Query 043310
Match_columns 359
No_of_seqs 202 out of 1119
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 05:53:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043310.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043310hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3imh_A Galactose-1-epimerase; 100.0 6.4E-73 2.2E-77 540.3 31.2 308 28-357 14-330 (338)
2 1snz_A Aldose 1-epimerase; mut 100.0 3.3E-72 1.1E-76 539.7 31.6 328 25-358 13-343 (344)
3 1lur_A Aldose 1-epimerase; vit 100.0 6.3E-72 2.2E-76 536.5 28.8 323 30-358 11-337 (339)
4 1nsx_A Galactose mutarotase; e 100.0 1E-70 3.5E-75 529.2 30.8 316 31-359 11-339 (347)
5 1yga_A Hypothetical 37.9 kDa p 100.0 1.5E-66 5.2E-71 500.2 27.7 318 25-358 3-342 (342)
6 1z45_A GAL10 bifunctional prot 100.0 9.4E-65 3.2E-69 530.1 31.9 318 24-357 365-699 (699)
7 3nre_A Aldose 1-epimerase; str 100.0 6.5E-60 2.2E-64 443.8 30.0 281 32-358 2-290 (291)
8 3os7_A Galactose mutarotase-li 100.0 2.1E-59 7.2E-64 450.0 30.4 304 29-357 15-339 (341)
9 3mwx_A Aldose 1-epimerase; str 100.0 5.8E-58 2E-62 437.7 26.7 295 29-357 11-322 (326)
10 3q1n_A Galactose mutarotase re 100.0 1.6E-54 5.5E-59 407.9 29.2 277 34-356 2-293 (294)
11 3dcd_A Galactose mutarotase re 100.0 2.8E-52 9.5E-57 394.7 31.6 276 34-357 2-292 (307)
12 3k25_A SLR1438 protein; struct 100.0 2.4E-46 8.4E-51 351.4 29.5 271 26-358 5-288 (289)
13 2hta_A Putative enzyme related 100.0 2E-43 6.8E-48 334.7 21.9 260 29-357 38-307 (309)
14 2cir_A Hexose-6-phosphate muta 100.0 2.6E-42 8.8E-47 325.4 14.9 262 32-357 7-289 (297)
15 1jov_A HI1317; hypothetical pr 100.0 3.2E-28 1.1E-32 225.9 25.7 247 29-354 18-268 (270)
16 3ty1_A Hypothetical aldose 1-e 99.9 8.3E-21 2.8E-25 184.0 23.7 275 28-357 44-352 (384)
17 3bs6_A Inner membrane protein 92.4 2.5 8.6E-05 38.2 13.6 27 33-59 4-30 (280)
18 3blc_A Inner membrane protein 90.0 4.4 0.00015 37.5 13.0 27 33-59 35-61 (330)
19 3isy_A Bsupi, intracellular pr 35.6 80 0.0027 24.5 5.9 31 157-188 5-36 (120)
20 2kl8_A OR15; structural genomi 33.4 36 0.0012 23.3 3.0 18 162-180 32-49 (85)
21 1k1x_A 4-alpha-glucanotransfer 24.5 2.6E+02 0.0091 28.2 9.1 53 126-182 513-565 (659)
22 1gu3_A Endoglucanase C; carboh 23.7 1.8E+02 0.006 23.2 6.3 43 156-198 42-91 (149)
23 4hhu_A OR280; engineered prote 22.3 77 0.0026 24.5 3.5 18 162-180 33-50 (170)
24 4hhu_A OR280; engineered prote 21.1 77 0.0026 24.5 3.3 18 162-180 114-131 (170)
25 3oba_A Beta-galactosidase; TIM 20.5 7.9E+02 0.027 26.2 13.1 32 34-70 755-786 (1032)
26 1jz7_A Lactase, beta-galactosi 20.5 3.6E+02 0.012 28.8 9.5 32 34-70 746-777 (1023)
No 1
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=100.00 E-value=6.4e-73 Score=540.26 Aligned_cols=308 Identities=27% Similarity=0.493 Sum_probs=280.7
Q ss_pred CCceeEEEEEEeC-CEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCcccceEeeCCCccCCCEEEECCE
Q 043310 28 SCEAVGVYKLKRG-DLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTLNGT 106 (359)
Q Consensus 28 ~~~~~~~~~L~n~-~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G~~l~P~anRi~~g~f~~~G~ 106 (359)
+++.+..|+|+|+ +++|+|+++||+|+||+++ + +||||||++.++|..++.++|++||||||||++|+|+++|+
T Consensus 14 ~g~~v~~~tL~n~~g~~v~i~~~GA~l~sl~~~---~--~dvvlg~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~ 88 (338)
T 3imh_A 14 DNKDLCEITLENDAGMAVKVLNYGATLEKVLLD---G--ENMILSLNSPEDYSKERNFLGGTVGRIAGRVRAGQWKHGNE 88 (338)
T ss_dssp TTEEEEEEEEECSSSEEEEEETBTTEEEEEEET---T--EECBCCCSSGGGGGTSCCCTTCEECSBCSEEGGGEEEETTE
T ss_pred CCeEEEEEEEECCCcEEEEEecCCcEEEEEEEC---C--EEEEecCCChHHhccCCCeEeeEEEeeCCEecCCEEEECCE
Confidence 7889999999998 6999999999999999995 3 79999999999999888999999999999999999999999
Q ss_pred EEEccCCCCCCCCCCCCCCCCccceEEEEe--eeccEEEEEEEcCCCCCCCCeeEEEEEEEEEeCCCeEEEEEEEEeCCC
Q 043310 107 RYQLINNDGDNMLHGGPRGFSEVIWKVKSH--EVNSHITFTYNSLEGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEK 184 (359)
Q Consensus 107 ~y~l~~N~~~~~lHG~~~g~~~~~w~v~~~--~~~~~v~l~~~~~~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~~~ 184 (359)
+|+|++|+++|+|||++ ||+++.|+++.. .++++|+|++.++++++||||+++++|+|+|+++++|+|+|+++. ++
T Consensus 89 ~y~L~~N~g~n~LHGg~-g~~~~~W~v~~~~~~~~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~~-d~ 166 (338)
T 3imh_A 89 IHQLPLNDGDNHIHGGI-GTDMHVWDFRPSCDSEHARVDLTLFDPDGNNDYPGNLKLHARYELDNENNLHYLLEAVS-DK 166 (338)
T ss_dssp EEECCCCBTTBEETTSS-CGGGSBCEEEEEECSSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEEE-SS
T ss_pred EEECCCCCCCcCCCCCC-CcCCceEEEEeeeecCCCEEEEEEECCccccCCCeEEEEEEEEEEecCCeEEEEEEEec-CC
Confidence 99999999999999999 999999999532 135789999999888899999999999999996689999999998 99
Q ss_pred ceeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccC------CCCc
Q 043310 185 ATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKEL------PDGY 258 (359)
Q Consensus 185 ~~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~------~~g~ 258 (359)
+||||+|+||||||++ ++.+|+|+|+|++++++|+++||||++.+|++++|||+.+++|++.+.+. ..||
T Consensus 167 ~tp~nlg~HpYFnL~g----~i~~~~L~i~a~~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~q~~~~~g~ 242 (338)
T 3imh_A 167 LTIFNPVNHTYFNLGE----RAEDLNLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGL 242 (338)
T ss_dssp SEECBCEECCEECTTS----CGGGCEEEECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHHTSC
T ss_pred CeEEEEeeCCEEeCCC----CcCCeEEEEEcCcEEEeCCccCCcCceecCCCCcccCCCCeEcchhhhccchhhcccCCC
Confidence 9999999999999986 68999999999999999999999999999999999999999999876432 1589
Q ss_pred ceeeEeCCCCCCCcceEEEEEeCCCCcEEEEEecCCEEEEEcCCCCCccCCCCCccccCceEEEEccCCCCCCCCCCCCC
Q 043310 259 DINYVLDNPNPEHLKKVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQGFPDSVNNPNFP 338 (359)
Q Consensus 259 D~~f~l~~~~~~~~~~~~~l~~~~~g~~l~v~t~~p~l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~~~pda~n~~~~~ 338 (359)
||||++++. .++|+|.+ +|++|+|++++|++||||+++++.. + .|..|.++.+||||||++| +|+++|+
T Consensus 243 Dh~f~l~~~-----~~~a~l~~--sg~~l~v~t~~p~~q~YTgn~l~~~-g-~g~~~~~~~g~clE~q~~P--~n~~~f~ 311 (338)
T 3imh_A 243 DHPFILNGN-----NPAALLSS--NKHRLIVKTNAPALVLYAGNHFNHT-G-IVNNIGQYDGITFEAQCPP--AEGNDLG 311 (338)
T ss_dssp EEEEEECSC-----SCSEEEEC--SSEEEEEEESSSEEEEECCTTCCSB-T-TBTTCCTTSCEECEEESCC--CSSSCCG
T ss_pred CCceeecCC-----ceEEEEEC--CCeEEEEEeCCCEEEEeCCCCcCCC-C-CCcccCccCEEEEEccCCC--CCCCCCC
Confidence 999999531 34678864 8999999999999999999988654 4 5778888999999999988 8999999
Q ss_pred ceEECCCCEEEEEEEEEEE
Q 043310 339 SQVVNPGETYNHVMVYRFT 357 (359)
Q Consensus 339 ~~~L~pGe~~~~~~~y~f~ 357 (359)
.++|+|||+|+++++|+|.
T Consensus 312 ~~vL~pGe~y~~~t~y~f~ 330 (338)
T 3imh_A 312 QITLLPFEKFKRTVDWKFE 330 (338)
T ss_dssp GGEECTTCCEEEEEEEEEE
T ss_pred CeEECCCCEEEEEEEEEEC
Confidence 9999999999999999996
No 2
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=3.3e-72 Score=539.73 Aligned_cols=328 Identities=40% Similarity=0.786 Sum_probs=295.6
Q ss_pred cccCC-ceeEEEEEEeCCEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCcccceEeeCCCccCCCEEEE
Q 043310 25 ATESC-EAVGVYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTL 103 (359)
Q Consensus 25 ~~~~~-~~~~~~~L~n~~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G~~l~P~anRi~~g~f~~ 103 (359)
.+.+| +.+..|+|+|++++|+|+++||+|+||++++++|+.+|||||+++.++|..++.++|++|+||||||++|+|++
T Consensus 13 ~~~~g~~~~~~~~L~n~~~~~~i~~~GA~l~s~~~~~~~G~~~~vv~g~~~~~~y~~~~~~~G~~l~p~~nRi~~g~f~~ 92 (344)
T 1snz_A 13 ELPSGGGTVEKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKV 92 (344)
T ss_dssp EETTTTEEEEEEEEECSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTTCEECSBCSEEGGGEEEE
T ss_pred eccCCCcEEEEEEEEcCCEEEEEecCCcEEEEEEecCCCCCEeeEEECCCChHHHhhCCCceeeEecCcCCcccCCEEEE
Confidence 34567 88999999999999999999999999999988787779999999999999888999999999999999999999
Q ss_pred CCEEEEccCCCCCCCCCCCCCCCCccceEEEEeeeccEEEEEEEcCCCCCCCCeeEEEEEEEEEeCCCeEEEEEEEEeCC
Q 043310 104 NGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPLE 183 (359)
Q Consensus 104 ~G~~y~l~~N~~~~~lHG~~~g~~~~~w~v~~~~~~~~v~l~~~~~~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~~ 183 (359)
+|++|+|++|+++|++|||++||+++.|++++. + ++|+|++.+++++++|||+++++|+|+|++ ++|+|+|+++| +
T Consensus 93 ~G~~y~L~~N~~~~~lHG~~~g~~~~~W~v~~~-~-~~v~l~l~~~~~~~gyP~~~~~~vty~L~~-~~L~i~~~a~~-d 168 (344)
T 1snz_A 93 DGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVL-S-NGVQFSRISPDGEEGYPGELKVWVTYTLDG-GELIVNYRAQA-S 168 (344)
T ss_dssp TTEEEECCCTBTTBEETTSSSCGGGSBCEEEEE-T-TEEEEEEEECTTGGGCCSCEEEEEEEEEET-TEEEEEEEEEE-S
T ss_pred CCEEEECCCCCCCcccCCCccccccceeeEEEe-C-CEEEEEEECCCcCCCCCEEEEEEEEEEEcC-CEEEEEEEEEe-C
Confidence 999999999999999999999999999999886 3 789999999888899999999999999985 59999999999 9
Q ss_pred CceeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccC-CCCcceee
Q 043310 184 KATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKEL-PDGYDINY 262 (359)
Q Consensus 184 ~~~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~-~~g~D~~f 262 (359)
++|||++|+||||||++..++++.+|+|++++++++++|+++||||++.+++++++||+.+++|++.+... ..|+||+|
T Consensus 169 ~~~p~~~~~H~YFnl~~~~~~~i~~~~L~i~a~~~~~~d~~~iPtg~~~~v~~t~~df~~~~~l~~~~~~~~~~g~D~~f 248 (344)
T 1snz_A 169 QATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNF 248 (344)
T ss_dssp SCEECBCEECCCBCTTCTTCSCCTTCEEEECEEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHHTTCCCCEEEE
T ss_pred CceEEeccccceEecCCCCCCcccCEEEEEECCeEEEeCCCCcccCceecCCCCcccccCCcCcChhhcccccCCCCeEE
