BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043316
(1031 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 251/532 (47%), Gaps = 30/532 (5%)
Query: 94 DFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRM 153
D S +L +L++S N IP + + S L+ LD+ N+LSG + I T L++
Sbjct: 190 DVDVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKL 248
Query: 154 LYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSL-GXXXXXXXXXXXXXXXFGS 212
L N G IP L + L+L N F+G IP L G +G+
Sbjct: 249 LNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 306
Query: 213 IPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLK-S 270
+P G+ + L L LS N G +P +L + L +L L N G +P + NL S
Sbjct: 307 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 366
Query: 271 LFELDLSENQLFGSIPLSFSNLSSLTLMSLF--NNSLSGSIPPTQGNLEALSELGLYINQ 328
L LDLS N G I + TL L+ NN +G IPPT N L L L N
Sbjct: 367 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 426
Query: 329 LDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL 388
L G IP S+G+LS LR L L+ N G +P E+ Y+K+L L L N L+G IP + N
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 486
Query: 389 TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNN 448
T L +++ N L G IPK L +L L+ + N+ G + GD +L +LDL+ N
Sbjct: 487 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL 546
Query: 449 LYGEI-SFNWRNFPKLGT-FNASMNNIY--------------------GSIPPEIGDSSK 486
G I + ++ K+ F A +Y G ++ S
Sbjct: 547 FNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLST 606
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
+++S G F+ S+ L ++ N LSG +P E GS+ L L+L N +S
Sbjct: 607 RNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDIS 666
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
SIP +G+L L+ L+LS+N+ + +IP L L+E+DLS+N L G IP
Sbjct: 667 GSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 184/702 (26%), Positives = 270/702 (38%), Gaps = 164/702 (23%)
Query: 125 SKLRALDLGNNQLSGVI------------------------PQEIG---HLTCLRMLYFD 157
+ L +LDL N LSG + P ++ L L +L
Sbjct: 97 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 156
Query: 158 VNHLHG-------------------------SIPLEIGKLSLINVLTLCHNNFSGRIPPS 192
N + G S +++ + + L + NNFS I P
Sbjct: 157 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI-PF 215
Query: 193 LGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYL 252
LG G + L +L++S NQ G IP L +L L L
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP--PLPLKSLQYLSL 273
Query: 253 YKNSLFGFIPSVI-GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIP- 310
+N G IP + G +L LDLS N +G++P F + S L ++L +N+ SG +P
Sbjct: 274 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 333
Query: 311 PTQGNLEALSELGLYINQLDGVIPPSIGNLS---------------------------SL 343
T + L L L N+ G +P S+ NLS +L
Sbjct: 334 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 393
Query: 344 RTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403
+ LYL +NGF G +P + L L L N+LSG IP S+G+L+KL + + N L G
Sbjct: 394 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 453
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKL 463
IP+ + +LE L + N+L G++ + NL ++ LS N L GEI L
Sbjct: 454 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 513
Query: 464 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV-------------------- 503
S N+ G+IP E+GD L LDL++N G IP
Sbjct: 514 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 573
Query: 504 --------------------------QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQY 537
Q +L + N + G F + + +
Sbjct: 574 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 633
Query: 538 LDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEI 597
LD+S N LS IPK +G++ L LNL +N + IP E L L+ LDLS N L G I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 598 PPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKD---G 654
P + + L+ ID++ N L GPIP F+
Sbjct: 694 PQAM------------------------SALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 729
Query: 655 LMEGNKGLCGNFKALPSC-----DAFMSHEQTSRKKWVVIVF 691
N GLCG LP C D + H+++ ++ + F
Sbjct: 730 KFLNNPGLCG--YPLPRCDPSNADGYAHHQRSHGRRLENLYF 769
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 214/462 (46%), Gaps = 48/462 (10%)
Query: 90 GTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQE-IGHL 148
G DF + L L+LS N YG +PP + S L +L L +N SG +P + + +
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 149 TCLRMLYFDVNHLHGSIPLEIGKLSL-INVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXX 207
L++L N G +P + LS + L L NNFSG I
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI------------------ 381
Query: 208 XXFGSIPNVMGN-LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIG 266
+PN+ N N+L L L N G IP +L+N S L L+L N L G IPS +G
Sbjct: 382 -----LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 436
Query: 267 NLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYI 326
+L L +L L N L G IP + +L + L N L+G IP N L+ + L
Sbjct: 437 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 496
Query: 327 NQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG 386
N+L G IP IG L +L L L +N F G +P E+G +SL L+L N +G IP ++
Sbjct: 497 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Query: 387 NLTKLVLVNMCENHLFGLIPKS--------------FRNLTSLERLRF---NQNNLFGKV 429
+ + N + I F+ + S + R N N+ +V
Sbjct: 557 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 616
Query: 430 Y-----EAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS 484
Y F ++ ++ FLD+S N L G I + P L N N+I GSIP E+GD
Sbjct: 617 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 676
Query: 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVP 526
L +LDLSSN + G+IP L L ++ L+ N LSG +P
Sbjct: 677 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 251/532 (47%), Gaps = 30/532 (5%)
Query: 94 DFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRM 153
D S +L +L++S N IP + + S L+ LD+ N+LSG + I T L++
Sbjct: 193 DVDVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKL 251
Query: 154 LYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSL-GXXXXXXXXXXXXXXXFGS 212
L N G IP L + L+L N F+G IP L G +G+
Sbjct: 252 LNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309
Query: 213 IPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLK-S 270
+P G+ + L L LS N G +P +L + L +L L N G +P + NL S
Sbjct: 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 369
Query: 271 LFELDLSENQLFGSIPLSFSNLSSLTLMSLF--NNSLSGSIPPTQGNLEALSELGLYINQ 328
L LDLS N G I + TL L+ NN +G IPPT N L L L N
Sbjct: 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429
Query: 329 LDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL 388
L G IP S+G+LS LR L L+ N G +P E+ Y+K+L L L N L+G IP + N
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489
Query: 389 TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNN 448
T L +++ N L G IPK L +L L+ + N+ G + GD +L +LDL+ N
Sbjct: 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL 549
Query: 449 LYGEI-SFNWRNFPKLGT-FNASMNNIY--------------------GSIPPEIGDSSK 486
G I + ++ K+ F A +Y G ++ S
Sbjct: 550 FNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLST 609
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
+++S G F+ S+ L ++ N LSG +P E GS+ L L+L N +S
Sbjct: 610 RNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDIS 669
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
SIP +G+L L+ L+LS+N+ + +IP L L+E+DLS+N L G IP
Sbjct: 670 GSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 215/462 (46%), Gaps = 48/462 (10%)
Query: 90 GTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQE-IGHL 148
G DF + L L+LS N YG +PP + S L +L L +N SG +P + + +
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 149 TCLRMLYFDVNHLHGSIPLEIGKLSL-INVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXX 207
L++L N G +P + LS + L L NNFSG I
Sbjct: 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI------------------ 384
Query: 208 XXFGSIPNVMGN-LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIG 266
+PN+ N N+L L L N G IP +L+N S L L+L N L G IPS +G
Sbjct: 385 -----LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 439
Query: 267 NLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYI 326
+L L +L L N L G IP + +L + L N L+G IP N L+ + L
Sbjct: 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 499
Query: 327 NQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG 386
N+L G IP IG L +L L L +N F G +P E+G +SL L+L N +G IP ++
Sbjct: 500 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Query: 387 NLTKLVLVNMCENHLFGLIPKS--------------FRNLTS--LERLRF-NQNNLFGKV 429
+ + N + I F+ + S L RL N N+ +V
Sbjct: 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619
Query: 430 Y-----EAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS 484
Y F ++ ++ FLD+S N L G I + P L N N+I GSIP E+GD
Sbjct: 620 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 679
Query: 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVP 526
L +LDLSSN + G+IP L L ++ L+ N LSG +P
Sbjct: 680 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 182/679 (26%), Positives = 261/679 (38%), Gaps = 159/679 (23%)
Query: 125 SKLRALDLGNNQLSGVI------------------------PQEIG---HLTCLRMLYFD 157
+ L +LDL N LSG + P ++ L L +L
Sbjct: 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159
Query: 158 VNHLHG-------------------------SIPLEIGKLSLINVLTLCHNNFSGRIPPS 192
N + G S +++ + + L + NNFS I P
Sbjct: 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI-PF 218
Query: 193 LGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYL 252
LG G + L +L++S NQ G IP L +L L L
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP--PLPLKSLQYLSL 276
Query: 253 YKNSLFGFIPSVI-GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIP- 310
+N G IP + G +L LDLS N +G++P F + S L ++L +N+ SG +P
Sbjct: 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336
Query: 311 PTQGNLEALSELGLYINQLDGVIPPSIGNLS---------------------------SL 343
T + L L L N+ G +P S+ NLS +L
Sbjct: 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396
Query: 344 RTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG 403
+ LYL +NGF G +P + L L L N+LSG IP S+G+L+KL + + N L G
Sbjct: 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 456
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKL 463
IP+ + +LE L + N+L G++ + NL ++ LS N L GEI L
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 516
Query: 464 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV-------------------- 503
S N+ G+IP E+GD L LDL++N G IP
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576
Query: 504 --------------------------QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQY 537
Q +L + N + G F + + +
Sbjct: 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636
Query: 538 LDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEI 597
LD+S N LS IPK +G++ L LNL +N + IP E L L+ LDLS N L G I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 598 PPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKD---G 654
P + + L+ ID++ N L GPIP F+
Sbjct: 697 PQAM------------------------SALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 732
Query: 655 LMEGNKGLCGNFKALPSCD 673
N GLCG LP CD
Sbjct: 733 KFLNNPGLCG--YPLPRCD 749
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 143/291 (49%), Gaps = 12/291 (4%)
Query: 748 KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFL 807
+F E+ A D+F K +G+G G VYK L G + AVK+ + + +F
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERX---QGGELQFQ 83
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMN 866
EV ++ HRN+++ GFC +V Y+ GS+ + L++ ++ W +R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-WTAF 925
+ G A L+YLH C P I+H D+ + N+LLD E EA V DFG+AK ++ + A
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985
GT G+ APE +++EK DV +GV+ LE+I G D ++ +
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 986 LDHRLPTPSRDV-------MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
L + DV +++ +++VA+LC SP RP M +V +L
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 145 bits (365), Expect = 1e-34, Method: Composition-based stats.
Identities = 88/291 (30%), Positives = 142/291 (48%), Gaps = 12/291 (4%)
Query: 748 KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFL 807
+F E+ A D+F K +G+G G VYK L G + AVK+ + + +F
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEE---RTQGGELQFQ 75
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-FGWNQRMN 866
EV ++ HRN+++ GFC +V Y+ GS+ + L++ ++ W +R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN-WTAF 925
+ G A L+YLH C P I+H D+ + N+LLD E EA V DFG+AK ++ + A
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985
G G+ APE +++EK DV +GV+ LE+I G D ++ +
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 986 LDHRLPTPSRDV-------MDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
L + DV +++ +++VA+LC SP RP M +V +L
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 14/287 (4%)
Query: 743 LNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMAD 802
L F G +++ D K IG G G+V++AE G AVK Q E +
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN 79
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
EFL EV + +RH NI+ F G + + IV+EYL RGSL +L A ++
Sbjct: 80 --EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
+R+++ VA ++YLH+ PPIVH D+ S N+L+D ++ V DFG+++
Sbjct: 138 RRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS 196
Query: 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI 982
AGT + APE+ + EK DV+SFGV+ E+ P ++ + ++ +
Sbjct: 197 KXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP-----AQVVAAV 251
Query: 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RL P R++ ++ +I+E C P RP+ + +LL
Sbjct: 252 GFKC-KRLEIP-RNLNPQVAAIIEG---CWTNEPWKRPSFATIMDLL 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 14/287 (4%)
Query: 743 LNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMAD 802
L F G +++ D K IG G G+V++AE G AVK Q E +
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN 79
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
EFL EV + +RH NI+ F G + + IV+EYL RGSL +L A ++
Sbjct: 80 --EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
+R+++ VA ++YLH+ PPIVH ++ S N+L+D ++ V DFG+++ +
Sbjct: 138 RRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196
Query: 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI 982
+ AGT + APE+ + EK DV+SFGV+ E+ P ++ + ++ +
Sbjct: 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP-----AQVVAAV 251
Query: 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
RL P R++ ++ +I+E C P RP+ + +LL
Sbjct: 252 GFKC-KRLEIP-RNLNPQVAAIIEG---CWTNEPWKRPSFATIMDLL 293
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 141/309 (45%), Gaps = 20/309 (6%)
Query: 728 KATDDFGDPFGFSSVLNFNG-KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIF 786
KAT+ D S ++ F + ++ +A ++F K+ IG G G VYK L G
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 787 AVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL 846
A+K+ + +EF E+ L+ RH +++ GFC ++ +Y++ G+L
Sbjct: 67 ALKRRTPE----SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 847 TTIL-KDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH 905
L D W QR+ + G A L YLH I+H D+ S N+LLD
Sbjct: 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPK 179
Query: 906 VSDFGIAKFLNP--HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNH 963
++DFGI+K + GT GY PE R TEK DV+SFGV+ EV+
Sbjct: 180 ITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
Query: 964 ------PRDYVS-TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESP 1016
PR+ V+ ++ S+ ++ Q +D L R + L + A+ CL S
Sbjct: 240 AIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP--ESLRKFGDTAVKCLALSS 297
Query: 1017 EARPTMKKV 1025
E RP+M V
Sbjct: 298 EDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 141/309 (45%), Gaps = 20/309 (6%)
Query: 728 KATDDFGDPFGFSSVLNFNG-KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIF 786
KAT+ D S ++ F + ++ +A ++F K+ IG G G VYK L G
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 787 AVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL 846
A+K+ + +EF E+ L+ RH +++ GFC ++ +Y++ G+L
Sbjct: 67 ALKRRTPE----SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 847 TTIL-KDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH 905
L D W QR+ + G A L YLH I+H D+ S N+LLD
Sbjct: 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPK 179
Query: 906 VSDFGIAKFLNP--HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNH 963
++DFGI+K + GT GY PE R TEK DV+SFGV+ EV+
Sbjct: 180 ITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
Query: 964 ------PRDYVS-TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESP 1016
PR+ V+ ++ S+ ++ Q +D L R + L + A+ CL S
Sbjct: 240 AIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP--ESLRKFGDTAVKCLALSS 297
Query: 1017 EARPTMKKV 1025
E RP+M V
Sbjct: 298 EDRPSMGDV 306
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY RG + K+ +F + I +ANA
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGE---VYKELQKLSKFDEQRTATYITELANA 125
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 239 RDLISRL----------LKHNPSQRPMLREV 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 100 bits (250), Expect = 3e-21, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 178
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 237 RDLISRLLK----------HNPSQRPMLREV 257
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole Inhibitor
Length = 268
Score = 100 bits (249), Expect = 4e-21, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS A GT Y P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 175
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 234 RDLISRLLK----------HNPSQRPMLREV 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By A
Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine Aurora
Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 100 bits (249), Expect = 4e-21, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 67
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 124
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 125 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 179
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 237
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 238 RDLISRLLK----------HNPSQRPMLREV 258
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 175
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 234 RDLISRL----------LKHNPSQRPMLREV 254
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
Length = 267
Score = 100 bits (249), Expect = 5e-21, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 62
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 119
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 120 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 174
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 232
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 233 RDLISRLLK----------HNPSQRPMLREV 253
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 100 bits (248), Expect = 5e-21, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPP 175
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 234 RDLISRLLK----------HNPSQRPMLREV 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 178
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 237 RDLISRL----------LKHNPSQRPMLREV 257
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPP 175
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 234 RDLISRL----------LKHNPSQRPMLREV 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 89
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 147 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 201
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 260 RDLISRL----------LKHNPSQRPMLREV 280
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS A GT Y P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 178
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 237 RDLISRL----------LKHNPSQRPMLREV 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 175
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 234 RDLISRLLK----------HNPSQRPMLREV 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 239 RDLISRL----------LKHNPSQRPMLREV 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 99.8 bits (247), Expect = 7e-21, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 175
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 234 RDLISRLLK----------HNPSQRPMLREV 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 64
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + + SS T +GT Y P
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPP 176
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 235 RDLISRL----------LKHNPSQRPMLREV 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis Of
A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 64
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 176
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 235 RDLISRL----------LKHNPSQRPMLREV 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 239 RDLISRLLK----------HNPSQRPXLREV 259
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 80
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 138 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 192
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 250
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 251 RDLISRL----------LKHNPSQRPMLREV 271
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 180
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 239 RDLISRL----------LKHNPSQRPMLREV 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E I A+K F +QL ++ + + EV +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 60
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 117
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y P
Sbjct: 118 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 172
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 230
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 231 RDLISRLLK----------HNPSQRPMLREV 251
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY RG + K+ +F + I +ANA
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGE---VYKELQKLSKFDEQRTATYITELANA 125
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS GT Y P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPP 180
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 239 RDLISRL----------LKHNPSQRPMLREV 259
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor
Length = 272
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E +++FG + ++ SS T GT Y P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP 178
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 237 RDLISRLLK----------HNPSQRPMLREV 257
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 124/288 (43%), Gaps = 50/288 (17%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G VYK + + + AVKK + + + +F E+ + + +H N+++ G
Sbjct: 39 MGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
F S+ +V Y+ GSL L W+ R + +G AN +++LH +
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HH 154
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATE 944
+H DI S N+LLD A +SDFG+A+ + + GT Y APE A T
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITP 213
Query: 945 KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP------------- 991
K D++SFGV+ LE+I G D +HR P
Sbjct: 214 KSDIYSFGVVLLEIITGLPAVD--------------------EHREPQLLLDIKEEIEDE 253
Query: 992 -TPSRDVMDKLM---------SIMEVAILCLVESPEARPTMKKVCNLL 1029
D +DK M ++ VA CL E RP +KKV LL
Sbjct: 254 EKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 98.2 bits (243), Expect = 2e-20, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS GT Y P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 178
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 237 RDLISRLLK----------HNPSQRPMLREV 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
Length = 268
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ ++ +++ EY L T+ ++ +F + I +ANA
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS A GT Y P
Sbjct: 121 LSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 175
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQDTYKRISRVEFTFPDFVTEGA 233
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 234 RDLISRLLK----------HNPSQRPMLREV 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS GT Y P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 175
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 234 RDLISRLLK----------HNPSQRPMLREV 254
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 65
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E +++FG + ++ SS T GT Y P
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP 177
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 235
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 236 RDLISRL----------LKHNPSQRPMLREV 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 64
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS GT Y P
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPP 176
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 235 RDLISRL----------LKHNPSQRPMLREV 255
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 65
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS GT Y P
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 177
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 235
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 236 RDLISRL----------LKHNPSQRPMLREV 256
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 123/288 (42%), Gaps = 50/288 (17%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G VYK + + + AVKK + + + +F E+ + + +H N+++ G
Sbjct: 39 MGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
F S+ +V Y+ GSL L W+ R + +G AN +++LH +
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HH 154
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATE 944
+H DI S N+LLD A +SDFG+A+ + GT Y APE A T
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITP 213
Query: 945 KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP------------- 991
K D++SFGV+ LE+I G D +HR P
Sbjct: 214 KSDIYSFGVVLLEIITGLPAVD--------------------EHREPQLLLDIKEEIEDE 253
Query: 992 -TPSRDVMDKLM---------SIMEVAILCLVESPEARPTMKKVCNLL 1029
D +DK M ++ VA CL E RP +KKV LL
Sbjct: 254 EKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 123/288 (42%), Gaps = 50/288 (17%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G VYK + + + AVKK + + + +F E+ + + +H N+++ G
Sbjct: 33 MGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
F S+ +V Y+ GSL L W+ R + +G AN +++LH +
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HH 148
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATE 944
+H DI S N+LLD A +SDFG+A+ + GT Y APE A T
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITP 207
Query: 945 KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP------------- 991
K D++SFGV+ LE+I G D +HR P
Sbjct: 208 KSDIYSFGVVLLEIITGLPAVD--------------------EHREPQLLLDIKEEIEDE 247
Query: 992 -TPSRDVMDKLM---------SIMEVAILCLVESPEARPTMKKVCNLL 1029
D +DK M ++ VA CL E RP +KKV LL
Sbjct: 248 EKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 97.1 bits (240), Expect = 5e-20, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS GT Y P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPP 178
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L+ +P RP +++V
Sbjct: 237 RDLISRLLK----------HNPSQRPMLREV 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
A++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 89
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+RH NI++ +G+ +A +++ EY L T+ ++ +F + I +ANA
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
LSY H ++H DI +N+LL S E ++DFG + ++ SS GT Y P
Sbjct: 147 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPP 201
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ S GVL E + G P + + + I+ + + +
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RD++ +L L +P RP +++V
Sbjct: 260 RDLISRL----------LKHNPSQRPMLREV 280
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 30/308 (9%)
Query: 733 FGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELP----SGIIFAV 788
F DPF F +F E I + + IG G G V L I A+
Sbjct: 10 FIDPFTFEDPNEAVREFAKEIDISCVK---IEQVIGAGEFGEVCSGHLKLPGKREIFVAI 66
Query: 789 KKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTT 848
K S + D FL+E + + H N+I G + + I++E+++ GSL +
Sbjct: 67 KTLKSGYTEKQRRD---FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 849 ILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908
L+ + +F Q + +++G+A + YL VH D++++N+L++S VSD
Sbjct: 124 FLRQNDG--QFTVIQLVGMLRGIAAGMKYLADMNY---VHRDLAARNILVNSNLVCKVSD 178
Query: 909 FGIAKFLNPHSSNWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNH 963
FG+++FL +S+ T + G + APE + T DV S+G++ EV+
Sbjct: 179 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 964 PRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
+ TN ++I I Q D+RLP P MD ++ ++ + C + RP
Sbjct: 239 RPYWDMTN----QDVINAIEQ--DYRLPPP----MDCPSALHQLMLDCWQKDRNHRPKFG 288
Query: 1024 KVCNLLCK 1031
++ N L K
Sbjct: 289 QIVNTLDK 296
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With [7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 94.0 bits (232), Expect = 3e-19, Method: Composition-based stats.
Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 14/262 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALTE 815
++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQL--EKAGVEHQLRREVEIQSH 68
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+RH NI++ +G+ +A +++ EY L T+ ++ F + I +ANAL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
SY H ++H DI +N+LL S E ++DFG + ++ SS T GT Y PE
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 180
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ EK D+ S GVL E + G P + + + I+ + + +R
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPP--FEAHTYQETYRRISRVEFTFPDFVTEGAR 238
Query: 996 DVMDKLMSIMEVAILCLVESPE 1017
D++ +L+ L L E E
Sbjct: 239 DLISRLLKHNASQRLTLAEVLE 260
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.0 bits (232), Expect = 4e-19, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 131/275 (47%), Gaps = 30/275 (10%)
Query: 767 IGKGRQGSVYKAELPSG-----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
IG G G VYK L + + A+K + + D FL E + + H NI
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD---FLGEAGIMGQFSHHNI 108
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
I+ G S + I++EY++ G+L L++ EF Q + +++G+A + YL +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLAN- 165
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFG--YAAPEIA 937
VH D++++N+L++S VSDFG+++ L +P ++ +T G + APE
Sbjct: 166 --MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT-YTTSGGKIPIRWTAPEAI 222
Query: 938 HMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
+ T DV SFG++ EV+ G P +S + ++ IN RLPTP
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVMKAINDGF--RLPTP--- 272
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
MD +I ++ + C + RP + ++L K
Sbjct: 273 -MDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 141/286 (49%), Gaps = 33/286 (11%)
Query: 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVL 811
EE+I A +FGE + +GR + K E A+K + + EFL+E
Sbjct: 21 EEVIGA-GEFGE---VCRGRLKAPGKKES----CVAIKTLKGGYTERQ---RREFLSEAS 69
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
+ + H NII+ G +N+ I++E+++ G+L + L+ + +F Q + +++G+
Sbjct: 70 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--QFTVIQLVGMLRGI 127
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG- 930
A+ + YL VH D++++N+L++S VSDFG+++FL +SS+ T + G
Sbjct: 128 ASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGK 184
Query: 931 ----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985
+ APE + T D S+G++ EV+ G P +S ++I I Q
Sbjct: 185 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-----DVINAIEQ- 238
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
D+RLP P D S+ ++ + C + ARP +V + L K
Sbjct: 239 -DYRLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 279
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 94.0 bits (232), Expect = 4e-19, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 120/233 (51%), Gaps = 22/233 (9%)
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
EFL+E + + H NII+ G +N+ I++E+++ G+L + L+ + +F Q
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--QFTVIQL 118
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA 924
+ +++G+A+ + YL VH D++++N+L++S VSDFG+++FL +SS+ T
Sbjct: 119 VGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY 175
Query: 925 FAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
+ G + APE + T D S+G++ EV+ G P +S ++
Sbjct: 176 TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-----DV 230
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
I I Q D+RLP P D S+ ++ + C + ARP +V + L K
Sbjct: 231 INAIEQ--DYRLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 277
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 93.6 bits (231), Expect = 6e-19, Method: Composition-based stats.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 26/229 (11%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+DEF E + ++ H ++KF+G CS +IV+EY+ G L L+ E +
Sbjct: 47 EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP--S 104
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q + + V +++L +H D++++N L+D + VSDFG+ +++ +
Sbjct: 105 QLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYV--LDDQY 159
Query: 923 TAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
+ GT ++APE+ H + + K DV +FG+L EV G P D + TN S +
Sbjct: 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD-LYTN----SEV 214
Query: 979 ITEINQNLDHRLPTP--SRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ +++Q HRL P + D +I ++ C E PE RPT +++
Sbjct: 215 VLKVSQG--HRLYRPHLASD------TIYQIMYSCWHELPEKRPTFQQL 255
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 120/287 (41%), Gaps = 50/287 (17%)
Query: 768 GKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGF 827
G+G G VYK + + + AVKK + + + +F E+ + +H N+++ GF
Sbjct: 31 GEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 828 CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIV 887
S+ +V Y GSL L W+ R + +G AN +++LH + +
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN---HHI 146
Query: 888 HGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEK 945
H DI S N+LLD A +SDFG+A+ + + GT Y APE A T K
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPK 205
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP-------------- 991
D++SFGV+ LE+I G D +HR P
Sbjct: 206 SDIYSFGVVLLEIITGLPAVD--------------------EHREPQLLLDIKEEIEDEE 245
Query: 992 TPSRDVMDK---------LMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D +DK + + VA CL E RP +KKV LL
Sbjct: 246 KTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 14/262 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALTE 815
++DF +GKG+ G+VY A E S I A+K F +QL ++ + + EV +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQL--EKAGVEHQLRREVEIQSH 68
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+RH NI++ +G+ +A +++ EY L T+ ++ F + I +ANAL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
SY H ++H DI +N+LL S E ++DFG + ++ SS GT Y PE
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPE 180
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ EK D+ S GVL E + G P + + + I+ + + +R
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPP--FEAHTYQETYRRISRVEFTFPDFVTEGAR 238
Query: 996 DVMDKLMSIMEVAILCLVESPE 1017
D++ +L+ L L E E
Sbjct: 239 DLISRLLKHNASQRLTLAEVLE 260
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 31/284 (10%)
Query: 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVL 811
E +I A +FGE + GR K ELP A+K ++ + E +D FL E
Sbjct: 27 ERVIGA-GEFGE---VCSGRLKLPGKRELP----VAIKTL--KVGYTEKQRRD-FLGEAS 75
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
+ + H NII G + ++ IV+EY++ GSL T LK + +F Q + +++G+
Sbjct: 76 IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG--QFTVIQLVGMLRGI 133
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTF 929
+ + YL VH D++++N+L++S VSDFG+++ L +P ++ +T G
Sbjct: 134 SAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKI 189
Query: 930 G--YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987
+ APE + T DV S+G++ EV+ + TN ++I + +
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN----QDVIKAVEEG-- 243
Query: 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
+RLP+P MD ++ ++ + C + +RP ++ N+L K
Sbjct: 244 YRLPSP----MDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDK 283
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V + +LPS +V ++ + E +D FL E + + H NII+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRL 111
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+EY++ GSL + L+ A +F Q + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGT--FGYAAPEIAHMM 940
VH D++++N+L++S VSDFG+A+ L +P ++ +T G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR 225
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ T DV S+G++ EV+ G P +S ++I +++ +RLP P MD
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEG--YRLPPP----MD 274
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ ++ + C + RP +++ ++L K
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 90.5 bits (223), Expect = 4e-18, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)
Query: 755 IKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNE 809
I ++ D +KY IG+G G+VY A ++ +G A+++ N Q + ++ +NE
Sbjct: 12 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINE 67
Query: 810 VLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
+L + E ++ NI+ + ++V EYL GSLT ++ + + Q V +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCR 123
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
AL +LH + ++H DI S N+LL + ++DFG + P S + GT
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 180
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
+ APE+ K D+ S G++A+E+I+G P Y++ N
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNEN 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)
Query: 755 IKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNE 809
I ++ D +KY IG+G G+VY A ++ +G A+++ N Q + ++ +NE
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINE 68
Query: 810 VLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
+L + E ++ NI+ + ++V EYL GSLT ++ + + Q V +
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCR 124
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
AL +LH + ++H DI S N+LL + ++DFG + P S + GT
Sbjct: 125 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP 181
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
+ APE+ K D+ S G++A+E+I+G P Y++ N
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNEN 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)
Query: 755 IKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNE 809
I ++ D +KY IG+G G+VY A ++ +G A+++ N Q + ++ +NE
Sbjct: 12 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINE 67
Query: 810 VLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
+L + E ++ NI+ + ++V EYL GSLT ++ + + Q V +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCR 123
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
AL +LH + ++H DI S N+LL + ++DFG + P S + GT
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP 180
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
+ APE+ K D+ S G++A+E+I+G P Y++ N
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNEN 220
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 18/223 (8%)
Query: 754 IIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLN 808
II ++ D +KY IG+G G+VY A ++ +G A+++ N Q + ++ +N
Sbjct: 12 IIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIIN 67
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
E+L + E ++ NI+ + ++V EYL GSLT ++ + + Q V
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVC 123
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+ AL +LH + ++H +I S N+LL + ++DFG + P S + GT
Sbjct: 124 RECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 180
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
+ APE+ K D+ S G++A+E+I+G P Y++ N
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNEN 221
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 90.1 bits (222), Expect = 6e-18, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)
Query: 755 IKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNE 809
I ++ D +KY IG+G G+VY A ++ +G A+++ N Q + ++ +NE
Sbjct: 12 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINE 67
Query: 810 VLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
+L + E ++ NI+ + ++V EYL GSLT ++ + + Q V +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCR 123
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
AL +LH + ++H DI S N+LL + ++DFG + P S + GT
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTP 180
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
+ APE+ K D+ S G++A+E+I+G P Y++ N
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNEN 220
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp
From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 127/268 (47%), Gaps = 33/268 (12%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-----EMADQ-DEFLNEVLALTEIRHR 819
IGKG G V+K L + A+K S +L D EM ++ EF EV ++ + H
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
NI+K +G N +V E++ G L L D A W+ ++ ++ +A + Y+
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQ 139
Query: 880 HDCLPPIVHGDISSKNVLLDSEHE-----AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
+ PPIVH D+ S N+ L S E A V+DFG+++ + HS + G F + AP
Sbjct: 140 NQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-QSVHSV--SGLLGNFQWMAP 195
Query: 935 EI--AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
E A TEK D +SF ++ ++ G P D S F NMI E + PT
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-----EGLRPT 250
Query: 993 PSRDVMDKLMSIMEVAILCLVESPEARP 1020
D +L +++E LC P+ RP
Sbjct: 251 IPEDCPPRLRNVIE---LCWSGDPKKRP 275
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V + +LPS +V ++ + E +D FL E + + H NII+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRL 111
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+EY++ GSL + L+ A +F Q + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGF- 168
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGT--FGYAAPEIAHMM 940
VH D++++N+L++S VSDFG+++ L +P ++ +T G + +PE
Sbjct: 169 --VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR 225
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ T DV S+G++ EV+ G P +S ++I +++ +RLP P MD
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEG--YRLPPP----MD 274
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ ++ + C + RP +++ ++L K
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Phosphorylated,
Amp-pnp Bound
Length = 373
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 147/297 (49%), Gaps = 34/297 (11%)
Query: 751 YEEIIKAIDDFGEKY---------CIGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDE 799
YE+ + + +F ++ +G G G V + +LPS +V ++ + E
Sbjct: 28 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
+D FL E + + H NII+ G + ++ IV+EY++ GSL + L+ A +F
Sbjct: 88 KQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QF 144
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NP 917
Q + +++G+A+ + YL VH D++++N+L++S VSDFG+++ L +P
Sbjct: 145 TVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 918 HSSNWTAFAGT--FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSS 974
++ +T G + +PE + T DV S+G++ EV+ G P +S
Sbjct: 202 EAA-YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--- 257
Query: 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++I +++ +RLP P MD ++ ++ + C + RP +++ ++L K
Sbjct: 258 --DVIKAVDEG--YRLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 147/297 (49%), Gaps = 34/297 (11%)
Query: 751 YEEIIKAIDDFGEKY---------CIGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDE 799
YE+ + + +F ++ +G G G V + +LPS +V ++ + E
Sbjct: 28 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
+D FL E + + H NII+ G + ++ IV+EY++ GSL + L+ A +F
Sbjct: 88 KQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QF 144
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NP 917
Q + +++G+A+ + YL VH D++++N+L++S VSDFG+++ L +P
Sbjct: 145 TVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 918 HSSNWTAFAGT--FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSS 974
++ +T G + +PE + T DV S+G++ EV+ G P +S
Sbjct: 202 EAA-YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--- 257
Query: 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++I +++ +RLP P MD ++ ++ + C + RP +++ ++L K
Sbjct: 258 --DVIKAVDEG--YRLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii-
38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V + +LPS +V ++ + E +D FL E + + H NII+
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRL 99
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+EY++ GSL + L+ A +F Q + +++G+A+ + YL
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD---M 154
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGT--FGYAAPEIAHMM 940
VH D++++N+L++S VSDFG+++ L +P ++ +T G + +PE
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR 213
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ T DV S+G++ EV+ G P +S ++I +++ +RLP P MD
Sbjct: 214 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEG--YRLPPP----MD 262
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ ++ + C + RP +++ ++L K
Sbjct: 263 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 294
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 147/297 (49%), Gaps = 34/297 (11%)
Query: 751 YEEIIKAIDDFGEKY---------CIGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDE 799
YE+ + + +F ++ +G G G V + +LPS +V ++ + E
Sbjct: 26 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 85
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
+D FL E + + H NII+ G + ++ IV+EY++ GSL + L+ A +F
Sbjct: 86 KQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QF 142
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NP 917
Q + +++G+A+ + YL VH D++++N+L++S VSDFG+++ L +P
Sbjct: 143 TVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 199
Query: 918 HSSNWTAFAGT--FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSS 974
++ +T G + +PE + T DV S+G++ EV+ G P +S
Sbjct: 200 EAA-YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--- 255
Query: 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++I +++ +RLP P MD ++ ++ + C + RP +++ ++L K
Sbjct: 256 --DVIKAVDEG--YRLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V + +LPS +V ++ + E +D FL E + + H NII+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRL 111
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+EY++ GSL + L+ A +F Q + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGT--FGYAAPEIAHMM 940
VH D++++N+L++S VSDFG+++ L +P ++ +T G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR 225
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ T DV S+G++ EV+ G P +S ++I +++ +RLP P MD
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEG--YRLPPP----MD 274
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ ++ + C + RP +++ ++L K
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V + +LPS +V ++ + E +D FL E + + H NII+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRL 82
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+EY++ GSL + L+ A +F Q + +++G+A+ + YL
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD---M 137
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGT--FGYAAPEIAHMM 940
VH D++++N+L++S VSDFG+++ L +P ++ +T G + +PE
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR 196
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ T DV S+G++ EV+ G P +S ++I +++ +RLP P MD
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEG--YRLPPP----MD 245
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ ++ + C + RP +++ ++L K
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V + +LPS +V ++ + E +D FL E + + H NII+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRL 111
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+EY++ GSL + L+ A +F Q + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGT--FGYAAPEIAHMM 940
VH D++++N+L++S VSDFG+++ L +P ++ +T G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR 225
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ T DV S+G++ EV+ G P +S ++I +++ +RLP P MD
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEG--YRLPPP----MD 274
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ ++ + C + RP +++ ++L K
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 767 IGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG G G V L I A+K S + D FL+E + + H N+I
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD---FLSEASIMGQFDHPNVI 71
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
G + + I++E+++ GSL + L+ + +F Q + +++G+A + YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLAD-- 127
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-----YAAPEIA 937
VH ++++N+L++S VSDFG+++FL +S+ T + G + APE
Sbjct: 128 -MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
+ T DV S+G++ EV+ + TN ++I I Q D+RLP P
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN----QDVINAIEQ--DYRLPPP---- 236
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
MD ++ ++ + C + RP ++ N L K
Sbjct: 237 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 270
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 123/265 (46%), Gaps = 27/265 (10%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKF---NSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IGKG G V+K L + A+K +S+ + + EF EV ++ + H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
K +G N +V E++ G L L D A W+ ++ ++ +A + Y+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQNQN 142
Query: 883 LPPIVHGDISSKNVLLDSEHE-----AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI- 936
PPIVH D+ S N+ L S E A V+DFG ++ + HS + G F + APE
Sbjct: 143 -PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-QSVHSV--SGLLGNFQWMAPETI 198
Query: 937 -AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
A TEK D +SF ++ ++ G P D S F NMI E + PT
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-----EGLRPTIPE 253
Query: 996 DVMDKLMSIMEVAILCLVESPEARP 1020
D +L +++E LC P+ RP
Sbjct: 254 DCPPRLRNVIE---LCWSGDPKKRP 275
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g
Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V + +LPS +V ++ + E +D FL E + + H NII+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRL 111
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+EY++ GSL + L+ A +F Q + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGT--FGYAAPEIAHMM 940
VH D++++N+L++S VSDFG+ + L +P ++ +T G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR 225
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ T DV S+G++ EV+ G P +S ++I +++ +RLP P MD
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEG--YRLPPP----MD 274
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ ++ + C + RP +++ ++L K
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 66 TWFGIFCNXXXXXXXXXXXXXXXNGTFQDFSF-SSFPHLMYLNL----SCNVLYGNIPPQ 120
TW G+ C+ + + SS +L YLN N L G IPP
Sbjct: 37 TWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA 96
Query: 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180
I+ L++L L + + +SG IP + + L L F N L G++P I L + +T
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 181 CHNNFSGRIPPSLGXXXXXXXXXXXXXXXF-GSIPNVMGNLNSLSILDLSQNQLRGSIPF 239
N SG IP S G G IP NLN L+ +DLS+N L G
Sbjct: 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASV 215
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMS 299
+ N ++L KNSL F +G K+L LDL N+++G++P + L L ++
Sbjct: 216 LFGSDKNTQKIHLAKNSL-AFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 300 LFNNSLSGSIPPTQGNLE 317
+ N+L G I P GNL+
Sbjct: 275 VSFNNLCGEI-PQGGNLQ 291
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 4/222 (1%)
Query: 213 IPNVMGNLNSLSILDLSQ-NQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL 271
IP+ + NL L+ L + N L G IP ++A L+ L LY+ ++ G IP + +K+L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 272 FELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEAL-SELGLYINQLD 330
LD S N L G++P S S+L +L ++ N +SG+IP + G+ L + + + N+L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 331 GVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTK 390
G IPP+ NL +L + L N G G K+ K+ L +N L+ + +G
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKN 245
Query: 391 LVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEA 432
L +++ N ++G +P+ L L L + NNL G++ +
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 104/220 (47%), Gaps = 4/220 (1%)
Query: 381 IPHSIGNLTKLVLVNMCE-NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439
IP S+ NL L + + N+L G IP + LT L L N+ G + + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKL-QVLDLSSNHIV 498
LD S N L G + + + P L N I G+IP G SKL + +S N +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 499 GKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSK 558
GKIP F L +L + L+ N L G + FGS Q + L+ N L+ + K +G
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKN 245
Query: 559 LHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
L+ L+L NN+ +P +L L L++S N L GEIP
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 114/261 (43%), Gaps = 33/261 (12%)
Query: 442 LDLSQNNLYGE--ISFNWRNFPKLG-TFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIV 498
LDLS NL I + N P L + +NN+ G IPP I ++L L ++ ++
Sbjct: 55 LDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVS 114
Query: 499 GKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSK 558
G IP ++ +L L + N LSG +P SL L + N++S +IP S G+ SK
Sbjct: 115 GAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSK 174
Query: 559 LHY-LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQI-CXXXXXXXXXXXXXX 616
L + +S N+ KIP F L +L+ +DLS N L+G+
Sbjct: 175 LFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL 233
Query: 617 XFDL----------------------IPGCFEEMRSLSRIDIAYNELQGPIP---NSTAF 651
FDL +P +++ L +++++N L G IP N F
Sbjct: 234 AFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRF 293
Query: 652 KDGLMEGNKGLCGNFKALPSC 672
NK LCG+ LP+C
Sbjct: 294 DVSAYANNKCLCGS--PLPAC 312
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 11/241 (4%)
Query: 333 IPPSIGNLSSLRTLYLYD-NGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKL 391
IP S+ NL L LY+ N G +P I L L L + ++SG IP + + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 392 VLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL-TFLDLSQNNLY 450
V ++ N L G +P S +L +L + F+ N + G + +++G L T + +S+N L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 451 GEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI---VGKIPVQFEK 507
G+I + N L + S N + G G Q + L+ N + +GK+ +
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS--- 243
Query: 508 LFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNN 567
+LN L L N++ G +P L L L++S N L IP+ GNL + +NN
Sbjct: 244 -KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANN 301
Query: 568 Q 568
+
Sbjct: 302 K 302
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFG 434
N+L G IP +I LT+L + + ++ G IP + +L L F+ N L G + +
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 435 DHPNLTFLDLSQNNLYGEISFNWRNFPKLGT-FNASMNNIYGSIPPEIGDSSKLQVLDLS 493
PNL + N + G I ++ +F KL T S N + G IPP + + L +DLS
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLS 205
Query: 494 SNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM 553
N + G V F + K+ L N L+ + + G L LDL N++ ++P+ +
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGL 264
Query: 554 GNLSKLHYLNLSNNQFNHKIP 574
L LH LN+S N +IP
Sbjct: 265 TQLKFLHSLNVSFNNLCGEIP 285
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
Length = 287
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 126/268 (47%), Gaps = 33/268 (12%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-----EMADQ-DEFLNEVLALTEIRHR 819
IGKG G V+K L + A+K S +L D EM ++ EF EV ++ + H
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
NI+K +G N +V E++ G L L D A W+ ++ ++ +A + Y+
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQ 139
Query: 880 HDCLPPIVHGDISSKNVLLDSEHE-----AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
+ PPIVH D+ S N+ L S E A V+DF +++ + HS + G F + AP
Sbjct: 140 NQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-QSVHSV--SGLLGNFQWMAP 195
Query: 935 EI--AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
E A TEK D +SF ++ ++ G P D S F NMI E + PT
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-----EGLRPT 250
Query: 993 PSRDVMDKLMSIMEVAILCLVESPEARP 1020
D +L +++E LC P+ RP
Sbjct: 251 IPEDCPPRLRNVIE---LCWSGDPKKRP 275
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 146/297 (49%), Gaps = 34/297 (11%)
Query: 751 YEEIIKAIDDFGEKY---------CIGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDE 799
YE+ + + +F ++ +G G G V + +LPS +V ++ + E
Sbjct: 28 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
+D FL E + + H NII+ G + ++ IV+E ++ GSL + L+ A +F
Sbjct: 88 KQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QF 144
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NP 917
Q + +++G+A+ + YL VH D++++N+L++S VSDFG+++ L +P
Sbjct: 145 TVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 918 HSSNWTAFAGT--FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSS 974
++ +T G + +PE + T DV S+G++ EV+ G P +S
Sbjct: 202 EAA-YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--- 257
Query: 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++I +++ +RLP P MD ++ ++ + C + RP +++ ++L K
Sbjct: 258 --DVIKAVDEG--YRLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V + +LPS +V ++ + E +D FL E + + H NII+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRL 111
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+E ++ GSL + L+ A +F Q + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGT--FGYAAPEIAHMM 940
VH D++++N+L++S VSDFG+++ L +P ++ +T G + +PE
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR 225
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ T DV S+G++ EV+ G P +S ++I +++ +RLP P MD
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEG--YRLPPP----MD 274
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ ++ + C + RP +++ ++L K
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 767 IGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G G G V + +LPS +V ++ + E +D FL E + + H NII+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIRL 82
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
G + ++ IV+E ++ GSL + L+ A +F Q + +++G+A+ + YL
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD---M 137
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGT--FGYAAPEIAHMM 940
VH D++++N+L++S VSDFG+++ L +P ++ +T G + +PE
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAIAYR 196
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
+ T DV S+G++ EV+ G P +S ++I +++ +RLP P MD
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEG--YRLPPP----MD 245
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++ ++ + C + RP +++ ++L K
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 35/275 (12%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG G K +G + +K+ + FDE Q FL EV + + H N++KF
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL---IRFDE-ETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G + ++EY+ G+L I+K + ++ W+QR++ K +A+ ++YLH
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIK--SMDSQYPWSQRVSFAKDIASGMAYLHS---MN 128
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFL--------------NPHSSNWTAFAGTFGY 931
I+H D++S N L+ V+DFG+A+ + P G +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ + EK DV SFG++ E+I + N DY+ N+ +++
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNC 248
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P S + + C PE RP+ K+
Sbjct: 249 PP----------SFFPITVRCCDLDPEKRPSFVKL 273
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 32/281 (11%)
Query: 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DD+ + IG G V A P A+K+ N + M DE L E+ A+++
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSM---DELLKEIQAMSQCH 66
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-----FGWNQRMNVIKGVA 872
H NI+ ++ ++V + L GS+ I+K A E + +++ V
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-----PHSSNWTAFAG 927
L YLH + +H D+ + N+LL + ++DFG++ FL + F G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 928 TFGYAAPEIAHMMRATE-KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986
T + APE+ +R + K D+ SFG+ A+E+ G P + + M + L
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP-------YHKYPPMKV-LMLTL 235
Query: 987 DHRLPTPSRDVMDKLM------SIMEVAILCLVESPEARPT 1021
+ P+ V DK M S ++ LCL + PE RPT
Sbjct: 236 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 32/281 (11%)
Query: 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DD+ + IG G V A P A+K+ N + M DE L E+ A+++
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSM---DELLKEIQAMSQCH 71
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-----FGWNQRMNVIKGVA 872
H NI+ ++ ++V + L GS+ I+K A E + +++ V
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-----PHSSNWTAFAG 927
L YLH + +H D+ + N+LL + ++DFG++ FL + F G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 928 TFGYAAPEIAHMMRATE-KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986
T + APE+ +R + K D+ SFG+ A+E+ G P + + M + L
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP-------YHKYPPMKV-LMLTL 240
Query: 987 DHRLPTPSRDVMDKLM------SIMEVAILCLVESPEARPT 1021
+ P+ V DK M S ++ LCL + PE RPT
Sbjct: 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 38/308 (12%)
Query: 742 VLNFNGKFLYEEIIKAIDDFGEKY---------CIGKGRQGSVYKAELP----SGIIFAV 788
V F F +E+ +A+ +F ++ IG G G V L I A+
Sbjct: 3 VRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAI 62
Query: 789 KKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTT 848
K + + D FL+E + + H NII G + + I++EY++ GSL
Sbjct: 63 KTLKAGYTDKQRRD---FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 849 ILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908
L+ + F Q + +++G+ + + YL VH D++++N+L++S VSD
Sbjct: 120 FLRKNDG--RFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSD 174
Query: 909 FGIAKFL--NPHSSNWTAFAGTFG--YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNH 963
FG+++ L +P ++ +T G + APE + T DV S+G++ EV+ G
Sbjct: 175 FGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 964 PRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
P +S ++I I + +RLP P MD +++ ++ + C + RP
Sbjct: 234 PYWDMSNQ-----DVIKAIEEG--YRLPPP----MDCPIALHQLMLDCWQKERSDRPKFG 282
Query: 1024 KVCNLLCK 1031
++ N+L K
Sbjct: 283 QIVNMLDK 290
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 14/248 (5%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALT 814
IDDF +GKG+ G+VY A E S I A+K F SQ+ ++ + + E+
Sbjct: 21 TIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQI--EKEGVEHQLRREIEIQA 78
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ H NI++ + + + + +++ EY RG L L+ F + +++ +A+A
Sbjct: 79 HLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT---FDEQRTATIMEELADA 135
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
L Y H ++H DI +N+LL + E ++DFG + ++ S GT Y P
Sbjct: 136 LMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPP 190
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
E+ EK D+ GVL E++ GN P + S + + I +++ +PT +
Sbjct: 191 EMIEGRMHNEKVDLWCIGVLCYELLVGNPP--FESASHNETYRRIVKVDLKFPASVPTGA 248
Query: 995 RDVMDKLM 1002
+D++ KL+
Sbjct: 249 QDLISKLL 256
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.2 bits (204), Expect = 7e-16, Method: Composition-based stats.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 27/288 (9%)
Query: 743 LNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMA 801
L F G Y++ D K+ +G G+ G VY+ + AVK L ++
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTM 64
Query: 802 DQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGW 861
+ +EFL E + EI+H N+++ G C+ +I++E++ G+L L+ + +E
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNA 123
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
+ + +++A+ YL +H D++++N L+ H V+DFG+++ +
Sbjct: 124 VVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDT 178
Query: 922 WTAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN 977
+TA AG + APE + + K DV +FGVL E+ G P Y + S
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYE 236
Query: 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
++ + D+R+ P +K+ +M C +P RP+ ++
Sbjct: 237 LLEK-----DYRMERP-EGCPEKVYELMRA---CWQWNPSDRPSFAEI 275
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf
12058
Length = 285
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 116/232 (50%), Gaps = 22/232 (9%)
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
+FL+E + + H NII G + + I++EY++ GSL L+ + F Q
Sbjct: 55 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--RFTVIQL 112
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNW 922
+ +++G+ + + YL VH D++++N+L++S VSDFG+++ L +P ++ +
Sbjct: 113 VGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA-Y 168
Query: 923 TAFAGTFG--YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMI 979
T G + APE + T DV S+G++ EV+ G P +S ++I
Sbjct: 169 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVI 223
Query: 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
I + +RLP P MD +++ ++ + C + RP ++ N+L K
Sbjct: 224 KAIEEG--YRLPPP----MDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDK 269
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 116/232 (50%), Gaps = 22/232 (9%)
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
+FL+E + + H NII G + + I++EY++ GSL L+ + F Q
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--RFTVIQL 118
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNW 922
+ +++G+ + + YL VH D++++N+L++S VSDFG+++ L +P ++ +
Sbjct: 119 VGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA-Y 174
Query: 923 TAFAGTFG--YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMI 979
T G + APE + T DV S+G++ EV+ G P +S ++I
Sbjct: 175 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVI 229
Query: 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
I + +RLP P MD +++ ++ + C + RP ++ N+L K
Sbjct: 230 KAIEEG--YRLPPP----MDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDK 275
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+DEF+ E + + H +++ +G C+ + FI++EY+ G L L++ F
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 120
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q + + K V A+ YL +H D++++N L++ + VSDFG+++++ +
Sbjct: 121 QLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEY 175
Query: 923 TAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T+ G+ ++ PE+ + + K D+ +FGVL E+ G P + F+N
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP-------YERFTNS 228
Query: 979 IT--EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
T I Q L RL P +K+ +IM C E + RPT K
Sbjct: 229 ETAEHIAQGL--RLYRPHL-ASEKVYTIM---YSCWHEKADERPTFK 269
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 17/255 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+D+ Y IG G G K S G I K+ + + + A++ ++EV L E++
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELK 63
Query: 818 HRNIIKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANA 874
H NI++++ + ++ +IV EY + G L +++ +++ + + V+ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 875 LSYLHH--DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
L H D ++H D+ NV LD + + DFG+A+ LN +S AF GT Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN--MITEINQNLDHRL 990
+PE + M EK D+ S G L E+ P F++FS + +I + R+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPP-------FTAFSQKELAGKIREGKFRRI 236
Query: 991 PTPSRDVMDKLMSIM 1005
P D ++++++ M
Sbjct: 237 PYRYSDELNEIITRM 251
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 20/229 (8%)
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
+FL+E + + H NII+ G + + + IV+EY++ GSL T L+ +F Q
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--QFTIMQL 153
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNW 922
+ +++GV + YL VH D++++NVL+DS VSDFG+++ L +P ++ +
Sbjct: 154 VGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA-Y 209
Query: 923 TAFAGTFG--YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT 980
T G + APE + DV SFGV+ EV+ + TN ++I+
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDVIS 265
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ + +RLP P M ++ ++ + C + RP ++ ++L
Sbjct: 266 SVEEG--YRLPAP----MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 235 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 235 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 187
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 239
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 240 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 187
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 239
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 240 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 187
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 239
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 240 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 235 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 72
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 132 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 186
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 238
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 239 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 266
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 235 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 70
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 184
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 236
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 237 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 70
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 184
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 236
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 237 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 264
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-4-
Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-8-
Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+DEF+ E + + H +++ +G C+ + FI++EY+ G L L++ F
Sbjct: 54 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 111
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q + + K V A+ YL +H D++++N L++ + VSDFG+++++ +
Sbjct: 112 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEY 166
Query: 923 TAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T+ G+ ++ PE+ + + K D+ +FGVL E+ G P + F+N
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP-------YERFTNS 219
Query: 979 IT--EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
T I Q L RL P +K+ +IM C E + RPT K
Sbjct: 220 ETAEHIAQGL--RLYRPHL-ASEKVYTIMYS---CWHEKADERPTFK 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+DEF+ E + + H +++ +G C+ + FI++EY+ G L L++ F
Sbjct: 47 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 104
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q + + K V A+ YL +H D++++N L++ + VSDFG+++++ +
Sbjct: 105 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEY 159
Query: 923 TAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T+ G+ ++ PE+ + + K D+ +FGVL E+ G P + F+N
Sbjct: 160 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP-------YERFTNS 212
Query: 979 IT--EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
T I Q L RL P +K+ +IM C E + RPT K
Sbjct: 213 ETAEHIAQGL--RLYRPHL-ASEKVYTIMYS---CWHEKADERPTFK 253
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+DEF+ E + + H +++ +G C+ + FI++EY+ G L L++ F
Sbjct: 48 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 105
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q + + K V A+ YL +H D++++N L++ + VSDFG+++++ +
Sbjct: 106 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEY 160
Query: 923 TAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T+ G+ ++ PE+ + + K D+ +FGVL E+ G P + F+N
Sbjct: 161 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP-------YERFTNS 213
Query: 979 IT--EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
T I Q L RL P +K+ +IM C E + RPT K
Sbjct: 214 ETAEHIAQGL--RLYRPHL-ASEKVYTIMYS---CWHEKADERPTFK 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+DEF+ E + + H +++ +G C+ + FI++EY+ G L L++ F
Sbjct: 43 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 100
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q + + K V A+ YL +H D++++N L++ + VSDFG+++++ +
Sbjct: 101 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEY 155
Query: 923 TAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T+ G+ ++ PE+ + + K D+ +FGVL E+ G P + F+N
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP-------YERFTNS 208
Query: 979 IT--EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
T I Q L RL P +K+ +IM C E + RPT K
Sbjct: 209 ETAEHIAQGL--RLYRPHL-ASEKVYTIMYS---CWHEKADERPTFK 249
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
+FL+E + + H NII+ G + + + IV+EY++ GSL T L+ +F Q
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--QFTIMQL 153
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNW 922
+ +++GV + YL VH D++++NVL+DS VSDFG+++ L +P ++
Sbjct: 154 VGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 923 TAFAGT-FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981
T + APE + DV SFGV+ EV+ + TN ++I+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDVISS 266
Query: 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ + +RLP P M ++ ++ + C + RP ++ ++L
Sbjct: 267 VEEG--YRLPAP----MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of Activation
For Tec Family Kinases
Length = 283
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 22/225 (9%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+DEF+ E + + H +++ +G C+ + FI++EY+ G L L++ F
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 120
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSN 921
Q + + K V A+ YL +H D++++N L++ + VSDFG++++ L+ ++
Sbjct: 121 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS 177
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980
++ PE+ + + K D+ +FGVL E+ G P + F+N T
Sbjct: 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP-------YERFTNSET 230
Query: 981 --EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
I Q L RL P +K+ +IM C E + RPT K
Sbjct: 231 AEHIAQGL--RLYRPHL-ASEKVYTIMYS---CWHEKADERPTFK 269
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 27/267 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ A+K + E FL E + +++H +++ +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-----SFLEEAQIMKKLKHDKLVQLYA 71
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+++GSL LKD + +++ VA ++Y+
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIER---MNY 126
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ S N+L+ + ++DFG+A+ + + TA G + APE A R T
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEX--TARQGAKFPIKWTAPEAALYGRFT 184
Query: 944 EKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
K DV SFG+L E++ KG P + +N +R+P P D +
Sbjct: 185 IKSDVWSFGILLTELVTKGRVP-------YPGMNNREVLEQVERGYRMPCPQ----DCPI 233
Query: 1003 SIMEVAILCLVESPEARPTMKKVCNLL 1029
S+ E+ I C + PE RPT + + + L
Sbjct: 234 SLHELMIHCWKKDPEERPTFEYLQSFL 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 69
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 129 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAPAGAKFPIKWTAPE 183
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 235
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 236 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 70
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAPAGAKFPIKWTAPE 184
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 236
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 237 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 264
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+DEF+ E + + H +++ +G C+ + FI++EY+ G L L++ F
Sbjct: 48 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 105
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q + + K V A+ YL +H D++++N L++ + VSDFG+++++ +
Sbjct: 106 QLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEY 160
Query: 923 TAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T+ G+ ++ PE+ + + K D+ +FGVL E+ G P + F+N
Sbjct: 161 TSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP-------YERFTNS 213
Query: 979 IT--EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
T I Q L RL P +K+ +IM C E + RPT K
Sbjct: 214 ETAEHIAQGL--RLYRPHL-ASEKVYTIMYS---CWHEKADERPTFK 254
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKEAAVMKEIKH 272
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H +++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 332 EKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 386
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 387 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 438
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 439 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 466
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 17/255 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+D+ Y IG G G K S G I K+ + + + A++ ++EV L E++
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELK 63
Query: 818 HRNIIKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANA 874
H NI++++ + ++ +IV EY + G L +++ +++ + + V+ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 875 LSYLHH--DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
L H D ++H D+ NV LD + + DFG+A+ LN +S F GT Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN--MITEINQNLDHRL 990
+PE + M EK D+ S G L E+ P F++FS + +I + R+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPP-------FTAFSQKELAGKIREGKFRRI 236
Query: 991 PTPSRDVMDKLMSIM 1005
P D ++++++ M
Sbjct: 237 PYRYSDELNEIITRM 251
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKEAAVMKEIKH 314
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H +++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 374 EKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 428
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 429 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 480
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 481 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 508
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKEAAVMKEIKH 275
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H +++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 335 EKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 389
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 441
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 442 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 469
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I+ E++ G+L L+ + +E + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 235 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I+ E++ G+L L+ + +E + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 234
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 235 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 27/275 (9%)
Query: 752 EEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEV 810
EE+ ++ GE G GSVYKA +G I A+K+ + +D E + E+
Sbjct: 28 EEVFDVLEKLGE------GSYGSVYKAIHKETGQIVAIKQVPVE------SDLQEIIKEI 75
Query: 811 LALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG 870
+ + +++K++G +IV EY GS++ I++ K ++ +++
Sbjct: 76 SIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATILQS 133
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
L YLH +H DI + N+LL++E A ++DFG+A L + GT
Sbjct: 134 TLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF 190
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
+ APE+ + D+ S G+ A+E+ +G P + + F + N R
Sbjct: 191 WMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF---MIPTNPPPTFRK 247
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P D + + CLV+SPE R T ++
Sbjct: 248 PELWSD------NFTDFVKQCLVKSPEQRATATQL 276
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I+ E++ G+L L+ + +E + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 187
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 239
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 240 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + + TA AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 187
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 239
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 240 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 28/267 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V KA+ + + A+K+ S+ +++ F+ E+ L+ + H NI+K +G
Sbjct: 17 VGRGAFGVVCKAKWRAKDV-AIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
C N +V EY + GSL +L + M+ + ++YLH +
Sbjct: 70 ACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 887 VHGDISSKNVLLDSEHEA-HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H D+ N+LL + + DFG A + H +N G+ + APE+ +EK
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAPEVFEGSNYSEK 184
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN---LDHRLPTPSRDVMDKLM 1002
DV S+G++ EVI P D + +F M N L LP P +M +
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIGG--PAFRIMWAVHNGTRPPLIKNLPKPIESLMTR-- 240
Query: 1003 SIMEVAILCLVESPEARPTMKKVCNLL 1029
C + P RP+M+++ ++
Sbjct: 241 --------CWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 28/267 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V KA+ + + A+K+ S+ +++ F+ E+ L+ + H NI+K +G
Sbjct: 16 VGRGAFGVVCKAKWRAKDV-AIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
C N +V EY + GSL +L + M+ + ++YLH +
Sbjct: 69 ACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 887 VHGDISSKNVLLDSEHEA-HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H D+ N+LL + + DFG A + H +N G+ + APE+ +EK
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAPEVFEGSNYSEK 183
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN---LDHRLPTPSRDVMDKLM 1002
DV S+G++ EVI P D + +F M N L LP P +M +
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGG--PAFRIMWAVHNGTRPPLIKNLPKPIESLMTR-- 239
Query: 1003 SIMEVAILCLVESPEARPTMKKVCNLL 1029
C + P RP+M+++ ++
Sbjct: 240 --------CWSKDPSQRPSMEEIVKIM 258
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTFTAHAGAKFPIKWTAPE 180
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDPSQVYELLEK-----DYRMERP- 232
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 233 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 260
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 23/182 (12%)
Query: 768 GKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGF 827
+GR G V+KA+L + + AVK F Q D+ + Q+E+ EV +L ++H NI++F G
Sbjct: 33 ARGRFGCVWKAQLLNEYV-AVKIFPIQ---DKQSWQNEY--EVYSLPGMKHENILQFIGA 86
Query: 828 CSNAQHS----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC- 882
++++ + ++GSL+ LK + + WN+ ++ + +A L+YLH D
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS----WNELCHIAETMARGLAYLHEDIP 142
Query: 883 ------LPPIVHGDISSKNVLLDSEHEAHVSDFGIA-KFLNPHSSNWT-AFAGTFGYAAP 934
P I H DI SKNVLL + A ++DFG+A KF S+ T GT Y AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 935 EI 936
E+
Sbjct: 203 EV 204
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.3 bits (194), Expect = 9e-15, Method: Composition-based stats.
Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALTE 815
IDDF +GKG+ G+VY A E + I A+K F SQL ++ + + E+ +
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSH 70
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+RH NI++ + + + + +++ E+ RG L L+ F + ++ +A+AL
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADAL 127
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
Y H ++H DI +N+L+ + E ++DFG + ++ S GT Y PE
Sbjct: 128 HYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPE 182
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ EK D+ GVL E + G P D S + + I ++ L S+
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD--SPSHTETHRRIVNVDLKFPPFLSDGSK 240
Query: 996 DVMDKLM 1002
D++ KL+
Sbjct: 241 DLISKLL 247
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 27/265 (10%)
Query: 767 IGKGRQGSVYKAELPSG-IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V+ L + + AVK L D A +FL E L + H NI++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYSHPNIVRLI 178
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G C+ Q +IV E + G T L+ + A + ++ A + YL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV--KTLLQMVGDAAAGMEYLESKC--- 233
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG----TFGYAAPEIAHMMR 941
+H D++++N L+ ++ +SDFG+++ + A G + APE + R
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 942 ATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDK 1000
+ + DV SFG+L E G P + + SN T RLP P D
Sbjct: 292 YSSESDVWSFGILLWETFSLGASP-------YPNLSNQQTREFVEKGGRLPCPEL-CPDA 343
Query: 1001 LMSIMEVAILCLVESPEARPTMKKV 1025
+ +ME C P RP+ +
Sbjct: 344 VFRLME---QCWAYEPGQRPSFSTI 365
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 112/266 (42%), Gaps = 29/266 (10%)
Query: 767 IGKGRQGSVYKAELPSG-IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V+ L + + AVK L D A +FL E L + H NI++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYSHPNIVRLI 178
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G C+ Q +IV E + G T L+ + A + ++ A + YL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV--KTLLQMVGDAAAGMEYLESKC--- 233
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF-----GYAAPEIAHMM 940
+H D++++N L+ ++ +SDFG+++ + A +G + APE +
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 941 RATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
R + + DV SFG+L E G P + + SN T RLP P D
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASP-------YPNLSNQQTREFVEKGGRLPCPEL-CPD 342
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKV 1025
+ +ME C P RP+ +
Sbjct: 343 AVFRLME---QCWAYEPGQRPSFSTI 365
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALTE 815
IDDF +GKG+ G+VY A E + I A+K F SQL ++ + + E+ +
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSH 71
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+RH NI++ + + + + +++ E+ RG L L+ F + ++ +A+AL
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADAL 128
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
Y H ++H DI +N+L+ + E ++DFG + ++ S GT Y PE
Sbjct: 129 HYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPE 183
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ EK D+ GVL E + G P D S + + I ++ L S+
Sbjct: 184 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD--SPSHTETHRRIVNVDLKFPPFLSDGSK 241
Query: 996 DVMDKLM 1002
D++ KL+
Sbjct: 242 DLISKLL 248
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALTE 815
IDDF +GKG+ G+VY A E + I A+K F SQL ++ + + E+ +
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSH 70
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+RH NI++ + + + + +++ E+ RG L L+ F + ++ +A+AL
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADAL 127
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
Y H ++H DI +N+L+ + E ++DFG + ++ S GT Y PE
Sbjct: 128 HYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPE 182
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ EK D+ GVL E + G P D S + + I ++ L S+
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD--SPSHTETHRRIVNVDLKFPPFLSDGSK 240
Query: 996 DVMDKLM 1002
D++ KL+
Sbjct: 241 DLISKLL 247
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 27/261 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQVMKKLRHEKLVQLYA 246
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
K DV SFG+L E+ KG P + N +R+P P + + L
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP-ECPESLH 411
Query: 1003 SIMEVAILCLVESPEARPTMK 1023
+M C + PE RPT +
Sbjct: 412 DLM---CQCWRKEPEERPTFE 429
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 27/261 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQVMKKLRHEKLVQLYA 246
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
K DV SFG+L E+ KG P + N +R+P P + + L
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP-ECPESLH 411
Query: 1003 SIMEVAILCLVESPEARPTMK 1023
+M C + PE RPT +
Sbjct: 412 DLM---CQCWRKEPEERPTFE 429
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 23/261 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A E +G AVKK + + ++ NEV+ + + H N++ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMD----LRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V E+L+ G+LT I+ +E Q V V ALSYLH+
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIATVCLSVLRALSYLHNQ---G 161
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL S+ +SDFG ++ GT + APE+ + +
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
D+ S G++ +E+I G P F+ + + + LP +D + K+ S++
Sbjct: 222 VDIWSLGIMVIEMIDGEPP---------YFNEPPLQAMRRIRDSLPPRVKD-LHKVSSVL 271
Query: 1006 EVAI-LCLVESPEARPTMKKV 1025
+ L LV P R T +++
Sbjct: 272 RGFLDLMLVREPSQRATAQEL 292
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 27/261 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQVMKKLRHEKLVQLYA 329
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 330 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY--- 384
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
K DV SFG+L E+ KG P + N +R+P P + + L
Sbjct: 443 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP-ECPESLH 494
Query: 1003 SIMEVAILCLVESPEARPTMK 1023
+M C + PE RPT +
Sbjct: 495 DLM---CQCWRKEPEERPTFE 512
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 69
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I+ E++ G+L L+ + +E + + +++A+ YL
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + + TA AG + APE
Sbjct: 129 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 183
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYELLEK-----DYRMERP- 235
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 236 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 263
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 27/261 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQVMKKLRHEKLVQLYA 246
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 247 VVSE-EPIYIVGEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
K DV SFG+L E+ KG P + N +R+P P + + L
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP-ECPESLH 411
Query: 1003 SIMEVAILCLVESPEARPTMK 1023
+M C + PE RPT +
Sbjct: 412 DLM---CQCWRKEPEERPTFE 429
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 22/233 (9%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+D+F+ E + ++ H +++ +G C +V E+++ G L+ L+ F
Sbjct: 66 EDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 123
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSN 921
+ + V ++YL C ++H D++++N L+ VSDFG+ +F L+ ++
Sbjct: 124 TLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 180
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMIT 980
T +A+PE+ R + K DV SFGVL EV +G P + S S ++
Sbjct: 181 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVE 235
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAIL--CLVESPEARPTMKKVCNLLCK 1031
+I+ RL P +L S I+ C E PE RP ++ L +
Sbjct: 236 DISTGF--RLYKP------RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 280
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 9/215 (4%)
Query: 754 IIKAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLA 812
I + I+DF +GKG VY+AE + +G+ A+K + + ++ Q NEV
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQ-RVQNEVKI 64
Query: 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+++H +I++ + + ++ + ++V E G + LK+ K F N+ + + +
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQII 122
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN-PHSSNWTAFAGTFGY 931
+ YLH I+H D++ N+LL ++DFG+A L PH ++T GT Y
Sbjct: 123 TGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNY 178
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRD 966
+PEIA + DV S G + ++ G P D
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 77
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+++GSL LK + K Q +++ +A+ ++Y+
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + WTA G + APE A R T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 236
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFE 260
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 22/233 (9%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+++F+ E + ++ H +++ +G C +V+E+++ G L+ L+ F
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL--FAAE 104
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSN 921
+ + V ++YL C ++H D++++N L+ VSDFG+ +F L+ ++
Sbjct: 105 TLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMIT 980
T +A+PE+ R + K DV SFGVL EV +G P + S S ++
Sbjct: 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVE 216
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAIL--CLVESPEARPTMKKVCNLLCK 1031
+I+ RL P +L S I+ C E PE RP ++ L +
Sbjct: 217 DISTGF--RLYKP------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I++E++ G+L L+ + +E + + +++A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + + TA AG + APE
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDPSQVYELLEK-----DYRMERP- 232
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 233 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 260
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 22/260 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V+K + + + A+K + L + + ++ E+ L++ + K++
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G +I+ EYL GS +L+ A F Q ++K + L YLH +
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSE---K 140
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H DI + NVLL + + ++DFG+A L F GT + APE+ K
Sbjct: 141 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
D+ S G+ A+E+ KG P + F +I + N P V D S
Sbjct: 201 ADIWSLGITAIELAKGEPPNSDMHPMRVLF--LIPKNN---------PPTLVGDFTKSFK 249
Query: 1006 EVAILCLVESPEARPTMKKV 1025
E CL + P RPT K++
Sbjct: 250 EFIDACLNKDPSFRPTAKEL 269
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 17/255 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+D+ Y IG G G K S G I K+ + + + A++ ++EV L E++
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELK 63
Query: 818 HRNIIKFHGFCSNAQHS--FIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANA 874
H NI++++ + ++ +IV EY + G L +++ +++ + + V+ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 875 LSYLHH--DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
L H D ++H D+ NV LD + + DFG+A+ LN F GT Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN--MITEINQNLDHRL 990
+PE + M EK D+ S G L E+ P F++FS + +I + R+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPP-------FTAFSQKELAGKIREGKFRRI 236
Query: 991 PTPSRDVMDKLMSIM 1005
P D ++++++ M
Sbjct: 237 PYRYSDELNEIITRM 251
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ A AVK + E FL E + ++H ++K H
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-----FLAEANVMKTLQHDKLVKLHA 250
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++E++ +GSL LK D +K+ + ++ +A ++++
Sbjct: 251 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY--- 305
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ + ++DFG+A+ + + +TA G + APE + T
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L +E++ Y + SN E+ + L+ +R+P P + ++L
Sbjct: 364 IKSDVWSFGILLMEIVT------YGRIPYPGMSN--PEVIRALERGYRMPRPE-NCPEEL 414
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+IM + C PE RPT + + ++L
Sbjct: 415 YNIM---MRCWKNRPEERPTFEYIQSVL 439
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 45/276 (16%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 20 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 75
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L A+ +F + +++ + A + YLH I
Sbjct: 76 YSTKPQLA-IVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L ++ + DFG+A S W+ +G+ + APE+ M
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP------RDYV--STNFSSFSNMITEINQNLDHR 989
+ + DV++FG++ E++ G P RD + S S ++++ N R
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 245
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
M +LM+ CL + + RP+ ++
Sbjct: 246 --------MKRLMA------ECLKKKRDERPSFPRI 267
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ A AVK + E FL E + ++H ++K H
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-----AFLAEANVMKTLQHDKLVKLHA 77
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++E++ +GSL LK D +K+ + ++ +A ++++
Sbjct: 78 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQR---NY 132
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ + ++DFG+A+ + + +TA G + APE + T
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L +E++ Y + SN E+ + L+ +R+P P + ++L
Sbjct: 191 IKSDVWSFGILLMEIVT------YGRIPYPGMSN--PEVIRALERGYRMPRP-ENCPEEL 241
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+IM + C PE RPT + + ++L
Sbjct: 242 YNIM---MRCWKNRPEERPTFEYIQSVL 266
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 27/271 (9%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY+ + AVK L ++ + +EFL E + EI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +I+ E++ G+L L+ + +E + + +++A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + + TA AG + APE
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ + K DV +FGVL E+ G P Y + S ++ + D+R+ P
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDPSQVYELLEK-----DYRMERP- 232
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+K+ +M C +P RP+ ++
Sbjct: 233 EGCPEKVYELMRA---CWQWNPSDRPSFAEI 260
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 45/276 (16%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 32 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 87
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L A+ +F + +++ + A + YLH I
Sbjct: 88 YSTKPQLA-IVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L ++ + DFG+A S W+ +G+ + APE+ M
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP------RDYV--STNFSSFSNMITEINQNLDHR 989
+ + DV++FG++ E++ G P RD + S S ++++ N R
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 257
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
M +LM+ CL + + RP+ ++
Sbjct: 258 --------MKRLMA------ECLKKKRDERPSFPRI 279
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 82 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 195 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 245
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 246 YQLMR---LCWKERPEDRPTFDYLRSVL 270
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 85
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 86 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 140
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 199 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 249
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 250 YQLMR---LCWKERPEDRPTFDYLRSVL 274
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 189 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 239
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 240 YQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 70
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 71 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 125
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 184 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 234
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 235 YQLMR---LCWKERPEDRPTFDYLRSVL 259
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 80
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 81 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 135
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 194 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 244
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 245 YQLMR---LCWKERPEDRPTFDYLRSVL 269
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 29/211 (13%)
Query: 768 GKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF--- 824
+GR G V+KA+L + + AVK F Q D+ + Q E E+ + ++H N+++F
Sbjct: 24 ARGRFGCVWKAQLMNDFV-AVKIFPLQ---DKQSWQSE--REIFSTPGMKHENLLQFIAA 77
Query: 825 HGFCSNAQ-HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC- 882
SN + ++++ + D+GSLT LK + WN+ +V + ++ LSYLH D
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGNIIT----WNELCHVAETMSRGLSYLHEDVP 133
Query: 883 -------LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS--SNWTAFAGTFGYAA 933
P I H D SKNVLL S+ A ++DFG+A P + GT Y A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 934 PE-----IAHMMRATEKYDVHSFGVLALEVI 959
PE I A + D+++ G++ E++
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A + SG + AVKK + + ++ NEV+ + + +H N+++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMY 137
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V E+L+ G+LT I+ +E Q V V ALS LH
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG--- 190
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL + +SDFG ++ GT + APE+ + +
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G++ +E++ G P
Sbjct: 251 VDIWSLGIMVIEMVDGEPP 269
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.6 bits (187), Expect = 7e-14, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 22/233 (9%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+++F+ E + ++ H +++ +G C +V E+++ G L+ L+ F
Sbjct: 44 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 101
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSN 921
+ + V ++YL C ++H D++++N L+ VSDFG+ +F L+ ++
Sbjct: 102 TLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 158
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMIT 980
T +A+PE+ R + K DV SFGVL EV +G P + S S ++
Sbjct: 159 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVE 213
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAIL--CLVESPEARPTMKKVCNLLCK 1031
+I+ RL P +L S I+ C E PE RP ++ L +
Sbjct: 214 DISTGF--RLYKP------RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 258
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 76.6 bits (187), Expect = 7e-14, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 22/233 (9%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+++F+ E + ++ H +++ +G C +V E+++ G L+ L+ F
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 103
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSN 921
+ + V ++YL C ++H D++++N L+ VSDFG+ +F L+ ++
Sbjct: 104 TLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 160
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMIT 980
T +A+PE+ R + K DV SFGVL EV +G P + S S ++
Sbjct: 161 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVE 215
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAIL--CLVESPEARPTMKKVCNLLCK 1031
+I+ RL P +L S I+ C E PE RP ++ L +
Sbjct: 216 DISTGF--RLYKP------RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 260
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 22/233 (9%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+++F+ E + ++ H +++ +G C +V E+++ G L+ L+ F
Sbjct: 49 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 106
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSN 921
+ + V ++YL C ++H D++++N L+ VSDFG+ +F L+ ++
Sbjct: 107 TLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMIT 980
T +A+PE+ R + K DV SFGVL EV +G P + S S ++
Sbjct: 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVE 218
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAIL--CLVESPEARPTMKKVCNLLCK 1031
+I+ RL P +L S I+ C E PE RP ++ L +
Sbjct: 219 DISTGF--RLYKP------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + TA G + APE + T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 189 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 239
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 240 YQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ 863
+ FL E + ++RH +++ + S + +IV+EY+ +GSL LK + K Q
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQ 282
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923
+++ +A+ ++Y+ VH D+ + N+L+ V+DFG+ + + + +T
Sbjct: 283 LVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYT 337
Query: 924 AFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMI 979
A G + APE A R T K DV SFG+L E+ KG P + N
Sbjct: 338 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNRE 390
Query: 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
+R+P P + + L +M C + PE RPT +
Sbjct: 391 VLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 430
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 45/276 (16%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 32 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 87
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ S A IV+++ + SL L A+ +F + +++ + A + YLH I
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L ++ + DFG+A S W+ +G+ + APE+ M
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP------RDYV--STNFSSFSNMITEINQNLDHR 989
+ + DV++FG++ E++ G P RD + S S ++++ N R
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 257
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
M +LM+ CL + + RP+ ++
Sbjct: 258 --------MKRLMA------ECLKKKRDERPSFPRI 279
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,6-Difluorophenyl)-1h-1,
2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 27/270 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
D K+ +G G+ G VY + AVK L ++ + +EFL E + EI+H
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 87
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL 878
N+++ G C+ +IV+EY+ G+L L+ + +E + + +++A+ YL
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLR-ECNREEVTAVVLLYMATQISSAMEYL 146
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPE 935
+H D++++N L+ H V+DFG+++ + +TA AG + APE
Sbjct: 147 EKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 201
Query: 936 IAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
+ K DV +FGVL E+ G P Y + S +++ + +R+ P
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYDLLEK-----GYRMEQP- 253
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
K+ +M C SP RP+ +
Sbjct: 254 EGCPPKVYELMRA---CWKWSPADRPSFAE 280
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A + SG + AVKK + + ++ NEV+ + + +H N+++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V E+L+ G+LT I+ +E Q V V ALS LH
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG--- 267
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL + +SDFG ++ GT + APE+ + +
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G++ +E++ G P
Sbjct: 328 VDIWSLGIMVIEMVDGEPP 346
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 83
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 84 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 138
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + TA G + APE + T
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIKWTAPEAINYGTFT 196
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 197 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 247
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 248 YQLMR---LCWKERPEDRPTFDYLRSVL 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + TA G + APE + T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIKWTAPEAINYGTFT 188
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 189 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 239
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 240 YQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + TA G + APE + T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIKWTAPEAINYGTFT 188
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 189 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 239
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 240 YQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 82 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + TA G + APE + T
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIKWTAPEAINYGTFT 194
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 195 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 245
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 246 YQLMR---LCWKERPEDRPTFDYLRSVL 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 76
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 77 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 131
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + TA G + APE + T
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIKWTAPEAINYGTFT 189
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 190 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 240
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 241 YQLMR---LCWKERPEDRPTFDYLRSVL 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 77
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 78 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 132
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + TA G + APE + T
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIKWTAPEAINYGTFT 190
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 191 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 241
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 242 YQLMR---LCWKERPEDRPTFDYLRSVL 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 84
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 85 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 139
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + N+L+ ++DFG+A+ + + TA G + APE + T
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIKWTAPEAINYGTFT 197
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 198 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 248
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 249 YQLMR---LCWKERPEDRPTFDYLRSVL 273
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 33/265 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ A AVK + E FL E + ++H ++K H
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-----FLAEANVMKTLQHDKLVKLHA 244
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++E++ +GSL LK D +K+ + ++ +A ++++
Sbjct: 245 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY--- 299
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKY 946
+H D+ + N+L+ + ++DFG+A+ WT APE + T K
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFTIKS 350
Query: 947 DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKLMSI 1004
DV SFG+L +E++ Y + SN E+ + L+ +R+P P + ++L +I
Sbjct: 351 DVWSFGILLMEIVT------YGRIPYPGMSN--PEVIRALERGYRMPRPE-NCPEELYNI 401
Query: 1005 MEVAILCLVESPEARPTMKKVCNLL 1029
M + C PE RPT + + ++L
Sbjct: 402 M---MRCWKNRPEERPTFEYIQSVL 423
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ AVK + D FL E + +++H+ +++ +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYA 71
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY++ GSL LK + K N+ +++ +A ++++
Sbjct: 72 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 126
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H ++ + N+L+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRDVMDKL 1001
K DV SFG+L E++ H R + +N E+ QNL+ +R+ P + ++L
Sbjct: 185 IKSDVWSFGILLTEIV--THGR----IPYPGMTN--PEVIQNLERGYRMVRPD-NCPEEL 235
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNLL 1029
+M LC E PE RPT + ++L
Sbjct: 236 YQLMR---LCWKERPEDRPTFDYLRSVL 260
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + +IRH +++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKIRHEKLVQLYA 80
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 239
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 73/297 (24%), Positives = 136/297 (45%), Gaps = 34/297 (11%)
Query: 751 YEEIIKAIDDFGEKY---------CIGKGRQGSVY--KAELPSGIIFAVKKFNSQLLFDE 799
YE+ +A+ F ++ IG G G V + +LP AV ++ + E
Sbjct: 26 YEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTE 85
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
+D FL E + + H N++ G + + IV E+++ G+L L+ +F
Sbjct: 86 KQRRD-FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG--QF 142
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NP 917
Q + +++G+A + YL VH D++++N+L++S VSDFG+++ + +P
Sbjct: 143 TVIQLVGMLRGIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP 199
Query: 918 HSSNWTAFAGTFG--YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSS 974
+ +T G + APE + T DV S+G++ EV+ G P +S
Sbjct: 200 EAV-YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--- 255
Query: 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
++I I + +RLP P MD + ++ + C + RP +++ +L K
Sbjct: 256 --DVIKAIEEG--YRLPAP----MDCPAGLHQLMLDCWQKERAERPKFEQIVGILDK 304
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+++ N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 239
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 21/270 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 81
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 82 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 136
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 137 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 192
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ + D+ S G+ +E+ G +P S + + F + +N+ P P
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNE------PPPKL 246
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ + CL+++P R +K++
Sbjct: 247 PSGVFSLEFQDFVNKCLIKNPAERADLKQL 276
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs
Length = 301
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 25/270 (9%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 65
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 66 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 120
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N F GT Y +PE
Sbjct: 121 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPE 176
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ + D+ S G+ +E+ G +PR ++ F ++ E P P
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAI-FELLDYIVNE---------PPPKL 226
Query: 996 DVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ + CL+++P R +K++
Sbjct: 227 PSAVFSLEFQDFVNKCLIKNPAERADLKQL 256
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 77
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+++GSL LK + K Q +++ +A+ ++Y+
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 236
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFE 260
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 117/281 (41%), Gaps = 28/281 (9%)
Query: 760 DFGE---KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
DF E + IG G G VY+A G AVK D + E +
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
+H NII G C + +V E+ G L +L + K + +N +A ++
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMN 119
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHE--------AHVSDFGIAKFLNPHSSNWTAFAGT 928
YLH + + PI+H D+ S N+L+ + E ++DFG+A+ H + + AG
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGA 177
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ + APE+ ++ DV S+GVL E++ G P + ++ + ++ +
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS 237
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P P +M+ C P +RP+ + + L
Sbjct: 238 TCPEPFAKLMED----------CWNPDPHSRPSFTNILDQL 268
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 57/304 (18%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMA--DQDEFLNEVLALTEIRHRNIIK 823
C+GKGR G V++ G AVK F+S+ DE + + E N V+ +RH NI+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVM----LRHENILG 95
Query: 824 FHGFCSNAQHS----FIVSEYLDRGSLTTILK----DDAAAKEFGWNQRMNVIKGVANAL 875
F ++HS ++++ Y + GSL L+ D + + ++ +A+ L
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC--------LRIVLSIASGL 147
Query: 876 SYLHHDCL-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA---- 926
++LH + P I H D+ SKN+L+ + ++D G+A ++ S+N
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPR 206
Query: 927 -GTFGYAAPEI------AHMMRATEKYDVHSFGVLALEV----IKGNHPRDY------VS 969
GT Y APE+ + ++ D+ +FG++ EV + DY V
Sbjct: 207 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 266
Query: 970 TNFSSFSNMITEINQNLDHRLP-TPSRDVMD-KLMSIMEVAILCLVESPEARPTMKKVCN 1027
N SF +M + +D + P P+R D L S+ ++ C ++P AR T ++
Sbjct: 267 PNDPSFEDMRKVV--CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 324
Query: 1028 LLCK 1031
L K
Sbjct: 325 TLTK 328
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 73
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 74 VVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVER---MNY 128
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 187 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 232
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 233 CPESLHDLMCQCWRKEPEERPTFE 256
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 69
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 70 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 124
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 183 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 228
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 229 CPESLHDLMCQCWRKDPEERPTFE 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 71
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 72 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 126
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 185 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 230
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 231 CPESLHDLMCQCWRKDPEERPTFE 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 239
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 24/266 (9%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ + AVK M+ Q FL E + ++H +++ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP----GTMSVQ-AFLEEANLMKTLQHDKLVRLYA 75
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++EY+ +GSL LK D K + ++ +A ++Y+
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERK---NY 131
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + NVL+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
K DV SFG+L E++ TN ++++T ++Q +R+P + D+L
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPYPGRTN----ADVMTALSQG--YRMPR-VENCPDELYD 242
Query: 1004 IMEVAILCLVESPEARPTMKKVCNLL 1029
IM+ +C E E RPT + ++L
Sbjct: 243 IMK---MCWKEKAEERPTFDYLQSVL 265
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A + SG + AVKK + + ++ NEV+ + + +H N+++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V E+L+ G+LT I+ +E Q V V ALS LH
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ---G 136
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL + +SDFG ++ GT + APE+ + +
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G++ +E++ G P
Sbjct: 197 VDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A + SG + AVKK + + ++ NEV+ + + +H N+++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V E+L+ G+LT I+ +E Q V V ALS LH
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ---G 140
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL + +SDFG ++ GT + APE+ + +
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G++ +E++ G P
Sbjct: 201 VDIWSLGIMVIEMVDGEPP 219
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A + SG + AVKK + + ++ NEV+ + + +H N+++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V E+L+ G+LT I+ +E Q V V ALS LH
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ---G 145
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL + +SDFG ++ GT + APE+ + +
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G++ +E++ G P
Sbjct: 206 VDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 767 IGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A + SG + AVKK + + ++ NEV+ + + +H N+++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
++V E+L+ G+LT I+ +E Q V V ALS LH
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ---G 147
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H DI S ++LL + +SDFG ++ GT + APE+ + +
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G++ +E++ G P
Sbjct: 208 VDIWSLGIMVIEMVDGEPP 226
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4858061 And Mgatp
Length = 307
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 131/272 (48%), Gaps = 19/272 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 117
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ + D+ S G+ +E+ G +P S M I + LD+ + P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPM--AIFELLDYIVNEPPP 231
Query: 996 DVMDKLMSI--MEVAILCLVESPEARPTMKKV 1025
+ + S+ + CL+++P R +K++
Sbjct: 232 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 263
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF +G G G V K + PSG+I A K + ++ + A +++ + E+ L E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECN 72
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
I+ F+G F S+ + S I E++D GSL +LK+ AK V V L+
Sbjct: 73 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLA 128
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YL I+H D+ N+L++S E + DFG++ L +N +F GT Y APE
Sbjct: 129 YLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPER 184
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D+ S G+ +E+ G +P
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 81 VVSE-EPIYIVCEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 239
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 22/227 (9%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+++F+ E + ++ H +++ +G C +V E+++ G L+ L+ F
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 103
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSN 921
+ + V ++YL ++H D++++N L+ VSDFG+ +F L+ ++
Sbjct: 104 TLLGMCLDVCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 160
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMIT 980
T +A+PE+ R + K DV SFGVL EV +G P + S S ++
Sbjct: 161 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVE 215
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAIL--CLVESPEARPTMKKV 1025
+I+ RL P +L S I+ C E PE RP ++
Sbjct: 216 DISTGF--RLYKP------RLASTHVYQIMNHCWKERPEDRPAFSRL 254
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 81 VVSE-EPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 239
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 57/304 (18%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMA--DQDEFLNEVLALTEIRHRNIIK 823
C+GKGR G V++ G AVK F+S+ DE + + E N V+ +RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVM----LRHENILG 66
Query: 824 FHGFCSNAQHS----FIVSEYLDRGSLTTILK----DDAAAKEFGWNQRMNVIKGVANAL 875
F ++HS ++++ Y + GSL L+ D + + ++ +A+ L
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC--------LRIVLSIASGL 118
Query: 876 SYLHHDCL-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA---- 926
++LH + P I H D+ SKN+L+ + ++D G+A ++ S+N
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPR 177
Query: 927 -GTFGYAAPEI------AHMMRATEKYDVHSFGVLALEV----IKGNHPRDY------VS 969
GT Y APE+ + ++ D+ +FG++ EV + DY V
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237
Query: 970 TNFSSFSNMITEINQNLDHRLPT-PSRDVMD-KLMSIMEVAILCLVESPEARPTMKKVCN 1027
N SF +M + +D + P P+R D L S+ ++ C ++P AR T ++
Sbjct: 238 PNDPSFEDMRKVV--CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
Query: 1028 LLCK 1031
L K
Sbjct: 296 TLTK 299
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 57/304 (18%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMA--DQDEFLNEVLALTEIRHRNIIK 823
C+GKGR G V++ G AVK F+S+ DE + + E N V+ +RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVM----LRHENILG 66
Query: 824 FHGFCSNAQHS----FIVSEYLDRGSLTTILK----DDAAAKEFGWNQRMNVIKGVANAL 875
F ++HS ++++ Y + GSL L+ D + + ++ +A+ L
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC--------LRIVLSIASGL 118
Query: 876 SYLHHDCL-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA---- 926
++LH + P I H D+ SKN+L+ + ++D G+A ++ S+N
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPR 177
Query: 927 -GTFGYAAPEI------AHMMRATEKYDVHSFGVLALEV----IKGNHPRDY------VS 969
GT Y APE+ + ++ D+ +FG++ EV + DY V
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237
Query: 970 TNFSSFSNMITEINQNLDHRLPT-PSRDVMD-KLMSIMEVAILCLVESPEARPTMKKVCN 1027
N SF +M + +D + P P+R D L S+ ++ C ++P AR T ++
Sbjct: 238 PNDPSFEDMRKVV--CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
Query: 1028 LLCK 1031
L K
Sbjct: 296 TLTK 299
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 20/267 (7%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G+ VY+A L G+ A+KK L D A D + E+ L ++ H N+IK++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKYY 98
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM----NVIKGVANALSYLHHD 881
IV E D G L+ ++K F +R+ V K S L H
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIK------HFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
++H DI NV + + + D G+ +F + ++ + GT Y +PE H
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 212
Query: 942 ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKL 1001
K D+ S G L E+ P N S I + + P PS ++L
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP-----PLPSDHYSEEL 267
Query: 1002 MSIMEVAILCLVESPEARPTMKKVCNL 1028
++ +C+ PE RP + V ++
Sbjct: 268 RQLVN---MCINPDPEKRPDVTYVYDV 291
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 117
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D+ S G+ +E+ G +P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 117
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D+ S G+ +E+ G +P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 22/287 (7%)
Query: 740 SSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFD 798
SS ++ + LY + + + F + IGKG G V+K + + + A+K + L +
Sbjct: 8 SSGVDLGTENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID---LEE 64
Query: 799 EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858
+ ++ E+ L++ + K++G +I+ EYL GS +L+ +
Sbjct: 65 AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE- 123
Query: 859 FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918
Q +++ + L YLH + +H DI + NVLL E ++DFG+A L
Sbjct: 124 ---TQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978
F GT + APE+ K D+ S G+ A+E+ +G P + F +
Sbjct: 178 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF--L 235
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
I + N PT + L +E CL + P RPT K++
Sbjct: 236 IPKNNP------PTLEGNYSKPLKEFVEA---CLNKEPSFRPTAKEL 273
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV+EY+ +G L LK + K Q +++ +A+ ++Y+
Sbjct: 81 VVSE-EPIYIVTEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 239
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 117
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D+ S G+ +E+ G +P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 117
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D+ S G+ +E+ G +P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 124
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 125 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 179
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 180 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 235
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D+ S G+ +E+ G +P
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DDF + +G G G V+K + PSG++ A K + ++ + A +++ + E+ L E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 89
Query: 818 HRNIIKFHG-FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ-RMNVIKGVANAL 875
I+ F+G F S+ + S I E++D GSL +LK E + + VIKG L
Sbjct: 90 SPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----L 144
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+YL I+H D+ N+L++S E + DFG++ L +N +F GT Y +PE
Sbjct: 145 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 200
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + D+ S G+ +E+ G +P
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 32/269 (11%)
Query: 767 IGKGRQGSVYKA-ELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G G G+VYK +P G I A+K N EF++E L + + H ++
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET---TGPKANVEFMDEALIMASMDHPHL 102
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
++ G C + +V++ + G L + + G +N +A + YL
Sbjct: 103 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER 159
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAHM 939
L VH D++++NVL+ S + ++DFG+A+ L + A G + A E H
Sbjct: 160 RL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRD 996
+ T + DV S+GV E++ G P D + T EI L+ RLP P
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---------EIPDLLEKGERLPQPPIC 267
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+D M V + C + ++RP K++
Sbjct: 268 TIDVYM----VMVKCWMIDADSRPKFKEL 292
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 32/269 (11%)
Query: 767 IGKGRQGSVYKA-ELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G G G+VYK +P G I A+K N EF++E L + + H ++
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET---TGPKANVEFMDEALIMASMDHPHL 79
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
++ G C + +V++ + G L + + G +N +A + YL
Sbjct: 80 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER 136
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAHM 939
L VH D++++NVL+ S + ++DFG+A+ L + A G + A E H
Sbjct: 137 RL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPSRD 996
+ T + DV S+GV E++ G P D + T EI L+ RLP P
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---------EIPDLLEKGERLPQPPIC 244
Query: 997 VMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+D M V + C + ++RP K++
Sbjct: 245 TIDVYM----VMVKCWMIDADSRPKFKEL 269
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
In Complex With Staurosporine
Length = 304
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 22/262 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V+K + + + A+K + L + + ++ E+ L++ + K++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G +I+ EYL GS +L+ + Q +++ + L YLH +
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHSE---K 124
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H DI + NVLL E ++DFG+A L F GT + APE+ K
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
D+ S G+ A+E+ +G P + F +I + N PT + L +
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNP------PTLEGNYSKPLKEFV 236
Query: 1006 EVAILCLVESPEARPTMKKVCN 1027
E CL + P RPT K++
Sbjct: 237 EA---CLNKEPSFRPTAKELLK 255
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 70
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + IV+EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 71 VVSE-EPIXIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVER---MNY 125
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + TA G + APE A R T
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEX--TARQGAKFPIKWTAPEAALYGRFT 183
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 184 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 229
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 230 CPESLHDLMCQCWRKEPEERPTFE 253
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV EY+ +G L LK + K Q +++ +A+ ++Y+
Sbjct: 81 VVSE-EPIYIVMEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + +TA G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 239
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
Length = 304
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 22/260 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V+K + + + A+K + L + + ++ E+ L++ + K++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G +I+ EYL GS +L+ + Q +++ + L YLH +
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHSE---K 124
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H DI + NVLL E ++DFG+A L F GT + APE+ K
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
D+ S G+ A+E+ +G P + F +I + N PT + L +
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNP------PTLEGNYSKPLKEFV 236
Query: 1006 EVAILCLVESPEARPTMKKV 1025
E CL + P RPT K++
Sbjct: 237 EA---CLNKEPSFRPTAKEL 253
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G V+ A+K + E FL E + ++RH +++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
S + +IV EY+ +GSL LK + K Q +++ +A+ ++Y+
Sbjct: 81 VVSE-EPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
VH D+ + N+L+ V+DFG+A+ + + TA G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEX--TARQGAKFPIKWTAPEAALYGRFT 193
Query: 944 EKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMIT-EINQNLD--HRLPTPSRDVMD 999
K DV SFG+L E+ KG P + M+ E+ ++ +R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP----E 239
Query: 1000 KLMSIMEVAILCLVESPEARPTMK 1023
S+ ++ C + PE RPT +
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 767 IGKGRQGSVYKAE------LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V+ AE ++ AVK L A + +F E LT ++H +
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL----AARKDFQREAELLTNLQHEH 78
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK---DDA----------AAKEFGWNQRMNV 867
I+KF+G C + +V EY+ G L L+ DA A E G +Q +++
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
+A+ + YL VH D++++N L+ + + DFG+++ + +S+++ G
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVGG 193
Query: 928 ----TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHP 964
+ PE + T + DV SFGV+ E+ G P
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 22/262 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G V+K + + + A+K + L + + ++ E+ L++ + K++
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G +I+ EYL GS +L+ + Q +++ + L YLH +
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHSE---K 139
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H DI + NVLL E ++DFG+A L F GT + APE+ K
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
D+ S G+ A+E+ +G P + F +I + N PT + L +
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLF--LIPKNNP------PTLEGNYSKPLKEFV 251
Query: 1006 EVAILCLVESPEARPTMKKVCN 1027
E CL + P RPT K++
Sbjct: 252 EA---CLNKEPSFRPTAKELLK 270
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 71
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A E SG AVK + + ++ NEV+ + + +H N+++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMD----LRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +++ E+L G+LT I+ +E Q V + V AL+YLH
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE----QIATVCEAVLQALAYLHAQ---G 161
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRATE 944
++H DI S ++LL + +SDFG ++ GT + APE I+ + ATE
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 945 KYDVHSFGVLALEVIKGNHP 964
D+ S G++ +E++ G P
Sbjct: 222 -VDIWSLGIMVIEMVDGEPP 240
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG+G G VYKA+ G FA+KK +L ++ + E+ L E++H NI+K +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILK------DDAAAKEFGWNQRMNVIKGVANALSYLHH 880
+ +V E+LD+ L +L + AK F + + N ++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSF--------LLQLLNGIAYCHD 118
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
++H D+ +N+L++ E E ++DFG+A+ +T T Y AP++ +
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV---L 172
Query: 941 RATEKY----DVHSFGVLALEVIKGN 962
++KY D+ S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 71
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 21 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 76
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 767 IGKGRQGSVYKAELPSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G G V+ + SG ++A+K L ++ D+ E L E+ H I+
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRVRTKMERDILVEVNHPFIV 90
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
K H +++ ++L G L T L + E + +A AL +LH
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALALDHLHS-- 145
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I++ D+ +N+LLD E ++DFG++K H +F GT Y APE+ +
Sbjct: 146 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
T+ D SFGVL E++ G P
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 767 IGKGRQGSVYKAELPSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G G V+ + SG ++A+K L ++ D+ E L E+ H I+
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRVRTKMERDILVEVNHPFIV 89
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
K H +++ ++L G L T L + E + +A AL +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALALDHLHS-- 144
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I++ D+ +N+LLD E ++DFG++K H +F GT Y APE+ +
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
T+ D SFGVL E++ G P
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLP 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 767 IGKGRQGSVYKAELPSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G G V+ + SG ++A+K L ++ D+ E L E+ H I+
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRVRTKMERDILVEVNHPFIV 89
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
K H +++ ++L G L T L + E + +A AL +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALALDHLHS-- 144
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I++ D+ +N+LLD E ++DFG++K H +F GT Y APE+ +
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
T+ D SFGVL E++ G P
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLP 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 27/205 (13%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG+G G VYKA+ G FA+KK +L ++ + E+ L E++H NI+K +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILK------DDAAAKEFGWNQRMNVIKGVANALSYLHH 880
+ +V E+LD+ L +L + AK F + + N ++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSF--------LLQLLNGIAYCHD 118
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
++H D+ +N+L++ E E ++DFG+A+ +T T Y AP++ +
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV---L 172
Query: 941 RATEKY----DVHSFGVLALEVIKG 961
++KY D+ S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 36 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 91
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 92 YSTKPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 18 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 73
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 74 YSTKPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 21 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 76
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 49/300 (16%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMA--DQDEFLNEVLALTEIRHRNIIK 823
C+GKGR G V++ L G AVK F+S+ DE + + E N VL +RH NI+
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSR---DEQSWFRETEIYNTVL----LRHDNILG 66
Query: 824 FHGFCSNAQHS----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
F +++S ++++ Y + GSL L+ + + A L++LH
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLH 122
Query: 880 HDCL-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-----GTF 929
+ P I H D S+NVL+ S + ++D G+A ++ S++ GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTK 181
Query: 930 GYAAPEIAHMMRATEKY------DVHSFGVLALE---------VIKGNHPRDY-VSTNFS 973
Y APE+ T+ + D+ +FG++ E +++ P Y V N
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDP 241
Query: 974 SFSNMITEINQNLDHRLPT-PSRDVMDKLMS-IMEVAILCLVESPEARPTMKKVCNLLCK 1031
SF +M + +D + PT P+R D ++S + ++ C +P AR T ++ L K
Sbjct: 242 SFEDMKKVV--CVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQK 299
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKG G V + G AVK + A FL E +T++RH N+++ G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 827 FCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +IV+EY+ +GSL L+ + G + + V A+ YL +
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---N 309
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
VH D++++NVL+ ++ A VSDFG+ K SS + APE + + K
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 946 YDVHSFGVLALEV 958
DV SFG+L E+
Sbjct: 367 SDVWSFGILLWEI 379
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 753 EIIKAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVL 811
E IK I +F E +G G V AE +G +FAVK + L + NE+
Sbjct: 18 EDIKKIFEFKET--LGTGAFSEVVLAEEKATGKLFAVKCIPKKAL---KGKESSIENEIA 72
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L +I+H NI+ + H ++V + + G L + + E +I+ V
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE---KDASTLIRQV 129
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+A+ YLH IVH D+ +N+L D E + +SDFG++K TA GT
Sbjct: 130 LDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA-CGT 185
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
GY APE+ ++ D S GV+A ++ G P
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 71
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 72 YSTAPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 99
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 43 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 98
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 99 YSTKPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKG G V + G AVK + A FL E +T++RH N+++ G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 827 FCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +IV+EY+ +GSL L+ + G + + V A+ YL +
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---N 122
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
VH D++++NVL+ ++ A VSDFG+ K SS + APE + + K
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 946 YDVHSFGVLALEV 958
DV SFG+L E+
Sbjct: 180 SDVWSFGILLWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKG G V + G AVK + A FL E +T++RH N+++ G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 827 FCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +IV+EY+ +GSL L+ + G + + V A+ YL +
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---N 137
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
VH D++++NVL+ ++ A VSDFG+ K SS + APE + + K
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 946 YDVHSFGVLALEV 958
DV SFG+L E+
Sbjct: 195 SDVWSFGILLWEI 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG+G G VYKA+ G FA+KK +L ++ + E+ L E++H NI+K +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILK------DDAAAKEFGWNQRMNVIKGVANALSYLHH 880
+ +V E+LD+ L +L + AK F + + N ++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSF--------LLQLLNGIAYCHD 118
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
++H D+ +N+L++ E E ++DFG+A+ +T T Y AP++ +
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV---L 172
Query: 941 RATEKY----DVHSFGVLALEVIKGN 962
++KY D+ S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IG G G+VYK + + AVK N + F NEV L + RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 99
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + Q + IV+++ + SL L +F + +++ + A + YLH I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA------FAGTFGYAAPEIAHMM 940
+H D+ S N+ L + + DFG+A S W+ +G+ + APE+ M
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 941 RATE---KYDVHSFGVLALEVIKGNHP 964
+ DV++FG++ E++ G P
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN-QLFGSIPLSFSNLSSLTLM 298
S + NL IL+L+ N+L G + L L +LDLS+N QL P +F L L +
Sbjct: 50 SFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTL 109
Query: 299 SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP 358
L L P L AL L L N L + + +L +L L+L+ N +
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPE 169
Query: 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418
+ L SL +L L +NH++ V PH+ +L +L+ + + N+L L + L SL+ L
Sbjct: 170 HAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYL 229
Query: 419 RFNQN 423
R N N
Sbjct: 230 RLNDN 234
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 288 SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYIN-QLDGVIPPSIGNLSSLRTL 346
SF + +LT++ L +N+L+G L L +L L N QL V P + L L TL
Sbjct: 50 SFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTL 109
Query: 347 YLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS---IGNLTKLVLVNMCENHLFG 403
+L G L P L +L L L N+L + ++ +GNLT L L N +
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHG---NRIPS 166
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
+ +FR L SL+RL +QN++ AF D L L L NNL
Sbjct: 167 VPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL 212
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 3/198 (1%)
Query: 324 LYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN-HLSGVIP 382
L+ N++ V S + +L L+L+ N G+ L L +L+L N L V P
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 383 HSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFL 442
+ L L +++ L L P FR L +L+ L NNL F D NLT L
Sbjct: 98 TTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHL 157
Query: 443 DLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502
L N + +R L N++ P D +L L L +N++ +P
Sbjct: 158 FLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL-SMLP 216
Query: 503 VQ-FEKLFSLNKLILNLN 519
+ L SL L LN N
Sbjct: 217 AEVLVPLRSLQYLRLNDN 234
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
++P I SS Q + L N I F+ +L L L+ N L+G F LT L
Sbjct: 24 AVPTGIPASS--QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLL 81
Query: 536 QYLDLSAN-KLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
+ LDLS N +L P + L LH L+L P F L L L L N LQ
Sbjct: 82 EQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ 141
Query: 595 G 595
Sbjct: 142 A 142
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 57/138 (41%)
Query: 214 PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFE 273
P L L L L + L+ P L+ L LYL N+L + +L +L
Sbjct: 97 PTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTH 156
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L L N++ +F L SL + L N ++ P +L L L L+ N L +
Sbjct: 157 LFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLP 216
Query: 334 PPSIGNLSSLRTLYLYDN 351
+ L SL+ L L DN
Sbjct: 217 AEVLVPLRSLQYLRLNDN 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 21/252 (8%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++ DF +G G G V+ +G +A+K +++ + + +E L L+
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSI 62
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ H II+ G +AQ F++ +Y++ G L ++L+ ++ F V AL
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR---KSQRFPNPVAKFYAAEVCLAL 119
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
YLH I++ D+ +N+LLD ++DFG AK++ P + GT Y APE
Sbjct: 120 EYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLCGTPDYIAPE 173
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP---- 991
+ + D SFG+L E++ G P Y S ++ ++ N + R P
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSNTMKTYEKIL-----NAELRFPPFFN 227
Query: 992 TPSRDVMDKLMS 1003
+D++ +L++
Sbjct: 228 EDVKDLLSRLIT 239
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 164/348 (47%), Gaps = 30/348 (8%)
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L+NL + N L P + NL L ++ ++ NQ+ PL+ NL++LT ++LFNN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNN 117
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
++ I P + NL L+ L L N + + ++ L+SL+ L N L P +
Sbjct: 118 QITD-IDPLK-NLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LAN 171
Query: 364 LKSLSKLELCRNHLSGV-IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQ 422
L +L +L++ N +S + + + NL L+ N N + + P LT+L+ L N
Sbjct: 172 LTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITPLGI--LTNLDELSLNG 226
Query: 423 NNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG 482
N L K NLT LDL+ N + KL N I +I P G
Sbjct: 227 NQL--KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQI-SNISPLAG 281
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSA 542
++ L L+L+ N + P+ L +L L L N +S P+ SLT+LQ L S
Sbjct: 282 LTA-LTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFSN 336
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
NK+S S+ NL+ +++L+ +NQ + P L +++L L+
Sbjct: 337 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 380
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 148/340 (43%), Gaps = 44/340 (12%)
Query: 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161
+L +N S N L P + NL+KL + + NNQ++ + P + +LT L L N +
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLN 221
PL+ L+ +N L L N S +L P + NL
Sbjct: 120 TDIDPLK--NLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LANLT 173
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP------------------- 262
+L LD+S N++ S LA L+NL L N + P
Sbjct: 174 TLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD 231
Query: 263 -SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSE 321
+ +L +L +LDL+ NQ+ PL S L+ LT + L N +S +I P G L AL+
Sbjct: 232 IGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NISPLAG-LTALTN 287
Query: 322 LGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVI 381
L L NQL+ + P I NL +L L LY N + P + L L +L N +S V
Sbjct: 288 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV- 342
Query: 382 PHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
S+ NLT + ++ N + L P NLT + +L N
Sbjct: 343 -SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 379
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 37/259 (14%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
+ YL +L+++ N L+ + P + NLTKLV + M N + + P NLT+L L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPE 480
N + + + NL L+LS N + +IS L + S N + P
Sbjct: 115 FNNQITD--IDPLKNLTNLNRLELSSNTI-SDISA-LSGLTSLQQLSFSSNQVTDLKP-- 168
Query: 481 IGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL------------- 527
+ + + L+ LD+SSN V I V KL +L LI NQ+S PL
Sbjct: 169 LANLTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITPLGILTNLDELSLNG 226
Query: 528 -------EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580
SLT L LDL+ N++S+ P + L+KL L L NQ ++ P L
Sbjct: 227 NQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 282
Query: 581 IHLSELDLSHNFLQGEIPP 599
L+ L+L+ N L+ +I P
Sbjct: 283 TALTNLELNENQLE-DISP 300
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 159/352 (45%), Gaps = 39/352 (11%)
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276
+ NL L + ++ NQ+ P LANL+NL L L+ N + P + NL +L L+L
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 136
Query: 277 SENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336
S N + S + S L+SL +S +N ++ P NL L L + N++ +
Sbjct: 137 SSNTI--SDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SV 190
Query: 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNM 396
+ L++L +L +N + P +G L +L +L L N L + ++ +LT L +++
Sbjct: 191 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 246
Query: 397 CENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEIS-- 454
N + L P LT L L+ N + LT L+L++N L +IS
Sbjct: 247 ANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLE-DISPI 301
Query: 455 FNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKL 514
N +N L + NNI P + +KLQ L S+N + L ++N L
Sbjct: 302 SNLKNLTYLTLY---FNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWL 354
Query: 515 ILNLNQLSGGVPLEFGSLTELQYLDLSAN---------KLSSSIPKSMGNLS 557
NQ+S PL +LT + L L+ K + SIP ++ N++
Sbjct: 355 SAGHNQISDLTPL--ANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVT 404
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG G VYK + + + A+K + L + + ++ E+ L++ I ++
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G + +I+ EYL GS +LK + + +++ + L YLH +
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETY----IATILREILKGLDYLHSERK-- 137
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
+H DI + NVLL + + ++DFG+A L F GT + APE+ K
Sbjct: 138 -IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G+ A+E+ KG P
Sbjct: 197 ADIWSLGITAIELAKGEPP 215
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
Length = 344
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
+ +LA+ + H +I++ G C + +V++YL GSL ++ A G +N
Sbjct: 82 DHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNW 138
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAF 925
+A + YL + VH +++++NVLL S + V+DFG+A L P ++
Sbjct: 139 GVQIAKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 195
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ A E H + T + DV S+GV E++ G P Y + +++ +
Sbjct: 196 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP--YAGLRLAEVPDLLEK--- 250
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
RL P +D M V + C + RPT K++ N
Sbjct: 251 --GERLAQPQICTIDVYM----VMVKCWMIDENIRPTFKELAN 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 24/266 (9%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G+ G V+ + AVK M+ Q FL E + ++H +++ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP----GTMSVQ-AFLEEANLMKTLQHDKLVRLYA 74
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
+ + +I++E++ +GSL LK D K + ++ +A ++Y+
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERK---NY 130
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRAT 943
+H D+ + NVL+ ++DFG+A+ + + +TA G + APE + T
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 944 EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
K +V SFG+L E++ TN +++++ ++Q +R+P + D+L
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPYPGRTN----ADVMSALSQG--YRMPR-MENCPDELYD 241
Query: 1004 IMEVAILCLVESPEARPTMKKVCNLL 1029
IM+ +C E E RPT + ++L
Sbjct: 242 IMK---MCWKEKAEERPTFDYLQSVL 264
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 39/280 (13%)
Query: 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNI 821
E G G++ +V K AVK S DE ++ ++E+ ++ + +H NI
Sbjct: 56 EATAFGLGKEDAVLKV--------AVKMLKSTAHADE---KEALMSELKIMSHLGQHENI 104
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAA---KEFG----WNQRMNVIKGVANA 874
+ G C++ +++EY G L L+ A A KE G ++ VA
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 875 LSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FG 930
+++L +C +H D++++NVLL + H A + DFG+A+ + + SN+
Sbjct: 165 MAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVK 219
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989
+ APE T + DV S+G+L E+ G +P + N S F ++ + ++
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLVKD-----GYQ 273
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ P+ + SIM+ C P RPT +++C+ L
Sbjct: 274 MAQPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 309
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 39/280 (13%)
Query: 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNI 821
E G G++ +V K AVK S DE ++ ++E+ ++ + +H NI
Sbjct: 64 EATAFGLGKEDAVLKV--------AVKMLKSTAHADE---KEALMSELKIMSHLGQHENI 112
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAA---KEFG----WNQRMNVIKGVANA 874
+ G C++ +++EY G L L+ A A KE G ++ VA
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 875 LSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FG 930
+++L +C +H D++++NVLL + H A + DFG+A+ + + SN+
Sbjct: 173 MAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVK 227
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989
+ APE T + DV S+G+L E+ G +P + N S F ++ + ++
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLVKD-----GYQ 281
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ P+ + SIM+ C P RPT +++C+ L
Sbjct: 282 MAQPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 317
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKG G V + G AVK + A FL E +T++RH N+++ G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 827 FCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +IV+EY+ +GSL L+ + G + + V A+ YL +
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---N 128
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
VH D++++NVL+ ++ A VSDFG+ K SS + APE + K
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 946 YDVHSFGVLALEV 958
DV SFG+L E+
Sbjct: 186 SDVWSFGILLWEI 198
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 15/248 (6%)
Query: 760 DFGEKYCIGKGRQGSV----YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
DF IGKG G V +KAE + +AVK + + + ++ + L
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAE---EVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
++H ++ H A + V +Y++ G L L+ + F + +A+AL
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC---FLEPRARFYAAEIASAL 152
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
YLH IV+ D+ +N+LLDS+ ++DFG+ K H+S + F GT Y APE
Sbjct: 153 GYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE 209
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995
+ H D G + E++ G P + S N + + I L + +R
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPP--FYSRNTAEMYDNILNKPLQLKPNITNSAR 267
Query: 996 DVMDKLMS 1003
+++ L+
Sbjct: 268 HLLEGLLQ 275
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 47/287 (16%)
Query: 764 KYCIGKGRQGSVYKAE----LPS--GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
K+ +G+G G V+ AE LP ++ AVK E A QD F E LT ++
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQD-FQREAELLTMLQ 78
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------------DDAAAKEFGWNQRM 865
H++I++F G C+ + +V EY+ G L L+ +D A G Q +
Sbjct: 79 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 866 NVIKGVANALSYLH--HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923
V VA + YL H VH D++++N L+ + DFG+++ + +S+++
Sbjct: 139 AVASQVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYY 191
Query: 924 AFAG----TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
G + PE + T + DV SFGV+ E+ G P +S +
Sbjct: 192 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-----TEA 246
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
I I Q + P R ++ +IM C P+ R ++K V
Sbjct: 247 IDCITQGRELERP---RACPPEVYAIMRG---CWQREPQQRHSIKDV 287
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 47/287 (16%)
Query: 764 KYCIGKGRQGSVYKAE----LPS--GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
K+ +G+G G V+ AE LP ++ AVK E A QD F E LT ++
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQD-FQREAELLTMLQ 72
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------------DDAAAKEFGWNQRM 865
H++I++F G C+ + +V EY+ G L L+ +D A G Q +
Sbjct: 73 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 866 NVIKGVANALSYLH--HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923
V VA + YL H VH D++++N L+ + DFG+++ + +S+++
Sbjct: 133 AVASQVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYY 185
Query: 924 AFAG----TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
G + PE + T + DV SFGV+ E+ G P +S +
Sbjct: 186 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-----TEA 240
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
I I Q + P R ++ +IM C P+ R ++K V
Sbjct: 241 IDCITQGRELERP---RACPPEVYAIMRG---CWQREPQQRHSIKDV 281
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 47/287 (16%)
Query: 764 KYCIGKGRQGSVYKAE----LPS--GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
K+ +G+G G V+ AE LP ++ AVK E A QD F E LT ++
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQD-FQREAELLTMLQ 101
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------------DDAAAKEFGWNQRM 865
H++I++F G C+ + +V EY+ G L L+ +D A G Q +
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 866 NVIKGVANALSYLH--HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923
V VA + YL H VH D++++N L+ + DFG+++ + +S+++
Sbjct: 162 AVASQVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYY 214
Query: 924 AFAG----TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
G + PE + T + DV SFGV+ E+ G P +S +
Sbjct: 215 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-----TEA 269
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
I I Q + P R ++ +IM C P+ R ++K V
Sbjct: 270 IDCITQGRELERP---RACPPEVYAIMRG---CWQREPQQRHSIKDV 310
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQ-DEFLNEVLALTEIRHRNIIKFH 825
IG G G+VYK + + + K + D +Q F NEV L + RH NI+ F
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILK-----VVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G+ + + IV+++ + SL L +F Q +++ + A + YLH
Sbjct: 99 GYMTKDNLA-IVTQWCEGSSLYKHL--HVQETKFQMFQLIDIARQTAQGMDYLH---AKN 152
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF------AGTFGYAAPEIAHM 939
I+H D+ S N+ L + DFG+A S W+ G+ + APE+ M
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 940 MRATE---KYDVHSFGVLALEVIKGNHPRDYV 968
+ DV+S+G++ E++ G P ++
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 24/220 (10%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
E+ L RH +IIK + S F+V EY+ G L + +E + +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLF 117
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+ + +A+ Y H +VH D+ +NVLLD+ A ++DFG++ ++ T+ G+
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS-CGS 173
Query: 929 FGYAAPE-IAHMMRATEKYDVHSFGVLALEVIKGNHPRD--YVSTNFSSFSNMITEINQN 985
YAAPE I+ + A + D+ S GV+ ++ G P D +V T F + I +
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY 233
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
L+ R V LM +++V P R T+K +
Sbjct: 234 LN-------RSVATLLMHMLQV-------DPLKRATIKDI 259
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
Length = 341
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 25/263 (9%)
Query: 767 IGKGRQGSVYKAE--LPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G G V + E PSG + AVK +L A D+F+ EV A+ + HRN+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 78
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ +G +V+E GSL L+ G R V VA + YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 134
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG---TFGYAAPEIAHM 939
+H D++++N+LL + + DFG+ + L + ++ F + APE
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
+ D FGV E+ G P ++ N S + I + + RLP P
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPE---- 242
Query: 999 DKLMSIMEVAILCLVESPEARPT 1021
D I V + C PE RPT
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 25/263 (9%)
Query: 767 IGKGRQGSVYKAE--LPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G G V + E PSG + AVK +L A D+F+ EV A+ + HRN+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 78
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ +G +V+E GSL L+ G R V VA + YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 134
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG---TFGYAAPEIAHM 939
+H D++++N+LL + + DFG+ + L + ++ F + APE
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
+ D FGV E+ G P ++ N S + I + + RLP P
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPE---- 242
Query: 999 DKLMSIMEVAILCLVESPEARPT 1021
D I V + C PE RPT
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 25/263 (9%)
Query: 767 IGKGRQGSVYKAE--LPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G G V + E PSG + AVK +L A D+F+ EV A+ + HRN+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 74
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ +G +V+E GSL L+ G R V VA + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG---TFGYAAPEIAHM 939
+H D++++N+LL + + DFG+ + L + ++ F + APE
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
+ D FGV E+ G P ++ N S + I + + RLP P
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPE---- 238
Query: 999 DKLMSIMEVAILCLVESPEARPT 1021
D I V + C PE RPT
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 25/263 (9%)
Query: 767 IGKGRQGSVYKAE--LPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G G V + E PSG + AVK +L A D+F+ EV A+ + HRN+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 84
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ +G +V+E GSL L+ G R V VA + YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 140
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG---TFGYAAPEIAHM 939
+H D++++N+LL + + DFG+ + L + ++ F + APE
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
+ D FGV E+ G P ++ N S + I + + RLP P
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPE---- 248
Query: 999 DKLMSIMEVAILCLVESPEARPT 1021
D I V + C PE RPT
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 25/263 (9%)
Query: 767 IGKGRQGSVYKAE--LPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G G V + E PSG + AVK +L A D+F+ EV A+ + HRN+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 74
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ +G +V+E GSL L+ G R V VA + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG---TFGYAAPEIAHM 939
+H D++++N+LL + + DFG+ + L + ++ F + APE
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
+ D FGV E+ G P ++ N S + I + + RLP P
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPE---- 238
Query: 999 DKLMSIMEVAILCLVESPEARPT 1021
D I V + C PE RPT
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
+ +LA+ + H +I++ G C + +V++YL GSL ++ A G +N
Sbjct: 64 DHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNW 120
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAF 925
+A + YL + VH +++++NVLL S + V+DFG+A L P ++
Sbjct: 121 GVQIAKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 177
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ A E H + T + DV S+GV E++ G P Y + +++ +
Sbjct: 178 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP--YAGLRLAEVPDLLEK--- 232
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027
RL P +D M V + C + RPT K++ N
Sbjct: 233 --GERLAQPQICTIDVYM----VMVKCWMIDENIRPTFKELAN 269
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 108/263 (41%), Gaps = 25/263 (9%)
Query: 767 IGKGRQGSVYKAE--LPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G G V + E PSG + AVK +L A D+F+ EV A+ + HRN+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 84
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ +G +V+E GSL L+ G R V VA + YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 140
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL---NPHSSNWTAFAGTFGYAAPEIAHM 939
+H D++++N+LL + + DFG+ + L + H F + APE
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
+ D FGV E+ G P ++ N S + I + + RLP P
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPE---- 248
Query: 999 DKLMSIMEVAILCLVESPEARPT 1021
D I V + C PE RPT
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 108/263 (41%), Gaps = 25/263 (9%)
Query: 767 IGKGRQGSVYKAE--LPSG--IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G G G V + E PSG + AVK +L A D+F+ EV A+ + HRN+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 74
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ +G +V+E GSL L+ G R V VA + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL---NPHSSNWTAFAGTFGYAAPEIAHM 939
+H D++++N+LL + + DFG+ + L + H F + APE
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 940 MRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVM 998
+ D FGV E+ G P ++ N S + I + + RLP P
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE----RLPRPE---- 238
Query: 999 DKLMSIMEVAILCLVESPEARPT 1021
D I V + C PE RPT
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 163/348 (46%), Gaps = 30/348 (8%)
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L+NL + N L P + NL L ++ ++ NQ+ PL+ NL++LT ++LFNN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNN 117
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
++ I P + NL L+ L L N + + ++ L+SL+ L N L P +
Sbjct: 118 QIT-DIDPLK-NLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LAN 171
Query: 364 LKSLSKLELCRNHLSGV-IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQ 422
