------------------c
Confidence 578999999999999999999999999999999999999832 2222211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
.++.|+.|...++..... +-+.++||..||.|+++.|+-.++++
T Consensus 122 ~~~kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 122 TNLKGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred cccCCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 135566676554422222 22577899999999999999999997
No 70
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.07 E-value=1.1e-05 Score=78.71 Aligned_cols=118 Identities=23% Similarity=0.357 Sum_probs=95.4
Q ss_pred HHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhh
Q 043305 535 DAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSD 614 (892)
Q Consensus 535 ~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~d 614 (892)
-.|+.+.++||+|-++||.+....+.=|+++||. .+..| -++
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~---------~~~qG-----------------------------~~d 83 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK---------HLYQG-----------------------------ISD 83 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc---------eeeec-----------------------------hHh
Confidence 5789999999999999999999999999999996 22222 247
Q ss_pred HHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCC----chHHHHHHHHHHHHH
Q 043305 615 KLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDN----FASVVKVVRWGRSVY 686 (892)
Q Consensus 615 K~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddn----f~sIv~~i~~GR~v~ 686 (892)
|....+.|.++ -+-||++||-.||.|+|+..++++|.. .+.+-.++.||+|+.... ++.+.++|..++.-+
T Consensus 84 K~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 84 KLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 77777766654 467999999999999999999999987 788888999999987543 666777777777766
Q ss_pred HHHHH
Q 043305 687 ANIQK 691 (892)
Q Consensus 687 ~nI~k 691 (892)
+-..+
T Consensus 163 d~~~~ 167 (170)
T COG1778 163 DEALG 167 (170)
T ss_pred HHHHh
Confidence 65544
No 71
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.00 E-value=1.3e-05 Score=80.58 Aligned_cols=110 Identities=21% Similarity=0.286 Sum_probs=78.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
.+-||+++.+..||+.|.+|.++||--..-+..+|.++||...+...+.-..-...+|...+ ...-.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd-------------~~~pt 154 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFD-------------TNEPT 154 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccc-------------cCCcc
Confidence 35799999999999999999999999999999999999998654432211111100111000 00011
Q ss_pred eccCHhhHHHHHHHHHHc--CCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 608 GRSSPSDKLLLVQALRKR--GDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~--g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
+| ..-|...++.+++. -..++|+|||.||.+|+..||-=|+.|
T Consensus 155 sd--sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 SD--SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cc--CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 12 24788999999885 468999999999999999988777665
No 72
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.99 E-value=5.8e-05 Score=81.20 Aligned_cols=154 Identities=15% Similarity=0.119 Sum_probs=98.5
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCc--CCCCCCceecchhh------h-----------
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSE--ADATEPNIIEGKSF------R----------- 586 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~--~~~~~~~vi~G~~~------~----------- 586 (892)
..+..|...+.++++++.||.++.+||......+.+.++.++..++ ...+++.+..+... .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3467899999999999999999999999999999999999987652 11223323221100 0
Q ss_pred ---------hc-----------------CHHH-------HHHHhcccccceEEE-e-----ccCH--hhHHHHHHHHHHc
Q 043305 587 ---------AL-----------------SETQ-------REEIAGEDFGMICVM-G-----RSSP--SDKLLLVQALRKR 625 (892)
Q Consensus 587 ---------~l-----------------~~~e-------~~~i~~~~~~~~~V~-a-----R~sP--~dK~~lV~~Lq~~ 625 (892)
.+ ..+. +.+.+.+...++.+. + ...| .+|...++.|+++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 0011 111111100011111 1 1122 4788888888764
Q ss_pred ----CCeEEEeCCCCCChHhhhc-CCeeEeecCCCcHhhhhccc-------EEEcCCCchHHHHHHH
Q 043305 626 ----GDVVAVTGDGTNDAPALHE-ADIGLAMGIQGTEVAKESSD-------IIILDDNFASVVKVVR 680 (892)
Q Consensus 626 ----g~vVa~tGDG~NDapALk~-AdVGIAmgi~gt~vAkeaaD-------iil~ddnf~sIv~~i~ 680 (892)
.+.|.++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++-..-.-++|.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3679999999999999998 77999999 88887776443 4333334466666663
No 73
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.96 E-value=2.9e-05 Score=79.01 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=77.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++|++.+.++.|++.|+++.++|+.+......+.+..|+...-. .++..+...+ . .......+. +..++
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~i~~~~~~~~-~-~g~~~~~~~---~~~~~ 141 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI-----EIYSNPASFD-N-DGRHIVWPH---HCHGC 141 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee-----EEeccCceEC-C-CCcEEEecC---CCCcc
Confidence 789999999999999999999999999999999999999853211 1121111000 0 000000000 00011
Q ss_pred ec-cCHhhHHHHHHHHHHc-CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 608 GR-SSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 608 aR-~sP~dK~~lV~~Lq~~-g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
.. .....|..+++.++++ .+.+.++|||.||..|.++||+-+|
T Consensus 142 ~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 142 CSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 11 1123699999999887 8889999999999999999998775
No 74
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=97.94 E-value=1.8e-05 Score=83.82 Aligned_cols=89 Identities=24% Similarity=0.332 Sum_probs=68.8
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhccccceecCcEEEEEEeeccccccccceEEeeccccccchhhhHHHHHHHH
Q 043305 192 GRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEYLAGVRFVRFFTGHTKNAYGTIQFKAGKTKVSDAVDGAIKILTVA 271 (892)
Q Consensus 192 ~~s~~~~~~~a~~D~~liIL~vaAvvSl~lg~~~eg~~gvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 271 (892)
+++.++...+.+...++.+.++.+++.++++... .. ...+...+..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~----------------~~~~~~~~~~~ 188 (230)
T PF00122_consen 142 KKSPLERKLNKIAKILIIIILAIAILVFIIWFFN-----------------DS----------------GISFFKSFLFA 188 (230)
T ss_dssp S-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG-----------------ST----------------TCHCCHHHHHH
T ss_pred cchhhhhhhHHHHHHHHhcccccchhhhccceec-----------------cc----------------ccccccccccc
Confidence 4577788888887777766666666666544320 00 02356778889
Q ss_pred HHHhhhcccCCchhHHHHHHHHHHHHHHhCCceeeccccccc
Q 043305 272 VTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACET 313 (892)
Q Consensus 272 vtilvvavPegLplavtl~la~~~~~m~k~~~lVr~l~a~Et 313 (892)
+++++++||++||+++++++.+++++|+++|++||+++++|+
T Consensus 189 i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 189 ISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 999999999999999999999999999999999999999996
No 75
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.91 E-value=2.8e-05 Score=82.00 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=86.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++||+.+.++.|++.|+++.++||-....+..+.+.. +...... .+...++|+.+..- .+ .-...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~-~n~~~~~~~~~~~~--------kp----~p~~~ 139 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIY-CNGSDFSGEYITIT--------WP----HPCDE 139 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEE-EeEEEecCCeeEEe--------cc----CCccc
Confidence 68999999999999999999999999999999999988 6431100 00011222221100 00 00000
Q ss_pred ---eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhh--cccEEEcCCCchHHHHHHH
Q 043305 608 ---GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE--SSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 ---aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAke--aaDiil~ddnf~sIv~~i~ 680 (892)
.++ ...|..+++.++...+.+.++|||.||.+|.+.||+.++-+ .-.+.+++ .+.+.+ ++|..|...++
T Consensus 140 ~~~~~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 140 HCQNHC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred cccccC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 011 13488888888877778999999999999999999977632 11122222 233333 45888777663
No 76
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.86 E-value=4.4e-05 Score=81.01 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=38.8
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT 569 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~ 569 (892)
+..-+++.++|++++++|++++++||.....+..+.+++|+..
T Consensus 14 ~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 14 GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 4455679999999999999999999999999999999999854
No 77
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.85 E-value=3.6e-05 Score=77.74 Aligned_cols=97 Identities=22% Similarity=0.244 Sum_probs=70.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC---C-CCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD---A-TEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~---~-~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
+++|++.+.++.+++.|+++.++||.....+..+++..|+..--.. . .++ .++|+.. . +
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-~~~g~~~------------~----~ 135 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG-LLTGPIE------------G----Q 135 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC-EEeCccC------------C----c
Confidence 4689999999999999999999999999999999999998631100 0 000 1111100 0 0
Q ss_pred eEEEeccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcC
Q 043305 604 ICVMGRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEA 645 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~A 645 (892)
..+.+..|...++.++++ .+.+.++|||.||.+|++.|
T Consensus 136 ----~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 ----VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ----ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 124567899999887664 35689999999999999876
No 78
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.84 E-value=6.9e-05 Score=77.56 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=77.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecch-hhhhcCHHHHHHHhcccccce
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGK-SFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~-~~~~l~~~e~~~i~~~~~~~~ 604 (892)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..--.. .+....+ .+. -
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~---~l~~~~~g~~~-----------------g 144 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT---RLEESEDGIYT-----------------G 144 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec---ceEEcCCCEEe-----------------C
Confidence 346899999999999999999999999999999999999998631110 0111000 000 0
Q ss_pred EEE-eccCHhhHHHHHHHHHHc-C---CeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 605 CVM-GRSSPSDKLLLVQALRKR-G---DVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 605 ~V~-aR~sP~dK~~lV~~Lq~~-g---~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
.+. -.+.++.|...++.+.++ + +.+.++||+.||.|+++.|+.++++.
T Consensus 145 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 NIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 000 124567888878776543 3 36888999999999999999999875
No 79
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.84 E-value=9.9e-05 Score=77.59 Aligned_cols=128 Identities=23% Similarity=0.338 Sum_probs=87.9
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
-++.||+.+.++.+++.|+++.++||........+.+..|+...-. .++.+....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~-------------------- 146 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS-----VVIGGDSLP-------------------- 146 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc-----EEEcCCCCC--------------------
Confidence 3578999999999999999999999999999999999999853211 122221110
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe-eEee--cCC-CcHhhhhcccEEEcCCCchHHHHHHHH
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI-GLAM--GIQ-GTEVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV-GIAm--gi~-gt~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
...-.|+--..+++.++...+.+.++||+.||..|.+.|++ +|.+ |.. ..+.....+|+++. ++..+...+.+
T Consensus 147 ~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 147 NKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred CCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 00112332233444444445679999999999999999988 4444 322 23445567888884 58888887754
No 80
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.76 E-value=6.1e-05 Score=71.31 Aligned_cols=117 Identities=18% Similarity=0.203 Sum_probs=78.5
Q ss_pred EecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 524 GIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 524 gi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
.-..++++++.+.+++|++.|++++++||.....+....+.+|+..... .++................ ...
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~----~~~ 90 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD-----PVITSNGAAIYYPKEGLFL----GGG 90 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh-----heeccchhhhhcccccccc----ccc
Confidence 4456899999999999999999999999999999999999999842211 1111110000000000000 012
Q ss_pred eEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhc-CCeeE
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHE-ADIGL 649 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~-AdVGI 649 (892)
...+.+-.|+.+..+.+.+....+.+.++||+.||..|++. ..-+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 91 PFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred ccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 23445666777777777776666789999999999999998 44444
No 81
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.73 E-value=0.00015 Score=76.35 Aligned_cols=39 Identities=13% Similarity=0.132 Sum_probs=36.1
Q ss_pred chhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 530 R~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
-+.++++|+.++++||++.++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999985
No 82
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.66 E-value=0.0003 Score=74.28 Aligned_cols=127 Identities=23% Similarity=0.344 Sum_probs=94.0
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
+.++-|+++++++.++++|++..++|++....+..+.+..|+...-. .++.+....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~-----~i~g~~~~~------------------- 142 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD-----VIVGGDDVP------------------- 142 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc-----eEEcCCCCC-------------------
Confidence 44678999999999999999999999999999999999999975321 111111110
Q ss_pred EEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCC---eeEeecCC-CcHhhhhcccEEEcCCCchHHHHHH
Q 043305 606 VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEAD---IGLAMGIQ-GTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~Ad---VGIAmgi~-gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
...-.|.....+.+.+....+.+.|+||..+|..|=|.|+ ||+..|.. +.......+|+++.+ +..+...+
T Consensus 143 -~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 143 -PPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred -CCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 0112455555555555544447999999999999999998 88888853 556677789999965 77766654
No 83
>PLN02382 probable sucrose-phosphatase
Probab=97.57 E-value=0.00074 Score=78.12 Aligned_cols=151 Identities=18% Similarity=0.138 Sum_probs=92.5
Q ss_pred CchhHHHHH-HHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcC--CCCCCceecchhh--------------------
Q 043305 529 CRPSVKDAI-RLCRIAGVKVRMVTGDNIQTARAIALECGILTSEA--DATEPNIIEGKSF-------------------- 585 (892)
Q Consensus 529 lR~~v~~aI-~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~--~~~~~~vi~G~~~-------------------- 585 (892)
+.+...+++ +++++.|+.++..||..+..++.+.++.++..++. ..++..+..+...
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333445555 88999999999999999999999999999887631 0111111111100
Q ss_pred ---hhc--------------------CHHH-------HHHHhcccccceEEE------eccCH--hhHHHHHHHHHHc--
Q 043305 586 ---RAL--------------------SETQ-------REEIAGEDFGMICVM------GRSSP--SDKLLLVQALRKR-- 625 (892)
Q Consensus 586 ---~~l--------------------~~~e-------~~~i~~~~~~~~~V~------aR~sP--~dK~~lV~~Lq~~-- 625 (892)
..+ .+++ +.+.+.+.-..+.+. -...| .+|..-++.|.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000 0111 111111000011211 12233 3588888888765
Q ss_pred --C---CeEEEeCCCCCChHhhhcCC-eeEeecCCCcHhhhhcc--------cEEEcCC-CchHHHHHHH
Q 043305 626 --G---DVVAVTGDGTNDAPALHEAD-IGLAMGIQGTEVAKESS--------DIIILDD-NFASVVKVVR 680 (892)
Q Consensus 626 --g---~vVa~tGDG~NDapALk~Ad-VGIAmgi~gt~vAkeaa--------Diil~dd-nf~sIv~~i~ 680 (892)
| +.|.++||+.||.+||+.|+ .||+|| ++.+..|+.+ +++..++ +-++|.++++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 47899999999999999999 699999 8888877643 5554432 4556666664
No 84
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.52 E-value=0.00061 Score=81.69 Aligned_cols=40 Identities=18% Similarity=0.207 Sum_probs=36.6
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
.-+.+.++|+.++++||.++++||.....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3457899999999999999999999999999999999974
No 85
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.46 E-value=0.00089 Score=72.92 Aligned_cols=42 Identities=2% Similarity=-0.018 Sum_probs=38.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT 569 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~ 569 (892)
..-+.+.++|++|+++||.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 355679999999999999999999999999999999999864
No 86
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.46 E-value=0.00052 Score=71.35 Aligned_cols=125 Identities=18% Similarity=0.227 Sum_probs=84.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++|+++.++||.....+..+-+..|+...-. .++.+.+. ..
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~-----~i~~~~~~--------------------~~ 129 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFD-----HVIGSDEV--------------------PR 129 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhee-----eEEecCcC--------------------CC
Confidence 678999999999999999999999999999999999999853211 11111110 01
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEe---ecC-CCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA---MGI-QGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIA---mgi-~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.+-.|+-=..+++.++-..+.+.|+||+.+|..+-++|++... -|. +..+..++.+|+++.+ +..+..++
T Consensus 130 ~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 130 PKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred CCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 1222332233334343335679999999999999999998643 231 2233467789998854 66666554
No 87
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.30 E-value=0.001 Score=72.67 Aligned_cols=125 Identities=20% Similarity=0.299 Sum_probs=79.8
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.++.|++.++++.|++.|+++.++||-....+..+....|+...- ..++.+.+..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----~~i~~~d~~~-------------------- 154 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----RWIIGGDTLP-------------------- 154 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----eEEEecCCCC--------------------
Confidence 368899999999999999999999999999999888888875311 0122211100
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-Ee--ecCC-CcHhhhhcccEEEcCCCchHHHHH
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LA--MGIQ-GTEVAKESSDIIILDDNFASVVKV 678 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IA--mgi~-gt~vAkeaaDiil~ddnf~sIv~~ 678 (892)
..+-.|+-=..+.+.+.-..+.+.++||+.||..+-+.|++- ++ .|.. ..+..+..+|.++.+ +..+..+
T Consensus 155 ~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~--l~el~~~ 228 (272)
T PRK13223 155 QKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDD--LRALLPG 228 (272)
T ss_pred CCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECC--HHHHHHH
Confidence 001112212223333322346799999999999999999973 33 3321 222345678998854 6555543
No 88
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.23 E-value=0.00097 Score=69.44 Aligned_cols=120 Identities=18% Similarity=0.220 Sum_probs=79.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+-+...+..+.+..|+...-. .++.+.+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~---------------------- 137 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS-----VLIGGDSL---------------------- 137 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc-----EEEecCCC----------------------
Confidence 578999999999999999999999999999999999999863211 12211110
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCeeEeecCCC--c--HhhhhcccEEEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIGLAMGIQG--T--EVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVGIAmgi~g--t--~vAkeaaDiil~ddnf~sIv~ 677 (892)
.+..|. ...+.+.+++. .+.+.++||+.||..|.++|++-...-..| + +.....+|+++.+ +..+..
T Consensus 138 ~~~Kp~-p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 138 AQRKPH-PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred CCCCCC-hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 111221 12233333333 466999999999999999999865421112 1 2334568888754 655543
No 89
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.16 E-value=0.0016 Score=71.00 Aligned_cols=145 Identities=12% Similarity=0.171 Sum_probs=86.0
Q ss_pred CCchhHHHHHHHHHh-CCCEEEEEecCCHHHHHHHHHHcCCC--CCcCC----CCC------------------------
Q 043305 528 PCRPSVKDAIRLCRI-AGVKVRMVTGDNIQTARAIALECGIL--TSEAD----ATE------------------------ 576 (892)
Q Consensus 528 plR~~v~~aI~~l~~-AGI~v~mvTGDn~~TA~aIA~~~GI~--~~~~~----~~~------------------------ 576 (892)
.+-+++.+++++|++ .|++|.++||.....+..+.+..++. ..+.. ..+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345899999999998 89999999999999999888777642 11110 000
Q ss_pred ---Cceecch------hhhhcC--HHHHHH---HhcccccceEEE-----e--ccCHhhHHHHHHHHHHc----CCeEEE
Q 043305 577 ---PNIIEGK------SFRALS--ETQREE---IAGEDFGMICVM-----G--RSSPSDKLLLVQALRKR----GDVVAV 631 (892)
Q Consensus 577 ---~~vi~G~------~~~~l~--~~e~~~---i~~~~~~~~~V~-----a--R~sP~dK~~lV~~Lq~~----g~vVa~ 631 (892)
+..++-+ .++... ++.+.. .+.+.+....+. - +..-.+|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000000 001111 111111 111111111111 1 22224888888877654 357888
Q ss_pred eCCCCCChHhhhcC----CeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 632 TGDGTNDAPALHEA----DIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 632 tGDG~NDapALk~A----dVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
+||+.||.+|++.+ ++||+|| ++. ..|++.|.+ -..+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999 443 446777764 44444433
No 90
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.15 E-value=0.0025 Score=66.73 Aligned_cols=125 Identities=17% Similarity=0.196 Sum_probs=83.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+...-. .++.+.+.. .
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~-----~i~~~~~~~--------------------~ 136 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD-----VVITLDDVE--------------------H 136 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee-----EEEecCcCC--------------------C
Confidence 367999999999999999999999999999999999999863211 112111100 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee---EeecCCCc-HhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG---LAMGIQGT-EVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG---IAmgi~gt-~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.+..|+--..+.+.+....+.+.++||+.+|..|-++|++- +.-|.... +.....+|.++. ++..+...+
T Consensus 137 ~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 137 AKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred CCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 11223333334444433346789999999999999999984 33342222 234456888875 477776654
No 91
>PTZ00174 phosphomannomutase; Provisional
Probab=97.03 E-value=0.0027 Score=68.34 Aligned_cols=53 Identities=21% Similarity=0.285 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHcCCeEEEeCC----CCCChHhhhcC-CeeEeecCCCcHhhhhcccEE
Q 043305 613 SDKLLLVQALRKRGDVVAVTGD----GTNDAPALHEA-DIGLAMGIQGTEVAKESSDII 666 (892)
Q Consensus 613 ~dK~~lV~~Lq~~g~vVa~tGD----G~NDapALk~A-dVGIAmgi~gt~vAkeaaDii 666 (892)
-+|..-++.|.++.+.|+++|| |-||.+||+.| -.|++++ +..+..|..+.++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 4788888888777788999999 99999999976 5677776 7888877766544
No 92
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.92 E-value=0.0037 Score=65.87 Aligned_cols=119 Identities=14% Similarity=0.241 Sum_probs=78.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|++.|+++.++|+........+.+..||...-. .++.+.+.. .