Confidence 99999999999999998666689999999999999999999999999889999999999999998765221 24699999
Q ss_pred EeCCCCCCCcceEEEEEeCCCCcEEEEEecCCEEEEEcCCCCCcc-CCCCCccccCceEEEEccCCCCCCCCCCCCCceE
Q 043310 263 VLDNPNPEHLKKVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKV-MGKDGFVYSNYAGFCLETQGFPDSVNNPNFPSQV 341 (359)
Q Consensus 263 ~l~~~~~~~~~~~~~l~~~~~g~~l~v~t~~p~l~vyt~~~~~~~-~~~~~~~~~~~~~iciEP~~~pda~n~~~~~~~~ 341 (359)
+++.. ......|+|.++.+++.|+|++++|++||||+++++.. .++.+..|.++++||||||++|||+|+++|+.++
T Consensus 249 ~~~~~--~~~~~~a~l~~~~sg~~l~v~t~~p~~~vyt~~~~~~~~~~~~~~~y~~~~~vclEp~~~pda~n~~~~~~~~ 326 (344)
T 1snz_A 249 CLKGS--KEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVL 326 (344)
T ss_dssp EECCC--SSCEEEEEEEETTTTEEEEEEESSSEEEEECCTTCEEEEECGGGCEEETTSCBEEEEESCTTGGGCTTSCCCE
T ss_pred EccCC--CCCceEEEEEeCCCCcEEEEEeCCCeEEEECCCCCCccccCCCCcccCCCCEEEEeCcCCCCcccCCCCCCeE
Confidence 98642 11245799999999999999999999999999877542 3455666777899999999999999999999999
Q ss_pred ECCCCEEEEEEEEEEEe
Q 043310 342 VNPGETYNHVMVYRFTA 358 (359)
Q Consensus 342 L~pGe~~~~~~~y~f~~ 358 (359)
|+|||+|+.+++|+|++
T Consensus 327 L~pGe~~~~~~~~~f~~ 343 (344)
T 1snz_A 327 LRPGEEYDHTTWFKFSV 343 (344)
T ss_dssp ECTTSCEEEEEEEEEEE
T ss_pred ECCCCEEEEEEEEEEEe
Confidence 99999999999999985
No 3
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=100.00 E-value=6.3e-72 Score=536.47 Aligned_cols=323 Identities=30% Similarity=0.538 Sum_probs=288.8
Q ss_pred ceeEEEEEEeCCEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCcccceEeeCCCccCCCEEEECCEEEE
Q 043310 30 EAVGVYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTLNGTRYQ 109 (359)
Q Consensus 30 ~~~~~~~L~n~~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G~~l~P~anRi~~g~f~~~G~~y~ 109 (359)
..+..|+|++++++|+|+++||+|+||+++|++|+.+||||++++.++|..++.++|++|+||||||++|+|+++|++|+
T Consensus 11 ~~~~~~~L~~~~~~~~i~~~GA~l~sl~~~d~~G~~~dvvl~~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~~y~ 90 (339)
T 1lur_A 11 ASGFIEIANKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQYT 90 (339)
T ss_dssp CCCCEEEECSSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCTTCEECSBCSEEGGGEEEETTEEEE
T ss_pred ceeEEEEEeCCCEEEEEecCCcEEEEEEEECCCCCEeEEEEcCCChHHhccCCCccccEecCcCCeecCCEEEECCEEEE
Confidence 45778999767899999999999999999988787789999999988898888899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCccceEEEEeeeccEEEEEEEcCCCCCCCCeeEEEEEEEEEeCCCeEEEEEEEEeCCCceeEe
Q 043310 110 LINNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKATPVN 189 (359)
Q Consensus 110 l~~N~~~~~lHG~~~g~~~~~w~v~~~~~~~~v~l~~~~~~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~~~~~p~~ 189 (359)
|++|+++|++|||++||+++.|++++.+ +++|+|++.++++++||||+++++|+|+|+++++|+|+|+++. +++|||+
T Consensus 91 L~~N~~~n~lHGg~~g~~~~~W~v~~~~-~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~~-d~~tp~~ 168 (339)
T 1lur_A 91 MTPNNGPHYLHGGPNGLGYRKWEVVRHA-PESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIEHHATC-DTPGLLA 168 (339)
T ss_dssp CCCSBTTBEETTCTTSGGGSBCEEEEEE-TTEEEEEEEEEHHHHSSSSEEEEEEEEEECTTSEEEEEEEEEC-SSCEECB
T ss_pred CCCCCCCcccCCCCcccccceeeEEEcc-CCEEEEEEECCCcCCCCCeEEEEEEEEEECCCCeEEEEEEEeC-CCCeEEe
Confidence 9999999999999999999999998874 7899999999877889999999999999985689999999977 9999999
Q ss_pred ecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccC--CCCcceeeEeCCC
Q 043310 190 LALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKEL--PDGYDINYVLDNP 267 (359)
Q Consensus 190 lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~--~~g~D~~f~l~~~ 267 (359)
+|+||||||++. +++.+|+|+|++++++++|+++||||++.++++++|||+.+++|++.+... ..+|||+|++++.
T Consensus 169 lg~HpYFnl~~~--~~i~~~~L~i~a~~~~~~d~~~iPtg~~~~v~~t~~Df~~~~~l~~~~~~~~~~~~~D~~f~~~~~ 246 (339)
T 1lur_A 169 LTNHAYWNLDGS--DTVAEHFLEMEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEELLDLDNDLVITKK 246 (339)
T ss_dssp CEECCEECSSCC--SCSTTCEEEECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSSCCCCCEEEEEECCC
T ss_pred eeccceEECCCC--CcccCEEEEEECCEEEEeCCCCccCCCEEccCCCcccccCceecCchhcccccCCCCccEEEeCCC
Confidence 999999999974 378999999999999999999999999999999999999999998865321 1379999998642
Q ss_pred CCCC-cc-eEEEEEeCCCCcEEEEEecCCEEEEEcCCCCCccCCCCCccccCceEEEEccCCCCCCCCCCCCCceEECCC
Q 043310 268 NPEH-LK-KVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQGFPDSVNNPNFPSQVVNPG 345 (359)
Q Consensus 268 ~~~~-~~-~~~~l~~~~~g~~l~v~t~~p~l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~~~pda~n~~~~~~~~L~pG 345 (359)
+++ .+ ..|+|.++.+|+.|+|++++|++||||++++ ...+++|+.|.++.+||||||.+|||+|+++|++++|+||
T Consensus 247 -~~~~~~~~~a~l~~~~sg~~l~v~t~~p~~~vyt~~~~-~~~g~~g~~y~~~~~vclEp~~~pDa~n~~~~~~~~L~pG 324 (339)
T 1lur_A 247 -TPPSTPSTYLRFWSEKSGIELSITTSYPVIHLYASKFL-DCKGKKGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPG 324 (339)
T ss_dssp -CC----CCCEEEECTTTCEEEEEEESSSEEEEECCTTC-CEECGGGCEECTTCCEEEEEESCTTGGGCTTSCCCEECTT
T ss_pred -CCCcccceEEEEEECCCCcEEEEEeCCCEEEEECCCCc-cccCCCCcccCCCCEEEEeccCCCCccCCCCCCCeEECCC
Confidence 111 12 4689999999999999999999999999876 4345567778788999999999999999999999999999
Q ss_pred CEEEEEEEEEEEe
Q 043310 346 ETYNHVMVYRFTA 358 (359)
Q Consensus 346 e~~~~~~~y~f~~ 358 (359)
|+|+.+++|+|++
T Consensus 325 e~~~~~~~~~f~~ 337 (339)
T 1lur_A 325 DHYCQEIVYTFSH 337 (339)
T ss_dssp CCEEEEEEEEEEE
T ss_pred CEEEEEEEEEEEE
Confidence 9999999999985
No 4
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=100.00 E-value=1e-70 Score=529.22 Aligned_cols=316 Identities=28% Similarity=0.491 Sum_probs=283.2
Q ss_pred eeEEEEEEeC-CEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCcccceEeeCCCccCCCEEEECCEEEE
Q 043310 31 AVGVYKLKRG-DLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTLNGTRYQ 109 (359)
Q Consensus 31 ~~~~~~L~n~-~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G~~l~P~anRi~~g~f~~~G~~y~ 109 (359)
.+..|+|+|+ +++|+|+++||+|+||+ + +| ++|||+|++.+.|..++.++|++||||||||++|+|+++|++|+
T Consensus 11 ~~~~~tL~n~~~~~v~i~~~GA~l~sl~-~--~G--~~vvlg~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~~y~ 85 (347)
T 1nsx_A 11 GSDLISLTNKAGVTISFTNLGARIVDWQ-K--DG--KHLILGFDSAKEYLEKDAYPGATVGPTAGRIKDGLVKISGKDYI 85 (347)
T ss_dssp TEEEEEEECTTSCEEEEETBTTEEEEEE-E--TT--EESBCCCSSHHHHHHTCSCTTCEECSBCSEEGGGEEEETTEEEE
T ss_pred eeEEEEEECCCceEEEEEccCcEEEEEE-E--CC--eEEEEeCCCHHHHhhCCCeEeeEEcccCCcccCCEEEECCEEEE
Confidence 6889999997 79999999999999998 3 57 56999999999998888899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCccceEEEEeeecc---EEEEEEEcCCCCCCCCeeEEEEEEEEEeCCCeEEEEEEEEeCCCce
Q 043310 110 LINNDGDNMLHGGPRGFSEVIWKVKSHEVNS---HITFTYNSLEGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKAT 186 (359)
Q Consensus 110 l~~N~~~~~lHG~~~g~~~~~w~v~~~~~~~---~v~l~~~~~~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~~~~~ 186 (359)
|++|+++|+||||+.||+++.|++++.+ ++ +|+|++.++++++||||+++++|+|+|+++++|+|+|+++. +++|
T Consensus 86 L~~N~~~n~lHGg~~g~~~~~W~v~~~~-~~~~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~~-d~~t 163 (347)
T 1nsx_A 86 LNQNEGPQTLHGGEESIHTKLWTYEVTD-LGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDT 163 (347)
T ss_dssp CCCCBTTBEETTSTTCGGGSBCEEEEEE-CSSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEEE-SSCE
T ss_pred ccCCCCCcccCCCCcccccceEEEEEcc-CCcceEEEEEEECCCccCCCCeEEEEEEEEEECCCCeEEEEEEEEc-CCCe
Confidence 9999999999999999999999998864 66 89999999988899999999999999986689999999998 9999
Q ss_pred eEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCC-CCCCccccCCCCCcCCCCceeeccccccCC------CCcc
Q 043310 187 PVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRL-IPTGKITPVTGTPYDFLQPREIGSKFKELP------DGYD 259 (359)
Q Consensus 187 p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~-iPtG~~~~v~~t~~df~~~~~l~~~~~~~~------~g~D 259 (359)
|||+|+||||||++..++++.+|+|+|++++++++|+++ ||||++.++++++|||+.+++|++.++... .+||
T Consensus 164 p~nlg~HpYFnl~g~~~~~i~~~~L~i~a~~~~~~d~~~~iPtG~~~~v~gt~~df~~~~~l~~~~~~~~~~~~~~~g~D 243 (347)
T 1nsx_A 164 VFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGID 243 (347)
T ss_dssp ECBCEECCEECTTSSTTSCGGGSEEEECEEEECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHHCCCHHHHHHTSCE
T ss_pred EEeeeccceEecCCCCCCceeceEEEEECCeEEEECCCCcCcCCCeEecCCCcccccCCcccchhhccchhhhcccCCCC
Confidence 999999999999986566799999999999999999999 999999999999999999999988753211 3799
Q ss_pred eeeEeCCCCCCCcceEEEEEeCCCCcEEEEEecCCEEEEEcCCCCCccCC--CCCccccCceEEEEccCCCCCCCCCCCC
Q 043310 260 INYVLDNPNPEHLKKVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKVMG--KDGFVYSNYAGFCLETQGFPDSVNNPNF 337 (359)
Q Consensus 260 ~~f~l~~~~~~~~~~~~~l~~~~~g~~l~v~t~~p~l~vyt~~~~~~~~~--~~~~~~~~~~~iciEP~~~pda~n~~~~ 337 (359)
|+|++++. ...+..|+|.+ +|+.|+|++++|++||||+++++. + +.+++|.++.+||||||.+|||+|+++|
T Consensus 244 ~~f~l~~~--~~~~~~a~l~~--sg~~l~v~t~~p~lqvyt~~~~~~--g~~~~g~~~~~~~~vclEpq~~pDa~n~~~~ 317 (347)
T 1nsx_A 244 HPFLLDQL--GLDKEQARLTL--DDTSISVFTDQPSIVIFTANFGDL--GTLYHEKKQVHHGGITFECQVSPGSEQIPEL 317 (347)
T ss_dssp EEEEESSC--BTTSCCEEEEE--TTEEEEEEESSSEEEEECCCCTTC--CCEETTEECCTTCCEECEEESCTTTTTCGGG
T ss_pred EEEEecCC--CCceEEEEEEe--CCCEEEEEeCCCEEEEECCCCCcc--ccccCCcccCCcCEEEEeccCCCCccCCCCC
Confidence 99999642 11134688887 899999999999999999987754 3 4567788889999999999999999989
Q ss_pred CceEECCCCEEEEEEEEEEEeC
Q 043310 338 PSQVVNPGETYNHVMVYRFTAD 359 (359)
Q Consensus 338 ~~~~L~pGe~~~~~~~y~f~~~ 359 (359)
++++|+|||+|+.+++|+|++.