L +L +L++ N +S + + + NL L+ N N + + P LT+L+ L N
Sbjct: 172 LTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITPLGI--LTNLDELSLNG 226
Query: 423 NNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG 482
N L K NLT LDL+ N + KL N I +I P G
Sbjct: 227 NQL--KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQI-SNISPLAG 281
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSA 542
++ L L+L+ N + P+ L +L L L N +S P+ SLT+LQ L
Sbjct: 282 LTA-LTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFYN 336
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
NK+S S+ NL+ +++L+ +NQ + P L +++L L+
Sbjct: 337 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 380
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 147/340 (43%), Gaps = 44/340 (12%)
Query: 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161
+L +N S N L P + NL+KL + + NNQ++ + P + +LT L L N +
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLN 221
PL+ L+ +N L L N S +L P + NL
Sbjct: 120 TDIDPLK--NLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LANLT 173
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP------------------- 262
+L LD+S N++ S LA L+NL L N + P
Sbjct: 174 TLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD 231
Query: 263 -SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSE 321
+ +L +L +LDL+ NQ+ PL S L+ LT + L N +S I P G L AL+
Sbjct: 232 IGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISN-ISPLAG-LTALTN 287
Query: 322 LGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVI 381
L L NQL+ + P I NL +L L LY N + P + L L +L N +S V
Sbjct: 288 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV- 342
Query: 382 PHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
S+ NLT + ++ N + L P NLT + +L N
Sbjct: 343 -SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 379
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 37/259 (14%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
+ YL +L+++ N L+ + P + NLTKLV + M N + + P NLT+L L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPE 480
N + + + NL L+LS N + +IS L + S N + P
Sbjct: 115 FNNQITD--IDPLKNLTNLNRLELSSNTI-SDISA-LSGLTSLQQLSFSSNQVTDLKP-- 168
Query: 481 IGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL------------- 527
+ + + L+ LD+SSN V I V KL +L LI NQ+S PL
Sbjct: 169 LANLTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITPLGILTNLDELSLNG 226
Query: 528 -------EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580
SLT L LDL+ N++S+ P + L+KL L L NQ ++ P L
Sbjct: 227 NQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 282
Query: 581 IHLSELDLSHNFLQGEIPP 599
L+ L+L+ N L+ +I P
Sbjct: 283 TALTNLELNENQLE-DISP 300
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 38/254 (14%)
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP-------------- 262
+ NL L + ++ NQ+ P LANL+NL L L+ N + P
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSS 138
Query: 263 ------SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG-SIPPTQGN 315
S + L SL +L S NQ+ PL +NL++L + + +N +S S+ N
Sbjct: 139 NTISDISALSGLTSLQQLSFSSNQVTDLKPL--ANLTTLERLDISSNKVSDISVLAKLTN 196
Query: 316 LEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN 375
LE+L NQ+ + P +G L++L L L N + + L +L+ L+L N
Sbjct: 197 LESLIATN---NQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANN 249
Query: 376 HLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGD 435
+S + P S LTKL + + N + + P LT+L L N+N L + +
Sbjct: 250 QISNLAPLS--GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL--EDISPISN 303
Query: 436 HPNLTFLDLSQNNL 449
NLT+L L NN+
Sbjct: 304 LKNLTYLTLYFNNI 317
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 163/348 (46%), Gaps = 30/348 (8%)
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L+NL + N L P + NL L ++ ++ NQ+ PL+ NL++LT ++LFNN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNN 117
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
++ I P + NL L+ L L N + + ++ L+SL+ L N L P +
Sbjct: 118 QIT-DIDPLK-NLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP--LAN 171
Query: 364 LKSLSKLELCRNHLSGV-IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQ 422
L +L +L++ N +S + + + NL L+ N N + + P LT+L+ L N
Sbjct: 172 LTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITPLGI--LTNLDELSLNG 226
Query: 423 NNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG 482
N L K NLT LDL+ N + KL N I +I P G
Sbjct: 227 NQL--KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQI-SNISPLAG 281
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSA 542
++ L L+L+ N + P+ L +L L L N +S P+ SLT+LQ L
Sbjct: 282 LTA-LTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFYN 336
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
NK+S S+ NL+ +++L+ +NQ + P L +++L L+
Sbjct: 337 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 380
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 148/340 (43%), Gaps = 44/340 (12%)
Query: 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161
+L +N S N L P + NL+KL + + NNQ++ + P + +LT L L N +
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLN 221
PL+ L+ +N L L N S +L P + NL
Sbjct: 120 TDIDPLK--NLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP--LANLT 173
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP------------------- 262
+L LD+S N++ S LA L+NL L N + P
Sbjct: 174 TLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD 231
Query: 263 -SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSE 321
+ +L +L +LDL+ NQ+ PL S L+ LT + L N +S +I P G L AL+
Sbjct: 232 IGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NISPLAG-LTALTN 287
Query: 322 LGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVI 381
L L NQL+ + P I NL +L L LY N + P + L L +L N +S V
Sbjct: 288 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV- 342
Query: 382 PHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
S+ NLT + ++ N + L P NLT + +L N
Sbjct: 343 -SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 379
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 37/259 (14%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
+ YL +L+++ N L+ + P + NLTKLV + M N + + P NLT+L L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPE 480
N + + + NL L+LS N + +IS L N S N + P
Sbjct: 115 FNNQITD--IDPLKNLTNLNRLELSSNTI-SDISA-LSGLTSLQQLNFSSNQVTDLKP-- 168
Query: 481 IGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL------------- 527
+ + + L+ LD+SSN V I V KL +L LI NQ+S PL
Sbjct: 169 LANLTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITPLGILTNLDELSLNG 226
Query: 528 -------EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580
SLT L LDL+ N++S+ P + L+KL L L NQ ++ P L
Sbjct: 227 NQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 282
Query: 581 IHLSELDLSHNFLQGEIPP 599
L+ L+L+ N L+ +I P
Sbjct: 283 TALTNLELNENQLE-DISP 300
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 38/254 (14%)
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP-------------- 262
+ NL L + ++ NQ+ P LANL+NL L L+ N + P
Sbjct: 81 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSS 138
Query: 263 ------SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG-SIPPTQGN 315
S + L SL +L+ S NQ+ PL +NL++L + + +N +S S+ N
Sbjct: 139 NTISDISALSGLTSLQQLNFSSNQVTDLKPL--ANLTTLERLDISSNKVSDISVLAKLTN 196
Query: 316 LEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN 375
LE+L NQ+ + P +G L++L L L N + + L +L+ L+L N
Sbjct: 197 LESLIATN---NQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANN 249
Query: 376 HLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGD 435
+S + P + LTKL + + N + + P LT+L L N+N L + +
Sbjct: 250 QISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL--EDISPISN 303
Query: 436 HPNLTFLDLSQNNL 449
NLT+L L NN+
Sbjct: 304 LKNLTYLTLYFNNI 317
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 165/348 (47%), Gaps = 31/348 (8%)
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L+NL + N L P + NL L ++ ++ NQ+ PL+ NL++LT ++LFNN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNN 117
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
++ I P + NL L+ L L N + + ++ L+SL+ L + N L P +
Sbjct: 118 QIT-DIDPLK-NLTNLNRLELSSNTISDI--SALSGLTSLQQLN-FGNQVTDLKP--LAN 170
Query: 364 LKSLSKLELCRNHLSGV-IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQ 422
L +L +L++ N +S + + + NL L+ N N + + P LT+L+ L N
Sbjct: 171 LTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITPLGI--LTNLDELSLNG 225
Query: 423 NNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG 482
N L K NLT LDL+ N + KL N I +I P G
Sbjct: 226 NQL--KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQI-SNISPLAG 280
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSA 542
++ L L+L+ N + P+ L +L L L N +S P+ SLT+LQ L S
Sbjct: 281 LTA-LTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFSN 335
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
NK+S S+ NL+ +++L+ +NQ + P L +++L L+
Sbjct: 336 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 379
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 151/343 (44%), Gaps = 51/343 (14%)
Query: 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161
+L +N S N L P + NL+KL + + NNQ++ + P + +LT L L N +
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGS-IPNV--MG 218
PL+ L+ +N L L N S FG+ + ++ +
Sbjct: 120 TDIDPLK--NLTNLNRLELSSNTISD--------ISALSGLTSLQQLNFGNQVTDLKPLA 169
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP---------------- 262
NL +L LD+S N++ S LA L+NL L N + P
Sbjct: 170 NLTTLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 227
Query: 263 ----SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA 318
+ +L +L +LDL+ NQ+ PL S L+ LT + L N +S +I P G L A
Sbjct: 228 LKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NISPLAG-LTA 283
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L+ L L NQL+ + P I NL +L L LY N + P + L L +L N +S
Sbjct: 284 LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVS 339
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
V S+ NLT + ++ N + L P NLT + +L N
Sbjct: 340 DV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 378
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 116/265 (43%), Gaps = 50/265 (18%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
+ YL +L+++ N L+ + P + NLTKLV + M N + + P NLT+L L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNN------LYGEISFNWRNFPKLGTFNASMNNIY 474
N + + + NL L+LS N L G S NF N
Sbjct: 115 FNNQITD--IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNF----------GNQV 162
Query: 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL------- 527
+ P + + + L+ LD+SSN V I V KL +L LI NQ+S PL
Sbjct: 163 TDLKP-LANLTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITPLGILTNLD 219
Query: 528 -------------EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP 574
SLT L LDL+ N++S+ P + L+KL L L NQ ++ P
Sbjct: 220 ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 277
Query: 575 TEFEKLIHLSELDLSHNFLQGEIPP 599
L L+ L+L+ N L+ +I P
Sbjct: 278 --LAGLTALTNLELNENQLE-DISP 299
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 767 IGKGRQGSVY---KAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G G V+ K P SG ++A+K L ++ D+ E L ++ H ++
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATL--KVRDRVRTKMERDILADVNHPFVV 93
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
K H +++ ++L G L T L + E + +A L +LH
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYLAELALGLDHLHS-- 148
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I++ D+ +N+LLD E ++DFG++K H +F GT Y APE+ +
Sbjct: 149 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGH 207
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
+ D S+GVL E++ G+ P
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLP 229
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 12/241 (4%)
Query: 767 IGKGRQGSVYKAELPSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+GKG G V++ +G IFA+K ++ D E L E++H I+
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+++ EYL G L L+ + F + + ++ AL +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMALGHLHQKG 141
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I++ D+ +N++L+ + ++DFG+ K + F GT Y APEI
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 943 TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
D S G L +++ G P + N + I + NL L +RD++ KL+
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPP--FTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLL 256
Query: 1003 S 1003
Sbjct: 257 K 257
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 13/216 (6%)
Query: 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQL-LFDEMADQDEFLNEV 810
+I I+DF +GKG G V+ AE + FA+K + L D+ + V
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 811 LALTEIRHRNIIKFHGFCS--NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
L+L H + H FC+ ++ F V EYL+ G L ++ + +F ++
Sbjct: 72 LSLA-WEHPFLT--HMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYA 125
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+ L +LH IV+ D+ N+LLD + ++DFG+ K + F GT
Sbjct: 126 AEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGT 182
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
Y APEI + D SFGVL E++ G P
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 12/241 (4%)
Query: 767 IGKGRQGSVYKAELPSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+GKG G V++ +G IFA+K ++ D E L E++H I+
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+++ EYL G L L+ + F + + ++ AL +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMALGHLHQKG 141
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
I++ D+ +N++L+ + ++DFG+ K + F GT Y APEI
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 943 TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
D S G L +++ G P + N + I + NL L +RD++ KL+
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPP--FTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLL 256
Query: 1003 S 1003
Sbjct: 257 K 257
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 58/254 (22%)
Query: 726 GP--KATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKY----CIGK----GRQGSV 775
GP K +D D + F VL G + E+I A D +K CI K G++GS+
Sbjct: 7 GPRWKQAEDIRDIYDFRDVL---GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 776 YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835
NE+ L +I+H NI+ + H +
Sbjct: 64 E-------------------------------NEIAVLHKIKHPNIVALDDIYESGGHLY 92
Query: 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQR--MNVIKGVANALSYLHHDCLPPIVHGDISS 893
++ + + G L D K F + +R +I V +A+ YLH IVH D+
Sbjct: 93 LIMQLVSGGELF----DRIVEKGF-YTERDASRLIFQVLDAVKYLHD---LGIVHRDLKP 144
Query: 894 KNVL---LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHS 950
+N+L LD + + +SDFG++K +P S TA GT GY APE+ ++ D S
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWS 203
Query: 951 FGVLALEVIKGNHP 964
GV+A ++ G P
Sbjct: 204 IGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 58/254 (22%)
Query: 726 GP--KATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKY----CIGK----GRQGSV 775
GP K +D D + F VL G + E+I A D +K CI K G++GS+
Sbjct: 7 GPRWKQAEDIRDIYDFRDVL---GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 776 YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835
NE+ L +I+H NI+ + H +
Sbjct: 64 E-------------------------------NEIAVLHKIKHPNIVALDDIYESGGHLY 92
Query: 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQR--MNVIKGVANALSYLHHDCLPPIVHGDISS 893
++ + + G L D K F + +R +I V +A+ YLH IVH D+
Sbjct: 93 LIMQLVSGGELF----DRIVEKGF-YTERDASRLIFQVLDAVKYLHD---LGIVHRDLKP 144
Query: 894 KNVL---LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHS 950
+N+L LD + + +SDFG++K +P S TA GT GY APE+ ++ D S
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWS 203
Query: 951 FGVLALEVIKGNHP 964
GV+A ++ G P
Sbjct: 204 IGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 58/254 (22%)
Query: 726 GP--KATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKY----CIGK----GRQGSV 775
GP K +D D + F VL G + E+I A D +K CI K G++GS+
Sbjct: 7 GPRWKQAEDIRDIYDFRDVL---GTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 776 YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835
NE+ L +I+H NI+ + H +
Sbjct: 64 E-------------------------------NEIAVLHKIKHPNIVALDDIYESGGHLY 92
Query: 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQR--MNVIKGVANALSYLHHDCLPPIVHGDISS 893
++ + + G L D K F + +R +I V +A+ YLH IVH D+
Sbjct: 93 LIMQLVSGGELF----DRIVEKGF-YTERDASRLIFQVLDAVKYLHD---LGIVHRDLKP 144
Query: 894 KNVL---LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHS 950
+N+L LD + + +SDFG++K +P S TA GT GY APE+ ++ D S
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWS 203
Query: 951 FGVLALEVIKGNHP 964
GV+A ++ G P
Sbjct: 204 IGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 58/254 (22%)
Query: 726 GP--KATDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKY----CIGK----GRQGSV 775
GP K +D D + F VL G + E+I A D +K CI K G++GS+
Sbjct: 7 GPRWKQAEDIRDIYDFRDVL---GTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSM 63
Query: 776 YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835
NE+ L +I+H NI+ + H +
Sbjct: 64 E-------------------------------NEIAVLHKIKHPNIVALDDIYESGGHLY 92
Query: 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQR--MNVIKGVANALSYLHHDCLPPIVHGDISS 893
++ + + G L D K F + +R +I V +A+ YLH IVH D+
Sbjct: 93 LIMQLVSGGELF----DRIVEKGF-YTERDASRLIFQVLDAVKYLHD---LGIVHRDLKP 144
Query: 894 KNVL---LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHS 950
+N+L LD + + +SDFG++K +P S TA GT GY APE+ ++ D S
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWS 203
Query: 951 FGVLALEVIKGNHP 964
GV+A ++ G P
Sbjct: 204 IGVIAYILLCGYPP 217
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 15/228 (6%)
Query: 743 LNFNGKFLYEEIIKAI--DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDE 799
L F G ++ + AI D + + +GKG G V + +G AVK + + + +
Sbjct: 14 LYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV-KQ 72
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
D++ L EV L ++ H NI+K + F + + ++V E G L + + K F
Sbjct: 73 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRF 129
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLN 916
+I+ V + ++Y+H + IVH D+ +N+LL+S+ + + DFG++
Sbjct: 130 SEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186
Query: 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
S GT Y APE+ H EK DV S GV+ ++ G P
Sbjct: 187 A-SKKMKDKIGTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPP 232
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 13/216 (6%)
Query: 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQL-LFDEMADQDEFLNEV 810
+I I+DF +GKG G V+ AE + FA+K + L D+ + V
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 811 LALTEIRHRNIIKFHGFCS--NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
L+L H + H FC+ ++ F V EYL+ G L ++ + +F ++
Sbjct: 71 LSLA-WEHPFLT--HMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYA 124
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+ L +LH IV+ D+ N+LLD + ++DFG+ K + F GT
Sbjct: 125 AEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGT 181
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
Y APEI + D SFGVL E++ G P
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 798 DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
++ A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K
Sbjct: 51 NDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVK 109
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L
Sbjct: 110 D---KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 163
Query: 918 HSSNWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTN 971
+ + A T G + APE + + + K DV SFGVL E G P Y
Sbjct: 164 DENXYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMK 219
Query: 972 FSSFSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S + M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 220 GSEVTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 264
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
E+ L RH +IIK + S F+V EY+ G L + +E + +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLF 117
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+ + +A+ Y H +VH D+ +NVLLD+ A ++DFG++ ++ G+
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGS 173
Query: 929 FGYAAPE-IAHMMRATEKYDVHSFGVLALEVIKGNHPRD--YVSTNFSSFSNMITEINQN 985
YAAPE I+ + A + D+ S GV+ ++ G P D +V T F + I +
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY 233
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
L+ R V LM +++V P R T+K +
Sbjct: 234 LN-------RSVATLLMHMLQV-------DPLKRATIKDI 259
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 151/343 (44%), Gaps = 51/343 (14%)
Query: 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161
+L +N S N L P + NL+KL + + NNQ++ + P + +LT L L N +
Sbjct: 68 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 123
Query: 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGS-IPNV--MG 218
PL+ L+ +N L L N S FG+ + ++ +
Sbjct: 124 TDIDPLK--NLTNLNRLELSSNTISD--------ISALSGLTSLQQLSFGNQVTDLKPLA 173
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP---------------- 262
NL +L LD+S N++ S LA L+NL L N + P
Sbjct: 174 NLTTLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 231
Query: 263 ----SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA 318
+ +L +L +LDL+ NQ+ PL S L+ LT + L N +S +I P G L A
Sbjct: 232 LKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NISPLAG-LTA 287
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L+ L L NQL+ + P I NL +L L LY N + P + L L +L N +S
Sbjct: 288 LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVS 343
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
V S+ NLT + ++ N + L P NLT + +L N
Sbjct: 344 DV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 382
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 165/348 (47%), Gaps = 31/348 (8%)
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L+NL + N L P + NL L ++ ++ NQ+ PL+ NL++LT ++LFNN
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNN 121
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
++ I P + NL L+ L L N + + ++ L+SL+ L + N L P +
Sbjct: 122 QIT-DIDPLK-NLTNLNRLELSSNTISDI--SALSGLTSLQQLS-FGNQVTDLKP--LAN 174
Query: 364 LKSLSKLELCRNHLSGV-IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQ 422
L +L +L++ N +S + + + NL L+ N N + + P LT+L+ L N
Sbjct: 175 LTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITPLGI--LTNLDELSLNG 229
Query: 423 NNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG 482
N L K NLT LDL+ N + KL N I +I P G
Sbjct: 230 NQL--KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQI-SNISPLAG 284
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSA 542
++ L L+L+ N + P+ L +L L L N +S P+ SLT+LQ L +
Sbjct: 285 LTA-LTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFAN 339
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
NK+S S+ NL+ +++L+ +NQ + P L +++L L+
Sbjct: 340 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 383
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 118/260 (45%), Gaps = 40/260 (15%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
+ YL +L+++ N L+ + P + NLTKLV + M N + + P NLT+L L
Sbjct: 63 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 118
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNA-SMNNIYGSIPP 479
N + + + NL L+LS N + +IS L + S N + P
Sbjct: 119 FNNQITD--IDPLKNLTNLNRLELSSNTI-SDISA----LSGLTSLQQLSFGNQVTDLKP 171
Query: 480 EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL------------ 527
+ + + L+ LD+SSN V I V KL +L LI NQ+S PL
Sbjct: 172 -LANLTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITPLGILTNLDELSLN 228
Query: 528 --------EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEK 579
SLT L LDL+ N++S+ P + L+KL L L NQ ++ P
Sbjct: 229 GNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAG 284
Query: 580 LIHLSELDLSHNFLQGEIPP 599
L L+ L+L+ N L+ +I P
Sbjct: 285 LTALTNLELNENQLE-DISP 303
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 32/234 (13%)
Query: 801 ADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG 860
A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K+
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 468
Query: 861 WNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920
+ ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L +
Sbjct: 469 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
Query: 921 NWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSS 974
+ A T G + APE + + + K DV SFGVL E G P Y S
Sbjct: 525 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 580
Query: 975 FSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 581 VTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 622
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 32/234 (13%)
Query: 801 ADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG 860
A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K+
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 469
Query: 861 WNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920
+ ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L +
Sbjct: 470 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
Query: 921 NWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSS 974
+ A T G + APE + + + K DV SFGVL E G P Y S
Sbjct: 526 YYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMKGSE 581
Query: 975 FSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 582 VTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 623
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 798 DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
++ A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K
Sbjct: 47 NDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVK 105
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L
Sbjct: 106 D---KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 159
Query: 918 HSSNWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTN 971
+ + A T G + APE + + + K DV SFGVL E G P Y
Sbjct: 160 DENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMK 215
Query: 972 FSSFSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S + M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 216 GSEVTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 260
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 798 DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
++ A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K
Sbjct: 57 NDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVK 115
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L
Sbjct: 116 D---KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169
Query: 918 HSSNWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTN 971
+ + A T G + APE + + + K DV SFGVL E G P Y
Sbjct: 170 DENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMK 225
Query: 972 FSSFSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S + M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 226 GSEVTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 270
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 798 DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
++ A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K
Sbjct: 67 NDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVK 125
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L
Sbjct: 126 D---KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 179
Query: 918 HSSNWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTN 971
+ + A T G + APE + + + K DV SFGVL E G P Y
Sbjct: 180 DENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMK 235
Query: 972 FSSFSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S + M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 236 GSEVTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 280
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 798 DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
++ A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K
Sbjct: 67 NDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVK 125
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L
Sbjct: 126 D---KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 179
Query: 918 HSSNWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTN 971
+ + A T G + APE + + + K DV SFGVL E G P Y
Sbjct: 180 DENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMK 235
Query: 972 FSSFSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S + M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 236 GSEVTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 280
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 798 DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
++ A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K
Sbjct: 51 NDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVK 109
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L
Sbjct: 110 D---KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 163
Query: 918 HSSNWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTN 971
+ + A T G + APE + + + K DV SFGVL E G P Y
Sbjct: 164 DENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMK 219
Query: 972 FSSFSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S + M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 220 GSEVTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 264
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 798 DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
++ A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K
Sbjct: 45 NDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVK 103
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L
Sbjct: 104 D---KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 157
Query: 918 HSSNWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTN 971
+ + A T G + APE + + + K DV SFGVL E G P Y
Sbjct: 158 DENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMK 213
Query: 972 FSSFSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S + M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 214 GSEVTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 258
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 20/262 (7%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG ++ ++ + +FA K LL + +++ E+ + H++++ FH
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
GF + F+V E R SL + K A E + ++ + YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHRN---R 137
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H D+ N+ L+ + E + DFG+A + GT Y APE+ + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
DV S G + ++ G P + S I +N ++ +P V L+ M
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFET-----SCLKETYLRIKKN-EYSIPKHINPVAASLIQKM 251
Query: 1006 EVAILCLVESPEARPTMKKVCN 1027
L P ARPT+ ++ N
Sbjct: 252 ------LQTDPTARPTINELLN 267
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 798 DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK 857
++ A +DE L E + ++ + I++ G C A+ +V E + G L L+ + K
Sbjct: 65 NDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVK 123
Query: 858 EFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917
+ + ++ V+ + YL VH D++++NVLL ++H A +SDFG++K L
Sbjct: 124 D---KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 177
Query: 918 HSSNWTAFAGTFG-----YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTN 971
+ + A T G + APE + + + K DV SFGVL E G P Y
Sbjct: 178 DENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP--YRGMK 233
Query: 972 FSSFSNMITEINQNLDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S + M+ + R+ P+ R++ D LM+ LC E RP V
Sbjct: 234 GSEVTAMLEK-----GERMGCPAGCPREMYD-LMN------LCWTYDVENRPGFAAV 278
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 128/293 (43%), Gaps = 52/293 (17%)
Query: 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNI 821
E G G++ +V K AVK S DE ++ ++E+ ++ + +H NI
Sbjct: 49 EATAFGLGKEDAVLKV--------AVKMLKSTAHADE---KEALMSELKIMSHLGQHENI 97
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAA----------------KEFG----W 861
+ G C++ +++EY G L L+ A A KE G
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 862 NQRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920
++ VA +++L +C +H D++++NVLL + H A + DFG+A+ + + S
Sbjct: 158 RDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDS 212
Query: 921 NWTAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976
N+ + APE T + DV S+G+L E+ G +P + N S F
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFY 271
Query: 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ + +++ P+ + SIM+ C P RPT +++C+ L
Sbjct: 272 KLVKD-----GYQMAQPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 315
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 20/262 (7%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG ++ ++ + +FA K LL + +++ E+ + H++++ FH
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
GF + F+V E R SL + K A E + ++ + YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHRN---R 137
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H D+ N+ L+ + E + DFG+A + GT Y APE+ + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
DV S G + ++ G P + S I +N ++ +P V L+ M
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFET-----SCLKETYLRIKKN-EYSIPKHINPVAASLIQKM 251
Query: 1006 EVAILCLVESPEARPTMKKVCN 1027
L P ARPT+ ++ N
Sbjct: 252 ------LQTDPTARPTINELLN 267
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 20/262 (7%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG ++ ++ + +FA K LL + +++ E+ + H++++ FH
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
GF + F+V E R SL + K A E + ++ + YLH +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHRN---R 161
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H D+ N+ L+ + E + DFG+A + GT Y APE+ + +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
DV S G + ++ G P + S I +N ++ +P V L+ M
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFET-----SCLKETYLRIKKN-EYSIPKHINPVAASLIQKM 275
Query: 1006 EVAILCLVESPEARPTMKKVCN 1027
L P ARPT+ ++ N
Sbjct: 276 ------LQTDPTARPTINELLN 291
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 20/262 (7%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG ++ ++ + +FA K LL +++ E+ + H++++ FH
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREKMSMEISIHRSLAHQHVVGFH 87
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
GF + F+V E R SL + K A E + ++ + YLH +
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHRN---R 141
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H D+ N+ L+ + E + DFG+A + GT Y APE+ + +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
DV S G + ++ G P + S I +N ++ +P V L+ M
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFET-----SCLKETYLRIKKN-EYSIPKHINPVAASLIQKM 255
Query: 1006 EVAILCLVESPEARPTMKKVCN 1027
L P ARPT+ ++ N
Sbjct: 256 ------LQTDPTARPTINELLN 271
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 20/262 (7%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG ++ ++ + +FA K LL + +++ E+ + H++++ FH
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
GF + F+V E R SL + K A E + ++ + YLH +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHRN---R 135
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H D+ N+ L+ + E + DFG+A + GT Y APE+ + +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
DV S G + ++ G P + S I +N ++ +P V L+ M
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFET-----SCLKETYLRIKKN-EYSIPKHINPVAASLIQKM 249
Query: 1006 EVAILCLVESPEARPTMKKVCN 1027
L P ARPT+ ++ N
Sbjct: 250 ------LQTDPTARPTINELLN 265
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 20/262 (7%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG ++ ++ + +FA K LL + +++ E+ + H++++ FH
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
GF + F+V E R SL + K A E + ++ + YLH +
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTE---PEARYYLRQIVLGCQYLHRN---R 159
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H D+ N+ L+ + E + DFG+A + GT Y APE+ + +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 946 YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIM 1005
DV S G + ++ G P + S I +N ++ +P V L+ M
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFET-----SCLKETYLRIKKN-EYSIPKHINPVAASLIQKM 273
Query: 1006 EVAILCLVESPEARPTMKKVCN 1027
L P ARPT+ ++ N
Sbjct: 274 ------LQTDPTARPTINELLN 289
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 45/286 (15%)
Query: 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNI 821
E G G++ +V K AVK S DE ++ ++E+ ++ + +H NI
Sbjct: 64 EATAFGLGKEDAVLKV--------AVKMLKSTAHADE---KEALMSELKIMSHLGQHENI 112
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK-EFGWNQRMN------------VI 868
+ G C++ +++EY G L L+ E+ +N N
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 869 KGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
VA +++L +C +H D++++NVLL + H A + DFG+A+ + + SN+
Sbjct: 173 SQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGN 227
Query: 928 T---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEIN 983
+ APE T + DV S+G+L E+ G +P + N S F ++ +
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLVKD-- 284
Query: 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+++ P+ + SIM+ C P RPT +++C+ L
Sbjct: 285 ---GYQMAQPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 323
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 761 FGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
F E+Y I GKG G V K + + +AVK N ++ D L EV L +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKK 77
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ H NI+K ++ +IV E G L I+K K F + +IK V +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSG 133
Query: 875 LSYLH-HDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
++Y+H H+ IVH D+ +N+LL+S+ + + DFG++ ++ GT
Sbjct: 134 ITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAY 188
Query: 931 YAAPEIAHMMRAT--EKYDVHSFGVLALEVIKGNHP 964
Y APE+ +R T EK DV S GV+ ++ G P
Sbjct: 189 YIAPEV---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 761 FGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
F E+Y I GKG G V K + + +AVK N ++ D L EV L +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKK 77
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ H NI+K ++ +IV E G L I+K K F + +IK V +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSG 133
Query: 875 LSYLH-HDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
++Y+H H+ IVH D+ +N+LL+S+ + + DFG++ ++ GT
Sbjct: 134 ITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAY 188
Query: 931 YAAPEIAHMMRAT--EKYDVHSFGVLALEVIKGNHP 964
Y APE+ +R T EK DV S GV+ ++ G P
Sbjct: 189 YIAPEV---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL-TEI 816
D+ G++ +GKG G VY +L + + A+K+ + D Q L+E +AL +
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQP--LHEEIALHKHL 62
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
+H+NI+++ G S I E + GSL+ +L+ + K + L
Sbjct: 63 KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLK 122
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEA-HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
YLH + IVH DI NVL+++ +SDFG +K L + F GT Y APE
Sbjct: 123 YLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPE 179
Query: 936 IAHMMRATEKY----DVHSFGVLALEVIKGNHP 964
I + + Y D+ S G +E+ G P
Sbjct: 180 I--IDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL-TEI 816
D+ G++ +GKG G VY +L + + A+K+ + D Q L+E +AL +
Sbjct: 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQP--LHEEIALHKHL 76
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
+H+NI+++ G S I E + GSL+ +L+ + K + L
Sbjct: 77 KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLK 136
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEA-HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
YLH + IVH DI NVL+++ +SDFG +K L + F GT Y APE
Sbjct: 137 YLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPE 193
Query: 936 IAHMMRATEKY----DVHSFGVLALEVIKGNHP 964
I + + Y D+ S G +E+ G P
Sbjct: 194 I--IDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 151/343 (44%), Gaps = 51/343 (14%)
Query: 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161
+L +N S N L P + NL+KL + + NNQ++ + P + +LT L L N +
Sbjct: 69 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 124
Query: 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGS-IPNV--MG 218
PL+ L+ +N L L N S FG+ + ++ +
Sbjct: 125 TDIDPLK--NLTNLNRLELSSNTISD--------ISALSGLTSLQQLSFGNQVTDLKPLA 174
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP---------------- 262
NL +L LD+S N++ S LA L+NL L N + P
Sbjct: 175 NLTTLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 232
Query: 263 ----SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA 318
+ +L +L +LDL+ NQ+ PL S L+ LT + L N +S +I P G L A
Sbjct: 233 LKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NISPLAG-LTA 288
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L+ L L NQL+ + P I NL +L L LY N + P + L L +L N +S
Sbjct: 289 LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVS 344
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
V S+ NLT + ++ N + L P NLT + +L N
Sbjct: 345 DV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 383
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 31/348 (8%)
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L+NL + N L P + NL L ++ ++ NQ+ PL+ NL++LT ++LFNN
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNN 122
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
++ I P + NL L+ L L N + + ++ L+SL+ L + N L P +
Sbjct: 123 QIT-DIDPLK-NLTNLNRLELSSNTISDI--SALSGLTSLQQLS-FGNQVTDLKP--LAN 175
Query: 364 LKSLSKLELCRNHLSGV-IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQ 422
L +L +L++ N +S + + + NL L+ N N + + P LT+L+ L N
Sbjct: 176 LTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITPLGI--LTNLDELSLNG 230
Query: 423 NNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG 482
N L K NLT LDL+ N + KL N I +I P G
Sbjct: 231 NQL--KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQI-SNISPLAG 285
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSA 542
++ L L+L+ N + P+ L +L L L N +S P+ SLT+LQ L
Sbjct: 286 LTA-LTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFYN 340
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
NK+S S+ NL+ +++L+ +NQ + P L +++L L+
Sbjct: 341 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 384
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 118/260 (45%), Gaps = 40/260 (15%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
+ YL +L+++ N L+ + P + NLTKLV + M N + + P NLT+L L
Sbjct: 64 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNA-SMNNIYGSIPP 479
N + + + NL L+LS N + +IS L + S N + P
Sbjct: 120 FNNQITD--IDPLKNLTNLNRLELSSNTI-SDISA----LSGLTSLQQLSFGNQVTDLKP 172
Query: 480 EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL------------ 527
+ + + L+ LD+SSN V I V KL +L LI NQ+S PL
Sbjct: 173 -LANLTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITPLGILTNLDELSLN 229
Query: 528 --------EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEK 579
SLT L LDL+ N++S+ P + L+KL L L NQ ++ P
Sbjct: 230 GNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAG 285
Query: 580 LIHLSELDLSHNFLQGEIPP 599
L L+ L+L+ N L+ +I P
Sbjct: 286 LTALTNLELNENQLE-DISP 304
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 151/343 (44%), Gaps = 51/343 (14%)
Query: 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161
+L +N S N L P + NL+KL + + NNQ++ + P + +LT L L N +
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGS-IPNV--MG 218
PL+ L+ +N L L N S FG+ + ++ +
Sbjct: 120 TDIDPLK--NLTNLNRLELSSNTISD--------ISALSGLTSLQQLNFGNQVTDLKPLA 169
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP---------------- 262
NL +L LD+S N++ S LA L+NL L N + P
Sbjct: 170 NLTTLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ 227
Query: 263 ----SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA 318
+ +L +L +LDL+ NQ+ PL S L+ LT + L N +S +I P G L A
Sbjct: 228 LKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NISPLAG-LTA 283
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
L+ L L NQL+ + P I NL +L L LY N + P + L L +L N +S
Sbjct: 284 LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVS 339
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
V S+ NLT + ++ N + L P NLT + +L N
Sbjct: 340 DV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 378
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 31/348 (8%)
Query: 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L+NL + N L P + NL L ++ ++ NQ+ PL+ NL++LT ++LFNN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTLFNN 117
Query: 304 SLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY 363
++ I P + NL L+ L L N + + ++ L+SL+ L + N L P +
Sbjct: 118 QIT-DIDPLK-NLTNLNRLELSSNTISDI--SALSGLTSLQQLN-FGNQVTDLKP--LAN 170
Query: 364 LKSLSKLELCRNHLSGV-IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQ 422
L +L +L++ N +S + + + NL L+ N N + + P LT+L+ L N
Sbjct: 171 LTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITPLGI--LTNLDELSLNG 225
Query: 423 NNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG 482
N L K NLT LDL+ N + KL N I +I P G
Sbjct: 226 NQL--KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQI-SNISPLAG 280
Query: 483 DSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSA 542
++ L L+L+ N + P+ L +L L L N +S P+ SLT+LQ L
Sbjct: 281 LTA-LTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFYN 335
Query: 543 NKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
NK+S S+ NL+ +++L+ +NQ + P L +++L L+
Sbjct: 336 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 379
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 116/265 (43%), Gaps = 50/265 (18%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
+ YL +L+++ N L+ + P + NLTKLV + M N + + P NLT+L L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNN------LYGEISFNWRNFPKLGTFNASMNNIY 474
N + + + NL L+LS N L G S NF N
Sbjct: 115 FNNQITD--IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNF----------GNQV 162
Query: 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL------- 527
+ P + + + L+ LD+SSN V I V KL +L LI NQ+S PL
Sbjct: 163 TDLKP-LANLTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITPLGILTNLD 219
Query: 528 -------------EFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP 574
SLT L LDL+ N++S+ P + L+KL L L NQ ++ P
Sbjct: 220 ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 277
Query: 575 TEFEKLIHLSELDLSHNFLQGEIPP 599
L L+ L+L+ N L+ +I P
Sbjct: 278 --LAGLTALTNLELNENQLE-DISP 299
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 167
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 246 NLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI-PLSFSNLSSLTLMSLFNNS 304
NL IL+L+ N L + L L +LDLS+N S+ P +F L L + L
Sbjct: 56 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 115
Query: 305 LSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364
L P L AL L L N L + + +L +L L+L+ N + L
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 175
Query: 365 KSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
SL +L L +N ++ V PH+ +L +L+ + + N+L L ++ L +L+ LR N N
Sbjct: 176 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Query: 288 SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYIN-QLDGVIPPSIGNLSSLRTL 346
SF +LT++ L +N L+ L L +L L N QL V P + L L TL
Sbjct: 50 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 109
Query: 347 YLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS---IGNLTKLVLVNMCENHLFG 403
+L G L P L +L L L N L + + +GNLT L L N +
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHG---NRISS 166
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
+ ++FR L SL+RL +QN + AF D L L L NNL
Sbjct: 167 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL 212
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 51/197 (25%), Positives = 76/197 (38%), Gaps = 1/197 (0%)
Query: 324 LYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN-HLSGVIP 382
L+ N++ V S +L L+L+ N + L L +L+L N L V P
Sbjct: 38 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 97
Query: 383 HSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFL 442
+ L +L +++ L L P FR L +L+ L N L + F D NLT L
Sbjct: 98 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 157
Query: 443 DLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502
L N + +R L N + P D +L L L +N++
Sbjct: 158 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT 217
Query: 503 VQFEKLFSLNKLILNLN 519
L +L L LN N
Sbjct: 218 EALAPLRALQYLRLNDN 234
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 57/138 (41%)
Query: 214 PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFE 273
P L L L L + L+ P L+ L LYL N+L +L +L
Sbjct: 97 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 156
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L L N++ +F L SL + L N ++ P +L L L L+ N L +
Sbjct: 157 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 216
Query: 334 PPSIGNLSSLRTLYLYDN 351
++ L +L+ L L DN
Sbjct: 217 TEALAPLRALQYLRLNDN 234
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 166
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 167 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 140
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 141 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 246 NLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI-PLSFSNLSSLTLMSLFNNS 304
NL IL+L+ N L + L L +LDLS+N S+ P +F L L + L
Sbjct: 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 116
Query: 305 LSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364
L P L AL L L N L + + +L +L L+L+ N + L
Sbjct: 117 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 176
Query: 365 KSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
SL +L L +N ++ V PH+ +L +L+ + + N+L L ++ L +L+ LR N N
Sbjct: 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Query: 288 SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYIN-QLDGVIPPSIGNLSSLRTL 346
SF +LT++ L +N L+ L L +L L N QL V P + L L TL
Sbjct: 51 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110
Query: 347 YLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS---IGNLTKLVLVNMCENHLFG 403
+L G L P L +L L L N L + + +GNLT L L N +
Sbjct: 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHG---NRISS 167
Query: 404 LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
+ ++FR L SL+RL +QN + AF D L L L NNL
Sbjct: 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL 213
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 57/138 (41%)
Query: 214 PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFE 273
P L L L L + L+ P L+ L LYL N+L +L +L
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L L N++ +F L SL + L N ++ P +L L L L+ N L +
Sbjct: 158 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 217
Query: 334 PPSIGNLSSLRTLYLYDN 351
++ L +L+ L L DN
Sbjct: 218 TEALAPLRALQYLRLNDN 235
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 51/197 (25%), Positives = 76/197 (38%), Gaps = 1/197 (0%)
Query: 324 LYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN-HLSGVIP 382
L+ N++ V S +L L+L+ N + L L +L+L N L V P
Sbjct: 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98
Query: 383 HSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFL 442
+ L +L +++ L L P FR L +L+ L N L + F D NLT L
Sbjct: 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158
Query: 443 DLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502
L N + +R L N + P D +L L L +N++
Sbjct: 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT 218
Query: 503 VQFEKLFSLNKLILNLN 519
L +L L LN N
Sbjct: 219 EALAPLRALQYLRLNDN 235
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 40/220 (18%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALTEIRHRNIIKF 824
IG+GR G+VYK L + AVK F+ A++ F+NE + + + H NI +F
Sbjct: 21 IGRGRYGAVYKGSLDERPV-AVKVFS-------FANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 825 ----HGFCSNAQHSFI-VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
++ + ++ V EY GSL L + W + V L+YLH
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLH 128
Query: 880 HDC------LPPIVHGDISSKNVLLDSEHEAHVSDFGIA------KFLNPHSSNWTAFA- 926
+ P I H D++S+NVL+ ++ +SDFG++ + + P + A +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 927 -GTFGYAAPEI---AHMMR----ATEKYDVHSFGVLALEV 958
GT Y APE+ A +R A ++ D+++ G++ E+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 761 FGEKYCI----GKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
F E+Y I GKG G V K + + +AVK N ++ D L EV L +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKK 77
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ H NI+K ++ +IV E G L I+K K F + +IK V +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSG 133
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
++Y+H IVH D+ +N+LL+S+ + + DFG++ ++ GT Y
Sbjct: 134 ITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYY 189
Query: 932 AAPEIAHMMRAT--EKYDVHSFGVLALEVIKGNHP 964
APE+ +R T EK DV S GV+ ++ G P
Sbjct: 190 IAPEV---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 147
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS----NWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 40/282 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDE---FLNEVLALTEIRHRNIIK 823
IGKGR G VY + +L+ E ++D+ F EV+A + RH N++
Sbjct: 41 IGKGRFGQVYHGRWHGEVAI-------RLIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93
Query: 824 FHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
F G C + H I++ +L ++++D + N+ + + + + YLH
Sbjct: 94 FMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDV--NKTRQIAQEIVKGMGYLHAKG- 150
Query: 884 PPIVHGDISSKNVLLDSEHEAHVSDFG---IAKFLNP--HSSNWTAFAGTFGYAAPEIAH 938
I+H D+ SKNV D+ + ++DFG I+ L G + APEI
Sbjct: 151 --ILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207
Query: 939 MMRA---------TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
+ ++ DV + G + E+ H R++ + +I ++ +
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYEL----HAREWPFKTQPA-EAIIWQMGTGMK-- 260
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
P S+ M K I ++ + C E RPT K+ ++L K
Sbjct: 261 -PNLSQIGMGK--EISDILLFCWAFEQEERPTFTKLMDMLEK 299
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 148
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 43/284 (15%)
Query: 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNI 821
E G G++ +V K AVK S DE ++ ++E+ ++ + +H NI
Sbjct: 64 EATAFGLGKEDAVLKV--------AVKMLKSTAHADE---KEALMSELKIMSHLGQHENI 112
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-----------FGWNQRMNVIKG 870
+ G C++ +++EY G L L+ + E ++
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 871 VANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT- 928
VA +++L +C +H D++++NVLL + H A + DFG+A+ + + SN+
Sbjct: 173 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNAR 227
Query: 929 --FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985
+ APE T + DV S+G+L E+ G +P + N S F ++ +
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLVKD---- 282
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+++ P+ + SIM+ C P RPT +++C+ L
Sbjct: 283 -GYQMAQPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 321
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 145
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 146 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 148
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 146
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 147
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 33/279 (11%)
Query: 758 IDD-FGEKYCIGKGRQGSVYKAELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLA 812
IDD F K +G G G V+ E S +I + K SQ+ +++ E+
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE------AEIEV 73
Query: 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS-LTTILKDDAAAKEFGWNQRMNVIKGV 871
L + H NIIK + + +IV E + G L I+ A K ++K +
Sbjct: 74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLD--SEHEA-HVSDFGIAKFL--NPHSSNWTAFA 926
NAL+Y H +VH D+ +N+L S H + DFG+A+ + HS+N A
Sbjct: 134 MNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---A 187
Query: 927 GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986
GT Y APE+ T K D+ S GV+ ++ G P F+ S + E+ Q
Sbjct: 188 GTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLP-------FTGTS--LEEVQQKA 237
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
++ P + + +++ L + PE RP+ +V
Sbjct: 238 TYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQV 276
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 97
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I ++ + G L +++ G +N +A
Sbjct: 98 SVDNPHVCRLLGICLTSTVQLI-TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 154
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF---GY 931
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 155 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 212 ALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 263
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 264 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 294
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D++ K +GKG V + +G+ FA K N++ L D + E +++
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQ 63
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF-GWNQRMNVIKGVANALS 876
H NI++ H ++V + + G L +D A+EF + I+ + +++
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIA 119
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
Y H + IVH ++ +N+LL S+ + ++DFG+A +N S W FAGT GY +
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 175
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ ++ D+ + GV+ ++ G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D++ K +GKG V + +G+ FA K N++ L D + E +++
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQ 62
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF-GWNQRMNVIKGVANALS 876
H NI++ H ++V + + G L +D A+EF + I+ + +++
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIA 118
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
Y H + IVH ++ +N+LL S+ + ++DFG+A +N S W FAGT GY +
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 174
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ ++ D+ + GV+ ++ G P
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 759 DDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D++ K +GKG V + +G+ FA K N++ L D + E +++
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQ 63
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF-GWNQRMNVIKGVANALS 876
H NI++ H ++V + + G L +D A+EF + I+ + +++
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIA 119
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
Y H + IVH ++ +N+LL S+ + ++DFG+A +N S W FAGT GY +
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 175
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ ++ D+ + GV+ ++ G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + Y
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKY 143
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 40/276 (14%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE--IRHRNIIK 823
+G G G VYK + +G + A+K + D D++E + + + + + HRNI
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIK------VMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 824 FHG-FCSNA-----QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
++G F ++V E+ GS+T ++K+ + + + LS+
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLSH 144
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH ++H DI +NVLL E + DFG++ L+ F GT + APE+
Sbjct: 145 LHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201
Query: 938 HMMRATE-----KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992
+ K D+ S G+ A+E+ +G P +M L R P
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPP----------LCDMHPMRALFLIPRNPA 251
Query: 993 P---SRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P S+ K S +E CLV++ RP +++
Sbjct: 252 PRLKSKKWSKKFQSFIES---CLVKNHSQRPATEQL 284
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 15/186 (8%)
Query: 782 SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYL 841
S FAVK + ++ E Q E L L E H NI+K H + H+F+V E L
Sbjct: 35 SNQAFAVKIISKRM---EANTQKEIT--ALKLCE-GHPNIVKLHEVFHDQLHTFLVMELL 88
Query: 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901
+ G L +K K F + +++ + +A+S++H +VH D+ +N+L E
Sbjct: 89 NGGELFERIK---KKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDE 142
Query: 902 H---EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ E + DFG A+ P + T YAAPE+ + E D+ S GV+ +
Sbjct: 143 NDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTM 202
Query: 959 IKGNHP 964
+ G P
Sbjct: 203 LSGQVP 208
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 23/240 (9%)
Query: 783 GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF----HGFCSNAQHSFIVS 838
G I F++ +L E+A E+ ++L I N + + S H F V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 839 EY------------LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
Y L +LK F + +AL YLH I
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---I 153
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGTFGYAAPEIAHMMRATE 944
+H D+ +N+LL+ + ++DFG AK L+P S A F GT Y +PE+ A++
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 945 KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSI 1004
D+ + G + +++ G P + + N I ++ + + +RD+++KL+ +
Sbjct: 214 SSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG V + ++P+G +A K N++ L D + E ++H NI++ H
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVRLH 69
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
S ++V + + G L +D A+E+ + + L ++H L
Sbjct: 70 DSISEEGFHYLVFDLVTGGELF----EDIVAREY--YSEADASHCIQQILESVNHCHLNG 123
Query: 886 IVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
IVH D+ +N+LL S+ + ++DFG+A + W FAGT GY +PE+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
+ D+ + GV+ ++ G P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 763 EKYC----IGKGRQG-SVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
EKY IG+G G ++ G + +K+ N + + +++E EV L ++
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK--EREESRREVAVLANMK 81
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H NI+++ +IV +Y + G L + F +Q ++ + AL +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL-FQEDQILDWFVQICLALKH 140
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+H I+H DI S+N+ L + + DFGIA+ LN A GT Y +PEI
Sbjct: 141 VHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNH 963
K D+ + G + E+ H
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 43/284 (15%)
Query: 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNI 821
E G G++ +V K AVK S DE ++ ++E+ ++ + +H NI
Sbjct: 64 EATAFGLGKEDAVLKV--------AVKMLKSTAHADE---KEALMSELKIMSHLGQHENI 112
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE-----------FGWNQRMNVIKG 870
+ G C++ +++EY G L L+ + E ++
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 871 VANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT- 928
VA +++L +C +H D++++NVLL + H A + DFG+A+ + + SN+
Sbjct: 173 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNAR 227
Query: 929 --FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985
+ APE T + DV S+G+L E+ G +P + N S F ++ +
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLVKD---- 282
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+++ P+ + SIM+ C P RPT +++C+ L
Sbjct: 283 -GYQMAQPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 321
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 761 FGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
F + IG G G+VY A ++ + + A+KK + QD + EV L ++RH
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQKLRHP 114
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
N I++ G +++V EY GS + +L + K + V G L+YLH
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM 939
+ +H D+ + N+LL + DFG A + P + F GT + APE+
Sbjct: 172 SHNM---IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILA 224
Query: 940 MRATE---KYDVHSFGVLALEVIKGNHP 964
M + K DV S G+ +E+ + P
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS--SNWTAFAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S + AF GT
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 254 KFFPKARDLVEKLL 267
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D + + +GKG G V + +G AVK S+ + D++ L EV L ++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLD 84
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H NI+K + F + + ++V E G L + + K F +I+ V + ++Y
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
+H + IVH D+ +N+LL+S+ + + DFG++ S GT Y AP
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 197
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E+ H EK DV S GV+ ++ G P
Sbjct: 198 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 748 KFLYEEIIKAIDDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEF 806
+F+ K D++ K +GKG V + +G+ FA K N++ L D +
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKL 75
Query: 807 LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF-GWNQRM 865
E +++H NI++ H ++V + + G L +D A+EF
Sbjct: 76 EREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADAS 131
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNW 922
+ I+ + +++Y H + IVH ++ +N+LL S+ + ++DFG+A +N S W
Sbjct: 132 HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAW 187
Query: 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
FAGT GY +PE+ ++ D+ + GV+ ++ G P
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 12/230 (5%)
Query: 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
G+ +G + V K EL +G AVK N Q + + + E+ L RH +
Sbjct: 20 LGDTLGVGTFGKVKVGKHEL-TGHKVAVKILNRQKI-RSLDVVGKIRREIQNLKLFRHPH 77
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
IIK + S F+V EY+ G L + + E + + + + + + Y H
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE---KESRRLFQQILSGVDYCHR 134
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHM 939
+VH D+ +NVLLD+ A ++DFG++ ++ G+ YAAPE I+
Sbjct: 135 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGR 190
Query: 940 MRATEKYDVHSFGVLALEVIKGNHP--RDYVSTNFSSFSNMITEINQNLD 987
+ A + D+ S GV+ ++ G P D+V T F + I Q L+
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLN 240
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 41/284 (14%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V+ AE I+ AVK + A +D F E LT ++H +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKD-FHREAELLTNLQHEH 76
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK---DDAA-------AKEFGWNQRMNVIKG 870
I+KF+G C +V EY+ G L L+ DA E +Q +++ +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG--- 927
+A + YL VH D++++N L+ + DFG+++ + +S+++ G
Sbjct: 137 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGGHTM 191
Query: 928 -TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985
+ PE + T + DV S GV+ E+ G P +S N +I I Q
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVIECITQG 246
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ P + E+ + C P R +K + LL
Sbjct: 247 RVLQRPRTCPQ------EVYELMLGCWQREPHMRKNIKGIHTLL 284
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 252
Query: 989 RLPTPSRDVMDKLMSI 1004
+ +RD+++KL+ +
Sbjct: 253 KFFPKARDLVEKLLVL 268
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 17/209 (8%)
Query: 761 FGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
F + IG G G+VY A ++ + + A+KK + QD + EV L ++RH
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQKLRHP 75
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
N I++ G +++V EY GS + +L + K + V G L+YLH
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 880 -HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH 938
H+ ++H D+ + N+LL + DFG A + P + F GT + APE+
Sbjct: 133 SHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVIL 184
Query: 939 MMRATE---KYDVHSFGVLALEVIKGNHP 964
M + K DV S G+ +E+ + P
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 252
Query: 989 RLPTPSRDVMDKLMSI 1004
+ +RD+++KL+ +
Sbjct: 253 KFFPKARDLVEKLLVL 268
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKF 207
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK------FLNPHSSNWTAFAGTFGY 931
L VH D++++N +LD + V+DFG+A+ F + H N T +
Sbjct: 208 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH--NKTGAKLPVKW 262
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
A E + T K DV SFGVL E++ P
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKF 149
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK------FLNPHSSNWTAFAGTFGY 931
L VH D++++N +LD + V+DFG+A+ F + H N T +
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH--NKTGAKLPVKW 204
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
A E + T K DV SFGVL E++ P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D + + +GKG G V + +G AVK S+ + D++ L EV L ++
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLD 107
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H NI+K + F + + ++V E G L + + K F +I+ V + ++Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
+H + IVH D+ +N+LL+S+ + + DFG++ S GT Y AP
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 220
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E+ H EK DV S GV+ ++ G P
Sbjct: 221 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG V + ++P+G +A K N++ L D + E ++H NI++ H
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVRLH 69
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
S ++V + + G L +D A+E+ + + L ++H L
Sbjct: 70 DSISEEGFHYLVFDLVTGGELF----EDIVAREY--YSEADASHCIQQILESVNHCHLNG 123
Query: 886 IVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
IVH D+ +N+LL S+ + ++DFG+A + W FAGT GY +PE+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
+ D+ + GV+ ++ G P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ EY +G+L L+ + ++ +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHS 919
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
N T + APE T + DV SFGVL E+ G P Y +
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 271
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 272 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 30/263 (11%)
Query: 766 CIGKGRQGSVYKAEL--PSGIIFAVK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
CIG+G+ G V++ P AV K D + +++FL E L + + H +I+
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 102
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHH 880
K G + +I+ E G L + L+ +++ + ++ ++ AL+YL
Sbjct: 103 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 157
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAH 938
VH DI+++NVL+ S + DFG+++++ S+ + A G + APE +
Sbjct: 158 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 213
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T DV FGV E++ G P V N ++I I RLP P +
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENG--ERLPMPP-NC 265
Query: 998 MDKLMSIMEVAILCLVESPEARP 1020
L S+M C P RP
Sbjct: 266 PPTLYSLM---TKCWAYDPSRRP 285
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKF 148
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP--FRAGNEGLIFAKIIKLEYDFPE 255
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + +
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKF 153
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In
Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEGLIFAKIIKLEYDFPE 255
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKF 149
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D + + +GKG G V + +G AVK S+ + D++ L EV L ++
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLD 108
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H NI+K + F + + ++V E G L + + K F +I+ V + ++Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
+H + IVH D+ +N+LL+S+ + + DFG++ S GT Y AP
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 221
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E+ H EK DV S GV+ ++ G P
Sbjct: 222 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ------DEFLNEVLA 812
+F + +G G G+VYK +P G +K + E+ + E L+E
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEG-----EKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + + ++ + G C + I ++ + G L +++ G +N +A
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQLI-TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 161
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--- 929
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 162 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 219 WMALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 270
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 271 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 303
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ucn-01
Length = 310
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 254 KFFPKARDLVEKLL 267
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKF 146
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 30/263 (11%)
Query: 766 CIGKGRQGSVYKAEL--PSGIIFAVK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
CIG+G+ G V++ P AV K D + +++FL E L + + H +I+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHH 880
K G + +I+ E G L + L+ ++F + ++ ++ AL+YL
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAH 938
VH DI+++NVL+ + + DFG+++++ S+ + A G + APE +
Sbjct: 130 K---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T DV FGV E++ G P V N ++I I RLP P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENG--ERLPMPP-NC 237
Query: 998 MDKLMSIMEVAILCLVESPEARP 1020
L S+M C P RP
Sbjct: 238 PPTLYSLM---TKCWAYDPSRRP 257
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 30/263 (11%)
Query: 766 CIGKGRQGSVYKAEL--PSGIIFAVK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
CIG+G+ G V++ P AV K D + +++FL E L + + H +I+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHH 880
K G + +I+ E G L + L+ +++ + ++ ++ AL+YL
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 129
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAH 938
VH DI+++NVL+ S + DFG+++++ S+ + A G + APE +
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T DV FGV E++ G P V N ++I I RLP P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENG--ERLPMPP-NC 237
Query: 998 MDKLMSIMEVAILCLVESPEARP 1020
L S+M C P RP
Sbjct: 238 PPTLYSLM---TKCWAYDPSRRP 257
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 30/263 (11%)
Query: 766 CIGKGRQGSVYKAEL--PSGIIFAVK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
CIG+G+ G V++ P AV K D + +++FL E L + + H +I+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHH 880
K G + +I+ E G L + L+ +++ + ++ ++ AL+YL
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 129
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAH 938
VH DI+++NVL+ S + DFG+++++ S+ + A G + APE +
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T DV FGV E++ G P V N ++I I RLP P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENG--ERLPMPP-NC 237
Query: 998 MDKLMSIMEVAILCLVESPEARP 1020
L S+M C P RP
Sbjct: 238 PPTLYSLM---TKCWAYDPSRRP 257
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G VY L I AVK N ++ + +FL E + + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 823 KFHGFCSNAQHS-FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----VANALSY 877
G C ++ S +V Y+ G L ++++ N + + G VA + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQVAKGMKF 148
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS----SNWTAFAGTFGYAA 933
L VH D++++N +LD + V+DFG+A+ + N T + A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E + T K DV SFGVL E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
Js30
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 146 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 260
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 261 KFFPKARDLVEKLL 274
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 254 KFFPKARDLVEKLL 267
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 256
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 257 KFFPKARDLVEKLL 270
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide Complex
Length = 286
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 116 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 230
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 231 KFFPKARDLVEKLL 244
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 117 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 231
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 232 KFFPKARDLVEKLL 245
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3
Length = 286
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 118 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 232
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 233 KFFPKARDLVEKLL 246
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 254 KFFPKARDLVEKLL 267
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase-
1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine
Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 256
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 257 KFFPKARDLVEKLL 270
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 123 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 237
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 238 KFFPKARDLVEKLL 251
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 33/299 (11%)
Query: 730 TDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAEL--PSGIIFA 787
TDD+ + YE I + + G CIG+G+ G V++ P A
Sbjct: 364 TDDYAEIIDEEDTYTMPSTRDYE-IQRERIELGR--CIGEGQFGDVHQGIYMSPENPAMA 420
Query: 788 VK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL 846
V K D + +++FL E L + + H +I+K G + +I+ E G L
Sbjct: 421 VAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGEL 477
Query: 847 TTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904
+ L+ ++F + ++ ++ AL+YL VH DI+++NVL+ S
Sbjct: 478 RSFLQ----VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 530
Query: 905 HVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVI-KG 961
+ DFG+++++ S+ + A G + APE + R T DV FGV E++ G
Sbjct: 531 KLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 962 NHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARP 1020
P V N ++I I RLP P + L S+M C P RP
Sbjct: 590 VKPFQGVKNN-----DVIGRIENG--ERLPMPP-NCPPTLYSLM---TKCWAYDPSRRP 637
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-8
Length = 289
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGT 928
+ +AL YLH I+H D+ +N+LL+ + ++DFG AK L+P S A F GT
Sbjct: 119 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
Y +PE+ A + D+ + G + +++ G P + + N I ++ +
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 233
Query: 989 RLPTPSRDVMDKLM 1002
+ +RD+++KL+
Sbjct: 234 KFFPKARDLVEKLL 247
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 30/263 (11%)
Query: 766 CIGKGRQGSVYKAEL--PSGIIFAVK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
CIG+G+ G V++ P AV K D + +++FL E L + + H +I+
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 79
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHH 880
K G + +I+ E G L + L+ +++ + ++ ++ AL+YL
Sbjct: 80 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 134
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAH 938
VH DI+++NVL+ S + DFG+++++ S+ + A G + APE +
Sbjct: 135 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 190
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T DV FGV E++ G P V N ++I I RLP P +
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENG--ERLPMPP-NC 242
Query: 998 MDKLMSIMEVAILCLVESPEARP 1020
L S+M C P RP
Sbjct: 243 PPTLYSLM---TKCWAYDPSRRP 262
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase
Domain Of Focal Adhesion Kinase With A Phosphorylated
Activation Loop
Length = 276
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 30/263 (11%)
Query: 766 CIGKGRQGSVYKAEL--PSGIIFAVK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
CIG+G+ G V++ P AV K D + +++FL E L + + H +I+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHH 880
K G + +I+ E G L + L+ ++F + ++ ++ AL+YL
Sbjct: 75 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAH 938
VH DI+++NVL+ S + DFG+++++ S+ A G + APE +
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESIN 185
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T DV FGV E++ G P V N ++I I RLP P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENG--ERLPMPP-NC 237
Query: 998 MDKLMSIMEVAILCLVESPEARP 1020
L S+M C P RP
Sbjct: 238 PPTLYSLM---TKCWAYDPSRRP 257
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
ID+F +GKG G V A + +G ++AVK ++ QD+ + +TE
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-----QDDDVE--CTMTE 73
Query: 816 IRHRNIIKFHGFCSN-------AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
R ++ + H F + F V E+++ G L ++ ++ F +
Sbjct: 74 KRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ---KSRRFDEARARFYA 130
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+ +AL +LH I++ D+ NVLLD E ++DFG+ K + F GT
Sbjct: 131 AEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGT 187
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
Y APEI M D + GVL E++ G+ P
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 30/263 (11%)
Query: 766 CIGKGRQGSVYKAEL--PSGIIFAVK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
CIG+G+ G V++ P AV K D + +++FL E L + + H +I+
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 71
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHH 880
K G + +I+ E G L + L+ +++ + ++ ++ AL+YL
Sbjct: 72 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 126
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAH 938
VH DI+++NVL+ S + DFG+++++ S+ + A G + APE +
Sbjct: 127 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 182
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T DV FGV E++ G P V N ++I I RLP P +
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENG--ERLPMPP-NC 234
Query: 998 MDKLMSIMEVAILCLVESPEARP 1020
L S+M C P RP
Sbjct: 235 PPTLYSLM---TKCWAYDPSRRP 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 799 EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858
E AD +E + E + ++ + I++ G C A+ +V E G L L +E
Sbjct: 50 EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKREE 106
Query: 859 FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918
+ ++ V+ + YL VH D++++NVLL + H A +SDFG++K L
Sbjct: 107 IPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163
Query: 919 SSNWTAFAG---TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHP 964
S +TA + + APE + + + + DV S+GV E + G P
Sbjct: 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 30/263 (11%)
Query: 766 CIGKGRQGSVYKAEL--PSGIIFAVK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
CIG+G+ G V++ P AV K D + +++FL E L + + H +I+
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 77
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHH 880
K G + +I+ E G L + L+ +++ + ++ ++ AL+YL
Sbjct: 78 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 132
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAH 938
VH DI+++NVL+ S + DFG+++++ S+ + A G + APE +
Sbjct: 133 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 188
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T DV FGV E++ G P V N ++I I RLP P +
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENG--ERLPMPP-NC 240
Query: 998 MDKLMSIMEVAILCLVESPEARP 1020
L S+M C P RP
