BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043310
(359 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1
Length = 342
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 207/325 (63%), Gaps = 8/325 (2%)
Query: 35 YKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVAN 94
++L+ L + ++G T+ + + D+ G+ +D+VLGF +K+Y + YFGA+VGRVAN
Sbjct: 22 FQLQSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFAELKEYLQKHPYFGAVVGRVAN 81
Query: 95 RISRAQFTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQG 154
RI++ FTL+G Y+L N+G N LHGG RGF +V+W + +++ I F+ S +GE+G
Sbjct: 82 RIAKGTFTLDGKEYKLAINNGPNSLHGGVRGFDKVLWTPRV--LSNGIEFSRVSPDGEEG 139
Query: 155 FPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALHTYWNLGGHSSGDIFSHKLQLF 214
+PG+L V VTY G LVV +A+ + TPVNL H+Y+NL G S +I+ H++ +
Sbjct: 140 YPGELKVWVTYTLDG-GELVVNYRAQ-ASQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIE 197
Query: 215 GSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELP-DGYDINYVLDNPNPEHLK 273
PV++ LIPTG+I PV GT +D +P E+G +E +G+D N+ L +
Sbjct: 198 ADAFLPVDETLIPTGEIAPVQGTAFDLRKPVELGKHLQEFHINGFDHNFCLKRSKEKQF- 256
Query: 274 KVAVVSESVSGRKMELWTNKPGVQFYTSNML-GKVMGKDGFVYSNYAGFCLETQGFPDSV 332
A V + SGR +E++T +PG+QFYT N L G + GK G VY ++GFCLETQ +P++V
Sbjct: 257 -CARVHHAGSGRVLEVYTTQPGIQFYTGNFLDGTLKGKTGAVYPKHSGFCLETQNWPNAV 315
Query: 333 NNPNFPSQVVNPGETYNHVMVYRFT 357
N P+FP ++ PGE YNH + F+
Sbjct: 316 NQPHFPPVLLKPGEEYNHTTWFVFS 340
>sp|Q66HG4|GALM_RAT Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1
Length = 342
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 204/329 (62%), Gaps = 8/329 (2%)
Query: 31 AVGVYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVG 90
AV ++L+ L++ ++G T+ + + D+ GK +D+VLGF ++ Y YFGA+VG
Sbjct: 18 AVEKFQLRSDQLNVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQKQPYFGAVVG 77
Query: 91 RVANRISRAQFTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLE 150
RVANRI++ +FT++G Y L N N LHGG RGF +V+W + +++ + F+ S +
Sbjct: 78 RVANRIAKGRFTVDGKEYHLPINREPNSLHGGFRGFDKVLWTPQV--LSNGVQFSRVSPD 135
Query: 151 GEQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALHTYWNLGGHSSGDIFSHK 210
GE+G+PG+L V VTY G LVV +A+ + TPVNL H+Y+NL G S DI+ H+
Sbjct: 136 GEEGYPGELKVWVTYTLDG-GELVVNYRAQ-ASQTTPVNLTNHSYFNLAGQGSPDIYDHE 193
Query: 211 LQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELP-DGYDINYVLDNPNP 269
+ + PV++ LIPTG I PV GT +D +P E+G + G+D N+ L
Sbjct: 194 VTIAADAYLPVDETLIPTGVIAPVEGTAFDLRKPVELGKHLQSYHIHGFDHNFCLKESKE 253
Query: 270 EHLKKVAVVSESVSGRKMELWTNKPGVQFYTSNML-GKVMGKDGFVYSNYAGFCLETQGF 328
+ K A V + SGR +E++T +PGVQFYT N L G + GK G VY ++GFCLETQ +
Sbjct: 254 K--KFCARVHHAASGRILEVYTTQPGVQFYTGNFLDGTLKGKSGEVYPKHSGFCLETQNW 311
Query: 329 PDSVNNPNFPSQVVNPGETYNHVMVYRFT 357
PD+VN P FP ++ PGE YNH ++F+
Sbjct: 312 PDAVNQPQFPPILLRPGEEYNHTTWFKFS 340
>sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1
Length = 342
Score = 258 bits (660), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 204/325 (62%), Gaps = 8/325 (2%)
Query: 35 YKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVAN 94
++L+ L + ++G T+ + + D+ G+ +D+VLGFD ++ Y YFGA+VGRVAN
Sbjct: 22 FQLQSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFDELEGYLQKQPYFGAVVGRVAN 81
Query: 95 RISRAQFTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQG 154
RI++ FTL+G Y+L N+G N LHGG +GF +V+W + +++ + F+ S +GE+G
Sbjct: 82 RIAKGTFTLDGKEYKLAINNGPNSLHGGVKGFDKVLWTPRV--LSNGVEFSRVSPDGEEG 139
Query: 155 FPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALHTYWNLGGHSSGDIFSHKLQLF 214
+PG+L V V Y G LVV +A+ + TPVNL H+Y+NL G S +I+ H++ +
Sbjct: 140 YPGELKVWVMYTLDG-GELVVNYRAQA-SQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIE 197
Query: 215 GSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELP-DGYDINYVLDNPNPEHLK 273
PV++ LIPTG+I V GT +D +P E+G +E +G+D N+ L +
Sbjct: 198 ADAFLPVDEVLIPTGEIASVQGTAFDLRKPVELGKHLQEFHVNGFDHNFCLKGSKEKRF- 256
Query: 274 KVAVVSESVSGRKMELWTNKPGVQFYTSNML-GKVMGKDGFVYSNYAGFCLETQGFPDSV 332
A V + SGR +E++T +PGVQFYT N L G + GK G Y ++GFCLETQ +PD+V
Sbjct: 257 -CARVHHAGSGRVLEVYTTQPGVQFYTGNFLDGTLKGKSGAGYPKHSGFCLETQSWPDAV 315
Query: 333 NNPNFPSQVVNPGETYNHVMVYRFT 357
N P+FP ++ PGE Y+H ++F+
Sbjct: 316 NQPHFPPVLLKPGEEYDHTTWFKFS 340
>sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1
Length = 342
Score = 258 bits (659), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 203/325 (62%), Gaps = 8/325 (2%)
Query: 35 YKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVAN 94
++L+ L + ++G T+ + + D+ G+ +D+VLGF ++ Y YFGA++GRVAN
Sbjct: 22 FQLQSDLLRVDIISWGCTITALEVKDRQGRSSDVVLGFAELEGYLQKQPYFGAVIGRVAN 81
Query: 95 RISRAQFTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQG 154
RI++ F ++G Y L N N LHGG RGF +V+W + +++ I F+ S +GE+G
Sbjct: 82 RIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRV--LSNGIQFSRISPDGEEG 139
Query: 155 FPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALHTYWNLGGHSSGDIFSHKLQLF 214
+PG+L V VTY G LVV +A+ +ATPVNL H+Y+NL G S +I+ H++ +
Sbjct: 140 YPGELKVWVTYTLDG-GELVVNYRAQ-ASQATPVNLTNHSYFNLAGQGSPNIYDHEVTIE 197
Query: 215 GSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELP-DGYDINYVLDNPNPEHLK 273
PV++ LIPTG++ PV GT +D +P E+G ++ +G+D N+ L +H
Sbjct: 198 ADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEKHF- 256
Query: 274 KVAVVSESVSGRKMELWTNKPGVQFYTSNML-GKVMGKDGFVYSNYAGFCLETQGFPDSV 332
A V + SGR +E++T +PGVQFY N L G + GK+G VY ++GFCLETQ +PD+V
Sbjct: 257 -CARVHHAASGRVLEVYTTQPGVQFYMGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAV 315
Query: 333 NNPNFPSQVVNPGETYNHVMVYRFT 357
N P FP ++ PGE Y+H ++F+
Sbjct: 316 NQPRFPPVLLRPGEEYDHTTWFKFS 340
>sp|Q96C23|GALM_HUMAN Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1
Length = 342
Score = 258 bits (659), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 204/325 (62%), Gaps = 8/325 (2%)
Query: 35 YKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVAN 94
++L+ L + ++G T+ + + D+ G+ +D+VLGF ++ Y YFGA++GRVAN
Sbjct: 22 FQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVAN 81
Query: 95 RISRAQFTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQG 154
RI++ F ++G Y L N N LHGG RGF +V+W + +++ + F+ S +GE+G
Sbjct: 82 RIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRV--LSNGVQFSRISPDGEEG 139
Query: 155 FPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALHTYWNLGGHSSGDIFSHKLQLF 214
+PG+L V VTY G L+V +A+ +ATPVNL H+Y+NL G +S +I H++ +
Sbjct: 140 YPGELKVWVTYTLDG-GELIVNYRAQ-ASQATPVNLTNHSYFNLAGQASPNINDHEVTIE 197
Query: 215 GSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELP-DGYDINYVLDNPNPEHLK 273
PV++ LIPTG++ PV GT +D +P E+G ++ +G+D N+ L +H
Sbjct: 198 ADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEKHF- 256
Query: 274 KVAVVSESVSGRKMELWTNKPGVQFYTSNML-GKVMGKDGFVYSNYAGFCLETQGFPDSV 332
A V + SGR +E++T +PGVQFYT N L G + GK+G VY ++GFCLETQ +PD+V
Sbjct: 257 -CARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAV 315
Query: 333 NNPNFPSQVVNPGETYNHVMVYRFT 357
N P FP ++ PGE Y+H ++F+
Sbjct: 316 NQPRFPPVLLRPGEEYDHTTWFKFS 340
>sp|Q8K157|GALM_MOUSE Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV=1
Length = 342
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 200/325 (61%), Gaps = 8/325 (2%)
Query: 35 YKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVAN 94
++L+ LS+ ++G T+ + + D+ GK +D+VLGF ++ Y YFGA+VGRVAN
Sbjct: 22 FQLRSDQLSVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQKQPYFGAVVGRVAN 81
Query: 95 RISRAQFTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQG 154
RI++ +FT+ G Y L N N LHGG GF +V+W + + + + F S +GE+G
Sbjct: 82 RIAKGRFTIGGKEYHLPVNREPNSLHGGFTGFDKVLWTPQV--LTNGVQFFRVSPDGEEG 139
Query: 155 FPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALHTYWNLGGHSSGDIFSHKLQLF 214
+PG+L V VTY G LV+ +A+ + TPVNL H+Y+NL G S +I+ H++ +
Sbjct: 140 YPGELKVWVTYTLDG-GELVINYRAQ-ASQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIA 197
Query: 215 GSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELP-DGYDINYVLDNPNPEHLK 273
PV++ LIPTG I PV GT +D +P E+G+ ++ G+D N+ L + K
Sbjct: 198 ADAYLPVDETLIPTGVIAPVEGTAFDLRKPVELGTHLQDYHIHGFDHNFCLKESKEK--K 255
Query: 274 KVAVVSESVSGRKMELWTNKPGVQFYTSNML-GKVMGKDGFVYSNYAGFCLETQGFPDSV 332
A V + SGR +E++T +PGVQFYT N L G + GK+G VY ++G CLETQ +PDSV
Sbjct: 256 FCARVRHAASGRILEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGLCLETQNWPDSV 315
Query: 333 NNPNFPSQVVNPGETYNHVMVYRFT 357
N P FP ++ PGE YNH ++F+
Sbjct: 316 NQPQFPPALLRPGEEYNHTTWFKFS 340
>sp|P05149|GALM_ACICA Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1