T Consensus 318 ~~~~L~pGe~~~~~~~~~f~~~ 339 (347)
T 1nsx_A 318 GDISLKAGEKYQATTIYSLHTK 339 (347)
T ss_dssp CCCEECTTCEEEEEEEEEEEEC
T ss_pred CCeEECCCCEEEEEEEEEEEec
Confidence 9999999999999999999863
No 5
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-66 Score=500.22 Aligned_cols=318 Identities=25% Similarity=0.419 Sum_probs=276.2
Q ss_pred cccCCceeEEEEEEeC-CEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCcccceEeeCCCccCCCEEEE
Q 043310 25 ATESCEAVGVYKLKRG-DLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTL 103 (359)
Q Consensus 25 ~~~~~~~~~~~~L~n~-~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G~~l~P~anRi~~g~f~~ 103 (359)
..|+++.+..|+|+|+ +++|+|+++||+|+||+++ | +|+||++++.+.|..++.++|++|+||+|||++|+|++
T Consensus 3 ~~~~~~~~~~~~l~n~~~~~~~i~~~GA~l~s~~~~---g--~~vl~~~~~~~~y~~~~~~~G~~l~p~~nRi~~g~f~~ 77 (342)
T 1yga_A 3 NSNGDNKYGVITIGDEKKFQATIAPLGATLVDLKVN---G--QSVVQGYSNVQDYLTDGNMMGATVGRYANRIAKGVFSL 77 (342)
T ss_dssp ----CCTTCCEEEEETTTEEEEEETBTTEEEEEEET---T--EECBCCCSSGGGGTTCSSCTTCEECSBCSEEGGGEEEE
T ss_pred cCCCCceEEEEEEECCCCEEEEEECCCCEEEEEEEC---C--eeEEecCCChHHhccCCCeEccEECCCCCceeCCEEEE
Confidence 3578889999999996 7999999999999999983 5 79999999999998888899999999999999999999
Q ss_pred CCEEEEccCCCCCCCCCCCCCCCCccceEEEEee----eccEEEEEEEcCCCCCC---CCeeEEEEEEEEEeC-CCeEEE
Q 043310 104 NGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHE----VNSHITFTYNSLEGEQG---FPGDLAVSVTYMFVG-ENNLVV 175 (359)
Q Consensus 104 ~G~~y~l~~N~~~~~lHG~~~g~~~~~w~v~~~~----~~~~v~l~~~~~~~~~g---yP~~~~~~vty~L~~-~~~L~i 175 (359)
+|++|+|++|+++|++|||++||+++.|++++.. ++++|+|++.+++++++ |||+|+++|+|+|++ +++|+|
T Consensus 78 ~G~~y~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~~~~~~~~v~l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~i 157 (342)
T 1yga_A 78 DDGPHKLTVNNCGNTNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDM 157 (342)
T ss_dssp TTEEEECCCCBTTBEETTGGGCGGGSBCEECCCEEEETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEE
T ss_pred CCEEEEcCCCCCCcccCCCccccCcceeeeEEeeccCCCCCEEEEEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEEE
Confidence 9999999999999999999999999999997541 25689999999877778 999999999999983 489999
Q ss_pred EEEEEeC-CCceeEeecccceeecCCCC-CCCeeceEEEEECceEEeeCCCC-CCCCccccCCCCCcCCCCceeeccccc
Q 043310 176 KMKAKPL-EKATPVNLALHTYWNLGGHS-SGDIFSHKLQLFGSHVTPVNDRL-IPTGKITPVTGTPYDFLQPREIGSKFK 252 (359)
Q Consensus 176 ~~~~~n~-~~~~p~~lg~HpYFnl~~~~-~~~~~~~~L~i~a~~~~~~d~~~-iPtG~~~~v~~t~~df~~~~~l~~~~~ 252 (359)
+|+++|+ +++|||++|+||||||++.. ++++.+|+|++++++++++|+++ ||||++.+++++++||+.+++|++.+
T Consensus 158 ~~~~~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~l~a~~~~~~d~~~~iPtg~~~~v~~~~~df~~~~~l~~~~- 236 (342)
T 1yga_A 158 EYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDT- 236 (342)
T ss_dssp EEEEEEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEEESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSSC-
T ss_pred EEEEEeCCCCceEEeeeccceEEcCCCCCCCcccceEEEEeCCeEEEECCCCCCcCCCeEecCCCcccccCCeecCccc-
Confidence 9999988 99999999999999998743 34799999999999999999888 99999889999999999999998763
Q ss_pred cCCCCcceeeEeCCCC----CCC-----cceEEEEEeCCCCcEEEEEecCCEEEEEcCCCCCccCCCCCccccCceEEEE
Q 043310 253 ELPDGYDINYVLDNPN----PEH-----LKKVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCL 323 (359)
Q Consensus 253 ~~~~g~D~~f~l~~~~----~~~-----~~~~~~l~~~~~g~~l~v~t~~p~l~vyt~~~~~~~~~~~~~~~~~~~~ici 323 (359)
.++||+|++.... .++ ....|+|.++.+++.|+|++++|++|||||+.+. ..|.++.+|||
T Consensus 237 ---~~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~g~~l~v~~~~p~~~vyt~~~~~-------~~y~~~~~vcl 306 (342)
T 1yga_A 237 ---PVFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTTEPTVHLYTGDNLC-------GKFVPRSGFAV 306 (342)
T ss_dssp ---CCCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEEEEESSSEEEEECCTTCC-------TTSCTTSCBEE
T ss_pred ---CCCCcEEEeCCCccccccccccccccceEEEEEeCCCCeEEEEEeCCCEEEEECCCCcc-------ccCCCCCEEEE
Confidence 1499999985420 000 1257899999999999999999999999997541 23445689999
Q ss_pred ccCCCCCCCCCCCCC-ceEECCCCEEEEEEEEEEEe
Q 043310 324 ETQGFPDSVNNPNFP-SQVVNPGETYNHVMVYRFTA 358 (359)
Q Consensus 324 EP~~~pda~n~~~~~-~~~L~pGe~~~~~~~y~f~~ 358 (359)
|||++|||+|+++|+ +++|+|||+|+.+++|+|++
T Consensus 307 Ep~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~f~~ 342 (342)
T 1yga_A 307 QQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYKFDI 342 (342)
T ss_dssp EEESCSSGGGCHHHHGGGEEETTCCEEEEEEEEEEC
T ss_pred ECCCCCCcccCCCCCCCeEECCCCEEEEEEEEEEEC
Confidence 999999999998764 48999999999999999974
No 6
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=9.4e-65 Score=530.08 Aligned_cols=318 Identities=29% Similarity=0.505 Sum_probs=281.8
Q ss_pred ccccCCceeEEEEEEeC-CEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCcccccc-CCCcccceEeeCCCccCCCEE
Q 043310 24 QATESCEAVGVYKLKRG-DLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKT-DNTYFGAIVGRVANRISRAQF 101 (359)
Q Consensus 24 ~~~~~~~~~~~~~L~n~-~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~-~~~~~G~~l~P~anRi~~g~f 101 (359)
+++..+..+..|+|+|+ +++|+|+++||+|+||.+ +| +|+||+|++.+.|.. ++.++|++||||||||++|+|
T Consensus 365 ~~~~~~~~~~~~~l~n~~~~~~~i~~~Ga~l~s~~~---~g--~~~v~~~~~~~~y~~~~~~~~g~~l~~~~nRi~~g~f 439 (699)
T 1z45_A 365 SAEDMRYDARFVTIGAGTRFQATFANLGASIVDLKV---NG--QSVVLGYENEEGYLNPDSAYIGATIGRYANRISKGKF 439 (699)
T ss_dssp SSSTTCTTSEEEEESTTSSEEEEEESBTTCEEEEEE---TT--EECBCCCSSHHHHTCTTCCCTTCEECSBCSEEGGGEE
T ss_pred CCCCCCcceEEEEEECCCceEEEEEccCeEEEEEee---cC--ceEEECCCCHHHHhhcCCCccccccCcccCeecCcEE
Confidence 34667888999999998 899999999999999998 36 699999999999986 577899999999999999999
Q ss_pred EECCEEEEccCCCCCCCCCCCCCCCCccceEEE--Eeeecc--EEEEEEEcCCCCCCCCeeEEEEEEEEEe-CCCeEEEE
Q 043310 102 TLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVK--SHEVNS--HITFTYNSLEGEQGFPGDLAVSVTYMFV-GENNLVVK 176 (359)
Q Consensus 102 ~~~G~~y~l~~N~~~~~lHG~~~g~~~~~w~v~--~~~~~~--~v~l~~~~~~~~~gyP~~~~~~vty~L~-~~~~L~i~ 176 (359)
+++|++|+|++|+++|+||||++||+++.|+++ +..+++ +|+|++.++++++||||+++++|+|+|+ ++++|+|+
T Consensus 440 ~~~G~~y~l~~n~~~~~lHG~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~gyP~~~~~~v~y~L~~~~~~L~i~ 519 (699)
T 1z45_A 440 SLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQNPSKDVFTAEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEIV 519 (699)
T ss_dssp EETTEEEECCCCBTTBEETTGGGCGGGSBCEEEEEEEEETTEEEEEEEEEECGGGSSSSSEEEEEEEEEEETTTTEEEEE
T ss_pred EECCEEEEccCCCCCcccCCCccccceeecceeeeccCCCCcceEEEEEECCCcCCCCCceEEEEEEEEEecCCCEEEEE
Confidence 999999999999999999999999999999984 332245 8999999988889999999999999998 46899999
Q ss_pred EEEEeC-CCceeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccCC
Q 043310 177 MKAKPL-EKATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELP 255 (359)
Q Consensus 177 ~~~~n~-~~~~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~~ 255 (359)
|+++|. +++||||+|+||||||++..++++.+|+|++++++++++|+++||||++.++++++|||+.++.|+...
T Consensus 520 ~~~~n~~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~~~a~~~~~~d~~~iptg~~~~v~~t~~df~~~~~l~~~~---- 595 (699)
T 1z45_A 520 YKGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKN---- 595 (699)
T ss_dssp EEEEEEESSEEECBCEECCEECTTTTSCSSSTTEEEEESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSC----
T ss_pred EEEEecCCCCceecccccceEeecCCCCCCccccEEEEecCeEEecCCCCCCCCCcccCcCCCcccCCcccccccC----
Confidence 999998 899999999999999997656689999999999999999999999999999999999999999988753
Q ss_pred CCcceeeEeCCCC-------C-CCcceEEEEEeCCCCcEEEEEecCCEEEEEcCCCCCccCCCCCccccCceEEEEccCC
Q 043310 256 DGYDINYVLDNPN-------P-EHLKKVAVVSESVSGRKMELWTNKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQG 327 (359)
Q Consensus 256 ~g~D~~f~l~~~~-------~-~~~~~~~~l~~~~~g~~l~v~t~~p~l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~~ 327 (359)
.+|||+|+++... . ....+.|+|.++.+|+.|+|++++|++||||+++++. + |.+++|||||||+
T Consensus 596 ~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~~~p~~~~yt~~~~~~-----~--~~~~~~~clEp~~ 668 (699)
T 1z45_A 596 PQFDCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLSTEPTYQFYTGDFLSA-----G--YEARQGFAIEPGR 668 (699)
T ss_dssp CCCEEEEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEESSSEEEEECCTTCCT-----T--CCTTSCEEEEEES
T ss_pred CCCCcceEccCccccccccccccccceeEEEEcCCCCCEEEEEECCCEEEEEeCCCCCC-----C--CCCCCEEEEecCC
Confidence 4699999986421 0 0113579999999999999999999999999986531 2 5567899999999
Q ss_pred CCCCCCCCCC-CceEECCCCEEEEEEEEEEE
Q 043310 328 FPDSVNNPNF-PSQVVNPGETYNHVMVYRFT 357 (359)
Q Consensus 328 ~pda~n~~~~-~~~~L~pGe~~~~~~~y~f~ 357 (359)
+|||+|+++| ++++|+|||+|+++++|+|+
T Consensus 669 ~pda~n~~~~~~~~~L~pge~~~~~~~~~f~ 699 (699)
T 1z45_A 669 YIDAINQENWKDCVTLKNGETYGSKIVYRFS 699 (699)
T ss_dssp CSSGGGCTTTGGGGEEETTCEEEEEEEEEEC
T ss_pred CCCccCcccCCCCcEECCCCEEEEEEEEEEC
Confidence 9999999988 57899999999999999994
No 7
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=100.00 E-value=6.5e-60 Score=443.84 Aligned_cols=281 Identities=20% Similarity=0.246 Sum_probs=245.7
Q ss_pred eEEEEEEeCCEEEEEecc-CcEEEEEEeeCCCCceeeEEecCCCccccccCCCcccceEeeCCCccCCCEEEECCEEEEc
Q 043310 32 VGVYKLKRGDLSLKFTNY-GATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTLNGTRYQL 110 (359)
Q Consensus 32 ~~~~~L~n~~~~v~i~~~-Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G~~l~P~anRi~~g~f~~~G~~y~l 110 (359)
++.|+|+|++++|+|.++ ||+|+|| . +| +|+||+++ ++ .....+.|++|+||+|||++|+|+++|++|+|
T Consensus 2 ~~~~~l~n~~~~~~i~~~~Ga~l~s~-~---~g--~~vl~~~~--~~-~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l 72 (291)
T 3nre_A 2 MTIYTLSHGSLKLDVSDQGGVIEGFW-R---DT--TPLLRPGK--KS-GVATDASCFPLVPFANRVSGNRFVWQGREYQL 72 (291)
T ss_dssp CCEEEEEETTEEEEEETBTTEEEEEE-E---TT--EESSCCCC--CS-SCGGGSSEEEEBSCCSBCGGGEEEETTEEEEC
T ss_pred ccEEEEcCCCEEEEEEcccCceEEEE-e---CC--CEEEECCC--cc-cCccccCCcEEEeeCCEecCCEEEECCEEEEC
Confidence 568999999999999985 9999999 3 47 79999887 22 22233567999999999999999999999999
Q ss_pred cCCCC--CCCCCCCCCCCCccceEEEEeeeccEEEEEEEcCCCCCCCCeeEEEEEEEEEeCCCeEEEEEEEEeC-CCcee
Q 043310 111 INNDG--DNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPL-EKATP 187 (359)
Q Consensus 111 ~~N~~--~~~lHG~~~g~~~~~w~v~~~~~~~~v~l~~~~~~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~-~~~~p 187 (359)
++|++ +|++||+++ ++.|++++.. +++|+|++.++ + |||+++++++|+|+ +++|+|+|+++|+ +++||
T Consensus 73 ~~N~~~~~~~~HG~~~---~~~W~~~~~~-~~~v~l~l~~~---~-~P~~~~~~v~y~L~-~~~L~i~~~~~N~~~~~~~ 143 (291)
T 3nre_A 73 QPNVEWDAHYLHGDGW---LGEWQCVSHS-DDSLCLVYEHR---S-GVYHYRVSQAFHLT-ADTLTVTLSVTNQGAETLP 143 (291)
T ss_dssp CCCSTTCSSCBSBSGG---GSBCEEEEEC-SSEEEEEEEEE---S-SSCEEEEEEEEEEC-SSEEEEEEEEEECSSSCEE
T ss_pred CCCCCCCCCCCCCchh---cceeEEEEcc-CCEEEEEEeCC---C-CCceEEEEEEEEEe-CCeEEEEEEEEECCCCCcc
Confidence 99986 899999955 9999999874 78999999874 5 99999999999998 5899999999999 99999
Q ss_pred EeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccCCCCcceeeEeCCC
Q 043310 188 VNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELPDGYDINYVLDNP 267 (359)
Q Consensus 188 ~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~~~g~D~~f~l~~~ 267 (359)
|++|+||||||++ +|+|++++++++++|+++||||++ .+.++++||+.+++|++. ++||+|++..