Sbjct: 241 PPTLYSLM---TKCWAYDPSRRP 260
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 12/210 (5%)
Query: 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D F IGKG G V + + ++A+K N Q + ++ F E+ + +
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF-KELQIMQGLE 73
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H ++ + + F+V + L G L L+ + KE I + AL Y
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE---ETVKLFICELVMALDY 130
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
L + I+H D+ N+LLD H++DF IA L P + T AGT Y APE+
Sbjct: 131 LQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMAPEMF 186
Query: 938 HMMRATE---KYDVHSFGVLALEVIKGNHP 964
+ D S GV A E+++G P
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 30/263 (11%)
Query: 766 CIGKGRQGSVYKAEL--PSGIIFAVK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
CIG+G+ G V++ P AV K D + +++FL E L + + H +I+
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 76
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHH 880
K G + +I+ E G L + L+ +++ + ++ ++ AL+YL
Sbjct: 77 KLIGVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 131
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAH 938
VH DI+++NVL+ S + DFG+++++ S+ + A G + APE +
Sbjct: 132 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 187
Query: 939 MMRATEKYDVHSFGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
R T DV FGV E++ G P V N ++I I RLP P +
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENG--ERLPMPP-NC 239
Query: 998 MDKLMSIMEVAILCLVESPEARP 1020
L S+M C P RP
Sbjct: 240 PPTLYSLM---TKCWAYDPSRRP 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 38/286 (13%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI-RHRN 820
+G+G G V AE L V K ++L + ++D + ++E+ + I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMN------------V 867
II G C+ +++ EY +G+L L+ E+ +N N
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 868 IKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSNWTA 924
VA + YL C +H D++++NVL+ ++ ++DFG+A+ ++ + T
Sbjct: 197 AYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 925 FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEIN 983
+ APE T + DV SFGVL E+ G P Y ++ E
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKE-- 308
Query: 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
HR+ PS + M + + C P RPT K++ L
Sbjct: 309 ---GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 347
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 76
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+K+ G C +A ++ ++ EYL GSL L+ A A+ + + + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAERIDHIKLLQYTSQICKGMEYL- 133
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGTFGYAAP 934
+H D++++N+L+++E+ + DFG+ K L P + F Y AP
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWY-AP 189
Query: 935 EIAHMMRATEKYDVHSFGVLALEV 958
E + + DV SFGV+ E+
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 72
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 73 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIA 127
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 185 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 236
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 237 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 269
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 74
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 75 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 129
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 130 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 187 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 238
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 239 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 271
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain With
4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 78
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 79 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 133
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 134 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 191 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 242
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 243 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 275
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 75
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 76 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 130
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 131 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 188 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 239
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 240 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 272
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 79
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 80 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 134
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 135 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 192 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 243
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 244 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 276
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 66
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 67 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 121
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 122 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 179 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 230
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 231 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 263
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With Amp-
Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 72
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 73 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 127
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 185 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 236
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 237 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 269
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 75
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 76 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 130
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 131 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 188 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 239
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 240 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 272
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 69
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 70 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 124
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 125 EGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 182 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 233
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 234 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 266
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 127/299 (42%), Gaps = 33/299 (11%)
Query: 730 TDDFGDPFGFSSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAEL--PSGIIFA 787
TDD+ + YE I + + G CIG+G+ G V++ P A
Sbjct: 364 TDDYAEIIDEEDTYTMPSTRDYE-IQRERIELGR--CIGEGQFGDVHQGIYMSPENPAMA 420
Query: 788 VK-KFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL 846
V K D + +++FL E L + + H +I+K G + +I+ E G L
Sbjct: 421 VAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGEL 477
Query: 847 TTILKDDAAAKEFGWNQRMNVIKG--VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904
+ L+ ++F + ++ ++ AL+YL VH DI+++NVL+ +
Sbjct: 478 RSFLQ----VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCV 530
Query: 905 HVSDFGIAKFLNPHSSNWTAFAGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVI-KG 961
+ DFG+++++ S+ + A G + APE + R T DV FGV E++ G
Sbjct: 531 KLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 962 NHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARP 1020
P V N ++I I RLP P + L S+M C P RP
Sbjct: 590 VKPFQGVKNN-----DVIGRIENG--ERLPMPP-NCPPTLYSLM---TKCWAYDPSRRP 637
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI-RHRN 820
+G+G G V AE L V K ++L + ++D + ++E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMN------------V 867
II G C+ +++ EY +G+L L+ + E+ +N N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSNWTAF 925
VA + YL +H D++++NVL+ ++ ++DFG+A+ ++ + T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ APE T + DV SFGVL E+ G P Y ++ E
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKE--- 267
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
HR+ PS + M + + C P RPT K++
Sbjct: 268 --GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQL 302
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 73
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAKG 130
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 131 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 188 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 239
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 240 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 270
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 744 NFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQ 803
+F +FL K I D GE + GK +G AVK + + +AD
Sbjct: 5 HFEKRFL-----KRIRDLGEGH-FGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD- 57
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI--VSEYLDRGSLTTILKDDAAAKEFGW 861
E+ L + H NI+K+ G C+ + I + E+L GSL L + +
Sbjct: 58 --LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINL 113
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
Q++ + + YL VH D++++NVL++SEH+ + DFG+ K +
Sbjct: 114 KQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 170
Query: 922 WTAF----AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
T + F Y APE + DV SFGV E++
Sbjct: 171 XTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 744 NFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQ 803
+F +FL K I D GE + GK +G AVK + + +AD
Sbjct: 17 HFEKRFL-----KRIRDLGEGH-FGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD- 69
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI--VSEYLDRGSLTTILKDDAAAKEFGW 861
E+ L + H NI+K+ G C+ + I + E+L GSL L + +
Sbjct: 70 --LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINL 125
Query: 862 NQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
Q++ + + YL VH D++++NVL++SEH+ + DFG+ K +
Sbjct: 126 KQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 182
Query: 922 WTAF----AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
T + F Y APE + DV SFGV E++
Sbjct: 183 XTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 23/240 (9%)
Query: 783 GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF----HGFCSNAQHSFIVS 838
G I F++ +L E+A E+ ++L I N + + S H F V
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 839 EY------------LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886
Y L +LK F + +AL YLH I
Sbjct: 100 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---I 156
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA--FAGTFGYAAPEIAHMMRATE 944
+H D+ +N+LL+ + ++DFG AK L+P S A F GT Y +PE+ A +
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 216
Query: 945 KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSI 1004
D+ + G + +++ G P + + N I ++ + +RD+++KL+ +
Sbjct: 217 SSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVL 274
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 74
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 131
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 132 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 189 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 240
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 241 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 75
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 132
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 133 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 190 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 241
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 242 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 272
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 76
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 133
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 134 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 191 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 242
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 243 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 273
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 73
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 130
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 131 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 188 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 239
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 240 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 270
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 72
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 129
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 130 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 187 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 238
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 239 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 269
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 799 EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858
E AD +E + E + ++ + I++ G C A+ +V E G L L +E
Sbjct: 376 EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKREE 432
Query: 859 FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918
+ ++ V+ + YL VH +++++NVLL + H A +SDFG++K L
Sbjct: 433 IPVSNVAELLHQVSMGMKYLEEKNF---VHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489
Query: 919 SSNWTAF-AGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHP 964
S +TA AG + + APE + + + + DV S+GV E + G P
Sbjct: 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI-RHRN 820
+G+G G V AE L V K ++L + ++D + ++E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMN------------V 867
II G C+ +++ EY +G+L L+ EF +N N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
VA + YL +H D++++NVL+ ++ ++DFG+A+ ++ G
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 928 TF--GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ APE T + DV SFGVL E+ G P Y ++ E
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKE--- 267
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
HR+ PS + M + + C P RPT K++
Sbjct: 268 --GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQL 302
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 806 FLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAA-AKEFGWNQR 864
F EV +++ H+NI+ ++V EY++ +L+ ++ + + N
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT 117
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA 924
++ G+ +A HD IVH DI +N+L+DS + DFGIAK L+ S T
Sbjct: 118 NQILDGIKHA-----HDM--RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN 170
Query: 925 FA-GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
GT Y +PE A E D++S G++ E++ G P
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ EY +G+L L+ + ++ +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 922 WTAFAGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
G + APE T + DV SFGVL E+ G P Y +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 271
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 272 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ EY +G+L L+ + ++ +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 922 WTAFAGTF--GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
G + APE T + DV SFGVL E+ G P Y +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 271
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 272 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L ++++ H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKLNH 107
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 168 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 222
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V++ E +G AVKK ++ E E++A + I+ +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE---------ELMACAGLTSPRIVPLY 151
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G I E L+ GSL ++K+ E ++ + + L YLH
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQALEGLEYLHSR---R 205
Query: 886 IVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFA-----GTFGYAAPEIAHM 939
I+HGD+ + NVLL S+ A + DFG A L P + GT + APE+
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 940 MRATEKYDVHSFGVLALEVIKGNHP 964
K DV S + L ++ G HP
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 766 CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
IGKG V A + +G AVK + L + + EV + + H NI+K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ ++V EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT- 943
IVH D+ ++N+LLD++ ++DFG + + AF G YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 944 EKYDVHSFGVLALEVIKGNHPRD 966
+ DV S GV+ ++ G+ P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L ++++ H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKLNH 93
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 154 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 208
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEEDLSDLVSEMEMMKMI 97
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ EY +G+L L+ + ++ +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHS 919
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T + APE T + DV SFGVL E+ G P Y +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 271
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 272 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 11/218 (5%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
+ DF IG+G V L + I+A+K +L+ D+ D D E +
Sbjct: 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQ 65
Query: 816 I-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
H ++ H F V EY++ G L ++ E ++ A
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLA 122
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSNWTAFAGTFGYAA 933
L+YLH I++ D+ NVLLDSE ++D+G+ K L P + + F GT Y A
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 178
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
PEI D + GVL E++ G P D V ++
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ EY +G+L L+ + ++ +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHS 919
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINNIDYY 213
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T + APE T + DV SFGVL E+ G P Y +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 271
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 272 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 48/291 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 143
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ EY +G+L L+ + ++ +
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHS 919
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N +
Sbjct: 204 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 259
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T + APE T + DV SFGVL E+ G P Y +
Sbjct: 260 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 317
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
+ E HR+ P+ + M + + C P RPT K++ L
Sbjct: 318 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 359
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 11/218 (5%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
+ DF IG+G V L + I+A+K +L+ D+ D D E +
Sbjct: 3 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQ 61
Query: 816 IR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
H ++ H F V EY++ G L ++ E ++ A
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLA 118
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSNWTAFAGTFGYAA 933
L+YLH I++ D+ NVLLDSE ++D+G+ K L P + + F GT Y A
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 174
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
PEI D + GVL E++ G P D V ++
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 212
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG V + +L +G +A K N++ L D + E ++H NI++ H
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKL--SARDHQKLEREARICRLLKHSNIVRLH 69
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
S ++V + + G L +D A + + + I+ + A+ + H
Sbjct: 70 DSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 123
Query: 886 IVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+VH D+ +N+LL S+ + ++DFG+A + W FAGT GY +PE+
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
+ D+ + GV+ ++ G P
Sbjct: 184 GKPVDIWACGVILYILLVGYPP 205
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 107
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 168 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 222
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 92
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 153 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 207
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 36/271 (13%)
Query: 767 IGKGRQGSVYKA-ELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G G G+VYK +P G I A+K E L+E + + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN---TSPKANKEILDEAYVMAGVGSPYV 81
Query: 822 IKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
+ G C S Q +V++ + G L ++++ G +N +A +SYL
Sbjct: 82 SRLLGICLTSTVQ---LVTQLMPYGCLLDHVRENRG--RLGSQDLLNWCMQIAKGMSYLE 136
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT--FGYAAPEIA 937
L VH D++++NVL+ S + ++DFG+A+ L+ + + A G + A E
Sbjct: 137 DVRL---VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 938 HMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLD--HRLPTPS 994
R T + DV S+GV E++ G P D + EI L+ RLP P
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---------EIPDLLEKGERLPQPP 244
Query: 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+D M + + C + E RP +++
Sbjct: 245 ICTIDVYM----IMVKCWMIDSECRPRFREL 271
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 82
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 83 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 137
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 138 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 195 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 246
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 247 RLPQPPICTIDVYMIMRK----CWMIDADSRPKFREL 279
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 72
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 73 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 127
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 185 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 236
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 237 RLPQPPICTIDVYMIMRK----CWMIDADSRPKFREL 269
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ EY +G+L L+ + ++ +
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHS 919
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T + APE T + DV SFGVL E+ G P Y +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 271
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 272 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 75
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 76 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 130
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 131 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 188 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 239
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 240 RLPQPPICTIDVYMIMRK----CWMIDADSRPKFREL 272
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ EY +G+L L+ + ++ +
Sbjct: 98 GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHS 919
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T + APE T + DV SFGVL E+ G P Y +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 271
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 272 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI-RHRN 820
+G+G G V AE L V K ++L + ++D + ++E+ + I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMN------------V 867
II G C+ +++ EY +G+L L+ E+ +N N
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSNWTAF 925
VA + YL +H D++++NVL+ ++ ++DFG+A+ ++ + T
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ APE T + DV SFGVL E+ G P Y ++ E
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKE--- 259
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
HR+ PS + M + + C P RPT K++
Sbjct: 260 --GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQL 294
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI-RHRN 820
+G+G G V AE L V K ++L + ++D + ++E+ + I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMN------------V 867
II G C+ +++ EY +G+L L+ E+ +N N
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSNWTAF 925
VA + YL +H D++++NVL+ ++ ++DFG+A+ ++ + T
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ APE T + DV SFGVL E+ G P Y ++ E
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKE--- 256
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
HR+ PS + M + + C P RPT K++
Sbjct: 257 --GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQL 291
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI-RHRN 820
+G+G G V AE L V K ++L + ++D + ++E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMN------------V 867
II G C+ +++ EY +G+L L+ E+ +N N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSNWTAF 925
VA + YL +H D++++NVL+ ++ ++DFG+A+ ++ + T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ APE T + DV SFGVL E+ G P Y ++ E
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKE--- 267
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
HR+ PS + M + + C P RPT K++
Sbjct: 268 --GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQL 302
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI-RHRN 820
+G+G G V AE L V K ++L + ++D + ++E+ + I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMN------------V 867
II G C+ +++ EY +G+L L+ E+ +N N
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSNWTAF 925
VA + YL +H D++++NVL+ ++ ++DFG+A+ ++ + T
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ APE T + DV SFGVL E+ G P Y ++ E
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKE--- 260
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
HR+ PS + M + + C P RPT K++
Sbjct: 261 --GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQL 295
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 109
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 110 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 170 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 224
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 100/206 (48%), Gaps = 27/206 (13%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G VYKA+ G I A+K+ +L ++ + E+ L E+ H NI+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI--RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKD------DAAAKEFGWNQRMNVIKGVANALSYLHH 880
+ + +V E++++ L +L + D+ K + + +++GVA+ +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQ----LLRGVAHCHQHR-- 139
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
I+H D+ +N+L++S+ ++DFG+A+ ++T T Y AP++ +
Sbjct: 140 -----ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV---L 191
Query: 941 RATEKY----DVHSFGVLALEVIKGN 962
++KY D+ S G + E+I G
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 84
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 85 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 145 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 199
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 133
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + + + G
Sbjct: 194 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRAGYYRKGGCAML 248
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 11/218 (5%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
+ DF IG+G V L + I+A+K +L+ D+ D D E +
Sbjct: 18 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQ 76
Query: 816 IR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
H ++ H F V EY++ G L ++ E ++ A
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLA 133
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSNWTAFAGTFGYAA 933
L+YLH I++ D+ NVLLDSE ++D+G+ K L P + + F GT Y A
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 189
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
PEI D + GVL E++ G P D V ++
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 227
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D + + +GKG G V + +G AVK S+ + D++ L EV L ++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLD 84
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
H NI K + F + + ++V E G L + + K F +I+ V + ++Y
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
H + IVH D+ +N+LL+S+ + + DFG++ S GT Y AP
Sbjct: 142 XHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYIAP 197
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
E+ H EK DV S GV+ ++ G P
Sbjct: 198 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 100/206 (48%), Gaps = 27/206 (13%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G+G G VYKA+ G I A+K+ +L ++ + E+ L E+ H NI+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI--RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKD------DAAAKEFGWNQRMNVIKGVANALSYLHH 880
+ + +V E++++ L +L + D+ K + + +++GVA+ +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQ----LLRGVAHCHQHR-- 139
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM 940
I+H D+ +N+L++S+ ++DFG+A+ ++T T Y AP++ +
Sbjct: 140 -----ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV---L 191
Query: 941 RATEKY----DVHSFGVLALEVIKGN 962
++KY D+ S G + E+I G
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 92
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 93 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 153 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 207
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 99
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 160 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 214
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IGKG V A + +G AVK + L + + EV + H NI+K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ ++V EY G + L KE + + + +A+ Y H
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKE---KEARAKFRQIVSAVQYCHQKF--- 133
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT-E 944
IVH D+ ++N+LLD++ ++DFG + + AF G YAAPE+ +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 945 KYDVHSFGVLALEVIKGNHPRD 966
+ DV S GV+ ++ G+ P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 79
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 80 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 134
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG AK L + A G
Sbjct: 135 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 192 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 243
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 244 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 276
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 72
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 73 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 127
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG AK L + A G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 185 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 236
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 237 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 269
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 93
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 154 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 208
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 794 QLLFDEMADQD--EFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTIL 850
++L D+ ++D + ++E+ + I +H+NII G C+ +++ EY +G+L L
Sbjct: 60 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 119
Query: 851 K-------------DDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNV 896
+ + ++ + ++ +A + YL C +H D++++NV
Sbjct: 120 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLTARNV 175
Query: 897 LLDSEHEAHVSDFGIAKFLN--PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
L+ + ++DFG+A+ +N + T + APE T + DV SFGVL
Sbjct: 176 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 235
Query: 955 ALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLV 1013
E+ G P Y ++ E HR+ P+ + M + + C
Sbjct: 236 MWEIFTLGGSP--YPGIPVEELFKLLKE-----GHRMDKPANCTNELYMMMRD----CWH 284
Query: 1014 ESPEARPTMKKV 1025
P RPT K++
Sbjct: 285 AVPSQRPTFKQL 296
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 110
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + + + G
Sbjct: 171 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRAGYYRKGGCAML 225
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 794 QLLFDEMADQD--EFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTIL 850
++L D+ ++D + ++E+ + I +H+NII G C+ +++ EY +G+L L
Sbjct: 65 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 124
Query: 851 K-------------DDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNV 896
+ + ++ + ++ +A + YL C +H D++++NV
Sbjct: 125 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNV 180
Query: 897 LLDSEHEAHVSDFGIAKFLN--PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
L+ + ++DFG+A+ +N + T + APE T + DV SFGVL
Sbjct: 181 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 240
Query: 955 ALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLV 1013
E+ G P Y ++ E HR+ P+ + M + + C
Sbjct: 241 MWEIFTLGGSP--YPGIPVEELFKLLKE-----GHRMDKPANCTNELYMMMRD----CWH 289
Query: 1014 ESPEARPTMKKV 1025
P RPT K++
Sbjct: 290 AVPSQRPTFKQL 301
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 794 QLLFDEMADQD--EFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTIL 850
++L D+ ++D + ++E+ + I +H+NII G C+ +++ EY +G+L L
Sbjct: 62 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 121
Query: 851 K-------------DDAAAKEFGWNQRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNV 896
+ + ++ + ++ +A + YL C +H D++++NV
Sbjct: 122 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNV 177
Query: 897 LLDSEHEAHVSDFGIAKFLN--PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
L+ + ++DFG+A+ +N + T + APE T + DV SFGVL
Sbjct: 178 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 237
Query: 955 ALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLV 1013
E+ G P Y ++ E HR+ P+ + M + + C
Sbjct: 238 MWEIFTLGGSP--YPGIPVEELFKLLKE-----GHRMDKPANCTNELYMMMRD----CWH 286
Query: 1014 ESPEARPTMKKV 1025
P RPT K++
Sbjct: 287 AVPSQRPTFKQL 298
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 11/218 (5%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
+ DF IG+G V L + I+A++ +L+ D+ D D E +
Sbjct: 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-EDIDWVQTEKHVFEQ 108
Query: 816 IR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
H ++ H F V EY++ G L ++ E ++ A
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLA 165
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF-LNPHSSNWTAFAGTFGYAA 933
L+YLH I++ D+ NVLLDSE ++D+G+ K L P + T F GT Y A
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIA 221
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
PEI D + GVL E++ G P D V ++
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 259
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVYSEQDELDFLMEALIISKFNH 107
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 168 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 222
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG V + ++ +G +A K N++ L D + E ++H NI++ H
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVRLH 87
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
S H +++ + + G L +D A + + + I+ + A+ + H
Sbjct: 88 DSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 141
Query: 886 IVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+VH D+ +N+LL S+ + ++DFG+A + W FAGT GY +PE+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
+ D+ + GV+ ++ G P
Sbjct: 202 GKPVDLWACGVILYILLVGYPP 223
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 220 LNSLSILDLSQNQLRGSIPFSL-ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
L L +L L+ N+L+ ++P + L NL L++ N L V L +L EL L
Sbjct: 60 LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDR 118
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
NQL P F +L+ LT +SL N L L +L EL LY NQL V +
Sbjct: 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFD 178
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLEL 372
L+ L+TL L DN VP G SL KL++
Sbjct: 179 KLTELKTLKL-DNNQLKRVPE--GAFDSLEKLKM 209
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 84/204 (41%), Gaps = 26/204 (12%)
Query: 368 SKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFG 427
KL+L N LS + + LTKL L+ + +N L L F+ L +LE L N L
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA 99
Query: 428 KVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SK 486
F NL L L +N L S+PP + DS +K
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLK-------------------------SLPPRVFDSLTK 134
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
L L L N + F+KL SL +L L NQL F LTEL+ L L N+L
Sbjct: 135 LTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFN 570
+ +L KL L L N ++
Sbjct: 195 RVPEGAFDSLEKLKMLQLQENPWD 218
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285
LDL N+L + L+ L +LYL N L + LK+L L +++N+L ++
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL-QAL 100
Query: 286 PLS-FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLR 344
P+ F L +L + L N L P +L L+ L L N+L + L+SL+
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK 160
Query: 345 TLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN 399
L LY+N + L L L+L N L V + +L KL ++ + EN
Sbjct: 161 ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK-LQVLDLSSNHIVGK 500
LDL N L S + KL + N + ++P I K L+ L ++ N +
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQA- 99
Query: 501 IPVQ-FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM-GNLSK 558
+P+ F++L +L +L L+ NQL P F SLT+L YL L N+L S+PK + L+
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL-QSLPKGVFDKLTS 158
Query: 559 LHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
L L L NNQ F+KL L L L +N L+
Sbjct: 159 LKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332
+LDL N+L +F L+ L L+ L +N L
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-------------------------T 75
Query: 333 IPPSI-GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKL 391
+P I L +L TL++ DN L L +L++L L RN L + P +LTKL
Sbjct: 76 LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKL 135
Query: 392 VLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
+++ N L L F LTSL+ LR N L AF L L L N L
Sbjct: 136 TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 85/203 (41%), Gaps = 24/203 (11%)
Query: 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG 187
+ LDL +N+LS + + LT LR+LY + N L ++P I K L N+ TL +
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFK-ELKNLETLWVTDNKL 97
Query: 188 RIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL 247
+ P +G V L +L+ L L +NQL+ P +L+ L
Sbjct: 98 QALP-IG---------------------VFDQLVNLAELRLDRNQLKSLPPRVFDSLTKL 135
Query: 248 GILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307
L L N L V L SL EL L NQL +F L+ L + L NN L
Sbjct: 136 TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195
Query: 308 SIPPTQGNLEALSELGLYINQLD 330
+LE L L L N D
Sbjct: 196 VPEGAFDSLEKLKMLQLQENPWD 218
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 82/219 (37%), Gaps = 26/219 (11%)
Query: 373 CRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEA 432
C + IP +I TK + ++ N L L K+F LT L L N N L
Sbjct: 23 CSSKKLTAIPSNIPADTKKL--DLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGI 80
Query: 433 FGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDL 492
F + NL L ++ N L P +G F+ +N L L L
Sbjct: 81 FKELKNLETLWVTDNKLQA--------LP-IGVFDQLVN---------------LAELRL 116
Query: 493 SSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKS 552
N + P F+ L L L L N+L F LT L+ L L N+L +
Sbjct: 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGA 176
Query: 553 MGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L++L L L NNQ F+ L L L L N
Sbjct: 177 FDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 24/130 (18%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
KL L N+LS F LT+L+ L L+ NKL + L L L +++N+
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 573 IPTEFEKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLS 632
F++L++L+EL L N L+ +PP++ F+ + L+
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKS-LPPRV-----------------------FDSLTKLT 136
Query: 633 RIDIAYNELQ 642
+ + YNELQ
Sbjct: 137 YLSLGYNELQ 146
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 28/66 (42%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156
F S L YL+L N L L+ L+ L L NNQL V LT L+ L
Sbjct: 129 FDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKL 188
Query: 157 DVNHLH 162
D N L
Sbjct: 189 DNNQLK 194
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 119
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 180 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 234
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 22/205 (10%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V++ E +G AVKK ++ E E++A + I+ +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE---------ELMACAGLTSPRIVPLY 132
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G I E L+ GSL ++K+ E ++ + + L YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQALEGLEYLHSR---R 186
Query: 886 IVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFAGTF-----GYAAPEIAHM 939
I+HGD+ + NVLL S+ A + DFG A L P G + + APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 940 MRATEKYDVHSFGVLALEVIKGNHP 964
K DV S + L ++ G HP
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 766 CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
IGKG V A + +G AVK + L + + EV + + H NI+K
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ ++V EY G + L KE + + + +A+ Y H
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKE---KEARAKFRQIVSAVQYCHQKF-- 126
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT- 943
IVH D+ ++N+LLD++ ++DFG + + F G+ YAAPE+ +
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 944 EKYDVHSFGVLALEVIKGNHPRD 966
+ DV S GV+ ++ G+ P D
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 74
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 131
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG AK L + A G
Sbjct: 132 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 189 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 240
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 241 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 271
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 76
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 133
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG AK L + A G
Sbjct: 134 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 191 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 242
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 243 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 273
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 766 CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
IGKG V A + +G AVK + L + + EV + + H NI+K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ ++V EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT- 943
IVH D+ ++N+LLD++ ++DFG + + F G+ YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 944 EKYDVHSFGVLALEVIKGNHPRD 966
+ DV S GV+ ++ G+ P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 766 CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
IGKG V A + +G AVK + L + + EV + + H NI+K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ ++V EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT- 943
IVH D+ ++N+LLD++ ++DFG + + F G+ YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 944 EKYDVHSFGVLALEVIKGNHPRD 966
+ DV S GV+ ++ G+ P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDE--FLNEVLALTEIRH 818
+G G G VY+ ++ PS + AVK L + ++QDE FL E L +++ H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 93
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANA 874
+NI++ G + FI+ E + G L + L++ + ++V + +A
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
YL + +H DI+++N LL A + DFG+A+ + + +++ G
Sbjct: 154 CQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI--YRASYYRKGGCAML 208
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ PE T K D SFGVL E+
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 73
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 125
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P + +
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPI 181
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 182 FWY-APESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 786 FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGS 845
+A K N++ L D + E ++H NI++ H S ++V + + G
Sbjct: 59 YAAKIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 116
Query: 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEA 904
L +D A + + + I + +++++H HD IVH D+ +N+LL S+ +
Sbjct: 117 L---FEDIVAREYYSEADASHCIHQILESVNHIHQHD----IVHRDLKPENLLLASKCKG 169
Query: 905 ---HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG 961
++DFG+A + W FAGT GY +PE+ + D+ + GV+ ++ G
Sbjct: 170 AAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
Query: 962 NHP 964
P
Sbjct: 230 YPP 232
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 782 SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYL 841
+G +FA+K F + + + NE+ L +I+H NI+ + H ++V + +
Sbjct: 33 TGKLFALKCIKKSPAFRDSSLE----NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88
Query: 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901
G L + + E VI+ V +A+ YLH + IVH D+ +N+L +
Sbjct: 89 SGGELFDRILERGVYTE---KDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTP 142
Query: 902 HE---AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
E ++DFG++K + + GT GY APE+ ++ D S GV+ +
Sbjct: 143 EENSKIMITDFGLSKM--EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYIL 200
Query: 959 IKGNHP 964
+ G P
Sbjct: 201 LCGYPP 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI-RHRN 820
+G+G G V AE L V K ++L + ++D + ++E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMN------------V 867
II G C+ +++ EY +G+L L+ E+ +N N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSNWTAF 925
VA + YL +H D++++NVL+ ++ ++DFG+A+ ++ + T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ APE T + DV SFGVL E+ G P Y ++ E
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKE--- 267
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
HR+ PS + M + + C P RPT K++
Sbjct: 268 --GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQL 302
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 767 IGKGRQGSVYKAE---LPSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI-RHRN 820
+G+G G V AE L V K ++L + ++D + ++E+ + I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-DDAAAKEFGWNQRMN------------V 867
II G C+ +++ EY +G+L L+ E+ +N N
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHSSNWTAF 925
VA + YL +H D++++NVL+ ++ ++DFG+A+ ++ + T
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ APE T + DV SFGVL E+ G P Y ++ E
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKE--- 252
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
HR+ PS + M + + C P RPT K++
Sbjct: 253 --GHRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQL 287
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + + G G+VYK +P G I A+K+ E L+E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 79
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 80 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 134
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 135 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 192 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 243
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 244 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 276
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + + G G+VYK +P G I A+K+ E L+E +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 72
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 73 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 127
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 185 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 236
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 237 RLPQPPICTIDVYM----IMVKCWMIDADSRPKFREL 269
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 72
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 124
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 125 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 180
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 181 FWY-APESLTESKFSVASDVWSFGVVLYEL 209
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 71
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 123
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 124 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 179
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 180 FWY-APESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 73
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 125
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 181
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 182 FWY-APESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 73
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 125
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 181
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 182 FWY-APESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 91
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--------ERIDHIKLLQYTSQICK 143
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 199
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 200 FWY-APESLTESKFSVASDVWSFGVVLYEL 228
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 23/224 (10%)
Query: 757 AIDDFGEKY----CIGKGRQGSVYK-AELPSGIIFAVK--KFNSQLLFDEMADQ--DEFL 807
A +F +KY IG+G V + +G FAVK + ++ L E ++ +
Sbjct: 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR 147
Query: 808 NEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
E L ++ H +II ++ F+V + + +G L L + A E + +
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE---KETRS 204
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA 926
+++ + A+S+LH + IVH D+ +N+LLD + +SDFG + L P
Sbjct: 205 IMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELC 260
Query: 927 GTFGYAAPEIAHM-MRAT-----EKYDVHSFGVLALEVIKGNHP 964
GT GY APEI M T ++ D+ + GV+ ++ G+ P
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
+ EV + + H NI+K + +++ EY G + L KE +
Sbjct: 60 KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEA 116
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA 924
+ + + +A+ Y H IVH D+ ++N+LLD++ ++DFG + A
Sbjct: 117 RSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDA 172
Query: 925 FAGTFGYAAPEIAHMMRAT-EKYDVHSFGVLALEVIKGNHPRD 966
F G YAAPE+ + + DV S GV+ ++ G+ P D
Sbjct: 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G GR G V+K E +G+ A K ++ M D++E NE+ + ++ H N+I+ +
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTR----GMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI--KGVANALSYLHHDCL 883
+ +V EY+D G L + D++ + + ++ K + + ++H
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDES----YNLTELDTILFMKQICEGIRHMHQ--- 205
Query: 884 PPIVHGDISSKNVLLDSEHEAHVS--DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
I+H D+ +N+L + + DFG+A+ P F GT + APE+ +
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDF 264
Query: 942 ATEKYDVHSFGVLALEVIKGNHP 964
+ D+ S GV+A ++ G P
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 104
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 156
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 157 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 212
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 213 FWY-APESLTESKFSVASDVWSFGVVLYEL 241
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 77
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 129
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 130 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 185
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 186 FWY-APESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 91
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 143
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 199
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 200 FWY-APESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + + G G+VYK +P G I A+K+ E L+E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 79
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 136
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG+AK L + A G
Sbjct: 137 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 194 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 245
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 246 PQPPICTIDVYM----IMVKCWMIDADSRPKFREL 276
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 112/280 (40%), Gaps = 38/280 (13%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLN-------EV 810
++D+ +G+G G V AV + + + ++ D ++ E+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI 56
Query: 811 LALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVI 868
+ H N++KF+G ++ EY G L ++ D E QR ++
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM 115
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFA 926
GV YLH I H DI +N+LLD +SDFG+A N
Sbjct: 116 AGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 927 GTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985
GT Y APE+ E DV S G++ ++ G P D S + +S+ E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTY 227
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
L+ P + + ++++ LVE+P AR T+ +
Sbjct: 228 LN-----PWKKIDSAPLALLHK---ILVENPSARITIPDI 259
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 76
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 128
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 184
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 185 FWY-APESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 78
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 130
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 131 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 186
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 187 FWY-APESLTESKFSVASDVWSFGVVLYEL 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 79
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 131
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 132 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 187
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 188 FWY-APESLTESKFSVASDVWSFGVVLYEL 216
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 43/231 (18%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
DF E +G+G G V KA +A+KK L+EV+ L + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNH 61
Query: 819 RNIIKFHGF-------------CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM 865
+ +++++ FI EY + G+L ++ + ++ ++
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR--DEYW 119
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH------- 918
+ + + ALSY+H I+H D+ N+ +D + DFG+AK N H
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK--NVHRSLDILK 174
Query: 919 ---------SSNWTAFAGTFGYAAPEIAH-MMRATEKYDVHSFGVLALEVI 959
S N T+ GT Y A E+ EK D++S G++ E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 80
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 132
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 133 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 188
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 189 FWY-APESLTESKFSVASDVWSFGVVLYEL 217
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 41/282 (14%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLN-------EV 810
++D+ +G+G G V AV + + + ++ D ++ E+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI 55
Query: 811 LALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVI 868
+ H N++KF+G ++ EY G L ++ D E QR ++
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLM 114
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFA 926
GV YLH I H DI +N+LLD +SDFG+A N
Sbjct: 115 AGVV----YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 927 GTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985
GT Y APE+ E DV S G++ ++ G P D S + +S+ E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTY 226
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR---PTMKK 1024
L+ P + + ++++ LVE+P AR P +KK
Sbjct: 227 LN-----PWKKIDSAPLALLHK---ILVENPSARITIPDIKK 260
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 766 CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
IGKG V A + +G AV+ + L + + EV + + H NI+K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ ++V EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT- 943
IVH D+ ++N+LLD++ ++DFG + + F G+ YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 944 EKYDVHSFGVLALEVIKGNHPRD 966
+ DV S GV+ ++ G+ P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 33/231 (14%)
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI-PLS---------- 288
+L NL+NL LYL ++++ P + NL + L+L N + PLS
Sbjct: 105 ALQNLTNLRELYLNEDNISDISP--LANLTKXYSLNLGANHNLSDLSPLSNXTGLNYLTV 162
Query: 289 ----------FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
+NL+ L +SL N + P +L +L Y+NQ+ + P +
Sbjct: 163 TESKVKDVTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VA 218
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398
N + L +L + +N L P + L L+ LE+ N +S + +++ +LTKL +N+
Sbjct: 219 NXTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKXLNVGS 274
Query: 399 NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
N + + NL+ L L N N L + E G NLT L LSQN++
Sbjct: 275 NQISDI--SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHI 323
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 19/283 (6%)
Query: 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVN 159
+L YLNL+ N + +I P +SNL KL L +G N+++ + + +LT LR LY + +
Sbjct: 65 LTNLEYLNLNGNQI-TDISP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNED 120
Query: 160 HLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGN 219
++ PL L+ L L N+ + P L P + N
Sbjct: 121 NISDISPL--ANLTKXYSLNLGANHNLSDLSP-LSNXTGLNYLTVTESKVKDVTP--IAN 175
Query: 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279
L L L L+ NQ+ P LA+L++L Y N + P + N L L + N
Sbjct: 176 LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNN 231
Query: 280 QLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339
++ PL+ NLS LT + + N +S I + +L L L + NQ+ + + N
Sbjct: 232 KITDLSPLA--NLSQLTWLEIGTNQIS-DINAVK-DLTKLKXLNVGSNQISDI--SVLNN 285
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIP 382
LS L +L+L +N IG L +L+ L L +NH++ + P
Sbjct: 286 LSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 21/279 (7%)
Query: 316 LEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN 375
L L L L NQ+ + P + NL L LY+ N + + + L +L +L L +
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNED 120
Query: 376 HLSGVIPHSIGNLTKLVLVNMCENH-LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFG 434
++S + P + NLTK +N+ NH L L P S N T L L ++ + K
Sbjct: 121 NISDISP--LANLTKXYSLNLGANHNLSDLSPLS--NXTGLNYLTVTESKV--KDVTPIA 174
Query: 435 DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
+ +L L L+ N + +IS + L F A +N I P + + ++L L + +
Sbjct: 175 NLTDLYSLSLNYNQIE-DISP-LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGN 230
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMG 554
N I P L L L + NQ+S ++ LT+L+ L++ +N++S +
Sbjct: 231 NKITDLSP--LANLSQLTWLEIGTNQISDINAVK--DLTKLKXLNVGSNQISD--ISVLN 284
Query: 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
NLS+L+ L L+NNQ ++ L +L+ L LS N +
Sbjct: 285 NLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHI 323
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 13/201 (6%)
Query: 89 NGTFQDFS-FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGH 147
N D S S+ L YL ++ + + P I+NL+ L +L L NQ+ + P +
Sbjct: 142 NHNLSDLSPLSNXTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LAS 197
Query: 148 LTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXX 207
LT L VN + P + + +N L + +N + P +
Sbjct: 198 LTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNNKITDLSPLA---NLSQLTWLEIGT 252
Query: 208 XXFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGN 267
I N + +L L L++ NQ+ S L NLS L L+L N L VIG
Sbjct: 253 NQISDI-NAVKDLTKLKXLNVGSNQI--SDISVLNNLSQLNSLFLNNNQLGNEDXEVIGG 309
Query: 268 LKSLFELDLSENQLFGSIPLS 288
L +L L LS+N + PL+
Sbjct: 310 LTNLTTLFLSQNHITDIRPLA 330
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+E NE+ L + H NIIK + ++ ++V+E+ + G L + +F
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI---INRHKFDEC 146
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHS 919
N++K + + + YLH IVH DI +N+LL++++ + DFG++ F +
Sbjct: 147 DAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-D 202
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
GT Y APE+ + EK DV S GV+ ++ G P
Sbjct: 203 YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 119
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 120 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 229
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 230 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 259
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 119
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 120 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 229
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 230 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 259
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 117
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 118 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 227
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 228 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 257
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1
Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human Chk1
Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 119
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 120 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 229
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 230 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 259
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 119
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 120 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 229
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 230 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 259
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 119
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 120 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 229
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 230 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 259
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 119
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 120 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 229
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 230 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 259
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
+IV EY+D +L I+ + + + VI AL++ H + I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 895 NVLLDSEHEAHVSDFGIAKFLNPHSSNWT---AFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+++ + + V DFGIA+ + ++ T A GT Y +PE A + DV+S
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL- 1010
G + EV+ G P T S S + ++ P P + L + ++ +L
Sbjct: 206 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRED-----PIPPSARHEGLSADLDAVVLK 256
Query: 1011 CLVESPEAR 1019
L ++PE R
Sbjct: 257 ALAKNPENR 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
+IV EY+D +L I+ + + + VI AL++ H + I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 895 NVLLDSEHEAHVSDFGIAKFLNPHSSNWT---AFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+++ + + V DFGIA+ + ++ T A GT Y +PE A + DV+S
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL- 1010
G + EV+ G P T S S + ++ P P + L + ++ +L
Sbjct: 206 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRED-----PIPPSARHEGLSADLDAVVLK 256
Query: 1011 CLVESPEAR 1019
L ++PE R
Sbjct: 257 ALAKNPENR 265
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLF-DEMADQDEFLNEVLALTEIR 817
DF +GKG G V A+ + ++A+K ++ D+ + VLAL + +
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD-K 78
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ + H + V EY++ G L ++ KE Q + ++ L +
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISIGLFF 135
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH I++ D+ NV+LDSE ++DFG+ K F GT Y APEI
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII 192
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRD 966
+ D ++GVL E++ G P D
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
+IV EY+D +L I+ + + + VI AL++ H + I+H D+
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 162
Query: 895 NVLLDSEHEAHVSDFGIAKFLNPHSSNWT---AFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+++ + + V DFGIA+ + ++ T A GT Y +PE A + DV+S
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL- 1010
G + EV+ G P T S S + ++ P P + L + ++ +L
Sbjct: 223 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRED-----PIPPSARHEGLSADLDAVVLK 273
Query: 1011 CLVESPEAR 1019
L ++PE R
Sbjct: 274 ALAKNPENR 282
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb
Length = 311
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
+IV EY+D +L I+ + + + VI AL++ H + I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 895 NVLLDSEHEAHVSDFGIAKFLNPHSSNWT---AFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+++ + + V DFGIA+ + ++ T A GT Y +PE A + DV+S
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL- 1010
G + EV+ G P T S S + ++ P P + L + ++ +L
Sbjct: 206 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRED-----PIPPSARHEGLSADLDAVVLK 256
Query: 1011 CLVESPEAR 1019
L ++PE R
Sbjct: 257 ALAKNPENR 265
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 112/282 (39%), Gaps = 36/282 (12%)
Query: 758 IDDFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+ D GE IG+G GSV K PSG I AVK+ S + DE + ++ + +
Sbjct: 24 LKDLGE---IGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSS 78
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRG------SLTTILKDDAAAKEFGWNQRMNVIKG 870
I++F+G +I E + + ++L D + G +
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITLA 133
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
AL++L + I+H DI N+LLD + DFGI+ L S T AG
Sbjct: 134 TVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRP 190
Query: 931 YAAPEIAHMMRATEKYDVH----SFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986
Y APE + + YDV S G+ E+ G P ++ F + ++ L
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL 250
Query: 987 ---DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ R +P S + LCL + RP K++
Sbjct: 251 SNSEEREFSP---------SFINFVNLCLTKDESKRPKYKEL 283
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 27/231 (11%)
Query: 740 SSVLNFNGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFD 798
SS ++ + LY + ++ ++ G +G+G G V K +G I A+KKF
Sbjct: 9 SSGVDLGTENLYFQSMEKYENLG---LVGEGSYGMVMKCRNKDTGRIVAIKKFLE----- 60
Query: 799 EMADQDEF-----LNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD- 852
+D D+ + E+ L ++RH N++ C + ++V E++D TIL D
Sbjct: 61 --SDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH----TILDDL 114
Query: 853 DAAAKEFGWNQRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911
+ + + + N + + H H+ I+H DI +N+L+ + DFG
Sbjct: 115 ELFPNGLDYQVVQKYLFQIINGIGFCHSHN----IIHRDIKPENILVSQSGVVKLCDFGF 170
Query: 912 AKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRATEKYDVHSFGVLALEVIKG 961
A+ L + T Y APE + ++ + DV + G L E+ G
Sbjct: 171 ARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 74
Query: 815 EIRHRNIIKFHGFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + ++ + G C S Q ++++ + G L +++ G +N +A
Sbjct: 75 SVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIA 129
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
++YL L VH D++++NVL+ + ++DFG AK L + A G
Sbjct: 130 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
A I H + T + DV S+GV E++ G+ P D + S S+++ +
Sbjct: 187 WMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GE 238
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RLP P +D M + + C + ++RP +++
Sbjct: 239 RLPQPPICTIDVYMIMRK----CWMIDADSRPKFREL 271
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 74
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ EYL GSL L+ +R++ IK +
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQICK 126
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H +++++N+L+++E+ + DFG+ K L P + +
Sbjct: 127 GMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVL-PQDKEYYKVKEPGESPI 182
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 183 FWY-APESLTESKFSVASDVWSFGVVLYEL 211
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG G V A + +G + A+K + L +D E+ AL +RH++I + +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLY 74
Query: 826 GFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
A F+V EY G L I+ D ++E + V + + +A++Y+H
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQDRLSEE----ETRVVFRQIVSAVAYVHSQ--- 127
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGI-AKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRA 942
H D+ +N+L D H+ + DFG+ AK + G+ YAAPE I
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 943 TEKYDVHSFGVLALEVIKGNHPRD 966
+ DV S G+L ++ G P D
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 118
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 119 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 228
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 229 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 258
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM--NVIKGVAN 873
+ H N++KF+G ++ EY G L ++ D E QR ++ GV
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV- 119
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFAGTFGY 931
YLH I H DI +N+LLD +SDFG+A N GT Y
Sbjct: 120 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 932 AAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
APE+ E DV S G++ ++ G P D S + +S+ E L+
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLN--- 229
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P + + ++++ LVE+P AR T+ +
Sbjct: 230 --PWKKIDSAPLALLHK---ILVENPSARITIPDI 259
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 766 CIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
IGKG V A + +G AV+ + L + + EV + + H NI+K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
+ ++V EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQYCHQKF-- 133
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT- 943
IVH D+ ++N+LLD++ ++DFG + + F G+ YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 944 EKYDVHSFGVLALEVIKGNHPRD 966
+ DV S GV+ ++ G+ P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP
DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
+IV EY+D +L I+ + + + VI AL++ H + I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 895 NVLLDSEHEAHVSDFGIAKFLNPHSSNWT---AFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+++ + + V DFGIA+ + ++ T A GT Y +PE A + DV+S
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL- 1010
G + EV+ G P S + ++ ++ + P P + L + ++ +L
Sbjct: 206 GCVLYEVLTGEPPFTGDSPDSVAYQHVRED---------PIPPSARHEGLSADLDAVVLK 256
Query: 1011 CLVESPEAR 1019
L ++PE R
Sbjct: 257 ALAKNPENR 265
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 65/287 (22%), Positives = 119/287 (41%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ Y +G+L L+ + ++ +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHS 919
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T + APE T + DV SFGVL E+ G P Y +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 271
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 272 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y IG G GSV A + +G+ AVKK + F +
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 70
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--- 181
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+F + +G G G+VYK +P G I A+K+ E L+E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMA 74
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
+ + ++ + G C + I+ + + G L +++ G +N +A
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKG 131
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG---Y 931
++YL L VH D++++NVL+ + ++DFG AK L + A G
Sbjct: 132 MNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990
A I H + T + DV S+GV E++ G+ P D + S S+++ + RL
Sbjct: 189 ALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK-----GERL 240
Query: 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
P P +D M + + C + ++RP +++
Sbjct: 241 PQPPICTIDVYMIMRK----CWMIDADSRPKFREL 271
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 16/230 (6%)
Query: 743 LNFNGKFLYEEIIKAI--DDFGEKYC-IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDE 799
L F YE + + + +DF E +G G G VYKA+ + A K +E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
+ D ++ E+ L H NI+K + +I+ E+ G++ ++ + +
Sbjct: 78 LED---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPL 132
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+Q V K +AL+YLH + I+H D+ + N+L + + ++DFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATE-----KYDVHSFGVLALEVIKGNHP 964
+F GT + APE+ + + K DV S G+ +E+ + P
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 16/192 (8%)
Query: 782 SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH------SF 835
+G A+K+ +L +++ + E+ + ++ H N++ Q
Sbjct: 38 TGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 94
Query: 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKN 895
+ EY + G L L ++ +++AL YLH + I+H D+ +N
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPEN 151
Query: 896 VLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFG 952
++L + + D G AK L+ T F GT Y APE+ + T D SFG
Sbjct: 152 IVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 953 VLALEVIKGNHP 964
LA E I G P
Sbjct: 211 TLAFECITGFRP 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 10 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 67
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--- 178
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G V++ E +G +F K N+ D+ + NE+ + ++ H +I H
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK----NEISIMNQLHHPKLINLH 114
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR--MNVIKGVANALSYLHHDCL 883
+ ++ E+L G L D AA+++ ++ +N ++ L ++H
Sbjct: 115 DAFEDKYEMVLILEFLSGGELF----DRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS- 169
Query: 884 PPIVHGDISSKNVLLDSEHEAHVS--DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR 941
IVH DI +N++ +++ + V DFG+A LNP A T +AAPEI
Sbjct: 170 --IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDREP 226
Query: 942 ATEKYDVHSFGVLALEVIKGNHP 964
D+ + GVL ++ G P
Sbjct: 227 VGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 16/192 (8%)
Query: 782 SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH------SF 835
+G A+K+ +L +++ + E+ + ++ H N++ Q
Sbjct: 39 TGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 95
Query: 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKN 895
+ EY + G L L ++ +++AL YLH + I+H D+ +N
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPEN 152
Query: 896 VLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFG 952
++L + + D G AK L+ T F GT Y APE+ + T D SFG
Sbjct: 153 IVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 953 VLALEVIKGNHP 964
LA E I G P
Sbjct: 212 TLAFECITGFRP 223
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR 864
+ EV + + H NI+K + +++ EY G + L KE +
Sbjct: 57 KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEA 113
Query: 865 MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTA 924
+ + + +A+ Y H IVH D+ ++N+LLD++ ++DFG +
Sbjct: 114 RSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDT 169
Query: 925 FAGTFGYAAPEIAHMMRAT-EKYDVHSFGVLALEVIKGNHPRD 966
F G+ YAAPE+ + + DV S GV+ ++ G+ P D
Sbjct: 170 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 19 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 76
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 134 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--- 187
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 16/230 (6%)
Query: 743 LNFNGKFLYEEIIKAI--DDFGEKYC-IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDE 799
L F YE + + + +DF E +G G G VYKA+ + A K +E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
+ D ++ E+ L H NI+K + +I+ E+ G++ ++ + +
Sbjct: 78 LED---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPL 132
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+Q V K +AL+YLH + I+H D+ + N+L + + ++DFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 189
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATE-----KYDVHSFGVLALEVIKGNHP 964
+F GT + APE+ + + K DV S G+ +E+ + P
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 6 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 63
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 64 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 120
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 121 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 174
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 175 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 108/282 (38%), Gaps = 59/282 (20%)
Query: 767 IGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IGKG G VY E + I A+K + EM + FL E L + + H N++
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR---ITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 823 KFHGFCSNAQH-SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-------VANA 874
G + ++ Y+ G L ++ QR +K VA
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP---------QRNPTVKDLISFGLQVARG 136
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL----------NPHSS---N 921
+ YL VH D++++N +LD V+DFG+A+ + + H+
Sbjct: 137 MEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 922 WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981
WTA E R T K DV SFGVL E++ P Y + ++ + +
Sbjct: 194 WTAL---------ESLQTYRFTTKSDVWSFGVLLWELLTRGAP-PYRHIDPFDLTHFLAQ 243
Query: 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMK 1023
RLP P D L +M+ C P RPT +
Sbjct: 244 -----GRRLPQPEY-CPDSLYQVMQ---QCWEADPAVRPTFR 276
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 14 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 71
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--- 182
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFI--VSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
E+ L + H +IIK+ G C +A + + V EY+ GSL +D G Q +
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL----RDYLPRHSIGLAQLLL 138
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF- 925
+ + ++YLH +H D++++NVLLD++ + DFG+AK + +
Sbjct: 139 FAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRE 195
Query: 926 ---AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
+ F Y APE + DV SFGV E++
Sbjct: 196 DGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 11/211 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
I ++ + IGKG V A + +G AVK + L + EV + +
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL--NPTSLQKLFREVRIMKIL 71
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H NI+K + ++V EY G + L KE + + + +A+
Sbjct: 72 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFRQIVSAVQ 128
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
Y H IVH D+ ++N+LLD + ++DFG + + F G+ YAAPE+
Sbjct: 129 YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPPYAAPEL 184
Query: 937 AHMMRAT-EKYDVHSFGVLALEVIKGNHPRD 966
+ + DV S GV+ ++ G+ P D
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 70
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--- 181
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 65/287 (22%), Positives = 119/287 (41%), Gaps = 48/287 (16%)
Query: 767 IGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQD--EFLNEVLALTEI 816
+G+G G V AE + AVK +L D+ ++D + ++E+ + I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK-----MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 817 -RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------------DDAAAKEFGWN 862
+H+NII G C+ +++ Y +G+L L+ + ++ +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 863 QRMNVIKGVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN--PHS 919
++ +A + YL C +H D++++NVL+ + ++DFG+A+ +N +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNM 978
T + APE T + DV SFGVL E+ G P Y +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKL 271
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ E HR+ P+ + M + + C P RPT K++
Sbjct: 272 LKE-----GHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVKK + + D F E+ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD---FEREIEILKSLQHDNI 76
Query: 822 IKFHGFCSNA--QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVAN 873
+K+ G C +A ++ ++ E+L GSL L+ +R++ IK +
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH--------KERIDHIKLLQYTSQICK 128
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGT 928
+ YL +H D++++N+L+++E+ + DFG+ K L P +
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 184
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
F Y APE + + DV SFGV+ E+
Sbjct: 185 FWY-APESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 61
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 119 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 172
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 31 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 88
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 146 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 199
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 200 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 166/406 (40%), Gaps = 36/406 (8%)
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
+++L+L+ NQLR + S L L + N++ P + L L L+L N+L
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342
+F+ ++LT + L +NS+ + L L L N L + L +
Sbjct: 87 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN 146