Length = 381
Score = 221 bits (564), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 192/353 (54%), Gaps = 18/353 (5%)
Query: 21 KKCQATESCEAVGVYKLKRGD-LSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYK 79
K T++ + V +Y + + +S+ F ++G + + PD GK +IVLGFD +K Y+
Sbjct: 26 KSYGTTQNGQKVDLYTMSNNNGVSVSFISFGGVITQILTPDAQGKQNNIVLGFDDLKGYE 85
Query: 80 TDNT----YFGAIVGRVANRISRAQFTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVK- 134
+T +FG ++GR ANRI A+F+L+G Y L N+G N LH G GF + +W+VK
Sbjct: 86 VTDTKEGIHFGGLIGRYANRIGNAKFSLDGKTYNLEKNNGPNSLHSGNPGFDKRVWQVKP 145
Query: 135 --SHEVNSHITFTYNSLEGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLAL 192
S + S G+QGFPG L V V Y +N ++ KAK ++ T VNL
Sbjct: 146 LVSKGETVKASLKLTSPNGDQGFPGKLDVEVIYSLSDQNEFKIEYKAK-TDQPTVVNLTN 204
Query: 193 HTYWNLGGHSSG--DIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSK 250
H+Y+NL G + + H +QL + + +PTG+I V GTP+DF P+ I
Sbjct: 205 HSYFNLSGAGNNPYGVLDHVVQLNAGRILVTDQNSLPTGEIASVAGTPFDFRMPKAIVKD 264
Query: 251 FKELPD------GYDINYVLDNPNPEHLKKVAVVSESVSGRKMELWTNKPGVQFYTSN-M 303
+ GYD +V++ + L A+V + S R M++ T +P VQ YT++ +
Sbjct: 265 IRANNQQLAYGYGYDQTWVINQKSQGKLNLAAIVVDPKSKRTMQVLTTEPSVQMYTADHL 324
Query: 304 LGKVMGKDGFVYSNYAGFCLETQGFPDSVNNPNFPSQVVNPGETYNHVMVYRF 356
LG ++G +G +Y LETQ FPDS N P FPS +NP +TYN V V++F
Sbjct: 325 LGNIVGANGVLYRQADALALETQHFPDSPNQPTFPSTRLNPNQTYNSVTVFKF 377
>sp|P0A9C4|GALM_SHIFL Aldose 1-epimerase OS=Shigella flexneri GN=galM PE=3 SV=1
Length = 346
Score = 191 bits (486), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 179/326 (54%), Gaps = 13/326 (3%)
Query: 42 LSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQF 101
+ + ++GAT+LSA IP +G + + +LG S + Y+ + GA +GR ANRI+ +++
Sbjct: 26 MVVTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRY 85
Query: 102 TLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQGFPGDLAV 161
T +G L + G N LHGGP GF + W++ + + + F +S +G+QGFPG+L
Sbjct: 86 TFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQN-DRQVLFALSSDDGDQGFPGNLGA 144
Query: 162 SVTYMFVGENNLVVKMKAKPLEKATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPV 221
+V Y +N + + +A ++K PVN+ H Y+NL G S D+ +HKLQ+ PV
Sbjct: 145 TVQYRLTDDNRISITYRAT-VDKPCPVNMTNHVYFNLDGEQS-DVRNHKLQILADEYLPV 202
Query: 222 NDRLIPTGKITPVTGTPYDFLQPREIGSKFKELPD-----GYDINYVLDNPNPEHLKKVA 276
++ IP + V GT +DF + I S+F D GYD ++L KKVA
Sbjct: 203 DEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKG--DGKKVA 260
Query: 277 VVSESVSGR-KMELWTNKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQGFPDSVNNP 335
S + +++++T P +QFY+ N LG + Y+++ G LE++ PDS N+P
Sbjct: 261 AHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHP 320
Query: 336 NFPSQ--VVNPGETYNHVMVYRFTAD 359
+P + PGE Y+ + Y+F A+
Sbjct: 321 EWPQPDCFLRPGEEYSSLTEYQFIAE 346
>sp|P0A9C3|GALM_ECOLI Aldose 1-epimerase OS=Escherichia coli (strain K12) GN=galM PE=1
SV=1
Length = 346
Score = 191 bits (486), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 179/326 (54%), Gaps = 13/326 (3%)
Query: 42 LSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQF 101
+ + ++GAT+LSA IP +G + + +LG S + Y+ + GA +GR ANRI+ +++
Sbjct: 26 MVVTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRY 85
Query: 102 TLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQGFPGDLAV 161
T +G L + G N LHGGP GF + W++ + + + F +S +G+QGFPG+L
Sbjct: 86 TFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQN-DRQVLFALSSDDGDQGFPGNLGA 144
Query: 162 SVTYMFVGENNLVVKMKAKPLEKATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPV 221
+V Y +N + + +A ++K PVN+ H Y+NL G S D+ +HKLQ+ PV
Sbjct: 145 TVQYRLTDDNRISITYRAT-VDKPCPVNMTNHVYFNLDGEQS-DVRNHKLQILADEYLPV 202
Query: 222 NDRLIPTGKITPVTGTPYDFLQPREIGSKFKELPD-----GYDINYVLDNPNPEHLKKVA 276
++ IP + V GT +DF + I S+F D GYD ++L KKVA
Sbjct: 203 DEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKG--DGKKVA 260
Query: 277 VVSESVSGR-KMELWTNKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQGFPDSVNNP 335
S + +++++T P +QFY+ N LG + Y+++ G LE++ PDS N+P
Sbjct: 261 AHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHP 320
Query: 336 NFPSQ--VVNPGETYNHVMVYRFTAD 359
+P + PGE Y+ + Y+F A+
Sbjct: 321 EWPQPDCFLRPGEEYSSLTEYQFIAE 346