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----~~~~~~~~~--------------------~ 146 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD-----ALASAEKLP--------------------Y 146 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc-----EEEEcccCC--------------------C
Confidence 578999999999999999999999999999999999999864321 122221110 0
Q ss_pred eccCHhhHHHHHHHHHHcC---CeEEEeCCCCCChHhhhcCCeeEeecCCC---cHhhhhcccEEEcCCCchHHH
Q 043305 608 GRSSPSDKLLLVQALRKRG---DVVAVTGDGTNDAPALHEADIGLAMGIQG---TEVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g---~vVa~tGDG~NDapALk~AdVGIAmgi~g---t~vAkeaaDiil~ddnf~sIv 676 (892)
.+-.|+ .+.+.+++.| +.+.++||..||+.+-++|++....-..+ .+.-...+|+++.+ |..+.
T Consensus 147 ~Kp~~~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 147 SKPHPE---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred CCCCHH---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 112232 2333444433 56899999999999999999865432122 12222357777754 65554
No 93
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.87 E-value=0.0035 Score=65.05 Aligned_cols=39 Identities=28% Similarity=0.390 Sum_probs=35.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECG 566 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~G 566 (892)
++.+++.++++++++.|+++.++||.....+..+.++.+
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999998844
No 94
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.84 E-value=0.011 Score=64.49 Aligned_cols=130 Identities=14% Similarity=0.186 Sum_probs=82.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCC-C------CCceecchhhhhcCHHHHHHHhccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA-T------EPNIIEGKSFRALSETQREEIAGED 600 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~-~------~~~vi~G~~~~~l~~~e~~~i~~~~ 600 (892)
++|||+.+.++.|++.||++.++||-....+..+.++.|+..+.... . ..-+.+|.. . +
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--~----------P-- 186 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--G----------P-- 186 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC--C----------C--
Confidence 68999999999999999999999999999999999999986433210 0 001112210 0 0
Q ss_pred ccceEEEeccCHhhHHHHHHH-----HH--HcCCeEEEeCCCCCChHhhhcC---CeeEeecC-CC-----cHhhhhccc
Q 043305 601 FGMICVMGRSSPSDKLLLVQA-----LR--KRGDVVAVTGDGTNDAPALHEA---DIGLAMGI-QG-----TEVAKESSD 664 (892)
Q Consensus 601 ~~~~~V~aR~sP~dK~~lV~~-----Lq--~~g~vVa~tGDG~NDapALk~A---dVGIAmgi-~g-----t~vAkeaaD 664 (892)
- +....|...+.. ++ .....|.++|||.||++|-.-. +--+.+|- +. -+.-+++-|
T Consensus 187 --~------i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~D 258 (277)
T TIGR01544 187 --L------IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYD 258 (277)
T ss_pred --c------ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCC
Confidence 0 011345544432 22 1235788999999999995543 12233331 11 122467899
Q ss_pred EEEcCCCchHHHHHH
Q 043305 665 IIILDDNFASVVKVV 679 (892)
Q Consensus 665 iil~ddnf~sIv~~i 679 (892)
|||.+|.=-.++.+|
T Consensus 259 ivl~~D~t~~v~~~i 273 (277)
T TIGR01544 259 IVLVQDETLEVANSI 273 (277)
T ss_pred EEEECCCCchHHHHH
Confidence 999999766666554
No 95
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.78 E-value=0.0055 Score=65.07 Aligned_cols=127 Identities=17% Similarity=0.167 Sum_probs=85.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...- ..++.+.... .
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~--------------------~ 149 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC-----AVLIGGDTLA--------------------E 149 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc-----cEEEecCcCC--------------------C
Confidence 57899999999999999999999999999888888888885321 1222221100 1
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEe---ecCC-Cc-HhhhhcccEEEcCCCchHHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA---MGIQ-GT-EVAKESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIA---mgi~-gt-~vAkeaaDiil~ddnf~sIv~~i~~ 681 (892)
.+-.|+-=..+++.+.-..+.+.|+||+.||..|-+.|++-.. -|.. .. +.....+|+++.+ +..|...+-|
T Consensus 150 ~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~~~ 226 (229)
T PRK13226 150 RKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPATW 226 (229)
T ss_pred CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHhcC
Confidence 1223433334444444445779999999999999999987642 2311 11 1234568998854 7777766554
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.76 E-value=0.0095 Score=65.20 Aligned_cols=119 Identities=17% Similarity=0.219 Sum_probs=80.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+.+...+..+-+.+|+...-. .++.+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~-----~vi~~~~----------------------- 193 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS-----VVQAGTP----------------------- 193 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE-----EEEecCC-----------------------
Confidence 568999999999999999999999999999999999999863211 1222211
Q ss_pred eccCHhhHHHHHHHHHH---cCCeEEEeCCCCCChHhhhcCCeeEe---ecCCCc-HhhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRK---RGDVVAVTGDGTNDAPALHEADIGLA---MGIQGT-EVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~---~g~vVa~tGDG~NDapALk~AdVGIA---mgi~gt-~vAkeaaDiil~ddnf~sIv~~i 679 (892)
.+..+..+.+.+++ ..+.++|+||+.+|..|-++|++-.. -|.... +.....+|+++. ++..|...+
T Consensus 194 ---~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 194 ---ILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred ---CCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 00011222333333 34579999999999999999987543 221111 123456899885 477777655
No 97
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.59 E-value=0.017 Score=71.87 Aligned_cols=60 Identities=20% Similarity=0.246 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHc--CCeEEEeCCCCCChHhhhcC---CeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 613 SDKLLLVQALRKR--GDVVAVTGDGTNDAPALHEA---DIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 613 ~dK~~lV~~Lq~~--g~vVa~tGDG~NDapALk~A---dVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
-+|...++.+.+. .+.|+++||+.||.+|++.+ ..+++|| + ++.+|++.+.+. ..+.+.+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~----~~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-P----GESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-C----CCCcceEeCCCH--HHHHHHH
Confidence 5799999888874 35899999999999999986 6899998 4 356788888752 4444444
No 98
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.54 E-value=0.011 Score=62.04 Aligned_cols=122 Identities=25% Similarity=0.374 Sum_probs=80.9
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC--CCcCCCCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL--TSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~--~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+. ..- ..++.+.+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-----~~i~~~~~~~------------------ 142 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-----DAVVCPSDVA------------------ 142 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-----CEEEcCCcCC------------------
Confidence 378999999999999999999999999999999999999986 211 1222222110
Q ss_pred EEEeccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcCCeeEeec-CCCcH----hhhhcccEEEcCCCchHH
Q 043305 605 CVMGRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEADIGLAMG-IQGTE----VAKESSDIIILDDNFASV 675 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~AdVGIAmg-i~gt~----vAkeaaDiil~ddnf~sI 675 (892)
..+-.|+ .+-+.+++. .+.+.|+||+.+|..|-+.|++..+++ ..|.. .....+|.++.+ ++.+
T Consensus 143 --~~KP~p~---~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~--~~~l 215 (220)
T TIGR03351 143 --AGRPAPD---LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDS--VADL 215 (220)
T ss_pred --CCCCCHH---HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecC--HHHH
Confidence 0111222 222333332 357999999999999999999986322 13321 223457877743 6665
Q ss_pred HHH
Q 043305 676 VKV 678 (892)
Q Consensus 676 v~~ 678 (892)
..+
T Consensus 216 ~~~ 218 (220)
T TIGR03351 216 PAL 218 (220)
T ss_pred HHh
Confidence 543
No 99
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.54 E-value=0.014 Score=63.45 Aligned_cols=123 Identities=13% Similarity=0.164 Sum_probs=80.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+..... ..++.+.+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~----d~i~~~~~~---------------------- 154 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP----DHVVTTDDV---------------------- 154 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc----eEEEcCCcC----------------------
Confidence 467899999999999999999999999998888888777653210 112222110
Q ss_pred eccCHhhHHHHHHHHHHcC----CeEEEeCCCCCChHhhhcCCe---eEeecCCC------------------------c
Q 043305 608 GRSSPSDKLLLVQALRKRG----DVVAVTGDGTNDAPALHEADI---GLAMGIQG------------------------T 656 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g----~vVa~tGDG~NDapALk~AdV---GIAmgi~g------------------------t 656 (892)
.+..| +...+.+.+++.| +.+.|+||+.+|..|=+.|++ |+.-|... .
T Consensus 155 ~~~KP-~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
T PRK13478 155 PAGRP-YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARA 233 (267)
T ss_pred CCCCC-ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHH
Confidence 01122 2233444555443 569999999999999999996 55444210 1
Q ss_pred HhhhhcccEEEcCCCchHHHHHH
Q 043305 657 EVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 657 ~vAkeaaDiil~ddnf~sIv~~i 679 (892)
+.....+|+++.+ +..+...+
T Consensus 234 ~l~~~~a~~vi~~--~~~l~~~l 254 (267)
T PRK13478 234 RLRAAGAHYVIDT--IADLPAVI 254 (267)
T ss_pred HHHHcCCCeehhh--HHHHHHHH
Confidence 2234468888854 77776655
No 100
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.44 E-value=0.013 Score=61.62 Aligned_cols=106 Identities=14% Similarity=0.192 Sum_probs=73.9
Q ss_pred CCchhHHHHHH-HHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIR-LCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~-~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.++|++.+.|+ .+++.|++++++|+=....++.+|+..|+.... .++ |.++..-.. +++ .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~------~~i-~t~le~~~g-----------g~~-~ 154 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL------NLI-ASQIERGNG-----------GWV-L 154 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC------cEE-EEEeEEeCC-----------ceE-c
Confidence 46899999996 788899999999999999999999996664321 111 222211000 010 1
Q ss_pred EeccCHhhHHHHHHHHHH-cCCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 607 MGRSSPSDKLLLVQALRK-RGDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~-~g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
-..|..+.|..-++..-. ..+..-+=||+.||.|||+.||..+++.
T Consensus 155 g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 155 PLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 124667889877765432 2234557799999999999999999885
No 101
>PRK11590 hypothetical protein; Provisional
Probab=96.29 E-value=0.016 Score=60.80 Aligned_cols=105 Identities=14% Similarity=0.165 Sum_probs=74.1
Q ss_pred CCchhHHHHH-HHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhh-cCHHHHHHHhcccccceE
Q 043305 528 PCRPSVKDAI-RLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRA-LSETQREEIAGEDFGMIC 605 (892)
Q Consensus 528 plR~~v~~aI-~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~-l~~~e~~~i~~~~~~~~~ 605 (892)
+++|++.+.| +.+++.|+++.++|+-....+..+++..|+...+ .++ |.++.. ++ . + .
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~------~~i-~t~l~~~~t--------g----~-~ 154 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV------NLI-ASQMQRRYG--------G----W-V 154 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC------ceE-EEEEEEEEc--------c----E-E
Confidence 4589999999 5788899999999999999999999999963211 111 222211 00 0 1 0
Q ss_pred EEeccCHhhHHHHHHHHH-HcCCeEEEeCCCCCChHhhhcCCeeEeec
Q 043305 606 VMGRSSPSDKLLLVQALR-KRGDVVAVTGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq-~~g~vVa~tGDG~NDapALk~AdVGIAmg 652 (892)
.-..|..+.|...++..- ......-+=||..||.|+|+.|+-+++++
T Consensus 155 ~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 155 LTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 112367789988777542 22344456799999999999999999985
No 102
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.27 E-value=0.036 Score=59.71 Aligned_cols=121 Identities=17% Similarity=0.172 Sum_probs=70.5
Q ss_pred HHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC--CCCCceecchhhhh-----------cC--------------
Q 043305 537 IRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD--ATEPNIIEGKSFRA-----------LS-------------- 589 (892)
Q Consensus 537 I~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~--~~~~~vi~G~~~~~-----------l~-------------- 589 (892)
++...+.++.++++||.+...++.+.++.++..++.- ..+..+..|+.+.. ..
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 3334488999999999999999999999998765421 11222222221110 00
Q ss_pred -------------------------HHHHHHHhcccccceEEEe-c-----c--CHhhHHHHHHHHHHc----CCeEEEe
Q 043305 590 -------------------------ETQREEIAGEDFGMICVMG-R-----S--SPSDKLLLVQALRKR----GDVVAVT 632 (892)
Q Consensus 590 -------------------------~~e~~~i~~~~~~~~~V~a-R-----~--sP~dK~~lV~~Lq~~----g~vVa~t 632 (892)
-+++.+.+...--...+.. . . ....|...|+.|+++ .+.|.+.
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a 187 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVA 187 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 0233333322111122211 1 1 135799999999886 2457778
Q ss_pred CCCCCChHhhhcCCeeEeecCCCcHh
Q 043305 633 GDGTNDAPALHEADIGLAMGIQGTEV 658 (892)
Q Consensus 633 GDG~NDapALk~AdVGIAmgi~gt~v 658 (892)
||+.||.+||..++-||.+| ++.+.
T Consensus 188 GDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 188 GDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp ESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred eCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 99999999999999999999 66555
No 103
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.20 E-value=0.011 Score=63.11 Aligned_cols=88 Identities=22% Similarity=0.253 Sum_probs=62.0
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecC----CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGD----NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGD----n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
+.+++++.++.+++.|+++.++|+. ...++..+.+..||.... ..++.|....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f-----~~i~~~d~~~------------------ 171 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN-----PVIFAGDKPG------------------ 171 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe-----eEEECCCCCC------------------
Confidence 4555999999999999999999998 777999999999996321 1222222110
Q ss_pred EEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 605 CVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
...| +|. ..+++.| ++.|+||..||..+-++|++-
T Consensus 172 ----~~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 172 ----QYQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred ----CCCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 0112 232 2445544 578999999999999998753
No 104
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.15 E-value=0.015 Score=62.14 Aligned_cols=89 Identities=21% Similarity=0.267 Sum_probs=63.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC----CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD----NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD----n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
.+.+++++.++.+++.|+++.++||. ...|+..+.+..||...+. ...++.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---f~vil~gd~~------------------ 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---NPVIFAGDKP------------------ 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---eeEEEcCCCC------------------
Confidence 46788999999999999999999995 4679999999999942211 0122222110
Q ss_pred eEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
.-.+|.. .+++.| ++.++||..+|..|-++|++-
T Consensus 173 -------~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -------GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -------CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0134443 444444 588999999999999999875
No 105
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.09 E-value=0.031 Score=60.72 Aligned_cols=121 Identities=10% Similarity=0.175 Sum_probs=79.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+...-. .++.+.+.. .
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd-----~ii~~~d~~--------------------~ 163 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS-----VVLAAEDVY--------------------R 163 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc-----EEEecccCC--------------------C
Confidence 568999999999999999999999999999999999999864211 233332211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCc--HhhhhcccEEEcCCCchHHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGT--EVAKESSDIIILDDNFASVV 676 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt--~vAkeaaDiil~ddnf~sIv 676 (892)
.+-.|+-=...++.+.-..+.+.|+||..+|..|=+.|++-.. +..|. ......+|.++.+ ++.+.
T Consensus 164 ~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i-~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 164 GKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCV-AVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEE-EEecCCchhhhccCCEEeCC--HHHHH
Confidence 1122322223333333334679999999999999999998432 22222 2222347887654 55543
No 106
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.05 E-value=0.03 Score=60.29 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=66.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+..... ..++.+.+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~----d~ii~~~~~---------------------- 152 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP----DYNVTTDDV---------------------- 152 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC----ceEEccccC----------------------
Confidence 467899999999999999999999999999999999998864210 122222211
Q ss_pred eccCHhhHHHHHHHHHHcC----CeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKRG----DVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g----~vVa~tGDG~NDapALk~AdVG 648 (892)
.+..| +...+.+.+++.| +.+.|+||..+|..|=+.|++-
T Consensus 153 ~~~KP-~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 153 PAGRP-APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred CCCCC-CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 01123 2223344444433 4599999999999999999964
No 107
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.97 E-value=0.041 Score=59.23 Aligned_cols=120 Identities=15% Similarity=0.121 Sum_probs=80.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||...-. .++.+.+.. .
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd-----~iv~~~~~~--------------------~ 162 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ-----AVIIGSECE--------------------H 162 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc-----EEEecCcCC--------------------C
Confidence 468899999999999999999999999999999999999864211 233332211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEe---ecCCCcHhhhhcccEEEcCCCchH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA---MGIQGTEVAKESSDIIILDDNFAS 674 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIA---mgi~gt~vAkeaaDiil~ddnf~s 674 (892)
.+-.|+-=....+.+.-..+.+.|+||..+|..|=++|++-.. -|....+.....+|+++.+ +..
T Consensus 163 ~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~--~~e 230 (248)
T PLN02770 163 AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD--YED 230 (248)
T ss_pred CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc--chh
Confidence 1223333333444444345679999999999999999987532 2211112234468888765 544
No 108
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.95 E-value=0.016 Score=58.27 Aligned_cols=105 Identities=15% Similarity=0.142 Sum_probs=74.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcC----CCCCcCCCC-CCceecchhhhhcCHHHHHHHhccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECG----ILTSEADAT-EPNIIEGKSFRALSETQREEIAGEDFG 602 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~G----I~~~~~~~~-~~~vi~G~~~~~l~~~e~~~i~~~~~~ 602 (892)
.++|+-++.++.|++.+|+++++|+--..-...+-...+ |..-+...+ ..+-.+|+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~------------------- 133 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ------------------- 133 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc-------------------
Confidence 579999999999999999999999987777777666554 221110000 00111221
Q ss_pred ceEEEeccCH--hhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 603 MICVMGRSSP--SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 603 ~~~V~aR~sP--~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
.-.+.-..+| .||...|+.|++..+.+-++|||+.|..|-|.+|+=+|-
T Consensus 134 h~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 134 HSIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred eeeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 1112222222 589999999999999999999999999999999998863
No 109
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=95.90 E-value=0.018 Score=59.55 Aligned_cols=94 Identities=20% Similarity=0.133 Sum_probs=67.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+...-. .++.+.+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~-----~~~~~~~--------------------- 157 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP-----VQIWMED--------------------- 157 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC-----EEEeecC---------------------
Confidence 34567778999999999999999999999999999999999863211 1222111
Q ss_pred EEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcC
Q 043305 606 VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEA 645 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~A 645 (892)
+..+-.|+--..+.+.+.-..+.+.|+||+.+|..|-+.|
T Consensus 158 ~~~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 158 CPPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CCCCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 1113345544555555554566799999999999887654
No 110
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.81 E-value=0.038 Score=55.35 Aligned_cols=102 Identities=22% Similarity=0.267 Sum_probs=68.7
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHH---HHHHHc---C--CCCCcCCCCCCceec-chhhhhcCHHHHHHH
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTAR---AIALEC---G--ILTSEADATEPNIIE-GKSFRALSETQREEI 596 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~---aIA~~~---G--I~~~~~~~~~~~vi~-G~~~~~l~~~e~~~i 596 (892)
+|.+.|+++++++++++.|+++.++||.....+. ....++ | +.. ..++.. |..+..+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~------g~li~~~g~~~~~~~------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH------GPVLLSPDRLFAALH------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC------ceEEEcCCcchhhhh-------
Confidence 5788999999999999999999999999998884 444452 2 321 112222 22111111
Q ss_pred hcccccceEEEeccCHh-hHHHHHHHHHH-----cCCeEEEeCCCCCChHhhhcCCee
Q 043305 597 AGEDFGMICVMGRSSPS-DKLLLVQALRK-----RGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 597 ~~~~~~~~~V~aR~sP~-dK~~lV~~Lq~-----~g~vVa~tGDG~NDapALk~AdVG 648 (892)
+ .+. ...|+ .|...++.+++ ....++..||+.+|+.+-++++|-
T Consensus 92 ------~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 ------R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ------c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 1 122 22344 48888888877 357888999999999999987653
No 111
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.70 E-value=0.023 Score=62.70 Aligned_cols=107 Identities=12% Similarity=0.010 Sum_probs=75.6
Q ss_pred ecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC-CcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 525 IKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT-SEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 525 i~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~-~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
..+++.+++.++++.+++.|+++.++||....++..+.+.+|+.. .-. .+.|.+- ..+.. +
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~------~i~~~~~--------~~~~~----~ 245 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD------DLIGRPP--------DMHFQ----R 245 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh------hhhCCcc--------hhhhc----c
Confidence 578999999999999999999999999999999999999998863 110 1111110 00000 0
Q ss_pred eEEEeccCHhhHHHHHHHHHH-cCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 604 ICVMGRSSPSDKLLLVQALRK-RGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~-~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
-.---+-.|+-+...++.+-. .-+.+.|+||..+|+.+-+.|++-.