Query: 343 LRTLYLYDNGFYGLVPNEIGYL--KSLSKLELCRNHLSGVIP---HSIGNLTKLVLVN-- 395
L+ L L +N L E+ SL KLEL N + P H+IG L L L N
Sbjct: 147 LQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQ 206
Query: 396 ----MCENHLFGLIPKSFRNLT-SLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL- 449
+ E L S RNL+ S +L N F + NLT LDLS NNL
Sbjct: 207 LGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL-----KWTNLTMLDLSYNNLN 261
Query: 450 -YGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV----- 503
G SF W P+L F NNI + ++ L+L + I +
Sbjct: 262 VVGNDSFAW--LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 319
Query: 504 ----QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDL-----SANKLSSSIPKSMG 554
F+ L L L + N + G F L L+YL L S L++ S+
Sbjct: 320 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLA 379
Query: 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ 600
+ S LH LNL+ N+ + F L HL LDL N + E+ Q
Sbjct: 380 H-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 112/297 (37%), Gaps = 49/297 (16%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
+++ L L N L L+ L++ N +S + P L L ++N+ N
Sbjct: 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
L L K+F T+L L N++ F NL LDLS N L
Sbjct: 85 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS--------- 135
Query: 461 PKLGT--------FNASMNNIYGSIPPE---IGDSSKLQVLDLSSN----------HIVG 499
KLGT NN ++ E I +S L+ L+LSSN H +G
Sbjct: 136 TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIG 195
Query: 500 KI-----------PVQFEKL------FSLNKLILNLNQLSGGVPLEFGSL--TELQYLDL 540
++ P EKL S+ L L+ +QLS F L T L LDL
Sbjct: 196 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255
Query: 541 SANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEI 597
S N L+ S L +L Y L N H L ++ L+L +F + I
Sbjct: 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 312
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 101/245 (41%), Gaps = 17/245 (6%)
Query: 363 YLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN--HLFGLIPKSFRNL--TSLERL 418
+LK L L + N + G+ + L L +++ + L L ++F +L + L L
Sbjct: 327 WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHIL 386
Query: 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEIS-FNWRNFPKLGTFNASMNNIYGSI 477
+N + +AF +L LDL N + E++ WR + S N
Sbjct: 387 NLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLT 446
Query: 478 PPEIGDSSKLQVLDLSSNHI--VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
LQ L L + V P F+ L +L L L+ N ++ L +L
Sbjct: 447 RNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL 506
Query: 536 QYLDLSANKLSSSIPKS--------MGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSEL 586
+ LDL N L+ + + LS LH LNL +N F+ +IP E F+ L L +
Sbjct: 507 EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKII 565
Query: 587 DLSHN 591
DL N
Sbjct: 566 DLGLN 570
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 70
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 181
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 28 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 85
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 143 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 196
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
+IV EY+D +L I+ + + + VI AL++ H + I+H D+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 895 NVLLDSEHEAHVSDFGIAKFLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L+ + + V DFGIA+ + ++ A GT Y +PE A + DV+S
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAIL- 1010
G + EV+ G P T S S + ++ P P + L + ++ +L
Sbjct: 206 GCVLYEVLTGEPP----FTGDSPVSVAYQHVRED-----PIPPSARHEGLSADLDAVVLK 256
Query: 1011 CLVESPEAR 1019
L ++PE R
Sbjct: 257 ALAKNPENR 265
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 5 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 62
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 120 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 173
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 20 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKP--FQSIIHA 77
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 135 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 188
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 10 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 67
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 178
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 167/406 (41%), Gaps = 36/406 (8%)
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
+++L+L+ NQLR + S L L + N++ P + L L L+L N+L
Sbjct: 37 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 96
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342
+F+ ++LT + L +NS+ + L L L N L + L +
Sbjct: 97 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN 156
Query: 343 LRTLYLYDNGFYGLVPNEIGYL--KSLSKLELCRNHLSGVIP---HSIGNLTKLVLVN-- 395
L+ L L +N L E+ SL KLEL N + P H+IG L L L N
Sbjct: 157 LQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQ 216
Query: 396 ----MCENHLFGLIPKSFRNLT-SLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL- 449
+ E L S RNL+ S +L N F + NLT LDLS NNL
Sbjct: 217 LGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL-----KWTNLTMLDLSYNNLN 271
Query: 450 -YGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV----- 503
G SF W P+L F NNI + ++ L+L + I +
Sbjct: 272 VVGNDSFAW--LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 329
Query: 504 ----QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN-----KLSSSIPKSMG 554
F+ L L L + N + G F L L+YL LS + L++ S+
Sbjct: 330 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLA 389
Query: 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ 600
+ S LH LNL+ N+ + F L HL LDL N + E+ Q
Sbjct: 390 H-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 434
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 112/297 (37%), Gaps = 49/297 (16%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
+++ L L N L L+ L++ N +S + P L L ++N+ N
Sbjct: 35 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 94
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
L L K+F T+L L N++ F NL LDLS N L
Sbjct: 95 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST-------- 146
Query: 461 PKLGT--------FNASMNNIYGSIPPE---IGDSSKLQVLDLSSN----------HIVG 499
KLGT NN ++ E I +S L+ L+LSSN H +G
Sbjct: 147 -KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIG 205
Query: 500 KI-----------PVQFEKL------FSLNKLILNLNQLSGGVPLEFGSL--TELQYLDL 540
++ P EKL S+ L L+ +QLS F L T L LDL
Sbjct: 206 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 265
Query: 541 SANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEI 597
S N L+ S L +L Y L N H L ++ L+L +F + I
Sbjct: 266 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 322
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 101/245 (41%), Gaps = 17/245 (6%)
Query: 363 YLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN--HLFGLIPKSFRNL--TSLERL 418
+LK L L + N + G+ + L L +++ + L L ++F +L + L L
Sbjct: 337 WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHIL 396
Query: 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEIS-FNWRNFPKLGTFNASMNNIYGSI 477
+N + +AF +L LDL N + E++ WR + S N
Sbjct: 397 NLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLT 456
Query: 478 PPEIGDSSKLQVLDLSSNHI--VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
LQ L L + V P F+ L +L L L+ N ++ L +L
Sbjct: 457 RNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL 516
Query: 536 QYLDLSANKLSSSIPKS--------MGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSEL 586
+ LDL N L+ + + LS LH LNL +N F+ +IP E F+ L L +
Sbjct: 517 EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKII 575
Query: 587 DLSHN 591
DL N
Sbjct: 576 DLGLN 580
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 5 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 62
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 120 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 173
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 20 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 77
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 135 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 188
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 20 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 77
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 135 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 188
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 14 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 71
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 182
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 27 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 84
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 142 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 195
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 16/230 (6%)
Query: 743 LNFNGKFLYEEIIKAI--DDFGEKYC-IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDE 799
L F YE + + + +DF E +G G G VYKA+ + A K +E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 800 MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEF 859
+ D ++ E+ L H NI+K + +I+ E+ G++ ++ + +
Sbjct: 78 LED---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPL 132
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+Q V K +AL+YLH + I+H D+ + N+L + + ++DFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATE-----KYDVHSFGVLALEVIKGNHP 964
F GT + APE+ + + K DV S G+ +E+ + P
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 72
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ H+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HT 182
Query: 920 SN-WTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
++ T + T Y APEI + M + D+ S G + E++ G
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 10 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 67
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 178
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 70
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 181
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 7 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 64
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 65 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 121
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 122 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 175
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 176 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 19 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 76
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 134 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 187
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 72
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 183
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 166/406 (40%), Gaps = 36/406 (8%)
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
+++L+L+ NQLR + S L L + N++ P + L L L+L N+L
Sbjct: 32 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 91
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342
+F+ ++LT + L +NS+ + L L L N L + L +
Sbjct: 92 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN 151
Query: 343 LRTLYLYDNGFYGLVPNEIGYL--KSLSKLELCRNHLSGVIP---HSIGNLTKLVLVN-- 395
L+ L L +N L E+ SL KLEL N + P H+IG L L L N
Sbjct: 152 LQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQ 211
Query: 396 ----MCENHLFGLIPKSFRNLT-SLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL- 449
+ E L S RNL+ S +L N F + NLT LDLS NNL
Sbjct: 212 LGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL-----KWTNLTMLDLSYNNLN 266
Query: 450 -YGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV----- 503
G SF W P+L F NNI + ++ L+L + I +
Sbjct: 267 VVGNDSFAW--LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 324
Query: 504 ----QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDL-----SANKLSSSIPKSMG 554
F+ L L L + N + G F L L+YL L S L++ S+
Sbjct: 325 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLA 384
Query: 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ 600
+ S LH LNL+ N+ + F L HL LDL N + E+ Q
Sbjct: 385 H-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 429
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 112/297 (37%), Gaps = 49/297 (16%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
+++ L L N L L+ L++ N +S + P L L ++N+ N
Sbjct: 30 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 89
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNF 460
L L K+F T+L L N++ F NL LDLS N L
Sbjct: 90 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS--------- 140
Query: 461 PKLGT--------FNASMNNIYGSIPPE---IGDSSKLQVLDLSSN----------HIVG 499
KLGT NN ++ E I +S L+ L+LSSN H +G
Sbjct: 141 TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIG 200
Query: 500 KI-----------PVQFEKL------FSLNKLILNLNQLSGGVPLEFGSL--TELQYLDL 540
++ P EKL S+ L L+ +QLS F L T L LDL
Sbjct: 201 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 260
Query: 541 SANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEI 597
S N L+ S L +L Y L N H L ++ L+L +F + I
Sbjct: 261 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 317
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 101/245 (41%), Gaps = 17/245 (6%)
Query: 363 YLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN--HLFGLIPKSFRNL--TSLERL 418
+LK L L + N + G+ + L L +++ + L L ++F +L + L L
Sbjct: 332 WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHIL 391
Query: 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEIS-FNWRNFPKLGTFNASMNNIYGSI 477
+N + +AF +L LDL N + E++ WR + S N
Sbjct: 392 NLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLT 451
Query: 478 PPEIGDSSKLQVLDLSSNHI--VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
LQ L L + V P F+ L +L L L+ N ++ L +L
Sbjct: 452 RNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL 511
Query: 536 QYLDLSANKLSSSIPKS--------MGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSEL 586
+ LDL N L+ + + LS LH LNL +N F+ +IP E F+ L L +
Sbjct: 512 EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKII 570
Query: 587 DLSHN 591
DL N
Sbjct: 571 DLGLN 575
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 72
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ H+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HT 182
Query: 920 SN-WTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
++ T + T Y APEI + M + D+ S G + E++ G
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
++E EV L EIRH NII H N ++ E + G L L + + E +
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---D 108
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPH 918
+ +K + + + YLH I H D+ +N++L ++ + DFGIA +
Sbjct: 109 EATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165
Query: 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978
+ F GT + APEI + + D+ S GV+ ++ G P T + +N
Sbjct: 166 NEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF-LGETKQETLTN- 222
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
I+ +N + D + + ++ + + LV+ P+ R T+ +
Sbjct: 223 ISAVNYDFDEEYFSNTSELAKDFIRRL------LVKDPKRRMTIAQ 262
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 10 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 67
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 178
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
Length = 576
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
+ L LH + IV+ D+ +N+LLD +SD G+A + P GT G
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVG 350
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP--RDYVSTNFSSFSNMITEINQNLDH 988
Y APE+ R T D + G L E+I G P + ++ E+ +
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410
Query: 989 RLPTPSRDVMDKLM 1002
R +R + +L+
Sbjct: 411 RFSPQARSLCSQLL 424
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 72
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ H+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HT 182
Query: 920 SN-WTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
++ T + T Y APEI + M + D+ S G + E++ G
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 166/402 (41%), Gaps = 28/402 (6%)
Query: 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
+++L+L+ NQLR P + S L IL NS+ P + L L L+L N+L
Sbjct: 27 ITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELS 86
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342
+F ++LT + L +NS+ N + L +L L N L + L +
Sbjct: 87 QISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLEN 146
Query: 343 LRTLYLYDNGFYGLVPNEIGYL--KSLSKLELCRNHLSGVIP---HSIGNLTKLVLVNMC 397
L+ L L N L E+ +L SL KL+L N L P +IG L L+L N
Sbjct: 147 LQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQ 206
Query: 398 EN-HLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFG--DHPNLTFLDLSQNNLY--GE 452
N HL + N TS++ L N L F NLT LDLS NNL+ G
Sbjct: 207 LNPHLTEKLCWELSN-TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGN 265
Query: 453 ISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV--------- 503
SF++ P L + NNI P S L+ L L + +
Sbjct: 266 GSFSY--LPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDF 323
Query: 504 QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSA-----NKLSSSIPKSMGNLSK 558
F+ L L L ++ N + F L L+YL LS L++ S+ + S
Sbjct: 324 SFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAH-SP 382
Query: 559 LHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ 600
L LNL+ N + F L L LDL N ++ ++ Q
Sbjct: 383 LLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQ 424
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 127/527 (24%), Positives = 202/527 (38%), Gaps = 86/527 (16%)
Query: 175 INVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSI----PNVMGNLNSLSILDLSQ 230
I VL L HN R+PP+ F SI P + L L +L+L
Sbjct: 27 ITVLNLTHNQLR-RLPPT---NFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQH 82
Query: 231 NQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL--------- 281
N+L + +NL L L NS+ + N K+L +LDLS N L
Sbjct: 83 NELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGV 142
Query: 282 -----------------FGSIPLSFSNLSSLTLMSLFNNSLSGSIP---PTQGNLEALSE 321
S L F SSL + L +N L P T G L AL
Sbjct: 143 QLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLL 202
Query: 322 LGLYIN-QLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLK--SLSKLELCRNHLS 378
+N L + + N +S++ L L +N + LK +L++L+L N+L
Sbjct: 203 NNAQLNPHLTEKLCWELSN-TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLH 261
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPN 438
V S L L +++ N++ L P+SF L++L L + F K + HPN
Sbjct: 262 DVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKR--AFTKQSVSLASHPN 319
Query: 439 LTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIV 498
+ + SF W + L N NNI + SN
Sbjct: 320 I-----------DDFSFQWLKY--LEYLNMDDNNIPST----------------KSNTFT 350
Query: 499 GKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSK 558
G + +++ SL+K +L L+ + + L L+L+ N +S + L +
Sbjct: 351 GLVSLKY---LSLSKTFTSLQTLTNETFVSLAH-SPLLTLNLTKNHISKIANGTFSWLGQ 406
Query: 559 LHYLNLSNNQFNHKIP-TEFEKLIHLSELDLSHN-FLQGEIPP-QICXXXXXXXXXXXXX 615
L L+L N+ K+ E+ L ++ E+ LS+N +LQ +
Sbjct: 407 LRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVAL 466
Query: 616 XXFDLIPGCFEEMRSLSRIDIAYNELQGPIPNSTAFKDGLMEGNKGL 662
D+ P F +R+L+ +D++ N N + L+EG + L
Sbjct: 467 KNVDISPSPFRPLRNLTILDLSNN-------NIANINEDLLEGLENL 506
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANK 544
S + VL+L+ N + P F + L L N +S P L L+ L+L N+
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNE 84
Query: 545 LSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE-FEKLIHLSELDLSHN 591
LS ++ + L L+L +N HKI + F+ +L +LDLSHN
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSI-HKIKSNPFKNQKNLIKLDLSHN 131
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 22/205 (10%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V++ + +G AVKK ++ E E++A + I+ +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---------ELVACAGLSSPRIVPLY 132
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G I E L+ GSL ++K E ++ + + L YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 186
Query: 886 IVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFAGTF-----GYAAPEIAHM 939
I+HGD+ + NVLL S+ A + DFG A L P + G + + APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 940 MRATEKYDVHSFGVLALEVIKGNHP 964
K D+ S + L ++ G HP
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 22/205 (10%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V++ + +G AVKK ++ E E++A + I+ +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---------ELVACAGLSSPRIVPLY 130
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G I E L+ GSL ++K E ++ + + L YLH
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 184
Query: 886 IVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFAGTF-----GYAAPEIAHM 939
I+HGD+ + NVLL S+ A + DFG A L P + G + + APE+
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 940 MRATEKYDVHSFGVLALEVIKGNHP 964
K D+ S + L ++ G HP
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Query: 871 VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG 930
+ L LH + IV+ D+ +N+LLD +SD G+A + P GT G
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVG 350
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP--RDYVSTNFSSFSNMITEINQNLDH 988
Y APE+ R T D + G L E+I G P + ++ E+ +
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410
Query: 989 RLPTPSRDVMDKLM 1002
R +R + +L+
Sbjct: 411 RFSPQARSLCSQLL 424
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEM----------- 800
+E K I+D+ + +G+ + E +A+KK+ LL +
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 801 --ADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858
+ D+F NE+ +T+I++ + G +N +I+ EY++ S ILK D
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS---ILKFDEYFFV 139
Query: 859 FGWNQR--------MNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910
N +IK V N+ SY+H++ I H D+ N+L+D +SDFG
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFG 197
Query: 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE--KYDVHSFGV 953
++++ + GT+ + PE + K D+ S G+
Sbjct: 198 ESEYMVDKKIKGS--RGTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYXQRTLREIKILL 80
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D +++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKSQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+ + +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V A +G A+K N ++L Q E+ L +RH +IIK +
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHIIKLY 70
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +V EY I++ D +++ + + + +A+ Y H
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 123
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRATE 944
IVH D+ +N+LLD ++DFG++ + + T+ G+ YAAPE I+ + A
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVISGKLYAGP 182
Query: 945 KYDVHSFGVL 954
+ DV S GV+
Sbjct: 183 EVDVWSCGVI 192
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 761 FGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
F + +G G +VYK +G+ A+K+ L E + E+ + E++H
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK---LDSEEGTPSTAIREISLMKELKHE 63
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR---MNVIK----GVA 872
NI++ + +V E++D LK ++ G R +N++K +
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
L++ H + I+H D+ +N+L++ + + DFG+A+ + +++ T Y
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR 175
Query: 933 APEIAHMMRA-TEKYDVHSFGVLALEVIKGN 962
AP++ R + D+ S G + E+I G
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 14 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 71
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 182
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V A +G A+K N ++L Q E+ L +RH +IIK +
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHIIKLY 74
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +V EY I++ D +++ + + + +A+ Y H
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 127
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRATE 944
IVH D+ +N+LLD ++DFG++ + + T+ G+ YAAPE I+ + A
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVISGKLYAGP 186
Query: 945 KYDVHSFGVL 954
+ DV S GV+
Sbjct: 187 EVDVWSCGVI 196
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V A +G A+K N ++L Q E+ L +RH +IIK +
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHIIKLY 80
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +V EY I++ D +++ + + + +A+ Y H
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 133
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRATE 944
IVH D+ +N+LLD ++DFG++ + + T+ G+ YAAPE I+ + A
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVISGKLYAGP 192
Query: 945 KYDVHSFGVL 954
+ DV S GV+
Sbjct: 193 EVDVWSCGVI 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 751 YEEIIKAI--DDFGEKYCIGK-GRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFL 807
YE + + + +DF E IG+ G G VYKA+ + A K +E+ D ++
Sbjct: 1 YEHVTRDLNPEDFWE--IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YM 55
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E+ L H NI+K + +I+ E+ G++ ++ + + +Q V
Sbjct: 56 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVV 113
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI-AKFLNPHSSNWTAFA 926
K +AL+YLH + I+H D+ + N+L + + ++DFG+ AK +F
Sbjct: 114 CKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI 170
Query: 927 GTFGYAAPEIAHMMRATE-----KYDVHSFGVLALEVIKGNHP 964
GT + APE+ + + K DV S G+ +E+ + P
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 76
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V A +G A+K N ++L Q E+ L +RH +IIK +
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDM-QGRIEREISYLRLLRHPHIIKLY 79
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +V EY I++ D +++ + + + +A+ Y H
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 132
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRATE 944
IVH D+ +N+LLD ++DFG++ + + T+ G+ YAAPE I+ + A
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVISGKLYAGP 191
Query: 945 KYDVHSFGVL 954
+ DV S GV+
Sbjct: 192 EVDVWSCGVI 201
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 55/262 (20%)
Query: 789 KKFNSQLLFDEMADQD---EFLNEVLALTEIRH-RNIIKFHGFCSNAQHSFIVSEYLDRG 844
+++ ++ L QD E L+E+ L + +I H N ++ EY G
Sbjct: 55 QEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114
Query: 845 SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-- 902
+ ++ + A + N + +IK + + YLH + IVH D+ +N+LL S +
Sbjct: 115 EIFSLCLPELA-EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPL 170
Query: 903 -EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG 961
+ + DFG+++ + H+ GT Y APEI + T D+ + G++A ++
Sbjct: 171 GDIKIVDFGMSRKIG-HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229
Query: 962 NHP-----------------RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSI 1004
P DY FSS S + T+ Q+L
Sbjct: 230 TSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSL------------------ 271
Query: 1005 MEVAILCLVESPEARPTMKKVC 1026
LV++PE RPT ++C
Sbjct: 272 -------LVKNPEKRPT-AEIC 285
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + D+G+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 439 LTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHI 497
LT+L+L N L + + + +LGT + NN S+P + D ++L L L N +
Sbjct: 61 LTWLNLDYNQLQTLSAGVFDDLTELGTLGLA-NNQLASLPLGVFDHLTQLDKLYLGGNQL 119
Query: 498 VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLS 557
F++L L +L LN NQL F LT LQ L LS N+L S + L
Sbjct: 120 KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLG 179
Query: 558 KLHYLNLSNNQFN 570
KL + L NQF+
Sbjct: 180 KLQTITLFGNQFD 192
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 63/150 (42%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
LDL L +R KL N N + D ++L L L++N +
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 502 PVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHY 561
F+ L L+KL L NQL F LT+L+ L L+ N+L S + L+ L
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQT 159
Query: 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L+LS NQ F++L L + L N
Sbjct: 160 LSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 77/177 (43%), Gaps = 36/177 (20%)
Query: 469 SMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQL---SGGV 525
S++++ IP D+ KL DL S + F L L L L+ NQL S GV
Sbjct: 25 SLDSVPSGIP---ADTEKL---DLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78
Query: 526 PLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSE 585
F LTEL L L+ N+L+S +L++L L L NQ F++L L E
Sbjct: 79 ---FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKE 135
Query: 586 LDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRIDIAYNELQ 642
L L+ N LQ IP G F+++ +L + ++ N+LQ
Sbjct: 136 LRLNTNQLQ-SIP-----------------------AGAFDKLTNLQTLSLSTNQLQ 168
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLAN-LSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
V +L L L L+ NQL S+P + + L+ L LYL N L V L L EL
Sbjct: 78 VFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136
Query: 275 DLSENQLFGSIPL-SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD 330
L+ NQL SIP +F L++L +SL N L L L + L+ NQ D
Sbjct: 137 RLNTNQL-QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 5/159 (3%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332
+LDL L +F L+ LT ++L N L +L L LGL NQL +
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASL 98
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+L+ L LYL N L L L +L L N L + + LT L
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE 431
+++ N L + +F L L+ + LFG ++
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTI-----TLFGNQFD 192
Score = 38.9 bits (89), Expect = 0.016, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 63/170 (37%), Gaps = 28/170 (16%)
Query: 90 GTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLT 149
T D +F L +LNL N L +L++L L L NNQL+ + HLT
Sbjct: 48 ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLT 107
Query: 150 CLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXX 208
L LY N L S+P + +L+ + L L N
Sbjct: 108 QLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ---------------------- 144
Query: 209 XFGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257
SIP L +L L LS NQL+ + L L + L+ N
Sbjct: 145 ---SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 37.4 bits (85), Expect = 0.041, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 61/154 (39%), Gaps = 2/154 (1%)
Query: 369 KLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGK 428
KL+L L+ + + LTKL +N+ N L L F +LT L L N L
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASL 98
Query: 429 VYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKL 487
F L L L N L S + KL + N + SIP D + L
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNL 157
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQL 521
Q L LS+N + F++L L + L NQ
Sbjct: 158 QTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 33.1 bits (74), Expect = 0.86, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 210 FGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLAN-LSNLGILYLYKNSLFGFIPSVIGN 267
S+P V +L L L L NQL+ S+P + + L+ L L L N L
Sbjct: 95 LASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK 153
Query: 268 LKSLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNNSLSGS 308
L +L L LS NQL S+P +F L L ++LF N S
Sbjct: 154 LTNLQTLSLSTNQL-QSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 30.0 bits (66), Expect = 6.9, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 3/100 (3%)
Query: 89 NGTFQDFSFSSFPHLMYLN---LSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEI 145
N F HL L+ L N L L+KL+ L L NQL +
Sbjct: 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAF 151
Query: 146 GHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNF 185
LT L+ L N L +L + +TL N F
Sbjct: 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 439 LTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHI 497
LT+L+L N L + + + +LGT + NN S+P + D ++L L L N +
Sbjct: 61 LTWLNLDYNQLQTLSAGVFDDLTELGTLGLA-NNQLASLPLGVFDHLTQLDKLYLGGNQL 119
Query: 498 VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLS 557
F++L L +L LN NQL F LT LQ L LS N+L S + L
Sbjct: 120 KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLG 179
Query: 558 KLHYLNLSNNQFN 570
KL + L NQF+
Sbjct: 180 KLQTITLFGNQFD 192
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 63/150 (42%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
LDL L +R KL N N + D ++L L L++N +
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 502 PVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHY 561
F+ L L+KL L NQL F LT+L+ L L+ N+L S + L+ L
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQT 159
Query: 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L+LS NQ F++L L + L N
Sbjct: 160 LSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 77/177 (43%), Gaps = 36/177 (20%)
Query: 469 SMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQL---SGGV 525
S++++ IP D+ KL DL S + F L L L L+ NQL S GV
Sbjct: 25 SLDSVPSGIP---ADTEKL---DLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78
Query: 526 PLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSE 585
F LTEL L L+ N+L+S +L++L L L NQ F++L L E
Sbjct: 79 ---FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKE 135
Query: 586 LDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRIDIAYNELQ 642
L L+ N LQ IP G F+++ +L + ++ N+LQ
Sbjct: 136 LRLNTNQLQ-SIP-----------------------AGAFDKLTNLQTLSLSTNQLQ 168
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLAN-LSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
V +L L L L+ NQL S+P + + L+ L LYL N L V L L EL
Sbjct: 78 VFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136
Query: 275 DLSENQLFGSIPL-SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L+ NQL SIP +F L++L +SL N L L L + L+ NQ D
Sbjct: 137 RLNTNQL-QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD--- 192
Query: 334 PPSIGNLSSLRTLYL 348
S TLYL
Sbjct: 193 ------CSRCETLYL 201
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 5/159 (3%)
Query: 273 ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332
+LDL L +F L+ LT ++L N L +L L LGL NQL +
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASL 98
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+L+ L LYL N L L L +L L N L + + LT L
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE 431
+++ N L + +F L L+ + LFG ++
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTI-----TLFGNQFD 192
Score = 38.9 bits (89), Expect = 0.016, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 63/170 (37%), Gaps = 28/170 (16%)
Query: 90 GTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLT 149
T D +F L +LNL N L +L++L L L NNQL+ + HLT
Sbjct: 48 ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLT 107
Query: 150 CLRMLYFDVNHLHGSIPLEI-GKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXX 208
L LY N L S+P + +L+ + L L N
Sbjct: 108 QLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ---------------------- 144
Query: 209 XFGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257
SIP L +L L LS NQL+ + L L + L+ N
Sbjct: 145 ---SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 37.4 bits (85), Expect = 0.042, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 61/154 (39%), Gaps = 2/154 (1%)
Query: 369 KLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGK 428
KL+L L+ + + LTKL +N+ N L L F +LT L L N L
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASL 98
Query: 429 VYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKL 487
F L L L N L S + KL + N + SIP D + L
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNL 157
Query: 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQL 521
Q L LS+N + F++L L + L NQ
Sbjct: 158 QTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 30.0 bits (66), Expect = 6.9, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 3/100 (3%)
Query: 89 NGTFQDFSFSSFPHLMYLN---LSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEI 145
N F HL L+ L N L L+KL+ L L NQL +
Sbjct: 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAF 151
Query: 146 GHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNF 185
LT L+ L N L +L + +TL N F
Sbjct: 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 10/200 (5%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG Y+ ++ + +FA K +L + +++ E+ + + +++ FH
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL-KPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM-NVIKGVANALSYLHHDCLP 884
GF + ++V E R SL + K A E M I+GV YLH++
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV----QYLHNN--- 161
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
++H D+ N+ L+ + + + DFG+A + GT Y APE+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 945 KYDVHSFGVLALEVIKGNHP 964
+ D+ S G + ++ G P
Sbjct: 222 EVDIWSLGCILYTLLVGKPP 241
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 80
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSN--AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM 865
E+ L +RH+N+I+ N Q ++V EY G + D K F Q
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFPVCQAH 112
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925
+ + L YLH IVH DI N+LL + +S G+A+ L+P +++ T
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 926 A--GTFGYAAPEIAHMMRATE--KYDVHSFGVLALEVIKGNHP 964
G+ + PEIA+ + K D+ S GV + G +P
Sbjct: 170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 76
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 474 YGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE-FGSL 532
+ S+P G + Q+L L N I P F+ L +L +L L NQL G +P+ F SL
Sbjct: 31 HASVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSL 87
Query: 533 TELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592
T+L LDL N+L+ L L L + N+ ++P E+L HL+ L L N
Sbjct: 88 TQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ 146
Query: 593 LQGEIP 598
L+ IP
Sbjct: 147 LK-SIP 151
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 230 QNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS- 288
+++ S+P + +N ILYL+ N + P V +L +L EL L NQL G++P+
Sbjct: 27 RSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV 83
Query: 289 FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYL 348
F +L+ LT++ L N L+ L L EL + N+L +P I L+ L L L
Sbjct: 84 FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLAL 142
Query: 349 YDNGFYGLVPNEIGYLKSLSKLELCRN 375
N + L SL+ L N
Sbjct: 143 DQNQLKSIPHGAFDRLSSLTHAYLFGN 169
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 225 ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284
IL L NQ+ P +L NL LYL N L V +L L LDL NQL
Sbjct: 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVL 103
Query: 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLR 344
F L L + + N L+ +P L L+ L L NQL + + LSSL
Sbjct: 104 PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLT 162
Query: 345 TLYLYDN 351
YL+ N
Sbjct: 163 HAYLFGN 169
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 322 LGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVI 381
L L+ NQ+ + P +L +L+ LYL N L L L+ L+L N L+ V+
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-VL 103
Query: 382 PHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440
P ++ L L + MC N L L P+ LT L L +QN L + AF +LT
Sbjct: 104 PSAVFDRLVHLKELFMCCNKLTEL-PRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLT 162
Score = 36.6 bits (83), Expect = 0.078, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
++ + LYL+DN L P L +L +L L N L + +LT+L ++++ N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
L L F L L+ L F N ++ +LT L L QN L
Sbjct: 100 LTVLPSAVFDRLVHLKEL-FMCCNKLTELPRGIERLTHLTHLALDQNQL 147
Score = 36.2 bits (82), Expect = 0.10, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 114 YGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI-GKL 172
+ ++P I +++ L L +NQ++ + P L L+ LY N L G++P+ + L
Sbjct: 31 HASVPAGIPTNAQI--LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSL 87
Query: 173 SLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQ 232
+ + VL L N + +P ++ +P + L L+ L L QNQ
Sbjct: 88 TQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQ 146
Query: 233 LRGSIPF-SLANLSNLGILYLYKN 255
L+ SIP + LS+L YL+ N
Sbjct: 147 LK-SIPHGAFDRLSSLTHAYLFGN 169
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 97 FSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEI-GHLTCLRML 154
F S +L L L N L G +P + +L++L LDLG NQL+ V+P + L L+ L
Sbjct: 60 FDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKEL 117
Query: 155 YFDVNHLHGSIPLEIGKLSLINVLTLCHNNF 185
+ N L +P I +L+ + L L N
Sbjct: 118 FMCCNKL-TELPRGIERLTHLTHLALDQNQL 147
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 43/231 (18%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
DF E +G+G G V KA +A+KK L+EV+ L + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNH 61
Query: 819 RNIIKFHGF-------------CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM 865
+ +++++ FI EY + +L ++ + ++ ++
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR--DEYW 119
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH------- 918
+ + + ALSY+H I+H D+ N+ +D + DFG+AK N H
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK--NVHRSLDILK 174
Query: 919 ---------SSNWTAFAGTFGYAAPEIAH-MMRATEKYDVHSFGVLALEVI 959
S N T+ GT Y A E+ EK D++S G++ E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 78
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 79 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG Y+ ++ + +FA K +L + +++ E+ + + +++ FH
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL-KPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
GF + ++V E R SL + K A E + ++ + YLH++
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---PEARYFMRQTIQGVQYLHNN---R 162
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H D+ N+ L+ + + + DFG+A + GT Y APE+ + +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFE 222
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G + ++ G P
Sbjct: 223 VDIWSLGCILYTLLVGKPP 241
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 42/224 (18%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKK-FNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIK 823
+GKG G V+K+ + +G + AVKK F++ F D E++ LTE+ H NI+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDA---FQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 824 FHGF--CSNAQHSFIVSEYLDRGSLTTILKD--DAAAKEFGWNQRMNVIKGVANALSYLH 879
N + ++V +Y++ I + + K++ Q + VIK YLH
Sbjct: 74 LLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIK-------YLH 126
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK--------------FLNPHSSNW--- 922
L +H D+ N+LL++E V+DFG+++ +N ++ N+
Sbjct: 127 SGGL---LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 923 ----TAFAGTFGYAAPEI-AHMMRATEKYDVHSFGVLALEVIKG 961
T + T Y APEI + T+ D+ S G + E++ G
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 82
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
+ ++YL+ + VH D++++N ++ + + DFG+ + + G
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 18 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 73
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
+ ++YL+ + VH D++++N ++ + + DFG+ + + G
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 76
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 84
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 85 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 144
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 145 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 201
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 202 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 76
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 96
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 246
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 76
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 115/277 (41%), Gaps = 36/277 (12%)
Query: 767 IGKGRQGSVYKAELPSG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNII 822
IG+G G V KA + + A+K+ + D +F E+ L ++ H NII
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSL------TTILKDDAA-------AKEFGWNQRMNVIK 869
G C + + ++ EY G+L + +L+ D A A Q ++
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
VA + YL +H D++++N+L+ + A ++DFG+++ + T
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK-TMGRLPV 195
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ A E + T DV S+GVL E++ G P Y + + + +
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--YCGMTCAELYEKLPQ-----GY 248
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RL P + D++ +M C E P RP+ ++
Sbjct: 249 RLEKP-LNCDDEVYDLMR---QCWREKPYERPSFAQI 281
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 115/277 (41%), Gaps = 36/277 (12%)
Query: 767 IGKGRQGSVYKAELPSG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNII 822
IG+G G V KA + + A+K+ + D +F E+ L ++ H NII
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSL------TTILKDDAA-------AKEFGWNQRMNVIK 869
G C + + ++ EY G+L + +L+ D A A Q ++
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
VA + YL +H D++++N+L+ + A ++DFG+++ + T
Sbjct: 150 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK-TMGRLPV 205
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ A E + T DV S+GVL E++ G P Y + + + +
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--YCGMTCAELYEKLPQ-----GY 258
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RL P + D++ +M C E P RP+ ++
Sbjct: 259 RLEKP-LNCDDEVYDLMR---QCWREKPYERPSFAQI 291
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 80
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRG 140
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 3/231 (1%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
++ R L L++N + N +L+ L L+L RNH+ + + L L + + +N
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN-WRN 459
L + +F L+ L+ L N + AF P+L LDL + IS +
Sbjct: 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG 183
Query: 460 FPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLN 519
L N +M N+ P + KL LDLS NH+ P F+ L L KL + +
Sbjct: 184 LSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS 241
Query: 520 QLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
Q+ F +L L ++L+ N L+ L L ++L +N +N
Sbjct: 242 QIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 5/225 (2%)
Query: 225 ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284
+L+L +NQ++ S +L +L IL L +N + L +L L+L +N+L
Sbjct: 68 LLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTI 127
Query: 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN-LEALSELGL-YINQLDGVIPPSIGNLSS 342
+F LS L + L NN + SIP N + +L L L + +L + + LS+
Sbjct: 128 PNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSN 186
Query: 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLF 402
LR L L +PN +K L +L+L NHLS + P S L L + M ++ +
Sbjct: 187 LRYLNLAMCNLRE-IPNLTPLIK-LDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244
Query: 403 GLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQN 447
+ +F NL SL + NNL ++ F +L + L N
Sbjct: 245 VIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 7/212 (3%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
N +L L IL LS+N +R + L+NL L L+ N L L L EL
Sbjct: 82 NSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKEL 141
Query: 275 DLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSE---LGLYINQLDG 331
L N + +F+ + SL + L I ++G E LS L L + L
Sbjct: 142 WLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYI--SEGAFEGLSNLRYLNLAMCNLRE 199
Query: 332 VIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKL 391
+ P++ L L L L N + P L L KL + ++ + + ++ NL L
Sbjct: 200 I--PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257
Query: 392 VLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
V +N+ N+L L F L LER+ + N
Sbjct: 258 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 104/270 (38%), Gaps = 54/270 (20%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
+P IS + R L+L NQ+ + HL L +L NH+ +EIG
Sbjct: 58 VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT---IEIGA----- 107
Query: 177 VLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGS 236
F+G + NLN+L + D N+L
Sbjct: 108 --------FNG-----------------------------LANLNTLELFD---NRLTTI 127
Query: 237 IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSL 295
+ LS L L+L N + + SL LDL E + I +F LS+L
Sbjct: 128 PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL 187
Query: 296 TLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYG 355
++L +L P L L EL L N L + P S L L+ L++ +
Sbjct: 188 RYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245
Query: 356 LVPNEIGYLKSLSKLELCRNHLSGVIPHSI 385
+ N L+SL ++ L N+L+ ++PH +
Sbjct: 246 IERNAFDNLQSLVEINLAHNNLT-LLPHDL 274
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 74
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 224
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 78
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV + ++ SG+ AVKK + F +
Sbjct: 37 FYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRP--FQSIIHA 94
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I G + + E+ D +T ++ D ++
Sbjct: 95 KRTYRELRLLKHMKHENVI---GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKL 151
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 152 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 205
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M D+ S G + E++ G
Sbjct: 206 DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 81
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 82
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 83 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 142
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 143 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 73
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 74 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 133
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 134 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 80
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 4 FYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 61
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCAKL 118
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 119 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 172
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 88
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 203
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 24 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 79
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 140 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 194
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 195 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 75
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 190
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 78
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 139 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 193
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 194 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 81
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 196
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 81
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 196
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 82
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 197
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 10/200 (5%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG Y+ ++ + +FA K +L + +++ E+ + + +++ FH
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL-KPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM-NVIKGVANALSYLHHDCLP 884
GF + ++V E R SL + K A E M I+GV YLH++
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV----QYLHNN--- 161
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
++H D+ N+ L+ + + + DFG+A + GT Y APE+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 945 KYDVHSFGVLALEVIKGNHP 964
+ D+ S G + ++ G P
Sbjct: 222 EVDIWSLGCILYTLLVGKPP 241
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 74
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 224
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG Y+ ++ + +FA K +L + +++ E+ + + +++ FH
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL-KPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
GF + ++V E R SL + K A E + ++ + YLH++
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---PEARYFMRQTIQGVQYLHNN---R 146
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEK 945
++H D+ N+ L+ + + + DFG+A + GT Y APE+ + +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFE 206
Query: 946 YDVHSFGVLALEVIKGNHP 964
D+ S G + ++ G P
Sbjct: 207 VDIWSLGCILYTLLVGKPP 225
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 767 IGKGRQGSVYKAELPSGI------IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
IG+G G V++A P + + AVK + D AD F E + E + N
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD---FQREAALMAEFDNPN 111
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK------------DDAAAKE---------F 859
I+K G C+ + ++ EY+ G L L+ D + +
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+++ + + VA ++YL VH D++++N L+ ++DFG+++ N +S
Sbjct: 172 SCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR--NIYS 226
Query: 920 SNWTAFAGT----FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+++ G + PE R T + DV ++GV+ E+
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 78
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 88
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 203
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G V++ E +G FA K ++ +D++ E+ ++ +RH ++ H
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAK----FVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 220
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ ++ E++ G L + D+ + ++ + ++ V L ++H +
Sbjct: 221 DAFEDDNEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHENNY-- 276
Query: 886 IVHGDISSKNVLLDSEH--EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT 943
VH D+ +N++ ++ E + DFG+ L+P S GT +AAPE+A
Sbjct: 277 -VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAPEVAEGKPVG 334
Query: 944 EKYDVHSFGVLALEVIKGNHP 964
D+ S GVL+ ++ G P
Sbjct: 335 YYTDMWSVGVLSYILLSGLSP 355
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 31 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 88
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 146 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 202
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
+ A T Y APEI + M + D+ S G + E++ G
Sbjct: 203 XGYVA---TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A
Putative Auto-Inhibition State
Length = 340
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 30/277 (10%)
Query: 755 IKAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEV-LA 812
+KA DD +G+G G V K +PSG I AVK+ + + E Q L ++ ++
Sbjct: 48 VKA-DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE---QKRLLMDLDIS 103
Query: 813 LTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
+ + + F+G +I E +D T++ K + G +++ +A
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMD----TSLDKFYKQVIDKGQTIPEDILGKIA 159
Query: 873 ----NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
AL +LH ++H D+ NVL+++ + + DFGI+ +L S T AG
Sbjct: 160 VSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGC 216
Query: 929 FGYAAPEIAHMMRATEKY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ 984
Y APE + + Y D+ S G+ +E+ P D T F ++ E
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE--- 273
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
P+P ++ CL ++ + RPT
Sbjct: 274 ------PSPQLPADKFSAEFVDFTSQCLKKNSKERPT 304
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 809 EVLALTEIRHRNIIKFHGFCSN-AQHSF-IVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
E+ L + H +IIK+ G C + + S +V EY+ GSL +D G Q +
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL----RDYLPRHSIGLAQLLL 121
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF- 925
+ + ++YLH +H +++++NVLLD++ + DFG+AK + P +
Sbjct: 122 FAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVR 177
Query: 926 ----AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
+ F Y APE + DV SFGV E++
Sbjct: 178 EDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 28 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 85
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 143 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 196
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 55 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 110
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 171 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 225
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 226 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 61
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 119 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 172
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 27 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 84
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 142 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 195
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 49/282 (17%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVK QL Q +F E+ L + I
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVK----QLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 822 IKFHG--FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL- 878
+K+ G + Q +V EYL G L L+ A ++ + + + YL
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 131
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGTFGYAA 933
C VH D++++N+L++SE ++DFG+AK L P ++ + F Y A
Sbjct: 132 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWY-A 185
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD------ 987
PE + + DV SFGV+ E+ Y + S + + + D
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGSERDVPALSR 239
Query: 988 --------HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
RLP P + + E+ LC SP+ RP+
Sbjct: 240 LLELLEEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPS 277
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 16/212 (7%)
Query: 757 AIDDFGE-KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
A+ DF E + +G+G VY+ + +K + + + D+ E+ L
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQK-----GTQKPYALKVLKKTVDKKIVRTEIGVLLR 104
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ H NIIK +V E + G L + + E + +K + A+
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE---RDAADAVKQILEAV 161
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDS---EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
+YLH + IVH D+ +N+L + + ++DFG++K + H GT GY
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTPGYC 217
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APEI + D+ S G++ ++ G P
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 809 EVLALTEIRHRNIIKFHGFCSN-AQHSF-IVSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
E+ L + H +IIK+ G C + + S +V EY+ GSL +D G Q +
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL----RDYLPRHSIGLAQLLL 121
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF- 925
+ + ++YLH +H +++++NVLLD++ + DFG+AK + P +
Sbjct: 122 FAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVR 177
Query: 926 ----AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
+ F Y APE + DV SFGV E++
Sbjct: 178 EDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 22/205 (10%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G G V++ + +G AVKK ++ E E++A + I+ +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---------ELVACAGLSSPRIVPLY 116
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
G I E L+ GSL ++K E ++ + + L YLH
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 170
Query: 886 IVHGDISSKNVLLDSE-HEAHVSDFGIAKFLNPHSSNWTAFAGTF-----GYAAPEIAHM 939
I+HGD+ + NVLL S+ A + DFG A L P + G + + APE+
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 940 MRATEKYDVHSFGVLALEVIKGNHP 964
K D+ S + L ++ G HP
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 61
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ H+
Sbjct: 119 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HT 171
Query: 920 SNWTA-FAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
+ A F T Y APEI + M + D+ S G + E++ G
Sbjct: 172 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 767 IGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G G G V++ E +G FA K ++ +D++ E+ ++ +RH ++ H
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAK----FVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 114
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ ++ E++ G L + D+ + ++ + ++ V L ++H +
Sbjct: 115 DAFEDDNEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHENNY-- 170
Query: 886 IVHGDISSKNVLLDSEH--EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRAT 943
VH D+ +N++ ++ E + DFG+ L+P S GT +AAPE+A
Sbjct: 171 -VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAPEVAEGKPVG 228
Query: 944 EKYDVHSFGVLALEVIKGNHP 964
D+ S GVL+ ++ G P
Sbjct: 229 YYTDMWSVGVLSYILLSGLSP 249
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 18 FYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 75
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 76 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 132
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 133 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 186
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 187 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A++K + F+ L E+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISP---FEHQTYCQRTLREIKILL 80
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ H+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 920 SNWTA-FAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
+ A F T Y APEI + M + D+ S G + E++ G
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 110/278 (39%), Gaps = 47/278 (16%)
Query: 767 IGKGRQGSVYKAELPS--GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G+G GSV + L G V +L + +EFL+E + + H N+I+
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 825 HGFC-----SNAQHSFIVSEYLDRGSLTTIL---KDDAAAKEFGWNQRMNVIKGVANALS 876
G C ++ ++ G L T L + + K + + +A +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YL + +H D++++N +L + V+DFG++K + ++G + Y I
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKI---------YSGDY-YRQGRI 208
Query: 937 AHM------------MRATEKYDVHSFGVLALEV-IKGNHPRDYVSTNFSSFSNMITEIN 983
A M T K DV +FGV E+ +G P V N + ++
Sbjct: 209 AKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-NHEMYDYLLH--- 264
Query: 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
HRL P D +D+L IM C P RPT
Sbjct: 265 ---GHRLKQPE-DCLDELYEIMYS---CWRTDPLDRPT 295
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ H+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 920 SNWTA-FAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
+ A F T Y APEI + M + D+ S G + E++ G
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 805 EFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ- 863
+ L EV L + H NI+K + F + ++ ++V E G L D +N+
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF-----DEIIHRMKFNEV 136
Query: 864 -RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHS 919
+IK V + ++YLH IVH D+ +N+LL+S+ + + DFG++ +
Sbjct: 137 DAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQ 192
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
GT Y APE+ + EK DV S GV+ ++ G P
Sbjct: 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 49/282 (17%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVK QL Q +F E+ L + I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVK----QLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 822 IKFHG--FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL- 878
+K+ G + Q +V EYL G L L+ A ++ + + + YL
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 144
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGTFGYAA 933
C VH D++++N+L++SE ++DFG+AK L P ++ + F Y A
Sbjct: 145 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWY-A 198
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD------ 987
PE + + DV SFGV+ E+ Y + S + + + D
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGCERDVPALSR 252
Query: 988 --------HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
RLP P + + E+ LC SP+ RP+
Sbjct: 253 LLELLEEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPS 290
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 36/234 (15%)
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ 863
+ F ++++ H++++ +G C + +V E++ GSL T LK + W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA--------HVSDFGIAKFL 915
++ V K +A A+ +L + L +HG++ +KN+LL E + +SD GI+ +
Sbjct: 115 KLEVAKQLAAAMHFLEENTL---IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 916 NPHSSNWTAFAGTFGYAAPEI----AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
P + PE ++ AT+K+ SFG E+ G
Sbjct: 172 LPKD----ILQERIPWVPPECIENPKNLNLATDKW---SFGTTLWEICSGG------DKP 218
Query: 972 FSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S+ + H+LP P + L++ C+ P+ RP+ + +
Sbjct: 219 LSALDSQRKLQFYEDRHQLPAPKAAELANLINN------CMDYEPDHRPSFRAI 266
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Novel Bosutinib Isoform 1, Previously Thought To Be
Bosutinib
Length = 293
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 26/266 (9%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G G VYKA+ A K +E+ D ++ E+ L H I+K G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILATCDHPYIVKLLG 75
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKD-DAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +I+ E+ G++ I+ + D E Q V + + AL++LH
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE---PQIQVVCRQMLEALNFLHSK---R 129
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGI-AKFLNPHSSNWTAFAGTFGYAAPEIA--HMMRA 942
I+H D+ + NVL+ E + ++DFG+ AK L +F GT + APE+ M+
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKD 188
Query: 943 TE---KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
T K D+ S G+ +E+ + P ++ ++ +I ++ L TPS+ ++
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSDPPTLLTPSKWSVE 243
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKV 1025
+++A L ++PE RP+ ++
Sbjct: 244 -FRDFLKIA---LDKNPETRPSAAQL 265
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 26/266 (9%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
+G G G VYKA+ A K +E+ D ++ E+ L H I+K G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILATCDHPYIVKLLG 83
Query: 827 FCSNAQHSFIVSEYLDRGSLTTILKD-DAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ +I+ E+ G++ I+ + D E Q V + + AL++LH
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE---PQIQVVCRQMLEALNFLHSK---R 137
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGI-AKFLNPHSSNWTAFAGTFGYAAPEIA--HMMRA 942
I+H D+ + NVL+ E + ++DFG+ AK L +F GT + APE+ M+
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKD 196
Query: 943 TE---KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMD 999
T K D+ S G+ +E+ + P ++ ++ +I ++ L TPS+ ++
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSDPPTLLTPSKWSVE 251
Query: 1000 KLMSIMEVAILCLVESPEARPTMKKV 1025
+++A L ++PE RP+ ++
Sbjct: 252 -FRDFLKIA---LDKNPETRPSAAQL 273
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+GKG V + ++ +G +A N++ L D + E ++H NI++ H
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLH 76
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
S H +++ + + G L +D A + + + I+ + A+ + H
Sbjct: 77 DSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 130
Query: 886 IVHGDISSKNVLLDSE---HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+VH ++ +N+LL S+ ++DFG+A + W FAGT GY +PE+
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
+ D+ + GV+ ++ G P
Sbjct: 191 GKPVDLWACGVILYILLVGYPP 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 49/282 (17%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVK QL Q +F E+ L + I
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVK----QLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 822 IKFHG--FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL- 878
+K+ G + Q +V EYL G L L+ A ++ + + + YL
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 132
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGTFGYAA 933
C VH D++++N+L++SE ++DFG+AK L P ++ + F Y A
Sbjct: 133 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWY-A 186
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD------ 987
PE + + DV SFGV+ E+ Y + S + + + D
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGCERDVPALCR 240
Query: 988 --------HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
RLP P + + E+ LC SP+ RP+
Sbjct: 241 LLELLEEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPS 278
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + FG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 14 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 71
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 182
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 767 IGKGRQGSVYKAELPSGII-------FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR 819
+G+G G VY+ + G++ A+K N M ++ EFLNE + E
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCH 75
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK-------DDAAAKEFGWNQRMNVIKGVA 872
++++ G S Q + ++ E + RG L + L+ ++ ++ + + +A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---- 928
+ ++YL+ + VH D++++N + + + DFG+ + + + +++ G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLP 190
Query: 929 FGYAAPEIAHMMRATEKYDVHSFGVLALEV 958
+ +PE T DV SFGV+ E+
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 178/440 (40%), Gaps = 68/440 (15%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI--PSVIGNLKSLFELDL 276
NL +L ILDL +++ P + L +L L LY L + NLK+L LDL
Sbjct: 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDL 130
Query: 277 SENQLFGSIPL--SFSNLSSLTLMSLFNNSL----SGSIPPTQGNLEALSELGLYINQLD 330
S+NQ+ S+ L SF L+SL + +N + + P QG + LS L N L
Sbjct: 131 SKNQI-RSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQG--KTLSFFSLAANSLY 187
Query: 331 GVIPPSIGNLSS------LRTLYLYDNGFY----GLVPNEIGYLKSLSKL---------- 370
+ G + L L + NG+ G N I ++ S +
Sbjct: 188 SRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGF 247
Query: 371 ------ELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNN 424
+ +N +G+ S+ +L ++ +F L + F L L+ L N
Sbjct: 248 GFHNIKDPDQNTFAGLARSSVRHL------DLSHGFVFSLNSRVFETLKDLKVLNLAYNK 301
Query: 425 LFGKVYEAFGDHPNLTFLDLSQNNLYGEI-SFNWRNFPKLGTFNASMNNIYGSIPPEIGD 483
+ EAF NL L+LS N L GE+ S N+ PK+ + N+I
Sbjct: 302 INKIADEAFYGLDNLQVLNLSYN-LLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKF 360
Query: 484 SSKLQVLDLSSN-----HIVGKIPVQF---EKLFSLNK--LILNLNQLSGG------VPL 527
KLQ LDL N H + IP F KL +L K L NL LS +
Sbjct: 361 LEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILY 420
Query: 528 EFGSLTELQYLDLSANKLSS-SIPKSMGNLSKLHYLNLSNNQFNHKIPTE-----FEKLI 581
+ LQ L L+ N+ SS S ++ L L L N TE FE L
Sbjct: 421 FLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLS 480
Query: 582 HLSELDLSHNFLQGEIPPQI 601
HL L L+HN+L +PP +
Sbjct: 481 HLQVLYLNHNYL-NSLPPGV 499
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 198/500 (39%), Gaps = 70/500 (14%)
Query: 89 NGTFQDFSFSSFPHLMYLNLSCNVLYG-NIPPQISNLSKLRALDLGNNQLSGVIPQEIGH 147
+ +D F + L L+LS N + + P L+ L+++D +NQ+ V E+
Sbjct: 111 DAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170
Query: 148 LTCLRMLYFDV--NHLHGSIPLEIGKLS------LINVLTLCHNNFSGRIPPSLGXXXXX 199
L + +F + N L+ + ++ GK ++ +L + N ++ I +
Sbjct: 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISK 230
Query: 200 XXXXXXXXXXFGSIPNVMG-NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258
++MG +I D QN G S+ +L L +F
Sbjct: 231 SQAFSLILAH-----HIMGAGFGFHNIKDPDQNTFAGLARSSVRHLD------LSHGFVF 279
Query: 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA 318
V LK L L+L+ N++ +F L +L +++L N L L
Sbjct: 280 SLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPK 339
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
++ + L N + + + L L+TL L DN I ++ S+ + L N L
Sbjct: 340 VAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL-----TTIHFIPSIPDIFLSGNKLV 394
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGL-IPKSFRNLTSLERLRFNQNNLFGKVYEAFGDH- 436
+P NLT L+++ EN L L I + L+ L NQN + GD
Sbjct: 395 -TLPKI--NLTA-NLIHLSENRLENLDILYFLLRVPHLQILILNQN----RFSSCSGDQT 446
Query: 437 ----PNLTFLDLSQN--NLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVL 490
P+L L L +N L E W F L S LQVL
Sbjct: 447 PSENPSLEQLFLGENMLQLAWETELCWDVFEGL---------------------SHLQVL 485
Query: 491 DLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSL-TELQYLDLSANKLSSSI 549
L+ N++ P F L +L L LN N+L+ L L L+ LD+S N+L +
Sbjct: 486 YLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT---VLSHNDLPANLEILDISRNQLLAPN 542
Query: 550 PKSMGNLSKLHYLNLSNNQF 569
P +LS L++++N+F
Sbjct: 543 PDVFVSLS---VLDITHNKF 559
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 88/223 (39%), Gaps = 42/223 (18%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
DF K +G+G G V A P+G I A+KK FD+ L E+ L +H
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP---FDKPLFALRTLREIKILKHFKH 68
Query: 819 RNIIKFHGFC-----SNAQHSFIVSEY----LDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
NII N +I+ E L R T +L DD I
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI---------QYFIY 119
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP----------HS 919
A+ LH ++H D+ N+L++S + V DFG+A+ ++
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKY----DVHSFGVLALEV 958
S T + T Y APE+ M + KY DV S G + E+
Sbjct: 177 SGMTEYVATRWYRAPEV---MLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + D G+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + D G+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 346 LYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI 405
LYL N F LVP E+ K L+ ++L N +S + S N+T+L+ + + N L +
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94
Query: 406 PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
P++F L SL L + N++ AF D L+ L + N LY + + W
Sbjct: 95 PRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQW 146
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSI 309
LYL N F +P + N K L +DLS N++ SFSN++ L + L N L
Sbjct: 36 LYLDGNQ-FTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94
Query: 310 PPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFY 354
P T L++L L L+ N + V + +LS+L L + N Y
Sbjct: 95 PRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 472 NIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS 531
N + +P E+ + L ++DLS+N I F + L LIL+ N+L P F
Sbjct: 41 NQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDG 100
Query: 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNN 567
L L+ L L N +S + +LS L +L + N
Sbjct: 101 LKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 269 KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ 328
+ + EL L NQ F +P SN LTL+ L NN +S + N+ L L L N+
Sbjct: 31 RDVTELYLDGNQ-FTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89
Query: 329 LDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL 377
L + P + L SLR L L+ N + L +LS L + N L
Sbjct: 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%)
Query: 237 IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLT 296
+P L+N +L ++ L N + N+ L L LS N+L P +F L SL
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 297 LMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329
L+SL N +S +L ALS L + N L
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 36.2 bits (82), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 518 LNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEF 577
L L G+P + +TEL YLD + L +PK + N L ++LSNN+ + F
Sbjct: 22 LKVLPKGIPRD---VTEL-YLDGNQFTL---VPKELSNYKHLTLIDLSNNRISTLSNQSF 74
Query: 578 EKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIP-GCFEEMRSLSRIDI 636
+ L L LS+N L+ IPP+ ++P G F ++ +LS + I
Sbjct: 75 SNMTQLLTLILSYNRLRC-IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI 133
Query: 637 AYNEL 641
N L
Sbjct: 134 GANPL 138
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176
+P ++SN L +DL NN++S + Q ++T L L N L P L +
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 177 VLTLCHNNFS 186
+L+L N+ S
Sbjct: 106 LLSLHGNDIS 115
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 501 IPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLH 560
+P + L + L+ N++S F ++T+L L LS N+L P++ L L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 561 YLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
L+L N + F L LS L + N L
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 32/272 (11%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL 271
S P N S + ++ +L +P S+ N L L +NS+ +L+ L
Sbjct: 5 SCPAACSCSNQASRVICTRREL-AEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHL 61
Query: 272 FELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG--NLEALSELGLYINQL 329
L LS+N + +F+ L SL + LF+N L+ PTQ L L EL L N +
Sbjct: 62 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV--PTQAFEYLSKLRELWLRNNPI 119
Query: 330 DGVIPPSIGNLSSLRTL---------YLYDNGFYGLV---------------PNEIGYLK 365
+ + + + SLR L Y+ + F GLV PN + L
Sbjct: 120 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN-LTALV 178
Query: 366 SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425
L +LEL N L + P S LT L + + + + +F +L SLE L + NNL
Sbjct: 179 RLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Query: 426 FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
++ F L + L+ N + W
Sbjct: 239 MSLPHDLFTPLHRLERVHLNHNPWHCNCDVLW 270
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 5/239 (2%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P SI + R L L +N + + +L+ L L+L +N + + + L L
Sbjct: 29 VPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 86
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
+ + +N L + ++F L+ L L N + AF P+L LDL +
Sbjct: 87 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY 146
Query: 453 IS-FNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL 511
IS + L N M N+ P + +L+ L+LS N + P F+ L SL
Sbjct: 147 ISEAAFEGLVNLRYLNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 204
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
KL L Q++ F L L+ L+LS N L S L +L ++L++N ++
Sbjct: 205 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 263
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 26/203 (12%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
+F HL L LS N++ + L L L+L +N+L+ V Q +L+ LR L+
Sbjct: 54 TFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELW 113
Query: 156 FDVNHLHGSIP------------LEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXX 203
N + SIP L++G+L + ++ F G +
Sbjct: 114 LRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYIS--EAAFEGLV---------NLRYL 161
Query: 204 XXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPS 263
IPN+ L L L+LS N+L P S L++L L+L + +
Sbjct: 162 NLGMCNLKDIPNLTA-LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERN 220
Query: 264 VIGNLKSLFELDLSENQLFGSIP 286
+LKSL EL+LS N L S+P
Sbjct: 221 AFDDLKSLEELNLSHNNLM-SLP 242
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 36/277 (12%)
Query: 767 IGKGRQGSVYKAELPSG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNII 822
IG+G G V KA + + A+K+ + D +F E+ L ++ H NII
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSL------TTILKDDAA-------AKEFGWNQRMNVIK 869
G C + + ++ EY G+L + +L+ D A A Q ++
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
VA + YL +H +++++N+L+ + A ++DFG+++ + T
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKK-TMGRLPV 202
Query: 930 GYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ A E + T DV S+GVL E++ G P Y + + + +
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--YCGMTCAELYEKLPQ-----GY 255
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
RL P + D++ +M C E P RP+ ++
Sbjct: 256 RLEKP-LNCDDEVYDLMR---QCWREKPYERPSFAQI 288
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G +V++ +G +FA+K FN+ + Q + E L ++ H+NI+K
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIVKLF 73
Query: 826 GFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
+ +H ++ E+ GSL T+L++ + A ++ + V++ V +++L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 884 PPIVHGDISSKNVLL----DSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI--- 936
IVH +I N++ D + ++DFG A+ L + + GT Y P++
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED-DEQFVSLYGTEEYLHPDMYER 189
Query: 937 -----AHMMRATEKYDVHSFGVLALEVIKGNHP 964
H + D+ S GV G+ P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 68/306 (22%), Positives = 112/306 (36%), Gaps = 69/306 (22%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V KA AVK E+ D L+E L ++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD---LLSEFNVLKQVNHPH 87
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK---------------------DDAAAKEF 859
+IK +G CS ++ EY GSL L+ D +
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
++ ++ + YL L VH D++++N+L+ + +SDFG+++ +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSL---VHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 920 S-----------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDY 967
S W A F + T + DV SFGVL E++ G +P Y
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVTLGGNP--Y 253
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
N++ HR+ P + M +LM + C + P+ RP +
Sbjct: 254 PGIPPERLFNLL-----KTGHRMERPDNCSEEMYRLM------LQCWKQEPDKRPVFADI 302
Query: 1026 CNLLCK 1031
L K
Sbjct: 303 SKDLEK 308
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + A+KK + F+ L E+ L
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP---FEHQTYCQRTLREIQILL 96
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH N+I + + Y+ + + T L +++ + + +
Sbjct: 97 RFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRG 156
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+L+++ + + DFG+A+ +P H+ T T Y
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 246
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 47/285 (16%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+ R G VYK L A+K + E ++EF +E + ++H N
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPN 90
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG---------- 870
++ G + Q ++ Y G L L + + G +K
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 871 ---VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925
+A + YL HH +VH D++++NVL+ + +SD G+ F +++++
Sbjct: 151 VAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKL 203
Query: 926 AGT----FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM-IT 980
G + APE + + D+ S+GV+ EV Y + +SN +
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------YGLQPYCGYSNQDVV 257
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
E+ +N LP P D + + I C E P RP K +
Sbjct: 258 EMIRN-RQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 47/285 (16%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+ R G VYK L A+K + E ++EF +E + ++H N