>sp|P31765|GALM_HAEIN Aldose 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=galM PE=3 SV=2
Length = 340
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 169/301 (56%), Gaps = 13/301 (4%)
Query: 42 LSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQF 101
+ ++F ++GAT LS +P N L +++LG V +Y T +Y GA VGR ANRI+ AQF
Sbjct: 26 MRVQFMDWGATWLSCKVP-VNDTLREVLLGC-KVDNYPTHQSYLGASVGRYANRIANAQF 83
Query: 102 TLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQGFPGDLAV 161
LNG +L +N G + LHGG GF + W ++ N + F+ +S++G+QGFPG++ V
Sbjct: 84 ELNGELIKLSSNQGKHQLHGG-EGFDKRRWNIQECGEN-FVCFSLHSVDGDQGFPGNVDV 141
Query: 162 SVTYMFVGENNLVVKMKAKPLEKATPVNLALHTYWNLGGHSSG-DIFSHKLQLFGSHVTP 220
SVTY G+N++ ++ A +K T +NL HTY+NL G D+ H L+L P
Sbjct: 142 SVTYTLTGDNSVKIEY-AGMCDKDTALNLTNHTYFNLENAEQGSDVREHTLRLNADFYLP 200
Query: 221 VNDRLIPTGKITPVTGTPYDFLQPREIGSKF----KELPDGYDINYVLDNPNPEHLKKVA 276
V++ IP + V T +DF + I F ++ GYD ++++ N K
Sbjct: 201 VDNEGIPNSPLKHVVNTSFDFRIAKPIKQDFLQGDQQATKGYDHSFIV---NKAWQKPCV 257
Query: 277 VVSESVSGRKMELWTNKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQGFPDSVNNPN 336
+++ +E+ T++ +Q YT N L ++G +Y++++G LETQ PD+ N+P
Sbjct: 258 LLTSPTGDLSLEVRTSQAALQVYTGNYLAGTPTRNGELYADFSGIALETQCLPDTPNHPE 317
Query: 337 F 337
+
Sbjct: 318 W 318
>sp|P21955|GALM_STRTR Aldose 1-epimerase OS=Streptococcus thermophilus GN=galM PE=3 SV=1
Length = 348
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 178/345 (51%), Gaps = 21/345 (6%)
Query: 28 SCEAVGVYKLKRGDLS-----------LKFTNYGATMLSAVIPDKNGKLADIVLGFDSVK 76
SCE +G K+ GD+S + GAT+ ++P + G L +IVLGF +
Sbjct: 4 SCEIIG--KVDSGDVSKISMENNNGVVISTLTTGATLQEFLVPMETGALKNIVLGFSDFE 61
Query: 77 DYKTDNTYFGAIVGRVANRISRAQFTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSH 136
DY +N +GRVA RI +A +T N Y L N+GDN LHGGP+G W ++
Sbjct: 62 DYYKNNLCACQSIGRVAGRIGKASYTHNMVLYSLPKNEGDNCLHGGPKGMQVQNWNYVTN 121
Query: 137 EVNSHIT--FTYNSLEGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALHT 194
+ ++ F GFPGD+ VS++Y N L + +A + ++T N H
Sbjct: 122 LNDDYVETKFIRRLYSSVDGFPGDVTVSISYRLNNNNRLTILFEAFDVTESTVFNPTNHV 181
Query: 195 YWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKEL 254
Y+NL D+ SH+LQ++ + ++ LIPTG+ V T YDF + ++ + E
Sbjct: 182 YFNLSDKQ--DLSSHELQIYSDYRLELDSELIPTGQKINVDETNYDFRKTTDLLPRI-EA 238
Query: 255 PDGYDINYVLDNPNPEHLKKVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKVM--GKD- 311
+G+D +V+ +H+K+VA++ + SG +E+++N+ G+ +T + + + +D
Sbjct: 239 NNGFDDAFVVGGGTCDHVKEVAILHDKESGDGIEIFSNRNGLVIFTMDDIEDNIYFARDK 298
Query: 312 GFVYSNYAGFCLETQGFPDSVNNPNFPSQVVNPGETYNHVMVYRF 356
G + +E Q PD+VN+ F +++ G + N+ + +++
Sbjct: 299 GKMAKRREAIAMEAQTLPDAVNHKGFGDIILDKGHSVNYEIGFQY 343
>sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2
SV=1
Length = 689
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 68/350 (19%)
Query: 40 GDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDY-KTDNTYFGAIVGRVANRISR 98
G + +N+GAT+++A + NG + LGFD++K Y + DN +FGA +GRVANRIS+
Sbjct: 372 GKFEVSISNHGATIVAAKL---NG--IKLNLGFDNLKGYLREDNPFFGATIGRVANRISK 426
Query: 99 AQFTLNGTRYQL-INNDGDNMLHGGPRGFSEV-----IWKVKSHEVNSHITFTYNSLEGE 152
+NGT YQ+ +N LHGG G+++ I K E + + F L+G
Sbjct: 427 GDLLINGTHYQVGLNELHRTSLHGGTYGYNKRTFLGPIVKTNEKEKETTMEFVLIDLDGT 486
Query: 153 QGFPGDLAVSVTYMF----VGENNLVVKMKAKPLEK----ATPVNLALHTYWNLGGHSSG 204
+G+PGD+ V Y VG L ++ +AK LE+ +T V+L H+YWN+G S
Sbjct: 487 EGYPGDVETKVIYTVRDTGVG-GELGIEYEAKLLEESGRDSTAVSLTNHSYWNIGNQPS- 544
Query: 205 DIFSHKLQLFGSHVTPVNDRLI--------PTGKITPVTGTPYDFLQPREIGSKFKELPD 256
+ G+H+ V+++ + PTGKI VT T D ++G PD
Sbjct: 545 --------IEGTHIKLVSNKHLESNPLDSTPTGKI--VTSTDLDSQNSAKLG------PD 588
Query: 257 G--YDINYV------LDNPNPEHLKKVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKVM 308
G +D +V LD N E L+ VA + + T +P QFYT + + V
Sbjct: 589 GPVFDYCFVTKQQDKLDTRNDE-LRVVATATHPKTRIAFTTLTTEPAFQFYTGDGV-DVA 646
Query: 309 GKDGFVYSNYAGFCLETQGFPDSVNNPNF--PSQVVNPGETYNHVMVYRF 356
G V++ +GFCLE + + NP + P +N GE Y +YRF
Sbjct: 647 G----VFTKRSGFCLEASRY---IYNPKWFIP---LNKGEVYGSYTIYRF 686
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 160/338 (47%), Gaps = 31/338 (9%)
Query: 34 VYKLKRG-DLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYK-TDNTYFGAIVGR 91
V L +G +K N GAT++ V+ NG +V D+ +YK N +FGA VG