T Consensus 246 ~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 246 EQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 000024456677777666533 2378999999999999999998864
No 112
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.56 E-value=0.087 Score=53.74 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=69.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHH---------------HHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQ---------------TARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~---------------TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e 592 (892)
.+.||+.+++++|++.|+++.++|..+.. ....+-+..|+.-. .++...... .
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-------~i~~~~~~~---~-- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-------GIYYCPHHP---E-- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-------eEEECCCCC---C--
Confidence 35799999999999999999999987621 11122233444210 000000000 0
Q ss_pred HHHHhcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecC-CCcH---hhhhcc--cEE
Q 043305 593 REEIAGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGI-QGTE---VAKESS--DII 666 (892)
Q Consensus 593 ~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi-~gt~---vAkeaa--Dii 666 (892)
...-..+-.|+--..+.+.+.-..+.+.|+||..+|..+-+.|++- +++. .|.. .....+ |.+
T Consensus 97 ----------~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~i 165 (181)
T PRK08942 97 ----------DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWV 165 (181)
T ss_pred ----------CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCcee
Confidence 0000012223333334444433457799999999999999999973 3332 2221 122335 777
Q ss_pred EcCCCchHHHHHH
Q 043305 667 ILDDNFASVVKVV 679 (892)
Q Consensus 667 l~ddnf~sIv~~i 679 (892)
+.+ +..+...+
T Consensus 166 i~~--l~el~~~l 176 (181)
T PRK08942 166 LDS--LADLPQAL 176 (181)
T ss_pred ecC--HHHHHHHH
Confidence 743 76666654
No 113
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.48 E-value=0.069 Score=62.86 Aligned_cols=122 Identities=16% Similarity=0.176 Sum_probs=81.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+...-. .++.+.+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~-----~i~~~d~v~--------------------- 383 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT-----ETFSIEQIN--------------------- 383 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc-----eeEecCCCC---------------------
Confidence 678999999999999999999999999999999999999864211 223222211
Q ss_pred eccCHhhHHHHHHHHHH-cCCeEEEeCCCCCChHhhhcCCee-EeecC-CCcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRK-RGDVVAVTGDGTNDAPALHEADIG-LAMGI-QGTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~-~g~vVa~tGDG~NDapALk~AdVG-IAmgi-~gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
....|+ .+...+++ .-+.+.++||..+|..|-+.|++- |.+.- .+.+.....+|+++.+ ++.+...+.
T Consensus 384 ~~~kP~---~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 454 (459)
T PRK06698 384 SLNKSD---LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILS 454 (459)
T ss_pred CCCCcH---HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHH
Confidence 112232 12222222 235699999999999999999973 33321 1222223458888754 777766553
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.45 E-value=0.082 Score=50.78 Aligned_cols=91 Identities=21% Similarity=0.166 Sum_probs=62.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCC--------HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDN--------IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGE 599 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn--------~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~ 599 (892)
++.|++.++++.|+++|+++.++|+.. .....++.+.+|+.... ..+.+ ..
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~-~~-------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV------LYACP-HC-------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE------EEECC-CC--------------
Confidence 678999999999999999999999998 77788888888875210 11111 00
Q ss_pred cccceEEEeccCHhhHHHHHHHHH-HcCCeEEEeCC-CCCChHhhhcCCe
Q 043305 600 DFGMICVMGRSSPSDKLLLVQALR-KRGDVVAVTGD-GTNDAPALHEADI 647 (892)
Q Consensus 600 ~~~~~~V~aR~sP~dK~~lV~~Lq-~~g~vVa~tGD-G~NDapALk~AdV 647 (892)
.+-.|+-=..+.+.++ -..+.+.|+|| -.+|..+-+.|++
T Consensus 84 --------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 84 --------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 0112222223334442 33467999999 5899999998876
No 115
>PRK11587 putative phosphatase; Provisional
Probab=95.42 E-value=0.09 Score=55.24 Aligned_cols=115 Identities=16% Similarity=0.188 Sum_probs=72.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+... ..++.+.... .
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------~~i~~~~~~~--------------------~ 136 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------EVFVTAERVK--------------------R 136 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc------cEEEEHHHhc--------------------C
Confidence 5689999999999999999999999887777766667776321 1223222110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-EeecCCCc-HhhhhcccEEEcC
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LAMGIQGT-EVAKESSDIIILD 669 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IAmgi~gt-~vAkeaaDiil~d 669 (892)
.+-.|+-=....+.+.-..+.+.|+||..+|..|=+.|++- +++. .+. ......+|+++.+
T Consensus 137 ~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 137 GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred CCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 11123222233333333357799999999999999999984 4443 221 2223457777653
No 116
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.30 E-value=0.069 Score=54.47 Aligned_cols=111 Identities=12% Similarity=0.057 Sum_probs=72.5
Q ss_pred EEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecC-CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHH
Q 043305 518 VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGD-NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEI 596 (892)
Q Consensus 518 ~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGD-n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i 596 (892)
......+-+-+++||+.+.++.|+++|+++.++|+- ....+..+-..+|+....... .+.+.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~-----------------~~~~~ 97 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV-----------------PMHSL 97 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc-----------------cHHHh
Confidence 345555556688999999999999999999999975 899999999999985211100 00000
Q ss_pred hcccccceEEEeccCHhhH--HHHHHHHHHc------CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 597 AGEDFGMICVMGRSSPSDK--LLLVQALRKR------GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 597 ~~~~~~~~~V~aR~sP~dK--~~lV~~Lq~~------g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
+ ...+.+...+..| ..+.+.+.+. -+.+.++||...|+.+-++|++-..
T Consensus 98 F-----d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 98 F-----DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred c-----eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 0 1112222111122 2334444432 3689999999999999999988654
No 117
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.28 E-value=0.04 Score=56.81 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=64.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+++++|++.|+++.++|+-+...+..+.+..|+...-. .++.+.+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd-----~i~~s~~~---------------------- 144 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD-----AVLSADAV---------------------- 144 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh-----eeEehhhc----------------------
Confidence 578999999999999999999999999999999999999853211 12221111
Q ss_pred eccCHh--hHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPS--DKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~--dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
.+..|. -=..+.+.+.-.-+.+.++||+.+|..+-+.|++-
T Consensus 145 ~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 145 RAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 011232 11222233322346789999999999999988764
No 118
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.26 E-value=0.18 Score=52.49 Aligned_cols=145 Identities=19% Similarity=0.232 Sum_probs=93.1
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCC-----CCCceecchh---h------hhcCHHHHH
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADA-----TEPNIIEGKS---F------RALSETQRE 594 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~-----~~~~vi~G~~---~------~~l~~~e~~ 594 (892)
+-||+.++++.+++. ....++|--...-+.++|+-+|+....... +...+-++.. + ..++.+|+-
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 468899999888764 456667777888999999999996432210 0001111110 0 012233333
Q ss_pred HHhcccccceEEEeccCHhh---------------HHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCC-e-eEeecCC
Q 043305 595 EIAGEDFGMICVMGRSSPSD---------------KLLLVQALRKR---GDVVAVTGDGTNDAPALHEAD-I-GLAMGIQ 654 (892)
Q Consensus 595 ~i~~~~~~~~~V~aR~sP~d---------------K~~lV~~Lq~~---g~vVa~tGDG~NDapALk~Ad-V-GIAmgi~ 654 (892)
+.++ .+|.|.+|.. |.++++.+.+. ....+++||++.|..||+.+. - |+|+.-+
T Consensus 163 e~lD------e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFN 236 (315)
T COG4030 163 EKLD------ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFN 236 (315)
T ss_pred HHHH------HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEec
Confidence 3333 2455655654 44555554443 345688999999999999874 2 3666668
Q ss_pred CcHhhhhcccEEEcCCCchHHHHHHH
Q 043305 655 GTEVAKESSDIIILDDNFASVVKVVR 680 (892)
Q Consensus 655 gt~vAkeaaDiil~ddnf~sIv~~i~ 680 (892)
|.+-|-.-||+.+...+..+...+|.
T Consensus 237 GNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 237 GNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred CCcccccccceEEeccchhhhhHHHH
Confidence 99999999999999888888777773
No 119
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=94.96 E-value=0.1 Score=54.59 Aligned_cols=93 Identities=16% Similarity=0.220 Sum_probs=64.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|++.|+++.++|+-+...+....+.+|+...-. .++.+.+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~-----~i~~~~~~---------------------- 146 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD-----AVITSEEE---------------------- 146 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc-----EEEEeccC----------------------
Confidence 578999999999999999999999998888888888888853211 12222111
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCC-CChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGT-NDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~-NDapALk~AdVG 648 (892)
.+..|.. ..+.+.+++. .+.+.++||.. +|..+=+.|++-
T Consensus 147 ~~~KP~~-~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 147 GVEKPHP-KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCCCCCH-HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 1222321 1233344443 45799999998 999999999874
No 120
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=94.89 E-value=0.042 Score=55.71 Aligned_cols=91 Identities=12% Similarity=0.198 Sum_probs=59.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++.|+++|+++.++|+.. .+..+.+..|+...-. .++.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~-----~~~~~~~~---------------------- 137 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFD-----AIVDPAEI---------------------- 137 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCc-----EEEehhhc----------------------
Confidence 578999999999999999999999743 2456677788753211 22222111
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVG 648 (892)
.+..|. ...+-+.+++. .+.+.|+||..+|..+-+.|++-
T Consensus 138 ~~~kp~-p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 138 KKGKPD-PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred CCCCCC-hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 112231 22223334433 35689999999999999999874
No 121
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=94.89 E-value=0.12 Score=59.11 Aligned_cols=120 Identities=13% Similarity=0.176 Sum_probs=79.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+++|+++.++|+-....+..+-+..||...-. .++.+.+.. .
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd-----~Iv~sddv~--------------------~ 270 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS-----VIVAAEDVY--------------------R 270 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce-----EEEecCcCC--------------------C
Confidence 467999999999999999999999999999999999999864211 222222211 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCc-Hhh-hhcccEEEcCCCchHH
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGT-EVA-KESSDIIILDDNFASV 675 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt-~vA-keaaDiil~ddnf~sI 675 (892)
..-.|+-=...++.+.-..+.+.|+||..+|+.|-+.|++-. +|..+. ... ...+|+++.+ +..+
T Consensus 271 ~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~-IgV~~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 271 GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE-EEECCCCChhHhcCCCEEECC--HHHH
Confidence 111222223334444434678999999999999999999853 343332 222 2348888754 5544
No 122
>PLN02580 trehalose-phosphatase
Probab=94.57 E-value=0.38 Score=54.97 Aligned_cols=62 Identities=19% Similarity=0.211 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHc-C-----C-eEEEeCCCCCChHhhhc-----CCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 613 SDKLLLVQALRKR-G-----D-VVAVTGDGTNDAPALHE-----ADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g-----~-vVa~tGDG~NDapALk~-----AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
-+|...|+.|.+. | . .+.++||+.||-.|++. +++||+|| +|... -.|++-|.+ -..+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHH
Confidence 4999999888764 2 2 25899999999999995 69999999 44432 256787765 55555444
No 123
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.51 E-value=0.2 Score=55.24 Aligned_cols=119 Identities=16% Similarity=0.118 Sum_probs=72.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+-+......+-+..++..... ...++.+.+.. .
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~~~--------------------~ 200 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQ---GLDVFAGDDVP--------------------K 200 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccC---ceEEEeccccC--------------------C
Confidence 578999999999999999999999998888877666553221100 00111221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcH--hhhhcccEEEcC
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE--VAKESSDIIILD 669 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~--vAkeaaDiil~d 669 (892)
.+-.|+-=..+.+.+.-..+.+.|+||+.+|..|-++|++....-..|.. .....+|+++.+
T Consensus 201 ~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 201 KKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred CCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 11222222333333433356799999999999999999987554323321 112357888743
No 124
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=94.45 E-value=0.15 Score=53.18 Aligned_cols=121 Identities=10% Similarity=0.066 Sum_probs=74.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
+++||+.+.++.|++. +++.++|+-....+..+.++.|+...-+ .++.+.+.. .
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd-----~i~~~~~~~--------------------~ 150 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD-----DIFVSEDAG--------------------I 150 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC-----EEEEcCccC--------------------C
Confidence 5789999999999999 9999999999999999999999864211 111111100 0
Q ss_pred eccCHhhHHHHHHHH-HHcCCeEEEeCCCC-CChHhhhcCCe---eEeecCCCcHhhhhcccEEEcCCCchHHHH
Q 043305 608 GRSSPSDKLLLVQAL-RKRGDVVAVTGDGT-NDAPALHEADI---GLAMGIQGTEVAKESSDIIILDDNFASVVK 677 (892)
Q Consensus 608 aR~sP~dK~~lV~~L-q~~g~vVa~tGDG~-NDapALk~AdV---GIAmgi~gt~vAkeaaDiil~ddnf~sIv~ 677 (892)
.+-.|+-=...++.+ .-..+.+.++||.. +|..+=+.+++ ++.-| ..++.....+|.++.+ ++.+..
T Consensus 151 ~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~-~~~~~~~~~~~~~~~~--~~el~~ 222 (224)
T TIGR02254 151 QKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPD-MHPNPDDIIPTYEIRS--LEELYE 222 (224)
T ss_pred CCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCC-CCCCCCCCCCceEECC--HHHHHh
Confidence 011121112223333 22235699999998 89999999996 33333 1222223456777643 655544
No 125
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.43 E-value=0.11 Score=52.38 Aligned_cols=94 Identities=18% Similarity=0.213 Sum_probs=61.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.|++.+.++.|+++|+++.++|+-.... ..+..++|+...-. .++.+.+.. .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~-----~i~~~~~~~--------------------~ 138 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD-----VVIFSGDVG--------------------R 138 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC-----EEEEcCCCC--------------------C
Confidence 678999999999999999999999988877 55555588753211 122221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI 647 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV 647 (892)
..-.|+-=..+.+.+.-..+.+.++||...|..+-+++++
T Consensus 139 ~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 139 GKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 1112222233333333335678999999999999888876
No 126
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.12 E-value=0.078 Score=53.72 Aligned_cols=91 Identities=14% Similarity=0.196 Sum_probs=60.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|+- ..+..+-+.+|+...-. .++.+...
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~-----~v~~~~~~---------------------- 138 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFD-----AIVDADEV---------------------- 138 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCC-----EeeehhhC----------------------
Confidence 68999999999999999999999986 66777778888753211 11111110
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVG 648 (892)
.+..|... .+-+.+++. .+.+.++||+.+|..+=++|++-
T Consensus 139 ~~~kp~~~-~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 139 KEGKPHPE-TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CCCCCChH-HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 01223211 122333333 35688999999999999999874
No 127
>PRK06769 hypothetical protein; Validated
Probab=94.06 E-value=0.13 Score=52.22 Aligned_cols=95 Identities=15% Similarity=0.025 Sum_probs=57.5
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHH--------HHHHHHHHcCCCCCcCCCCCCceec----chhhhhcCHHHHHHH
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQ--------TARAIALECGILTSEADATEPNIIE----GKSFRALSETQREEI 596 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~--------TA~aIA~~~GI~~~~~~~~~~~vi~----G~~~~~l~~~e~~~i 596 (892)
+-||+++.++.|++.|+++.++|+.... .....-+..|+.. .+.. +.+.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~--------~~~~~~~~~~~~----------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD--------IYLCPHKHGDGC----------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE--------EEECcCCCCCCC-----------
Confidence 6899999999999999999999987631 1222233444431 0000 0000
Q ss_pred hcccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 597 AGEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 597 ~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
-..+-.|+-=..+.+.+.-.-+.+.|+||..+|..|=++|++-...
T Consensus 90 ---------~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 90 ---------ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 0012223222333333333346799999999999999999876543
No 128
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.00 E-value=0.14 Score=51.81 Aligned_cols=84 Identities=24% Similarity=0.254 Sum_probs=59.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCC-HHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDN-IQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn-~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+...
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------------ 86 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------------ 86 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------------
Confidence 568999999999999999999999988 6777888888876410
Q ss_pred EeccCHhhHHHHHHHHHH---cCCeEEEeCCCC-CChHhhhcCCee
Q 043305 607 MGRSSPSDKLLLVQALRK---RGDVVAVTGDGT-NDAPALHEADIG 648 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~---~g~vVa~tGDG~-NDapALk~AdVG 648 (892)
.....|.. ..+-..+++ ..+.+.|+||.. .|..+=+.|++-
T Consensus 87 ~~~~KP~p-~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 87 PHAVKPPG-CAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred cCCCCCCh-HHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 00112211 122233333 245699999998 799999999873
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=93.99 E-value=0.28 Score=51.47 Aligned_cols=121 Identities=17% Similarity=0.208 Sum_probs=75.5
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|+ +|+++.++|......+...-+..|+...-. .++.+.+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd-----~v~~~~~~---------------------- 146 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD-----LLVISEQV---------------------- 146 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC-----EEEEECcc----------------------
Confidence 46899999999999 689999999998888888888888753111 11111110
Q ss_pred eccCHhhHHHHHHHHHHcC----CeEEEeCCCC-CChHhhhcCCeeE-eecCCCcH-hhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKRG----DVVAVTGDGT-NDAPALHEADIGL-AMGIQGTE-VAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g----~vVa~tGDG~-NDapALk~AdVGI-Amgi~gt~-vAkeaaDiil~ddnf~sIv~~i 679 (892)
....| +..-+-+.+++.| +.+.++||.. +|..+=+.|++-. .....+.. .....+|+++.+ +..+...+
T Consensus 147 ~~~KP-~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 147 GVAKP-DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred CCCCC-CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 01123 2222333344332 5799999998 7999999999753 32211211 112247887754 77776554
No 130
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=93.94 E-value=0.13 Score=54.59 Aligned_cols=96 Identities=9% Similarity=0.049 Sum_probs=65.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.|+++.++|.-+...+...-+..|+...-. .++.+.++
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd-----~iv~s~~~---------------------- 145 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD-----LLLSTHTF---------------------- 145 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC-----EEEEeeeC----------------------
Confidence 578999999999999999999999998888888878788753211 12211111
Q ss_pred eccCH--hhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 608 GRSSP--SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 608 aR~sP--~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
.+..| +-=..+.+.+.-..+.+.++||..+|..+=+.|++...
T Consensus 146 ~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~ 190 (224)
T PRK14988 146 GYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYC 190 (224)
T ss_pred CCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEE
Confidence 11223 21122222222234679999999999999999999643
No 131
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.88 E-value=0.45 Score=49.56 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=32.7
Q ss_pred hHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 532 SVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 532 ~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
.+.+.+..++++|++|+.+|.-....-...=+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4567899999999999999998888888888889887
No 132
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.79 E-value=0.073 Score=52.62 Aligned_cols=92 Identities=13% Similarity=-0.018 Sum_probs=64.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ...++.+.+..
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~----f~~i~~~~d~~--------------------- 98 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF----GYRRLFRDECV--------------------- 98 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE----eeeEEECcccc---------------------
Confidence 57999999999999 57999999999999999999998874210 01122222111
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
+..|. +.+.++.. .+.+.++||..+|..|-++|.|-|.
T Consensus 99 -~~KP~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 99 -FVKGK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -ccCCe----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 11222 44444443 4689999999999999888866653
No 133
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=93.75 E-value=0.094 Score=51.81 Aligned_cols=97 Identities=16% Similarity=0.229 Sum_probs=67.3
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
.++.|++.+.++.|++.|+++.++|+-.........+..|+...-. .++.+.+...
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~-----~i~~~~~~~~------------------- 131 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFD-----EIISSDDVGS------------------- 131 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCS-----EEEEGGGSSS-------------------
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccc-----cccccchhhh-------------------
Confidence 3678999999999999999999999999999999999999873211 1222211110
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
.+-.|+-=..+++.+.-..+.+.++||+..|..+-++|++-
T Consensus 132 -~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 132 -RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp -STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred -hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 01112222333333433457899999999999999998764
No 134
>PLN02940 riboflavin kinase
Probab=93.58 E-value=0.21 Score=57.34 Aligned_cols=117 Identities=18% Similarity=0.118 Sum_probs=71.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHH-HcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIAL-ECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~-~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+...- ..++.+.+..