T Consensus 144 ~~~~~H~YFnl~~-------~~~l~i~a~~~~~~d~~~iPtg~~-~v~~t~~df~~~~~l~~~------~~D~~f~~~~- 208 (291)
T 3nre_A 144 FGTGWHPYFPLSP-------QTRIQAQASGYWLEREQWLAGEFC-EQLPQELDFNQPAPLPRQ------WVNNGFAGWN- 208 (291)
T ss_dssp ECCEEEEEEECCT-------TCEEEECCSEEEEECGGGCEEEEE-SSCCGGGCCSSCEECCSS------CEEEEEESCC-
T ss_pred ceEEcCccEecCC-------CeEEEEECCEEEEcCCCcCCCccc-cCCCCcccccCCcCCCCc------cccceeecCC-
Confidence 9999999999975 689999999999999999999987 477889999999999864 4999999642
Q ss_pred CCCCcceEEEEEeCCCCcEEEEEecCCE--EEEEcCCCCCccCCCCCccccCceEEEEccC-CCCCCCCCCCCC-ceEEC
Q 043310 268 NPEHLKKVAVVSESVSGRKMELWTNKPG--VQFYTSNMLGKVMGKDGFVYSNYAGFCLETQ-GFPDSVNNPNFP-SQVVN 343 (359)
Q Consensus 268 ~~~~~~~~~~l~~~~~g~~l~v~t~~p~--l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~-~~pda~n~~~~~-~~~L~ 343 (359)
..|+|.++.+|++|+|+++.|+ +|||||+.. .+..|. +.+|||||| ++|||+|+++++ +++|+
T Consensus 209 ------~~a~l~~~~~g~~l~v~t~~p~~~~~vyt~~~~------~~~~~~-~~~vclEp~~~~pda~n~~~~~~~~~L~ 275 (291)
T 3nre_A 209 ------GQARIEQPQEGYAIIMETTPPAPCYFIFVSDPA------FDKGYA-FDFFCLEPMSHAPDDHHRPEGGDLIALA 275 (291)
T ss_dssp ------SEEEEEEGGGTEEEEEEEESCCSEEEEEECCTT------TCTTCC-SCEEEEEEESSCTTGGGSGGGTTCEEEC
T ss_pred ------ccEEEEECCCCeEEEEEeCCCCceEEEEcCCCC------CCCCcc-CCEEEEcCccCCCCCCcCCCCCCCEEEC
Confidence 2689999999999999999887 999999731 123444 689999999 799999998875 89999
Q ss_pred CCCEEEEEEEEEEEe
Q 043310 344 PGETYNHVMVYRFTA 358 (359)
Q Consensus 344 pGe~~~~~~~y~f~~ 358 (359)
|||+|+.+++|+|+.
T Consensus 276 PGe~~~~~~~~~~~~ 290 (291)
T 3nre_A 276 PGESTTSEMSLRVEW 290 (291)
T ss_dssp TTCEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEEEe
Confidence 999999999999974
No 8
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=100.00 E-value=2.1e-59 Score=449.99 Aligned_cols=304 Identities=14% Similarity=0.230 Sum_probs=258.9
Q ss_pred CceeEEEEEEeCCEEEEEe-ccCcEEEEEEeeCCCCceeeEEecCCC---ccccccCCCcccceEeeCCCccCCCEEEEC
Q 043310 29 CEAVGVYKLKRGDLSLKFT-NYGATMLSAVIPDKNGKLADIVLGFDS---VKDYKTDNTYFGAIVGRVANRISRAQFTLN 104 (359)
Q Consensus 29 ~~~~~~~~L~n~~~~v~i~-~~Ga~i~sl~~~~~~G~~~dvl~g~~~---~~~y~~~~~~~G~~l~P~anRi~~g~f~~~ 104 (359)
-..++.|+|+|+.++|+|+ ++||+|+||++++ +| +|+||++++ .+.|..++.++|++|+|++|||++|+|+++
T Consensus 15 ~~g~~~~~L~n~~~~~~i~p~~Ga~l~s~~~~~-~g--~~~l~~~~~~~~~~~y~~~~~~~G~pv~~p~nRi~~g~f~~~ 91 (341)
T 3os7_A 15 WSEHKCIRFAAGGYEALIIPDVGGNVVELKDTN-KG--VTILRTPKKDLKFEDFKNRPQVYGLPVLFPPNRIDDGTFKLG 91 (341)
T ss_dssp TTTEEEEEEEETTEEEEEETTTTTEEEEEEETT-TT--EECBCCCCTTCCHHHHHHSGGGSSCCEESSCSEEETTEEEET
T ss_pred ECCEEEEEEeCCCEEEEEchhcCCEEEEEEeCC-CC--CeEEEcCCcccchhhhhhCCcccceeEeCCCCcccCCEEEEC
Confidence 3457899999999999998 8999999999865 35 799999877 578887888999888888999999999999
Q ss_pred CEEEEccCCC--CCCCCCCCCCCCCccceEEEEeee---ccEEEEEEEcCCCCC---CCCeeEEEEEEEEEeCCCeEEEE
Q 043310 105 GTRYQLINND--GDNMLHGGPRGFSEVIWKVKSHEV---NSHITFTYNSLEGEQ---GFPGDLAVSVTYMFVGENNLVVK 176 (359)
Q Consensus 105 G~~y~l~~N~--~~~~lHG~~~g~~~~~w~v~~~~~---~~~v~l~~~~~~~~~---gyP~~~~~~vty~L~~~~~L~i~ 176 (359)
|++|+|++|+ ++|++|||++ ++.|++++..+ ..+|+|++.++++++ +|||+|+++++|+|+ +++|+|+
T Consensus 92 G~~y~l~~N~~~~~~~lHG~~~---~~~W~v~~~~~~~~~~~v~~~~~~~d~~~~~~g~P~~~~~~v~y~L~-~~~L~i~ 167 (341)
T 3os7_A 92 DKTYKFPINEAKNNNYIHGFIK---NSKWTVHKKKIDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELS-SKGLKQT 167 (341)
T ss_dssp TEEEECCCSBTTTTEEESCSGG---GSCCEEEEEEEETTEEEEEEEEEECTTSTTTTTSCCCEEEEEEEEEE-TTEEEEE
T ss_pred CEEEEccCCCCCCCcCccCCcc---cCcEEEEEeecCCCccEEEEEEEeCCCcchhhcCCceEEEEEEEEEe-CCeEEEE
Confidence 9999999998 4899999988 99999987632 136788888876554 999999999999998 4799999
Q ss_pred EEEEeC-CCceeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccCC
Q 043310 177 MKAKPL-EKATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELP 255 (359)
Q Consensus 177 ~~~~n~-~~~~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~~ 255 (359)
|+++|+ +++|||++|+|||||+++..++++.+|+|++++++++++|+++||||++.+++++++||+....+.. .
T Consensus 168 ~~~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~~~~df~~~~~~~~-----~ 242 (341)
T 3os7_A 168 TSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVA-----S 242 (341)
T ss_dssp EEEEECSSSCEEECCEECCEEESSCBTTCCGGGEEEEECEEEEEEECTTSCEEEEEECCCGGGGGGGTTCBCTT-----S
T ss_pred EEEEeCCCCcEEEEEecCceeecCCCCCCCcccEEEEEeCCcEEecCcccCCCCccccCCCccchhhcCCcccC-----C
Confidence 999999 9999999999999999987667899999999999999999999999998889888899986332211 1
Q ss_pred CCcceeeEeCCCCCCC-cceEEEEEeCCCCcEEEEEe--cCCEEEEEcCCCCCccCCCCCccccCceEEEEccC-CCCCC
Q 043310 256 DGYDINYVLDNPNPEH-LKKVAVVSESVSGRKMELWT--NKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQ-GFPDS 331 (359)
Q Consensus 256 ~g~D~~f~l~~~~~~~-~~~~~~l~~~~~g~~l~v~t--~~p~l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~-~~pda 331 (359)
.++||+|+++....++ ....|+|.++.++++|+|++ ++|++||||++. .++||||||| ++|||
T Consensus 243 ~~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~pDa 309 (341)
T 3os7_A 243 HPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMG-------------DKKYACIEPQTSIINS 309 (341)
T ss_dssp SCCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEECGGG-------------CSSEEEEEEESSCTTG
T ss_pred cchhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEEcCCC-------------CCCEEEECCccCCCCc
Confidence 3599999975210011 12479999999999999998 689999999852 2369999999 89999
Q ss_pred CCCCCC----CceEECCCCEEEEEEEEEEE
Q 043310 332 VNNPNF----PSQVVNPGETYNHVMVYRFT 357 (359)
Q Consensus 332 ~n~~~~----~~~~L~pGe~~~~~~~y~f~ 357 (359)
+|++++ ++++|+|||+++.+++|++.
T Consensus 310 ~n~~~~~~~~g~~~L~PGe~~~~~~~i~v~ 339 (341)
T 3os7_A 310 PNVKLDRSVSGFKTLKPNESWSGVCKLYIE 339 (341)
T ss_dssp GGCSSCHHHHCCEEECTTCEEEEEEEEEEE
T ss_pred cCCCCcccccCceEECCCCEEEEEEEEEEE
Confidence 999864 78999999999999999875
No 9
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=100.00 E-value=5.8e-58 Score=437.66 Aligned_cols=295 Identities=19% Similarity=0.226 Sum_probs=252.5
Q ss_pred CceeEEEEEEeCCEEEEEe-ccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCcccceEeeCCCccCCCEEEECCEE
Q 043310 29 CEAVGVYKLKRGDLSLKFT-NYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTLNGTR 107 (359)
Q Consensus 29 ~~~~~~~~L~n~~~~v~i~-~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G~~l~P~anRi~~g~f~~~G~~ 107 (359)
-..+..|+|+|+.++|+|. ++||+|+||++++ +| +|+||++++.+.|..++.++|++|+|++|||++|+|+++|++
T Consensus 11 ~~g~~~~~L~n~~~~~~i~p~~GA~l~s~~~~~-~g--~~~l~~~~~~~~~~~~~~~~G~pv~~p~nRi~~g~~~~~G~~ 87 (326)
T 3mwx_A 11 YLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKT-TN--VQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRT 87 (326)
T ss_dssp ETTEEEEEEEESSEEEEEETTTTTEEEEEEETT-TT--EECBCCCSSHHHHHHCTTSSSCCEEBSCSEEETTEEEETTEE
T ss_pred ECCeEEEEEECCCEEEEEchhcCCEEEEEEecC-CC--ceEEccCcChhHhhcCccccCceEcCCCCcccCCEEEECCEE
Confidence 4557889999999999999 7999999999865 35 799999988888988889999877777999999999999999
Q ss_pred EEccCCC--CCCCCCCCCCCCCccceEEEEeee---ccEEEEEEEcCCCC---CCCCeeEEEEEEEEEeCCCeEEEEEEE
Q 043310 108 YQLINND--GDNMLHGGPRGFSEVIWKVKSHEV---NSHITFTYNSLEGE---QGFPGDLAVSVTYMFVGENNLVVKMKA 179 (359)
Q Consensus 108 y~l~~N~--~~~~lHG~~~g~~~~~w~v~~~~~---~~~v~l~~~~~~~~---~gyP~~~~~~vty~L~~~~~L~i~~~~ 179 (359)
|+|++|+ ++|++|||++ ++.|++++... +.+|+|++.+++++ ++|||+|+++++|+|+ +++|+|+|++
T Consensus 88 y~l~~N~~~~~~~lHG~~~---~~~W~v~~~~~~~~~~~v~~~~~~~~~~~~~~g~P~~~~~~v~y~L~-~~~L~i~~~~ 163 (326)
T 3mwx_A 88 YHFDINEKDKHNHLHGFLY---HEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIK-ENTLFKHATV 163 (326)
T ss_dssp EECCCCBTTTTEEESBSCT---TSCCEEEEEEEESSCEEEEEEEEGGGCHHHHHHSCSCEEEEEEEEEE-TTEEEEEEEE
T ss_pred EEccCCCCCCCccccCCcc---CCceEEEEeeccCCceEEEEEEEeCCCCccccCCCceEEEEEEEEEc-CCcEEEEEEE
Confidence 9999997 6999999988 99999987642 24789999987654 3999999999999998 5899999999
Q ss_pred EeC-CCceeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccCCCCc
Q 043310 180 KPL-EKATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELPDGY 258 (359)
Q Consensus 180 ~n~-~~~~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~~~g~ 258 (359)
+|+ +++|||++|+|||||++ +.+|+|++++++++++|+++||||++.++ ++.+||+.++.+. ..++
T Consensus 164 ~N~~~~~~~~~~~~H~yFnl~------~~~~~l~~~a~~~~~~d~~~iptg~~~~~-~~~~~~~~~~~~~------~~~~ 230 (326)
T 3mwx_A 164 MNKGKEAFPWGIGYHTTFIFP------AESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLR------HKQL 230 (326)
T ss_dssp EECSSSCEEECCEECCCEECC------TTTEEEEESEEEEEEECTTSCEEEEEEEC-TTHHHHHHCBCCT------TCCC
T ss_pred EECCCCceeeEEeeccccCCC------CCCEEEEEECCcEEEeCCccCCCCccccC-cchhhcccCcccC------Cccc
Confidence 999 99999999999999997 46899999999999999999999998887 6778887543322 2358
Q ss_pred ceeeEeCCCCCCCcceEEEEEeCCCCcEEEEEe--cCCEEEEEcCCCCCccCCCCCccccCceEEEEccC-CCCCCCCCC
Q 043310 259 DINYVLDNPNPEHLKKVAVVSESVSGRKMELWT--NKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQ-GFPDSVNNP 335 (359)
Q Consensus 259 D~~f~l~~~~~~~~~~~~~l~~~~~g~~l~v~t--~~p~l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~-~~pda~n~~ 335 (359)
||+|++.....+ ....|+|.++.++++|+++. ++|+++||||+. .++||||||| ++|||+|++
T Consensus 231 D~~f~~~~~~~~-~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~~da~n~~ 296 (326)
T 3mwx_A 231 DDVFLSSYQKRG-GENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-------------KQGYLCPEPYTWVTNAVNLD 296 (326)
T ss_dssp EEEEEESHHHHC-SCCEEEEEETTTTEEEEEEECTTCCEEEEECTTS-------------CSSEEEEEEESSCTTGGGCC
T ss_pred cceeeeccccCC-CceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCC-------------CCCEEEECCccCCCCccccC
Confidence 999998510001 13479999999999999984 789999999862 1359999999 699999997
Q ss_pred C----CCceEECCCCEEEEEEEEEEE
Q 043310 336 N----FPSQVVNPGETYNHVMVYRFT 357 (359)
Q Consensus 336 ~----~~~~~L~pGe~~~~~~~y~f~ 357 (359)
. .++++|+|||+++.+++|+|.