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPN 73
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG---------- 870
++ G + Q ++ Y G L L + + G +K
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 871 ---VANALSYL--HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925
+A + YL HH +VH D++++NVL+ + +SD G+ F +++++
Sbjct: 134 VAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKL 186
Query: 926 AGT----FGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM-IT 980
G + APE + + D+ S+GV+ EV Y + +SN +
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------YGLQPYCGYSNQDVV 240
Query: 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
E+ +N LP P D + + I C E P RP K +
Sbjct: 241 EMIRN-RQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
+G+G +V++ +G +FA+K FN+ + Q + E L ++ H+NI+K
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIVKLF 73
Query: 826 GFC--SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL 883
+ +H ++ E+ GSL T+L++ + A ++ + V++ V +++L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 884 PPIVHGDISSKNVLL----DSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI--- 936
IVH +I N++ D + ++DFG A+ L + GT Y P++
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDMYER 189
Query: 937 -----AHMMRATEKYDVHSFGVLALEVIKGNHP 964
H + D+ S GV G+ P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G+ AVKK + F +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP--FQSIIHA 65
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + D G+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTD--- 176
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T + T Y APEI + M + D+ S G + E++ G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILL 96
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + YL + L + + + +
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T + T Y
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 246
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 36/234 (15%)
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ 863
+ F ++++ H++++ +G C + +V E++ GSL T LK + W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA--------HVSDFGIAKFL 915
++ V K +A A+ +L + L +HG++ +KN+LL E + +SD GI+ +
Sbjct: 115 KLEVAKQLAWAMHFLEENTL---IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 916 NPHSSNWTAFAGTFGYAAPEI----AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971
P + PE ++ AT+K+ SFG E+ G
Sbjct: 172 LPKD----ILQERIPWVPPECIENPKNLNLATDKW---SFGTTLWEICSGG------DKP 218
Query: 972 FSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
S+ + H+LP P + L++ C+ P+ RP+ + +
Sbjct: 219 LSALDSQRKLQFYEDRHQLPAPKAAELANLINN------CMDYEPDHRPSFRAI 266
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
++E EV L EIRH NII H N ++ E + G L L + + E +
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---D 129
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPH 918
+ +K + + + YLH I H D+ +N++L ++ + DFGIA +
Sbjct: 130 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ F GT + APEI + + D+ S GV+ ++ G P
Sbjct: 187 NEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ L +L+ L L+ NQL+ L+NL L L +N L V L +L L+
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
L+ NQL F L++LT + L N L L L +L LY NQL V
Sbjct: 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDG 199
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL 388
L+SL+ ++L+DN + P I YL E H SGV+ +S G++
Sbjct: 200 VFDRLTSLQYIWLHDNPWDCTCPG-IRYLS-----EWINKH-SGVVRNSAGSV 245
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNL 564
++L +L LIL NQL F LT L+ L L N+L S L+ L YLNL
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140
Query: 565 SNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIP-G 623
++NQ F+KL +L+ELDLS+N LQ +P + +P G
Sbjct: 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDG 199
Query: 624 CFEEMRSLSRI 634
F+ + SL I
Sbjct: 200 VFDRLTSLQYI 210
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 503 VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYL 562
V +L S++++I N + + +++ L ++YL L NKL ++ L+ L YL
Sbjct: 35 VTQNELNSIDQIIANNSDIKSVQGIQY--LPNVRYLALGGNKLHDI--SALKELTNLTYL 90
Query: 563 NLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIP 622
L+ NQ F+KL +L EL L N LQ +P + +P
Sbjct: 91 ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQSLP 149
Query: 623 -GCFEEMRSLSRIDIAYNELQ 642
G F+++ +L+ +D++YN+LQ
Sbjct: 150 KGVFDKLTNLTELDLSYNQLQ 170
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 11/200 (5%)
Query: 143 QEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXX 202
Q I +L +R L N LH L+ +L+ + L L N +P +
Sbjct: 57 QGIQYLPNVRYLALGGNKLHDISALK--ELTNLTYLILTGNQLQS-LPNGVFDKLTNLKE 113
Query: 203 XXXXXXXFGSIPN-VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261
S+P+ V L +L+ L+L+ NQL+ L+NL L L N L
Sbjct: 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173
Query: 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSE 321
V L L +L L +NQL F L+SL + L +N + P + LSE
Sbjct: 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSE 229
Query: 322 LGLYINQLDGVIPPSIGNLS 341
+IN+ GV+ S G+++
Sbjct: 230 ---WINKHSGVVRNSAGSVA 246
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 81/214 (37%), Gaps = 50/214 (23%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
I YL ++ L L N L + ++ LT L + + N L L F LT+L+ L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPE 480
+N L F NLT+L+L+ N L S+P
Sbjct: 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-------------------------SLPKG 151
Query: 481 IGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDL 540
+ F+KL +L +L L+ NQL F LT+L+ L L
Sbjct: 152 V-----------------------FDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRL 188
Query: 541 SANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP 574
N+L S L+ L Y+ L +N ++ P
Sbjct: 189 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Query: 412 LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMN 471
L S++++ N +++ K + PN+ +L L N L+ +IS + L T+
Sbjct: 40 LNSIDQIIANNSDI--KSVQGIQYLPNVRYLALGGNKLH-DISA-LKELTNL-TYLILTG 94
Query: 472 NIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFG 530
N S+P + D + L+ L L N + F+KL +L L L NQL F
Sbjct: 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD 154
Query: 531 SLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
LT L LDLS N+L S L++L L L NQ F++L L + L
Sbjct: 155 KLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD 214
Query: 591 N 591
N
Sbjct: 215 N 215
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV---IPHSIGNLTKLVL 393
I L ++R L L N + + + + L +L+ L L N L + + + NL +LVL
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 394 VNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
V EN L L F LT+L L N L F NLT LDLS N L
Sbjct: 117 V---ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 87/223 (39%), Gaps = 42/223 (18%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
DF K +G+G G V A P+G I A+KK FD+ L E+ L +H
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP---FDKPLFALRTLREIKILKHFKH 68
Query: 819 RNIIKFHGF-----CSNAQHSFIVSEY----LDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
NII N +I+ E L R T +L DD I
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI---------QYFIY 119
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP----------HS 919
A+ LH ++H D+ N+L++S + V DFG+A+ ++
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKY----DVHSFGVLALEV 958
S F T Y APE+ M + KY DV S G + E+
Sbjct: 177 SGMVEFVATRWYRAPEV---MLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 801 ADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL--TTILKDDAAAKE 858
++ L+EV L ++ H NI+K + F + ++ ++V E G L IL+ ++
Sbjct: 63 SNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-----QK 117
Query: 859 FGWNQRMNVIKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKF 914
F ++K V + +YLH H+ IVH D+ +N+LL+S+ + DFG++
Sbjct: 118 FSEVDAAVIMKQVLSGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAH 173
Query: 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
GT Y APE+ + EK DV S GV+ ++ G P
Sbjct: 174 FEV-GGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
++E EV L EIRH NII H N ++ E + G L L + + E +
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---D 115
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPH 918
+ +K + + + YLH I H D+ +N++L ++ + DFGIA +
Sbjct: 116 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ F GT + APEI + + D+ S GV+ ++ G P
Sbjct: 173 NEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 806 FLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL--TTILKDDAAAKEFGWNQ 863
L+EV L ++ H NI+K + F + ++ ++V E G L IL+ ++F
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-----QKFSEVD 105
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHSS 920
++K V + +YLH IVH D+ +N+LL+S+ + DFG++
Sbjct: 106 AAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GG 161
Query: 921 NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVL 954
GT Y APE+ + EK DV S GV+
Sbjct: 162 KMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVI 194
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLF-DEMADQDEFLNEVLALTEIR 817
DF +GKG G V +E + ++AVK ++ D+ + VLAL +
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-K 79
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ + H + V EY++ G L ++ KE + +A L +
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGLFF 136
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
L I++ D+ NV+LDSE ++DFG+ K F GT Y APEI
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII 193
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D +FGVL E++ G P
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 32/272 (11%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL 271
S P N S + ++ +L +P S+ N L L +NS+ +L+ L
Sbjct: 5 SCPAACSCSNQASRVICTRREL-AEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHL 61
Query: 272 FELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG--NLEALSELGLYINQL 329
L LS+N + +F+ L SL + LF+N L+ PTQ L L EL L N +
Sbjct: 62 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV--PTQAFEYLSKLRELWLRNNPI 119
Query: 330 DGVIPPSIGNLSSLRTL---------YLYDNGFYGLV---------------PNEIGYLK 365
+ + + + SLR L Y+ + F GLV PN + L
Sbjct: 120 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN-LTALV 178
Query: 366 SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425
L +LEL N L + P S LT L + + + + +F +L SLE L + NNL
Sbjct: 179 RLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Query: 426 FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
++ F L + L+ N + W
Sbjct: 239 MSLPHDLFTPLHRLERVHLNHNPWHCNCDVLW 270
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 5/239 (2%)
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
+P SI + R L L +N + + +L+ L L+L +N + + + L L
Sbjct: 29 VPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 86
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452
+ + +N L + ++F L+ L L N + AF P+L LDL +
Sbjct: 87 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY 146
Query: 453 IS-FNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSL 511
IS + L N M N+ P + +L+ L+LS N + P F+ L SL
Sbjct: 147 ISEAAFEGLVNLRYLNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPGSFQGLTSL 204
Query: 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
KL L Q++ F L L+ L+LS N L S L +L ++L++N ++
Sbjct: 205 RKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 263
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 26/203 (12%)
Query: 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLY 155
+F HL L LS N++ + L L L+L +N+L+ V Q +L+ LR L+
Sbjct: 54 TFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELW 113
Query: 156 FDVNHLHGSIP------------LEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXX 203
N + SIP L++G+L + ++ F G +
Sbjct: 114 LRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYIS--EAAFEGLV---------NLRYL 161
Query: 204 XXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPS 263
IPN+ L L L+LS N+L P S L++L L+L + +
Sbjct: 162 NLGMCNLKDIPNLTA-LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERN 220
Query: 264 VIGNLKSLFELDLSENQLFGSIP 286
+LKSL EL+LS N L S+P
Sbjct: 221 AFDDLKSLEELNLSHNNLM-SLP 242
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 67/306 (21%), Positives = 112/306 (36%), Gaps = 69/306 (22%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V KA AVK E+ D L+E L ++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD---LLSEFNVLKQVNHPH 87
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK---------------------DDAAAKEF 859
+IK +G CS ++ EY GSL L+ D +
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
++ ++ + YL +VH D++++N+L+ + +SDFG+++ +
Sbjct: 148 TMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 920 S-----------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDY 967
S W A F + T + DV SFGVL E++ G +P Y
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVTLGGNP--Y 253
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
N++ HR+ P + M +LM + C + P+ RP +
Sbjct: 254 PGIPPERLFNLL-----KTGHRMERPDNCSEEMYRLM------LQCWKQEPDKRPVFADI 302
Query: 1026 CNLLCK 1031
L K
Sbjct: 303 SKDLEK 308
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 67/306 (21%), Positives = 112/306 (36%), Gaps = 69/306 (22%)
Query: 767 IGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820
+G+G G V KA AVK E+ D L+E L ++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD---LLSEFNVLKQVNHPH 87
Query: 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILK---------------------DDAAAKEF 859
+IK +G CS ++ EY GSL L+ D +
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
++ ++ + YL +VH D++++N+L+ + +SDFG+++ +
Sbjct: 148 TMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 920 S-----------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDY 967
S W A F + T + DV SFGVL E++ G +P Y
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVTLGGNP--Y 253
Query: 968 VSTNFSSFSNMITEINQNLDHRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
N++ HR+ P + M +LM + C + P+ RP +
Sbjct: 254 PGIPPERLFNLL-----KTGHRMERPDNCSEEMYRLM------LQCWKQEPDKRPVFADI 302
Query: 1026 CNLLCK 1031
L K
Sbjct: 303 SKDLEK 308
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 748 KFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFL 807
K LYE+ + A D +G+G G V++ S + K + ++ + + DQ
Sbjct: 1 KELYEKYMIAED-------LGRGEFGIVHRCVETS----SKKTYMAKFVKVKGTDQVLVK 49
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E+ L RHRNI+ H + + ++ E++ L + + +A E + ++
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELVMIFEFIS--GLDIFERINTSAFELNEREIVSY 107
Query: 868 IKGVANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVS--DFGIAKFLNPHSSNWTA 924
+ V AL +LH H+ I H DI +N++ + + + +FG A+ L P N+
Sbjct: 108 VHQVCEALQFLHSHN----IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-GDNFRL 162
Query: 925 FAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
Y APE+ + D+ S G L ++ G +P
Sbjct: 163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G+V+KA+ + I A+K+ +L D+ L E+ L E++H+NI++ H
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV--RLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ + +V E+ D+ D+ + + + + L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TE 944
++H D+ +N+L++ E ++DFG+A+ ++A T Y P++ + +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 945 KYDVHSFGVLALEVIKGNHP 964
D+ S G + E+ P
Sbjct: 182 SIDMWSAGCIFAELANAARP 201
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L+ +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD------HERMSYL--LYQMLVG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S GV+ E+IKG ++ I + N+ ++ +L TPS +
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKGG--------VLFPGTDHIDQWNKVIE-QLGTPSPEF 248
Query: 998 MDKL 1001
M KL
Sbjct: 249 MKKL 252
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELPSG----IIFAVKKFNSQLLFDEMADQDEFLNEVLA 812
I++F +G G G V+ SG ++A+K + + + E
Sbjct: 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 813 LTEIRHRN-IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L IR ++ H ++ +Y++ G L T L + + F ++ + +
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL---SQRERFTEHEVQIYVGEI 168
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK-FLNPHSSNWTAFAGTFG 930
AL +LH I++ DI +N+LLDS ++DFG++K F+ + F GT
Sbjct: 169 VLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 931 YAAPEIAHMMRA--TEKYDVHSFGVLALEVIKGNHP 964
Y AP+I + + D S GVL E++ G P
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 9 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 123
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 179
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFI--VSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
E+ L + H +I+K+ G C + + V EY+ GSL L G Q +
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV----GLAQLLL 115
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF- 925
+ + ++YLH +H ++++NVLLD++ + DFG+AK + P +
Sbjct: 116 FAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVR 171
Query: 926 ----AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF------ 975
+ F Y APE + DV SFGV E++ T F+
Sbjct: 172 EDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQG 230
Query: 976 SNMITEINQNLD--HRLPTPSR 995
+ + + L+ RLP P R
Sbjct: 231 QMTVLRLTELLERGERLPRPDR 252
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFI--VSEYLDRGSLTTILKDDAAAKEFGWNQRMN 866
E+ L + H +I+K+ G C + + V EY+ GSL L G Q +
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV----GLAQLLL 116
Query: 867 VIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF- 925
+ + ++YLH +H ++++NVLLD++ + DFG+AK + P +
Sbjct: 117 FAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVR 172
Query: 926 ----AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF------ 975
+ F Y APE + DV SFGV E++ T F+
Sbjct: 173 EDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQG 231
Query: 976 SNMITEINQNLD--HRLPTPSR 995
+ + + L+ RLP P R
Sbjct: 232 QMTVLRLTELLERGERLPRPDR 253
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 768 GKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGF 827
GK + + YK + + KF S+ L + E+ L +RH +IIK +
Sbjct: 23 GKVKLATHYKTQQKVAL-----KFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV 77
Query: 828 CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIV 887
+ +V EY I++ ++ G + + A+ Y H IV
Sbjct: 78 ITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG----RRFFQQIICAIEYCHRH---KIV 130
Query: 888 HGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH-MMRATEKY 946
H D+ +N+LLD ++DFG++ + + T+ G+ YAAPE+ + + A +
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVINGKLYAGPEV 189
Query: 947 DVHSFGVLALEVIKGNHPRD 966
DV S G++ ++ G P D
Sbjct: 190 DVWSCGIVLYVMLVGRLPFD 209
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 87/223 (39%), Gaps = 42/223 (18%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
DF K +G+G G V A P+G I A+KK FD+ L E+ L +H
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP---FDKPLFALRTLREIKILKHFKH 68
Query: 819 RNIIKFHGFC-----SNAQHSFIVSEY----LDRGSLTTILKDDAAAKEFGWNQRMNVIK 869
NII N +I+ E L R T +L DD I
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI---------QYFIY 119
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP----------HS 919
A+ LH ++H D+ N+L++S + V DFG+A+ ++
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKY----DVHSFGVLALEV 958
S T T Y APE+ M + KY DV S G + E+
Sbjct: 177 SGMTEXVATRWYRAPEV---MLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVVAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L+ +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD------HERMSYL--LYQMLVG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S GV+ E+IKG ++ I + N+ ++ +L TPS +
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKGG--------VLFPGTDHIDQWNKVIE-QLGTPSPEF 248
Query: 998 MDKL 1001
M KL
Sbjct: 249 MKKL 252
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 59
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H NI+K ++V E+L + L + D +A + + + LS
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGLS 117
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
+ H ++H D+ +N+L+++E ++DFG+A+ +T T Y APEI
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 937 AHMMR-ATEKYDVHSFGVLALEVI 959
+ + D+ S G + E++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
++DF +GKG G V E +G +A+K +++ DE+A + E L
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQ 63
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VA 872
RH + + F ++ + F++ EY + G L L + E +R +
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIV 118
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
+AL YLH +V+ DI +N++LD + ++DFG+ K + F GT Y
Sbjct: 119 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 175
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ D GV+ E++ G P
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
++DF +GKG G V E +G +A+K +++ DE+A + E L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQ 60
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VA 872
RH + + F ++ + F++ EY + G L L + E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
+AL YLH +V+ DI +N++LD + ++DFG+ K + F GT Y
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ D GV+ E++ G P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
++DF +GKG G V E +G +A+K +++ DE+A + E L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQ 60
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VA 872
RH + + F ++ + F++ EY + G L L + E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
+AL YLH +V+ DI +N++LD + ++DFG+ K + F GT Y
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ D GV+ E++ G P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 66
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 120
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T T
Sbjct: 121 QGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 205
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 66
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 120
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T T
Sbjct: 121 QGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 25/206 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G G GSV Y A L + AVKK + F + E+ L ++H N+I
Sbjct: 36 VGSGAYGSVCSAYDARLRQKV--AVKKLSRP--FQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 824 FHGFCSNA------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ A ++V+ + L I+K A + E +++G L Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQLLRG----LKY 146
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+H I+H D+ NV ++ + E + DFG+A+ + T + T Y APEI
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD---EEMTGYVATRWYRAPEIM 200
Query: 938 -HMMRATEKYDVHSFGVLALEVIKGN 962
+ M + D+ S G + E+++G
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEI 816
D GE+ +G G+ V K E +G+ +A K K ++E EV L ++
Sbjct: 15 DIGEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV 72
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H N+I H N ++ E + G L L + E + + IK + + ++
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQILDGVN 129
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
YLH I H D+ +N++L ++ + DFG+A + + F FG
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKNIFGTP 182
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ APEI + + D+ S GV+ ++ G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 39/234 (16%)
Query: 755 IKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
++ DF E +G+G G V KA +A+KK L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVXLL 56
Query: 814 TEIRH-------------RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG 860
+ H RN +K FI EY + +L ++ + ++
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ-- 114
Query: 861 WNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN---- 916
++ + + + ALSY+H I+H ++ N+ +D + DFG+AK ++
Sbjct: 115 RDEYWRLFRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 917 ---------PHSS-NWTAFAGTFGYAAPEIAH-MMRATEKYDVHSFGVLALEVI 959
P SS N T+ GT Y A E+ EK D +S G++ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
++DF +GKG G V E +G +A+K +++ DE+A + E L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQ 60
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VA 872
RH + + F ++ + F++ EY + G L L + E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
+AL YLH +V+ DI +N++LD + ++DFG+ K + F GT Y
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ D GV+ E++ G P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
++DF +GKG G V E +G +A+K +++ DE+A + E L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQ 60
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VA 872
RH + + F ++ + F++ EY + G L L + E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
+AL YLH +V+ DI +N++LD + ++DFG+ K + F GT Y
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ D GV+ E++ G P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
++DF +GKG G V E +G +A+K +++ DE+A + E L
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQ 65
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VA 872
RH + + F ++ + F++ EY + G L L + E +R +
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIV 120
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
+AL YLH +V+ DI +N++LD + ++DFG+ K + F GT Y
Sbjct: 121 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 177
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ D GV+ E++ G P
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ H NI+K ++V E+L + L T + D +A + + + L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
++ H ++H D+ +N+L+++E ++DFG+A+ + T Y APE
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 936 IAHMMR-ATEKYDVHSFGVLALEVI 959
I + + D+ S G + E++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
++DF +GKG G V E +G +A+K +++ DE+A + E L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQ 60
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG-VA 872
RH + + F ++ + F++ EY + G L L + E +R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIV 115
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
+AL YLH +V+ DI +N++LD + ++DFG+ K + F GT Y
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ D GV+ E++ G P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEI 816
D GE+ +G G+ V K E +G+ +A K K ++E EV L ++
Sbjct: 15 DIGEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV 72
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H N+I H N ++ E + G L L + E + + IK + + ++
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQILDGVN 129
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
YLH I H D+ +N++L ++ + DFG+A + + F FG
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKNIFGTP 182
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ APEI + + D+ S GV+ ++ G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEI 816
D GE+ +G G+ V K E +G+ +A K K ++E EV L ++
Sbjct: 15 DIGEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV 72
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H N+I H N ++ E + G L L + E + + IK + + ++
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQILDGVN 129
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
YLH I H D+ +N++L ++ + DFG+A + + F FG
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKNIFGTP 182
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ APEI + + D+ S GV+ ++ G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 59
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 113
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T
Sbjct: 114 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 166
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 80
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T Y
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 16/214 (7%)
Query: 760 DFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
D G +Y IG+G G V A + + + A+KK + F+ L E+ L
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILL 81
Query: 815 EIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
RH NII + + Y+ + + T L + + + +
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP---HSSNWTAFAGTFGY 931
L Y+H ++H D+ N+LL++ + + DFG+A+ +P H+ T Y
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 932 AAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHP 964
APEI + T+ D+ S G + E++ N P
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 231
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 9/209 (4%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLF-DEMADQDEFLNEVLALTE 815
+ DF +GKG G V +E + ++AVK ++ D+ + VLAL
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ + + H + V EY++ G L ++ KE + +A L
Sbjct: 400 -KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGL 455
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
+L I++ D+ NV+LDSE ++DFG+ K F GT Y APE
Sbjct: 456 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE 512
Query: 936 IAHMMRATEKYDVHSFGVLALEVIKGNHP 964
I + D +FGVL E++ G P
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 9 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 123
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 179
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 180 TPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 775 VYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNA- 831
VY+A+ + SG +A+K+ LL +E + EV + ++ H NI++F CS A
Sbjct: 44 VYEAQDVGSGREYALKR----LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF---CSAAS 96
Query: 832 ---------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
Q F++ L +G L LK + + + + A+ ++H
Sbjct: 97 IGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ- 155
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH---- 938
PPI+H D+ +N+LL ++ + DFG A ++ H +++ A EI
Sbjct: 156 KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS-HYPDYSWSAQRRALVEEEITRNTTP 214
Query: 939 MMRATEKYDVHS 950
M R E D++S
Sbjct: 215 MYRTPEIIDLYS 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 749 FLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQ 803
F +E+ K I + E+Y +G G GSV A + +G AVKK + F +
Sbjct: 28 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHA 85
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD----AAAKEF 859
E+ L ++H N+I + A+ + E+ D +T ++ D ++
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 860 GWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHS 919
+ +I + L Y+H I+H D+ N+ ++ + E + DFG+A+ +
Sbjct: 143 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--- 196
Query: 920 SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGN 962
T Y APEI + M + D+ S G + E++ G
Sbjct: 197 DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKF-NSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
IG+G G V+K +G I A+KKF S+ D+ + L E+ L +++H N++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESE---DDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA----NALSYLH- 879
+ +V EY D L + + E +++K + A+++ H
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPE-------HLVKSITWQTLQAVNFCHK 120
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM 939
H+C +H D+ +N+L+ + DFG A+ L S + T Y +PE +
Sbjct: 121 HNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPE---L 173
Query: 940 MRATEKY----DVHSFGVLALEVIKG 961
+ +Y DV + G + E++ G
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G+V+KA+ + I A+K+ +L D+ L E+ L E++H+NI++ H
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV--RLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ + +V E+ D+ D+ + + + + L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TE 944
++H D+ +N+L++ E +++FG+A+ ++A T Y P++ + +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 945 KYDVHSFGVLALEVIKGNHP 964
D+ S G + E+ P
Sbjct: 182 SIDMWSAGCIFAELANAGRP 201
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L+ +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S G + E+IKG ++ I + N+ ++ +L TPS +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGG--------VLFPGTDHIDQWNKVIE-QLGTPSPEF 248
Query: 998 MDKL 1001
M KL
Sbjct: 249 MKKL 252
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD--DAAAKEFGWNQRMNVIKG--- 870
+ H NI+K ++V E+L + LKD DA+A + +IK
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-----SMDLKDFMDASALT---GIPLPLIKSYLF 113
Query: 871 -VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
+ L++ H ++H D+ +N+L+++E ++DFG+A+ + T
Sbjct: 114 QLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 930 GYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 21/248 (8%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELPSG-IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+DF IG+G G V +L + +FA+K N + + A+ F E L
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-KRAETACFREERDVLVNGD 132
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK--DDAAAKEFGWNQRMNVIKGVANAL 875
+ I H + + ++V +Y G L T+L +D +E ++ + +++
Sbjct: 133 SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-DSV 191
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG-IAKFLNPHSSNWTAFAGTFGYAAP 934
LH+ VH DI N+L+D ++DFG K + + + GT Y +P
Sbjct: 192 HQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISP 245
Query: 935 EIAHMM-----RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
EI M R + D S GV E++ G P Y + ++ + +N +
Sbjct: 246 EILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF-YAESLVETYGKI---MNHKERFQ 301
Query: 990 LPTPSRDV 997
PT DV
Sbjct: 302 FPTQVTDV 309
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 34/245 (13%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF- 824
IG G QG V A + GI AVKK + F E++ L + H+NII
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRP--FQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 825 -----HGFCSNAQHSFIVSEYLDRGSLTTI-LKDDAAAKEFGWNQRMNVIKGVANALSYL 878
Q ++V E +D I ++ D + Q + IK + +A
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---- 143
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPEI 936
I+H D+ N+++ S+ + DFG+A+ S+N+ T + T Y APE+
Sbjct: 144 ------GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEV 194
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996
M E D+ S G + E++KG S F ++ I + N+ ++ +L TPS +
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKG-------SVIFQG-TDHIDQWNKVIE-QLGTPSAE 245
Query: 997 VMDKL 1001
M L
Sbjct: 246 FMAAL 250
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 411 NLTSLERLRFNQNNL--FGKVYEAFGDHPNLTFLDLSQNNL-YGEISFNWRNFPKLGTFN 467
+LT LE L N L K+ E +L LD+SQN++ Y E + L + N
Sbjct: 346 HLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405
Query: 468 ASMN----NIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSG 523
S N I+ +PP I +VLDL SN I IP Q KL +L +L + NQL
Sbjct: 406 MSSNILTDTIFRCLPPRI------KVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKS 458
Query: 524 GVPLEFGSLTELQYLDLSANKLSSSIPK 551
F LT LQ + L N S P+
Sbjct: 459 VPDGIFDRLTSLQKIWLHTNPWDCSCPR 486
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 27/164 (16%)
Query: 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNSL--FGFIPSVIGNLKSLFELDLSENQLF- 282
LD S N L ++ + +L+ L L L N L I + +KSL +LD+S+N +
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 283 ----GSIPLSFS----NLSS--------------LTLMSLFNNSLSGSIPPTQGNLEALS 320
G + S N+SS + ++ L +N + SIP LEAL
Sbjct: 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKI-KSIPKQVVKLEALQ 447
Query: 321 ELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364
EL + NQL V L+SL+ ++L+ N + P I YL
Sbjct: 448 ELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP-RIDYL 490
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 370 LELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL--IPKSFRNLTSLERLRFNQNNLFG 427
L+ N L+ + + G+LT+L + + N L L I + + SL++L +QN++
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSV-- 386
Query: 428 KVYEAFGD---HPNLTFLDLSQNNLYGEISFNWRNFP-KLGTFNASMNNIYGSIPPEIGD 483
E GD +L L++S N L I +R P ++ + N I SIP ++
Sbjct: 387 SYDEKKGDCSWTKSLLSLNMSSNILTDTI---FRCLPPRIKVLDLHSNKI-KSIPKQVVK 442
Query: 484 SSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVP 526
LQ L+++SN + F++L SL K+ L+ N P
Sbjct: 443 LEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNI--YGSIPPEIGDSSKLQVLDLSSNHIV- 498
LD S N L + N + +L T MN + I LQ LD+S N +
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 499 --GKIPVQFEK-LFSLNKLILNLNQLSGGVPLEFGSLT-ELQYLDLSANKLSSSIPKSMG 554
K + K L SLN ++ N L+ + F L ++ LDL +NK+ S IPK +
Sbjct: 389 DEKKGDCSWTKSLLSLN---MSSNILTDTI---FRCLPPRIKVLDLHSNKIKS-IPKQVV 441
Query: 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L L LN+++NQ F++L L ++ L N
Sbjct: 442 KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNH 160
P + L+L N + +IP Q+ L L+ L++ +NQL V LT L+ ++ N
Sbjct: 421 PRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479
Query: 161 LHGSIP 166
S P
Sbjct: 480 WDCSCP 485
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 30/192 (15%)
Query: 122 SNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLH--GSIPLEIGKLSLINVLT 179
S +S LD NN L+ + + GHLT L L +N L I ++ + L
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380
Query: 180 LCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGSIPF 239
+ N+ S + SL L++S N L +I
Sbjct: 381 ISQNSVS-----------------------YDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLM 298
L + +L L+ N + IP + L++L EL+++ NQL S+P F L+SL +
Sbjct: 418 CLP--PRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTSLQKI 473
Query: 299 SLFNNSLSGSIP 310
L N S P
Sbjct: 474 WLHTNPWDCSCP 485
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 111/281 (39%), Gaps = 37/281 (13%)
Query: 767 IGKGRQGSVY--------KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G G VY K E + + AVK N + ++ EFLNE +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRV--AVKTVNESA---SLRERIEFLNEASVMKGFTC 76
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG-------WNQRMNVIKGV 871
++++ G S Q + +V E + G L + L+ E + + + +
Sbjct: 77 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG- 930
A+ ++YL+ VH D++++N ++ + + DFG+ + + G
Sbjct: 137 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ APE T D+ SFGV+ E+ P Y + + + LD
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFVMD-GGYLDQ 250
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P R + ++ +C +P+ RPT ++ NLL
Sbjct: 251 PDNCPER--------VTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 131/326 (40%), Gaps = 27/326 (8%)
Query: 270 SLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329
S+ L+L E++ +F + L + L L G +P L L +L L +N
Sbjct: 252 SVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHF 310
Query: 330 DGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLT 389
D + S N SL LY+ G +K L HL +GNL
Sbjct: 311 DQLCQISAANFPSLTHLYIR------------GNVKKL--------HLGVGCLEKLGNLQ 350
Query: 390 KLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
L L + + +NL+ L+ L + N G +AF + P L LDL+ L
Sbjct: 351 TLDLSHN-DIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRL 409
Query: 450 YGEISFN-WRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ---F 505
+ + ++N L N + + S + L+ L+L NH +
Sbjct: 410 HINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLL 469
Query: 506 EKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLS 565
+ + SL LIL+ L F SL ++ ++DLS N L+ S+ +L + YLNL+
Sbjct: 470 QTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKGI-YLNLA 528
Query: 566 NNQFNHKIPTEFEKLIHLSELDLSHN 591
N N P L S ++LSHN
Sbjct: 529 ANSINIISPRLLPILSQQSTINLSHN 554
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 103/262 (39%), Gaps = 14/262 (5%)
Query: 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL 401
S+ +L L ++ F + L +L+L HL G +P + L L + + NH
Sbjct: 252 SVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHF 310
Query: 402 FGLIPKSFRNLTSLERLRFNQN----NLFGKVYEAFGDHPNLTFLDLSQNNLYGE--ISF 455
L S N SL L N +L E G NL LDLS N++ S
Sbjct: 311 DQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLG---NLQTLDLSHNDIEASDCCSL 367
Query: 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKL 514
+N L T N S N G + +L++LDL+ + P F+ L L L
Sbjct: 368 QLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVL 427
Query: 515 ILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS-SIPKS--MGNLSKLHYLNLSNNQFNH 571
L L L L++L+L N +I K+ + + L L LS+
Sbjct: 428 NLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLS 487
Query: 572 KIPTEFEKLIHLSELDLSHNFL 593
F L +S +DLSHN L
Sbjct: 488 IDQQAFHSLGKMSHVDLSHNSL 509
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 158/387 (40%), Gaps = 85/387 (21%)
Query: 288 SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLY 347
+FS L +LT + L ++ T + LS L L N L + S+ SL+ L+
Sbjct: 49 TFSRLMNLTFLDLTRCQINWIHEDTFQSHHQLSTLVLTGNPLIFMAETSLNGPKSLKHLF 108
Query: 348 LYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV-IPHSI--GNLTKLVLVNMCENHLFGL 404
L G L + L++L L L NH+S + P NL L N +++
Sbjct: 109 LIQTGISNLEFIPVHNLENLESLYLGSNHISSIKFPKDFPARNLKVLDFQNNAIHYI--- 165
Query: 405 IPKSFRNLTSLER-----LRFNQNNLFG--------KVYEA--FGDHPNLTFLDLSQNNL 449
S ++ SLE+ L FN NN+ G ++++ FG PNL+ +
Sbjct: 166 ---SREDMRSLEQAINLSLNFNGNNVKGIELGAFDSTIFQSLNFGGTPNLSVI------- 215
Query: 450 YGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLF 509
FN G N++ +++ +I D D+SS + G + E
Sbjct: 216 -----FN-------GLQNSTTQSLWLGTFEDIDDE------DISSAMLKGLCEMSVE--- 254
Query: 510 SLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQF 569
SLN L ++ S F T+LQ LDL+A L +P M L+ L L LS N
Sbjct: 255 SLN---LQEHRFSDISSTTFQCFTQLQELDLTATHL-KGLPSGMKGLNLLKKLVLSVNH- 309
Query: 570 NHKIPTEFEKLIHLSELD---LSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFE 626
F++L +S + L+H +++G + L GC E
Sbjct: 310 -------FDQLCQISAANFPSLTHLYIRGNVKK------------------LHLGVGCLE 344
Query: 627 EMRSLSRIDIAYNELQGPIPNSTAFKD 653
++ +L +D+++N+++ S K+
Sbjct: 345 KLGNLQTLDLSHNDIEASDCCSLQLKN 371
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 113/290 (38%), Gaps = 33/290 (11%)
Query: 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184
++L+ LDL L G +P + L L+ L VNH ++ ++S N +L H
Sbjct: 275 TQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFD-----QLCQISAANFPSLTHLY 328
Query: 185 FSGRIPP-SLGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGS--IPFSL 241
G + LG + L +L LDLS N + S L
Sbjct: 329 IRGNVKKLHLGV-------------------GCLEKLGNLQTLDLSHNDIEASDCCSLQL 369
Query: 242 ANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMSL 300
NLS+L L L N G L LDL+ +L + P S F NL L +++L
Sbjct: 370 KNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNL 429
Query: 301 FNNSLSGSIPPTQGNLEALSELGLYINQL-DGVIPPS--IGNLSSLRTLYLYDNGFYGLV 357
L S L L L L N DG I + + + SL L L G +
Sbjct: 430 TYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSID 489
Query: 358 PNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPK 407
L +S ++L N L+ S+ +L K + +N+ N + + P+
Sbjct: 490 QQAFHSLGKMSHVDLSHNSLTCDSIDSLSHL-KGIYLNLAANSINIISPR 538
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 111/281 (39%), Gaps = 37/281 (13%)
Query: 767 IGKGRQGSVY--------KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G G VY K E + + AVK N + ++ EFLNE +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRV--AVKTVNESA---SLRERIEFLNEASVMKGFTC 79
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG-------WNQRMNVIKGV 871
++++ G S Q + +V E + G L + L+ E + + + +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG- 930
A+ ++YL+ VH D++++N ++ + + DFG+ + + G
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ APE T D+ SFGV+ E+ P Y + + + LD
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFVMD-GGYLDQ 253
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P R + ++ +C +P+ RPT ++ NLL
Sbjct: 254 PDNCPER--------VTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 60
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD--DAAAKEFGWNQRMNVIKG--- 870
+ H NI+K ++V E+L + LKD DA+A + +IK
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-----SMDLKDFMDASALT---GIPLPLIKSYLF 112
Query: 871 -VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
+ L++ H ++H D+ +N+L+++E ++DFG+A+ + T
Sbjct: 113 QLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 930 GYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With
A Staurosporine Analogue
Length = 290
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 49/282 (17%)
Query: 767 IGKGRQGSVYKAELP-----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+GKG GSV +G + AVK QL Q +F E+ L + I
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVK----QLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 822 IKFHG--FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYL- 878
+K+ G + +V EYL G L L+ A ++ + + + YL
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 128
Query: 879 HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF-----AGTFGYAA 933
C VH D++++N+L++SE ++DFG+AK L P + + F Y A
Sbjct: 129 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDXXVVREPGQSPIFWY-A 182
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD------ 987
PE + + DV SFGV+ E+ Y + S + + + D
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT------YCDKSCSPSAEFLRMMGCERDVPALCR 236
Query: 988 --------HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
RLP P + + E+ LC SP+ RP+
Sbjct: 237 LLELLEEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPS 274
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 807 LNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM 865
L EV L ++ H NII+ F+V + + +G L L + E + M
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925
+ V AL L+ IVH D+ +N+LLD + ++DFG + L+P
Sbjct: 118 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 170
Query: 926 AGTFGYAAPEIAHMMRAT------EKYDVHSFGVLALEVIKGNHP 964
GT Y APEI ++ D+ S GV+ ++ G+ P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G +VYK + + + A + + L +++ F E L ++H NI++F+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 826 ----GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAK---EFGWNQRMNVIKGVANALSYL 878
+ +V+E G+L T LK K W ++ ++KG L +L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ--ILKG----LQFL 145
Query: 879 HHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
H PPI+H D+ N+ + + D G+A +S A GT + APE
Sbjct: 146 HTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRASFAKAVIGTPEFXAPE-X 201
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + E DV++FG LE +P
Sbjct: 202 YEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L+ +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD------HERMSYL--LYQMLVG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S G + E+IKG ++ I + N+ ++ +L TPS +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGG--------VLFPGTDHIDQWNKVIE-QLGTPSPEF 248
Query: 998 MDKL 1001
M KL
Sbjct: 249 MKKL 252
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ H NI+K ++V E++D+ L + D +A + + + L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE 935
++ H ++H D+ +N+L+++E ++DFG+A+ + T Y APE
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 936 IAHMMR-ATEKYDVHSFGVLALEVI 959
I + + D+ S G + E++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKD--DAAAKEFGWNQRMNVIKG--- 870
+ H NI+K ++V E+L + LKD DA+A + +IK
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKDFMDASALT---GIPLPLIKSYLF 110
Query: 871 -VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
+ L++ H ++H D+ +N+L+++E ++DFG+A+ + T
Sbjct: 111 QLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 930 GYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 9 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE---EEATEFLKQI 123
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 179
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 25/206 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G G GSV Y A L + AVKK + F + E+ L ++H N+I
Sbjct: 36 VGSGAYGSVCSAYDARLRQKV--AVKKLSRP--FQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 824 FHGFCSNA------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ A ++V+ + L I+K A + E +++G L Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLRG----LKY 146
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+H I+H D+ NV ++ + E + DFG+A+ + T + T Y APEI
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD---EEMTGYVATRWYRAPEIM 200
Query: 938 -HMMRATEKYDVHSFGVLALEVIKGN 962
+ M + D+ S G + E+++G
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 224 SILDLSQNQLRGSIPFSLAN-LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282
+ LDL N L+ S+P + + L++L LYL N L V L SL L+LS NQL
Sbjct: 31 TYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ 89
Query: 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342
F L+ L ++L N L L L +L LY NQL V L+S
Sbjct: 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149
Query: 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL 388
L+ ++L+DN + P I YL E H SGV+ +S G++
Sbjct: 150 LQYIWLHDNPWDCTCPG-IRYLS-----EWINKH-SGVVRNSAGSV 188
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
S+P G ++ LDL +N + F++L SL +L L N+L F LT L
Sbjct: 21 SVP--TGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78
Query: 536 QYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
YL+LS N+L S L++L L L+ NQ F+KL L +L L N L+
Sbjct: 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 427 GKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFN--ASMNNIY------GSIP 478
G+ G T+LDL N+L ++ P G F+ S+ +Y S+P
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSL--------KSLPN-GVFDELTSLTQLYLGGNKLQSLP 68
Query: 479 PEIGDS-SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQY 537
+ + + L L+LS+N + F+KL L +L LN NQL F LT+L+
Sbjct: 69 NGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKD 128
Query: 538 LDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP 574
L L N+L S L+ L Y+ L +N ++ P
Sbjct: 129 LRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%)
Query: 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNL 564
F KL SL L L+ NQL F LT+L+ L L+ N+L S L++L L L
Sbjct: 72 FNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131
Query: 565 SNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
NQ F++L L + L N P
Sbjct: 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 35/86 (40%)
Query: 364 LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
L SL++L L N L + LT L +N+ N L L F LT L+ L N N
Sbjct: 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTN 110
Query: 424 NLFGKVYEAFGDHPNLTFLDLSQNNL 449
L F L L L QN L
Sbjct: 111 QLQSLPDGVFDKLTQLKDLRLYQNQL 136
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN-LEALSELGLYINQLDGV 332
LDL N L F L+SLT + L N L S+P N L +L+ L L NQL +
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLV 392
L+ L+ L L N L L L L L +N L V LT L
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 151
Query: 393 LVNMCEN 399
+ + +N
Sbjct: 152 YIWLHDN 158
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 119/293 (40%), Gaps = 33/293 (11%)
Query: 318 ALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL 377
L EL L L +P + LS+L+ L L N F L SL+ L +
Sbjct: 279 GLQELDLTATHL-SELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSI----- 332
Query: 378 SGVIPHSIGNLTKLVLVNMCENHLFGL---------IPKS------FRNLTSLERLRFNQ 422
GN +L L C +L L I S RNL+ L+ L +
Sbjct: 333 -------KGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSY 385
Query: 423 NNLFGKVYEAFGDHPNLTFLDLSQNNL-YGEISFNWRNFPKLGTFNASMNNIYGSIPPEI 481
N EAF + P L LDL+ L + ++N L N S + + S
Sbjct: 386 NEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLF 445
Query: 482 GDSSKLQVLDLSSNHI-VGKIPV--QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYL 538
LQ L+L NH G I + L L L+L+ LS F SL + ++
Sbjct: 446 DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505
Query: 539 DLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
DLS N+L+SS +++ +L + YLNL++N + +P+ L ++L N
Sbjct: 506 DLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQN 557
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 7/216 (3%)
Query: 216 VMGNLNSLSILDLSQNQLRGS--IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFE 273
+ NL +L LDLS + + S L NLS+L L L N L
Sbjct: 345 CLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404
Query: 274 LDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL-DG 331
LDL+ +L S F NL L +++L ++ L S L AL L L N G
Sbjct: 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKG 464
Query: 332 VIPP--SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLT 389
I S+ L L L L + + LK ++ ++L N L+ ++ +L
Sbjct: 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL- 523
Query: 390 KLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425
K + +N+ NH+ ++P L+ + QN L
Sbjct: 524 KGIYLNLASNHISIILPSLLPILSQQRTINLRQNPL 559
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L+ +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S G + E+IKG ++ I + N+ ++ +L TPS +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGG--------VLFPGTDHIDQWNKVIE-QLGTPSPEF 248
Query: 998 MDKL 1001
M KL
Sbjct: 249 MKKL 252
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 9 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 123
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 179
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 25/206 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
+G G GSV Y A L + AVKK + F + E+ L ++H N+I
Sbjct: 28 VGSGAYGSVCSAYDARLRQKV--AVKKLSRP--FQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 824 FHGFCSNA------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ A ++V+ + L I+K A + E +++G L Y
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLRG----LKY 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+H I+H D+ NV ++ + E + DFG+A+ + T + T Y APEI
Sbjct: 139 IHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQAD---EEMTGYVATRWYRAPEIM 192
Query: 938 -HMMRATEKYDVHSFGVLALEVIKGN 962
+ M + D+ S G + E+++G
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 9 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 123
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 179
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 61/287 (21%), Positives = 116/287 (40%), Gaps = 46/287 (16%)
Query: 760 DFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
DF E IG G G V+KA+ G + +K+ +E A++ EV AL ++ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAER-----EVKALAKLDH 63
Query: 819 RNIIKFHG-----------FCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWN 862
NI+ ++G N+ S FI E+ D+G+L ++ K
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKV 122
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
+ + + + + Y+H L ++ D+ N+ L + + DFG+ L
Sbjct: 123 LALELFEQITKGVDYIHSKKL---INRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX 179
Query: 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI 982
+ GT Y +PE ++ D+++ G++ E++ H D F+++ I
Sbjct: 180 RS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFETSKFFTDLRDGI 235
Query: 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
++ + ++ KL+S + PE RP ++ L
Sbjct: 236 ISDI---FDKKEKTLLQKLLS----------KKPEDRPNTSEILRTL 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 41/283 (14%)
Query: 767 IGKGRQGSVY--------KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G G VY K E + + AVK N + ++ EFLNE +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRV--AVKTVNESA---SLRERIEFLNEASVMKGFTC 78
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG-------WNQRMNVIKGV 871
++++ G S Q + +V E + G L + L+ E + + + +
Sbjct: 79 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
A+ ++YL+ VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 193
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNL 986
+ APE T D+ SFGV+ E+ P Y + + + L
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFVMD-GGYL 250
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D P R + ++ +C +P+ RPT ++ NLL
Sbjct: 251 DQPDNCPER--------VTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L+ +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S G + E+IKG ++ I + N+ ++ +L TPS +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGG--------VLFPGTDHIDQWNKVIE-QLGTPSPEF 248
Query: 998 MDKL 1001
M KL
Sbjct: 249 MKKL 252
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 10/152 (6%)
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
+H NII + +H ++V+E + G L L K F + V+ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVE 135
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHE----AHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
YLH +VH D+ N+L E + DFG AK L + T +
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 933 APEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ E D+ S G+L ++ G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 12/153 (7%)
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+H NII + +H ++V+E + G L IL+ K F + V+ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ----KFFSEREASFVLHTIGKTV 134
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHE----AHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
YLH +VH D+ N+L E + DFG AK L + T +
Sbjct: 135 EYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF 191
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ E D+ S G+L ++ G P
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 9 VDDYYDTGEE--LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 123
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 179
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 41/283 (14%)
Query: 767 IGKGRQGSVY--------KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G G VY K E + + AVK N + ++ EFLNE +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRV--AVKTVNESA---SLRERIEFLNEASVMKGFTC 79
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG-------WNQRMNVIKGV 871
++++ G S Q + +V E + G L + L+ E + + + +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
A+ ++YL+ VH D++++N ++ + + DFG+ + + + +++ G
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 194
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNL 986
+ APE T D+ SFGV+ E+ P Y + + + L
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFVMD-GGYL 251
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D P R + ++ +C +P+ RPT ++ NLL
Sbjct: 252 DQPDNCPER--------VTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 9 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 123
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 179
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 29/273 (10%)
Query: 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEV-LALTEI 816
DD +G+G G V K +PSG I AVK+ + + +Q L ++ +++ +
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDLDISMRTV 63
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA---- 872
+ F+G +I E +D T++ K + G +++ +A
Sbjct: 64 DCPFTVTFYGALFREGDVWICMELMD----TSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYA 932
AL +LH ++H D+ NVL+++ + + DFGI+ +L + AG Y
Sbjct: 120 KALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK-DIDAGCKPYM 176
Query: 933 APEIAHMMRATEKY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988
APE + + Y D+ S G+ +E+ P D T F ++ E
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE------- 229
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
P+P ++ CL ++ + RPT
Sbjct: 230 --PSPQLPADKFSAEFVDFTSQCLKKNSKERPT 260
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 807 LNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM 865
L EV L ++ H NII+ F+V + + +G L L + E + M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925
+ V AL L+ IVH D+ +N+LLD + ++DFG + L+P +
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSV 183
Query: 926 AGTFGYAAPEIAHMMRAT------EKYDVHSFGVLALEVIKGNHP 964
GT Y APEI ++ D+ S GV+ ++ G+ P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 9 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 123
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 179
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E+ L ++ H IIK F +A+ +IV E ++ G L + + KE
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---Y 258
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHSSNWTA 924
+ A+ YLH + I+H D+ +NVLL S+ E ++DFG +K L +S
Sbjct: 259 FYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRT 314
Query: 925 FAGTFGYAAPEI------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978
GT Y APE+ A RA D S GV+ + G P T S +
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYPPFSEHRTQV-SLKDQ 370
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
IT N +P +V +K + +++ LV P+AR T ++
Sbjct: 371 ITSGKYNF---IPEVWAEVSEKALDLVKKL---LVVDPKARFTTEEA 411
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E+ L ++ H IIK F +A+ +IV E ++ G L + + KE
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---Y 244
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHSSNWTA 924
+ A+ YLH + I+H D+ +NVLL S+ E ++DFG +K L +S
Sbjct: 245 FYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRT 300
Query: 925 FAGTFGYAAPEI------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978
GT Y APE+ A RA D S GV+ + G P T S +
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYPPFSEHRTQV-SLKDQ 356
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
IT N +P +V +K + +++ LV P+AR T ++
Sbjct: 357 ITSGKYNF---IPEVWAEVSEKALDLVKKL---LVVDPKARFTTEEA 397
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNII 822
IG G G+VYKA P SG A+K + ++ E + EV L + H N++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 823 KFHGFCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ C+ ++ +V E++D+ L T L D A ++++ L +
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH +C IVH D+ +N+L+ S ++DFG+A+ + + + T Y APE+
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TLWYRAPEVL 183
Query: 938 HMMRATEKYDVHSFGVLALEVIK 960
D+ S G + E+ +
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFR 206
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 110/281 (39%), Gaps = 37/281 (13%)
Query: 767 IGKGRQGSVY--------KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G G VY K E + + AVK N + ++ EFLNE +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRV--AVKTVNESA---SLRERIEFLNEASVMKGFTC 79
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG-------WNQRMNVIKGV 871
++++ G S Q + +V E + G L + L+ E + + + +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG- 930
A+ ++YL+ VH D++++N ++ + + DFG+ + + G
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ APE T D+ SFGV+ E+ P Y + + + LD
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFVMD-GGYLDQ 253
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P R + ++ +C +P RPT ++ NLL
Sbjct: 254 PDNCPER--------VTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 62
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 116
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 117 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 61/301 (20%)
Query: 760 DFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
DF E IG G G V+KA+ G + +++ +E A++ EV AL ++ H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYN---NEKAER-----EVKALAKLDH 64
Query: 819 RNIIKFHGFC----------------------SNAQHS--------FIVSEYLDRGSLTT 848
NI+ ++G C N+++S FI E+ D+G+L
Sbjct: 65 VNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ 123
Query: 849 ILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908
++ K + + + + + Y+H L +H D+ N+ L + + D
Sbjct: 124 WIEKRRGEK-LDKVLALELFEQITKGVDYIHSKKL---IHRDLKPSNIFLVDTKQVKIGD 179
Query: 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYV 968
FG+ L + T GT Y +PE ++ D+++ G++ E++ H D
Sbjct: 180 FGLVTSLK-NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTA 235
Query: 969 STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNL 1028
F+++ I ++ + ++ KL+S + PE RP ++
Sbjct: 236 FETSKFFTDLRDGIISDI---FDKKEKTLLQKLLS----------KKPEDRPNTSEILRT 282
Query: 1029 L 1029
L
Sbjct: 283 L 283
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 8 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 122
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 178
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 37/281 (13%)
Query: 767 IGKGRQGSVY--------KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G G VY K E + + AVK N + ++ EFLNE +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRV--AVKTVNESA---SLRERIEFLNEASVMKGFTC 79
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG-------WNQRMNVIKGV 871
++++ G S Q + +V E + G L + L+ E + + + +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFG- 930
A+ ++YL+ VH D++++N ++ + + DFG+ + + + G
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988
+ APE T D+ SFGV+ E+ P Y + + + LD
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFVMD-GGYLDQ 253
Query: 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
P R + ++ +C +P+ RPT ++ NLL
Sbjct: 254 PDNCPER--------VTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 16/225 (7%)
Query: 747 GKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQ 803
G +E + D GE+ +G G+ V K E +G+ +A K + +
Sbjct: 1 GTVFRQENVDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSR 58
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ 863
++ EV L EI+H N+I H N ++ E + G L L + + E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EE 115
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHS 919
+K + N + YLH I H D+ +N++L + + DFG+A ++
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FG 171
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + GT + APEI + + D+ S GV+ ++ G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNII 822
IG G G+VYKA P SG A+K + ++ E + EV L + H N++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 823 KFHGFCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ C+ ++ +V E++D+ L T L D A ++++ L +
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH +C IVH D+ +N+L+ S ++DFG+A+ + + T Y APE+
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALAPVVVTLWYRAPEVL 183
Query: 938 HMMRATEKYDVHSFGVLALEVIK 960
D+ S G + E+ +
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFR 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 8 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 122
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 178
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S G + E+IKG ++ I + N+ ++ +L TPS +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGG--------VLFPGTDHIDQWNKVIE-QLGTPSPEF 248
Query: 998 MDKL 1001
M KL
Sbjct: 249 MKKL 252
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 758 IDDF---GEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQDEFLNEVL 811
+DD+ GE+ +G G+ V K E +G+ +A K + +++ EV
Sbjct: 9 VDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 812 ALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV 871
L EI+H N+I H N ++ E + G L L + + E + +K +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQI 123
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAG 927
N + YLH I H D+ +N++L + + DFG+A ++ + + G
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FGNEFKNIFG 179
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
T + APEI + + D+ S GV+ ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 39/231 (16%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL------TTILKDDAAAKEFGWN 862
E+ L ++ H IIK F +A+ +IV E ++ G L LK+ A K + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKE-ATCKLYFYQ 122
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHS 919
+ A+ YLH + I+H D+ +NVLL S+ E ++DFG +K L +
Sbjct: 123 MLL--------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 170
Query: 920 SNWTAFAGTFGYAAPEI------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS 973
S GT Y APE+ A RA D S GV+ + G P T
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYPPFSEHRTQV- 226
Query: 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
S + IT N +P +V +K + +++ LV P+AR T ++
Sbjct: 227 SLKDQITSGKYNF---IPEVWAEVSEKALDLVKK---LLVVDPKARFTTEE 271
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 39/231 (16%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL------TTILKDDAAAKEFGWN 862
E+ L ++ H IIK F +A+ +IV E ++ G L LK+ A K + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKE-ATCKLYFYQ 122
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHS 919
+ A+ YLH + I+H D+ +NVLL S+ E ++DFG +K L +
Sbjct: 123 MLL--------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 170
Query: 920 SNWTAFAGTFGYAAPEI------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS 973
S GT Y APE+ A RA D S GV+ + G P T
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYPPFSEHRTQV- 226
Query: 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
S + IT N +P +V +K + +++ LV P+AR T ++
Sbjct: 227 SLKDQITSGKYNF---IPEVWAEVSEKALDLVKK---LLVVDPKARFTTEE 271
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex
With Inhibitor Pv1533
Length = 322
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 39/231 (16%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL------TTILKDDAAAKEFGWN 862
E+ L ++ H IIK F +A+ +IV E ++ G L LK+ A K + +
Sbjct: 64 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKE-ATCKLYFYQ 121
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHS 919
+ A+ YLH + I+H D+ +NVLL S+ E ++DFG +K L +
Sbjct: 122 MLL--------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 169
Query: 920 SNWTAFAGTFGYAAPEI------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS 973
S GT Y APE+ A RA D S GV+ + G P T
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYPPFSEHRTQV- 225
Query: 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
S + IT N +P +V +K + +++ LV P+AR T ++
Sbjct: 226 SLKDQITSGKYNF---IPEVWAEVSEKALDLVKK---LLVVDPKARFTTEE 270
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And Potentiation
Of Cytotoxic Drugs By Novel Chk2 Inhibitor Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 39/231 (16%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSL------TTILKDDAAAKEFGWN 862
E+ L ++ H IIK F +A+ +IV E ++ G L LK+ A K + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKE-ATCKLYFYQ 122
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHS 919
+ A+ YLH + I+H D+ +NVLL S+ E ++DFG +K L +
Sbjct: 123 MLL--------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 170
Query: 920 SNWTAFAGTFGYAAPEI------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS 973
S GT Y APE+ A RA D S GV+ + G P T
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYPPFSEHRTQV- 226
Query: 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKK 1024
S + IT N +P +V +K + +++ LV P+AR T ++
Sbjct: 227 SLKDQITSGKYNF---IPEVWAEVSEKALDLVKK---LLVVDPKARFTTEE 271
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 90 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 145
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T + Y APE+ + + D+ S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 204
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993
GV+ ++ G +P Y + + M T I + P P
Sbjct: 205 GVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMG-QYEFPNP 244
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 89 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T + Y APE+ + + D+ S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 203
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993
GV+ ++ G +P Y + + M T I + P P
Sbjct: 204 GVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMG-QYEFPNP 243
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 96 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 151
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T + Y APE+ + + D+ S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 210
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993
GV+ ++ G +P Y + + M T I + P P
Sbjct: 211 GVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMG-QYEFPNP 250
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKF---NSQLLFDEMADQDEFLNEVLALTEIR---HR 819
IG G G+VYKA P SG A+K N + + EV L + H
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIST--VREVALLRRLEAFEHP 74
Query: 820 NIIKFHGFCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874
N+++ C+ ++ +V E++D+ L T L D A ++++
Sbjct: 75 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLMRQFLRG 132
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAP 934
L +LH +C IVH D+ +N+L+ S ++DFG+A+ + + T T Y AP
Sbjct: 133 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALTPVVVTLWYRAP 188
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIK 960
E+ D+ S G + E+ +
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEMFR 214
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 95 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 150
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T + Y APE+ + + D+ S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 209
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993
GV+ ++ G +P Y + + M T I + P P
Sbjct: 210 GVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMG-QYEFPNP 249
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 91 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T + Y APE+ + + D+ S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 205
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993
GV+ ++ G +P Y + + M T I + P P
Sbjct: 206 GVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMG-QYEFPNP 245
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 115
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 116 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 60
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 114
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 115 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 58
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H NI+K ++V E++ + L T + D +A + + + L+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFM-DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
+ H ++H D+ +N+L+++E ++DFG+A+ +T T Y APEI
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 937 AHMMR-ATEKYDVHSFGVLALEVI 959
+ + D+ S G + E++
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 59
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 113
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T T
Sbjct: 114 QGLAFCHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF------QL 115
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 116 LQGLAFCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 115
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 116 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 60
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 114
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 115 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKGR G V++ + G AVK F+S+ +E + E E+ +RH NI+ F
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFRE--AEIYQTVMLRHENILGFIA 65
Query: 827 FCSNAQHSF----IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ ++ +VS+Y + GSL L E + + A+ L++LH +
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEI 121
Query: 883 L-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-----GTFGYA 932
+ P I H D+ SKN+L+ ++D G+A + +++ A GT Y
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYM 180
Query: 933 APEI---AHMMRATEKY---DVHSFGVLALEVIK 960
APE+ + M+ E + D+++ G++ E+ +
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKGR G V++ + G AVK F+S+ +E + E E+ +RH NI+ F
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFRE--AEIYQTVMLRHENILGFIA 64
Query: 827 FCSNAQHSF----IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ ++ +VS+Y + GSL L E + + A+ L++LH +
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEI 120
Query: 883 L-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-----GTFGYA 932
+ P I H D+ SKN+L+ ++D G+A + +++ A GT Y
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYM 179
Query: 933 APEI---AHMMRATEKY---DVHSFGVLALEVIK 960
APE+ + M+ E + D+++ G++ E+ +
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKGR G V++ + G AVK F+S+ +E + E E+ +RH NI+ F
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFRE--AEIYQTVMLRHENILGFIA 90
Query: 827 FCSNAQHSF----IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ ++ +VS+Y + GSL L E + + A+ L++LH +
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEI 146
Query: 883 L-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-----GTFGYA 932
+ P I H D+ SKN+L+ ++D G+A + +++ A GT Y
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYM 205
Query: 933 APEI---AHMMRATEKY---DVHSFGVLALEVIK 960
APE+ + M+ E + D+++ G++ E+ +
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKGR G V++ + G AVK F+S+ +E + E E+ +RH NI+ F
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFRE--AEIYQTVMLRHENILGFIA 70
Query: 827 FCSNAQHSF----IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ ++ +VS+Y + GSL L E + + A+ L++LH +
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEI 126
Query: 883 L-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-----GTFGYA 932
+ P I H D+ SKN+L+ ++D G+A + +++ A GT Y
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYM 185
Query: 933 APEI---AHMMRATEKY---DVHSFGVLALEVIK 960
APE+ + M+ E + D+++ G++ E+ +
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKGR G V++ + G AVK F+S+ +E + E E+ +RH NI+ F
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFRE--AEIYQTVMLRHENILGFIA 67
Query: 827 FCSNAQHSF----IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ ++ +VS+Y + GSL L E + + A+ L++LH +
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEI 123
Query: 883 L-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-----GTFGYA 932
+ P I H D+ SKN+L+ ++D G+A + +++ A GT Y
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYM 182
Query: 933 APEI---AHMMRATEKY---DVHSFGVLALEVIK 960
APE+ + M+ E + D+++ G++ E+ +
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHG 826
IGKGR G V++ + G AVK F+S+ +E + E E+ +RH NI+ F
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFRE--AEIYQTVMLRHENILGFIA 103
Query: 827 FCSNAQHSF----IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ ++ +VS+Y + GSL L E + + A+ L++LH +
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEI 159
Query: 883 L-----PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-----GTFGYA 932
+ P I H D+ SKN+L+ ++D G+A + +++ A GT Y
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYM 218
Query: 933 APEI---AHMMRATEKY---DVHSFGVLALEVIK 960
APE+ + M+ E + D+++ G++ E+ +
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 63
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 117
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T T
Sbjct: 118 QGLAFCHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 170
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 16/225 (7%)
Query: 747 GKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEM--ADQ 803
G +E + D GE+ +G G+ V K E +G+ +A K + +
Sbjct: 1 GTVFRQENVDDYYDTGEE--LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSR 58
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQ 863
++ EV L EI+H N+I H N ++ E + G L L + + E +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EE 115
Query: 864 RMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHS 919
+K + N + YLH I H D+ +N++L + + DFG+A ++
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-FG 171
Query: 920 SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + GT + APEI + + D+ S GV+ ++ G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 112
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T
Sbjct: 113 LQGLAFCHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 59
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF------QL 113
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 114 LQGLAFCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 41/237 (17%)
Query: 755 IKAIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL 813
+K D++ K+ IG+G G VY A + + A+KK N +F+++ D L E+ L
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR--MFEDLIDCKRILREITIL 81
Query: 814 TEIRHRNIIKFHGFCS-----NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
++ II+ H +IV E D L + K E ++
Sbjct: 82 NRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTE---QHVKTIL 137
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN------------ 916
+ ++H I+H D+ N LL+ + + DFG+A+ +N
Sbjct: 138 YNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLE 194
Query: 917 ---------PHSSN----WTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
PH+ N T+ T Y APE+ + T D+ S G + E++
Sbjct: 195 EKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 807 LNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRM 865
L EV L ++ H NII+ F+V + + +G L L + E + M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925
+ V AL L+ IVH D+ +N+LLD + ++DFG + L+P
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 183
Query: 926 AGTFGYAAPEIAHMMRAT------EKYDVHSFGVLALEVIKGNHP 964
GT Y APEI ++ D+ S GV+ ++ G+ P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 112
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 113 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 59
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 113
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 114 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 59
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 113
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T T
Sbjct: 114 QGLAFCHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 58
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 112
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T T
Sbjct: 113 QGLAFCHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKG 961
M E D+ S G + E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 33 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L +++ + ++RM+ + + L
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 139
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 198
Query: 938 HMMRATEKYDVHSFGVLALEVIKG 961
M E D+ S G + E+IKG
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 767 IGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNII 822
IG G G+VYKA P SG A+K + ++ E + EV L + H N++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 823 KFHGFCSNAQHS-----FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
+ C+ ++ +V E++D+ L T L D A ++++ L +
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH +C IVH D+ +N+L+ S ++DFG+A+ + + T Y APE+
Sbjct: 128 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALDPVVVTLWYRAPEVL 183
Query: 938 HMMRATEKYDVHSFGVLALEVIK 960
D+ S G + E+ +
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFR 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 112
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 113 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 21/260 (8%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+DF IG+G G V ++ + I+A+K N + + A+ F E L
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEML-KRAETACFREERDVLVNGD 148
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK--DDAAAKEFGWNQRMNVIKGVANAL 875
+ I H + H ++V +Y G L T+L +D ++ ++ + +++
Sbjct: 149 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DSI 207
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-GTFGYAAP 934
LH+ VH DI NVLLD ++DFG +N + ++ A GT Y +P
Sbjct: 208 HQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISP 261
Query: 935 EIAHMMR-ATEKY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
EI M KY D S GV E++ G P Y + ++ + +N +
Sbjct: 262 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF-YAESLVETYGKI---MNHEERFQ 317