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F-----d~ii~~d~v~-------------------- 147 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF-----SVIVGGDEVE-------------------- 147 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC-----CEEEehhhcC--------------------
Confidence 467999999999999999999999998888777655 56774321 1222222110
Q ss_pred EeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCC--cHhhhhcccEEEcC
Q 043305 607 MGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQG--TEVAKESSDIIILD 669 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~g--t~vAkeaaDiil~d 669 (892)
...-.|+-=...++.+.-..+.+.++||+.+|..|-+.|++....=..+ .+.....+|.++.+
T Consensus 148 ~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 148 KGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 0111222222233333323567999999999999999999863221122 12233456666543
No 135
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=93.48 E-value=0.4 Score=60.51 Aligned_cols=51 Identities=18% Similarity=0.115 Sum_probs=38.2
Q ss_pred CCcEEEEEEEecCCCchhHHHHHHHH-HhCCCEEEEEecCCHHHHHHHHHHc
Q 043305 515 DDLVLLAIVGIKDPCRPSVKDAIRLC-RIAGVKVRMVTGDNIQTARAIALEC 565 (892)
Q Consensus 515 ~~l~~lGlvgi~DplR~~v~~aI~~l-~~AGI~v~mvTGDn~~TA~aIA~~~ 565 (892)
-|.||+-.....-.+-+++.+++++| ++.|+.|.++||....+....-..+
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 34455533323335668999999996 8889999999999999998877554
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.17 E-value=0.42 Score=52.12 Aligned_cols=87 Identities=16% Similarity=0.136 Sum_probs=60.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHH---HHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhccccc
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQT---ARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFG 602 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~T---A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~ 602 (892)
..++-||+.+.++.+++.|+++.++|+..... +...-+..|+.....
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~------------------------------ 165 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE------------------------------ 165 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc------------------------------
Confidence 34678999999999999999999999977433 345556678753211
Q ss_pred ceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhh
Q 043305 603 MICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALH 643 (892)
Q Consensus 603 ~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk 643 (892)
-.++.|-....|..-.+.+.+.-.+|+++||-.+|.....
T Consensus 166 -d~lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 166 -EHLLLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred -ceEEeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 1233332223455556666666678999999999986543
No 137
>PLN02811 hydrolase
Probab=93.00 E-value=0.24 Score=52.17 Aligned_cols=97 Identities=14% Similarity=0.243 Sum_probs=57.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHH-HHHHcCCCCCcCCCCCCceecch--hhhhcCHHHHHHHhcccccce
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARA-IALECGILTSEADATEPNIIEGK--SFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~a-IA~~~GI~~~~~~~~~~~vi~G~--~~~~l~~~e~~~i~~~~~~~~ 604 (892)
++.||+.+.++.|++.|+++.++||-....... ..+..|+.... ..++.+. +..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f-----~~i~~~~~~~~~------------------ 134 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM-----HHVVTGDDPEVK------------------ 134 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC-----CEEEECChhhcc------------------
Confidence 568999999999999999999999877654332 21112332100 0111111 000
Q ss_pred EEEeccCHhhHHHHHHHHH---HcCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 605 CVMGRSSPSDKLLLVQALR---KRGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 605 ~V~aR~sP~dK~~lV~~Lq---~~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
...-.|+-=...++.+. -..+.+.|+||...|+.|-+.|++-.
T Consensus 135 --~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 135 --QGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred --CCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 00112222223333332 12367999999999999999999854
No 138
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.95 E-value=0.29 Score=52.24 Aligned_cols=112 Identities=21% Similarity=0.280 Sum_probs=73.9
Q ss_pred CCchhHHHHHHHH--HhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC-CCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 528 PCRPSVKDAIRLC--RIAGVKVRMVTGDNIQTARAIALECGILTSEAD-ATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 528 plR~~v~~aI~~l--~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~-~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
|+.|+.+++++.| ++.|+.+.++|--|..--..|=+.-|+...-.. ..+...++..-. -.+.+.+ .
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~--------l~v~pyh--~- 139 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGR--------LRVRPYH--S- 139 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCce--------EEEeCcc--C-
Confidence 7789999999999 568999999999999999999999998642110 001111111100 0011110 1
Q ss_pred EEEeccCH-hhHHHHHHHHHHc----C---CeEEEeCCCCCChH-hh--hcCCeeEe
Q 043305 605 CVMGRSSP-SDKLLLVQALRKR----G---DVVAVTGDGTNDAP-AL--HEADIGLA 650 (892)
Q Consensus 605 ~V~aR~sP-~dK~~lV~~Lq~~----g---~vVa~tGDG~NDap-AL--k~AdVGIA 650 (892)
+-+.+|.| .=|..+++.+++. | ..|.++|||.||-. ++ +.+|+-++
T Consensus 140 h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 140 HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFP 196 (234)
T ss_pred CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEec
Confidence 22446655 4799999988875 4 68999999999965 43 35666553
No 139
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.94 E-value=0.17 Score=54.35 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=51.0
Q ss_pred EEeccCHhhHHHHHHHHHHc----CCeEEEeCCCCCChHhhhcC--------CeeEeecCCCcHhhhhcccEEEcCCCch
Q 043305 606 VMGRSSPSDKLLLVQALRKR----GDVVAVTGDGTNDAPALHEA--------DIGLAMGIQGTEVAKESSDIIILDDNFA 673 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~----g~vVa~tGDG~NDapALk~A--------dVGIAmgi~gt~vAkeaaDiil~ddnf~ 673 (892)
+-.+..+.+|...++.+.+. ...++++||+.||.+|++.+ ..|++|+ .| ..+..|++++.+ ..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~~--~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLTG--PQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCCC--HH
Confidence 34455677999888887664 35799999999999999999 5888885 33 245678898864 66
Q ss_pred HHHHHH
Q 043305 674 SVVKVV 679 (892)
Q Consensus 674 sIv~~i 679 (892)
.+...+
T Consensus 234 ~v~~~L 239 (244)
T TIGR00685 234 QVLEFL 239 (244)
T ss_pred HHHHHH
Confidence 665555
No 140
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.90 E-value=0.93 Score=48.51 Aligned_cols=46 Identities=13% Similarity=0.025 Sum_probs=35.9
Q ss_pred EecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHH--HHHHHcCCCC
Q 043305 524 GIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTAR--AIALECGILT 569 (892)
Q Consensus 524 gi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~--aIA~~~GI~~ 569 (892)
.-.+.+-|++.++++.|+++|+++.++|.-....+. ...++.|+..
T Consensus 20 ~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 20 IDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred ccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 335677899999999999999999999995544433 4567788863
No 141
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=92.62 E-value=0.53 Score=47.81 Aligned_cols=26 Identities=27% Similarity=0.307 Sum_probs=23.9
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDN 554 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn 554 (892)
+.||+.++++.|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
No 142
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=92.20 E-value=0.41 Score=47.11 Aligned_cols=96 Identities=21% Similarity=0.223 Sum_probs=58.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCH---------------HHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNI---------------QTARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~---------------~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e 592 (892)
++.||+.++++.|++.|+++.++|.... ..+..+.+.+|+.... ... .....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~-~~~~~------ 93 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG------VLF-CPHHP------ 93 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE------EEE-CCCCC------
Confidence 4689999999999999999999998662 3455666777775210 000 00000
Q ss_pred HHHHhcccccceEEEeccCHhhHHHHHHHHHHc---CCeEEEeCCCCCChHhhhcCCee
Q 043305 593 REEIAGEDFGMICVMGRSSPSDKLLLVQALRKR---GDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 593 ~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~NDapALk~AdVG 648 (892)
.-..-. ..|. ...+-..+++. .+.+.++||...|..+-+.|++-
T Consensus 94 ----------~~~~~~-~KP~-~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 94 ----------ADNCSC-RKPK-PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ----------CCCCCC-CCCC-HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000000 1232 11223333333 36799999999999998888764
No 143
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.09 E-value=0.39 Score=46.31 Aligned_cols=39 Identities=8% Similarity=0.103 Sum_probs=34.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC-CHHHHHHHHHHcC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD-NIQTARAIALECG 566 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD-n~~TA~aIA~~~G 566 (892)
++.+|+.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777767666
No 144
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.82 E-value=0.74 Score=46.64 Aligned_cols=81 Identities=17% Similarity=0.167 Sum_probs=60.5
Q ss_pred cCCCchhHHHHHHHHHhCCC--EEEEEecC-------CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHH
Q 043305 526 KDPCRPSVKDAIRLCRIAGV--KVRMVTGD-------NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEI 596 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI--~v~mvTGD-------n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i 596 (892)
++.+-|++.+.+++|++.+. +|.++|-- +...|.++++.+||.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp---------------------------- 108 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP---------------------------- 108 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----------------------------
Confidence 45678999999999999987 49999986 488999999999974
Q ss_pred hcccccceEEEeccCHhhHHHHHHHHHHc-----CCeEEEeCCC-CCChHh
Q 043305 597 AGEDFGMICVMGRSSPSDKLLLVQALRKR-----GDVVAVTGDG-TNDAPA 641 (892)
Q Consensus 597 ~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~-----g~vVa~tGDG-~NDapA 641 (892)
+-.+....|.-..++.+.++.+ -+.++|+||- ..|.-+
T Consensus 109 -------vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 109 -------VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred -------EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 1122334576666778888765 5679999996 335433
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.62 E-value=0.85 Score=48.54 Aligned_cols=87 Identities=16% Similarity=0.173 Sum_probs=56.1
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHH---HHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTAR---AIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~---aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
-|.-|++.++++.+++.|++|+++||....... .--++.|+..- ..+++.+..-.
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-----~~LiLR~~~d~----------------- 176 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-----KHLILRGLEDS----------------- 176 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-----CeeeecCCCCC-----------------
Confidence 478899999999999999999999999976522 22244565421 11222221000
Q ss_pred eEEEeccCHhhHHHHHHHHHHcC-CeEEEeCCCCCCh
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDA 639 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDa 639 (892)
....-.-|...-+.+.+.| .+++.+||-.+|.
T Consensus 177 ----~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 177 ----NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred ----CchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 0001122667776777665 5788899999887
No 146
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=91.29 E-value=0.49 Score=48.80 Aligned_cols=91 Identities=16% Similarity=0.231 Sum_probs=58.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++-||+.++++.|+++|+++.++|+-.. ....+.+.+|+...-. .++.+.+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~~fd-----~i~~s~~~---------------------- 156 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGLLEYFD-----FVVTSYEV---------------------- 156 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCcHHhcc-----eEEeeccc----------------------
Confidence 5679999999999999999999997554 3466777777742211 11111110
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCCC-CChHhhhcCCe
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDGT-NDAPALHEADI 647 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG~-NDapALk~AdV 647 (892)
....|. ...+-+.+++. .+.+.++||+. +|..+=++|++
T Consensus 157 ~~~KP~-~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 157 GAEKPD-PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CCCCCC-HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 011121 12233334443 46799999997 89998888865
No 147
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=91.18 E-value=0.5 Score=46.40 Aligned_cols=38 Identities=11% Similarity=0.282 Sum_probs=33.3
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC 565 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~ 565 (892)
+..+|+.+.++.|++.|+++.++|+-....+....+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 34579999999999999999999999999888877765
No 148
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.12 E-value=0.48 Score=53.74 Aligned_cols=97 Identities=24% Similarity=0.175 Sum_probs=58.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC---------------CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD---------------NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD---------------n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e 592 (892)
++.|++.++++.|+++|+++.++|.- ....+..+.+..|+.-. ...+... .. ++
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd------~i~i~~~-~~--sd-- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD------EVLICPH-FP--ED-- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee------eEEEeCC-cC--cc--
Confidence 67999999999999999999999982 13345556666666310 0111100 00 00
Q ss_pred HHHHhcccccceEEEeccCHhhHHHHHHHH-HHc---CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 593 REEIAGEDFGMICVMGRSSPSDKLLLVQAL-RKR---GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 593 ~~~i~~~~~~~~~V~aR~sP~dK~~lV~~L-q~~---g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
...+| .|. -.++..+ ++. .+.+.|+||+.+|..+=+.|++-..
T Consensus 99 ------------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 ------------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ------------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 222 2233333 222 3679999999999999999988643
No 149
>PLN03017 trehalose-phosphatase
Probab=90.59 E-value=2.8 Score=47.73 Aligned_cols=46 Identities=20% Similarity=0.187 Sum_probs=35.6
Q ss_pred CcEEEEEEEecC--CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHH
Q 043305 516 DLVLLAIVGIKD--PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIA 562 (892)
Q Consensus 516 ~l~~lGlvgi~D--plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA 562 (892)
|.||+-++.-.| .+-++..++|+++. .|++|.++||........+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 345554443222 36789999999999 78999999999999999884
No 150
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=90.00 E-value=0.63 Score=46.80 Aligned_cols=97 Identities=23% Similarity=0.193 Sum_probs=57.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecC---------------CHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHH
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGD---------------NIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQ 592 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGD---------------n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e 592 (892)
++-|++.+++++|++.|+++.++|-- ....+..+.++.|+.-. ..++ +..+. ++
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd------~ii~-~~~~~--~~-- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD------DVLI-CPHFP--DD-- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee------EEEE-CCCCC--CC--
Confidence 45789999999999999999999974 23455666666676410 0111 10000 00
Q ss_pred HHHHhcccccceEEEeccCHhhHHHHHH-HHHHc---CCeEEEeCCCCCChHhhhcCCeeEe
Q 043305 593 REEIAGEDFGMICVMGRSSPSDKLLLVQ-ALRKR---GDVVAVTGDGTNDAPALHEADIGLA 650 (892)
Q Consensus 593 ~~~i~~~~~~~~~V~aR~sP~dK~~lV~-~Lq~~---g~vVa~tGDG~NDapALk~AdVGIA 650 (892)
.+- ...|. ..++. .+++. .+.+.|+||+.+|..+-+.|++-..
T Consensus 98 ------------~~~-~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------------NCD-CRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------------CCC-CCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 000 01222 22222 22332 3569999999999999999987643
No 151
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.00 E-value=1.1 Score=45.20 Aligned_cols=40 Identities=13% Similarity=0.119 Sum_probs=31.7
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCH------------HHHHHHHHHcCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNI------------QTARAIALECGIL 568 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~------------~TA~aIA~~~GI~ 568 (892)
+-||+.++++.|+++|+++.++|.-.. ..+..+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 348999999999999999999996443 2455677778874
No 152
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=89.69 E-value=0.85 Score=48.34 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=64.5
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcC---CCCCcCCCCCCceecchhhhhcCHHHHHHHhccccc
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECG---ILTSEADATEPNIIEGKSFRALSETQREEIAGEDFG 602 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~G---I~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~ 602 (892)
+-++.||+.+++++++++|+++.++|..+....+.+-+..+ +... +++ .+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~---------f~~-------------~f----- 145 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY---------FSG-------------YF----- 145 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh---------cce-------------EE-----
Confidence 34789999999999999999999999998887777665542 2110 000 00
Q ss_pred ceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 603 MICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 603 ~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
...+...-.|+-=..+.+.+.-..+.+.++||...|+.|=++|++-...
T Consensus 146 d~~~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 146 DTTVGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred EeCcccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 0011122233333334444433346799999999999999999986543
No 153
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=88.95 E-value=0.98 Score=50.60 Aligned_cols=90 Identities=9% Similarity=0.054 Sum_probs=65.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH----cCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE----CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~----~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
++.+++.++++.|++.||++.++|.-+...|..+-+. .|+...-
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------------- 78 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------------- 78 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe--------------------------------
Confidence 4589999999999999999999999999999998887 6664210
Q ss_pred eEEEeccCHhhHHHHHHHH-HHc---CCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 604 ICVMGRSSPSDKLLLVQAL-RKR---GDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~L-q~~---g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
..+ +.++..|...++.+ ++. -+.+.++||...|..+.+.+..++.+
T Consensus 79 ~~~--~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 79 DAR--SINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred eEE--EEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 011 11122344334333 322 47899999999999999998887644
No 154
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=88.24 E-value=1.4 Score=57.28 Aligned_cols=120 Identities=18% Similarity=0.215 Sum_probs=76.4
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEe
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~a 608 (892)
+.||+.+.++.|+++|+++.++|+-....+..+-+..|+.... ...++.+.+... .
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~----Fd~iv~~~~~~~--------------------~ 217 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM----FDAIVSADAFEN--------------------L 217 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH----CCEEEECccccc--------------------C
Confidence 5689999999999999999999999999999888889985110 012222221110 1
Q ss_pred ccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee-Eee--cCCCcHhhhhcccEEEcCCCchH
Q 043305 609 RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG-LAM--GIQGTEVAKESSDIIILDDNFAS 674 (892)
Q Consensus 609 R~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG-IAm--gi~gt~vAkeaaDiil~ddnf~s 674 (892)
.-.|+-=....+.+.-..+.+.++||..+|+.|-+.|++- |.+ |....+.....+|+++.+ +..
T Consensus 218 KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~--l~e 284 (1057)
T PLN02919 218 KPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD--IGN 284 (1057)
T ss_pred CCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC--hHH
Confidence 1122222233333333356799999999999999999873 222 211122344567888755 544
No 155
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=87.41 E-value=0.4 Score=50.25 Aligned_cols=97 Identities=10% Similarity=0.102 Sum_probs=61.8
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||++++++.| ++++.++|+.....+...-+..|+...-. ..++.+.+...
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~----~~v~~~~~~~~-------------------- 140 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP----DKLFSGYDIQR-------------------- 140 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc----ceEeeHHhcCC--------------------
Confidence 4568999999998 49999999999888888777888853210 12222221110
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEee
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAM 651 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAm 651 (892)
.+-.|+-=....+.+.-..+.++++||..+|..+=++|++....
T Consensus 141 ~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 141 WKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 01122222222333322235699999999999999999977643
No 156
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=87.39 E-value=0.74 Score=47.85 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=54.9
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHH--HHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQT--ARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMIC 605 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~T--A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~ 605 (892)
++.|++.+.++.|++.|+++.++|...... ........|+...-. .++.+.+.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd-----~v~~s~~~-------------------- 148 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFD-----AVVESCLE-------------------- 148 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCC-----EEEEeeec--------------------
Confidence 678999999999999999999999865433 222222233321100 01100000
Q ss_pred EEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 606 VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 606 V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
-..+-.|+-=..+.+.+.-..+.+.|+||...|..+=++|++-
T Consensus 149 ~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 149 GLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 0011223222222333332346688899999999999999874
No 157
>PLN02423 phosphomannomutase
Probab=87.30 E-value=2.9 Score=44.99 Aligned_cols=39 Identities=31% Similarity=0.351 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHHcCCeEEEeCC----CCCChHhhhc-CCeeEeec
Q 043305 613 SDKLLLVQALRKRGDVVAVTGD----GTNDAPALHE-ADIGLAMG 652 (892)
Q Consensus 613 ~dK~~lV~~Lq~~g~vVa~tGD----G~NDapALk~-AdVGIAmg 652 (892)
-+|..-++.|+ ..+.|++.|| |-||.+||+. -=+|+++-
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 47888888888 6778899999 8999999996 66777763
No 158
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=87.17 E-value=2.3 Score=42.79 Aligned_cols=108 Identities=17% Similarity=0.209 Sum_probs=74.3
Q ss_pred HHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHH
Q 043305 478 IEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQT 557 (892)
Q Consensus 478 i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~T 557 (892)
.+.+...|+|++.+- ++. |+++.= ....-|++++=+.+++.+|+++.++|--+...