Sbjct: 364 VVSLGKGTSFEVKLANLGATIVDIVV---NG--CSVVASLDNETEYKDQSNPFFGATVGP 418
Query: 92 VANRISRAQFTLNGTRYQL-INNDGDNMLHGGPRGFSEVIWK---VKSHEVNSHI-TFTY 146
ANRI+ F +NG R QL ++ + N++H G + + VK+ E +HI T +
Sbjct: 419 YANRIANGTFEINGKRIQLTVSKEDGNVVHSGINSYHSKKFLGPIVKNPE--AHIWTADF 476
Query: 147 NSLEGEQGFPGDLAVSVTYMFVGEN-NLVVKMKAKPL-EKATPVNLALHTYWNLGGHSSG 204
++ E FP L+ V Y E L V+ ++K + +T N+ HTY+NL +
Sbjct: 477 KYVDEETEFPARLSTLVRYKVDSEKKTLTVEYESKVAGQGSTGANITNHTYFNLNKFNEA 536
Query: 205 DIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELPDGYDINYVL 264
I K+QL + VN++L+PTG + T P EI K L D +V
Sbjct: 537 TIKGSKVQLIDNTGLEVNNKLLPTGNLKKYTQVATFNDSPTEITEKEPVL----DFCFVS 592
Query: 265 DNP-----NPEHLKKVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKVMGKDGFVYSNYA 319
P L V +S + ++E+ T +P Q YT + V KD Y N A
Sbjct: 593 GLPAKLDTRSSPLTPVFKLSNEDAKLEVEVATTEPTFQVYTGDY---VDVKDK--YENRA 647
Query: 320 GFCLETQGFPDSVNNPNFPSQVVNP-GETYNHVMVYRF 356
G C E + D+VNNP + S VV P GETY H + Y F
Sbjct: 648 GICCEPGRYIDAVNNPEWKSSVVLPAGETYGHKLSYTF 685
>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GAL10 PE=1 SV=2
Length = 699
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 32/328 (9%)
Query: 46 FTNYGATMLSAVIPDKNGKLADIVLGFDSVKDY-KTDNTYFGAIVGRVANRISRAQFTLN 104
F N GA+++ + NG+ +VLG+++ + Y D+ Y GA +GR ANRIS+ +F+L
Sbjct: 388 FANLGASIVDLKV---NGQ--SVVLGYENEEGYLNPDSAYIGATIGRYANRISKGKFSLC 442
Query: 105 GTRYQLINNDGDNMLHGGPRGF--SEVIWKVKSHEVNSHITFTYNSLEGEQG--FPGDLA 160
YQL N+G N H F + + + T Y ++ E+ FPGDL
Sbjct: 443 NKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQNPSKDVFTAEYMLIDNEKDTEFPGDLL 502
Query: 161 VSVTYMF-VGENNLVVKMKAKPLE-KATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHV 218
V++ Y V + +L + K K +ATP+NL H+Y+NL I ++ +
Sbjct: 503 VTIQYTVNVAQKSLEMVYKGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKS 562
Query: 219 TPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELPDGYDINYVLD-NPNPEHL----K 273
V+ +IPTG I ++ +P +G K + +D +V+D N P +
Sbjct: 563 VDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQ----FDCCFVVDENAKPSQINTLNN 618
Query: 274 KVAVVSESV---SGRKMELWTNKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQGFPD 330
++ ++ ++ S +E+ + +P QFYT + L Y GF +E + D
Sbjct: 619 ELTLIVKAFHPDSNITLEVLSTEPTYQFYTGDFLSA-------GYEARQGFAIEPGRYID 671
Query: 331 SVNNPNFPSQV-VNPGETYNHVMVYRFT 357
++N N+ V + GETY +VYRF+
Sbjct: 672 AINQENWKDCVTLKNGETYGSKIVYRFS 699
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 146/332 (43%), Gaps = 50/332 (15%)
Query: 41 DLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYK-TDNTYFGAIVGRVANRISRA 99
DL + NYGA + + +N +V GF+ YK +N +FGA +GR ANRI+
Sbjct: 377 DLEVSIANYGALVQAVRYKGRN-----LVNGFNDFSRYKLKENPFFGATIGRFANRIANG 431
Query: 100 QFTLNGTRYQLINNDGD-NMLHGGPRGFSEVIWK---VKSHEVNSHITFTYNSLEGEQGF 155
QF ++G Y L N+ + LHGG GF + + + +E + + F +G GF
Sbjct: 432 QFEVDGHLYTLCKNENNKTTLHGGNNGFDKQFFLGPIARQYEDYNTLEFILVDKDGNNGF 491
Query: 156 PGDLAVSVTYMFVGENNLVVKMKAKPLE----KATPVNLALHTYWNLGGHS---SGDIFS 208
P DL V Y + N+L ++ K+ E T VNL H+YWNL + G I
Sbjct: 492 PSDLETLVKYT-IKNNSLEIEYKSVIPEYSKLNVTAVNLTNHSYWNLASPNKTIDGTIIK 550
Query: 209 HKLQLF-----------GSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELPDG 257
++ G V ND PT K+ P F+ RE SKF
Sbjct: 551 STTNVYLKVNSETSLPTGDIVEWQNDITKPT-KLDPNISFDNCFIVDRE-ASKF------ 602
Query: 258 YDINYVLDNPNPEHLKKVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKVMGKDGFVYSN 317
LD V V+ SV K+ + T +P Q YT + G D + +
Sbjct: 603 -----CLDTRKYSLKNIVEVIHPSVP-VKLVVSTTEPAFQLYTGD------GNDICEFQS 650
Query: 318 YAGFCLETQGFPDSVNNPNFPSQVV-NPGETY 348
+GFC+ET F +++NN + QV+ GE Y
Sbjct: 651 RSGFCVETGRFINALNNEKWSKQVILRKGEVY 682
>sp|P38893|YH10_YEAST Uncharacterized isomerase YHR210C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YHR210C PE=3 SV=1
Length = 341
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 156/347 (44%), Gaps = 60/347 (17%)
Query: 42 LSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDN-TYFGAIVGRVANRISRAQ 100
L + GAT+L + +++ IVLG+ + Y +D Y GA VGR ANRI +
Sbjct: 21 LQATISELGATLLDLKVNNES-----IVLGYPDIHGYISDGYNYIGATVGRYANRIYKGM 75
Query: 101 FTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTY---------NSLEG 151
F++ +QL N+ N H F + K K+ +V + + Y +L