Query: 990 LPTPSRDVMDKLMSIMEVAI 1009
P+ DV ++ +++ I
Sbjct: 318 FPSHVTDVSEEAKDLIQRLI 337
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 112
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 113 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 21/260 (8%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
+DF IG+G G V ++ + I+A+K N + + A+ F E L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEML-KRAETACFREERDVLVNGD 132
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK--DDAAAKEFGWNQRMNVIKGVANAL 875
+ I H + H ++V +Y G L T+L +D ++ ++ + +++
Sbjct: 133 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DSI 191
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFA-GTFGYAAP 934
LH+ VH DI NVLLD ++DFG +N + ++ A GT Y +P
Sbjct: 192 HQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISP 245
Query: 935 EIAHMMR-ATEKY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989
EI M KY D S GV E++ G P Y + ++ + +N +
Sbjct: 246 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF-YAESLVETYGKI---MNHEERFQ 301
Query: 990 LPTPSRDVMDKLMSIMEVAI 1009
P+ DV ++ +++ I
Sbjct: 302 FPSHVTDVSEEAKDLIQRLI 321
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 767 IGKGRQGSVY-KAELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALTEIRHRNIIK 823
+GKG G V E +G +A+K +++ DE+A L E L RH +
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSRHPFLTA 215
Query: 824 F-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ F ++ + F++ EY + G L L + + F ++ + +AL YLH +
Sbjct: 216 LKYSFQTHDRLCFVM-EYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSE- 270
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+V+ D+ +N++LD + ++DFG+ K + F GT Y APE+
Sbjct: 271 -KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 329
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
D GV+ E++ G P
Sbjct: 330 GRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 89 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T T Y APE+ + + D+ S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993
GV+ ++ G +P Y + + M T I + P P
Sbjct: 204 GVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMG-QYEFPNP 243
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
+++F +GKG G V E +G +A+K +++ DE+A L E L
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQ 64
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
RH + + F ++ + F++ EY + G L L + + F ++ + +
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE---RVFSEDRARFYGAEIVS 120
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
AL YLH + +V+ D+ +N++LD + ++DFG+ K + F GT Y A
Sbjct: 121 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ D GV+ E++ G P
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
+++F +GKG G V E +G +A+K +++ DE+A L E L
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQ 63
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
RH + + F ++ + F++ EY + G L L + + F ++ + +
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE---RVFSEDRARFYGAEIVS 119
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
AL YLH + +V+ D+ +N++LD + ++DFG+ K + F GT Y A
Sbjct: 120 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ D GV+ E++ G P
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 758 IDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALT 814
+++F +GKG G V E +G +A+K +++ DE+A L E L
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQ 65
Query: 815 EIRHRNIIKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVAN 873
RH + + F ++ + F++ EY + G L L + + F ++ + +
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE---RVFSEDRARFYGAEIVS 121
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
AL YLH + +V+ D+ +N++LD + ++DFG+ K + F GT Y A
Sbjct: 122 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
PE+ D GV+ E++ G P
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound To
The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E+ L ++ H IIK F +A+ +IV E ++ G L + + KE
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY- 127
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHSSNWTA 924
+ A+ YLH + I+H D+ +NVLL S+ E ++DFG +K L +S
Sbjct: 128 --QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRT 181
Query: 925 FAGTFGYAAPEI------AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978
GT Y APE+ A RA D S GV+ + G P T S +
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYPPFSEHRTQV-SLKDQ 237
Query: 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
IT N +P +V +K + +++ LV P+AR T ++
Sbjct: 238 ITSGKYNF---IPEVWAEVSEKALDLVKK---LLVVDPKARFTTEEA 278
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEI 816
D GE+ +G G+ V K E +G+ +A K K ++E EV L ++
Sbjct: 15 DIGEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV 72
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H N+I H N ++ E + G L L A + + + IK + + ++
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVN 129
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
YLH I H D+ +N++L ++ + DFG+A + + F FG
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTP 182
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ APEI + + D+ S GV+ ++ G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 60
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 114
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 115 LQGLAFCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 22/196 (11%)
Query: 785 IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRG 844
+ AVK DE + E++ +RH NI++F H I+ EY G
Sbjct: 47 LVAVKYIERGAAIDENVQR-----EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG 101
Query: 845 SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904
L + A F ++ + + + +SY H I H D+ +N LLD
Sbjct: 102 ELYERI---CNAGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAP 155
Query: 905 H--VSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKY-DVHSFGVLALEVIKG 961
+ DFG +K HS + GT Y APE+ K DV S GV ++ G
Sbjct: 156 RLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
Query: 962 NH-------PRDYVST 970
+ PRDY T
Sbjct: 215 AYPFEDPEEPRDYRKT 230
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 37/277 (13%)
Query: 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
DD +G+G G V K +PSG I AVK+ + + +Q L ++ +I
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV---NSQEQKRLLXDL----DIS 86
Query: 818 HRNI-----IKFHGFCSNAQHSFIVSEY----LDRGSLTTILKDDAAAKEFGWNQRMNVI 868
R + + F+G +I E LD+ I K ++ ++++
Sbjct: 87 XRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 146
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
K AL +LH ++H D+ NVL+++ + DFGI+ +L + AG
Sbjct: 147 K----ALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK-DIDAGC 199
Query: 929 FGYAAPEIAHMMRATEKY----DVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ 984
Y APE + + Y D+ S G+ +E+ P D T F ++ E
Sbjct: 200 KPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE--- 256
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
P+P ++ CL ++ + RPT
Sbjct: 257 ------PSPQLPADKFSAEFVDFTSQCLKKNSKERPT 287
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFAVK--KFNSQLLFDEMADQDEFLNEVLALTEI 816
D GE+ +G G+ V K E +G+ +A K K ++E EV L ++
Sbjct: 15 DIGEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV 72
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
H N+I H N ++ E + G L L A + + + IK + + ++
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVN 129
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAGTFG-- 930
YLH I H D+ +N++L ++ + DFG+A + + F FG
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTP 182
Query: 931 -YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ APEI + + D+ S GV+ ++ G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 59
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 113
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 114 LQGLAFCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 58
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 112
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ + T
Sbjct: 113 QGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 165
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 767 IGKGRQGSVY-KAELPSGIIFAVKKFNSQLLF--DEMADQDEFLNEVLALTEIRHRNIIK 823
+GKG G V E +G +A+K +++ DE+A L E L RH +
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSRHPFLTA 212
Query: 824 F-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC 882
+ F ++ + F++ EY + G L L + + F ++ + +AL YLH +
Sbjct: 213 LKYSFQTHDRLCFVM-EYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSE- 267
Query: 883 LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+V+ D+ +N++LD + ++DFG+ K + F GT Y APE+
Sbjct: 268 -KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 326
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
D GV+ E++ G P
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLP 348
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
++++F + IG+G G VYKA +G + A+KK +L + + E+ L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNV 867
+ H NI+K ++V E+L D +LT I + F +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QL 112
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG 927
++G+A S+ ++H D+ +N+L+++E ++DFG+A+ +
Sbjct: 113 LQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 928 TFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
T Y APEI + + D+ S G + E++
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%)
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q I A +S L H I++ D+ +NVLLD + +SD G+A L +
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+AGT G+ APE+ D + GV E+I P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%)
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q I A +S L H I++ D+ +NVLLD + +SD G+A L +
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+AGT G+ APE+ D + GV E+I P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 59
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVIK 869
H NI+K ++V E+L D +LT I + F +++
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLLQ 113
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T T
Sbjct: 114 GLAFCHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 930 GYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%)
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q I A +S L H I++ D+ +NVLLD + +SD G+A L +
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+AGT G+ APE+ D + GV E+I P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 800 MADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858
+ +++ ++E+ L+ + H NI+ G C+ + +++EY G L L+ +
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS-- 147
Query: 859 FGWNQRMNVIKG-----------------VANALSYL-HHDCLPPIVHGDISSKNVLLDS 900
F ++ I VA +++L +C +H D++++N+LL
Sbjct: 148 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTH 203
Query: 901 EHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALE 957
+ DFG+A+ + + SN+ + APE T + DV S+G+ E
Sbjct: 204 GRITKICDFGLARHIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 262
Query: 958 VIK-GNHPRDYVSTNFSSFSNMITEINQNLD-HRLPTPSRDVMDKLMSIMEVAILCLVES 1015
+ G+ P + + S F MI E + L P D+M C
Sbjct: 263 LFSLGSSPYPGMPVD-SKFYKMIKEGFRMLSPEHAPAEMYDIMKT----------CWDAD 311
Query: 1016 PEARPTMKKVCNLLCK 1031
P RPT K++ L+ K
Sbjct: 312 PLKRPTFKQIVQLIEK 327
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%)
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW 922
Q I A +S L H I++ D+ +NVLLD + +SD G+A L +
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 923 TAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+AGT G+ APE+ D + GV E+I P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 809 EVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVI 868
E++ +RH NI++F H IV EY G L + A F ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL---FERICNAGRFSEDEARFFF 121
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH--VSDFGIAKFLNPHSSNWTAFA 926
+ + + +SY H + H D+ +N LLD ++DFG +K HS +A
Sbjct: 122 QQLISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-V 177
Query: 927 GTFGYAAPEIAHMMRATEKY-DVHSFGVLALEVIKGNHP 964
GT Y APE+ K DV S GV ++ G +P
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 58
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 112
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ + T
Sbjct: 113 QGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 165
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 41/219 (18%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF-- 824
IGKGR G V+ + G AVK F + +E + E E+ +RH NI+ F
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTT---EEASWFRE--TEIYQTVLMRHENILGFIA 98
Query: 825 ---HGFCSNAQHSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHH 880
G S Q +++++Y + GSL LK AK + + + L +LH
Sbjct: 99 ADIKGTGSWTQ-LYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHT 152
Query: 881 DCL-----PPIVHGDISSKNVLLDSEHEAHVSDFGIA-KFLN-------PHSSNWTAFAG 927
+ P I H D+ SKN+L+ ++D G+A KF++ P ++ G
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR----VG 208
Query: 928 TFGYAAPEI------AHMMRATEKYDVHSFGVLALEVIK 960
T Y PE+ + ++ D++SFG++ EV +
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVAR 247
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 24/318 (7%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
LDL +N++ F++ L + L N +S P NL L LGL N+L +I
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LI 95
Query: 334 PPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVL 393
P + F G L +L+KL++ N + ++ + +L L
Sbjct: 96 PLGV---------------FTG--------LSNLTKLDISENKIVILLDYMFQDLYNLKS 132
Query: 394 VNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEI 453
+ + +N L + ++F L SLE+L + NL EA L L L N+
Sbjct: 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192
Query: 454 SFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNK 513
++++ +L S ++ P L L ++ ++ + L L
Sbjct: 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRF 252
Query: 514 LILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKI 573
L L+ N +S L LQ + L +L+ P + L+ L LN+S NQ
Sbjct: 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLE 312
Query: 574 PTEFEKLIHLSELDLSHN 591
+ F + +L L L N
Sbjct: 313 ESVFHSVGNLETLILDSN 330
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 128/298 (42%)
Query: 249 ILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGS 308
+L L KN + + L EL+L+EN + P +F+NL +L + L +N L
Sbjct: 36 LLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLI 95
Query: 309 IPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLS 368
L L++L + N++ ++ +L +L++L + DN + L SL
Sbjct: 96 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155
Query: 369 KLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGK 428
+L L + +L+ + ++ +L L+++ + ++ + SF+ L L+ L +
Sbjct: 156 QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215
Query: 429 VYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQ 488
+ NLT L ++ NL R+ L N S N I + + +LQ
Sbjct: 216 MTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ 275
Query: 489 VLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
+ L + P F L L L ++ NQL+ F S+ L+ L L +N L+
Sbjct: 276 EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 128/336 (38%), Gaps = 50/336 (14%)
Query: 91 TFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQ-----------LSG 139
T F+SFPHL L L+ N++ P +NL LR L L +N+ LS
Sbjct: 46 TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSN 105
Query: 140 VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXX 199
+ +I + +L + L+ LE+G L+ + H FSG
Sbjct: 106 LTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYI---SHRAFSG---------LNS 153
Query: 200 XXXXXXXXXXFGSIPN-VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYL-YKNSL 257
SIP + +L+ L +L L + +S L L +L + + L
Sbjct: 154 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 213
Query: 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLE 317
P+ + L +L L ++ L L+ +L L ++L N +S L
Sbjct: 214 DTMTPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL 272
Query: 318 ALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL 377
L E+ L QL V P + L+ LR L + N L+ LE
Sbjct: 273 RLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN--------------QLTTLE------ 312
Query: 378 SGVIPHSIGNLTKLVLVN---MCENHLFGLIPKSFR 410
+ HS+GNL L+L + C+ L + + +R
Sbjct: 313 -ESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWR 347
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 130/337 (38%), Gaps = 32/337 (9%)
Query: 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184
++ R LDLG N++ + E L L + N + P L + L L N
Sbjct: 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91
Query: 185 FSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANL 244
IP LG V L++L+ LD+S+N++ + + +L
Sbjct: 92 LK-LIP--LG---------------------VFTGLSNLTKLDISENKIVILLDYMFQDL 127
Query: 245 SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNN 303
NL L + N L L SL +L L + L SIP + S+L L ++ L +
Sbjct: 128 YNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL-TSIPTEALSHLHGLIVLRLRHL 186
Query: 304 SLSGSIPPTQGNLEALSELGL-YINQLDGVIPPSIG--NLSSLRTLYLYDNGFYGLVPNE 360
+++ + L L L + + LD + P + NL+SL + L
Sbjct: 187 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRH 246
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
+ YL+ L+ L N +S + + L +L + + L + P +FR L L L
Sbjct: 247 LVYLRFLN---LSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 303
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
+ N L F NL L L N L + W
Sbjct: 304 SGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLW 340
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+KK +L + + E+ L E+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL 60
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 114
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ + T
Sbjct: 115 QGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 12/235 (5%)
Query: 293 SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD--GVIPPSIGNLSSLRTLYLYD 350
SS T + L +N L L L++L L N L G S +SL+ L L
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87
Query: 351 NGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG-NLTKLVLVNMCENHLFGLIPKSF 409
NG + N +G L+ L L+ ++L + S+ +L L+ +++ H F
Sbjct: 88 NGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146
Query: 410 RNLTSLERLRFNQNNLFGKVY--EAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFN 467
L+SLE L+ N+ F + + + F + NLTFLDLSQ L + + L N
Sbjct: 147 NGLSSLEVLKMAGNS-FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205
Query: 468 ASMNNIYG--SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
S NN + + P + +S LQVLD S NHI+ + + F + LNL Q
Sbjct: 206 MSHNNFFSLDTFPYKCLNS--LQVLDYSLNHIMTSKKQELQH-FPSSLAFLNLTQ 257
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGS-IPPTQGNLEALSE 321
SV +L++L LD+S + F+ LSSL ++ + NS + +P L L+
Sbjct: 120 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 179
Query: 322 LGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV- 380
L L QL+ + P + +LSSL+ L + N F+ L L SL L+ NH+
Sbjct: 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 239
Query: 381 ------IPHSIG--NLTKLVLVNMCENHLFGLIPKSFRN-LTSLERLR 419
P S+ NLT+ CE+ F K R L +ER+
Sbjct: 240 KQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERME 287
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 30/210 (14%)
Query: 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLR-MLYFDVNHL 161
L YL+LS N + + L +L LD ++ L + E LR ++Y D++H
Sbjct: 80 LKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQM--SEFSVFLSLRNLIYLDISHT 136
Query: 162 HGSIPLE--IGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGN 219
H + LS + VL + N+F +P++
Sbjct: 137 HTRVAFNGIFNGLSSLEVLKMAGNSFQENF-----------------------LPDIFTE 173
Query: 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279
L +L+ LDLSQ QL P + +LS+L +L + N+ F L SL LD S N
Sbjct: 174 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 233
Query: 280 QLFGSIPLSFSNL-SSLTLMSLFNNSLSGS 308
+ S + SSL ++L N + +
Sbjct: 234 HIMTSKKQELQHFPSSLAFLNLTQNDFACT 263
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 93/244 (38%), Gaps = 55/244 (22%)
Query: 331 GVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS--GVIPHSIGNL 388
G+ G SS L L N L L L+KL L N LS G S
Sbjct: 18 GLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGT 77
Query: 389 TKLVLVNMCENHLFGLIPKS--FRNLTSLERLRFNQNNLFG-KVYEAFGDHPNLTFLDLS 445
T L +++ N G+I S F L LE L F +NL + F NL +LD+S
Sbjct: 78 TSLKYLDLSFN---GVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 134
Query: 446 QNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQF 505
+ ++FN G FN S L+VL ++ N F
Sbjct: 135 HT--HTRVAFN-------GIFNGL---------------SSLEVLKMAGN--------SF 162
Query: 506 EKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLS 565
++ F +P F L L +LDLS +L P + +LS L LN+S
Sbjct: 163 QENF---------------LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207
Query: 566 NNQF 569
+N F
Sbjct: 208 HNNF 211
Score = 33.5 bits (75), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 14/232 (6%)
Query: 273 ELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSLS--GSIPPTQGNLEALSELGLYINQL 329
L+L N+L S+P F L+ LT +SL +N LS G + +L L L N
Sbjct: 32 RLELESNKL-QSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN-- 88
Query: 330 DGVIPPSIGNLSSLRTLYLYDNGFYGLVP-NEIGY---LKSLSKLELCRNHLSGVIPHSI 385
GVI S N L L D L +E L++L L++ H
Sbjct: 89 -GVITMS-SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146
Query: 386 GNLTKLVLVNMCENHLF-GLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDL 444
L+ L ++ M N +P F L +L L +Q L AF +L L++
Sbjct: 147 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206
Query: 445 SQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGD-SSKLQVLDLSSN 495
S NN + +F ++ L + S+N+I S E+ S L L+L+ N
Sbjct: 207 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 258
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 34 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L +++ + ++RM+ + + L
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 140
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S F T Y APE+
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMVPFVVTRYYRAPEVI 199
Query: 938 HMMRATEKYDVHSFGVLALEVIKG 961
M E D+ S G + E+IKG
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 803 QDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
+++ EV L EI+H N+I H N ++ E + G L L + + E
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---E 114
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPH 918
+ +K + N + YLH I H D+ +N++L + + DFG+A ++
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-F 170
Query: 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ + GT + APEI + + D+ S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKK----FNSQLLFDEMADQDEFLNEVLALTEIRHRNI 821
+G G G+V A + +G A+KK F S+L F + A E+ L +RH N+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-FAKRA-----YRELRLLKHMRHENV 86
Query: 822 IKF-HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH 880
I F + YL + T L ++ G ++ ++ + L Y+H
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH- 145
Query: 881 DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHM 939
I+H D+ N+ ++ + E + DFG+A+ + S T Y APE I +
Sbjct: 146 --AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD---SEMXGXVVTRWYRAPEVILNW 200
Query: 940 MRATEKYDVHSFGVLALEVIKGN 962
MR T+ D+ S G + E+I G
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 105 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 160
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T + Y APE+ + + D+ S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 219
Query: 952 GVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
GV+ ++ G +P Y + + M T I + P P
Sbjct: 220 GVIMYILLCG-YPPFYSNHGLAISPGMKTRIRMG-QYEFPNPE 260
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 97 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 152
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T + Y APE+ + + D+ S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 211
Query: 952 GVLALEVIKGNHP 964
GV+ ++ G P
Sbjct: 212 GVIMYILLCGYPP 224
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 118/295 (40%), Gaps = 51/295 (17%)
Query: 767 IGKGRQGSVYKA------ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHR 819
+G G G V +A + + + AVK + +++ ++E+ L+ + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHM 87
Query: 820 NIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG--------- 870
NI+ G C+ + +++EY G L L+ + F ++ I
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS--FICSKTSPAIMEDDELALDLE 145
Query: 871 --------VANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN 921
VA +++L +C +H D++++N+LL + DFG+A+ + + SN
Sbjct: 146 DLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIK-NDSN 200
Query: 922 WTAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN 977
+ + APE T + DV S+G+ E+ G+ P + + S F
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-SKFYK 259
Query: 978 MITEINQNLD-HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031
MI E + L P D+M C P RPT K++ L+ K
Sbjct: 260 MIKEGFRMLSPEHAPAEMYDIMKT----------CWDADPLKRPTFKQIVQLIEK 304
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 800 MADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858
+ +++ ++E+ L+ + H NI+ G C+ + +++EY G L L+ +
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS-- 147
Query: 859 FGWNQRMNVIKG-----------------VANALSYL-HHDCLPPIVHGDISSKNVLLDS 900
F ++ I VA +++L +C +H D++++N+LL
Sbjct: 148 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTH 203
Query: 901 EHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALE 957
+ DFG+A+ + + SN+ + APE T + DV S+G+ E
Sbjct: 204 GRITKICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 262
Query: 958 VIK-GNHPRDYVSTNFSSFSNMITEINQNLD-HRLPTPSRDVMDKLMSIMEVAILCLVES 1015
+ G+ P + + S F MI E + L P D+M C
Sbjct: 263 LFSLGSSPYPGMPVD-SKFYKMIKEGFRMLSPEHAPAEMYDIMKT----------CWDAD 311
Query: 1016 PEARPTMKKVCNLLCK 1031
P RPT K++ L+ K
Sbjct: 312 PLKRPTFKQIVQLIEK 327
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 756 KAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALT 814
+ + DF C+G+G G V++A+ +A+K+ +L E+A +++ + EV AL
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELA-REKVMREVKALA 58
Query: 815 EIRHRNIIKFHGF------------CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWN 862
++ H I+++ S + +I + + +L + +E +
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 863 QRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN------ 916
+++ +A A+ +LH L +H D+ N+ + V DFG+ ++
Sbjct: 119 VCLHIFLQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 917 ------PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVI 959
P + T GT Y +PE H + K D+ S G++ E++
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 800 MADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858
+ +++ ++E+ L+ + H NI+ G C+ + +++EY G L L+ +
Sbjct: 85 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS-- 142
Query: 859 FGWNQRMNVIKG-----------------VANALSYL-HHDCLPPIVHGDISSKNVLLDS 900
F ++ I VA +++L +C +H D++++N+LL
Sbjct: 143 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTH 198
Query: 901 EHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALE 957
+ DFG+A+ + + SN+ + APE T + DV S+G+ E
Sbjct: 199 GRITKICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 257
Query: 958 VIK-GNHPRDYVSTNFSSFSNMITEINQNLD-HRLPTPSRDVMDKLMSIMEVAILCLVES 1015
+ G+ P + + S F MI E + L P D+M C
Sbjct: 258 LFSLGSSPYPGMPVD-SKFYKMIKEGFRMLSPEHAPAEMYDIMKT----------CWDAD 306
Query: 1016 PEARPTMKKVCNLLCK 1031
P RPT K++ L+ K
Sbjct: 307 PLKRPTFKQIVQLIEK 322
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine
Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 44/277 (15%)
Query: 767 IGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+GKG GSV +A+L S + AVK + ++ +D +EFL E + E H ++
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS--SDIEEFLREAACMKEFDHPHVA 88
Query: 823 KFHGFCSNAQHS------FIVSEYLDRGSLTTILKDDAAAKEFGWN-------QRMNVIK 869
K G ++ ++ ++ G L L A G N + +
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL----LASRIGENPFNLPLQTLVRFMV 144
Query: 870 GVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTF 929
+A + YL +H D++++N +L + V+DFG+++ + +S ++
Sbjct: 145 DIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKI--YSGDYYRQGCAS 199
Query: 930 GYAAPEIAHMMRATEKYDVHS----FGVLALEVI-KGNHPRDYVSTNFSSFSNMITEINQ 984
+A A Y VHS FGV E++ +G P Y + N + N
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP--YAGIENAEIYNYLIGGN- 256
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPT 1021
RL P + M+++ +M C P+ RP+
Sbjct: 257 ----RLKQPP-ECMEEVYDLM---YQCWSADPKQRPS 285
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 804 DEFLNEVLALTEIRHRNIIKFHGFCS--NAQHSFIVSEYLDRGSLTTI-----LKDDAAA 856
++ E+ L ++ H N++K N H ++V E +++G + + L +D A
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 857 KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916
F ++IKG+ YLH+ I+H DI N+L+ + ++DFG++
Sbjct: 141 FYF-----QDLIKGI----EYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 917 PHSSNWTAFAGTFGYAAPEIAHMMR---ATEKYDVHSFGVLALEVIKGNHP 964
+ + GT + APE R + + DV + GV + G P
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 135 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 190
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T T Y APE+ + + D+ S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 952 GVLALEVIKGNHP 964
GV+ ++ G P
Sbjct: 250 GVIMYILLCGYPP 262
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 760 DFGEKYCIGKGRQGSVYKA-ELPSGIIFA---VKKFNSQLLFDEMADQDEFLNEVLALTE 815
D GE+ +G G+ V K E +G+ +A +KK S+ + ++E EV L +
Sbjct: 15 DIGEE--LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVC-REEIEREVSILRQ 71
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+ H NII H N ++ E + G L L A + + + IK + + +
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGV 128
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGIAKFLNPHSSNWTAFAGTFG- 930
+YLH I H D+ +N++L ++ + DFG+A + + F FG
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGT 181
Query: 931 --YAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ APEI + + D+ S GV+ ++ G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 141 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 196
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T T Y APE+ + + D+ S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 952 GVLALEVIKGNHP 964
GV+ ++ G P
Sbjct: 256 GVIMYILLCGYPP 268
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 25/238 (10%)
Query: 736 PFGFSSVLNFNGKFLYEEIIKAIDDFGEKYC----IGKGRQGSVYKA-ELPSGIIFAVKK 790
P G S++ G F +++ K + + Y +G G GSV A + SG A+KK
Sbjct: 16 PRGSMSLIRKKG-FYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKK 74
Query: 791 FNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ-----HSFIVSEYLDRGS 845
+ + A + E+L L ++H N+I + A + F + +
Sbjct: 75 LSRPFQSEIFAKRA--YRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD 132
Query: 846 LTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH 905
L I+ EF + ++ + L Y+H +VH D+ N+ ++ + E
Sbjct: 133 LQKIM-----GMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELK 184
Query: 906 VSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRATEKYDVHSFGVLALEVIKGN 962
+ DFG+A+ + + T + T Y APE I M + D+ S G + E++ G
Sbjct: 185 ILDFGLARHAD---AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 492 LSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPK 551
+SS+ + G++P L KL L NQL+G P F + +Q L L NK+ K
Sbjct: 44 ISSDGLFGRLP-------HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNK 96
Query: 552 SMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L +L LNL +NQ + +P FE L L+ L+L+ N
Sbjct: 97 MFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 252 LYKNSLFGFIPS--VIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSI 309
L ++ G I S + G L L +L+L NQL G P +F S + + L N +
Sbjct: 35 LLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEIS 94
Query: 310 PPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGF 353
L L L LY NQ+ V+P S +L+SL +L L N F
Sbjct: 95 NKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 469 SMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE 528
S + ++G +P L L+L N + G P FE + +L L N++
Sbjct: 45 SSDGLFGRLP-------HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKM 97
Query: 529 FGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
F L +L+ L+L N++S +P S +L+ L LNL++N FN
Sbjct: 98 FLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ G L L L+L +NQL G P + S++ L L +N + + L L L+
Sbjct: 49 LFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNN 303
L +NQ+ +P SF +L+SLT ++L +N
Sbjct: 109 LYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
+S + LFG +P L + L N L+G P + EL L N++ +
Sbjct: 44 ISSDGLFGRLP-------HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNK 96
Query: 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN 375
L L+TL LYDN ++P +L SL+ L L N
Sbjct: 97 MFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 362 GYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421
G L L KLEL RN L+G+ P++ + + + + EN + + K F L L+ L
Sbjct: 51 GRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLY 110
Query: 422 QNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
N + + +F +LT L+L+ N W
Sbjct: 111 DNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 146
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%)
Query: 94 DFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRM 153
D F PHL+ L L N L G P S ++ L LG N++ + + L L+
Sbjct: 47 DGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKT 106
Query: 154 LYFDVNHLHGSIPLEIGKLSLINVLTLCHNNF 185
L N + +P L+ + L L N F
Sbjct: 107 LNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 800 MADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKE 858
+ +++ ++E+ L+ + H NI+ G C+ + +++EY G L L+ +
Sbjct: 83 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS-- 140
Query: 859 FGWNQRMNVIKG-----------------VANALSYL-HHDCLPPIVHGDISSKNVLLDS 900
F ++ I VA +++L +C +H D++++N+LL
Sbjct: 141 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTH 196
Query: 901 EHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRATEKYDVHSFGVLALE 957
+ DFG+A+ + + SN+ + APE T + DV S+G+ E
Sbjct: 197 GRITKICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 255
Query: 958 VIK-GNHPRDYVSTNFSSFSNMITEINQNLD-HRLPTPSRDVMDKLMSIMEVAILCLVES 1015
+ G+ P + + S F MI E + L P D+M C
Sbjct: 256 LFSLGSSPYPGMPVD-SKFYKMIKEGFRMLSPEHAPAEMYDIMKT----------CWDAD 304
Query: 1016 PEARPTMKKVCNLLCK 1031
P RPT K++ L+ K
Sbjct: 305 PLKRPTFKQIVQLIEK 320
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 32/270 (11%)
Query: 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEV 810
+E+ DDF IG+G V ++ +G ++A+K N + + + F E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML-KRGEVSCFREER 112
Query: 811 LALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTIL-----KDDAAAKEFGWNQRM 865
L R I + H + + ++V EY G L T+L + A F + +
Sbjct: 113 DVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIV 172
Query: 866 NVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAF 925
I V + L Y VH DI N+LLD ++DFG L + +
Sbjct: 173 MAIDSV-HRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLV 222
Query: 926 A-GTFGYAAPEIAHMMRATE-------KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSN 977
A GT Y +PEI + + D + GV A E+ G P + + + +
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP--FYADSTAETYG 280
Query: 978 MITEINQNL-----DHRLPTPSRDVMDKLM 1002
I ++L D +P +RD + +L+
Sbjct: 281 KIVHYKEHLSLPLVDEGVPEEARDFIQRLL 310
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANK 544
S+LQ LDLS I + L L+ LIL N + P F LT L+ L K
Sbjct: 51 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 110
Query: 545 LSSSIPKSMGNLSKLHYLNLSNNQFNH--KIPTEFEKLIHLSELDLSHNFLQ 594
L+S +G L L LN+++N F H K+P F L +L +DLS+N++Q
Sbjct: 111 LASLESFPIGQLITLKKLNVAHN-FIHSCKLPAYFSNLTNLVHVDLSYNYIQ 161
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 54/147 (36%), Gaps = 47/147 (31%)
Query: 529 FGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE---------- 578
F + +ELQ+LDLS ++ + K+ L L L L+ N P F
Sbjct: 47 FSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 106
Query: 579 --------------KLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGC 624
+LI L +L+++HNF+ C +P
Sbjct: 107 VETKLASLESFPIGQLITLKKLNVAHNFIHS------CK-----------------LPAY 143
Query: 625 FEEMRSLSRIDIAYNELQGPIPNSTAF 651
F + +L +D++YN +Q N F
Sbjct: 144 FSNLTNLVHVDLSYNYIQTITVNDLQF 170
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 98/255 (38%), Gaps = 31/255 (12%)
Query: 307 GSIPPTQGNLEALSELGLYINQLD--GVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364
GSI + L +LS L L N L G S +SLR L L NG + N +G L
Sbjct: 335 GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMG-L 393
Query: 365 KSLSKLELCRNHLSGVIPHS-IGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
+ L L+ + L V S +L KL+ +++ + F LTSL L+ N
Sbjct: 394 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGN 453
Query: 424 NLFGKVYE-AFGDHPNLTFLDL------------------------SQNNLYGEISFNWR 458
+ F + NLTFLDL S NNL S ++
Sbjct: 454 SFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN 513
Query: 459 NFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ--FEKLFSLNKLIL 516
L T + S N I S L +L++N + Q + + + ++
Sbjct: 514 QLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLV 573
Query: 517 NLNQLSGGVPLEFGS 531
N+ Q++ P+E +
Sbjct: 574 NVEQMTCATPVEMNT 588
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE-FGSLTELQYLDLSANK 544
KL LD+S + F L SLN L + N F + T L +LDLS +
Sbjct: 420 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQ 479
Query: 545 LSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
L L +L LN+S+N + + +L LS LD S N ++
Sbjct: 480 LEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 529
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
IV E LD G L + ++D + F + ++K + A+ YLH I H D+ +
Sbjct: 91 LIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 895 NVLLDSEHEAHV---SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSF 951
N+L S+ + +DFG AK H+S T T Y APE+ + + D+ S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 952 GVLALEVIKGNHP 964
GV+ ++ G P
Sbjct: 206 GVIMYILLCGYPP 218
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANK 544
S+LQ LDLS I + L L+ LIL N + P F LT L+ L K
Sbjct: 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 115
Query: 545 LSSSIPKSMGNLSKLHYLNLSNNQFNH--KIPTEFEKLIHLSELDLSHNFLQ 594
L+S +G L L LN+++N F H K+P F L +L +DLS+N++Q
Sbjct: 116 LASLESFPIGQLITLKKLNVAHN-FIHSCKLPAYFSNLTNLVHVDLSYNYIQ 166
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE-FGSLTELQYLDLSANK 544
KL LD+S + F L SLN L + N F + T L +LDLS +
Sbjct: 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQ 484
Query: 545 LSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594
L L +L LN+S+N + + +L LS LD S N ++
Sbjct: 485 LEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 98/255 (38%), Gaps = 31/255 (12%)
Query: 307 GSIPPTQGNLEALSELGLYINQLD--GVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364
GSI + L +LS L L N L G S +SLR L L NG + N +G L
Sbjct: 340 GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMG-L 398
Query: 365 KSLSKLELCRNHLSGVIPHS-IGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
+ L L+ + L V S +L KL+ +++ + F LTSL L+ N
Sbjct: 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGN 458
Query: 424 NLFGKVYE-AFGDHPNLTFLDL------------------------SQNNLYGEISFNWR 458
+ F + NLTFLDL S NNL S ++
Sbjct: 459 SFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN 518
Query: 459 NFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ--FEKLFSLNKLIL 516
L T + S N I S L +L++N + Q + + + ++
Sbjct: 519 QLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLV 578
Query: 517 NLNQLSGGVPLEFGS 531
N+ Q++ P+E +
Sbjct: 579 NVEQMTCATPVEMNT 593
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 26/214 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN---HPRDYV 968
M E D+ S G + E+++ RDY+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 12/153 (7%)
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+H NII + ++ ++V+E + G L IL+ K F + V+ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ----KFFSEREASAVLFTITKTV 129
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSE----HEAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
YLH +VH D+ N+L E + DFG AK L + T +
Sbjct: 130 EYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANF 186
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ D+ S GVL ++ G P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 759 DDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR 817
D++ K+ IG+G G VY A + + A+KK N +F+++ D L E+ L ++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR--MFEDLIDCKRILREITILNRLK 83
Query: 818 HRNIIKFHGFCS-----NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVA 872
II+ + +IV E D L + K E ++ +
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTE---EHIKTILYNLL 139
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN---------------- 916
+++H I+H D+ N LL+ + V DFG+A+ +N
Sbjct: 140 LGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 917 --PHSSN----WTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
PH+ N T+ T Y APE+ + T+ D+ S G + E++
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN--HP-RDYVS 969
M E D+ S G + E+++ P RDY+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 395 NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEIS 454
++ ++ +F L+ F + T LE+L QN + AF +L L+LSQN L
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL----- 335
Query: 455 FNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQFEKLFSLNK 513
GSI + ++ KL+VLDLS NHI F L +L +
Sbjct: 336 --------------------GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKE 375
Query: 514 LILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPK 551
L L+ NQL F LT LQ + L N S P+
Sbjct: 376 LALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
S ++T L + + L+ + + L +L L +N ++ + ++ LT L+ +N+ +N
Sbjct: 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNF 334
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
L + + F NL LE L + N++ ++F PNL L L N L
Sbjct: 335 LGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQL 383
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 227 DLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIP 286
DLS++++ + ++ ++L L L +N + + L L +L+LS+N L
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS 340
Query: 287 LSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTL 346
F NL L ++ L N + + L L EL L NQL V L+SL+ +
Sbjct: 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKI 400
Query: 347 YLYDNGFYGLVPNEIGYL 364
+L+ N + P I YL
Sbjct: 401 WLHTNPWDCSCP-RIDYL 417
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 94 DFSFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQEIGHLTCLR 152
D +F HL+ LNLS N L G+I ++ NL KL LDL N + + Q L L+
Sbjct: 316 DNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLK 374
Query: 153 MLYFDVNHLHGSIP 166
L D N L S+P
Sbjct: 375 ELALDTNQLK-SVP 387
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 38/289 (13%)
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGN----LTKLVLVN 395
LSSL L L N F L L +L L L + +L G + GN LT L ++
Sbjct: 78 LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLS--GNFFKPLTSLEMLV 135
Query: 396 MCENHLFGLIPKSF-RNLTSLERLRFNQNNLFGKVYEAF----GDHPNLTFLDLSQNNLY 450
+ +N++ + P SF N+ L N + E G H T L LS L
Sbjct: 136 LRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKH--FTLLRLSSITLQ 193
Query: 451 GEISFNWRNFPKLG---------TFNASMNNIYGSIPPEIGDS---SKLQVLDLSSNHIV 498
+++ W + K G T + S N S+ D+ +K+Q L LS+++ +
Sbjct: 194 -DMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNM 252
Query: 499 G--------KIPVQFE----KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
G K P F + + L+ +++ + F T+L+ L L+ N+++
Sbjct: 253 GSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN 312
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQG 595
+ L+ L LNLS N FE L L LDLS+N ++
Sbjct: 313 KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 130/337 (38%), Gaps = 38/337 (11%)
Query: 288 SFSNLSSLTLMSL-FNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN----LSS 342
+F LSSL ++ L +N L G L L L L LDG + GN L+S
Sbjct: 74 TFRGLSSLIILKLDYNQFLQLETGAFNG-LANLEVLTLTQCNLDGAVLS--GNFFKPLTS 130
Query: 343 LRTLYLYDNGFYGLVPNEIGY-LKSLSKLELCRNHLSGVIPHSIGN----------LTKL 391
L L L DN + P ++ L+L N + + + N L+ +
Sbjct: 131 LEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSI 190
Query: 392 VLVNMCENHL-FGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDH---PNLTFLDLSQN 447
L +M E L + F+N TS+ L + N + + F D + L LS +
Sbjct: 191 TLQDMNEYWLGWEKCGNPFKN-TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS 249
Query: 448 NLYGEISFNWRNFPK-------------LGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
G SF NF + T + S + I+ + + L+ L L+
Sbjct: 250 YNMGS-SFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQ 308
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMG 554
N I F L L KL L+ N L F +L +L+ LDLS N + + +S
Sbjct: 309 NEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL 368
Query: 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
L L L L NQ F++L L ++ L N
Sbjct: 369 GLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 210 FGSIPNVM-GNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNL 268
GSI + M NL+ L +LDLS N +R S L NL L L N L + L
Sbjct: 335 LGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRL 394
Query: 269 KSLFELDLSENQLFGSIP 286
SL ++ L N S P
Sbjct: 395 TSLQKIWLHTNPWDCSCP 412
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 127/290 (43%), Gaps = 43/290 (14%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYL-YKNSLFGFIPSVIGNLKSLFE 273
N + N++S S++ ++ +++ FS N G +L N FG P++ LKSL
Sbjct: 279 NCLTNVSSFSLVSVTIERVKD---FSY----NFGWQHLELVNCKFGQFPTL--KLKSLKR 329
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L + N+ G S +L SL + L N LS G
Sbjct: 330 LTFTSNK--GGNAFSEVDLPSLEFLDLSRNGLS----------------------FKGCC 365
Query: 334 PPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG-NLTKLV 392
S +SL+ L L NG + N +G L+ L L+ ++L + S+ +L L+
Sbjct: 366 SQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVY--EAFGDHPNLTFLDLSQNNLY 450
+++ H F L+SLE L+ N+ F + + + F + NLTFLDLSQ L
Sbjct: 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS-FQENFLPDIFTELRNLTFLDLSQCQLE 483
Query: 451 GEISFNWRNFPKLGTFNASMNNIYG--SIPPEIGDSSKLQVLDLSSNHIV 498
+ + L N S NN + + P + +S LQVLD S NHI+
Sbjct: 484 QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS--LQVLDYSLNHIM 531
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 79/198 (39%), Gaps = 37/198 (18%)
Query: 402 FGLIPKSFRNLTSLERLRFNQN---NLFGKVYEAFGDHPNLTFLDLSQNNL--------- 449
FG P L SL+RL F N N F +V D P+L FLDLS+N L
Sbjct: 316 FGQFPT--LKLKSLKRLTFTSNKGGNAFSEV-----DLPSLEFLDLSRNGLSFKGCCSQS 368
Query: 450 -YGEISFNWRNFPKLGTFNASMN----------NIYGSIPPEIGDSS------KLQVLDL 492
+G S + + G S N + S ++ + S L LD+
Sbjct: 369 DFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428
Query: 493 SSNHIVGKIPVQFEKLFSLNKLILNLNQLSGG-VPLEFGSLTELQYLDLSANKLSSSIPK 551
S H F L SL L + N +P F L L +LDLS +L P
Sbjct: 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488
Query: 552 SMGNLSKLHYLNLSNNQF 569
+ +LS L LN+S+N F
Sbjct: 489 AFNSLSSLQVLNMSHNNF 506
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGS-IPPTQGNLEALSE 321
SV +L++L LD+S + F+ LSSL ++ + NS + +P L L+
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 322 LGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV- 380
L L QL+ + P + +LSSL+ L + N F+ L L SL L+ NH+
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 534
Query: 381 ------IPHSIG--NLTKLVLVNMCENHLFGLIPKSFRN-LTSLERLR 419
P S+ NLT+ CE+ F K R L +ER+
Sbjct: 535 KQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERME 582
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 30/210 (14%)
Query: 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLR-MLYFDVNHL 161
L YL+LS N + + L +L LD ++ L + E LR ++Y D++H
Sbjct: 375 LKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQM--SEFSVFLSLRNLIYLDISHT 431
Query: 162 HGSIPLE--IGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGN 219
H + LS + VL + N+F +P++
Sbjct: 432 HTRVAFNGIFNGLSSLEVLKMAGNSFQENF-----------------------LPDIFTE 468
Query: 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279
L +L+ LDLSQ QL P + +LS+L +L + N+ F L SL LD S N
Sbjct: 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 528
Query: 280 QLFGSIPLSFSNL-SSLTLMSLFNNSLSGS 308
+ S + SSL ++L N + +
Sbjct: 529 HIMTSKKQELQHFPSSLAFLNLTQNDFACT 558
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545
+LQVLDLS I ++ L L+ LIL N + F L+ LQ L L
Sbjct: 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112
Query: 546 SSSIPKSMGNLSKLHYLNLSNNQF-NHKIPTEFEKLIHLSELDLSHNFLQG 595
+S +G+L L LN+++N + K+P F L +L LDLS N +Q
Sbjct: 113 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
LDLS N L S+++ +FP+L + S I S L L L+ N I
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 502 PVQFEKLFSLNKLI---LNLNQL----------------------SGGVPLEFGSLTELQ 536
F L SL KL+ NL L S +P F +LT L+
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 537 YLDLSANKLSS 547
+LDLS+NK+ S
Sbjct: 153 HLDLSSNKIQS 163
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + + + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKH 141
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN--HP-RDYVS 969
M E D+ S G + E+++ P RDY+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 41/283 (14%)
Query: 767 IGKGRQGSVY--------KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G G VY K E + + AVK N + ++ EFLNE +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRV--AVKTVNESA---SLRERIEFLNEASVMKGFTC 79
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG-------WNQRMNVIKGV 871
++++ G S Q + +V E + G L + L+ E + + + +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
A+ ++YL+ VH +++++N ++ + + DFG+ + + + +++ G
Sbjct: 140 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 194
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNL 986
+ APE T D+ SFGV+ E+ P Y + + + L
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFVMD-GGYL 251
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D P R + ++ +C +P RPT ++ NLL
Sbjct: 252 DQPDNCPER--------VTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 41/283 (14%)
Query: 767 IGKGRQGSVY--------KAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH 818
+G+G G VY K E + + AVK N + ++ EFLNE +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRV--AVKTVNESA---SLRERIEFLNEASVMKGFTC 80
Query: 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFG-------WNQRMNVIKGV 871
++++ G S Q + +V E + G L + L+ E + + + +
Sbjct: 81 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT--- 928
A+ ++YL+ VH +++++N ++ + + DFG+ + + + +++ G
Sbjct: 141 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLL 195
Query: 929 -FGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNL 986
+ APE T D+ SFGV+ E+ P Y + + + L
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFVMD-GGYL 252
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
D P R + ++ +C +P RPT ++ NLL
Sbjct: 253 DQPDNCPER--------VTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPEVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKG 961
M E D+ S G + E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+ K +L + + E+ L E+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKEL 59
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 113
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T T
Sbjct: 114 QGLAFCHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+++F + IG+G G VYKA +G + A+ K +L + + E+ L E+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKEL 58
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYL--------DRGSLTTILKDDAAAKEFGWNQRMNVI 868
H NI+K ++V E+L D +LT I + F ++
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF------QLL 112
Query: 869 KGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT 928
+G+A S+ ++H D+ +N+L+++E ++DFG+A+ +T T
Sbjct: 113 QGLAFCHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 929 FGYAAPEIAHMMR-ATEKYDVHSFGVLALEVI 959
Y APEI + + D+ S G + E++
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 767 IGKGRQGSVYK--AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF 824
+G+G +VYK ++L ++ A+K+ L E + EV L +++H NI+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLV-ALKEIR---LEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
H + +V EYLD+ L L DD N ++ + + + L+Y H
Sbjct: 66 HDIIHTEKSLTLVFEYLDK-DLKQYL-DDCGNIINMHNVKLFLFQ-LLRGLAYCHRQ--- 119
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
++H D+ +N+L++ E ++DFG+A+ + + + T Y P+I
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDI 171
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 31/192 (16%)
Query: 221 NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF--IPSVIGNLKSLFELDLSE 278
+S + L+ +QN S+ + L L L L +N L F + + N+ SL LD+S
Sbjct: 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412
Query: 279 NQLFG-SIPLSFSNLSSLTLMSLFNNSLSGS---------------------IPPTQGNL 316
N L + + + S+ +++L +N L+GS IP +L
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHL 472
Query: 317 EALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNH 376
+AL EL + NQL V L+SL+ ++L+DN + P I YL E H
Sbjct: 473 QALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG-IRYLS-----EWINKH 526
Query: 377 LSGVIPHSIGNL 388
SGV+ +S G++
Sbjct: 527 -SGVVRNSAGSV 537
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL--YGEISFNWRNFPKLGTFNASM 470
+S L F QN V++ L L L +N L + +++ +N L T + S+
Sbjct: 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412
Query: 471 NNIYG-SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEF 529
N++ + + + VL+LSSN + G + F L K++ N +P +
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSV---FRCLPPKVKVLDLHNNRIMSIPKDV 469
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP 574
L LQ L++++N+L S L+ L Y+ L +N ++ P
Sbjct: 470 THLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281
S+ +L+LS N L GS+ L + +L L+ N + IP + +L++L EL+++ NQL
Sbjct: 429 SILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQL 485
Query: 282 FGSIPLS-FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
S+P F L+SL + L +N + P + LSE +IN+ GV+ S G++
Sbjct: 486 -KSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSE---WINKHSGVVRNSAGSV 537
Query: 341 S 341
+
Sbjct: 538 A 538
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 88/222 (39%), Gaps = 57/222 (25%)
Query: 332 VIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKL 391
V PPS SS L N F V LK L L L RN L N K+
Sbjct: 347 VCPPSP---SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK--------NFFKV 395
Query: 392 VLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE---AFGDHPNLTFLDLSQNN 448
L+ +N++SLE L + N+L Y+ A+ + ++ L+LS N
Sbjct: 396 ALMT--------------KNMSSLETLDVSLNSLNSHAYDRTCAWAE--SILVLNLSSNM 439
Query: 449 LYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKL 508
L G +++ +PP K++VLDL +N I+ IP L
Sbjct: 440 LTG--------------------SVFRCLPP------KVKVLDLHNNRIMS-IPKDVTHL 472
Query: 509 FSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550
+L +L + NQL F LT LQY+ L N + P
Sbjct: 473 QALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 29/141 (20%)
Query: 461 PKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520
P+ + S N+I P+I S+L+VL LS N I SL+ + NQ
Sbjct: 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-----------SLDFHVFLFNQ 100
Query: 521 LSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEK 579
+L+YLD+S N+L + S ++ L +L+LS N F+ + EF
Sbjct: 101 -------------DLEYLDVSHNRLQN---ISCCPMASLRHLDLSFNDFDVLPVCKEFGN 144
Query: 580 LIHLSELDLS-HNFLQGEIPP 599
L L+ L LS F Q ++ P
Sbjct: 145 LTKLTFLGLSAAKFRQLDLLP 165
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 84
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 85 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 141
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + WT GT Y APEI
Sbjct: 142 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEI 195
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF- 824
IG G QG V A + GI AVKK + F E++ L + H+NII
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRP--FQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 825 -----HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879
Q ++V E +D +L ++ + ++RM+ + + L +
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMELD------HERMSYL--LYQMLCGIK 140
Query: 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNW--TAFAGTFGYAAPEIA 937
H I+H D+ N+++ S+ + DFG+A+ +N+ T + T Y APE+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKG 961
M D+ S G + E++KG
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + + + ++ + + +
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKH 134
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 190
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN--HP-RDYVS 969
M E D+ S G + E+++ P RDY+
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 43/290 (14%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYL-YKNSLFGFIPSVIGNLKSLFE 273
N + N++S S++ ++ +++ FS N G +L N FG P++ LKSL
Sbjct: 303 NCLTNVSSFSLVSVTIERVKD---FSY----NFGWQHLELVNCKFGQFPTL--KLKSLKR 353
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L + N+ G S +L SL + L N LS +Q + G I
Sbjct: 354 LTFTSNK--GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF--------------GTI 397
Query: 334 PPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG-NLTKLV 392
SL+ L L NG + N +G L+ L L+ ++L + S+ +L L+
Sbjct: 398 --------SLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 448
Query: 393 LVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVY--EAFGDHPNLTFLDLSQNNLY 450
+++ H F L+SLE L+ N+ F + + + F + NLTFLDLSQ L
Sbjct: 449 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS-FQENFLPDIFTELRNLTFLDLSQCQLE 507
Query: 451 GEISFNWRNFPKLGTFNASMNNIYG--SIPPEIGDSSKLQVLDLSSNHIV 498
+ + L N S NN + + P + +S LQVLD S NHI+
Sbjct: 508 QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS--LQVLDYSLNHIM 555
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 204/533 (38%), Gaps = 87/533 (16%)
Query: 95 FSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRML 154
+SF SFP L L+LS + +LS L L L N + + L+ L+ L
Sbjct: 70 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 129
Query: 155 YFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIP 214
+L IG L + L + HN +P
Sbjct: 130 VAVETNLASLENFPIGHLKTLKELNVAHNLIQS-----------------------FKLP 166
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL---FGFI-PSVIGNLKS 270
NL +L LDLS N+++ L L + +L L + FI P ++
Sbjct: 167 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR- 225
Query: 271 LFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD 330
L +L L N F S+ + + + L + + + L +GNLE + + L+
Sbjct: 226 LHKLTLRNN--FDSLNVMKTCIQGLAGLEV--HRLVLGEFRNEGNLEKFDK-----SALE 276
Query: 331 GVIPPSIGNLSSLRTLYL--YDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG-N 387
G+ +I R YL Y +G L L ++S L + V S
Sbjct: 277 GLCNLTI---EEFRLAYLDYYLDGIIDL----FNCLTNVSSFSLVSVTIERVKDFSYNFG 329
Query: 388 LTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN---NLFGKVYEAFGDHPNLTFLDL 444
L LVN C+ FG P L SL+RL F N N F +V D P+L FLDL
Sbjct: 330 WQHLELVN-CK---FGQFPT--LKLKSLKRLTFTSNKGGNAFSEV-----DLPSLEFLDL 378
Query: 445 SQNNL----------YGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSS 494
S+N L +G IS + + G S N + +L+ LD
Sbjct: 379 SRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFL---------GLEQLEHLDFQH 429
Query: 495 NHIVGKIPVQFEKLFSLNKLI-LNLNQLSGGVPLE--FGSLTELQYLDLSANKLSSS-IP 550
+++ K +F SL LI L+++ V F L+ L+ L ++ N + +P
Sbjct: 430 SNL--KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 487
Query: 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH-NFLQGEIPPQIC 602
L L +L+LS Q PT F L L L++SH NF + P C
Sbjct: 488 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 540
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 88/220 (40%), Gaps = 37/220 (16%)
Query: 402 FGLIPKSFRNLTSLERLRFNQN---NLFGKVYEAFGDHPNLTFLDLSQNNL--------- 449
FG P L SL+RL F N N F +V D P+L FLDLS+N L
Sbjct: 340 FGQFPT--LKLKSLKRLTFTSNKGGNAFSEV-----DLPSLEFLDLSRNGLSFKGCCSQS 392
Query: 450 -YGEISFNWRNFPKLGTFNASMN----------NIYGSIPPEIGDSS------KLQVLDL 492
+G IS + + G S N + S ++ + S L LD+
Sbjct: 393 DFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 452
Query: 493 SSNHIVGKIPVQFEKLFSLNKLILNLNQLSGG-VPLEFGSLTELQYLDLSANKLSSSIPK 551
S H F L SL L + N +P F L L +LDLS +L P
Sbjct: 453 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 512
Query: 552 SMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
+ +LS L LN+S+N F ++ L L LD S N
Sbjct: 513 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 30/210 (14%)
Query: 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLR-MLYFDVNHL 161
L YL+LS N + + L +L LD ++ L + E LR ++Y D++H
Sbjct: 399 LKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQM--SEFSVFLSLRNLIYLDISHT 455
Query: 162 HGSIPLE--IGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXFGSIPNVMGN 219
H + LS + VL + N+F +P++
Sbjct: 456 HTRVAFNGIFNGLSSLEVLKMAGNSFQENF-----------------------LPDIFTE 492
Query: 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279
L +L+ LDLSQ QL P + +LS+L +L + N+ F L SL LD S N
Sbjct: 493 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552
Query: 280 QLFGSIPLSFSNL-SSLTLMSLFNNSLSGS 308
+ S + SSL ++L N + +
Sbjct: 553 HIMTSKKQELQHFPSSLAFLNLTQNDFACT 582
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 99
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 156
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + WT GT Y APEI
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEI 210
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 119
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 176
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + WT GT Y APEI
Sbjct: 177 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLAPEI 230
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSM-GNLSKLHYLN 563
F+KL +L +L+L NQL F LT L YL L N+L S+PK + L+ L L+
Sbjct: 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQL-QSLPKGVFDKLTNLTRLD 163
Query: 564 LSNNQFNHKIPTEFEKLIHLSELDLSHNFLQG 595
L NNQ F+KL L +L L+ N L+
Sbjct: 164 LDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKS 195
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 212 SIPN-VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+PN V L +L L L +NQL+ L+NL LYLY N L V L +
Sbjct: 99 SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTN 158
Query: 271 LFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIP 310
L LDL NQL F L+ L +SL +N L S+P
Sbjct: 159 LTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVP 197
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNL 564
++L +L LIL NQL F LT L+ L L N+L S L+ L YL L
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYL 140
Query: 565 SNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIP-G 623
+NQ F+KL +L+ LDL +N LQ +P + +P G
Sbjct: 141 YHNQLQSLPKGVFDKLTNLTRLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDNQLKSVPDG 199
Query: 624 CFEEMRSLSRI 634
F+ + SL+ I
Sbjct: 200 VFDRLTSLTHI 210
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 58/136 (42%)
Query: 240 SLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMS 299
+L L+NL L L N L V L +L EL L ENQL F L++LT +
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLY 139
Query: 300 LFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPN 359
L++N L L L+ L L NQL + L+ L+ L L DN +
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDG 199
Query: 360 EIGYLKSLSKLELCRN 375
L SL+ + L N
Sbjct: 200 VFDRLTSLTHIWLLNN 215
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%)
Query: 288 SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLY 347
+ L++LT + L N L L L EL L NQL + L++L LY
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLY 139
Query: 348 LYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPK 407
LY N L L +L++L+L N L + LT+L +++ +N L +
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDG 199
Query: 408 SFRNLTSLERL 418
F LTSL +
Sbjct: 200 VFDRLTSLTHI 210
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 503 VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYL 562
V +L S++++I N + + +++ L ++YL L NKL ++ L+ L YL
Sbjct: 35 VTQNELNSIDQIIANNSDIKSVQGIQY--LPNVRYLALGGNKLHDI--SALKELTNLTYL 90
Query: 563 NLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIP 622
L+ NQ F+KL +L EL L N LQ +P + +P
Sbjct: 91 ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLYLYHNQLQSLP 149
Query: 623 -GCFEEMRSLSRIDIAYNELQG 643
G F+++ +L+R+D+ N+LQ
Sbjct: 150 KGVFDKLTNLTRLDLDNNQLQS 171
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 60/138 (43%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
+ L +L+ L L+ NQL+ L+NL L L +N L V L +L L
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLY 139
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
L NQL F L++LT + L NN L L L +L L NQL V
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDG 199
Query: 336 SIGNLSSLRTLYLYDNGF 353
L+SL ++L +N +
Sbjct: 200 VFDRLTSLTHIWLLNNPW 217
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 412 LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMN 471
L S++++ N +++ K + PN+ +L L N L+ +IS + L T+
Sbjct: 40 LNSIDQIIANNSDI--KSVQGIQYLPNVRYLALGGNKLH-DISA-LKELTNL-TYLILTG 94
Query: 472 NIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFG 530
N S+P + D + L+ L L N + F+KL +L L L NQL F
Sbjct: 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFD 154
Query: 531 SLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSH 590
LT L LDL N+L S L++L L+L++NQ F++L L+ + L +
Sbjct: 155 KLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLN 214
Query: 591 N 591
N
Sbjct: 215 N 215
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 79/210 (37%), Gaps = 50/210 (23%)
Query: 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420
I YL ++ L L N L + ++ LT L + + N L L F LT+L+ L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPE 480
+N L F NLT+L L N L S+P
Sbjct: 117 VENQLQSLPDGVFDKLTNLTYLYLYHNQLQ-------------------------SLPKG 151
Query: 481 IGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDL 540
+ F+KL +L +L L+ NQL F LT+L+ L L
Sbjct: 152 V-----------------------FDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSL 188
Query: 541 SANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
+ N+L S L+ L ++ L NN ++
Sbjct: 189 NDNQLKSVPDGVFDRLTSLTHIWLLNNPWD 218
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV---IPHSIGNLTKLVL 393
I L ++R L L N + + + + L +L+ L L N L + + + NL +LVL
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 394 VNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
V EN L L F LT+L L N L F NLT LDL N L
Sbjct: 117 V---ENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQL 169
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + + + ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKH 141
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN--HP-RDYVS 969
M E D+ S G + E+++ P RDY+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 25/191 (13%)
Query: 757 AIDDFGEKYCIGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815
+ID + +G+G G VYKA + + A+K+ +L +E + EV L E
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI--RLEHEEEGVPGTAIREVSLLKE 89
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----V 871
++HRNII+ + ++ EY + + K+ + M VIK +
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVS--------MRVIKSFLYQL 141
Query: 872 ANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAH-----VSDFGIAKFLNPHSSNWTAF 925
N +++ H CL H D+ +N+LL + + DFG+A+ +T
Sbjct: 142 INGVNFCHSRRCL----HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE 197
Query: 926 AGTFGYAAPEI 936
T Y PEI
Sbjct: 198 IITLWYRPPEI 208
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 131
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 190
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S G + E+++ H + ++ N + E +L TP +
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVR--HKILFPGRDYIDQWNKVIE-------QLGTPCPEF 241
Query: 998 MDKL 1001
M KL
Sbjct: 242 MKKL 245
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF-GFIPSVIGNLKSLFE 273
+V +L +L LD+S R + LS+L +L + NS F+P + L++L
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
LDLS+ QL P +F++LSSL ++++ +N L L +L ++ L+ N D
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534
Query: 334 P 334
P
Sbjct: 535 P 535
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 88/220 (40%), Gaps = 37/220 (16%)
Query: 402 FGLIPKSFRNLTSLERLRFNQN---NLFGKVYEAFGDHPNLTFLDLSQNNL--------- 449
FG P L SL+RL F N N F +V D P+L FLDLS+N L
Sbjct: 316 FGQFPT--LKLKSLKRLTFTSNKGGNAFSEV-----DLPSLEFLDLSRNGLSFKGCCSQS 368
Query: 450 -YGEISFNWRNFPKLGTFNASMN----------NIYGSIPPEIGDSS------KLQVLDL 492
+G S + + G S N + S ++ + S L LD+
Sbjct: 369 DFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428
Query: 493 SSNHIVGKIPVQFEKLFSLNKLILNLNQLSGG-VPLEFGSLTELQYLDLSANKLSSSIPK 551
S H F L SL L + N +P F L L +LDLS +L P
Sbjct: 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488
Query: 552 SMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
+ +LS L LN+++NQ F++L L ++ L N
Sbjct: 489 AFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 82/196 (41%), Gaps = 13/196 (6%)
Query: 364 LKSLSKLELCRNHLS--GVIPHSIGNLTKLVLVNMCENHLFGLIPKS--FRNLTSLERLR 419
L SL L+L RN LS G S T L +++ N G+I S F L LE L
Sbjct: 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN---GVITMSSNFLGLEQLEHLD 402
Query: 420 FNQNNLFG-KVYEAFGDHPNLTFLDLSQNNLYGEISFN--WRNFPKLGTFNASMNNIYGS 476
F +NL + F NL +LD+S + ++FN + L + N+ +
Sbjct: 403 FQHSNLKQMSEFSVFLSLRNLIYLDISHT--HTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 477 IPPEI-GDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
P+I + L LDLS + P F L SL L + NQL F LT L
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSL 520
Query: 536 QYLDLSANKLSSSIPK 551
Q + L N S P+
Sbjct: 521 QKIWLHTNPWDCSCPR 536
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545
+LQVLDLS I ++ L L+ LIL N + F L+ LQ L L
Sbjct: 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112
Query: 546 SSSIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHNFLQG 595
+S +G+L L LN+++N K+P F L +L LDLS N +Q
Sbjct: 113 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 94 DFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLR- 152
DF +S L YL+LS N + + L +L LD ++ L + E LR
Sbjct: 369 DFGTTS---LKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQM--SEFSVFLSLRN 422
Query: 153 MLYFDVNHLHGSIPLE--IGKLSLINVLTLCHNNFSGRIPPSLGXXXXXXXXXXXXXXXF 210
++Y D++H H + LS + VL + N+F
Sbjct: 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF--------------------- 461
Query: 211 GSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
+P++ L +L+ LDLSQ QL P + +LS+L +L + N L + L S
Sbjct: 462 --LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTS 519
Query: 271 LFELDLSENQLFGSIP 286
L ++ L N S P
Sbjct: 520 LQKIWLHTNPWDCSCP 535
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 210 FGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN--SLFGFIPSVIGN 267
FG P + L SL L + N +G FS +L +L L L +N S G
Sbjct: 316 FGQFPTL--KLKSLKRLTFTSN--KGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 371
Query: 268 LKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYIN 327
SL LDLS N G I +S SN L + + NL+ +SE ++++
Sbjct: 372 TTSLKYLDLSFN---GVITMS-SNFLGLEQLE--------HLDFQHSNLKQMSEFSVFLS 419
Query: 328 QLDGVIPPSIGN-------------LSSLRTLYLYDNGFY-GLVPNEIGYLKSLSKLELC 373
L +I I + LSSL L + N F +P+ L++L+ L+L
Sbjct: 420 -LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 374 RNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
+ L + P + +L+ L ++NM N L + F LTSL+++ + N
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
LDLS N L S+++ +FP+L + S I S L L L+ N I
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 502 PVQFEKLFSLNKLI---LNLNQL----------------------SGGVPLEFGSLTELQ 536
F L SL KL+ NL L S +P F +LT L+
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 537 YLDLSANKLSS 547
+LDLS+NK+ S
Sbjct: 153 HLDLSSNKIQS 163
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 132
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 191
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S G + E+++ H + ++ N + E +L TP +
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVR--HKILFPGRDYIDQWNKVIE-------QLGTPCPEF 242
Query: 998 MDKL 1001
M KL
Sbjct: 243 MKKL 246
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 132
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 191
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S G + E+++ H + ++ N + E +L TP +
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVR--HKILFPGRDYIDQWNKVIE-------QLGTPCPEF 242
Query: 998 MDKL 1001
M KL
Sbjct: 243 MKKL 246
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 137
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 196
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN---HPRDYVS 969
M E D+ S G + E+++ RDY+
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 231
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 139
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 198
Query: 938 HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
M E D+ S G + E+++ H + ++ N + E +L TP +
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVR--HKILFPGRDYIDQWNKVIE-------QLGTPCPEF 249
Query: 998 MDKL 1001
M KL
Sbjct: 250 MKKL 253
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 38/247 (15%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 176
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 235
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN---HPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
M E D+ S G + E+++ RDY+ N + E +L TP
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-----WNKVIE-------QLGTPC 283
Query: 995 RDVMDKL 1001
+ M KL
Sbjct: 284 PEFMKKL 290
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN---HPRDYVS 969
M E D+ S G + E+++ RDY+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 139
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 198
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN---HPRDYVS 969
M E D+ S G + E+++ RDY+
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 12/153 (7%)
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANAL 875
+H NII + ++ ++V+E G L IL+ K F + V+ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ----KFFSEREASAVLFTITKTV 129
Query: 876 SYLHHDCLPPIVHGDISSKNVLLDSE----HEAHVSDFGIAKFLNPHSSNWTAFAGTFGY 931
YLH +VH D+ N+L E + DFG AK L + T +
Sbjct: 130 EYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANF 186
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ D+ S GVL + G P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ + ++RM+ + + L
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 138
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN---HPRDYVS 969
M E D+ S G + E+++ RDY+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 38/247 (15%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q ++V E +D +L +++ E + ++ + + +
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKH 179
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
LH I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 180 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 235
Query: 938 HMMRATEKYDVHSFGVLALEVIKGN---HPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
M E D+ S G + E+++ RDY+ N + E +L TP
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-----WNKVIE-------QLGTPC 283
Query: 995 RDVMDKL 1001
+ M KL
Sbjct: 284 PEFMKKL 290
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIF-AVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNI 821
IG+G G V+KA +L +G F A+K+ Q + M + EV L + H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST--IREVAVLRHLETFEHPNV 76
Query: 822 IKFHGFCSNAQHS-----FIVSEYLDRGSLTTILK---DDAAAKEFGWNQRMNVIKGVAN 873
++ C+ ++ +V E++D+ LTT L + E + +++G
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG--- 132
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L +LH +VH D+ +N+L+ S + ++DFG+A+ + + T+ T Y A
Sbjct: 133 -LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRA 187
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIK 960
PE+ D+ S G + E+ +
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIF-AVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNI 821
IG+G G V+KA +L +G F A+K+ Q + M + EV L + H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST--IREVAVLRHLETFEHPNV 76
Query: 822 IKFHGFCSNAQHS-----FIVSEYLDRGSLTTILK---DDAAAKEFGWNQRMNVIKGVAN 873
++ C+ ++ +V E++D+ LTT L + E + +++G
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG--- 132
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L +LH +VH D+ +N+L+ S + ++DFG+A+ + + T+ T Y A
Sbjct: 133 -LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRA 187
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIK 960
PE+ D+ S G + E+ +
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 767 IGKGRQGSVYKA-ELPSGIIF-AVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNI 821
IG+G G V+KA +L +G F A+K+ Q + M + EV L + H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST--IREVAVLRHLETFEHPNV 76
Query: 822 IKFHGFCSNAQHS-----FIVSEYLDRGSLTTILK---DDAAAKEFGWNQRMNVIKGVAN 873
++ C+ ++ +V E++D+ LTT L + E + +++G
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG--- 132
Query: 874 ALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L +LH +VH D+ +N+L+ S + ++DFG+A+ + + T+ T Y A
Sbjct: 133 -LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRA 187
Query: 934 PEIAHMMRATEKYDVHSFGVLALEVIK 960
PE+ D+ S G + E+ +
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKF 824
+G+G V A L +G +AVK Q + EV L + + ++NI++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQ----AGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
F + ++V E L GS IL K F + V++ VA AL +LH
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNEREASRVVRDVAAALDFLH---TK 130
Query: 885 PIVHGDISSKNVLLDSEHE---AHVSDFGIAKFLNPHSS-------NWTAFAGTFGYAAP 934
I H D+ +N+L +S + + DF + + ++S T G+ Y AP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 935 EIAHMM--RAT---EKYDVHSFGVLALEVIKGNHP 964
E+ + +AT ++ D+ S GV+ ++ G P
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 12/199 (6%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKF- 824
+G G GSV A + SG A+KK + + A + E+L L ++H N+I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA--YRELLLLKHMQHENVIGLL 89
Query: 825 HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLP 884
F + YL + T L+ K F + ++ + L Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK-FSEEKIQYLVYQMLKGLKYIHSAG-- 146
Query: 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPE-IAHMMRAT 943
+VH D+ N+ ++ + E + DFG+A+ + + T + T Y APE I M
Sbjct: 147 -VVHRDLKPGNLAVNEDCELKILDFGLARHAD---AEMTGYVVTRWYRAPEVILSWMHYN 202
Query: 944 EKYDVHSFGVLALEVIKGN 962
+ D+ S G + E++ G
Sbjct: 203 QTVDIWSVGCIMAEMLTGK 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E++ +RH NI++F H IV EY G L + A F ++
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI---CNAGRFSEDEARFF 120
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH--VSDFGIAKFLNPHSSNWTAF 925
+ + + +SY H + H D+ +N LLD + DFG +K HS +
Sbjct: 121 FQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 176
Query: 926 AGTFGYAAPEIAHMMRATEKY-DVHSFGVLALEVIKGNHP 964
GT Y APE+ K DV S GV ++ G +P
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E++ +RH NI++F H IV EY G L + A F ++
Sbjct: 63 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI---CNAGRFSEDEARFF 119
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH--VSDFGIAKFLNPHSSNWTAF 925
+ + + +SY H + H D+ +N LLD + DFG +K HS +
Sbjct: 120 FQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 175
Query: 926 AGTFGYAAPEIAHMMRATEKY-DVHSFGVLALEVIKGNHP 964
GT Y APE+ K DV S GV ++ G +P
Sbjct: 176 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W AGT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LAGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 228 LSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPL 287
L+ NQ+ P +L NL LY N L V L L +LDL++N L SIP
Sbjct: 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL-KSIPR 98
Query: 288 -SFSNLSSLTLMSLFNN 303
+F NL SLT + L+NN
Sbjct: 99 GAFDNLKSLTHIYLYNN 115
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTE 534
S+P G + Q L L++N I P F+ L +L +L N N+L+ F LT+
Sbjct: 25 ASVPA--GIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQ 82
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L LDL+ N L S + NL L ++ L NN ++
Sbjct: 83 LTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118
Score = 35.0 bits (79), Expect = 0.24, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHK 572
+L LN NQ++ P F L LQ L ++NKL++ L++L L+L++N
Sbjct: 37 RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSI 96
Query: 573 IPTEFEKLIHLSELDLSHN 591
F+ L L+ + L +N
Sbjct: 97 PRGAFDNLKSLTHIYLYNN 115
Score = 33.9 bits (76), Expect = 0.51, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 516 LNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575
+ L + G+P T+ Q L L+ N+++ P +L L L ++N+ IPT
Sbjct: 22 IRLASVPAGIP------TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPT 74
Query: 576 E-FEKLIHLSELDLSHNFLQ 594
F+KL L++LDL+ N L+
Sbjct: 75 GVFDKLTQLTQLDLNDNHLK 94
Score = 33.1 bits (74), Expect = 0.73, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335
L+ NQ+ P F +L +L + +N L+ L L++L L N L +
Sbjct: 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRG 99
Query: 336 SIGNLSSLRTLYLYDN 351
+ NL SL +YLY+N
Sbjct: 100 AFDNLKSLTHIYLYNN 115
Score = 33.1 bits (74), Expect = 0.76, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 373 CRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEA 432
C+N +P I + + +N N + L P F +L +L++L FN N L
Sbjct: 19 CQNIRLASVPAGIPTDKQRLWLN--NNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGV 76
Query: 433 FGDHPNLTFLDLSQNNL 449
F LT LDL+ N+L
Sbjct: 77 FDKLTQLTQLDLNDNHL 93
Score = 32.7 bits (73), Expect = 1.00, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSLSGS 308
L+L N + P V +L +L +L + N+L +IP F L+ LT + L +N L S
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKL-TAIPTGVFDKLTQLTQLDLNDNHLK-S 95
Query: 309 IPPTQ-GNLEALSELGLYINQLD 330
IP NL++L+ + LY N D
Sbjct: 96 IPRGAFDNLKSLTHIYLYNNPWD 118
Score = 30.4 bits (67), Expect = 6.0, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 111 NVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEI- 169
N+ ++P I + + L L NNQ++ + P HL L+ LYF+ N L +IP +
Sbjct: 21 NIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKL-TAIPTGVF 77
Query: 170 GKLSLINVLTLCHNNF 185
KL+ + L L N+
Sbjct: 78 DKLTQLTQLDLNDNHL 93
Score = 30.0 bits (66), Expect = 7.1, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 327 NQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG 386
NQ+ + P +L +L+ LY N + L L++L+L NHL + +
Sbjct: 43 NQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFD 102
Query: 387 NLTKLVLVNMCEN 399
NL L + + N
Sbjct: 103 NLKSLTHIYLYNN 115
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F IG G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276