T Consensus 20 ~~~L~~~Gikgvi~D---lDN-------------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~R 75 (175)
T COG2179 20 PDILKAHGIKGVILD---LDN-------------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESR 75 (175)
T ss_pred HHHHHHcCCcEEEEe---ccC-------------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHH
Confidence 467888999998763 332 111111 12457899999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHc---CCeEEEeCC
Q 043305 558 ARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR---GDVVAVTGD 634 (892)
Q Consensus 558 A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~---g~vVa~tGD 634 (892)
+...+..+|+.- +.-. ..|.- ..+-+++++. -+.|+|+||
T Consensus 76 V~~~~~~l~v~f--------i~~A----------------------------~KP~~-~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 76 VARAAEKLGVPF--------IYRA----------------------------KKPFG-RAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred HHhhhhhcCCce--------eecc----------------------------cCccH-HHHHHHHHHcCCChhHEEEEcc
Confidence 999999999862 1111 11222 3456666665 478999999
Q ss_pred C-CCChHhhhcCC
Q 043305 635 G-TNDAPALHEAD 646 (892)
Q Consensus 635 G-~NDapALk~Ad 646 (892)
- ..|.-+=+.|+
T Consensus 119 qL~TDVlggnr~G 131 (175)
T COG2179 119 QLFTDVLGGNRAG 131 (175)
T ss_pred hhhhhhhcccccC
Confidence 7 44775555553
No 159
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=86.18 E-value=7.9 Score=41.91 Aligned_cols=40 Identities=28% Similarity=0.296 Sum_probs=33.0
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHH---HHHHHHHcCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQT---ARAIALECGIL 568 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~T---A~aIA~~~GI~ 568 (892)
+=|++.++|++|+++|++++++||....+ .....+++|+.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 77899999999999999999999977665 44455567875
No 160
>PLN02645 phosphoglycolate phosphatase
Probab=82.92 E-value=2.1 Score=47.81 Aligned_cols=43 Identities=19% Similarity=0.258 Sum_probs=36.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHH---HHcCCC
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIA---LECGIL 568 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA---~~~GI~ 568 (892)
.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 42 ~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 42 GDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 3455699999999999999999999999988877777 557764
No 161
>PHA02597 30.2 hypothetical protein; Provisional
Probab=81.23 E-value=4.2 Score=41.70 Aligned_cols=94 Identities=19% Similarity=0.157 Sum_probs=54.4
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.++.|++.+ +...+|.-+..+....-+..|+...... -| ...+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~----------~f-----------------~~i~~ 125 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG----------AF-----------------SEVLM 125 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC----------cc-----------------cEEEE
Confidence 46899999999999985 5666676444444434455565321000 00 01111
Q ss_pred eccCHhhHHHHHHHHHHcC-CeEEEeCCCCCChHhhhcC--CeeE
Q 043305 608 GRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDAPALHEA--DIGL 649 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDapALk~A--dVGI 649 (892)
++..+..+..+...+++.| +.++++||..+|..|-++| ++-.
T Consensus 126 ~~~~~~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 126 CGHDESKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred eccCcccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 2222111222333444444 4588999999999999999 8853
No 162
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=80.44 E-value=3 Score=43.05 Aligned_cols=95 Identities=17% Similarity=0.140 Sum_probs=56.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH-cCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE-CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICV 606 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~-~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V 606 (892)
++.||+.++++.|+++|+++.++|.-+.......-.. .|+...- ..++...+
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f-----d~v~~s~~---------------------- 136 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA-----DHIYLSQD---------------------- 136 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc-----CEEEEecc----------------------
Confidence 4789999999999999999999998765544332211 2222100 01111110
Q ss_pred EeccCH--hhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 607 MGRSSP--SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 607 ~aR~sP--~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
+....| +==..+.+.+.-..+.+.++||...|..+=++|++-.
T Consensus 137 ~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 137 LGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 011122 2212223333323467899999999999999988753
No 163
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=80.22 E-value=14 Score=39.05 Aligned_cols=113 Identities=22% Similarity=0.261 Sum_probs=72.5
Q ss_pred CCchhHHHHHHHHHhCCC-EEEEEecCCHHHHHHHHHHcCCCCC-------cC--CCCCCceecchhhhhcCHHHHHHHh
Q 043305 528 PCRPSVKDAIRLCRIAGV-KVRMVTGDNIQTARAIALECGILTS-------EA--DATEPNIIEGKSFRALSETQREEIA 597 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI-~v~mvTGDn~~TA~aIA~~~GI~~~-------~~--~~~~~~vi~G~~~~~l~~~e~~~i~ 597 (892)
|.-|+..++|+.+++.|- .+++||--|..--..+-+..||..- .. +..+.+.+.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~---------------- 147 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVR---------------- 147 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEee----------------
Confidence 678999999999999996 9999999998888888877776420 00 001111110
Q ss_pred cccccceEEEeccCHh-hHHHHHHHHHHc-------CCeEEEeCCCCCC-hHhhhcCCeeEeecCCCcHh
Q 043305 598 GEDFGMICVMGRSSPS-DKLLLVQALRKR-------GDVVAVTGDGTND-APALHEADIGLAMGIQGTEV 658 (892)
Q Consensus 598 ~~~~~~~~V~aR~sP~-dK~~lV~~Lq~~-------g~vVa~tGDG~ND-apALk~AdVGIAmgi~gt~v 658 (892)
+ ++.-.-+.||.|. =|..++..++.. -+.+-.+|||.|| +|.++...--+||-..|-+.
T Consensus 148 p--yH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 148 P--YHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred c--CCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 1 1111233444332 367776666543 2479999999999 46776666666776566554
No 164
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=80.08 E-value=6.2 Score=40.55 Aligned_cols=101 Identities=25% Similarity=0.246 Sum_probs=65.6
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccc-cceEEE
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDF-GMICVM 607 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~-~~~~V~ 607 (892)
+.+++.+++..++++|++++|+|- +-||.+ -..++..|..+.+--+..+..+.. -....+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~r--------gyf~~~~f~~~~~~m~~~l~~~gv~id~i~~ 92 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGR--------GYFTEADFDKLHNKMLKILASQGVKIDGILY 92 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCccc--------cCccHHHHHHHHHHHHHHHHHcCCccceEEE
Confidence 468999999999999999999994 445543 234455555544322222211110 012344
Q ss_pred eccCHhh--------HHHHHHHHHHcC---CeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSD--------KLLLVQALRKRG---DVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~d--------K~~lV~~Lq~~g---~vVa~tGDG~NDapALk~AdVG 648 (892)
|.-.|++ ...+.+.+++.+ ....|+||-..|..+=..|+++
T Consensus 93 Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 93 CPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 5545543 456667777765 7889999999999988888877
No 165
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=78.11 E-value=4.2 Score=41.24 Aligned_cols=97 Identities=11% Similarity=0.056 Sum_probs=60.7
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.+++.+.+++|+ .++.++|.-+...+..+.+..|+...-+ .++.+.+... -...
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd-----~i~~~~~~~~----------------~~~~ 139 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFD-----GIFCFDTANP----------------DYLL 139 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhC-----eEEEeecccC----------------ccCC
Confidence 46789999999998 4789999999999999999999853211 1221111100 0000
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCee
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVG 648 (892)
+.-.|+-=..+++.+....+.+.++||...|..+=++|++-
T Consensus 140 ~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 140 PKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 11122222233333333456788999999999988888764
No 166
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=77.76 E-value=9.9 Score=38.14 Aligned_cols=103 Identities=22% Similarity=0.245 Sum_probs=69.6
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHH---HHc-----CCCCCcCCCCCCceecchh-hhhcCHHHHHHH
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIA---LEC-----GILTSEADATEPNIIEGKS-FRALSETQREEI 596 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA---~~~-----GI~~~~~~~~~~~vi~G~~-~~~l~~~e~~~i 596 (892)
+|-.++++.+.++..++.|++++.+|+...--|...- .+. ++.. +.+...... +..+.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~------- 91 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALH------- 91 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhh-------
Confidence 3799999999999999999999999999876554332 221 2221 122222111 11111
Q ss_pred hcccccceEEEeccCHhhHHHHHHHHHHc-----CCeEEEeCCCCCChHhhhcCCee
Q 043305 597 AGEDFGMICVMGRSSPSDKLLLVQALRKR-----GDVVAVTGDGTNDAPALHEADIG 648 (892)
Q Consensus 597 ~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~-----g~vVa~tGDG~NDapALk~AdVG 648 (892)
-.|..|-.-+.|...++.++.. ...+|..|...+|+.|-++++|-
T Consensus 92 -------rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 -------REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred -------ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 1344555567899999998874 46788899999999999987664
No 167
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=76.90 E-value=9.6 Score=36.84 Aligned_cols=72 Identities=13% Similarity=0.129 Sum_probs=48.7
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHHHHH---------------HHHHHcCCCCCcC-----------CCCCCcee
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTAR---------------AIALECGILTSEA-----------DATEPNII 580 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~---------------aIA~~~GI~~~~~-----------~~~~~~vi 580 (892)
+++.+++.++++.+++.|+.++++||....... +.-.+-|+.-..- ..-....+
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~kp~~~~~~~~~dD~~i 102 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGKPWCGHDGFYVDDRAI 102 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCCCcCCCCCceecchhh
Confidence 679999999999999999999999999876533 2333345542110 00112344
Q ss_pred cchhhhhcCHHHHHHHhc
Q 043305 581 EGKSFRALSETQREEIAG 598 (892)
Q Consensus 581 ~G~~~~~l~~~e~~~i~~ 598 (892)
--.+|.+++.+|+.+++.
T Consensus 103 r~~~~~~~~~~~~~~~~~ 120 (126)
T TIGR01689 103 RPSEFSSLTYDEINTLTK 120 (126)
T ss_pred CHHHHHhcCHHHHHHHHh
Confidence 555677788888877765
No 168
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=75.34 E-value=1.9 Score=43.31 Aligned_cols=42 Identities=12% Similarity=-0.081 Sum_probs=37.9
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
.=..||++.+.++.|.+. ..+.+.|--....|..+...++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 335899999999999988 999999999999999999988864
No 169
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=75.09 E-value=33 Score=40.92 Aligned_cols=118 Identities=13% Similarity=0.036 Sum_probs=69.5
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH-cCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccce--E
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE-CGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI--C 605 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~-~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~--~ 605 (892)
+++++.+.+ +++|-+ +++|+-...-++.+|++ +|+..- + |.++..- .+. .. .
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~V---------I-gTeLev~---------~~G--~~TG~ 165 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADKV---------L-GTELEVS---------KSG--RATGF 165 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCEE---------E-ecccEEC---------cCC--EEeee
Confidence 566655544 556754 99999999999999988 798621 1 1111100 000 00 0
Q ss_pred EEe--ccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcH-hh--hhcccEEEcCCC
Q 043305 606 VMG--RSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTE-VA--KESSDIIILDDN 671 (892)
Q Consensus 606 V~a--R~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~-vA--keaaDiil~ddn 671 (892)
+-. .|.-++|..-++...........-||..||.|+|+.||-+.+++.+.-. .. +-...+|..|..
T Consensus 166 i~g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgr 236 (497)
T PLN02177 166 MKKPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGR 236 (497)
T ss_pred ecCCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCc
Confidence 111 1345678777764332112225679999999999999999999842211 11 123456666643
No 170
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=74.40 E-value=7 Score=43.10 Aligned_cols=41 Identities=10% Similarity=0.089 Sum_probs=38.6
Q ss_pred Cc-hhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC
Q 043305 529 CR-PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT 569 (892)
Q Consensus 529 lR-~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~ 569 (892)
+| |++.+++++|+++|+++.++|+-....+...-+++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 67 999999999999999999999999999999999999974
No 171
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=72.47 E-value=4.5 Score=43.17 Aligned_cols=90 Identities=21% Similarity=0.251 Sum_probs=56.5
Q ss_pred CCCchhHHHHHHHHHhCCCEEEEEecCCHH---HHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccc
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRMVTGDNIQ---TARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGM 603 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~mvTGDn~~---TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~ 603 (892)
+|.=|++.+.++.+++.|++|..|||.+.. ....=-++.|+... ..+++.+..-.. +
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-----~~l~lr~~~~~~---------------~ 173 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-----DHLILRPDKDPS---------------K 173 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-----SCGEEEEESSTS---------------S
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-----chhccccccccc---------------c
Confidence 466688999999999999999999998754 22222344564421 123333221100 0
Q ss_pred eEEEeccCHhhHHHHHHHHHHcC-CeEEEeCCCCCChHh
Q 043305 604 ICVMGRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDAPA 641 (892)
Q Consensus 604 ~~V~aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDapA 641 (892)
....+-|..--+.++++| ++++.+||-.+|...
T Consensus 174 -----~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 174 -----KSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -----------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred -----ccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 011344777888888885 688899999999865
No 172
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=72.46 E-value=34 Score=37.38 Aligned_cols=43 Identities=14% Similarity=0.145 Sum_probs=32.7
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHH---HHHHcCCC
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARA---IALECGIL 568 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~a---IA~~~GI~ 568 (892)
.+.+=|++.++++++++.|++++.+|+....+... --+++|+.
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45667889999999999999999999976443333 33557775
No 173
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=72.38 E-value=2.3 Score=39.21 Aligned_cols=46 Identities=20% Similarity=0.181 Sum_probs=34.0
Q ss_pred EecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHH---HHcCCCC
Q 043305 524 GIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIA---LECGILT 569 (892)
Q Consensus 524 gi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA---~~~GI~~ 569 (892)
-.-+.+=||+.++|+.++++|++++++|-....+...++ +.+||..
T Consensus 10 ~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 10 YNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp EETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred EeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 345677899999999999999999999988866655555 5577753
No 174
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=71.75 E-value=7.9 Score=39.13 Aligned_cols=93 Identities=14% Similarity=0.132 Sum_probs=59.3
Q ss_pred chhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEec
Q 043305 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGR 609 (892)
Q Consensus 530 R~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR 609 (892)
-|+ .+.++.+++. +++.++||.....+..+-+..|+...-. .++.+.+.. ..+
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd-----~i~~~~~~~--------------------~~K 142 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD-----AVVAADDVQ--------------------HHK 142 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce-----EEEehhhcc--------------------CCC
Confidence 344 5889998865 8999999999999999999999863211 222222111 011
Q ss_pred cCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 610 SSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 610 ~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
-.|+-=....+.+.-..+.+.++||..+|+.+=++|++-.
T Consensus 143 P~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred CChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 1222222233333323356888999999999999998753
No 175
>PLN02151 trehalose-phosphatase
Probab=69.18 E-value=33 Score=39.07 Aligned_cols=62 Identities=16% Similarity=0.183 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHc-C------CeEEEeCCCCCChHhhhcC-----CeeEeecCCCcHhhhhcccEEEcCCCchHHHHHH
Q 043305 613 SDKLLLVQALRKR-G------DVVAVTGDGTNDAPALHEA-----DIGLAMGIQGTEVAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 613 ~dK~~lV~~Lq~~-g------~vVa~tGDG~NDapALk~A-----dVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i 679 (892)
-+|...|+.|.+. + ..+.++||-..|-.|++.. ++||-+|. +. -.-.|++.|.+ -..+...+
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~-~~--k~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSK-YA--KETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEecc-CC--CCCcceEeCCC--HHHHHHHH
Confidence 3899999988764 1 2489999999999998853 67777762 21 12257888765 55555444
No 176
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=68.16 E-value=28 Score=38.15 Aligned_cols=87 Identities=22% Similarity=0.255 Sum_probs=53.6
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHH----HHHHHHHHcCCCCCcCCCCCCceecchh-hhhcCHHHHHHHhccc
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQ----TARAIALECGILTSEADATEPNIIEGKS-FRALSETQREEIAGED 600 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~----TA~aIA~~~GI~~~~~~~~~~~vi~G~~-~~~l~~~e~~~i~~~~ 600 (892)
+.|.=|++.+..+.+++.|++|+.+||.... |...+ ++.|+... ..+++.+.. -+.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~-----~~LiLR~~~D~~~------------- 203 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW-----EKLILKDPQDNSA------------- 203 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc-----ceeeecCCCCCcc-------------
Confidence 4577789999999999999999999999864 33333 23466421 112322110 000
Q ss_pred ccceEEEeccCHhhHHHHHHHHHHcC-CeEEEeCCCCCCh
Q 043305 601 FGMICVMGRSSPSDKLLLVQALRKRG-DVVAVTGDGTNDA 639 (892)
Q Consensus 601 ~~~~~V~aR~sP~dK~~lV~~Lq~~g-~vVa~tGDG~NDa 639 (892)
....+.|...-+.+.+.| .+++.+||-.+|.
T Consensus 204 --------~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 204 --------ENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred --------chhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 011133544445555555 5889999999987
No 177
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=65.65 E-value=13 Score=39.24 Aligned_cols=97 Identities=16% Similarity=0.241 Sum_probs=71.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.+.+++|++.|+.+...|+-....+..+.+..|+...-. .++++.+..+
T Consensus 86 ~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~-----~~v~~~dv~~-------------------- 140 (221)
T COG0637 86 KPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD-----VIVTADDVAR-------------------- 140 (221)
T ss_pred CCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc-----hhccHHHHhc--------------------
Confidence 789999999999999999999999999999999999999985322 2333332211
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeE
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGL 649 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGI 649 (892)
.+-.|+-=+.-.+.|.-..+.+.++.|..|.+.|-+.|+.-+
T Consensus 141 ~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 141 GKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 022354444444444434577899999999999999998654
No 178
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=65.23 E-value=11 Score=41.76 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=37.5
Q ss_pred Cc-hhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCC
Q 043305 529 CR-PSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILT 569 (892)
Q Consensus 529 lR-~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~ 569 (892)
+| |++.+++++|+++|+++.++|+-+...+..+.++.|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 56 999999999999999999999888888899999999964
No 179
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=63.51 E-value=39 Score=34.32 Aligned_cols=70 Identities=13% Similarity=0.153 Sum_probs=48.3
Q ss_pred ceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhh-hhcccEEEcCCCchHHHHHHHH
Q 043305 603 MICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVA-KESSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 603 ~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vA-keaaDiil~ddnf~sIv~~i~~ 681 (892)
++..+.=.+|++=...++.+++.| .-+++|++. ..+.| +..-..++...+..+|..++.+
T Consensus 102 ~i~~~~~~~~~e~~~~i~~~~~~G-~~viVGg~~------------------~~~~A~~~gl~~v~i~sg~esi~~Al~e 162 (176)
T PF06506_consen 102 DIKIYPYDSEEEIEAAIKQAKAEG-VDVIVGGGV------------------VCRLARKLGLPGVLIESGEESIRRALEE 162 (176)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTT---EEEESHH------------------HHHHHHHTTSEEEESS--HHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcC-CcEEECCHH------------------HHHHHHHcCCcEEEEEecHHHHHHHHHH
Confidence 556666678999999999999888 455556542 11222 2234567778889999999999
Q ss_pred HHHHHHHHHH
Q 043305 682 GRSVYANIQK 691 (892)
Q Consensus 682 GR~v~~nI~k 691 (892)
++.+++..++
T Consensus 163 A~~i~~~~~~ 172 (176)
T PF06506_consen 163 ALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 180
>PRK10444 UMP phosphatase; Provisional
Probab=63.40 E-value=7.2 Score=42.09 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=38.7
Q ss_pred EEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHc
Q 043305 521 AIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC 565 (892)
Q Consensus 521 Glvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~ 565 (892)
|.+--.+.+=|++.++++.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 344445677899999999999999999999999999988888875
No 181
>PTZ00445 p36-lilke protein; Provisional
Probab=62.94 E-value=15 Score=38.57 Aligned_cols=93 Identities=17% Similarity=0.283 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCC-CCcEEEEEEEecCCCchhHHHHHHHHHhCCCEEEE
Q 043305 471 LLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPE-DDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRM 549 (892)
Q Consensus 471 ~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e-~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~m 549 (892)
++.....++.+.+.|.|++++-+ +..-.... ...+..+. .+..++ -.++|+.+.-+++|+++||+|.+
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~---DnTlI~~H--sgG~~~~~~~~~~~~------~~~tpefk~~~~~l~~~~I~v~V 96 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDF---DLTMITKH--SGGYIDPDNDDIRVL------TSVTPDFKILGKRLKNSNIKISV 96 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecc---hhhhhhhh--cccccCCCcchhhhh------ccCCHHHHHHHHHHHHCCCeEEE
Confidence 34566677889999999998743 11000000 00011111 111111 23799999999999999999999
Q ss_pred EecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhh
Q 043305 550 VTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRA 587 (892)
Q Consensus 550 vTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~ 587 (892)
+|=-...+ |.. ......|.|.++-+
T Consensus 97 VTfSd~~~---------~~~----~~~~~~Isg~~li~ 121 (219)
T PTZ00445 97 VTFSDKEL---------IPS----ENRPRYISGDRMVE 121 (219)
T ss_pred EEccchhh---------ccc----cCCcceechHHHHH
Confidence 99654443 211 12356777776654
No 182
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=61.71 E-value=14 Score=39.86 Aligned_cols=43 Identities=9% Similarity=0.065 Sum_probs=36.0
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEec---CCHHHHHHHHHHcCCC
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTG---DNIQTARAIALECGIL 568 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTG---Dn~~TA~aIA~~~GI~ 568 (892)
.+.+=|++.++|+.|++.|++++++|| ..........++.|+.
