Query 043316
Match_columns 1031
No_of_seqs 1050 out of 6702
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 06:00:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043316.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043316hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1E-89 3.4E-94 859.2 36.6 637 20-674 5-750 (768)
2 3rgz_A Protein brassinosteroid 100.0 8.2E-72 2.8E-76 697.5 28.4 562 76-643 100-741 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2.3E-64 7.9E-69 624.7 36.6 569 77-646 26-626 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-63 5.4E-68 617.2 38.3 579 82-664 10-624 (680)
5 4eco_A Uncharacterized protein 100.0 4.5E-62 1.6E-66 595.4 19.1 495 24-570 27-600 (636)
6 3j0a_A TOLL-like receptor 5; m 100.0 1.7E-59 5.7E-64 592.4 36.4 532 82-647 10-565 (844)
7 3t6q_A CD180 antigen; protein- 100.0 7E-60 2.4E-64 576.6 31.8 521 101-646 33-564 (606)
8 4ecn_A Leucine-rich repeat pro 100.0 3.6E-59 1.2E-63 577.5 28.1 511 22-594 264-864 (876)
9 3j0a_A TOLL-like receptor 5; m 100.0 3.9E-58 1.3E-62 579.9 32.8 517 65-620 14-562 (844)
10 3vq2_A TLR4, TOLL-like recepto 100.0 1.8E-58 6.1E-63 564.1 28.0 535 82-647 17-563 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 3.6E-57 1.2E-61 552.6 34.1 533 62-622 4-562 (606)
12 3t6q_A CD180 antigen; protein- 100.0 4.3E-57 1.5E-61 551.9 34.6 523 67-620 14-562 (606)
13 4eco_A Uncharacterized protein 100.0 9.7E-54 3.3E-58 521.9 14.9 467 101-621 81-603 (636)
14 2z63_A TOLL-like receptor 4, v 100.0 2.5E-52 8.6E-57 506.1 26.2 512 103-648 9-537 (570)
15 2z81_A CD282 antigen, TOLL-lik 100.0 7.6E-52 2.6E-56 499.4 27.1 490 64-621 3-513 (549)
16 2z63_A TOLL-like receptor 4, v 100.0 2.6E-51 8.8E-56 497.3 30.2 489 101-622 28-535 (570)
17 2z81_A CD282 antigen, TOLL-lik 100.0 2.3E-51 7.9E-56 495.2 22.4 489 126-647 6-515 (549)
18 4ecn_A Leucine-rich repeat pro 100.0 2.4E-51 8.3E-56 507.6 20.9 488 101-642 323-864 (876)
19 4asz_A BDNF/NT-3 growth factor 100.0 2.2E-50 7.4E-55 440.2 19.3 254 759-1030 13-285 (299)
20 4gt4_A Tyrosine-protein kinase 100.0 7.1E-50 2.4E-54 438.1 21.4 256 759-1031 26-303 (308)
21 4aoj_A High affinity nerve gro 100.0 1.1E-49 3.7E-54 440.9 22.8 254 759-1030 41-315 (329)
22 4fih_A Serine/threonine-protei 100.0 2.6E-50 8.9E-55 444.4 17.7 249 759-1027 74-323 (346)
23 4b9d_A Serine/threonine-protei 100.0 2.9E-50 9.9E-55 444.7 17.8 252 759-1027 24-276 (350)
24 3omv_A RAF proto-oncogene seri 100.0 1.3E-49 4.5E-54 433.6 22.3 256 759-1030 36-296 (307)
25 2z7x_B TOLL-like receptor 1, v 100.0 3.7E-50 1.3E-54 481.0 19.3 458 128-646 3-485 (520)
26 2z7x_B TOLL-like receptor 1, v 100.0 2.6E-49 8.8E-54 473.7 22.9 451 104-620 3-483 (520)
27 4g8a_A TOLL-like receptor 4; l 100.0 2.3E-48 7.7E-53 477.9 31.7 511 101-644 52-582 (635)
28 4aw0_A HPDK1, 3-phosphoinositi 100.0 2E-49 6.9E-54 430.6 17.9 248 759-1025 32-282 (311)
29 4fie_A Serine/threonine-protei 100.0 4.4E-49 1.5E-53 445.3 18.8 249 759-1027 151-400 (423)
30 3hyh_A Carbon catabolite-derep 100.0 1.5E-48 5.3E-53 418.2 20.4 249 758-1027 12-262 (275)
31 3fpq_A Serine/threonine-protei 100.0 1.6E-48 5.5E-53 422.0 20.2 245 762-1027 29-282 (290)
32 4g3f_A NF-kappa-beta-inducing 100.0 3.1E-49 1.1E-53 434.6 14.4 249 758-1030 57-312 (336)
33 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-48 3.9E-53 425.1 13.7 249 759-1027 24-281 (304)
34 3hmm_A TGF-beta receptor type- 100.0 7.9E-48 2.7E-52 423.4 19.8 262 759-1031 3-294 (303)