T Consensus 297 ~~~~~~g~~~L~PGe~~~~~~~i~~~ 322 (326)
T 3mwx_A 297 LPSSLTGLQVLEPGEETTAKSSITIE 322 (326)
T ss_dssp SCHHHHCCEEECTTCEEEEEEEEEEE
T ss_pred CCccccCCeEECCCCeEEEEEEEEEE
Confidence 4 478999999999999999986
No 10
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=100.00 E-value=1.6e-54 Score=407.95 Aligned_cols=277 Identities=17% Similarity=0.255 Sum_probs=233.0
Q ss_pred EEEEEeCCEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCcccceEeeCCCccCCCEEEECCEEEEccCC
Q 043310 34 VYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFGAIVGRVANRISRAQFTLNGTRYQLINN 113 (359)
Q Consensus 34 ~~~L~n~~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G~~l~P~anRi~~g~f~~~G~~y~l~~N 113 (359)
+|+|+|++++|+|.++||+|+||++++ +| +|+||+.+ ++|... .|++||||+|||++|+|+++|++|+|++
T Consensus 2 ~~~l~n~~~~~~i~~~Ga~l~s~~~~~-~g--~e~l~~~~--~~~~~~---~~p~l~P~~~Ri~~g~~~~~G~~y~l~~- 72 (294)
T 3q1n_A 2 MITIENSKFKAGIAERGAELQSLVNKA-DN--YEYVWTGD--KTFWNR---HAPILFPSIGKSNQDQYRLGAKTYPMSQ- 72 (294)
T ss_dssp EEEEECSSEEEEEETBTTEEEEEEETT-TT--EECBCCCC--TTTCSC---SCCEEBSCCSCCGGGEEEETTEEEECCT-
T ss_pred EEEEECCCEEEEEEccCcEEEEEEeCC-CC--CEEEEcCC--hhhccC---CCCEEEeccCCcCCCEEEECCcEEccCC-
Confidence 689999999999999999999999863 56 79999754 233221 3699999999999999999999999985
Q ss_pred CCCCCCCCCCCCCCccceEEEEeeeccEEEEEEEcCCC-CCCCCeeEEEEEEEEEeCCCeEEEEEEEEeC-CCceeEeec
Q 043310 114 DGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSLEG-EQGFPGDLAVSVTYMFVGENNLVVKMKAKPL-EKATPVNLA 191 (359)
Q Consensus 114 ~~~~~lHG~~~g~~~~~w~v~~~~~~~~v~l~~~~~~~-~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~-~~~~p~~lg 191 (359)
||++| ++.|++++.+ +++|+|++.++++ +++|||+|+++++|+|+ +++|+|+|+++|. +++|||++|
T Consensus 73 ------HGf~r---~~~w~~~~~~-~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~-~~~L~i~~~~~N~~~~~~p~~~~ 141 (294)
T 3q1n_A 73 ------HGFAR---DYDFDVSDKS-DSAVTFTQHQNAETLKKFPFEYTLAVTYMLT-DGGLSVHYTVTNDDSKSMPFALG 141 (294)
T ss_dssp ------TBSGG---GSBCEEESCC-SSEEEEEEECCHHHHHHSCCCEEEEEEEEEE-TTEEEEEEEEEECSSSCEEECEE
T ss_pred ------CCCcc---CcceEEEEcc-CCEEEEEEEcCcchhhcCCeEEEEEEEEEEe-CCEEEEEEEEEcCCCCceeeeEe
Confidence 99998 8999998864 7899999999865 68999999999999998 5899999999998 999999999
Q ss_pred ccceeecCCCCCCCeeceEEEEECce----EEeeCCCCCCCCccccCCCCCcC-CCCceeeccccccCCCCcce-eeEeC
Q 043310 192 LHTYWNLGGHSSGDIFSHKLQLFGSH----VTPVNDRLIPTGKITPVTGTPYD-FLQPREIGSKFKELPDGYDI-NYVLD 265 (359)
Q Consensus 192 ~HpYFnl~~~~~~~~~~~~L~i~a~~----~~~~d~~~iPtG~~~~v~~t~~d-f~~~~~l~~~~~~~~~g~D~-~f~l~ 265 (359)
+|||||+++..++++++|+|+|++++ ++++|+..+|+|+..+.. + +....+|...+ ||| +|+++
T Consensus 142 ~H~yFnl~~~~~~~~~d~~l~~~a~~~~~~~~~~~~~~l~~g~~~~~~----~~~~~~~~l~~~~------fd~d~~~~~ 211 (294)
T 3q1n_A 142 FHPAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFRNGDVEDIP----GAEGNRLPLTHDL------LDGGLVILA 211 (294)
T ss_dssp ECCEEECCBCTTSSBCSCEEEEECCSSCCEEEEESSTTSEEEEEEECT----TCBTTEEECCHHH------HTTCCEEEC
T ss_pred cCcEEEcCCCCCCcccCEEEEEcCCcccceEEeeCCCCcCCCcccccc----cCCCceecCCHHH------hcCCeEEEc
Confidence 99999999876778999999999999 999998889988632221 1 22334454443 885 89887
Q ss_pred CCCCCCcceEEEEEeCCCCcEEEEEec-CCEEEEEcCCCCCccCCCCCccccCceEEEEccC-CCCCCCCCCC-----CC
Q 043310 266 NPNPEHLKKVAVVSESVSGRKMELWTN-KPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQ-GFPDSVNNPN-----FP 338 (359)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~g~~l~v~t~-~p~l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~-~~pda~n~~~-----~~ 338 (359)
.. ....++|.++++++.|+|+++ +|+++|||++.. +.+||||||| ++|||+|.+. .+
T Consensus 212 ~~----~~~~~~l~~~~~g~~l~v~~~~~p~l~iwt~~~~------------~~~~vciEP~tg~~Da~n~~~~~~~k~g 275 (294)
T 3q1n_A 212 NS----EIAKATLASPHHDHSITLDISDFPYLTIWSPEHK------------KAPFIAVEPFDGLPDQAGEPTDWYTKLG 275 (294)
T ss_dssp CT----TCCEEEEECTTCSCCEEEECTTCSEEEEECCTTS------------CCSEEEEEEEESCCCBSSSCCBTTTCTT
T ss_pred CC----CccEEEEEeCCCCcEEEEEECCCCEEEEECcCCC------------CCCEEEEeCcCCCCCCCCCCCchhccCC
Confidence 53 134799999999999999985 899999998521 2469999999 8999999875 37
Q ss_pred ceEECCCCEEEEEEEEEE
Q 043310 339 SQVVNPGETYNHVMVYRF 356 (359)
Q Consensus 339 ~~~L~pGe~~~~~~~y~f 356 (359)
+++|+|||+++.++++++
T Consensus 276 ~~~L~pGe~~~~~~~I~i 293 (294)
T 3q1n_A 276 NTTLSAGANKQLALKVEL 293 (294)
T ss_dssp CEEECTTCEEEEEEEEEE
T ss_pred CEEECCCCEEEEEEEEEE
Confidence 999999999999888876
No 11
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.8e-52 Score=394.65 Aligned_cols=276 Identities=14% Similarity=0.229 Sum_probs=232.3
Q ss_pred EEEEEeCCEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCccc---ceEeeCCCccCCCEEEECCEEEEc
Q 043310 34 VYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFG---AIVGRVANRISRAQFTLNGTRYQL 110 (359)
Q Consensus 34 ~~~L~n~~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G---~~l~P~anRi~~g~f~~~G~~y~l 110 (359)
+|+|+|+.++|+|.++||+|+||+.++ +| +|+||+. ++.+|| ++||||+|||++|+|+++|++|+|
T Consensus 2 ~~~l~n~~~~~~i~~~GA~l~s~~~~~-~~--~e~l~~~--------~~~~~~~~~pil~P~~nRi~~g~~~~~G~~y~l 70 (307)
T 3dcd_A 2 DYTIENNMIKVVISDHGAEIQSVKSAH-TD--EEFMWQA--------NPEIWGRHAPVLFPIVGRLKNDEYTYKGKTYHL 70 (307)
T ss_dssp EEEEECSSEEEEEETBTTEEEEEEETT-TC--CBCBCCC--------CTTTCCCSSCEEBSCSSCCGGGEEEETTEEEEC
T ss_pred EEEEECCCEEEEEEccCcEEEEEEECC-CC--cEEEECC--------ChhhcCCCCcEEEeecCccCCCeEEECCEEEec
Confidence 689999999999999999999998432 24 7999863 344555 899999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCccceEEEEeeeccEEEEEEEcC-CCCCCCCeeEEEEEEEEEeCCCeEEEEEEEEeC-CCceeE
Q 043310 111 INNDGDNMLHGGPRGFSEVIWKVKSHEVNSHITFTYNSL-EGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPL-EKATPV 188 (359)
Q Consensus 111 ~~N~~~~~lHG~~~g~~~~~w~v~~~~~~~~v~l~~~~~-~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~-~~~~p~ 188 (359)
++ ||++| ++.|++++.. +++|+|++.++ ++.++|||+|+++++|+|+ +++|+|+|+++|+ +++|||
T Consensus 71 ~~-------HGf~r---~~~w~v~~~~-~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~-~~~L~i~~~v~N~g~~~~p~ 138 (307)
T 3dcd_A 71 GQ-------HGFAR---NADFEVENHT-KESITFLLKDNEETRKVYPFKFEFRVNYNLM-NNLLEENFSVVNKSDETMIF 138 (307)
T ss_dssp CT-------TBSGG---GSBCEEEEEE-TTEEEEEEECCHHHHHHSCCCEEEEEEEEEE-TTEEEEEEEEEECSSSCEEE
T ss_pred CC-------CCCcc---CcEEEEEEec-CCEEEEEEecCcchhhhCCCceEEEEEEEEe-CCEEEEEEEEECCCCCcEeE
Confidence 96 99998 8999999874 78999999987 4678999999999999998 6899999999999 999999
Q ss_pred eecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCC-CCCcCCCCceeeccccccCCCCcc-eeeEeCC
Q 043310 189 NLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVT-GTPYDFLQPREIGSKFKELPDGYD-INYVLDN 266 (359)
Q Consensus 189 ~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~-~t~~df~~~~~l~~~~~~~~~g~D-~~f~l~~ 266 (359)
++|+|||||+++..++++++|+|+|++++.++. ..+|+|. ++.. .+.++++...+|.+.+ || ++++++.
T Consensus 139 ~~g~HpyF~~~~~~~~~~~d~~L~~~a~~~~~~--~~l~~g~-~~~~~~~~~~~~~~~~l~~~~------fd~da~~~~~ 209 (307)
T 3dcd_A 139 GVGGHPGFNLPTDHGENKEDFYFDMHPSVTRVR--IPLKDAS-LDWNNRSLAPTDSLIALSDDL------FKDDALIYEL 209 (307)
T ss_dssp CEEECCEEECCCTTSCCGGGEEEEEESCCCEEE--CCEETTE-ECGGGCEEECTTSCEECCSGG------GTTSCEEEEC
T ss_pred EEEcCcEEEcCCCCCCccccEEEEEcCCCceee--eecCCcc-cccccccccccCCcccCCHHH------cCCceEEEcC
Confidence 999999999998767789999999999887643 4567774 3433 2346777777777665 77 4788765
Q ss_pred CCCCCcc-eEEEEEeCCCCcEEEEEec-CCEEEEEcCCCCCccCCCCCccccCceEEEEccC-CCCCCCCCCC-----CC
Q 043310 267 PNPEHLK-KVAVVSESVSGRKMELWTN-KPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQ-GFPDSVNNPN-----FP 338 (359)
Q Consensus 267 ~~~~~~~-~~~~l~~~~~g~~l~v~t~-~p~l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~-~~pda~n~~~-----~~ 338 (359)
. .. ..++|.++++++.|+|..+ +|+++|||++.. ..+||||||| ++|||+|.+. .+
T Consensus 210 ~----~~~~~v~l~~~~~g~~v~v~~~~fp~l~iwt~~~~------------~~~fvciEP~tg~~Da~n~~~~~~~k~g 273 (307)
T 3dcd_A 210 R----GNDNKVSLRTDKNKFHVNVWTRDAPFVGIWSQYPK------------TDNYVCIEPWWGIADRDDADGDLEHKYG 273 (307)
T ss_dssp C----SSCEEEEEEETTSSCEEEEEEETCSEEEEECCSSS------------CCSEEEEEEEESCCCBTTCCSBGGGCTT
T ss_pred C----CCceEEEEEeCCCCcEEEEEECCCCEEEEECcCCC------------CCCEEEEccccCCCCCCCCCCchhccCC
Confidence 3 13 5799999999999999874 799999998311 2469999999 8999999875 37
Q ss_pred ceEECCCCEEEEEEEEEEE
Q 043310 339 SQVVNPGETYNHVMVYRFT 357 (359)
Q Consensus 339 ~~~L~pGe~~~~~~~y~f~ 357 (359)
+++|+|||+++.++++++.