Sbjct: 76 FSMEDGPHQLTVNNCGNTNHSSISSFH--LKKYKASKVQNPLDDLYIVEFTLLDDRTLPN 133
Query: 152 EQGFPGDLAVSVTYMF-VGENNLVVKMKAKPLE-KATPVNLALHTYWNLGGHSSGDIFSH 209
E FPGDLAV++ Y V + L ++ +AK + +ATP+N+ HTY+NL
Sbjct: 134 E--FPGDLAVNLKYTLNVADMTLDLEYEAKLVSGEATPINMTNHTYFNLNKTMD------ 185
Query: 210 KLQLFGSHVTPVNDR--------LIPTGKITPVTGTPYDFLQPREIGSKFKELPDG--YD 259
K + G+ V +D+ LIPTGKI +D +P + DG YD
Sbjct: 186 KKSISGTEVRLCSDKSLEVSEGALIPTGKIVQRKIATFDSSKPTILQD------DGPIYD 239
Query: 260 INYVLD-NPNPEHLKKVAV--------VSESVSGRKMELWTNKPGVQFYTSNMLGKVMGK 310
+++D N N + V+V S +E+ T +P V FYT + L
Sbjct: 240 YAFIVDENKNLKTTDSVSVNKLVPAFKAYHPASRLSLEVSTTEPTVLFYTGDNLC----- 294
Query: 311 DGFVYSNYAGFCLETQGFPDSVNNPNFPSQV-VNPGETYNHVMVYRF 356
DGF + +GF +E + D++N + V + GE Y YRF
Sbjct: 295 DGF--TPRSGFAVEQGRYVDAINRDGWRDCVLLRRGEVYTSKTRYRF 339
>sp|P53757|YN9A_YEAST Uncharacterized isomerase YNR071C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNR071C PE=1 SV=1
Length = 342
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 39/329 (11%)
Query: 50 GATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTLNGTRYQ 109
GAT++ + NG+ +V G+ +V+DY TD GA VGR ANRI++ F+L+ ++
Sbjct: 29 GATLVDLKV---NGQ--SVVQGYSNVQDYLTDGNMMGATVGRYANRIAKGVFSLDDGPHK 83
Query: 110 LINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTY-------NSLEGEQGFPGDLAVS 162
L N+ N H + +K E S + ++ FPGDL V+
Sbjct: 84 LTVNNCGNTNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLEVT 143
Query: 163 VTYMF-VGENNLVVKMKAKPLE-KATPVNLALHTYWNLGG-HSSGDIFSHKLQLFGSHVT 219
V Y V E L ++ +A+ + ATP+N+ H+Y+NL S I ++++ +
Sbjct: 144 VKYTLNVAEMTLDMEYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSL 203
Query: 220 PVND-RLIPTGKITPVTGTPYDFLQPREIGSKFKELPDGYDINYVLD-NPNPEHLKKVAV 277
V + L+PTGKI +D +P + E +D +++D N + + V+V
Sbjct: 204 EVTEGALLPTGKIIERNIATFDSTKP----TVLHEDTPVFDCTFIIDANKDLKTTDSVSV 259
Query: 278 --------VSESVSGRKMELWTNKPGVQFYT-SNMLGKVMGKDGFVYSNYAGFCLETQGF 328
S K E+ T +P V YT N+ GK + + +GF ++ +
Sbjct: 260 NKLVPVFKAYHPESHIKFEVSTTEPTVHLYTGDNLCGKFVPR--------SGFAVQQGRY 311
Query: 329 PDSVNNPNFPSQV-VNPGETYNHVMVYRF 356
D++N + V + GE Y Y+F
Sbjct: 312 VDAINRDEWRGCVLLKRGEVYTSKTQYKF 340
>sp|Q00053|GALM_LACHE Aldose 1-epimerase (Fragment) OS=Lactobacillus helveticus GN=galM
PE=3 SV=1
Length = 129
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 44 LKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTL 103
+K NYGAT+ ++ D+N ++L +S DY + Y G VGR+A R+ + Q+
Sbjct: 29 VKVLNYGATLEKVLLNDEN-----MILSLNSPADYSQERNYLGGTVGRIAGRVRKGQWRH 83
Query: 104 NGTRYQLINNDGDNMLHGGPRGFSEVIWKVK 134
+QL NDG+N +HGG G +W K
Sbjct: 84 GLETHQLPINDGENHIHGGI-GTDTEVWDFK 113
>sp|P39840|GALM_BACSU Aldose 1-epimerase OS=Bacillus subtilis (strain 168) GN=galM PE=1
SV=2
Length = 325
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 28/248 (11%)
Query: 27 ESCEAVGVYKLKRGDLSLKFT---NYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNT 83
E +G +K G+ L+ +G+ ++S V N +L + ++ + + T
Sbjct: 6 EKITYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQL---LREPETAESFHDTPT 62
Query: 84 YFGAIVGRVANRISRAQFTLNGTRYQLINNDGD--NMLHG--GPRGFSEVIWKVKSHEVN 139
+G + NRIS F+ G Y N+ D N LHG ++ V K V
Sbjct: 63 LYGIPILFPPNRISDGTFSFRGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVI 122
Query: 140 SHITFTYNSLEG-EQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALHTY-WN 197
+ L ++ FP V +TY + EN L + AT +N + W
Sbjct: 123 VETEIDLSELPHVQKQFPHHAVVRMTYT-IKENTL--------FKHATVMNKGKEAFPWG 173
Query: 198 LGGHSSGDIFSHKLQLF---GSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKEL 254
+G H++ IF + LF +++RL+PTGK+ V PY + + K+L
Sbjct: 174 IGYHTTF-IFPAESSLFSLTADQQWELDERLLPTGKLMDV---PYKEALHEGMDLRHKQL 229
Query: 255 PDGYDINY 262
D + +Y
Sbjct: 230 DDVFLSSY 237
>sp|Q8Y213|SYGB_RALSO Glycine--tRNA ligase beta subunit OS=Ralstonia solanacearum (strain
GMI1000) GN=glyS PE=3 SV=1
Length = 697
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 44 LKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKT--DNTYFGAIVGRVANRISRAQF 101
LK Y + AV+ + +L DIV ++V+ + A R+ N + +
Sbjct: 544 LKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAALPQAEALAAANKRITNILKKTDI 603
Query: 102 TLNGTRYQLINNDGDNMLH 120
T+ + QL+ D + LH
Sbjct: 604 TIGSVQPQLLREDAERALH 622