T Consensus 15 ~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 15 GKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 344557899999999999999999996 6677777778888875
No 183
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=61.64 E-value=19 Score=36.59 Aligned_cols=86 Identities=20% Similarity=0.304 Sum_probs=58.1
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCH----HHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccce
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNI----QTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMI 604 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~----~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~ 604 (892)
+++=+++.|..-++.|=.+..+||... .+++.+|+...|.+.+ +
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~-----p--------------------------- 162 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN-----P--------------------------- 162 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc-----c---------------------------
Confidence 345567788888899999999999875 4677788887774321 1
Q ss_pred EEEeccCH-hhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCe
Q 043305 605 CVMGRSSP-SDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADI 647 (892)
Q Consensus 605 ~V~aR~sP-~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdV 647 (892)
.+|+-..| ..+..=...+|+++ +-..-||.-||..|-|+|++
T Consensus 163 v~f~Gdk~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 163 VIFAGDKPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred eeeccCCCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCc
Confidence 23333333 12223355666665 44456999999999999965
No 184
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=59.55 E-value=20 Score=38.14 Aligned_cols=91 Identities=16% Similarity=0.120 Sum_probs=54.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++-||+.++++.|++. +++.++|.-+.. .+..|+...-. .++...+.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd-----~i~~~~~~---------------------- 159 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE-----FVLRAGPH---------------------- 159 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc-----eeEecccC----------------------
Confidence 4668999999999875 899999986654 14556542110 11111110
Q ss_pred eccCHhhHHHHHHHHHH---cCCeEEEeCCC-CCChHhhhcCCeeEeec
Q 043305 608 GRSSPSDKLLLVQALRK---RGDVVAVTGDG-TNDAPALHEADIGLAMG 652 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~---~g~vVa~tGDG-~NDapALk~AdVGIAmg 652 (892)
.+..|. ...+.+.+++ ..+.+.|+||. ..|..+=+.|++-....
T Consensus 160 ~~~KP~-p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 160 GRSKPF-SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred CcCCCc-HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 111222 1122233333 34679999999 59999999998765443
No 185
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=58.88 E-value=24 Score=33.34 Aligned_cols=84 Identities=17% Similarity=0.178 Sum_probs=48.5
Q ss_pred HHHHHHHHhccCeEEEEEEeccccCC---CCchhhhhhccCCCCCcEEEEEEEecCCCchhHHHHHHHHHhCCCE-EEEE
Q 043305 475 KKAIEDMASSSLRCVAIAYRTYERER---IPDEEELSRWALPEDDLVLLAIVGIKDPCRPSVKDAIRLCRIAGVK-VRMV 550 (892)
Q Consensus 475 ~~~i~~~a~~glR~l~~Ayk~~~~~~---~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~~v~~aI~~l~~AGI~-v~mv 550 (892)
...++.+.+.|+++..+.-+.-+-.. ++.- .+ ....-|+..+. -+.+.+.+.+++|.+.|++ +|+.
T Consensus 17 ~~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl---~e-~p~~iDlavv~------~~~~~~~~~v~~~~~~g~~~v~~~ 86 (116)
T PF13380_consen 17 YRVLRNLKAAGYEVYPVNPKGGEILGIKCYPSL---AE-IPEPIDLAVVC------VPPDKVPEIVDEAAALGVKAVWLQ 86 (116)
T ss_dssp HHHHHHHHHTT-EEEEESTTCSEETTEE-BSSG---GG-CSST-SEEEE-------S-HHHHHHHHHHHHHHT-SEEEE-
T ss_pred HHHHHHHHhCCCEEEEECCCceEECcEEeeccc---cC-CCCCCCEEEEE------cCHHHHHHHHHHHHHcCCCEEEEE
Confidence 34556666699999988643311110 1110 00 01122433332 3567889999999999996 9999
Q ss_pred ecCCHHHHHHHHHHcCCC
Q 043305 551 TGDNIQTARAIALECGIL 568 (892)
Q Consensus 551 TGDn~~TA~aIA~~~GI~ 568 (892)
+|.....+...|++.||-
T Consensus 87 ~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 87 PGAESEELIEAAREAGIR 104 (116)
T ss_dssp TTS--HHHHHHHHHTT-E
T ss_pred cchHHHHHHHHHHHcCCE
Confidence 999999999999998874
No 186
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=58.06 E-value=54 Score=35.41 Aligned_cols=133 Identities=15% Similarity=0.237 Sum_probs=68.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC--------CCCCc--eecchhhhhcCHHHHHHHh
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD--------ATEPN--IIEGKSFRALSETQREEIA 597 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~--------~~~~~--vi~G~~~~~l~~~e~~~i~ 597 (892)
.+|+++.+.++.|++.+|.+.++|+-=-....++-++-|...++.. ..++. .+.|+-+..+...+ ..+
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~--~~l 167 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNE--SAL 167 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHH--HHH
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCc--ccc
Confidence 5799999999999999999999997777777777777777655431 00011 11122111111110 000
Q ss_pred cccccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcC---CeeEeecC-C-Cc----HhhhhcccEEEc
Q 043305 598 GEDFGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEA---DIGLAMGI-Q-GT----EVAKESSDIIIL 668 (892)
Q Consensus 598 ~~~~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~A---dVGIAmgi-~-gt----~vAkeaaDiil~ 668 (892)
+.+| .-+.++ ....|...||..-|+.|-.-. +.-+.+|- + .. +.-+++-||||.
T Consensus 168 -----------~~~~-----~~~~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv 230 (246)
T PF05822_consen 168 -----------EDSP-----YFKQLK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLV 230 (246)
T ss_dssp -----------TTHH-----HHHCTT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEE
T ss_pred -----------cCch-----HHHHhc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEE
Confidence 0011 111222 246788899999999997655 33333331 1 11 235678999999
Q ss_pred CCCchHHHHHH
Q 043305 669 DDNFASVVKVV 679 (892)
Q Consensus 669 ddnf~sIv~~i 679 (892)
+|.=-.++..|
T Consensus 231 ~D~tm~v~~~i 241 (246)
T PF05822_consen 231 DDQTMDVPNAI 241 (246)
T ss_dssp T--B-HHHHHH
T ss_pred CCCCchHHHHH
Confidence 98755555444
No 187
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=52.97 E-value=42 Score=40.38 Aligned_cols=40 Identities=18% Similarity=0.283 Sum_probs=31.2
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCH------------HHHHHHHHHcCCC
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNI------------QTARAIALECGIL 568 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~------------~TA~aIA~~~GI~ 568 (892)
+-|+++++++.|+++|+++.++|.-.. ..+.++.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997433 3455666666653
No 188
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=51.02 E-value=30 Score=36.27 Aligned_cols=52 Identities=25% Similarity=0.312 Sum_probs=44.4
Q ss_pred EEEEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHH---cCCCC
Q 043305 518 VLLAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALE---CGILT 569 (892)
Q Consensus 518 ~~lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~---~GI~~ 569 (892)
.+-|.+-++|-.=|++.||++.|+.++.+|+.+|--..+.-+.+.++ ||+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 46789999999999999999999999999999998888777777665 56653
No 189
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=49.21 E-value=1.4e+02 Score=30.94 Aligned_cols=121 Identities=20% Similarity=0.238 Sum_probs=70.1
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++-+++.++++.+++. .++.++|--....+....+++||...-+ .+++.+. .
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd----~v~~s~~-----------------------~ 150 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFD----AVFISED-----------------------V 150 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhh----eEEEecc-----------------------c
Confidence 5678899999999988 9999999878888888999999653211 1111111 1
Q ss_pred eccCHhhHHHHHHHHHHc---CCeEEEeCCC-CCChHhhhcCCe-eEeecCCCcH--hhhhcccEEEcCCCchHHHHHH
Q 043305 608 GRSSPSDKLLLVQALRKR---GDVVAVTGDG-TNDAPALHEADI-GLAMGIQGTE--VAKESSDIIILDDNFASVVKVV 679 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~---g~vVa~tGDG-~NDapALk~AdV-GIAmgi~gt~--vAkeaaDiil~ddnf~sIv~~i 679 (892)
....| ++...-..+++. .+.+.++||. .||...-++++. ++-+...+.. .+.+..|..+.+ +..+..++
T Consensus 151 g~~KP-~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~--l~~l~~~~ 226 (229)
T COG1011 151 GVAKP-DPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISS--LAELLDLL 226 (229)
T ss_pred ccCCC-CcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcC--HHHHHHHH
Confidence 12233 223333344443 4679999996 678444444443 3333322211 111456666654 55555544
No 190
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=48.53 E-value=1.3e+02 Score=33.68 Aligned_cols=63 Identities=19% Similarity=0.263 Sum_probs=38.0
Q ss_pred EeccCHhhHHHHHHHHHH--cCCeEEEeCCC-CCChH---hhhcCCeeEeecCCCc---HhhhhcccEEEcC
Q 043305 607 MGRSSPSDKLLLVQALRK--RGDVVAVTGDG-TNDAP---ALHEADIGLAMGIQGT---EVAKESSDIIILD 669 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~--~g~vVa~tGDG-~NDap---ALk~AdVGIAmgi~gt---~vAkeaaDiil~d 669 (892)
|.=|||.-=.++++...- .|..|+++|-| +-=.| .|.+++.-+.+=-+.| ..+...||+++.-
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 556777666666655532 38999999997 54444 4555555554431222 2234568999874
No 191
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=45.56 E-value=43 Score=38.05 Aligned_cols=114 Identities=19% Similarity=0.121 Sum_probs=66.8
Q ss_pred chhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHc-C-------CCCCcC----CCC-CCceecchhhhhcCHHHHHHH
Q 043305 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC-G-------ILTSEA----DAT-EPNIIEGKSFRALSETQREEI 596 (892)
Q Consensus 530 R~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~-G-------I~~~~~----~~~-~~~vi~G~~~~~l~~~e~~~i 596 (892)
-|++++.++.|+++|+++.++|+-....+..+.+.+ | +...-+ ... ....-++..|+.++.+.-...
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 579999999999999999999999999999999995 6 322110 000 001113444554433211111
Q ss_pred hccc--ccceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCC-CChHhhh-cCC
Q 043305 597 AGED--FGMICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGT-NDAPALH-EAD 646 (892)
Q Consensus 597 ~~~~--~~~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~-NDapALk-~Ad 646 (892)
+... +.+-.|++.=+-. .+-+.+...++.|+++||-. .|.-.-+ .++
T Consensus 266 ~~~~~~l~~g~vY~gGn~~---~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~G 316 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSLK---QFHELLKWRGKEVLYFGDHIYGDLLRSKKKRG 316 (343)
T ss_pred CCccccccCCCeEeCCCHH---HHHHHHCCCCCcEEEECCcchHHHHhhHHhcC
Confidence 1100 1122355444332 34455556789999999974 4776555 443
No 192
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=43.88 E-value=25 Score=34.99 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=52.2
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEE
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVM 607 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~ 607 (892)
++.||+.++++ ++.++|.-+......+.+..|+...-. .++.+.+.. .
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd-----~v~~~~~~~--------------------~ 137 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFD-----RAFSVDTVR--------------------A 137 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHh-----hhccHhhcC--------------------C
Confidence 57889999998 367889888888888888888753211 122221110 0
Q ss_pred eccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcC
Q 043305 608 GRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEA 645 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~A 645 (892)
..-.|+-=..+.+.+.-..+.+.|+||...|..+=+++
T Consensus 138 ~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 138 YKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 11223222333444433456799999999998776543
No 193
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=43.07 E-value=1.2e+02 Score=33.21 Aligned_cols=127 Identities=15% Similarity=0.149 Sum_probs=78.6
Q ss_pred EecCCCchhHHHHHHHHHhC-CCEEEEEecCCHHHHHHHHHHcCC--CCCcCCCCCCceecchhhhhc------------
Q 043305 524 GIKDPCRPSVKDAIRLCRIA-GVKVRMVTGDNIQTARAIALECGI--LTSEADATEPNIIEGKSFRAL------------ 588 (892)
Q Consensus 524 gi~DplR~~v~~aI~~l~~A-GI~v~mvTGDn~~TA~aIA~~~GI--~~~~~~~~~~~vi~G~~~~~l------------ 588 (892)
-...++-++..+.++.|... ...|+++||....-......--|| ...+.. +...+.|...+..
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa--~~r~~~g~~~~~~~~~~~~~~~~~v 113 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGA--EVRDPNGKWWINLAEEADLRWLKEV 113 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecce--EEecCCCCeeEecCHHHHhhHHHHH
Confidence 34567888999999999877 567999999999988887764333 211110 0001122211111
Q ss_pred ------------------------------CHHHHHH--------H-----hcccccceEEEeccCHhhHHHHHHHHHHc
Q 043305 589 ------------------------------SETQREE--------I-----AGEDFGMICVMGRSSPSDKLLLVQALRKR 625 (892)
Q Consensus 589 ------------------------------~~~e~~~--------i-----~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~ 625 (892)
.+++... . +.-..++..|-.|.+-..|...++...+.
T Consensus 114 ~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~ 193 (266)
T COG1877 114 AAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDE 193 (266)
T ss_pred HHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhc
Confidence 1111000 0 00011344577787777899999966654
Q ss_pred ----CCeEEEeCCCCCChHhhhcCC----eeEeec
Q 043305 626 ----GDVVAVTGDGTNDAPALHEAD----IGLAMG 652 (892)
Q Consensus 626 ----g~vVa~tGDG~NDapALk~Ad----VGIAmg 652 (892)
|..+.+.||-..|-.|++..+ ++|-+|
T Consensus 194 ~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 194 LPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred CCCCCCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 446889999999999999887 555566
No 194
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=36.60 E-value=3.4e+02 Score=28.29 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=14.2
Q ss_pred ccccccCCCCCCCCCccHHHHHHHHHHHHH
Q 043305 746 DHLMQRSPVGRREPLITNIMWRNLLIQASY 775 (892)
Q Consensus 746 ~~lm~r~P~~r~~~li~~~m~~~i~~~ai~ 775 (892)
+++.+.+|..+..+. +...|..++-.++.
T Consensus 60 ~eli~~~~k~~~~~~-~~~~~~~~ld~~L~ 88 (206)
T PF06570_consen 60 DELIKPLPKPKKKNK-NSNPWLMALDNSLL 88 (206)
T ss_pred HHHhccccCCccccc-ccchHHHHHHHHHH
Confidence 355566665544444 33445555544443
No 195
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=34.50 E-value=18 Score=36.39 Aligned_cols=13 Identities=38% Similarity=0.360 Sum_probs=12.1
Q ss_pred EEeCCCCCcccCc
Q 043305 320 ICSDKTGTLTLNQ 332 (892)
Q Consensus 320 IcsDKTGTLT~n~ 332 (892)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999987
No 196
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=33.90 E-value=48 Score=36.30 Aligned_cols=46 Identities=15% Similarity=0.239 Sum_probs=39.0
Q ss_pred EEEEEecCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHc
Q 043305 520 LAIVGIKDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALEC 565 (892)
Q Consensus 520 lGlvgi~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~ 565 (892)
=|++.--..+=||+.++|+.++++|++++.+|--...+...++.++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 3666677888899999999999999999999998888888665553
No 197
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=33.57 E-value=6.5e+02 Score=27.27 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=29.9
Q ss_pred ecCCCchhHHHHHHHHHhCCCE-EEEEecCC-HHHHHHHHHHcC
Q 043305 525 IKDPCRPSVKDAIRLCRIAGVK-VRMVTGDN-IQTARAIALECG 566 (892)
Q Consensus 525 i~DplR~~v~~aI~~l~~AGI~-v~mvTGDn-~~TA~aIA~~~G 566 (892)
+-|-+-++..+.++.|++.|+. +.+++-.. .+..+.+++.+.
T Consensus 121 ipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~ 164 (256)
T TIGR00262 121 VADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQ 164 (256)
T ss_pred ECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCC
Confidence 3455557888999999999998 44666655 456677777653
No 198
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.55 E-value=3e+02 Score=30.50 Aligned_cols=43 Identities=12% Similarity=0.172 Sum_probs=28.1
Q ss_pred CCCchhHHHHHHHHHhCCCE---EEEEecCCHHHH------HHHHHHcCCCC
Q 043305 527 DPCRPSVKDAIRLCRIAGVK---VRMVTGDNIQTA------RAIALECGILT 569 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~---v~mvTGDn~~TA------~aIA~~~GI~~ 569 (892)
..+++++++.++.+++.|++ +.+.-||++... ..-|+++||..
T Consensus 11 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 11 KKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 45677777888888776765 355667776544 33566777754
No 199
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=33.47 E-value=2e+02 Score=32.77 Aligned_cols=104 Identities=21% Similarity=0.146 Sum_probs=62.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCC---CCCCceecch---hhhhcCHHHHHHHhcccc
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEAD---ATEPNIIEGK---SFRALSETQREEIAGEDF 601 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~---~~~~~vi~G~---~~~~l~~~e~~~i~~~~~ 601 (892)
+|=.|.+.||+..++.|+.|.++-=|=..|-+..=.++++...-.- --.++...|. +..++++++..+.+.
T Consensus 96 ~PGsEmk~AIe~A~e~ga~V~lIDRdI~vTl~R~~~~~~~~EKlK~~~~L~~~~~~~g~~e~ei~~l~~~D~~~al~--- 172 (388)
T COG1916 96 KPGSEMKAAIEAARELGAPVALIDRDIGVTLRRAWAKMPFWEKLKLISSLISGLLFPGQSEIEIDELKQEDVLSALM--- 172 (388)
T ss_pred CChHHHHHHHHHHHHcCCCEEEecccHHHHHHHHHHhCCHHHHHHHHHHHHHhcccCCCchHHHHHHhhhhHHHHHH---
Confidence 4567889999999999999999999988888777666654321000 0001233442 334444433332111
Q ss_pred cceEEEeccCHhhHHHHHHHH------------HHcCCeEEEeCCCCC
Q 043305 602 GMICVMGRSSPSDKLLLVQAL------------RKRGDVVAVTGDGTN 637 (892)
Q Consensus 602 ~~~~V~aR~sP~dK~~lV~~L------------q~~g~vVa~tGDG~N 637 (892)
.=|.|-+|.-+.-+|..= ....++||++|-|.-
T Consensus 173 ---~efr~~~P~~~~vLIDERd~ymA~nll~~~~~~~~vvAVVGAGH~ 217 (388)
T COG1916 173 ---QEFRRFSPTVYKVLIDERDRYMARNLLEIVSILNDVVAVVGAGHV 217 (388)
T ss_pred ---HHHHHhChhHHHHHHHHHHHHHHHHHHHHHcccCcEEEEEccccH
Confidence 124577888777666421 222469999998753
No 200
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=33.38 E-value=6.7e+02 Score=27.37 Aligned_cols=42 Identities=14% Similarity=0.214 Sum_probs=26.2
Q ss_pred ecCCCchhHHHHHHHHHhCCCE-EEEEecCC-HHHHHHHHHHcC
Q 043305 525 IKDPCRPSVKDAIRLCRIAGVK-VRMVTGDN-IQTARAIALECG 566 (892)
Q Consensus 525 i~DplR~~v~~aI~~l~~AGI~-v~mvTGDn-~~TA~aIA~~~G 566 (892)
+-|-+=++..+.++.|++.|+. +.++|=.. .+..+.|++.+.
T Consensus 125 ipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~ 168 (263)
T CHL00200 125 IPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAP 168 (263)
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCC
Confidence 3444446677777777777775 55565554 456666666654
No 201
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.31 E-value=5.1e+02 Score=28.70 Aligned_cols=174 Identities=11% Similarity=0.118 Sum_probs=81.9
Q ss_pred ccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCC--chhHHHHHHHHHh
Q 043305 465 QMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPC--RPSVKDAIRLCRI 542 (892)
Q Consensus 465 ~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~Dpl--R~~v~~aI~~l~~ 542 (892)
++.++.++++++.++.+..+|.+. .+|-=... |.+ .-=++.-++.|++
T Consensus 10 ~va~~i~~~lk~~i~~l~~~g~~p-~Laii~vg-----------------------------~d~as~~Yv~~k~k~~~~ 59 (285)
T PRK14189 10 ALSKQLRAEAAQRAAALTARGHQP-GLAVILVG-----------------------------DNPASQVYVRNKVKACED 59 (285)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-eEEEEEeC-----------------------------CCchHHHHHHHHHHHHHH
Confidence 456677888888888888777554 33322221 111 1124567888999
Q ss_pred CCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhc-cc----cc---------ceEEEe
Q 043305 543 AGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAG-ED----FG---------MICVMG 608 (892)
Q Consensus 543 AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~-~~----~~---------~~~V~a 608 (892)
.||.+..+-=+...|-..+.+.+.-++.+.. -+++.+.-+-...++++++.+.+. ++ ++ .-.-|.