T Consensus 274 l~~L~PGe~~~~~~~i~~~ 292 (307)
T 3dcd_A 274 MNHLKPGKEFQAGFSMTYH 292 (307)
T ss_dssp CEEECTTCEEEEEEEEEEE
T ss_pred CEEECCCCEEEEEEEEEEE
Confidence 9999999999999998874
No 12
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=2.4e-46 Score=351.42 Aligned_cols=271 Identities=17% Similarity=0.283 Sum_probs=216.7
Q ss_pred ccCCceeEEEEEEeC--CEEEEEe-ccCcEEEEEEeeCCCCceeeEEecCCCccccccC-C-Cccc-ceEeeCCCccCCC
Q 043310 26 TESCEAVGVYKLKRG--DLSLKFT-NYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTD-N-TYFG-AIVGRVANRISRA 99 (359)
Q Consensus 26 ~~~~~~~~~~~L~n~--~~~v~i~-~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~-~-~~~G-~~l~P~anRi~~g 99 (359)
+++.+.+..|+|+|+ +++++|. ++||+|+||+. +| +|+|+ ++. +.|... . .+.| |+||||+|||++|
T Consensus 5 ~~~~~~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~---~g--~~~l~-~~~-~~~~~~~~~~~gg~Pvl~P~~gri~~g 77 (289)
T 3k25_A 5 SFTPDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTV---QG--QPILY-FDR-ERFQDPSLSVRGGIPILFPICGNLPQD 77 (289)
T ss_dssp EEECCBCCEEEEEETTTTEEEEEEGGGTSEEEEEEE---TT--EECBC-BCT-TGGGSTTSCCCBSBCEEBSCSSCCGGG
T ss_pred eeccCCceEEEEECCCCCeEEEeehhcCCEEEEEEe---CC--EEEEe-cCh-hhccCcccccCCCCCEEECCCCCCCCC
Confidence 455677999999994 7999997 99999999987 47 68885 443 444443 2 3446 5899999999999
Q ss_pred EEEECCEEEEccCCCCCCCCCCCCCCCCccceEEEEeee--ccEEEEEEEcCC-CCCCCCeeEEEEEEEEEeCCCeEEEE
Q 043310 100 QFTLNGTRYQLINNDGDNMLHGGPRGFSEVIWKVKSHEV--NSHITFTYNSLE-GEQGFPGDLAVSVTYMFVGENNLVVK 176 (359)
Q Consensus 100 ~f~~~G~~y~l~~N~~~~~lHG~~~g~~~~~w~v~~~~~--~~~v~l~~~~~~-~~~gyP~~~~~~vty~L~~~~~L~i~ 176 (359)
+|+++|++|+|++ ||++| ++.|++++..+ +.+|+|++.+++ +.++|||+|+++++|+|+ +++|+|+
T Consensus 78 ~~~~~g~~y~l~~-------HGf~r---~~~W~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~-~~~L~i~ 146 (289)
T 3k25_A 78 QFNHAGKSYRLKQ-------HGFAR---DLPWEVIGQQTQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQ-GHSLRIE 146 (289)
T ss_dssp EEEETTEEEECCT-------TBSGG---GSCCEEEEEECSSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEE-TTEEEEE
T ss_pred EEEECCEEeecCC-------CCCcc---cCCeEEEEecCCCCcEEEEEEecChhHHhcCCceEEEEEEEEEe-CCEEEEE
Confidence 9999999999995 99998 99999987631 248999999875 478999999999999998 5899999
Q ss_pred EEEEeC-CCceeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccCC
Q 043310 177 MKAKPL-EKATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELP 255 (359)
Q Consensus 177 ~~~~n~-~~~~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~~ 255 (359)
|+++|+ +++|||++|+|||||++. +.+++++.++..++..++ +...+..+ .+++..
T Consensus 147 ~~~~N~~~~~~~~~~~~H~yF~~~~-----~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~~~~~~------------ 203 (289)
T 3k25_A 147 QRIANLGDQRMPFSLGFHPYFFCRE-----KLGITLAIPANDYLDQKT-----GDCHGYDG-QLNLTS------------ 203 (289)
T ss_dssp EEEEECSSSCEEECCEECCEEECSC-----CTTCEEECSCSEEEETTT-----CCEEECCS-CCCTTS------------
T ss_pred EEEEcCCCCcceeEEecCcEEccCC-----cceEEEEcCccccccccc-----CcccccCC-cccCCc------------
Confidence 999998 999999999999999985 457888877777765432 22222221 244432
Q ss_pred CCcceeeEeCCCCCCCcceEEEEEeCCCCcEEEEEec--CCEEEEEcCCCCCccCCCCCccccCceEEEEccC-CCCCCC
Q 043310 256 DGYDINYVLDNPNPEHLKKVAVVSESVSGRKMELWTN--KPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQ-GFPDSV 332 (359)
Q Consensus 256 ~g~D~~f~l~~~~~~~~~~~~~l~~~~~g~~l~v~t~--~p~l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~-~~pda~ 332 (359)
..+|++|.... ...++|.++.++++|+|..+ +|+++||+++. ++||||||| ++|||+
T Consensus 204 ~~~D~~~~~~~------~~~~~l~~~~~~~~i~v~~~~~~~~~vvw~~~~--------------~~fvCvEP~~~~~da~ 263 (289)
T 3k25_A 204 PELDLAFTQIS------QPRAHFIDPDRNLKIEVSFSELYQTLVLWTVAG--------------KDYLCLEPWSGPRNAL 263 (289)
T ss_dssp SEEEEEECCCS------SSEEEEEETTTTEEEEEEECTTCCEEEEEEESS--------------SCEEEEEEESSCTTHH
T ss_pred hhhceEeecCC------CCeEEEEECCCCCEEEEEeCCCCcEEEEEecCC--------------CCEEEEccccCCCCcc
Confidence 12898887321 23689999999999999875 59999999752 369999999 899999
Q ss_pred CCCCCCceEECCCCEEEEEEEEEEEe
Q 043310 333 NNPNFPSQVVNPGETYNHVMVYRFTA 358 (359)
Q Consensus 333 n~~~~~~~~L~pGe~~~~~~~y~f~~ 358 (359)
|.+. ++++|+|||+++.+++|++..
T Consensus 264 n~~~-~~~~L~PGe~~~~~~~i~v~~ 288 (289)
T 3k25_A 264 NSGE-QLAWVEPYSSRSAWVNFQVST 288 (289)
T ss_dssp HHCT-TCEEECTTEEEEEEEEEEEEC
T ss_pred cCCC-CcEEECCCCeEEEEEEEEEEe
Confidence 9875 899999999999999998764
No 13
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=2e-43 Score=334.71 Aligned_cols=260 Identities=17% Similarity=0.203 Sum_probs=210.0
Q ss_pred CceeEEEEEEeCCEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCccc--ceEeeCCCccCCCEEEECCE
Q 043310 29 CEAVGVYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFG--AIVGRVANRISRAQFTLNGT 106 (359)
Q Consensus 29 ~~~~~~~~L~n~~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G--~~l~P~anRi~~g~f~~~G~ 106 (359)
-..+..|+|+|+.++|+|.++||+|+||+++ +| +|+||+. +.+.|..++.++| ++||||+|||++|
T Consensus 38 ~~~~~~~~L~n~~~~a~I~~~GA~l~s~~~~--~g--~evL~~~-~~~~~~~~~~~~GG~pil~P~~gRi~~g------- 105 (309)
T 2hta_A 38 LDDLDLIVVDHPQVKASFALQGAHLLSWKPV--GE--EEVLWLS-NNTPFKTGVALRGGVPICWPWFGPAAQQ------- 105 (309)
T ss_dssp ETTEEEEEEEETTEEEEEETBTTEEEEEEET--TS--CCCBCBC-TTCCCCTTCCCSBSBCEEBSCCSSCSST-------
T ss_pred cCCceEEEEeCCCeEEEEeccCcEEEEEEeC--CC--CEEEeCC-chHhccCCCCeeccceEEEecCCCCCCC-------
Confidence 3457889999999999999999999999985 24 6898865 6677877666665 6999999999983
Q ss_pred EEEccCCCCCCCCCCCCCCCCccceEEEEeee-c--cEEEEEEEcC-CCCCCCCeeEEEEEEEEEeCCCeEEEEEEEEeC
Q 043310 107 RYQLINNDGDNMLHGGPRGFSEVIWKVKSHEV-N--SHITFTYNSL-EGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPL 182 (359)
Q Consensus 107 ~y~l~~N~~~~~lHG~~~g~~~~~w~v~~~~~-~--~~v~l~~~~~-~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~ 182 (359)
++++||++| ++.|++++..+ + .+|+|++.++ +++++|||+|+++++|+| + ++|+|+|+++|
T Consensus 106 ---------~~~~HGfar---~~~W~v~~~~~~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~-~~L~i~~~~~N- 170 (309)
T 2hta_A 106 ---------GLPSHGFAR---NLPWALKAHNEDDNGVMLTFELQSSEATRKYWPHDFTLLARFKV-G-KTCEIELEAHG- 170 (309)
T ss_dssp ---------TCCTTBSGG---GSBCEEEEEEECSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE-S-SSEEEEEEEES-
T ss_pred ---------CCCCccCcC---CCceEEEeEecCCCceEEEEEeCCChHHhhcCCCceEEEEEEEE-C-CceEEEEEEEC-
Confidence 256799998 99999987542 1 5799999886 467899999999999999 4 89999999997
Q ss_pred CCceeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccCCCCcceee
Q 043310 183 EKATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELPDGYDINY 262 (359)
Q Consensus 183 ~~~~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~~~g~D~~f 262 (359)
+|||++|+|||||+++ +.+++|++.++.+++ .+|+|+..++.++++||+. ++|++|
T Consensus 171 --~~~~~~g~H~YFnl~~-----~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~df~~-------------~~D~~~ 226 (309)
T 2hta_A 171 --EFATTSALHSYFNVGD-----IANVKVSGLGDRFID----KVNDAKEGVLTDGIQTFPD-------------RTDRVY 226 (309)
T ss_dssp --SEEEEEEECCEEECSC-----GGGCEEECCCSEEEE----TTTTTEEEECSSSCEECSS-------------CEEEEE
T ss_pred --CeEehhcCCceEecCC-----ccceEEECCCCceEe----ccCCcccccccCCceecCC-------------ccCcEE
Confidence 8999999999999985 457899988777753 5889988788888898873 389999
Q ss_pred EeCCCCCCCcceEEEEEeCCCCcEEEEEec-CCEEEEEcCCCCCcc---CCCCCccccCceEEEEccCCCCCCCCCCCCC
Q 043310 263 VLDNPNPEHLKKVAVVSESVSGRKMELWTN-KPGVQFYTSNMLGKV---MGKDGFVYSNYAGFCLETQGFPDSVNNPNFP 338 (359)
Q Consensus 263 ~l~~~~~~~~~~~~~l~~~~~g~~l~v~t~-~p~l~vyt~~~~~~~---~~~~~~~~~~~~~iciEP~~~pda~n~~~~~ 338 (359)
. +. ...++|.++.++++|+|+++ +|++||||| +.... .+..+..| +++||||||.. ++
T Consensus 227 ~-~~------~~~~~l~~~~~g~~l~v~~~~~p~~~vwtp-~~~~~~~~~d~~~~~~--~~~vClEp~~~--------~~ 288 (309)
T 2hta_A 227 L-NP------EACSVIHDATLNRTIDVVHHHHLNVVGWNP-GPALSVSMGDMPDDGY--KTFVCVETVYA--------TA 288 (309)
T ss_dssp S-SC------CSEEEEEETTTTEEEEEEEESCSEEEEEEC-HHHHHHHCTTSCTTGG--GGEEEEEEEEE--------EE
T ss_pred e-CC------CCCEEEEeCCCCcEEEEEECCCCcEEEECC-CcccccccccCCcccc--ccEEEECeeec--------CC
Confidence 5 32 13689999999999999986 899999998 32110 11112222 46999999964 47
Q ss_pred ceEECCCCEEEEEEEEEEE
Q 043310 339 SQVVNPGETYNHVMVYRFT 357 (359)
Q Consensus 339 ~~~L~pGe~~~~~~~y~f~ 357 (359)
.++|+|||+++.+++|+|.