>sp|P16226|IPSG_MELME Double-headed protease inhibitor, submandibular gland OS=Meles
meles PE=1 SV=1
Length = 122
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 278 VSESVSGRKMELWT-NKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQ 326
V + GRK+ N G QF S L V G D YSN FC+ TQ
Sbjct: 5 VGDQAGGRKVNCSKYNAKGSQFACSRHLDPVCGTDHRTYSNECMFCMLTQ 54
>sp|A6T6D9|ATKA_KLEP7 Potassium-transporting ATPase A chain OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=kdpA PE=3 SV=1
Length = 559
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 101 FTLNGTRYQLINNDG-DNMLHGGPRGFSEVIWKVKSHEVNSHITFT--------YNSLEG 151
L GT ++ + G M + GP GFSEV++ V S N+ F +N L
Sbjct: 427 LVLLGTALAMMTDAGRAGMFNPGPHGFSEVLYAVTSAANNNGSAFAGLGAATPFWNLLLA 486
Query: 152 EQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALH 193
G AV + M + + + AK ++ A+P LA H
Sbjct: 487 FCMLVGRFAVIIPVMAIAGS-----LVAKKIQPASPGTLATH 523
>sp|A9MK88|ATKA_SALAR Potassium-transporting ATPase A chain OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=kdpA PE=3
SV=1
Length = 559
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 100 QFTLNGTRYQLINNDGDN-MLHGGPRGFSEVIWKVKSHEVNSHITFT--------YNSLE 150
L G+ ++ + G + ML+ GP GFSEV++ V S N+ F +N L
Sbjct: 426 MLVLLGSALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLL 485
Query: 151 GEQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALH 193
F G V + M + + +V KA+P + T LA H
Sbjct: 486 AFCMFVGRFGVIIPVMAIAGS--LVSKKAQPASQGT---LATH 523
>sp|B5XZE8|ATKA_KLEP3 Potassium-transporting ATPase A chain OS=Klebsiella pneumoniae
(strain 342) GN=kdpA PE=3 SV=1
Length = 559
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 101 FTLNGTRYQLINNDG-DNMLHGGPRGFSEVIWKVKSHEVNSHITFT--------YNSLEG 151
L GT ++ + G M + GP GFSEV++ V S N+ F +N L
Sbjct: 427 LVLLGTALAMMTDAGRAGMFNPGPHGFSEVLYAVTSAANNNGSAFAGLGAATPFWNLLLA 486
Query: 152 EQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALH 193
G AV + M + + + AK ++ A+P LA H
Sbjct: 487 FCMLVGRFAVIIPVMAIAGS-----LVAKKIQPASPGTLATH 523
>sp|Q9LNU4|PSD31_ARATH Probable 26S proteasome non-ATPase regulatory subunit 3a
OS=Arabidopsis thaliana GN=EMB2719 PE=1 SV=3
Length = 488
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 7 VFCYFIVLVLFFTNKKCQATESCEAVGVYKLK 38
++CYFIVL+ KK ++C + + +LK
Sbjct: 119 IYCYFIVLLFLIDQKKYNEAKACSSASIARLK 150
>sp|P40806|PKSJ_BACSU Polyketide synthase PksJ OS=Bacillus subtilis (strain 168) GN=pksJ
PE=1 SV=3
Length = 5043
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 162 SVTYMFVGENNLVVKMKAKPLEKATPVNL---ALHTYWNLGGHSSGDIFSHKLQLFGSHV 218
S+ YM G +V K+ + LE P L A+ W + SSG IFSH+ G
Sbjct: 310 SMRYMLNGGEAMVAKVGRRILELLEPHGLPADAIRPAWGMSETSSGVIFSHEFTRAG--- 366
Query: 219 TPVNDRLIPTGKITP 233
T +D + G P
Sbjct: 367 TSDDDHFVEIGSPIP 381
>sp|P81481|IPSG_MUSLU Double-headed protease inhibitor, submandibular gland OS=Mustela
lutreola PE=1 SV=1
Length = 122
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 278 VSESVSGRKMELWT-NKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQGFPDSVNNPN 336
V + GRK++ + N G +F S V G D YSN FC+ TQ N
Sbjct: 5 VGDQAGGRKVDCFKYNTTGSEFACSRKWQPVCGTDHRTYSNECMFCMLTQ-------NKR 57
Query: 337 FPSQVVN 343
FP +++
Sbjct: 58 FPVRILQ 64
>sp|P54680|FIMB_DICDI Fimbrin OS=Dictyostelium discoideum GN=fimA PE=2 SV=2
Length = 610
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 241 FLQPREIGSKFKELPDGYDINYVLDNPNPEHLKKVAVVSESVSGRKMELWTNKPGVQFYT 300
FL+P++I + F++L + N +P E ++ V ++ E+ + W N GV +
Sbjct: 339 FLKPKDIVTGFQKLNLAFVANLFNTHPALEPVEDVVIIEETREEKTFRNWMNSLGVDPFV 398
Query: 301 SNM 303
+N+
Sbjct: 399 NNL 401
>sp|Q9M880|STAD4_ARATH Acyl-[acyl-carrier-protein] desaturase 4, chloroplastic
OS=Arabidopsis thaliana GN=S-ACP-DES4 PE=1 SV=2
Length = 403
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 206 IFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFL-----------QPREIGSKFKEL 254
I KL++F S + L+ K + P DFL Q +E+ + KE+
Sbjct: 66 ITQEKLEIFKSMENWAQENLLSYLKPVETSWQPQDFLPETKDEDRFYEQVKELRDRTKEI 125
Query: 255 PDGYDINYVLDNPNPEHLKKVAVVSESVSGRKME 288
PD Y + V D E L V ++ G K E
Sbjct: 126 PDDYFVVLVGDMITEEALPTYQTVMNTLDGAKDE 159
>sp|Q6FZK1|PUR5_BARQU Phosphoribosylformylglycinamidine cyclo-ligase OS=Bartonella
quintana (strain Toulouse) GN=purM PE=3 SV=1
Length = 361