+ L S+ LDL+ Q+ P LA LSNL +LYL N + P + L +L L +
Sbjct: 109 IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 164
Query: 277 SENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336
NQ+ PL +NLS LT + +N +S P +L L E+ L NQ+ V P
Sbjct: 165 GNNQVNDLTPL--ANLSKLTTLRADDNKISDISP--LASLPNLIEVHLKDNQISDVSP-- 218
Query: 337 IGNLSSL 343
+ NLS+L
Sbjct: 219 LANLSNL 225
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANK 544
+K+ L+LS N + K L S+ L L Q++ PL L+ LQ L L N+
Sbjct: 91 TKITELELSGNPL--KNVSAIAGLQSIKTLDLTSTQITDVTPL--AGLSNLQVLYLDLNQ 146
Query: 545 LSSSIPKSMGNLSKLHYLNLSNNQFNHKIP 574
+++ P + L+ L YL++ NNQ N P
Sbjct: 147 ITNISP--LAGLTNLQYLSIGNNQVNDLTP 174
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F IG G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 368 SKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFG 427
SK+ R LS V P I + T+ + N+ EN++ + +FR+L LE L+ +N++
Sbjct: 57 SKVVCTRRGLSEV-PQGIPSNTRYL--NLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ 113
Query: 428 KVYEAFGDHPNLTFLDLSQNNL----------YGEISFNW-RNFPKLGTFNASMNNIYGS 476
AF +L L+L N L ++ W RN P + + N +
Sbjct: 114 IEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSL 173
Query: 477 IPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKL---ILNLNQLSGGVPLEFGSLT 533
+ ++G+ KL+ + + FE LF+L L + N+ + PL
Sbjct: 174 MRLDLGELKKLEYISEGA----------FEGLFNLKYLNLGMCNIKDMPNLTPL-----V 218
Query: 534 ELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
L+ L++S N P S LS L L + N+Q + F+ L L EL+L+HN L
Sbjct: 219 GLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNL 278
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 101/254 (39%), Gaps = 31/254 (12%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
S+ R L L +N + + +L L L+L RN + + + L L + + +N
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134
Query: 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN-WRN 459
L + +F L+ L L N + AF P+L LDL + IS +
Sbjct: 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG 194
Query: 460 FPKLGTFNASMNNIYG--SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILN 517
L N M NI ++ P +G L+ L++S NH P F L SL KL +
Sbjct: 195 LFNLKYLNLGMCNIKDMPNLTPLVG----LEELEMSGNHFPEIRPGSFHGLSSLKKLWVM 250
Query: 518 LNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEF 577
+Q+S F L L L+L+ N LSS +P + F
Sbjct: 251 NSQVSLIERNAFDGLASLVELNLAHNNLSS-LPHDL-----------------------F 286
Query: 578 EKLIHLSELDLSHN 591
L +L EL L HN
Sbjct: 287 TPLRYLVELHLHHN 300
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 111/279 (39%), Gaps = 51/279 (18%)
Query: 293 SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNG 352
S+ ++L N++ T +L L L L N + + + L+SL TL L+DN
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134
Query: 353 FYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFR-N 411
+ YL L +L L RN+ IP ++ F +P R +
Sbjct: 135 LTVIPSGAFEYLSKLRELWL-RNNPIESIP----------------SYAFNRVPSLMRLD 177
Query: 412 LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMN 471
L L++L + F ++ NL +L+L N+ ++ P L
Sbjct: 178 LGELKKLEYISEGAFEGLF-------NLKYLNLGMCNI--------KDMPNLT------- 215
Query: 472 NIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS 531
P +G L+ L++S NH P F L SL KL + +Q+S F
Sbjct: 216 -------PLVG----LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDG 264
Query: 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L L L+L+ N LSS L L L+L +N +N
Sbjct: 265 LASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 4/167 (2%)
Query: 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279
L SL+ L+L N L + LS L L+L N + + SL LDL E
Sbjct: 122 LASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL 181
Query: 280 QLFGSIPL-SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
+ I +F L +L ++L ++ P L L EL + N + P S
Sbjct: 182 KKLEYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPEIRPGSFH 239
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI 385
LSSL+ L++ ++ + N L SL +L L N+LS +PH +
Sbjct: 240 GLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS-LPHDL 285
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 100/238 (42%), Gaps = 13/238 (5%)
Query: 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285
L+L +N ++ + +L +L +L L +NS+ L SL L+L +N L
Sbjct: 80 LNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIP 139
Query: 286 PLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRT 345
+F LS L + L NN + SIP N S + L + +L + S G L
Sbjct: 140 SGAFEYLSKLRELWLRNNPIE-SIPSYAFN-RVPSLMRLDLGELKKLEYISEGAFEGLFN 197
Query: 346 LYLYDNGFYGL--VPNEIGYLKSLSKLELCRNHLSGVIP---HSIGNLTKLVLVNMCENH 400
L + G + +PN + L L +LE+ NH + P H + +L KL ++ N
Sbjct: 198 LKYLNLGMCNIKDMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVM----NS 252
Query: 401 LFGLIPK-SFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
LI + +F L SL L NNL ++ F L L L N + W
Sbjct: 253 QVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILW 310
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 212 SIPN-VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P+ V L L+ L LSQNQ++ L+ L ILYL++N L V L
Sbjct: 42 SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQ 101
Query: 271 LFELDLSENQLFGSIPLS-FSNLSSLTLMSLFNNSLSGSIP 310
L EL L NQL S+P F L+SL + L N S P
Sbjct: 102 LKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Query: 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSI 309
L L N L V L L +L LS+NQ+ F L+ LT++ L N L
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLP 92
Query: 310 PPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364
L L EL L NQL V L+SL+ ++L+ N + P I YL
Sbjct: 93 NGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP-RIDYL 146
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Query: 476 SIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTEL 535
S+P I S+ L+L SN + F+KL L KL L+ NQ+ F LT+L
Sbjct: 21 SVPTGIPSSAT--RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL 78
Query: 536 QYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQG 595
L L NKL S L++L L L NQ F++L L ++ L N
Sbjct: 79 TILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138
Query: 596 EIP 598
P
Sbjct: 139 SCP 141
Score = 33.9 bits (76), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHIV 498
T L+L N L + +L + S N I S+P + D +KL +L L N +
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQ 89
Query: 499 GKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPK 551
F+KL L +L L+ NQL F LT LQ + L N S P+
Sbjct: 90 SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 471 NNIYGSIPPEIGDS-SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEF 529
+N S+P + D ++L L LS N I F+KL L L L+ N+L F
Sbjct: 37 SNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVF 96
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP 574
LT+L+ L L N+L S L+ L + L N ++ P
Sbjct: 97 DKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 14/175 (8%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEF----LNEVLALTEIRHRNI 821
+G+G+ +VYKA + + I A+KK L +D L E+ L E+ H NI
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIK---LGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD 881
I + + +V ++++ L I+KD++ + ++ L YLH
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQH 131
Query: 882 CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
I+H D+ N+LLD ++DFG+AK + + T Y APE+
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 41/249 (16%)
Query: 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKF--------NSQLLFDEMA 801
Y+ I +++ GE +G G G V+K +G + AVK+ N ++L D
Sbjct: 20 YQAEINDLENLGE---MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMD--- 73
Query: 802 DQDEFLNEVLALTEIRHRNIIK-FHGFCSNAQHSFIVSEYLDRGS--LTTILKDDAAAKE 858
L+ VL + + I++ F F +N FI E + + L ++ +
Sbjct: 74 -----LDVVLKSHDCPY--IVQCFGTFITNTD-VFIAMELMGTCAEKLKKRMQGPIPERI 125
Query: 859 FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA-KFLNP 917
G +M V + AL YL ++H D+ N+LLD + + DFGI+ + ++
Sbjct: 126 LG---KMTV--AIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178
Query: 918 HSSNWTAFAGTFGYAAPEIAHMMRATE-----KYDVHSFGVLALEVIKGNHPRDYVSTNF 972
+ + + AG Y APE T+ + DV S G+ +E+ G P T+F
Sbjct: 179 KAKDRS--AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF 236
Query: 973 SSFSNMITE 981
+ ++ E
Sbjct: 237 EVLTKVLQE 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F IG G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 38/255 (14%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 37 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L +++ + ++RM+ + + L
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 143
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 202
Query: 938 HMMRATEKYDVHSFGVLALEVI--KGNHP-RDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
M E D+ S G + E++ K P RDY+ N + E +L TP
Sbjct: 203 LGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-----WNKVIE-------QLGTPC 250
Query: 995 RDVMDKLMSIMEVAI 1009
+ M KL + +
Sbjct: 251 PEFMKKLQPTVRTYV 265
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 796 LFDEMADQDE---FLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILK 851
+ E AD E ++E+ +T++ H NI+ G C+ + +++ EY G L L+
Sbjct: 82 MLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 141
Query: 852 DDAAA-----------KEFGWNQRMNVIK---------GVANALSYLHHDCLPPIVHGDI 891
K + +NV+ VA + +L VH D+
Sbjct: 142 SKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDL 198
Query: 892 SSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGT---FGYAAPEIAHMMRATEKYDV 948
+++NVL+ + DFG+A+ + SN+ + APE T K DV
Sbjct: 199 AARNVLVTHGKVVKICDFGLARDIMS-DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDV 257
Query: 949 HSFGVLALEV 958
S+G+L E+
Sbjct: 258 WSYGILLWEI 267
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Query: 871 VANALSYLH-HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAFAG 927
VA + +L C +H D++++N+LL + + DFG+A+ + NP
Sbjct: 208 VARGMEFLSSRKC----IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 928 TFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNL 986
+ APE + K DV S+GVL E+ G P V + + + + + +
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD----EDFCSRLREGM 319
Query: 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
R P S I ++ + C P+ RP ++ L
Sbjct: 320 RMRAPEYS------TPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 85
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 142
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 143 YLHSLDL---IYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 196
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 99
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 156
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 38/247 (15%)
Query: 767 IGKGRQGSV---YKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK 823
IG G QG V Y A L + A+KK + F E++ + + H+NII
Sbjct: 26 IGSGAQGIVCAAYDAILERNV--AIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 824 F------HGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSY 877
Q +IV E +D +L +++ + ++RM+ + + L
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD------HERMSYL--LYQMLCG 132
Query: 878 LHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA 937
+ H I+H D+ N+++ S+ + DFG+A+ S T + T Y APE+
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 191
Query: 938 HMMRATEKYDVHSFGVLALEVI--KGNHP-RDYVSTNFSSFSNMITEINQNLDHRLPTPS 994
M E D+ S G + E++ K P RDY+ N + E +L TP
Sbjct: 192 LGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-----WNKVIE-------QLGTPC 239
Query: 995 RDVMDKL 1001
+ M KL
Sbjct: 240 PEFMKKL 246
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 99
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ E + R + +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 156
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ E + R + +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ E + R + +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKEIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+++D + V+DFG+AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 760 DFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-R 817
+F E IG G GSV+K + G I+A+K+ L D+ L EV A + +
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHAVLGQ 67
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALS 876
H +++++ + H I +EY + GSL + ++ F + +++ V L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 877 YLHHDCLPPIVHGDISSKNVLL 898
Y+H L VH DI N+ +
Sbjct: 128 YIHSMSL---VHMDIKPSNIFI 146
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545
+LQVLDLS I ++ L L+ LIL N + F L+ LQ L L
Sbjct: 55 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 114
Query: 546 SSSIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHNFLQG 595
+S +G+L L LN+++N K+P F L +L LDLS N +Q
Sbjct: 115 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
LDLS N L S+++ +FP+L + S I S L L L+ N I
Sbjct: 35 LDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 94
Query: 502 PVQFEKLFSLNKLI---LNLNQL----------------------SGGVPLEFGSLTELQ 536
F L SL KL+ NL L S +P F +LT L+
Sbjct: 95 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 154
Query: 537 YLDLSANKLSS 547
+LDLS+NK+ S
Sbjct: 155 HLDLSSNKIQS 165
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545
+LQVLDLS I ++ L L+ LIL N + F L+ LQ L L
Sbjct: 54 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 113
Query: 546 SSSIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHNFLQG 595
+S +G+L L LN+++N K+P F L +L LDLS N +Q
Sbjct: 114 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
LDLS N L S+++ +FP+L + S I S L L L+ N I
Sbjct: 34 LDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 93
Query: 502 PVQFEKLFSLNKLI---LNLNQL----------------------SGGVPLEFGSLTELQ 536
F L SL KL+ NL L S +P F +LT L+
Sbjct: 94 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 153
Query: 537 YLDLSANKLSS 547
+LDLS+NK+ S
Sbjct: 154 HLDLSSNKIQS 164
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 760 DFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-R 817
+F E IG G GSV+K + G I+A+K+ L D+ L EV A + +
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHAVLGQ 67
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALS 876
H +++++ + H I +EY + GSL + ++ F + +++ V L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 877 YLHHDCLPPIVHGDISSKNVLL 898
Y+H L VH DI N+ +
Sbjct: 128 YIHSMSL---VHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 760 DFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-R 817
+F E IG G GSV+K + G I+A+K+ L D+ L EV A + +
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHAVLGQ 69
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALS 876
H +++++ + H I +EY + GSL + ++ F + +++ V L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 877 YLHHDCLPPIVHGDISSKNVLL 898
Y+H L VH DI N+ +
Sbjct: 130 YIHSMSL---VHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 760 DFGEKYCIGKGRQGSVYK-AELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-R 817
+F E IG G GSV+K + G I+A+K+ L D+ L EV A + +
Sbjct: 8 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHAVLGQ 65
Query: 818 HRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALS 876
H +++++ + H I +EY + GSL + ++ F + +++ V L
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 877 YLHHDCLPPIVHGDISSKNVLL 898
Y+H L VH DI N+ +
Sbjct: 126 YIHSMSL---VHMDIKPSNIFI 144
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIA---KFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+V+ D+ N+LLD +SD G+A PH+S GT GY APE+ A
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 943 TE-KYDVHSFGVLALEVIKGNHP 964
+ D S G + ++++G+ P
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545
+LQVLDLS I ++ L L+ LIL N + F L+ LQ L L
Sbjct: 54 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 113
Query: 546 SSSIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHNFLQG 595
+S +G+L L LN+++N K+P F L +L LDLS N +Q
Sbjct: 114 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
LDLS N L S+++ +FP+L + S I S L L L+ N I
Sbjct: 34 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 93
Query: 502 PVQFEKLFSLNKLI---LNLNQL----------------------SGGVPLEFGSLTELQ 536
F L SL KL+ NL L S +P F +LT L+
Sbjct: 94 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 153
Query: 537 YLDLSANKLSS 547
+LDLS+NK+ S
Sbjct: 154 HLDLSSNKIQS 164
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIA---KFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+V+ D+ N+LLD +SD G+A PH+S GT GY APE+ A
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 943 TE-KYDVHSFGVLALEVIKGNHP 964
+ D S G + ++++G+ P
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFAEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 119
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ E + R + +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 176
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 177 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 230
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545
+LQVLDLS I ++ L L+ LIL N + F L+ LQ L L
Sbjct: 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112
Query: 546 SSSIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHNFLQG 595
+S +G+L L LN+++N K+P F L +L LDLS N +Q
Sbjct: 113 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
LDLS N L S+++ +FP+L + S I S L L L+ N I
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 502 PVQFEKLFSLNKLI---LNLNQL----------------------SGGVPLEFGSLTELQ 536
F L SL KL+ NL L S +P F +LT L+
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 537 YLDLSANKLSS 547
+LDLS+NK+ S
Sbjct: 153 HLDLSSNKIQS 163
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIA---KFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+V+ D+ N+LLD +SD G+A PH+S GT GY APE+ A
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 366
Query: 943 TE-KYDVHSFGVLALEVIKGNHP 964
+ D S G + ++++G+ P
Sbjct: 367 YDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 16/202 (7%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A + + I A KK + D D F E+ + + H NII+ +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ ++V E G L + + F + ++K V +A++Y H
Sbjct: 90 ETFEDNTDIYLVMELCTGGEL---FERVVHKRVFRESDAARIMKDVLSAVAYCHKLN--- 143
Query: 886 IVHGDISSKNVLL--DS-EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+ H D+ +N L DS + + DFG+A P T GT Y +P++ +
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQVLEGLYG 202
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
E D S GV+ ++ G P
Sbjct: 203 PE-CDEWSAGVMMYVLLCGYPP 223
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 886 IVHGDISSKNVLLDSEHEAHVSDFGIA---KFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+V+ D+ N+LLD +SD G+A PH+S GT GY APE+ A
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 943 TE-KYDVHSFGVLALEVIKGNHP 964
+ D S G + ++++G+ P
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ E + R + +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + +G FA+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 99
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 156
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 210
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 93
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ E + R + +
Sbjct: 94 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 150
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 151 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 204
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 16/202 (7%)
Query: 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825
IG+G G V A + + I A KK + D D F E+ + + H NII+ +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP 885
+ ++V E G L + + F + ++K V +A++Y H
Sbjct: 73 ETFEDNTDIYLVMELCTGGEL---FERVVHKRVFRESDAARIMKDVLSAVAYCHKLN--- 126
Query: 886 IVHGDISSKNVLL--DS-EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA 942
+ H D+ +N L DS + + DFG+A P T GT Y +P++ +
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQVLEGLYG 185
Query: 943 TEKYDVHSFGVLALEVIKGNHP 964
E D S GV+ ++ G P
Sbjct: 186 PE-CDEWSAGVMMYVLLCGYPP 206
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ E + R + +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + +G FA+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + +G FA+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKEIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+++D + V+DFG+AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G G VY+ + I AVK D ++++F++E + + + H +I+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD---NKEKFMSEAVIMKNLDHPHIV 88
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVANALS 876
K G + ++I+ E G L L+ + + V+ + A++
Sbjct: 89 KLIGIIEE-EPTWIIMELYPYGELGHYLERN--------KNSLKVLTLVLYSLQICKAMA 139
Query: 877 YLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG-TFGYAAP 934
YL +C VH DI+ +N+L+ S + DFG+++++ + + +P
Sbjct: 140 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIK-GNHP 964
E + R T DV F V E++ G P
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G G VY+ + I AVK D ++++F++E + + + H +I+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD---NKEKFMSEAVIMKNLDHPHIV 72
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVANALS 876
K G + ++I+ E G L L+ + + V+ + A++
Sbjct: 73 KLIGIIEE-EPTWIIMELYPYGELGHYLERN--------KNSLKVLTLVLYSLQICKAMA 123
Query: 877 YLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG-TFGYAAP 934
YL +C VH DI+ +N+L+ S + DFG+++++ + + +P
Sbjct: 124 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIK-GNHP 964
E + R T DV F V E++ G P
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 767 IGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
+G+G G VY+ + I AVK D ++++F++E + + + H +I+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD---NKEKFMSEAVIMKNLDHPHIV 76
Query: 823 KFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK------GVANALS 876
K G + ++I+ E G L L+ + + V+ + A++
Sbjct: 77 KLIGIIEE-EPTWIIMELYPYGELGHYLERN--------KNSLKVLTLVLYSLQICKAMA 127
Query: 877 YLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG-TFGYAAP 934
YL +C VH DI+ +N+L+ S + DFG+++++ + + +P
Sbjct: 128 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 935 EIAHMMRATEKYDVHSFGVLALEVIK-GNHP 964
E + R T DV F V E++ G P
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTE 534
S+P G + QVL L N I P F++L L +L L+ NQL+ F LT+
Sbjct: 30 ASVP--TGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 87
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L L L+ N+L S + NL L ++ L NN ++
Sbjct: 88 LTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWD 123
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCEN 399
++ + LYLYDN L P L L++L+L N L+ V+P + LT+L +++ +N
Sbjct: 38 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 96
Query: 400 HLFGLIPKSFRNLTSLERLRFNQN 423
L + +F NL SL + N
Sbjct: 97 QLKSIPRGAFDNLKSLTHIWLLNN 120
Score = 37.4 bits (85), Expect = 0.040, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 210 FGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLK 269
S+P G + +L L NQ+ P L+ L L L N L V L
Sbjct: 29 LASVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 86
Query: 270 SLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNN 303
L +L L++NQL SIP +F NL SLT + L NN
Sbjct: 87 QLTQLSLNDNQL-KSIPRGAFDNLKSLTHIWLLNN 120
Score = 36.2 bits (82), Expect = 0.094, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L L +NQ+ P F L+ LT + L NN L+ L L++L L NQL +
Sbjct: 43 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 102
Query: 334 PPSIGNLSSLRTLYLYDN 351
+ NL SL ++L +N
Sbjct: 103 RGAFDNLKSLTHIWLLNN 120
Score = 33.9 bits (76), Expect = 0.44, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 517 NLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE 576
+L + G+P T Q L L N+++ P L++L L+L NNQ
Sbjct: 28 SLASVPTGIP------TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGV 81
Query: 577 FEKLIHLSELDLSHNFLQ 594
F+KL L++L L+ N L+
Sbjct: 82 FDKLTQLTQLSLNDNQLK 99
Score = 33.5 bits (75), Expect = 0.55, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 514 LILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKI 573
L L NQ++ P F LT+L LDL N+L+ L++L L+L++NQ
Sbjct: 43 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 102
Query: 574 PTEFEKLIHLSELDLSHN 591
F+ L L+ + L +N
Sbjct: 103 RGAFDNLKSLTHIWLLNN 120
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LXGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ E + R + +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 213 IPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI------G 266
+P+ L L L++N LR ++P S+A+L+ L L + +P + G
Sbjct: 119 LPDTXQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177
Query: 267 NLKSLFELDLSENQLFG--SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGL 324
+ L L + G S+P S +NL +L + + N+ LS ++ P +L L EL L
Sbjct: 178 EHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDL 236
Query: 325 YINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLEL 372
PP G + L+ L L D +P +I L L KL+L
Sbjct: 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 486 KLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545
+LQVLDLS I ++ L L+ LIL N + F L+ LQ L L
Sbjct: 55 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALETNL 114
Query: 546 SSSIPKSMGNLSKLHYLNLSNNQFNH-KIPTEFEKLIHLSELDLSHNFLQG 595
+S +G+L L LN+++N K+P F L +L LDLS N +Q
Sbjct: 115 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 442 LDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501
LDLS N L S+++ +FP+L + S I S L L L+ N I
Sbjct: 35 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 94
Query: 502 PVQFEKLFSLNKLI---LNLNQL----------------------SGGVPLEFGSLTELQ 536
F L SL KL+ NL L S +P F +LT L+
Sbjct: 95 LGAFSGLSSLQKLVALETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 154
Query: 537 YLDLSANKLSS 547
+LDLS+NK+ S
Sbjct: 155 HLDLSSNKIQS 165
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTE 534
S+P I ++ QVL L N I P F++L L +L L+ NQL+ F LT+
Sbjct: 22 ASVPTGIPTTT--QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L L L+ N+L S + NL L ++ L NN ++
Sbjct: 80 LTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCEN 399
++ + LYLYDN L P L L++L+L N L+ V+P + LT+L +++ +N
Sbjct: 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 88
Query: 400 HLFGLIPKSFRNLTSLERL 418
L + +F NL SL +
Sbjct: 89 QLKSIPRGAFDNLKSLTHI 107
Score = 37.0 bits (84), Expect = 0.051, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 210 FGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLK 269
S+P G + +L L NQ+ P L+ L L L N L V L
Sbjct: 21 LASVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78
Query: 270 SLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNN 303
L +L L++NQL SIP +F NL SLT + L NN
Sbjct: 79 QLTQLSLNDNQL-KSIPRGAFDNLKSLTHIWLLNN 112
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L L +NQ+ P F L+ LT + L NN L+ L L++L L NQL +
Sbjct: 35 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 94
Query: 334 PPSIGNLSSLRTLYLYDN 351
+ NL SL ++L +N
Sbjct: 95 RGAFDNLKSLTHIWLLNN 112
Score = 33.9 bits (76), Expect = 0.54, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 517 NLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE 576
+L + G+P T Q L L N+++ P L++L L+L NNQ
Sbjct: 20 SLASVPTGIP------TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGV 73
Query: 577 FEKLIHLSELDLSHNFLQ 594
F+KL L++L L+ N L+
Sbjct: 74 FDKLTQLTQLSLNDNQLK 91
Score = 33.5 bits (75), Expect = 0.64, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 514 LILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKI 573
L L NQ++ P F LT+L LDL N+L+ L++L L+L++NQ
Sbjct: 35 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 94
Query: 574 PTEFEKLIHLSELDLSHN 591
F+ L L+ + L +N
Sbjct: 95 RGAFDNLKSLTHIWLLNN 112
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKF---NSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G V+KA +G A+KK N + F A L E+ L ++H N++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-----LREIKILQLLKHENVV 79
Query: 823 KFHGFCSNAQHSF--------IVSEYLDR---GSLTTILKDDAAAKEFGWNQRMNVIKGV 871
C + +V ++ + G L+ +L +F ++ V++ +
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQML 133
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL----NPHSSNWTAFAG 927
N L Y+H + I+H D+ + NVL+ + ++DFG+A+ N + +
Sbjct: 134 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 928 TFGYAAPEI 936
T Y PE+
Sbjct: 191 TLWYRPPEL 199
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + +G +A+K + Q + ++ + LNE L +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 91
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 148
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 149 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 202
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKF---NSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G V+KA +G A+KK N + F A L E+ L ++H N++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-----LREIKILQLLKHENVV 80
Query: 823 KFHGFCSNAQHSF--------IVSEYLDR---GSLTTILKDDAAAKEFGWNQRMNVIKGV 871
C + +V ++ + G L+ +L +F ++ V++ +
Sbjct: 81 NLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQML 134
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL----NPHSSNWTAFAG 927
N L Y+H + I+H D+ + NVL+ + ++DFG+A+ N + +
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 928 TFGYAAPEI 936
T Y PE+
Sbjct: 192 TLWYRPPEL 200
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 30/210 (14%)
Query: 766 CIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKF 824
IG G G V++A+L A+KK + F N L + I +H N++
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKK---------VLQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 825 HG-FCSNAQHSF-----IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIK----GVANA 874
F SN +V EY+ T+ + + M +IK + +
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEA-HVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933
L+Y+H I H DI +N+LLD + DFG AK L N + + Y A
Sbjct: 154 LAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRA 209
Query: 934 PE-IAHMMRATEKYDVHSFGVLALEVIKGN 962
PE I T D+ S G + E+++G
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKF---NSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G V+KA +G A+KK N + F A L E+ L ++H N++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-----LREIKILQLLKHENVV 80
Query: 823 KFHGFCSNAQHSF--------IVSEYLDR---GSLTTILKDDAAAKEFGWNQRMNVIKGV 871
C + +V ++ + G L+ +L +F ++ V++ +
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQML 134
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL----NPHSSNWTAFAG 927
N L Y+H + I+H D+ + NVL+ + ++DFG+A+ N + +
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 928 TFGYAAPEI 936
T Y PE+
Sbjct: 192 TLWYRPPEL 200
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + +G +A+K + Q + ++ + LNE L +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 91
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ E + R + +
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 148
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 149 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 202
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 767 IGKGRQGSVYKAE-LPSGIIFAVKKF---NSQLLFDEMADQDEFLNEVLALTEIRHRNII 822
IG+G G V+KA +G A+KK N + F A L E+ L ++H N++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-----LREIKILQLLKHENVV 80
Query: 823 KFHGFCSNAQHSF--------IVSEYLDR---GSLTTILKDDAAAKEFGWNQRMNVIKGV 871
C + +V ++ + G L+ +L +F ++ V++ +
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQML 134
Query: 872 ANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL----NPHSSNWTAFAG 927
N L Y+H + I+H D+ + NVL+ + ++DFG+A+ N + +
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 928 TFGYAAPEI 936
T Y PE+
Sbjct: 192 TLWYRPPEL 200
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 475 GSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTE 534
S+P G + QVL L N I P F++L L +L L+ NQL+ F LT+
Sbjct: 22 ASVP--TGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79
Query: 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570
L L L+ N+L S + NL L ++ L NN ++
Sbjct: 80 LTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWD 115
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCEN 399
++ + LYLYDN L P L L++L+L N L+ V+P + LT+L +++ +N
Sbjct: 30 TTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 88
Query: 400 HLFGLIPKSFRNLTSLERL 418
L + +F NL SL +
Sbjct: 89 QLKSIPRGAFDNLRSLTHI 107
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 210 FGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLK 269
S+P G + +L L N++ P L+ L L L N L V L
Sbjct: 21 LASVPT--GIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78
Query: 270 SLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNN 303
L +L L++NQL SIP +F NL SLT + L NN
Sbjct: 79 QLTQLSLNDNQL-KSIPRGAFDNLRSLTHIWLLNN 112
Score = 34.3 bits (77), Expect = 0.37, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 517 NLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTE 576
+L + G+P T Q L L N+++ P L++L L+L NNQ
Sbjct: 20 SLASVPTGIP------TTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGV 73
Query: 577 FEKLIHLSELDLSHNFLQ 594
F+KL L++L L+ N L+
Sbjct: 74 FDKLTQLTQLSLNDNQLK 91
Score = 34.3 bits (77), Expect = 0.39, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L L +N++ P F L+ LT + L NN L+ L L++L L NQL +
Sbjct: 35 LYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 94
Query: 334 PPSIGNLSSLRTLYLYDN 351
+ NL SL ++L +N
Sbjct: 95 RGAFDNLRSLTHIWLLNN 112
Score = 31.6 bits (70), Expect = 2.1, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 514 LILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKI 573
L L N+++ P F LT+L LDL N+L+ L++L L+L++NQ
Sbjct: 35 LYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 94
Query: 574 PTEFEKLIHLSELDLSHN 591
F+ L L+ + L +N
Sbjct: 95 RGAFDNLRSLTHIWLLNN 112
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
Length = 317
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 99/258 (38%), Gaps = 33/258 (12%)
Query: 780 LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC---SNAQH-SF 835
L G +A+K+ +L E D++E E H NI++ +C A+H ++
Sbjct: 51 LHDGHFYALKR----ILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106
Query: 836 IVSEYLDRGSL-TTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSK 894
++ + RG+L I + +Q + ++ G+ L +H H D+
Sbjct: 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPT 163
Query: 895 NVLLDSEHEAHVSDFGIAKFLNPHS---------SNWTAFAGTFGYAAPEIAHMMR---A 942
N+LL E + + D G H +W A T Y APE+ +
Sbjct: 164 NILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVI 223
Query: 943 TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLM 1002
E+ DV S G + ++ G P D V S + + NQ + P S + L
Sbjct: 224 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ--NQLSIPQSPRHSSALWQLLN 281
Query: 1003 SIMEVAILCLVESPEARP 1020
S+M V P RP
Sbjct: 282 SMMTV-------DPHQRP 292
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + +G +A+K + Q + ++ + LNE L +
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 119
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFE 176
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 177 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 230
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+++D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 10/160 (6%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E++ +RH NI++F H IV EY G L + A F ++
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI---CNAGRFSEDEARFF 120
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH--VSDFGIAKFLNPHSSNWTAF 925
+ + + +SY H + H D+ +N LLD + FG +K HS +
Sbjct: 121 FQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST- 176
Query: 926 AGTFGYAAPEIAHMMRATEKY-DVHSFGVLALEVIKGNHP 964
GT Y APE+ K DV S GV ++ G +P
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + +G +A+K + Q + ++ + LNE L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 99
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 156
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+++D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 83/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 34 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRAELTKL--QVDGTLPVLGTLDLSHNQ 88
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 89 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 124
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N+L+ + + L L + + EN
Sbjct: 125 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 184 LYT-IPKGF 191
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 72 VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329
L N+L P + L +SL NN+L+ LE L L L N L
Sbjct: 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMN-----NIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + G++P L LDLS
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLP-------VLGTLDLSH 86
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 144
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
KL L+L+NN L +L L L N L
Sbjct: 145 TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ N L +P N L +L + L NSL
Sbjct: 150 LEKLSLANNNL-TELPAGLLNGLENLDTLLLQENSL 184
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 491 DLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550
+L+ + G +PV L L L+ NQL +PL +L L LD+S N+L+S
Sbjct: 66 ELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
++ L +L L L N+ P L +L L++N L E+P
Sbjct: 118 GALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELP 164
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + +G +A+K + Q + ++ + LNE L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 99
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 156
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLT-TILKDDAAAKEFGWNQRMNVIKGVANA 874
++H +I++ S+ ++V E++D L I+K A + + ++ + A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 875 LSYLHHDCLPPIVHGDISSKNVLLDSEHEA---HVSDFGIAKFLNPHSSNWTAFAGTFGY 931
L Y H + I+H D+ +NVLL S+ + + DFG+A L GT +
Sbjct: 143 LRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHF 199
Query: 932 AAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964
APE+ + DV GV+ ++ G P
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 36/285 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDE---FLNEVLALTEIRHR-NII 822
+G+G G V +A+ A + + + E A E ++E+ L I H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 823 KFHGFCSNAQHSF-IVSEYLDRGSLTTILKDD-------AAAKEFGWNQRMNVIK----- 869
G C+ ++ E+ G+L+T L+ A E + + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 870 -GVANALSYL-HHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAF 925
VA + +L C +H D++++N+LL ++ + DFG+A+ + +P
Sbjct: 192 FQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 926 AGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQ 984
+ APE T + DV SFGVL E+ G P V + F + E
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGT- 305
Query: 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029
R+ P + ++++ C P RPT ++ L
Sbjct: 306 ----RMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 342
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 117 IPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKL 172
+P +I NLS LR LDL +N+L+ +P E+G L+ YF +++ ++P E G L
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYF-FDNMVTTLPWEFGNL 315
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 472 NIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS 531
N +P EI + S L+VLDLS N + +P + F L K + + +P EFG+
Sbjct: 257 NSLTELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQL-KYFYFFDNMVTTLPWEFGN 314
Query: 532 LTELQYLDLSANKLSSSIPK 551
L LQ+L + N L K
Sbjct: 315 LCNLQFLGVEGNPLEKQFLK 334
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 213 IPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLF 272
+P + NL++L +LDLS N+L S+P L + L Y + N + +P GNL +L
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLKYFYFFDN-MVTTLPWEFGNLCNLQ 319
Query: 273 ELDLSENQL 281
L + N L
Sbjct: 320 FLGVEGNPL 328
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Query: 129 ALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGR 188
ALDL N Q+ I I L LY + N L +P EI LS + VL L HN +
Sbjct: 228 ALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLTS- 284
Query: 189 IPPSLGXXXXXXXXXXXXXXXFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG 248
+P LG ++P GNL +L L + N L L S G
Sbjct: 285 LPAELG-SCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTG 343
Query: 249 ILYLYKN 255
+++ ++
Sbjct: 344 LIFYLRD 350
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + +G +A+K + Q + ++ + LNE L +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 99
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 156
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + W GT Y APEI
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 83/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 34 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRAELTKL--QVDGTLPVLGTLDLSHNQ 88
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 89 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 124
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N+L+ + + L L + + EN
Sbjct: 125 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 184 LYT-IPKGF 191
Score = 33.5 bits (75), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 72 VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329
L N+L P + L +SL NN+L+ LE L L L N L
Sbjct: 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMN-----NIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + G++P L LDLS
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLP-------VLGTLDLSH 86
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 144
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
KL L+L+NN L +L L L N L
Sbjct: 145 TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ N L +P N L +L + L NSL
Sbjct: 150 LEKLSLANNNL-TELPAGLLNGLENLDTLLLQENSL 184
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 491 DLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550
+L+ + G +PV L L L+ NQL +PL +L L LD+S N+L+S
Sbjct: 66 ELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
++ L +L L L N+ P L +L L++N L E+P
Sbjct: 118 GALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELP 164
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 83/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 34 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRAELTKL--QVDGTLPVLGTLDLSHNQ 88
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 89 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 124
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N+L+ + + L L + + EN
Sbjct: 125 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 184 LYT-IPKGF 191
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 72 VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329
L N+L P + L +SL NN+L+ LE L L L N L
Sbjct: 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMN-----NIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + G++P L LDLS
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLP-------VLGTLDLSH 86
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 144
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
KL L+L+NN L +L L L N L
Sbjct: 145 TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ N L +P N L +L + L NSL
Sbjct: 150 LEKLSLANNNL-TELPAGLLNGLENLDTLLLQENSL 184
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 491 DLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550
+L+ + G +PV L L L+ NQL +PL +L L LD+S N+L+S
Sbjct: 66 ELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
++ L +L L L N+ P L +L L++N L E+P
Sbjct: 118 GALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELP 164
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 82/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 34 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRCELTKL--QVDGTLPVLGTLDLSHNQ 88
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 89 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 124
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N L+ + + L L + + EN
Sbjct: 125 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENS 183
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 184 LYT-IPKGF 191
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNA-----SMNNIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + + G++P L LDLS
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-------VLGTLDLSH 86
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 144
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
KL L+L+NNQ L +L L L N L
Sbjct: 145 TPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ NQL +P N L +L + L NSL
Sbjct: 150 LEKLSLANNQL-TELPAGLLNGLENLDTLLLQENSL 184
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 71 QVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129
Query: 275 DLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329
L N+L P + L +SL NN L+ LE L L L N L
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 50/202 (24%)
Query: 381 IPHSIGNLTKLVLVNMCENHLFGLIPK-SFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439
+P S+ + T L+++ N+L L + + LT+L L + N+L EAF PNL
Sbjct: 33 VPQSLPSYT--ALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNL 90
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499
+LDLS N+L+ F D L+VL L +NHIV
Sbjct: 91 RYLDLSSNHLHTLDEF------------------------LFSDLQALEVLLLYNNHIVV 126
Query: 500 KIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKL 559
FE + L KL L+ NQ+S P+E + K L KL
Sbjct: 127 VDRNAFEDMAQLQKLYLSQNQISR-FPVE--------------------LIKDGNKLPKL 165
Query: 560 HYLNLSNNQFNHKIP-TEFEKL 580
L+LS+N+ K+P T+ +KL
Sbjct: 166 MLLDLSSNKLK-KLPLTDLQKL 186
Score = 37.0 bits (84), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 213 IPNVMGNLNSLS-ILDLSQNQL-RGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
+PNV +L S + +LDLS N L R ++ L+NL L L N L + +
Sbjct: 30 LPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPN 89
Query: 271 LFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD 330
L LDLS N L FS+L +L ++ L+NN + ++ L +L L NQ+
Sbjct: 90 LRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149
Query: 331 GVIPPSIGNLSSLRTLYLYD 350
I + + L L L D
Sbjct: 150 RFPVELIKDGNKLPKLMLLD 169
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCEN 399
L++L +L L N + + +L L+L NHL + +L L ++ + N
Sbjct: 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNN 122
Query: 400 HLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDH---PNLTFLDLSQNNL 449
H+ + +F ++ L++L +QN + E D P L LDLS N L
Sbjct: 123 HIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 364 LKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423
L +L L L NHL+ + + + L +++ NHL L F +L +LE L N
Sbjct: 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNN 122
Query: 424 NLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGD 483
++ AF D L L LSQN ++ F + +P
Sbjct: 123 HIVVVDRNAFEDMAQLQKLYLSQN--------------QISRFPVELIKDGNKLP----- 163
Query: 484 SSKLQVLDLSSNHIVGKIPV-QFEKL--FSLNKLILNLNQLSGGVPLEFGSLTELQYLDL 540
KL +LDLSSN + K+P+ +KL + N L L+ N L L + + QY L
Sbjct: 164 --KLMLLDLSSNKL-KKLPLTDLQKLPAWVKNGLYLHNNPLECDCKL-YQLFSHWQYRQL 219
Query: 541 SA 542
S+
Sbjct: 220 SS 221
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 210 FGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLK 269
F +PN L LDLS N L F ++L L +L LY N + + ++
Sbjct: 84 FVPVPN-------LRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMA 136
Query: 270 SLFELDLSENQLFGSIPLSF----SNLSSLTLMSLFNNSLSGSIPPTQ-GNLEALSELGL 324
L +L LS+NQ+ P+ + L L L+ L +N L +P T L A + GL
Sbjct: 137 QLQKLYLSQNQI-SRFPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGL 194
Query: 325 YIN 327
Y++
Sbjct: 195 YLH 197
Score = 33.9 bits (76), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 489 VLDLSSNHIVGKIPVQFE--KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
+LDLS N++ ++ ++ +L +L+ L+L+ N L+ F + L+YLDLS+N L
Sbjct: 43 LLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLH 101
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
+ +L L L L NN FE + L +L LS N
Sbjct: 102 TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN 146
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 82/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 34 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRCELTKL--QVDGTLPVLGTLDLSHNQ 88
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 89 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 124
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N L+ + + L L + + EN
Sbjct: 125 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENS 183
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 184 LYT-IPKGF 191
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNA-----SMNNIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + + G++P L LDLS
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-------VLGTLDLSH 86
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 144
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
KL L+L+NNQ L +L L L N L
Sbjct: 145 TPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ NQL +P N L +L + L NSL
Sbjct: 150 LEKLSLANNQL-TELPAGLLNGLENLDTLLLQENSL 184
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 71 QVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129
Query: 275 DLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
L N+L P + L +SL NN L+
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 117/292 (40%), Gaps = 33/292 (11%)
Query: 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378
+ EL L L+G +P I ++SL+ L L N F L SL L +
Sbjct: 279 VQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYI------ 331
Query: 379 GVIPHSIGNLTKLVLVNMCENHLFGL---------IPKS------FRNLTSLERLRFNQN 423
GN+ KL L C L L I S +NL L+ L + N
Sbjct: 332 ------KGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYN 385
Query: 424 NLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN-WRNFPKLGTFNASMNNIYGSIPPEIG 482
G +AF + P L LD++ +L+ + + ++N L N S + S +
Sbjct: 386 EPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLA 445
Query: 483 DSSKLQVLDLSSNHIV-GKIPVQ--FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLD 539
L+ L+L N G I + + SL LIL+ L F L + +LD
Sbjct: 446 GLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLD 505
Query: 540 LSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591
LS N L+ ++ +L L YLN+++N P L S ++LSHN
Sbjct: 506 LSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPALSQQSIINLSHN 556
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 14/265 (5%)
Query: 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI---GNLTKLVLVNMCE 398
S+ ++ L + F L + + +L+L HL+G +P I +L KLVL
Sbjct: 254 SVESINLQKHRFSDLSSSTFRCFTRVQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSF 312
Query: 399 NHLFGLIPKSFRNLTSLE-RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNW 457
+ L + SF +L L + + +L + E NL LDLS +++ N
Sbjct: 313 DQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKL---ENLQKLDLSHSDIEASDCCNL 369
Query: 458 --RNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQ-FEKLFSLNKL 514
+N L N S N G + +L++LD++ H+ K P F+ L L L
Sbjct: 370 QLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVL 429
Query: 515 ILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS-SIPKS--MGNLSKLHYLNLSNNQFNH 571
L+ L L +L++L+L N SI K+ + + L L LS+
Sbjct: 430 NLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLS 489
Query: 572 KIPTEFEKLIHLSELDLSHNFLQGE 596
F L +++ LDLSHN L G+
Sbjct: 490 IDQQAFHGLRNVNHLDLSHNSLTGD 514
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 125/313 (39%), Gaps = 59/313 (18%)
Query: 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGV-IPHS--IGNLTKLVLVNMCEN 399
L+ L+L G L + L++L L L NH+S + +P + NL L N +
Sbjct: 106 LKHLFLTQTGISNLEFIPVHNLENLESLHLGSNHISSINLPENFPTQNLKVLDFQNNAIH 165
Query: 400 HLFGLIPKSFRNLTSLERLRFNQNNLFG--------KVYEA--FGDHPNL--TFLDLSQN 447
++ S T+L L FN N++ G K++++ FG NL F L +
Sbjct: 166 YISRKDTNSLEQATNLS-LNFNGNDIKGIEPGAFISKIFQSLKFGGSLNLFIIFKGLQNS 224
Query: 448 NLYG----------EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-----SKLQVLDL 492
L + F L + N+ ++ S +++Q LDL
Sbjct: 225 TLQSLWLGTFEDTDDQYLTSATFEGLCDMSVESINLQKHRFSDLSSSTFRCFTRVQELDL 284
Query: 493 SSNHIVGKIPVQFEKLFSLNKLILNLNQL-------SGGVP-------------LEFGS- 531
++ H+ G +P E + SL KL+LN N + P L+ G+
Sbjct: 285 TAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTR 343
Query: 532 ----LTELQYLDLSANKLSSS--IPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSE 585
L LQ LDLS + + +S + NL L YLNLS N+ F++ L
Sbjct: 344 CLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLEL 403
Query: 586 LDLSHNFLQGEIP 598
LD++ L + P
Sbjct: 404 LDVAFTHLHVKAP 416
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+++D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 133/326 (40%), Gaps = 59/326 (18%)
Query: 277 SENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336
+++ FG ++ +N +T + L ++ + +E L+ L I ++D +
Sbjct: 32 TQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTY---A 88
Query: 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNM 396
+++ LY+ N L P+ + L+ L L RN LS + N KL ++M
Sbjct: 89 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148
Query: 397 CENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN 456
N+L + +F+ TSL+ L+ + N LT +DLS
Sbjct: 149 SNNNLERIEDDTFQATTSLQNLQLSSN--------------RLTHVDLSL---------- 184
Query: 457 WRNFPKLGTFNASMNNIYG-SIPPEIGDSSKLQVLDLSSNHI-VGKIPVQFEKLFSLNKL 514
P L N S N + +IP + + LD S N I V + PV E L L
Sbjct: 185 ---IPSLFHANVSYNLLSTLAIPIAVEE------LDASHNSINVVRGPVNVE----LTIL 231
Query: 515 ILNLNQLSGGV-PLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQ----- 568
L N L+ L + L E +DLS N+L + + +L L +SNN+
Sbjct: 232 KLQHNNLTDTAWLLNYPGLVE---VDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALN 288
Query: 569 -FNHKIPTEFEKLIHLSELDLSHNFL 593
+ IPT L LDLSHN L
Sbjct: 289 LYGQPIPT-------LKVLDLSHNHL 307
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 128/306 (41%), Gaps = 46/306 (15%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
++ + + +L+L+ Q+ ++ A + LY+ N++ P V N+ L L
Sbjct: 64 LLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123
Query: 276 LSENQLFGSIPLS-FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIP 334
L N L S+P F N LT +S+ NN+L T +L L L N+L V
Sbjct: 124 LERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-- 180
Query: 335 PSIGNLSSLRTLYLYDNGFYGLVP---------------NEIGYLK-----SLSKLELCR 374
+LS + +L+ + N Y L+ N I ++ L+ L+L
Sbjct: 181 ----DLSLIPSLF-HANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQH 235
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN-----NLFGKV 429
N+L+ + N LV V++ N L ++ F + LERL + N NL+G+
Sbjct: 236 NNLTDTA--WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQP 293
Query: 430 YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQV 489
P L LDLS N+L + N F +L N+I + ++ L+
Sbjct: 294 I------PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI---VTLKLSTHHTLKN 343
Query: 490 LDLSSN 495
L LS N
Sbjct: 344 LTLSHN 349
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 35/283 (12%)
Query: 253 YKNSLFGFIPS-VIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPP 311
+KNS +P+ ++ + + + L+L++ Q+ +F+ ++ + + N++ P
Sbjct: 52 FKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH 111
Query: 312 TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLE 371
N+ L+ L L N L + N L TL + +N + + SL L+
Sbjct: 112 VFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171
Query: 372 LCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL-IPKSFRNLTS---------------L 415
L N L+ V + + L N+ N L L IP + L + L
Sbjct: 172 LSSNRLTHV---DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL 228
Query: 416 ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMN---- 471
L+ NNL + ++P L +DLS N L + + +L S N
Sbjct: 229 TILKLQHNNLTDTAW--LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA 286
Query: 472 -NIYGSIPPEIGDSSKLQVLDLSSNHI--VGKIPVQFEKLFSL 511
N+YG P L+VLDLS NH+ V + QF++L +L
Sbjct: 287 LNLYGQPIP------TLKVLDLSHNHLLHVERNQPQFDRLENL 323
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 34/148 (22%)
Query: 886 IVHGDISSKNVLLDSEHE-AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA-----HM 939
+VH DI +N+L+D A + DFG L H +T F GT Y+ PE H
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALL--HDEPYTDFDGTRVYSPPEWISRHQYHA 217
Query: 940 MRATEKYDVHSFGVLALEVIKGNHP--RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997
+ AT V S G+L +++ G+ P RD + L+ L P+
Sbjct: 218 LPAT----VWSLGILLYDMVCGDIPFERD----------------QEILEAELHFPAHVS 257
Query: 998 MDKLMSIMEVAILCLVESPEARPTMKKV 1025
D I CL P +RP+++++
Sbjct: 258 PDCCALIRR----CLAPKPSSRPSLEEI 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + + +G +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY G + + L+ E + R + +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+++D + V+DFG AK + W GT Y APEI
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 99/254 (38%), Gaps = 38/254 (14%)
Query: 751 YEEIIKAI-------DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQ 803
YE+I+K I +D+ IG+G G V + K S+ + +D
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 804 DEFLNEVLALTEIRHRNIIKFHG-------FCS--NAQHSFIVSEYLDRGSLTTILKDDA 854
F E R+I+ F FC+ + ++ ++V EY+ G L ++ +
Sbjct: 120 AFFWEE---------RDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD 170
Query: 855 AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA-K 913
+++ V+ AL +H L +H D+ N+LLD ++DFG K
Sbjct: 171 VPEKWAKFYTAEVVL----ALDAIHSMGL---IHRDVKPDNMLLDKHGHLKLADFGTCMK 223
Query: 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKY----DVHSFGVLALEVIKGNHPRDYVS 969
+ GT Y +PE+ Y D S GV E++ G+ P Y
Sbjct: 224 MDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF-YAD 282
Query: 970 TNFSSFSNMITEIN 983
+ ++S ++ N
Sbjct: 283 SLVGTYSKIMDHKN 296
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 10/160 (6%)
Query: 808 NEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNV 867
E++ +RH NI++F H IV EY G L + A F ++
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI---CNAGRFSEDEARFF 120
Query: 868 IKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH--VSDFGIAKFLNPHSSNWTAF 925
+ + + +SY H + H D+ +N LLD + FG +K HS
Sbjct: 121 FQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT- 176
Query: 926 AGTFGYAAPEIAHMMRATEKY-DVHSFGVLALEVIKGNHP 964
GT Y APE+ K DV S GV ++ G +P
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 82/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 34 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRCELTKL--QVDGTLPVLGTLDLSHNQ 88
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 89 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 124
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N L+ + + L L + + EN
Sbjct: 125 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENS 183
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 184 LYT-IPKGF 191
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNA-----SMNNIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + + G++P L LDLS
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-------VLGTLDLSH 86
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 144
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
KL L+L+NNQ L +L L L N L
Sbjct: 145 TPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ NQL +P N L +L + L NSL
Sbjct: 150 LEKLSLANNQL-TELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 71 QVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129
Query: 275 DLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
L N+L P + L +SL NN L+
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 36/280 (12%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDE---FLNEVLALTEI-RHRNII 822
+G+G G V +A+ A + + + E A E ++E+ L I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 823 KFHGFCSNAQHSF-IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKG----------- 870
G C+ ++ E+ G+L+T L+ + EF + ++ K
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 871 --VANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL--NPHSSNWTAFA 926
VA + +L +H D++++N+LL ++ + DFG+A+ + +P
Sbjct: 155 FQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 927 GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985
+ APE T + DV SFGVL E+ G P V + F + E
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKE---- 266
Query: 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
R+ P + ++++ C P RPT ++
Sbjct: 267 -GTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 301
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 133/326 (40%), Gaps = 59/326 (18%)
Query: 277 SENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336
+++ FG ++ +N +T + L ++ + +E L+ L I ++D +
Sbjct: 38 TQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTY---A 94
Query: 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNM 396
+++ LY+ N L P+ + L+ L L RN LS + N KL ++M
Sbjct: 95 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154
Query: 397 CENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN 456
N+L + +F+ TSL+ L+ + N LT +DLS
Sbjct: 155 SNNNLERIEDDTFQATTSLQNLQLSSN--------------RLTHVDLSL---------- 190
Query: 457 WRNFPKLGTFNASMNNIYG-SIPPEIGDSSKLQVLDLSSNHI-VGKIPVQFEKLFSLNKL 514
P L N S N + +IP + + LD S N I V + PV E L L
Sbjct: 191 ---IPSLFHANVSYNLLSTLAIPIAVEE------LDASHNSINVVRGPVNVE----LTIL 237
Query: 515 ILNLNQLSGGV-PLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQ----- 568
L N L+ L + L E +DLS N+L + + +L L +SNN+
Sbjct: 238 KLQHNNLTDTAWLLNYPGLVE---VDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALN 294
Query: 569 -FNHKIPTEFEKLIHLSELDLSHNFL 593
+ IPT L LDLSHN L
Sbjct: 295 LYGQPIPT-------LKVLDLSHNHL 313
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 119/284 (41%), Gaps = 43/284 (15%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
++ + + +L+L+ Q+ ++ A + LY+ N++ P V N+ L L
Sbjct: 70 LLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129
Query: 276 LSENQLFGSIPLS-FSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIP 334
L N L S+P F N LT +S+ NN+L T +L L L N+L V
Sbjct: 130 LERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-- 186
Query: 335 PSIGNLSSLRTLYLYDNGFYGLVP---------------NEIGYLK-----SLSKLELCR 374
+LS + +L+ + N Y L+ N I ++ L+ L+L
Sbjct: 187 ----DLSLIPSLF-HANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQH 241
Query: 375 NHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN-----NLFGKV 429
N+L+ + N LV V++ N L ++ F + LERL + N NL+G+
Sbjct: 242 NNLTDTA--WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQP 299
Query: 430 YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNI 473
P L LDLS N+L + N F +L N+I
Sbjct: 300 I------PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 336
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 36/297 (12%)
Query: 239 FSLANLSNLGILYLYKNSLFGFIPS-VIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTL 297
F L+N I+ +KNS +P+ ++ + + + L+L++ Q+ +F+ ++
Sbjct: 45 FEDITLNNQKIV-TFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQK 103
Query: 298 MSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV 357
+ + N++ P N+ L+ L L N L + N L TL + +N +
Sbjct: 104 LYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 163
Query: 358 PNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL-IPKSFRNLTS-- 414
+ SL L+L N L+ V + + L N+ N L L IP + L +
Sbjct: 164 DDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASH 220
Query: 415 -------------LERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFP 461
L L+ NNL + ++P L +DLS N L + +
Sbjct: 221 NSINVVRGPVNVELTILKLQHNNLTDTAW--LLNYPGLVEVDLSYNELEKIMYHPFVKMQ 278
Query: 462 KLGTFNASMN-----NIYGSIPPEIGDSSKLQVLDLSSNHI--VGKIPVQFEKLFSL 511
+L S N N+YG P L+VLDLS NH+ V + QF++L +L
Sbjct: 279 RLERLYISNNRLVALNLYGQPIP------TLKVLDLSHNHLLHVERNQPQFDRLENL 329
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 30/276 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDE---FLNEVLALTEI-RHRNII 822
+G+G G V +A+ A + + + E A E ++E+ L I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 823 KFHGFCSNAQHSF-IVSEYLDRGSLTTILKD---------DAAAKEFGWNQRMNVIKGVA 872
G C+ ++ E+ G+L+T L+ D + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAFAGTFG 930
+ +L +H D++++N+LL ++ + DFG+A+ + +P
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989
+ APE T + DV SFGVL E+ G P V + F + E R
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFXRRLKE-----GTR 265
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ P + ++++ C P RPT ++
Sbjct: 266 MRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 297
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 82/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 34 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRCELTKL--QVDGTLPVLGTLDLSHNQ 88
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 89 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 124
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N L+ + + L L + + EN
Sbjct: 125 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENS 183
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 184 LYT-IPKGF 191
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 71 QVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129
Query: 275 DLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329
L N+L P + L +SL NN L+ LE L L L N L
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNASMN-----NIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + G++P L LDLS
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-------VLGTLDLSH 86
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 144
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
KL L+L+NN L +L L L N L
Sbjct: 145 TPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
L LSEN L+ + + LT ++L L+ G L L L L NQL +
Sbjct: 36 LHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKL--QVDGTLPVLGTLDLSHNQLQSL- 92
Query: 334 PPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLE---LCRNHLSGVIPHSIGNLTK 390
P +G +L L + D F L +G L+ L +L+ L N L + P + K
Sbjct: 93 -PLLG--QTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 391 LVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDH 436
L +++ N L L L +L+ L +N+L+ FG H
Sbjct: 150 LEKLSLANNDLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSH 195
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ N L +P N L +L + L NSL
Sbjct: 150 LEKLSLANNDL-TELPAGLLNGLENLDTLLLQENSL 184
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS 546
L +L+ + G +PV L L L+ NQL +PL +L L LD+S N+L+
Sbjct: 62 LDRCELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT 113
Query: 547 SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
S ++ L +L L L N+ P L +L L++N L E+P
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLT-ELP 164
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 82/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 34 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRCELTKL--QVDGTLPVLGTLDLSHNQ 88
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 89 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 124
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N L+ + + L L + + EN
Sbjct: 125 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENS 183
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 184 LYT-IPKGF 191
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNA-----SMNNIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + + G++P L LDLS
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-------VLGTLDLSH 86
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 144
Query: 554 GNLSKLHYLNLSNNQFNH 571
KL L+L+NNQ
Sbjct: 145 TPTPKLEKLSLANNQLTE 162
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ NQL +P N L +L + L NSL
Sbjct: 150 LEKLSLANNQL-TELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 71 QVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129
Query: 275 DLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
L N+L P + L +SL NN L+
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 83/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 35 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRCELTKL--QVDGTLPVLGTLDLSHNQ 89
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 90 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 125
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N+L+ + + L L + + EN
Sbjct: 126 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 184
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 185 LYT-IPKGF 192
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 216 VMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELD 275
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 73 VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 131
Query: 276 LSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306
L N+L P + L +SL NN+L+
Sbjct: 132 LKGNELKTLPPGLLTPTPKLEKLSLANNNLT 162
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNA-----SMNNIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + + G++P L LDLS
Sbjct: 35 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-------VLGTLDLSH 87
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 88 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 145
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
KL L+L+NN L +L L L N L
Sbjct: 146 TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 185
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 92 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 150
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ N L +P N L +L + L NSL
Sbjct: 151 LEKLSLANNNL-TELPAGLLNGLENLDTLLLQENSL 185
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 491 DLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550
+L+ + G +PV L L L+ NQL +PL +L L LD+S N+L+S
Sbjct: 67 ELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 118
Query: 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
++ L +L L L N+ P L +L L++N L E+P
Sbjct: 119 GALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELP 165
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
NL +L L L N++ P + A L L LYL KN L +P + K+L EL + E
Sbjct: 74 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEKMP--KTLQELRVHE 130
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
N++ F+ L+ + ++ L N L S G + + +L YI D
Sbjct: 131 NEITKVRKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKKLS-YIRIAD-------T 181
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398
N++++ GL P SL++L L N ++ V S+ L L + +
Sbjct: 182 NITTIPQ---------GLPP-------SLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 225
Query: 399 NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
N + + S N L L N N L KV DH + + L NN+
Sbjct: 226 NSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 296 TLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYG 355
L+ L NN ++ NL+ L L L N++ + P + L L LYL N
Sbjct: 55 ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE 114
Query: 356 LVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL--FGLIPKSFRNLT 413
L P ++ K+L +L + N ++ V L ++++V + N L G+ +F+ +
Sbjct: 115 L-PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 171
Query: 414 SLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNI 473
L +R N+ G P+LT L L N + + + + L S N+I
Sbjct: 172 KLSYIRIADTNI---TTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 228
Query: 474 YGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502
+ ++ L+ L L++N +V K+P
Sbjct: 229 SAVDNGSLANTPHLRELHLNNNKLV-KVP 256
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 9/226 (3%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
LDL N++ F NL +L + L NN +S P L L L L NQL +
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-L 115
Query: 334 PPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL--SGVIPHSIGNLTKL 391
P + +L+ L +++N + + L + +EL N L SG+ + + KL
Sbjct: 116 PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 173
Query: 392 VLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451
+ + + ++ IP+ SL L + N + + NL L LS N++
Sbjct: 174 SYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230
Query: 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI 497
+ + N P L + + NN +P + D +QV+ L +N+I
Sbjct: 231 VDNGSLANTPHLRELHLN-NNKLVKVPGGLADHKYIQVVYLHNNNI 275
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 525 VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS 584
VP + T L LDL NK++ NL LH L L NN+ + P F L+ L
Sbjct: 46 VPKDLPPDTAL--LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103
Query: 585 ELDLSHNFLQGEIPPQI 601
L LS N L+ E+P ++
Sbjct: 104 RLYLSKNQLK-ELPEKM 119
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 214 PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFE 273
P L L L LS+NQL+ +P + L L +++N + SV L +
Sbjct: 93 PGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIV 149
Query: 274 LDLSENQLFGS---------------IPLSFSNLS--------SLTLMSLFNNSLSGSIP 310
++L N L S I ++ +N++ SLT + L N ++
Sbjct: 150 VELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDA 209
Query: 311 PTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKL 370
+ L L++LGL N + V S+ N LR L+L +N VP + K + +
Sbjct: 210 ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVV 268
Query: 371 ELCRNHLSGV 380
L N++S +
Sbjct: 269 YLHNNNISAI 278
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 38/195 (19%)
Query: 470 MNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEF 529
+ + +PP+ +LDL +N I F+ L +L+ LIL N++S P F
Sbjct: 43 LEKVPKDLPPDTA------LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF 96
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLS 589
L +L+ L LS N+L +P+ M L L + N+ + F L + ++L
Sbjct: 97 APLVKLERLYLSKNQL-KELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153
Query: 590 HNFLQGEIPPQICXXXXXXXXXXXXXXXFDLIPGCFEEMRSLSRIDIAYNEL----QGPI 645
N L+ + G F+ M+ LS I IA + QG
Sbjct: 154 TNPLKSS----------------------GIENGAFQGMKKLSYIRIADTNITTIPQGLP 191
Query: 646 PNSTAFKDGLMEGNK 660
P+ T ++GNK
Sbjct: 192 PSLTELH---LDGNK 203
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 219 NLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSE 278
NL +L L L N++ P + A L L LYL KN L +P + K+L EL + E
Sbjct: 74 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEKMP--KTLQELRVHE 130
Query: 279 NQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338
N++ F+ L+ + ++ L N L S G + + +L YI D
Sbjct: 131 NEITKVRKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKKLS-YIRIAD-------T 181
Query: 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398
N++++ GL P SL++L L N ++ V S+ L L + +
Sbjct: 182 NITTIPQ---------GLPP-------SLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 225
Query: 399 NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNL 449
N + + S N L L N N L KV DH + + L NN+
Sbjct: 226 NSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 296 TLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYG 355
L+ L NN ++ NL+ L L L N++ + P + L L LYL N
Sbjct: 55 ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE 114
Query: 356 LVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL--FGLIPKSFRNLT 413
L P ++ K+L +L + N ++ V L ++++V + N L G+ +F+ +
Sbjct: 115 L-PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 171
Query: 414 SLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNI 473
L +R N+ G P+LT L L N + + + + L S N+I
Sbjct: 172 KLSYIRIADTNI---TTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 228
Query: 474 YGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502
+ ++ L+ L L++N +V K+P
Sbjct: 229 SAVDNGSLANTPHLRELHLNNNKLV-KVP 256
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 9/226 (3%)
Query: 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333
LDL N++ F NL +L + L NN +S P L L L L NQL +
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-L 115
Query: 334 PPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL--SGVIPHSIGNLTKL 391
P + +L+ L +++N + + L + +EL N L SG+ + + KL
Sbjct: 116 PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 173
Query: 392 VLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451
+ + + ++ IP+ SL L + N + + NL L LS N++
Sbjct: 174 SYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230
Query: 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI 497
+ + N P L + + NN +P + D +QV+ L +N+I
Sbjct: 231 VDNGSLANTPHLRELHLN-NNKLVKVPGGLADHKYIQVVYLHNNNI 275
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 525 VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS 584
VP + T L LDL NK++ NL LH L L NN+ + P F L+ L
Sbjct: 46 VPKDLPPDTAL--LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103
Query: 585 ELDLSHNFLQGEIPPQI 601
L LS N L+ E+P ++
Sbjct: 104 RLYLSKNQLK-ELPEKM 119
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 214 PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFE 273
P L L L LS+NQL+ +P + L L +++N + SV L +
Sbjct: 93 PGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIV 149
Query: 274 LDLSENQLFGS---------------IPLSFSNLS--------SLTLMSLFNNSLSGSIP 310
++L N L S I ++ +N++ SLT + L N ++
Sbjct: 150 VELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDA 209
Query: 311 PTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKL 370
+ L L++LGL N + V S+ N LR L+L +N VP + K + +
Sbjct: 210 ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVV 268
Query: 371 ELCRNHLSGV 380
L N++S +
Sbjct: 269 YLHNNNISAI 278
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 470 MNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEF 529
+ + +PP+ +LDL +N I F+ L +L+ LIL N++S P F
Sbjct: 43 LEKVPKDLPPDTA------LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF 96
Query: 530 GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLS 589
L +L+ L LS N+L +P+ M L L + N+ + F L + ++L
Sbjct: 97 APLVKLERLYLSKNQL-KELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153
Query: 590 HNFLQ 594
N L+
Sbjct: 154 TNPLK 158
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 30/276 (10%)
Query: 767 IGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDE---FLNEVLALTEI-RHRNII 822
+G+G G V +A+ A + + + E A E ++E+ L I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 823 KFHGFCSNAQHSF-IVSEYLDRGSLTTILKDDAAA--------KEFGWNQRMNVIK-GVA 872
G C+ ++ E+ G+L+T L+ K+F + + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 873 NALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAFAGTFG 930
+ +L +H D++++N+LL ++ + DFG+A+ + +P
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 931 YAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989
+ APE T + DV SFGVL E+ G P V + F + E R
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKE-----GTR 265
Query: 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025
+ P + ++++ C P RPT ++
Sbjct: 266 MRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSEL 297
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI 816
+D F +G G G V + SG +A+K + Q + ++ + LNE L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAV 98
Query: 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS 876
++K + + ++V EY+ G + + L+ F +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFE 155
Query: 877 YLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936
YLH L ++ D+ +N+L+D + V+DFG AK + + W GT Y AP I
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WX-LCGTPEYLAPAI 209
Query: 937 AHMMRATEKYDVHSFGVLALEVIKGNHP 964
+ D + GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 83/189 (43%), Gaps = 34/189 (17%)
Query: 224 SILDLSQNQLRGSIPFSLANL---SNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280
+IL LS+N L FSLA L + L L L + L V G L L LDLS NQ
Sbjct: 34 TILHLSENLLYT---FSLATLMPYTRLTQLNLDRCELTKL--QVDGTLPVLGTLDLSHNQ 88
Query: 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340
L S+PL L +LT++ + N L+ S+P L AL LG
Sbjct: 89 L-QSLPLLGQTLPALTVLDVSFNRLT-SLP-----LGALRGLG----------------- 124
Query: 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400
L+ LYL N L P + L KL L N+L+ + + L L + + EN
Sbjct: 125 -ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183
Query: 401 LFGLIPKSF 409
L+ IPK F
Sbjct: 184 LYT-IPKGF 191
Score = 33.1 bits (74), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Query: 215 NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFEL 274
V G L L LDLS NQL+ S+P L L +L + N L + L L EL
Sbjct: 71 QVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129
Query: 275 DLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329
L N+L P + L +SL NN+L+ LE L L L N L
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 440 TFLDLSQNNLYGEISFNWRNFPKLGTFNA-----SMNNIYGSIPPEIGDSSKLQVLDLSS 494
T L LS+N LY + +L N + + G++P L LDLS
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-------VLGTLDLSH 86
Query: 495 NHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSM 553
N + +P+ + L +L L ++ N+L+ +PL L ELQ L L N+L + P +
Sbjct: 87 NQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLL 144
Query: 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFL 593
KL L+L+NN L +L L L N L
Sbjct: 145 TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 491 DLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550
+L+ + G +PV L L L+ NQL +PL +L L LD+S N+L+S
Sbjct: 66 ELTKLQVDGTLPV-------LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIP 598
++ L +L L L N+ P L +L L++N L E+P
Sbjct: 118 GALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELP 164
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 212 SIPNVMGNLNSLSILDLSQNQLRGSIPF-SLANLSNLGILYLYKNSLFGFIPSVIGNLKS 270
S+P + L +L++LD+S N+L S+P +L L L LYL N L P ++
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 271 LFELDLSENQLFGSIPLSFSN-LSSLTLMSLFNNSL 305
L +L L+ N L +P N L +L + L NSL
Sbjct: 150 LEKLSLANNNL-TELPAGLLNGLENLDTLLLQENSL 184
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 13/146 (8%)
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
+H D++++N+LL ++ + DFG+A+ + +P + APE T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 945 KYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
+ DV SFGVL E+ G P V + F + E R+ P + +
Sbjct: 275 QSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGT-----RMRAPDYTTPEMYQT 328
Query: 1004 IMEVAILCLVESPEARPTMKKVCNLL 1029
+++ C P RPT ++ L
Sbjct: 329 MLD----CWHGEPSQRPTFSELVEHL 350
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 13/146 (8%)
Query: 887 VHGDISSKNVLLDSEHEAHVSDFGIAK--FLNPHSSNWTAFAGTFGYAAPEIAHMMRATE 944
+H D++++N+LL ++ + DFG+A+ + +P + APE T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 945 KYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMS 1003
+ DV SFGVL E+ G P V + F + E R+ P + +
Sbjct: 273 QSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGT-----RMRAPDYTTPEMYQT 326
Query: 1004 IMEVAILCLVESPEARPTMKKVCNLL 1029
+++ C P RPT ++ L
Sbjct: 327 MLD----CWHGEPSQRPTFSELVEHL 348
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,255,736
Number of Sequences: 62578
Number of extensions: 1150491
Number of successful extensions: 5954
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 578
Number of HSP's that attempted gapping in prelim test: 2835
Number of HSP's gapped (non-prelim): 1804
length of query: 1031
length of database: 14,973,337
effective HSP length: 109
effective length of query: 922
effective length of database: 8,152,335
effective search space: 7516452870
effective search space used: 7516452870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)