T Consensus 289 ~~~L~PGe~~~~~~~~~~~ 307 (309)
T 2hta_A 289 PQQATEEKPSRLAQTICVA 307 (309)
T ss_dssp EEEEBTTBCEEEEEEEEEE
T ss_pred CEEECCCCeEEEEEEEEEe
Confidence 8999999999999999985
No 14
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=2.6e-42 Score=325.36 Aligned_cols=262 Identities=17% Similarity=0.193 Sum_probs=194.3
Q ss_pred eEEEEEEeCC-E--EEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCccc--ceEeeCCCccCCCEEEECCE
Q 043310 32 VGVYKLKRGD-L--SLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFG--AIVGRVANRISRAQFTLNGT 106 (359)
Q Consensus 32 ~~~~~L~n~~-~--~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G--~~l~P~anRi~~g~f~~~G~ 106 (359)
+..|+|+|+. + +++|+++||+|+||++ +| +|+||.. +.+.|..+..++| ++||||+||+++|+ +
T Consensus 7 ~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~---~G--~~vl~~~-~~~~~~~~~~~~GGip~l~P~~gr~~~~~-----~ 75 (297)
T 2cir_A 7 DKEVVLTHPADETTSVHILKYGATVYSWKL---KS--EEQLWLS-TAAKLDGSKPVRGGIPLVFPVFGKNSTDE-----H 75 (297)
T ss_dssp SSEEEEEETTEEEEEEEEETBTTEEEEEEE---TT--EECBCBC-TTCCCSSSSCCSBSBCEEBSCSSCCSSST-----T
T ss_pred CCEEEEeCCCCceeEEEEECCCcEEEEEEe---CC--eEEEecC-cHHHhcCCCCccCCCCEEEEecCCCCCCc-----c
Confidence 5689999976 5 8999999999999997 36 5888754 6777887777888 99999999999874 4
Q ss_pred EEEccCCCCCCCCCCCCCCCCccceEEEEee-ec-cEEEEEEEc----CCCCCCCCeeEEEEEEEEEeCCCeEEEEEEEE
Q 043310 107 RYQLINNDGDNMLHGGPRGFSEVIWKVKSHE-VN-SHITFTYNS----LEGEQGFPGDLAVSVTYMFVGENNLVVKMKAK 180 (359)
Q Consensus 107 ~y~l~~N~~~~~lHG~~~g~~~~~w~v~~~~-~~-~~v~l~~~~----~~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~ 180 (359)
+|+|+ +||++| ++.|++++.. ++ .+|+|++.+ ++++++|||+|+++++|+|++ ++|+|+|+++
T Consensus 76 ~y~l~-------~HGfar---~~~W~v~~~~~~~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~~-~~L~i~~~~~ 144 (297)
T 2cir_A 76 LSKLP-------QHGLAR---NSTWEFLGQTKENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGS-DYLKTAIEVE 144 (297)
T ss_dssp GGGSC-------TTBSGG---GSBCEEEEEEEETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECS-SEEEEEEEEE
T ss_pred cCCCC-------CccccC---CCceEEEeeccCCceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEcC-CEEEEEEEEE
Confidence 55554 599998 9999998753 12 579999988 566789999999999999984 8999999999
Q ss_pred eC--CCceeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCC-CcCCCCceeecccc--ccCC
Q 043310 181 PL--EKATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGT-PYDFLQPREIGSKF--KELP 255 (359)
Q Consensus 181 n~--~~~~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t-~~df~~~~~l~~~~--~~~~ 255 (359)
|+ +++|||++|+|||||+++ +.+.. |+| ++++ .+|++.+.++...- ..+.
T Consensus 145 N~~~d~~~~~~~~~H~YFnl~~-----~~~~~----------------~~g----v~~~~~~d~~~~~~~~~~~~~~~~~ 199 (297)
T 2cir_A 145 NTSSSKELKFNWLFHTYFRIED-----IEGTM----------------VSN----LAGMKLYDQLLKESYVDKHPVVTFN 199 (297)
T ss_dssp CCCSSCCEEEEEEECCEEECSC-----GGGEE----------------EES----CTTCEEEETTTTEEEECCSSSBCCS
T ss_pred cCCCCcceEEeeecCceEeCCC-----ccceE----------------Eec----CCCCccEeccCCccccccCCccccC
Confidence 84 689999999999999985 23321 222 1111 23333222222110 0112
Q ss_pred CCcceeeEeCCCCCCCcceEEEEEeCCCCcEEEEEec-CCEEEEEcCCCCCccC---CC-CCccccCceEEEEccCCCCC
Q 043310 256 DGYDINYVLDNPNPEHLKKVAVVSESVSGRKMELWTN-KPGVQFYTSNMLGKVM---GK-DGFVYSNYAGFCLETQGFPD 330 (359)
Q Consensus 256 ~g~D~~f~l~~~~~~~~~~~~~l~~~~~g~~l~v~t~-~p~l~vyt~~~~~~~~---~~-~~~~~~~~~~iciEP~~~pd 330 (359)
.++||+|.... ....++|.++ +++.|+|+++ +|++||||| +++..+ +. ++..| +++||||||..
T Consensus 200 ~~~D~~~~~~~-----~~~~~~l~~~-~g~~l~v~~~~~p~~~v~t~-~~~~~~~~~~~~~~~~~--~~~vClEp~~~-- 268 (297)
T 2cir_A 200 QETDVIYQNVS-----AERAIQIVDK-GVQIHTLKRYNLPDTVVWNP-WIEKSQGMADFEPKTGY--QQMICIEPGHV-- 268 (297)
T ss_dssp SCEEEEECCCC-----TTCCEEEEET-TEEEEEEEEESCCEEEEEEC-HHHHHHHCTTCCSTTGG--GGEEEEEEEEE--
T ss_pred CccceEEeCCC-----CCccEEEEcC-CCCEEEEEecCCCcEEEECc-chhhccccccCCCcccc--ccEEEECceEC--
Confidence 35899886421 1236899999 9999999987 599999998 432211 11 22223 46999999963
Q ss_pred CCCCCCCCceEECCCCEEEEEEEEEEE
Q 043310 331 SVNNPNFPSQVVNPGETYNHVMVYRFT 357 (359)
Q Consensus 331 a~n~~~~~~~~L~pGe~~~~~~~y~f~ 357 (359)
++.++|+|||+++.+++|+|.
T Consensus 269 ------~~~~~L~pGe~~~~~~~~~~~ 289 (297)
T 2cir_A 269 ------HDFISLAPGKKWNAYQLLCKE 289 (297)
T ss_dssp ------EEEEEECTTCEEEEEEEEECC
T ss_pred ------CCCEEECCCCeEEEEEEEEEE
Confidence 477999999999999999984
No 15
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=99.96 E-value=3.2e-28 Score=225.92 Aligned_cols=247 Identities=17% Similarity=0.213 Sum_probs=168.4
Q ss_pred CceeEEEEEEeCCEEEEEeccCcEEEEEEeeCCCCceeeEEecCCCccccccCCCccc--ceEeeCCCccCCCEEEECCE
Q 043310 29 CEAVGVYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVLGFDSVKDYKTDNTYFG--AIVGRVANRISRAQFTLNGT 106 (359)
Q Consensus 29 ~~~~~~~~L~n~~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~g~~~~~~y~~~~~~~G--~~l~P~anRi~~g~f~~~G~ 106 (359)
-..+..++|+|+..+++|..+||.|+||+..+ +| +|+||- .+.+.+.......| |+|+||+||++
T Consensus 18 ~~~~~~~~l~~~~~~a~i~~~Ga~l~s~~~~~-~g--~e~Lw~-~~~~~~~~~~~irGGiPvlfP~~gr~~--------- 84 (270)
T 1jov_A 18 HNDIPVLHLKHAVGTAKISLQGAQLISWKPQN-AK--QDVLWL-SEVEPFKNGNAIRGGVPICYPWFGGVK--------- 84 (270)
T ss_dssp ETTEEEEEEEETTEEEEEETBTTEEEEEEETT-CS--SCSBCB-CTTCCCCTTSCCSBSCCEEBSSCGGGS---------
T ss_pred eCCceEEEEeCCCcEEEEECCCCEEEEEEECC-CC--ceEEEE-CcHHhcCCCCCccCccEEEEeccCCCC---------
Confidence 44577899999999999999999999998742 24 688873 44444555545555 79999999986
Q ss_pred EEEccCCCCCCCCCCCCCCCCccceEEEEee-eccEEEEEEEcCCCCCCCCeeEEEEEEEEEeCCCeEEEEEEEEeCCCc
Q 043310 107 RYQLINNDGDNMLHGGPRGFSEVIWKVKSHE-VNSHITFTYNSLEGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPLEKA 185 (359)
Q Consensus 107 ~y~l~~N~~~~~lHG~~~g~~~~~w~v~~~~-~~~~v~l~~~~~~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~~~~ 185 (359)
+++||++| ++.|++.++. +++++++++...+. .+ .|+++++|+|. |+++++++|+ .+
T Consensus 85 ----------~~~HGfaR---~~~W~v~~~~~~~~~v~l~~~l~~~--~~--~f~l~~~~~L~----l~~~~~v~N~-g~ 142 (270)
T 1jov_A 85 ----------QPAHGTAR---IRLWQLSHYYISVHKVRLEFELFSD--LN--IIEAKVSMVFT----DKCHLTFTHY-GE 142 (270)
T ss_dssp ----------SSTTBSGG---GSBCEEEEEEEETTEEEEEEEEECT--TS--CEEEEEEEEES----SSEEEEEEEC-CS
T ss_pred ----------CCCCceec---CCCcEEeeeccCCCcEEEEEEECCC--cc--ccEEEEEEEEC----CeEEEEEEeC-Cc
Confidence 24699999 9999998763 25655444443221 13 48888999994 7788899995 34
Q ss_pred eeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCCceeeccccccCCCCcceeeEeC
Q 043310 186 TPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQPREIGSKFKELPDGYDINYVLD 265 (359)
Q Consensus 186 ~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~~~~l~~~~~~~~~g~D~~f~l~ 265 (359)
.||++|+||||+++. +.+.+++.....+ +| .++.+.. ... ..++|. ..+|.+|.-.
T Consensus 143 ~p~~~g~HpyF~v~d-----~~~~~v~g~~~~~--~d--~l~~~~~-~~~-~~~~~~-------------~~~D~vy~~~ 198 (270)
T 1jov_A 143 ESAQAALHTYFNIGD-----INQVEVQGLPETC--FN--SLNQQQE-NVP-SPRHIS-------------ENVDCIYSAE 198 (270)
T ss_dssp SCEEEEECCEEECSC-----GGGEEEESCCSEE--EE--TTTTEEE-ECC-SSBCCS-------------SCEEEEEECS
T ss_pred hhHhhhcccceecCC-----cceEEEECCCCcc--ee--ccCCccc-ccC-CcccCC-------------CCccceeCCC
Confidence 589999999999974 4566776554443 34 3554321 111 112221 2278888621
Q ss_pred CCCCCCcceEEEEEeCCCCcEEEEEe-cCCEEEEEcCCCCCccCCCCCccccCceEEEEccCCCCCCCCCCCCCceEECC
Q 043310 266 NPNPEHLKKVAVVSESVSGRKMELWT-NKPGVQFYTSNMLGKVMGKDGFVYSNYAGFCLETQGFPDSVNNPNFPSQVVNP 344 (359)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~g~~l~v~t-~~p~l~vyt~~~~~~~~~~~~~~~~~~~~iciEP~~~pda~n~~~~~~~~L~p 344 (359)
...++|.++..+++|+|.. +++.++||+|. ..... +.......+||||||.. ....|+|
T Consensus 199 -------~~~~~i~d~~~~~~i~v~~~~~~~~vvWnP~-~~~~~--d~~~~~~~~fvCvEp~~----------~~~~L~P 258 (270)
T 1jov_A 199 -------NMQNQILDKSFNRTIALHHHNASQFVLWNPW-HKKTS--GMSETGYQKMLCLETAR----------IHHLLEF 258 (270)
T ss_dssp -------SSEEEEEETTTTEEEEEEEESCSEEEEEECT-TSCCT--TCCTTGGGGEEEEEEEE----------EEEEECT
T ss_pred -------CCCEEEEECCCCcEEEEEEcCCCeEEEECCC-ccccc--ccccccCccEEEeCccc----------cceEECC
Confidence 1268899999999999976 57999999973 11101 11111125799999953 2468999
Q ss_pred CCEEEEEEEE
Q 043310 345 GETYNHVMVY 354 (359)
Q Consensus 345 Ge~~~~~~~y 354 (359)
||+++.++++
T Consensus 259 Ge~~~~~~~i 268 (270)
T 1jov_A 259 GESLSVEISL 268 (270)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9998776655
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.87 E-value=8.3e-21 Score=184.02 Aligned_cols=275 Identities=13% Similarity=0.128 Sum_probs=177.7
Q ss_pred CCceeEEEEEEeC-CEEEEEe-ccCcEEEEEEeeCCCCceeeEEecCCCc-cccccC-----------CC--cccceEee
Q 043310 28 SCEAVGVYKLKRG-DLSLKFT-NYGATMLSAVIPDKNGKLADIVLGFDSV-KDYKTD-----------NT--YFGAIVGR 91 (359)
Q Consensus 28 ~~~~~~~~~L~n~-~~~v~i~-~~Ga~i~sl~~~~~~G~~~dvl~g~~~~-~~y~~~-----------~~--~~G~~l~P 91 (359)
.+..+..++|+|+ +++++|. .+|+.|.++.. +| +++.| .+. +.+... .. .++. +++
T Consensus 44 ~~~G~~~l~i~ng~gl~~~VlP~rG~dI~~~~~---~g--~~l~w--~s~~~~~~~P~~~~~~~~~g~~~l~~f~g-~~~ 115 (384)
T 3ty1_A 44 KQEGSKILTIHSKDGLTITLSPTRGMNLLRIEG---FG--SRMGW--DSPVKEVVNPAFINLESRNGLGWLEGFNE-MMV 115 (384)
T ss_dssp GGTTCEEEEEEESSSCEEEEEGGGTTEEEEEEE---TT--EEECC--CCSCCSCCCGGGCCTTHHHHTGGGGTCCC-SEE
T ss_pred CccCeEEEEEECCCccEEEEecccCCcceeEEE---CC--EEeee--cCCcccCcCccccccccCCCCchhhcCCe-eEe
Confidence 3456788999998 8999996 89999999998 46 67765 222 222110 00 0111 122
Q ss_pred CCCccCCCE-EEECCEEEEccCCCCCCCCCCCCCCCCccc-----eEEEEeeeccEEEEEEEcCC-CCCCCCeeEEEEEE
Q 043310 92 VANRISRAQ-FTLNGTRYQLINNDGDNMLHGGPRGFSEVI-----WKVKSHEVNSHITFTYNSLE-GEQGFPGDLAVSVT 164 (359)
Q Consensus 92 ~anRi~~g~-f~~~G~~y~l~~N~~~~~lHG~~~g~~~~~-----w~v~~~~~~~~v~l~~~~~~-~~~gyP~~~~~~vt 164 (359)
-||-...|. -..+|+.| +|||.++ ..+ |++.+. +...|+++..... ...||||.++.+++
T Consensus 116 ~cGl~~~G~P~~~~G~~~---------~LHG~~~---~~pa~~~~~~~~~~-~~~~i~l~g~~~~~~~~G~~~~l~~~i~ 182 (384)
T 3ty1_A 116 RCGYEWTGHPVTADGQIY---------TLHGKAG---NTPASLVEVEVADS-APYEIRIRGLVKESTFKKADLQTLTELR 182 (384)
T ss_dssp EEEESCCSSCEEETTEEE---------CTTCSGG---GSCCSEEEEEEESS-TTCCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred eccCcccCCCCCcCCccc---------ccccccc---CCCcceeEEEecCC-CceEEEEEEEEEEeeeccCCEEEEEEEE
Confidence 233222221 13456555 5699998 788 554432 2467888777653 35789999999999
Q ss_pred EEEeCCCeEEEEEEEEeC-CCceeEeecccceeecCCCCCCCeeceEEEEECceEEeeCCCCCCCCccccCCCCCcCCCC
Q 043310 165 YMFVGENNLVVKMKAKPL-EKATPVNLALHTYWNLGGHSSGDIFSHKLQLFGSHVTPVNDRLIPTGKITPVTGTPYDFLQ 243 (359)
Q Consensus 165 y~L~~~~~L~i~~~~~n~-~~~~p~~lg~HpYFnl~~~~~~~~~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~df~~ 243 (359)
|+|. +++|+|+++++|. +++||+.+++||||..+.. .++.+|.+++.+.++.++. + .++. .+++.