T Consensus 60 ~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~-V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~ 138 (285)
T PRK14189 60 NGFHSLKDRYPADLSEAELLARIDELNRDPK-IHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFR 138 (285)
T ss_pred cCCEEEEEECCCCCCHHHHHHHHHHHcCCCC-CCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCc
Confidence 9998877654432222222222222222211 123333333222333332222111 00 00 112245
Q ss_pred ccCHhhHHHHHHHHHH--cCCeEEEeCCCCC-C---hHhhhcCCeeEeecCCCcH---hhhhcccEEEcC
Q 043305 609 RSSPSDKLLLVQALRK--RGDVVAVTGDGTN-D---APALHEADIGLAMGIQGTE---VAKESSDIIILD 669 (892)
Q Consensus 609 R~sP~dK~~lV~~Lq~--~g~vVa~tGDG~N-D---apALk~AdVGIAmgi~gt~---vAkeaaDiil~d 669 (892)
=|||.-=.++++..+- .|..|.++|-|.. = +.+|...+.-+.+--+.|. ..-..|||++.-
T Consensus 139 PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 139 PCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred CCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 5666555444444331 3778888887755 2 2244443333322222222 133567777753
No 202
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=32.29 E-value=27 Score=45.01 Aligned_cols=27 Identities=33% Similarity=0.485 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccc
Q 043305 199 LWEAWQDLTLIILMIAAAASLALGIKT 225 (892)
Q Consensus 199 ~~~a~~D~~liIL~vaAvvSl~lg~~~ 225 (892)
++++|+|+++++|++||++|+++|.+.
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~ 27 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFE 27 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhccc
Confidence 478999999999999999999998654
No 203
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.12 E-value=6.7e+02 Score=27.81 Aligned_cols=174 Identities=11% Similarity=0.135 Sum_probs=83.4
Q ss_pred ccCHHHHHHHHHHHHHHHhc-cCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEEecCCCch--hHHHHHHHHH
Q 043305 465 QMDEDKLLTFKKAIEDMASS-SLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVGIKDPCRP--SVKDAIRLCR 541 (892)
Q Consensus 465 ~l~~~~~~~~~~~i~~~a~~-glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvgi~DplR~--~v~~aI~~l~ 541 (892)
++.++.++++++.++.+..+ |.+. .+| ++-.-|.+-. =++..++.|+
T Consensus 9 ~ia~~i~~~lk~~v~~l~~~~g~~P-~La-----------------------------ii~vg~d~as~~Yv~~k~k~~~ 58 (284)
T PRK14179 9 ALAQKMQAELAEKVAKLKEEKGIVP-GLV-----------------------------VILVGDNPASQVYVRNKERSAL 58 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCc-eEE-----------------------------EEEeCCChhHHHHHHHHHHHHH
Confidence 45567778888888888766 5433 232 2222222221 2355678899
Q ss_pred hCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhc-cc----cc---------ceEEE
Q 043305 542 IAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAG-ED----FG---------MICVM 607 (892)
Q Consensus 542 ~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~-~~----~~---------~~~V~ 607 (892)
+.||++..+.=+.-.|-..+-+.+.=++.+. .-+++.+.-+-...++++.+.+.+. ++ ++ .-.-|
T Consensus 59 ~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~-~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~ 137 (284)
T PRK14179 59 AAGFKSEVVRLPETISQEELLDLIERYNQDP-TWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVM 137 (284)
T ss_pred HcCCEEEEEECCCCCCHHHHHHHHHHHhCCC-CCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCC
Confidence 9999877665443222222222222222221 1123333333222333322222111 00 00 11225
Q ss_pred eccCHhhHHHHHHHHHH--cCCeEEEeCC-CCCChH---hhhcCCeeEeecCCCcH---hhhhcccEEEcC
Q 043305 608 GRSSPSDKLLLVQALRK--RGDVVAVTGD-GTNDAP---ALHEADIGLAMGIQGTE---VAKESSDIIILD 669 (892)
Q Consensus 608 aR~sP~dK~~lV~~Lq~--~g~vVa~tGD-G~NDap---ALk~AdVGIAmgi~gt~---vAkeaaDiil~d 669 (892)
.=|||.-=.++++...- .|..|+++|- |+-=.| +|.+++.-+.+--+-|+ ..-..||+++.-
T Consensus 138 ~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 138 IPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred cCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 66777765555554432 3889999998 665555 44444443333212222 234568888763
No 204
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=30.71 E-value=35 Score=29.30 Aligned_cols=26 Identities=15% Similarity=0.388 Sum_probs=20.5
Q ss_pred CCcccCHHHHHhhhccCChhHHHHhC
Q 043305 113 GDFAIGQEQLSIMTRDHNNNALQQFG 138 (892)
Q Consensus 113 ~~~~~~~~~l~~~~~~~~~~~~~~~g 138 (892)
+++.++++|+..+++..+.+.++..+
T Consensus 26 ~~~~vs~~el~a~lrke~~~~y~~c~ 51 (68)
T PF07308_consen 26 AGFEVSKAELSAWLRKEDEKGYKECS 51 (68)
T ss_pred cCCccCHHHHHHHHCCCCCccccccC
Confidence 46899999999999988777655544
No 205
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=30.66 E-value=7.3e+02 Score=26.98 Aligned_cols=39 Identities=13% Similarity=0.120 Sum_probs=22.4
Q ss_pred CCCchhHHHHHHHHHhCCCEEEE-EecCC-HHHHHHHHHHc
Q 043305 527 DPCRPSVKDAIRLCRIAGVKVRM-VTGDN-IQTARAIALEC 565 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~v~m-vTGDn-~~TA~aIA~~~ 565 (892)
|=+-++..+.++.|++.|+..+. +|-.. .+..+.+++..
T Consensus 125 DLp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s 165 (258)
T PRK13111 125 DLPPEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHA 165 (258)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhC
Confidence 43445666777777777765333 55555 34556565553
No 206
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=30.66 E-value=94 Score=29.17 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=30.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCC
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGI 567 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI 567 (892)
+.---+++.++++.+++.|++++-+|++.. -...|.+-|+
T Consensus 52 ~SG~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 52 YSGNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 344567899999999999999999999874 2334554454
No 207
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.13 E-value=3e+02 Score=30.43 Aligned_cols=43 Identities=26% Similarity=0.333 Sum_probs=26.5
Q ss_pred CCCchhHHHHHHHHHhCCCE---EEEEecCCHHHH------HHHHHHcCCCC
Q 043305 527 DPCRPSVKDAIRLCRIAGVK---VRMVTGDNIQTA------RAIALECGILT 569 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~---v~mvTGDn~~TA------~aIA~~~GI~~ 569 (892)
+.++++.++.|+.+++.|++ ..+.-||++... ..-|+++||..
T Consensus 11 ~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14182 11 AKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITS 62 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 34567777777777766665 445567776543 33456667654
No 208
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.74 E-value=3.5e+02 Score=30.17 Aligned_cols=62 Identities=16% Similarity=0.251 Sum_probs=37.4
Q ss_pred EeccCHhhHHHHHHHHHH--cCCeEEEeCCCCC-ChH---hhh------cCCeeEeecCCCc--HhhhhcccEEEcC
Q 043305 607 MGRSSPSDKLLLVQALRK--RGDVVAVTGDGTN-DAP---ALH------EADIGLAMGIQGT--EVAKESSDIIILD 669 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~--~g~vVa~tGDG~N-Dap---ALk------~AdVGIAmgi~gt--~vAkeaaDiil~d 669 (892)
|.=|||.-=.++++...- .|..|+++|-+.. =-| +|. .|.|-++-. ... +..-..||+++.-
T Consensus 138 ~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 138 FVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAA 213 (295)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 455788766555555432 3899999999855 122 332 356666553 222 2245679999864
No 209
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=29.00 E-value=82 Score=31.48 Aligned_cols=40 Identities=18% Similarity=0.069 Sum_probs=36.6
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGIL 568 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~ 568 (892)
.+||++.+.++.|++. +++.++|.-....|..+.+.++..
T Consensus 58 ~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 58 KLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 5799999999999955 999999999999999999998765
No 210
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.23 E-value=3.4e+02 Score=29.93 Aligned_cols=63 Identities=19% Similarity=0.305 Sum_probs=32.1
Q ss_pred EeccCHhhHHHHHHHHHH--cCCeEEEeCCCCC----ChHhhhcCCeeEeecCCCcH-h--hhhcccEEEcC
Q 043305 607 MGRSSPSDKLLLVQALRK--RGDVVAVTGDGTN----DAPALHEADIGLAMGIQGTE-V--AKESSDIIILD 669 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~--~g~vVa~tGDG~N----DapALk~AdVGIAmgi~gt~-v--AkeaaDiil~d 669 (892)
|.=|||.-=.++++.+.- .|..|+++|-+.. =+-+|.+.+--+.+--+-|. . .-..|||++.-
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 455677666566555432 3778888887654 12244443333333222222 1 22457777653
No 211
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=28.00 E-value=99 Score=31.47 Aligned_cols=41 Identities=22% Similarity=0.227 Sum_probs=32.0
Q ss_pred CCchhHHHHHHHHHhCCCEEEEEe-cCCHHHHHHHHHHcCCC
Q 043305 528 PCRPSVKDAIRLCRIAGVKVRMVT-GDNIQTARAIALECGIL 568 (892)
Q Consensus 528 plR~~v~~aI~~l~~AGI~v~mvT-GDn~~TA~aIA~~~GI~ 568 (892)
.+-|+|+++++.|++.|+++.+.| -|.+..|+.+-+.++|.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 467999999999999999999999 68899999999999998
No 212
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=27.83 E-value=7.7e+02 Score=26.33 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHhCCCEEEE-EecCC-HHHHHHHHH-HcCC
Q 043305 531 PSVKDAIRLCRIAGVKVRM-VTGDN-IQTARAIAL-ECGI 567 (892)
Q Consensus 531 ~~v~~aI~~l~~AGI~v~m-vTGDn-~~TA~aIA~-~~GI 567 (892)
++..+.++.|+++|++..+ ++-.. .+..+.+++ ..|.
T Consensus 116 ee~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~~~~ 155 (242)
T cd04724 116 EEAEEFREAAKEYGLDLIFLVAPTTPDERIKKIAELASGF 155 (242)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCCC
Confidence 5677777788888876554 43332 344555555 4444
No 213
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=27.65 E-value=1.5e+02 Score=25.71 Aligned_cols=47 Identities=15% Similarity=0.172 Sum_probs=38.2
Q ss_pred EEEecCCCchhHHHHHHHHHhCCCEEEE-EecCCHHHHHHHHHHcCCC
Q 043305 522 IVGIKDPCRPSVKDAIRLCRIAGVKVRM-VTGDNIQTARAIALECGIL 568 (892)
Q Consensus 522 lvgi~DplR~~v~~aI~~l~~AGI~v~m-vTGDn~~TA~aIA~~~GI~ 568 (892)
++.+.+..++.+.+..+.++++|++|.+ ..+.+..-...-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 4455667888899999999999999988 5677777777888888875
No 214
>PRK04302 triosephosphate isomerase; Provisional
Probab=26.43 E-value=6.5e+02 Score=26.44 Aligned_cols=99 Identities=16% Similarity=0.185 Sum_probs=53.4
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEe
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMG 608 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~a 608 (892)
+-+++.+-++.+++.|+.+++++|+ .+.++.++ +.|-. .+.++...... .-....
T Consensus 99 ~~~e~~~~v~~a~~~Gl~~I~~v~~-~~~~~~~~-~~~~~--------~I~~~p~~~ig---------------t~~~~~ 153 (223)
T PRK04302 99 TLADIEAVVERAKKLGLESVVCVNN-PETSAAAA-ALGPD--------YVAVEPPELIG---------------TGIPVS 153 (223)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEcCC-HHHHHHHh-cCCCC--------EEEEeCccccc---------------cCCCCC
Confidence 3456788999999999999999998 33444332 22210 11111110000 000001
Q ss_pred ccCHhhHHHHHHHHHHc-CCeEEEeCCCCCChHhhh---cCC-eeEeec
Q 043305 609 RSSPSDKLLLVQALRKR-GDVVAVTGDGTNDAPALH---EAD-IGLAMG 652 (892)
Q Consensus 609 R~sP~dK~~lV~~Lq~~-g~vVa~tGDG~NDapALk---~Ad-VGIAmg 652 (892)
..+|++-.++++.+++. .++-.+.|=|+++....+ +++ =|+.+|
T Consensus 154 ~~~~~~i~~~~~~ir~~~~~~pvi~GggI~~~e~~~~~~~~gadGvlVG 202 (223)
T PRK04302 154 KAKPEVVEDAVEAVKKVNPDVKVLCGAGISTGEDVKAALELGADGVLLA 202 (223)
T ss_pred cCCHHHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHcCCCCEEEEe
Confidence 24577777777777763 345556688887655443 333 345555
No 215
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.33 E-value=4e+02 Score=29.52 Aligned_cols=62 Identities=15% Similarity=0.225 Sum_probs=35.5
Q ss_pred EeccCHhhHHHHHHHHHH--cCCeEEEeCCCCC----ChHhhhc------CCeeEeecCCCcH--hhhhcccEEEcC
Q 043305 607 MGRSSPSDKLLLVQALRK--RGDVVAVTGDGTN----DAPALHE------ADIGLAMGIQGTE--VAKESSDIIILD 669 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~--~g~vVa~tGDG~N----DapALk~------AdVGIAmgi~gt~--vAkeaaDiil~d 669 (892)
|.-|||.-=.++++...- .|..|.++|-+.. =+-+|.+ |.|-++-. ...+ ..-..||+++.-
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFVA 211 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 556777765555555432 3889999998754 1224433 55555543 2222 244678888753
No 216
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=26.25 E-value=4.3e+02 Score=29.65 Aligned_cols=140 Identities=21% Similarity=0.241 Sum_probs=75.6
Q ss_pred ccCHHHHHHHHHHHHHHHhccCeEEEEEEeccccCCCCchhhhhhccCCCCCcEEEEEEE--ecCCCchhHHHHHH-HHH
Q 043305 465 QMDEDKLLTFKKAIEDMASSSLRCVAIAYRTYERERIPDEEELSRWALPEDDLVLLAIVG--IKDPCRPSVKDAIR-LCR 541 (892)
Q Consensus 465 ~l~~~~~~~~~~~i~~~a~~glR~l~~Ayk~~~~~~~~~~~~~~~~~~~e~~l~~lGlvg--i~DplR~~v~~aI~-~l~ 541 (892)
..+++.|+++.+.++++ ||+.=..| | ....+.-..+|++. +.+|--.+....|+ .|+
T Consensus 26 ~Vs~eTr~kV~~a~~el---gY~pN~~A-r----------------~L~~~~s~~Ig~i~p~~~~~~~~~i~~gi~~~~~ 85 (333)
T COG1609 26 YVSEETREKVLAAIKEL---GYRPNAVA-R----------------SLRTGRTKTIGLVVPDITNPFFAEILKGIEEAAR 85 (333)
T ss_pred CCCHHHHHHHHHHHHHH---CCCCCHHH-H----------------HHHhCCCCEEEEEeCCCCCchHHHHHHHHHHHHH
Confidence 46788888888887775 33321111 0 00011223455553 44566666666655 478
Q ss_pred hCCCEEEEEecCC-HHH---HHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEeccCHh----
Q 043305 542 IAGVKVRMVTGDN-IQT---ARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGRSSPS---- 613 (892)
Q Consensus 542 ~AGI~v~mvTGDn-~~T---A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR~sP~---- 613 (892)
+.|+.+.+...++ ++. +...-.+-+. .++++.|.... +...+.+.+....+.++.|..|.
T Consensus 86 ~~gy~~~l~~~~~~~~~e~~~~~~l~~~~v--------dGiIi~~~~~~----~~~~~~l~~~~~P~V~i~~~~~~~~~~ 153 (333)
T COG1609 86 EAGYSLLLANTDDDPEKEREYLETLLQKRV--------DGLILLGERPN----DSLLELLAAAGIPVVVIDRSPPGLGVP 153 (333)
T ss_pred HcCCEEEEECCCCCHHHHHHHHHHHHHcCC--------CEEEEecCCCC----HHHHHHHHhcCCCEEEEeCCCccCCCC
Confidence 8999988888887 222 2222333222 24666662211 12222222112245666665552
Q ss_pred --------hHHHHHHHHHHcCC-eEEEeCCCC
Q 043305 614 --------DKLLLVQALRKRGD-VVAVTGDGT 636 (892)
Q Consensus 614 --------dK~~lV~~Lq~~g~-vVa~tGDG~ 636 (892)
.-..+++.|.++|+ .++++|.+.
T Consensus 154 ~V~~Dn~~~~~~a~~~L~~~G~~~i~~i~~~~ 185 (333)
T COG1609 154 SVGIDNFAGAYLATEHLIELGHRRIAFIGGPL 185 (333)
T ss_pred EEEEChHHHHHHHHHHHHHCCCceEEEEeCCC
Confidence 23578899999875 488887764
No 217
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=25.86 E-value=75 Score=33.82 Aligned_cols=95 Identities=11% Similarity=0.109 Sum_probs=51.3
Q ss_pred chhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCCcCCCCCCceecchhhhhcCHHHHHHHhcccccceEEEec
Q 043305 530 RPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTSEADATEPNIIEGKSFRALSETQREEIAGEDFGMICVMGR 609 (892)
Q Consensus 530 R~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~l~~~e~~~i~~~~~~~~~V~aR 609 (892)
-+++.++++.+++.|++. ++|......+.......|. |.-+..+ .. .- .+...+..
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~--------------g~~~~~i-----~~-~g---~~~~~~gK 195 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGA--------------GYYAELI-----KQ-LG---GKVIYSGK 195 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecc--------------cHHHHHH-----HH-hC---CcEecCCC
Confidence 479999999999999997 7787655444322211111 1101100 00 00 01122333
Q ss_pred cCHhhHHHHHHHHHHc-CCeEEEeCCC-CCChHhhhcCCee
Q 043305 610 SSPSDKLLLVQALRKR-GDVVAVTGDG-TNDAPALHEADIG 648 (892)
Q Consensus 610 ~sP~dK~~lV~~Lq~~-g~vVa~tGDG-~NDapALk~AdVG 648 (892)
-+|+-=..+.+.+... .+.+.|+||. .+|..+=+.|++-
T Consensus 196 P~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 196 PYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred CCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 3343223333333222 3479999999 5999988888764
No 218
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.64 E-value=4e+02 Score=29.55 Aligned_cols=43 Identities=19% Similarity=0.333 Sum_probs=26.1
Q ss_pred CCCchhHHHHHHHHHhCCCE---EEEEecCCHHHH------HHHHHHcCCCC
Q 043305 527 DPCRPSVKDAIRLCRIAGVK---VRMVTGDNIQTA------RAIALECGILT 569 (892)
Q Consensus 527 DplR~~v~~aI~~l~~AGI~---v~mvTGDn~~TA------~aIA~~~GI~~ 569 (892)
+.+|+++++-++.+++.|++ ..+.-||++... ..-|+++||..
T Consensus 13 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14190 13 KEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYS 64 (284)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667777777777766664 234457776533 44566677654
No 219
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=25.15 E-value=24 Score=38.34 Aligned_cols=6 Identities=33% Similarity=0.567 Sum_probs=0.0
Q ss_pred ccCCCC
Q 043305 750 QRSPVG 755 (892)
Q Consensus 750 ~r~P~~ 755 (892)
+||||.
T Consensus 13 ~r~pr~ 18 (381)
T PF05297_consen 13 RRPPRC 18 (381)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 356654
No 220
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=25.02 E-value=6.3e+02 Score=30.54 Aligned_cols=67 Identities=25% Similarity=0.181 Sum_probs=45.4
Q ss_pred ceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhh-cccEEEcCCCchHHHHHHHH
Q 043305 603 MICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKE-SSDIIILDDNFASVVKVVRW 681 (892)
Q Consensus 603 ~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAke-aaDiil~ddnf~sIv~~i~~ 681 (892)
++.++.-.++++=...|+.+++.|. -+++||++- ++.|++ --.-|+..+. .+|..++.+
T Consensus 122 ~i~~~~~~~~~e~~~~~~~l~~~G~-~~viG~~~~------------------~~~A~~~gl~~ili~s~-esi~~a~~~ 181 (526)
T TIGR02329 122 DIVQRSYVTEEDARSCVNDLRARGI-GAVVGAGLI------------------TDLAEQAGLHGVFLYSA-DSVRQAFDD 181 (526)
T ss_pred ceEEEEecCHHHHHHHHHHHHHCCC-CEEECChHH------------------HHHHHHcCCceEEEecH-HHHHHHHHH
Confidence 5678888899999999999999985 445688642 222222 1223333334 899999988
Q ss_pred HHHHHHHH
Q 043305 682 GRSVYANI 689 (892)
Q Consensus 682 GR~v~~nI 689 (892)
+..++.-.