Score = 32.0 bits (71), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 27 ESCEAVGVYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDS 74
E+ E G+Y +GD L GAT SA++P K+ DI+LG S
Sbjct: 150 ETAEMPGMYA--KGDYDLAGFAVGATERSALLPSKDLAEGDIILGLSS 195
>sp|Q5XX08|NCAP_EBOSU Nucleoprotein OS=Sudan ebolavirus (strain Uganda-00) GN=NP PE=3
SV=1
Length = 738
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 196 WNLGGHSSGDIFSHKLQLFGSHVTP--VNDRLIPTGKITPVTGTPYDFLQPREIGSKFKE 253
W LGG S D+ HK+ G V V R+IP ++ + G +Q E G F++
Sbjct: 9 WALGGQSEVDLDYHKILTAGLSVQQGIVRQRVIPVYVVSDLEGICQHIIQAFEAGVDFQD 68
Query: 254 LPDGY 258
D +
Sbjct: 69 NADSF 73
>sp|Q9FXM5|G6PI_ARAHG Glucose-6-phosphate isomerase, cytosolic OS=Arabidopsis halleri
subsp. gemmifera GN=PGIC PE=3 SV=2
Length = 560
Score = 31.6 bits (70), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 157 GDLAVSVTYMFV-------GENNLVVKMKAKPLEKATPVNLALHTYWNLG--GHSSGDI- 206
G L +S+ Y F G +++ ++ P EK PV L L + WN+ G+ + I
Sbjct: 283 GVLPLSLQYGFSVVEKFLKGASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAIL 342
Query: 207 -FSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDF 241
+S L+ F H+ V+ + GK + G P F
Sbjct: 343 PYSQALEKFAPHIQQVS--MESNGKGVSIDGLPLPF 376
>sp|P34795|G6PI_ARATH Glucose-6-phosphate isomerase, cytosolic OS=Arabidopsis thaliana
GN=PGIC PE=2 SV=1
Length = 560
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 157 GDLAVSVTYMFV-------GENNLVVKMKAKPLEKATPVNLALHTYWNLG--GHSSGDI- 206
G L +S+ Y F G +++ ++ P EK PV L L + WN+ G+ + I
Sbjct: 283 GVLPLSLQYGFSMVEKFLKGASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAIL 342
Query: 207 -FSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDF 241
+S L+ F H+ V+ + GK + G P F
Sbjct: 343 PYSQALEKFAPHIQQVS--MESNGKGVSIDGLPLPF 376
>sp|Q9FXM4|G6PI_ARALP Glucose-6-phosphate isomerase, cytosolic OS=Arabidopsis lyrata
subsp. petraea GN=PGIC PE=3 SV=1
Length = 560
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 157 GDLAVSVTYMFV-------GENNLVVKMKAKPLEKATPVNLALHTYWNLG--GHSSGDI- 206
G L +S+ Y F G +++ ++ P EK PV L L + WN+ G+ + I
Sbjct: 283 GVLPLSLQYGFSVVEKFLKGASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAIL 342
Query: 207 -FSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDF 241
+S L+ F H+ V+ + GK + G P F
Sbjct: 343 PYSQALEKFAPHIQQVS--MESNGKGVSIDGLPLPF 376
>sp|A8AJB7|ATKA_CITK8 Potassium-transporting ATPase A chain OS=Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=kdpA PE=3 SV=1
Length = 559
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 101 FTLNGTRYQLINNDG-DNMLHGGPRGFSEVIWKVKSHEVNSHITFT--------YNSLEG 151
L GT ++ G ML+ GP GFSEV++ V S N+ F +N L
Sbjct: 427 LVLLGTALAMMTETGRSGMLNPGPHGFSEVLYAVSSAANNNGSAFAGLNANTPFWNCLLA 486
Query: 152 EQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVNLALH 193
F G V + M + + +V K +P A+P L H
Sbjct: 487 FCMFVGRFGVIIPVMAIAGS--LVGKKRQP---ASPGTLPTH 523
>sp|P54243|G6PI_OENME Glucose-6-phosphate isomerase, cytosolic OS=Oenothera mexicana
GN=PGIC PE=3 SV=1
Length = 568
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 157 GDLAVSVTYMFV-------GENNLVVKMKAKPLEKATPVNLALHTYWNLG--GHSSGDI- 206
G L +S+ Y F G +N+ + P EK PV L L + WN+ G+ + I
Sbjct: 282 GVLPLSLQYGFAVVEKFLQGAHNIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAIL 341
Query: 207 -FSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDF 241
+S L+ H+ V+ + GK + G P F
Sbjct: 342 PYSQALEKLAPHIQQVS--MESNGKGVSIDGLPLPF 375
>sp|P29333|G6PI2_CLALE Glucose-6-phosphate isomerase, cytosolic 2A OS=Clarkia lewisii
GN=PGIC2-A PE=3 SV=1
Length = 569
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 157 GDLAVSVTYMFV-------GENNLVVKMKAKPLEKATPVNLALHTYWNLG--GHSSGDI- 206
G L +S+ Y F G +N+ + P EK PV L L + WN+ G+ + I
Sbjct: 282 GVLPLSLQYGFAVVEKFLQGAHNIDQHFSSAPFEKNIPVLLGLLSVWNVSFLGYPARAIL 341
Query: 207 -FSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDF 241
+S L+ H+ V+ + GK + G P F
Sbjct: 342 PYSQALEKLAPHIQQVS--MESNGKGVSIDGLPLPF 375
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,896,563
Number of Sequences: 539616
Number of extensions: 6722012
Number of successful extensions: 14131
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 14033
Number of HSP's gapped (non-prelim): 57
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)