T Consensus 183 ~~l~-~~~l~i~~~VtN~g~~p~P~~~~~H~nfg~Pll----~~g~rl~~p~~~~~p~~~~--~------~~~l-~~~~~ 248 (384)
T 3ty1_A 183 YVPG-SNSFSLHDVLTNHADYPHDYQIIYHSNFGTPIL----EEGARFLAPISSISPFNDY--A------KSGL-KTWQT 248 (384)
T ss_dssp ECTT-CSEEEEEEEEEECSSSCEEEEEEEEEEECTTTC----CTTCEEECCEEEEEESSGG--G------GGGS-TTTTB
T ss_pred EEeC-CCEEEEEEEEEECCCCCCchheecccccCCCcc----CCCcEEEeccceecccccc--c------cccc-cchhh
Confidence 9997 6899999999999 9999999999999987642 2367888888776654421 0 0100 12221
Q ss_pred c-eeeccccccCCCCcc-eeeEeCCCC-CCCcceEEEEEeCCCCcEEEEEe---cCCEEEEEcCCCCCccCCCCCccccC
Q 043310 244 P-REIGSKFKELPDGYD-INYVLDNPN-PEHLKKVAVVSESVSGRKMELWT---NKPGVQFYTSNMLGKVMGKDGFVYSN 317 (359)
Q Consensus 244 ~-~~l~~~~~~~~~g~D-~~f~l~~~~-~~~~~~~~~l~~~~~g~~l~v~t---~~p~l~vyt~~~~~~~~~~~~~~~~~ 317 (359)
. .+. .+++ .+|..+-.. .++ ...+.|.++..|+.+.+.. ++|++++|+..... + .
T Consensus 249 ~~~p~--------~~~~E~vf~~d~~~d~~G-~~~~~l~n~~~g~~~~l~f~~~~fP~l~~W~~~~~~------~----~ 309 (384)
T 3ty1_A 249 YQGPT--------KDFDEMVFNIQPLADENH-QTLAAVVNKAGDKGASIQFDTRQLPVLTLWKNTDTV------K----Q 309 (384)
T ss_dssp CCCCC--------TTCCCEEEEEEECCCTTS-EEEEEEECSSSSCEEEEEEETTTSCEEEEEEEESCT------T----T
T ss_pred ccCCC--------CCCCceEEEEeccccCCC-ceEEEEEecCCCcEEEEEEchHHCCHhHhhcccCCC------C----C
Confidence 1 111 1132 454322110 112 3468899998898888854 36999999863111 0 1
Q ss_pred ceEEEEccC-CCCCCCC---CCCCCceEECCCCEEEEEEEEEEE
Q 043310 318 YAGFCLETQ-GFPDSVN---NPNFPSQVVNPGETYNHVMVYRFT 357 (359)
Q Consensus 318 ~~~iciEP~-~~pda~n---~~~~~~~~L~pGe~~~~~~~y~f~ 357 (359)
.-.+||||+ ++||+.+ ... .++.|+|||+++.++++.+.
T Consensus 310 gyvl~LEP~T~~p~~~~~~~~~g-~l~~L~PGes~~~~~~i~v~ 352 (384)
T 3ty1_A 310 GYVTGIEPGTSYAYPVTIERKQK-RVKQLQPGASAQFDLTYTLL 352 (384)
T ss_dssp CEEEEEEEESSCSSCHHHHHHTT-CCEEECTTCEEEEEEEEEEE
T ss_pred ccEEEEeCccCCCchhHHHHhCC-CeEEECCCCEEEEEEEEEEe
Confidence 213599999 8899844 333 68999999999999988874
No 17
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=92.36 E-value=2.5 Score=38.21 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=24.9
Q ss_pred EEEEEEeCCEEEEEeccCcEEEEEEee
Q 043310 33 GVYKLKRGDLSLKFTNYGATMLSAVIP 59 (359)
Q Consensus 33 ~~~~L~n~~~~v~i~~~Ga~i~sl~~~ 59 (359)
+.++|+|+.++++|.+.||.|.++.++
T Consensus 4 ~~i~v~td~l~~~is~~GG~I~~~~Lk 30 (280)
T 3bs6_A 4 KLISVKTDVLDLTINTRGGDVEQALLP 30 (280)
T ss_dssp CEEEEECSSCEEEEETBTTEEEEEEEE
T ss_pred CEEEEECCcEEEEEECCCCeEeeeEcC
Confidence 468999999999999999999999884
No 18
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=90.03 E-value=4.4 Score=37.55 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=25.0
Q ss_pred EEEEEEeCCEEEEEeccCcEEEEEEee
Q 043310 33 GVYKLKRGDLSLKFTNYGATMLSAVIP 59 (359)
Q Consensus 33 ~~~~L~n~~~~v~i~~~Ga~i~sl~~~ 59 (359)
..++|+|+.++++|.+.||.|.++.++
T Consensus 35 ~~i~V~td~l~~~is~~GG~I~~~~Lk 61 (330)
T 3blc_A 35 KLISVKTDVLDLTINTRGGDVEQALLP 61 (330)
T ss_dssp CEEEEECSSCEEEEETBTCCEEEEEEE
T ss_pred CEEEEECCcEEEEEECCCCEEeEEECC
Confidence 469999999999999999999999884
No 19
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=35.55 E-value=80 Score=24.50 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=23.4
Q ss_pred eeEEEEEEEEEeCCCeEEEEEEEEeC-CCceeE
Q 043310 157 GDLAVSVTYMFVGENNLVVKMKAKPL-EKATPV 188 (359)
Q Consensus 157 ~~~~~~vty~L~~~~~L~i~~~~~n~-~~~~p~ 188 (359)
+.+.++|++.-. ++.+.+.++++|. +.+..+
T Consensus 5 ~~l~~~v~~~~~-g~~v~~~ltv~N~s~~~v~l 36 (120)
T 3isy_A 5 QEVVLSIDAIQE-PEQIKFNMSLKNQSERAIEF 36 (120)
T ss_dssp CSEEEEEEEEEC-SSCEEEEEEEEECSSSCEEE
T ss_pred cEEEEEEeeccC-CCeEEEEEEEEcCCCCcEEE
Confidence 468888888876 5799999999995 444443
No 20
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=33.38 E-value=36 Score=23.33 Aligned_cols=18 Identities=28% Similarity=0.523 Sum_probs=14.1
Q ss_pred EEEEEEeCCCeEEEEEEEE
Q 043310 162 SVTYMFVGENNLVVKMKAK 180 (359)
Q Consensus 162 ~vty~L~~~~~L~i~~~~~ 180 (359)
+|+|+|+ +|.|.|.++..
T Consensus 32 tvtytld-gndleiritgv 49 (85)
T 2kl8_A 32 TVTYTLD-GNDLEIRITGV 49 (85)
T ss_dssp EEEEEEC-SSCEEEEEESC
T ss_pred eEEEEec-CCeeEEEEecC
Confidence 7899998 58888877653
No 21
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=24.53 E-value=2.6e+02 Score=28.16 Aligned_cols=53 Identities=8% Similarity=-0.029 Sum_probs=36.8
Q ss_pred CCccceEEEEeeeccEEEEEEEcCCCCCCCCeeEEEEEEEEEeCCCeEEEEEEEEeC
Q 043310 126 FSEVIWKVKSHEVNSHITFTYNSLEGEQGFPGDLAVSVTYMFVGENNLVVKMKAKPL 182 (359)
Q Consensus 126 ~~~~~w~v~~~~~~~~v~l~~~~~~~~~gyP~~~~~~vty~L~~~~~L~i~~~~~n~ 182 (359)
|..+++++... ...++|+..-.-.. +.+....++=+|+|. .++|.|+|+++|.
T Consensus 513 f~~~~~~~~~~--~~~~~~~~~g~~~~-~~~~~~~l~K~~~~~-~~~~~v~y~~~~~ 565 (659)
T 1k1x_A 513 FVNQPYEYEMI--ENGVKLWREGGVYA-EEKIPARVEKKIELT-EDGFIAKYRVLLE 565 (659)
T ss_dssp CSSSCCEEEEE--TTEEEEEEEEEEES-SSEEEEEEEEEEEEE-TTEEEEEEEEEES
T ss_pred cccCccccccc--cceEEEEEeccccc-CCCcceEEEEEEEEc-CCEEEEEEEEeeC
Confidence 55778887773 56788877632111 123456677789998 4899999999994
No 22
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A
Probab=23.70 E-value=1.8e+02 Score=23.20 Aligned_cols=43 Identities=7% Similarity=0.041 Sum_probs=28.5
Q ss_pred CeeEEEEEE-EEEeCCCeEEEEEEEEeC-CCceeEeec-----ccceeec
Q 043310 156 PGDLAVSVT-YMFVGENNLVVKMKAKPL-EKATPVNLA-----LHTYWNL 198 (359)
Q Consensus 156 P~~~~~~vt-y~L~~~~~L~i~~~~~n~-~~~~p~~lg-----~HpYFnl 198 (359)
||+..+... ..|.++.+-++++.++.. ++++.+.++ +|.|+.-
T Consensus 42 ~w~vql~q~gi~L~~G~tY~lsF~A~as~~r~i~v~i~~~~~~y~~y~~~ 91 (149)
T 1gu3_A 42 QYGVGVVLNGVAIEEGTTYTLRYTATASTDVTVRALVGQNGAPYGTVLDT 91 (149)
T ss_dssp TTSSEEEEEEECBCTTCEEEEEEEEEESSCEECEEEEEESSTTCCEEEEE
T ss_pred CEEEEEEeCCEEEcCCCEEEEEEEEEeCCCcEEEEEEecCCCChhhheee
Confidence 567777664 777766678888888874 555556554 5667653
No 23
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=22.31 E-value=77 Score=24.48 Aligned_cols=18 Identities=33% Similarity=0.540 Sum_probs=15.0
Q ss_pred EEEEEEeCCCeEEEEEEEE
Q 043310 162 SVTYMFVGENNLVVKMKAK 180 (359)
Q Consensus 162 ~vty~L~~~~~L~i~~~~~ 180 (359)
+|+|+|+ +|.|.|.++..
T Consensus 33 tvtytl~-gn~l~i~itgv 50 (170)
T 4hhu_A 33 TVTYTLS-GNRLVIVITGV 50 (170)
T ss_dssp EEEEEEE-TTEEEEEEESC
T ss_pred eEEEEEe-CCEEEEEEeCC
Confidence 7999999 69999887654
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=21.14 E-value=77 Score=24.48 Aligned_cols=18 Identities=33% Similarity=0.540 Sum_probs=14.7
Q ss_pred EEEEEEeCCCeEEEEEEEE
Q 043310 162 SVTYMFVGENNLVVKMKAK 180 (359)
Q Consensus 162 ~vty~L~~~~~L~i~~~~~ 180 (359)
+|+|+|+ +|.|.|.++..
T Consensus 114 tvtytl~-gn~l~i~itgv 131 (170)
T 4hhu_A 114 TVTYTLS-GNRLVIVITGV 131 (170)
T ss_dssp EEEEEEC-SSEEEEEEESC
T ss_pred eEEEEEe-CCEEEEEEeCC
Confidence 7999998 68998887653
No 25
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=20.54 E-value=7.9e+02 Score=26.17 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=26.6
Q ss_pred EEEEEeCCEEEEEeccCcEEEEEEeeCCCCceeeEEe
Q 043310 34 VYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVL 70 (359)
Q Consensus 34 ~~~L~n~~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~ 70 (359)
.+++++++.++.+...-|.|.|+.+ +| +++|.
T Consensus 755 ~~~v~~~~~~~~f~k~~G~l~s~~~---~g--~~~l~ 786 (1032)
T 3oba_A 755 YVSVESSGLHFILDKLLGKIESLKV---KG--KEISS 786 (1032)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEEE---TT--EEEEE
T ss_pred EEEEEECCEEEEEECCcceEEEEEE---CC--EEEec
Confidence 5778888999999988889999998 56 67775
No 26
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=20.49 E-value=3.6e+02 Score=28.82 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=25.6
Q ss_pred EEEEEeCCEEEEEeccCcEEEEEEeeCCCCceeeEEe
Q 043310 34 VYKLKRGDLSLKFTNYGATMLSAVIPDKNGKLADIVL 70 (359)
Q Consensus 34 ~~~L~n~~~~v~i~~~Ga~i~sl~~~~~~G~~~dvl~ 70 (359)
.++++.++.++.+...-|.|.|+.. +| +++|.
T Consensus 746 ~~~v~~~~~~~~f~~~~G~l~s~~~---~g--~~~l~ 777 (1023)
T 1jz7_A 746 DFCIELGNKRWQFNRQSGFLSQMWI---GD--KKQLL 777 (1023)
T ss_dssp EEEEEETTEEEEEETTTCSEEEEEE---TT--EECEE
T ss_pred eEEEEECCEEEEEECCcceEEEEEE---CC--EEeec
Confidence 5678888999999877788999988 46 56664
Done!