T Consensus 182 A~~~~~~~ 189 (526)
T TIGR02329 182 ALDVARAT 189 (526)
T ss_pred HHHHHHHH
Confidence 88876644
No 221
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=23.93 E-value=1.6e+02 Score=33.22 Aligned_cols=59 Identities=31% Similarity=0.417 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCCeEEEe--CCCC------------------CChHhhhcC--CeeEeecCCCcH---hhhh--cccEEEc
Q 043305 616 LLLVQALRKRGDVVAVT--GDGT------------------NDAPALHEA--DIGLAMGIQGTE---VAKE--SSDIIIL 668 (892)
Q Consensus 616 ~~lV~~Lq~~g~vVa~t--GDG~------------------NDapALk~A--dVGIAmgi~gt~---vAke--aaDiil~ 668 (892)
..+++.|+++|..|+++ |-|- .|-|+|-+- ++.+.+|..-.+ .+.+ .+|++|+
T Consensus 69 ~~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 148 (325)
T PRK00652 69 IALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIIL 148 (325)
T ss_pred HHHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEE
Confidence 34567788888888888 3321 377766433 677777743222 2322 5899999
Q ss_pred CCCchH
Q 043305 669 DDNFAS 674 (892)
Q Consensus 669 ddnf~s 674 (892)
||.|..
T Consensus 149 DDGfQh 154 (325)
T PRK00652 149 DDGLQH 154 (325)
T ss_pred cCCccC
Confidence 999864
No 222
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=23.77 E-value=8.7e+02 Score=25.57 Aligned_cols=149 Identities=13% Similarity=0.096 Sum_probs=80.1
Q ss_pred cCCCchhHHHHHHHHHhCCCEEEEEecCCHHHHHHHHHHcCCCCC--cCCCCCCceecchhhhh----------------
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKVRMVTGDNIQTARAIALECGILTS--EADATEPNIIEGKSFRA---------------- 587 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v~mvTGDn~~TA~aIA~~~GI~~~--~~~~~~~~vi~G~~~~~---------------- 587 (892)
+..--+++.+.++.|.+.|+++.=+|=+++.....|.+-..-... +....-+.+++-++.+.
T Consensus 20 r~~~~~~a~~~~~al~~~Gi~~iEit~~~~~a~~~i~~l~~~~~~~p~~~vGaGTV~~~~~~~~a~~aGA~FivsP~~~~ 99 (213)
T PRK06552 20 RGESKEEALKISLAVIKGGIKAIEVTYTNPFASEVIKELVELYKDDPEVLIGAGTVLDAVTARLAILAGAQFIVSPSFNR 99 (213)
T ss_pred ECCCHHHHHHHHHHHHHCCCCEEEEECCCccHHHHHHHHHHHcCCCCCeEEeeeeCCCHHHHHHHHHcCCCEEECCCCCH
Confidence 444567788899999999999988888877755554443221110 00000011111111111
Q ss_pred -----------------cCHHHHHHHhcccccceEEEeccCHhhHHHHHHHHHHc--CCeEEEeCC-CCCChHhhhcCC-
Q 043305 588 -----------------LSETQREEIAGEDFGMICVMGRSSPSDKLLLVQALRKR--GDVVAVTGD-GTNDAPALHEAD- 646 (892)
Q Consensus 588 -----------------l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~lV~~Lq~~--g~vVa~tGD-G~NDapALk~Ad- 646 (892)
++.+|..........-+.+|-. .+ -....++.++.. +-.+..||- ...+++..-+|+
T Consensus 100 ~v~~~~~~~~i~~iPG~~T~~E~~~A~~~Gad~vklFPa-~~-~G~~~ik~l~~~~p~ip~~atGGI~~~N~~~~l~aGa 177 (213)
T PRK06552 100 ETAKICNLYQIPYLPGCMTVTEIVTALEAGSEIVKLFPG-ST-LGPSFIKAIKGPLPQVNVMVTGGVNLDNVKDWFAAGA 177 (213)
T ss_pred HHHHHHHHcCCCEECCcCCHHHHHHHHHcCCCEEEECCc-cc-CCHHHHHHHhhhCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 2456666666544445566531 12 225567777764 345556652 445777788888
Q ss_pred eeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHHHH
Q 043305 647 IGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRS 684 (892)
Q Consensus 647 VGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~GR~ 684 (892)
.++++| +. .... ..+.++..+.+..+.-+.
T Consensus 178 ~~vavg-s~--l~~~-----~~~~~~~~i~~~a~~~~~ 207 (213)
T PRK06552 178 DAVGIG-GE--LNKL-----ASQGDFDLITEKAKKYMS 207 (213)
T ss_pred cEEEEc-hH--HhCc-----cccCCHHHHHHHHHHHHH
Confidence 888887 22 2211 124567777665544333
No 223
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=23.48 E-value=6.4e+02 Score=23.86 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=40.5
Q ss_pred HHHHHHHcCCeEEEeCCCCC--ChHhhhcCCeeEeecCC-CcHhhhhcccEEEcCCCchHHHHHHHHHHHHHHHHHHHH
Q 043305 618 LVQALRKRGDVVAVTGDGTN--DAPALHEADIGLAMGIQ-GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFI 693 (892)
Q Consensus 618 lV~~Lq~~g~vVa~tGDG~N--DapALk~AdVGIAmgi~-gt~vAkeaaDiil~ddnf~sIv~~i~~GR~v~~nI~k~i 693 (892)
+++.+ .+=..|...|-|.| |..++++-+|-++=... .++...|.+ +.+--..-+.++.+.+|+..|+
T Consensus 54 ~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g~~~~aVAE~a--------~~T~e~~~~~~~~~~~ni~~~l 123 (133)
T PF00389_consen 54 VLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNVPGYNAEAVAEHA--------GYTDEARERMAEIAAENIERFL 123 (133)
T ss_dssp HHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-TTTTHHHHHHHH--------TGBHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEeCCcCCcchhccc--------hhHHHHHHHHHHHHHHHHHHHH
Confidence 44444 33468899999999 78899999998875421 122222322 4444444466777778877765
No 224
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=22.98 E-value=1.6e+02 Score=32.30 Aligned_cols=54 Identities=22% Similarity=0.347 Sum_probs=43.6
Q ss_pred CCcEEEEEEEe---cCCCchhHHHHHHHHHhCCCEEEEE-ecCCHHHHHHHHHHcCCC
Q 043305 515 DDLVLLAIVGI---KDPCRPSVKDAIRLCRIAGVKVRMV-TGDNIQTARAIALECGIL 568 (892)
Q Consensus 515 ~~l~~lGlvgi---~DplR~~v~~aI~~l~~AGI~v~mv-TGDn~~TA~aIA~~~GI~ 568 (892)
-++..+|++++ .+|--.++.+.++.+++.||+++.. +.-+..+++.+|++.|+.
T Consensus 188 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~ 245 (282)
T cd01017 188 YGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGAK 245 (282)
T ss_pred CCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCc
Confidence 47778888776 3455667788899999999997777 677789999999999974
No 225
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.81 E-value=1.1e+03 Score=26.39 Aligned_cols=63 Identities=16% Similarity=0.251 Sum_probs=33.7
Q ss_pred EeccCHhhHHHHHHHHHH--cCCeEEEeC-CCCCChH---hhhcCCeeEeecCCC---cHhhhhcccEEEcC
Q 043305 607 MGRSSPSDKLLLVQALRK--RGDVVAVTG-DGTNDAP---ALHEADIGLAMGIQG---TEVAKESSDIIILD 669 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~--~g~vVa~tG-DG~NDap---ALk~AdVGIAmgi~g---t~vAkeaaDiil~d 669 (892)
|.=|||.-=.++++...- .|..|+++| -+.-=.| .|.+++.-+.+--+- .+.+...||+++.-
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 456677655555554421 488888888 4444444 444555555433111 12234567887753
No 226
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.49 E-value=4.8e+02 Score=28.85 Aligned_cols=61 Identities=20% Similarity=0.348 Sum_probs=36.2
Q ss_pred EeccCHhhHHHHHHHHHH--cCCeEEEeCCC-CCChH---hhhc--CCeeEeecCCCcH---hhhhcccEEEcC
Q 043305 607 MGRSSPSDKLLLVQALRK--RGDVVAVTGDG-TNDAP---ALHE--ADIGLAMGIQGTE---VAKESSDIIILD 669 (892)
Q Consensus 607 ~aR~sP~dK~~lV~~Lq~--~g~vVa~tGDG-~NDap---ALk~--AdVGIAmgi~gt~---vAkeaaDiil~d 669 (892)
|.-|||.-=.++++...- .|..|.++|-+ .-=-| +|.. |.|-++- +.|. ..-..||+++.-
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~h--s~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICH--SKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEe--cChhHHHHHHhhCCEEEEC
Confidence 556777766666655532 38999999998 33444 5543 4444443 2332 134568888764
No 227
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=22.19 E-value=99 Score=29.02 Aligned_cols=29 Identities=14% Similarity=0.171 Sum_probs=24.8
Q ss_pred CchhHHHHHHHHHhCCCEEEEEecCCHHH
Q 043305 529 CRPSVKDAIRLCRIAGVKVRMVTGDNIQT 557 (892)
Q Consensus 529 lR~~v~~aI~~l~~AGI~v~mvTGDn~~T 557 (892)
--+++.++++.+|+.|++|+.+|+.....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNST 87 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCc
Confidence 45789999999999999999999976543
No 228
>PRK06846 putative deaminase; Validated
Probab=22.00 E-value=7.5e+02 Score=28.51 Aligned_cols=131 Identities=16% Similarity=0.166 Sum_probs=70.1
Q ss_pred CcEEEEEEEecCCC--chhHHHHHHHHHhCCCEEE-EEecCC--------HHHHHHHHHHcCCCCCcCCCCCCceecchh
Q 043305 516 DLVLLAIVGIKDPC--RPSVKDAIRLCRIAGVKVR-MVTGDN--------IQTARAIALECGILTSEADATEPNIIEGKS 584 (892)
Q Consensus 516 ~l~~lGlvgi~Dpl--R~~v~~aI~~l~~AGI~v~-mvTGDn--------~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~ 584 (892)
.+.-.+++.+.+.- +.+..+.++++.+.|..+. .+.-.. .......|++.|+.-... +-+...
T Consensus 158 ~~v~~~~~a~~~~g~~~~~~~~lL~~al~~Ga~~i~gl~p~~~~~~~~~~l~~~~~lA~~~g~~v~~H------v~e~~~ 231 (410)
T PRK06846 158 DGFTYEIVAFPQHGLLRSNSEPLMREAMKMGAHLVGGVDPASVDGAIEKSLDTMFQIAVDFNKGVDIH------LHDTGP 231 (410)
T ss_pred CcceEEEEeccCcccCCccHHHHHHHHHHcCCCEEeCCCCccCCcCHHHHHHHHHHHHHHhCCCcEEE------ECCCCC
Confidence 34445555554432 4556677888888875532 222222 566778888888763211 000000
Q ss_pred hhhcCHHHHHHHhcc-cc-cc-eEEEe----ccCHhhHHHHHHHHHHcCCeEEE---eCCCCCChHhhhcCCeeEeec
Q 043305 585 FRALSETQREEIAGE-DF-GM-ICVMG----RSSPSDKLLLVQALRKRGDVVAV---TGDGTNDAPALHEADIGLAMG 652 (892)
Q Consensus 585 ~~~l~~~e~~~i~~~-~~-~~-~~V~a----R~sP~dK~~lV~~Lq~~g~vVa~---tGDG~NDapALk~AdVGIAmg 652 (892)
-.....++.-+.+.+ .+ .+ ....+ ..+.++-.++++.+++.|-.|+. .|.|......|++++|-+++|
T Consensus 232 ~~~~~~~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~~~~g~~p~~~l~~~Gv~v~lG 309 (410)
T PRK06846 232 LGVATIKYLVETTEEAQWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITSTVPIGRLHMPIPLLHDKGVKVSLG 309 (410)
T ss_pred hhHHHHHHHHHHHHHhCCCCCEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCCCCCCCCCHHHHHhCCCeEEEe
Confidence 000000111111111 01 01 11222 23555556778899999866554 488999999999999999887
No 229
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=21.80 E-value=2e+02 Score=24.53 Aligned_cols=47 Identities=17% Similarity=0.190 Sum_probs=36.2
Q ss_pred EEEecCCCchhHHHHHHHHHhCCCEEEEEe-cCCHHHHHHHHHHcCCC
Q 043305 522 IVGIKDPCRPSVKDAIRLCRIAGVKVRMVT-GDNIQTARAIALECGIL 568 (892)
Q Consensus 522 lvgi~DplR~~v~~aI~~l~~AGI~v~mvT-GDn~~TA~aIA~~~GI~ 568 (892)
++...+..++.+.+..+.++++|++|.+.. +.+..-....|...|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 444556677888889999999999998854 44777778888887764
No 230
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.79 E-value=1.7e+02 Score=32.28 Aligned_cols=54 Identities=19% Similarity=0.102 Sum_probs=42.8
Q ss_pred CCcEEEEEEEe---cCCCchhHHHHHHHHHhCCCEEEEE-ecCCHHHHHHHHHHcCCC
Q 043305 515 DDLVLLAIVGI---KDPCRPSVKDAIRLCRIAGVKVRMV-TGDNIQTARAIALECGIL 568 (892)
Q Consensus 515 ~~l~~lGlvgi---~DplR~~v~~aI~~l~~AGI~v~mv-TGDn~~TA~aIA~~~GI~ 568 (892)
-++..+|++++ .+|--.+..+.++.+++.||++++. .+-+...++.||+++|+.
T Consensus 194 yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv~ 251 (287)
T cd01137 194 YGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGAK 251 (287)
T ss_pred cCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 47788888776 3444556688889999999997765 666788999999999984
No 231
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=21.05 E-value=2e+02 Score=25.37 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=39.5
Q ss_pred EEEEEecC---CCchhHHHHHHHHHhCCCEEEEE-ecCCHHHHHHHHHHcCCC
Q 043305 520 LAIVGIKD---PCRPSVKDAIRLCRIAGVKVRMV-TGDNIQTARAIALECGIL 568 (892)
Q Consensus 520 lGlvgi~D---plR~~v~~aI~~l~~AGI~v~mv-TGDn~~TA~aIA~~~GI~ 568 (892)
+.++.+.+ ...+-+.+..+.|+++||++.+- ++++......-|...|+.
T Consensus 2 v~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 2 VVIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 34566666 67778889999999999998887 677777888888888886
No 232
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.00 E-value=2.8e+02 Score=30.73 Aligned_cols=44 Identities=14% Similarity=0.316 Sum_probs=28.9
Q ss_pred cCCCchhHHHHHHHHHhCCCEE---EEEecCCHHHH------HHHHHHcCCCC
Q 043305 526 KDPCRPSVKDAIRLCRIAGVKV---RMVTGDNIQTA------RAIALECGILT 569 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~v---~mvTGDn~~TA------~aIA~~~GI~~ 569 (892)
.+.+++++++.++.+++.|++. .+.-||++... ..-|+++||..
T Consensus 12 a~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 12 AKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456777888888887777653 45567776654 33566777754
No 233
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.81 E-value=3.1e+02 Score=30.42 Aligned_cols=44 Identities=18% Similarity=0.225 Sum_probs=30.3
Q ss_pred cCCCchhHHHHHHHHHhCCCE---EEEEecCCHHHH------HHHHHHcCCCC
Q 043305 526 KDPCRPSVKDAIRLCRIAGVK---VRMVTGDNIQTA------RAIALECGILT 569 (892)
Q Consensus 526 ~DplR~~v~~aI~~l~~AGI~---v~mvTGDn~~TA------~aIA~~~GI~~ 569 (892)
...+++++++-|+.+++.|++ +.+..||++... ..-|+++||..
T Consensus 11 A~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 11 AKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 345677888888888877775 556678886654 34567778764
No 234
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=20.43 E-value=90 Score=31.26 Aligned_cols=23 Identities=35% Similarity=0.507 Sum_probs=20.6
Q ss_pred chhHHHHHHHHHhCCCEEEEEec
Q 043305 530 RPSVKDAIRLCRIAGVKVRMVTG 552 (892)
Q Consensus 530 R~~v~~aI~~l~~AGI~v~mvTG 552 (892)
-++|+++++++++.|.+++|+|-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 45799999999999999999994
No 235
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=20.42 E-value=9.3e+02 Score=29.24 Aligned_cols=66 Identities=21% Similarity=0.116 Sum_probs=42.2
Q ss_pred ceEEEeccCHhhHHHHHHHHHHcCCeEEEeCCCCCChHhhhcCCeeEeecCCCcHhhhhcccEEEcCCCchHHHHHHHHH
Q 043305 603 MICVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWG 682 (892)
Q Consensus 603 ~~~V~aR~sP~dK~~lV~~Lq~~g~vVa~tGDG~NDapALk~AdVGIAmgi~gt~vAkeaaDiil~ddnf~sIv~~i~~G 682 (892)
++..+.-.++++=...|+.++++|. -+++||++- ++.|+++-=--+.+-+-.+|..++..+
T Consensus 132 ~i~~~~~~~~~e~~~~v~~lk~~G~-~~vvG~~~~------------------~~~A~~~g~~g~~~~s~e~i~~a~~~A 192 (538)
T PRK15424 132 RIEQRSYVTEEDARGQINELKANGI-EAVVGAGLI------------------TDLAEEAGMTGIFIYSAATVRQAFEDA 192 (538)
T ss_pred ceEEEEecCHHHHHHHHHHHHHCCC-CEEEcCchH------------------HHHHHHhCCceEEecCHHHHHHHHHHH
Confidence 5677888899999999999999985 445688653 222332211111112347888888777
Q ss_pred HHHHH
Q 043305 683 RSVYA 687 (892)
Q Consensus 683 R~v~~ 687 (892)
...+.
T Consensus 193 ~~~~~ 197 (538)
T PRK15424 193 LDMTR 197 (538)
T ss_pred HHHHH
Confidence 66554
No 236
>PRK13670 hypothetical protein; Provisional
Probab=20.25 E-value=7.2e+02 Score=28.78 Aligned_cols=97 Identities=19% Similarity=0.167 Sum_probs=63.7
Q ss_pred EEEEEEEecCCCchhHHHHHHHHHh---CCCEEEEEecC----------CHHHHHHHHHHcCCCCCcCCCCCCceecchh
Q 043305 518 VLLAIVGIKDPCRPSVKDAIRLCRI---AGVKVRMVTGD----------NIQTARAIALECGILTSEADATEPNIIEGKS 584 (892)
Q Consensus 518 ~~lGlvgi~DplR~~v~~aI~~l~~---AGI~v~mvTGD----------n~~TA~aIA~~~GI~~~~~~~~~~~vi~G~~ 584 (892)
..+|+|.=-||+=.|-...|+++++ +|..+.+++|+ +...-..+|.++|+. .+++-+
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD---------~vielp- 71 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVD---------LVVELP- 71 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCC---------EEEEeC-
Confidence 4689999999999999999988875 47777777876 334445566667764 333321
Q ss_pred hhhcCHHHHHHHhcccccceEEEeccCHhhHHH-HHHHHHHcCCeEEEeCCCCCChHhhhc
Q 043305 585 FRALSETQREEIAGEDFGMICVMGRSSPSDKLL-LVQALRKRGDVVAVTGDGTNDAPALHE 644 (892)
Q Consensus 585 ~~~l~~~e~~~i~~~~~~~~~V~aR~sP~dK~~-lV~~Lq~~g~vVa~tGDG~NDapALk~ 644 (892)
.. ||..+|++=.. -|+.|...|-...++|.-..|...|++
T Consensus 72 -------------------f~-~a~~sae~F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 72 -------------------FL-YSVQSADFFAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred -------------------Cc-hHhCCHHHHHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 11 67777765443 355665567667777876556555543
No 237
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=20.18 E-value=1.2e+02 Score=25.10 Aligned_cols=24 Identities=25% Similarity=0.407 Sum_probs=17.9
Q ss_pred hhHHHHHHHHHhCCCEEEEEecCC
Q 043305 531 PSVKDAIRLCRIAGVKVRMVTGDN 554 (892)
Q Consensus 531 ~~v~~aI~~l~~AGI~v~mvTGDn 554 (892)
|+-+++++.|.+||++|.|.|.+.
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~e 25 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSE 25 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHH
Confidence 567899999999999999988643
Done!