35 4ase_A Vascular endothelial gr 100.0 6E-48 2E-52 430.3 16.9 257 758-1030 63-343 (353)
36 4g31_A Eukaryotic translation 100.0 5E-47 1.7E-51 414.6 19.3 251 758-1027 4-279 (299)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8E-47 2.7E-51 456.0 21.3 461 104-646 34-514 (562)
38 4g8a_A TOLL-like receptor 4; l 100.0 2.3E-45 7.9E-50 451.1 32.5 536 48-619 12-581 (635)
39 1ogq_A PGIP-2, polygalacturona 100.0 1.1E-45 3.7E-50 410.6 19.9 295 23-331 2-306 (313)
40 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.8E-45 1.3E-49 441.3 24.0 453 79-620 34-512 (562)
41 4b99_A Mitogen-activated prote 100.0 3.6E-44 1.2E-48 407.1 21.0 258 759-1027 54-344 (398)
42 4f9c_A Cell division cycle 7-r 100.0 6.9E-44 2.3E-48 400.6 18.0 202 754-970 16-252 (361)
43 1jl5_A Outer protein YOPM; leu 100.0 8.9E-44 3.1E-48 414.9 19.0 424 99-626 9-437 (454)
44 1jl5_A Outer protein YOPM; leu 100.0 3.3E-43 1.1E-47 410.0 22.3 420 147-646 9-433 (454)
45 3v47_A TOLL-like receptor 5B a 100.0 6.7E-43 2.3E-47 410.8 24.5 387 62-502 5-412 (455)
46 3v5w_A G-protein coupled recep 100.0 4E-43 1.4E-47 413.4 20.4 252 758-1027 188-449 (689)
47 3uto_A Twitchin; kinase, muscl 100.0 1.1E-42 3.9E-47 414.7 20.2 252 758-1027 156-410 (573)
48 3v47_A TOLL-like receptor 5B a 100.0 7.2E-42 2.5E-46 402.1 23.3 389 104-550 13-412 (455)
49 3uim_A Brassinosteroid insensi 100.0 2.8E-41 9.5E-46 378.4 20.6 281 746-1031 17-308 (326)
50 3p86_A Serine/threonine-protei 100.0 1.9E-41 6.6E-46 375.8 18.8 256 758-1030 36-294 (309)
51 3fxz_A Serine/threonine-protei 100.0 5.4E-41 1.8E-45 370.3 19.6 249 759-1027 20-269 (297)
52 3s95_A LIMK-1, LIM domain kina 100.0 2.8E-40 9.6E-45 367.4 23.0 253 759-1030 10-278 (310)
53 2c30_A Serine/threonine-protei 100.0 3.5E-40 1.2E-44 367.9 22.4 261 747-1027 23-294 (321)
54 2qkw_B Protein kinase; three-h 100.0 2.8E-40 9.7E-45 369.3 20.9 269 753-1030 33-311 (321)
55 1o6l_A RAC-beta serine/threoni 100.0 5.7E-40 1.9E-44 367.4 23.2 251 758-1027 4-260 (337)
56 2psq_A Fibroblast growth facto 100.0 4.8E-40 1.6E-44 374.0 22.4 256 759-1031 81-361 (370)
57 3fe3_A MAP/microtubule affinit 100.0 2.9E-40 1E-44 368.8 19.8 249 758-1027 14-264 (328)
58 2nru_A Interleukin-1 receptor- 100.0 1.6E-39 5.5E-44 360.8 24.7 277 747-1031 13-303 (307)
59 3bz5_A Internalin-J, INLJ; leu 100.0 1.8E-39 6.3E-44 378.8 25.1 188 97-306 38-225 (457)
60 2yab_A Death-associated protei 100.0 8.9E-40 3E-44 369.2 21.6 254 759-1027 12-272 (361)
61 3zgw_A Maternal embryonic leuc 100.0 4.2E-40 1.4E-44 369.5 18.5 249 758-1027 9-260 (347)
62 3soc_A Activin receptor type-2 100.0 4.4E-40 1.5E-44 367.6 18.6 262 759-1031 24-315 (322)
63 3niz_A Rhodanese family protei 100.0 1.2E-39 4.1E-44 362.0 21.9 261 758-1027 20-300 (311)
64 3c0i_A Peripheral plasma membr 100.0 4.7E-40 1.6E-44 371.6 18.9 258 758-1027 23-286 (351)
65 3q4u_A Activin receptor type-1 100.0 6.8E-40 2.3E-44 362.7 19.7 258 758-1031 7-299 (301)
66 4dc2_A Protein kinase C IOTA t 100.0 5.8E-40 2E-44 373.9 19.0 251 758-1022 51-307 (396)
67 3soa_A Calcium/calmodulin-depe 100.0 9.9E-40 3.4E-44 378.5 21.2 255 757-1027 9-267 (444)
68 4euu_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 360.3 24.5 263 759-1029 9-304 (319)
69 3kul_A Ephrin type-A receptor 100.0 1.6E-39 5.4E-44 363.3 21.4 254 758-1030 48-309 (325)
70 1tki_A Titin; serine kinase, m 100.0 9.3E-40 3.2E-44 364.2 19.3 251 758-1027 4-257 (321)
71 4hcu_A Tyrosine-protein kinase 100.0 1.2E-39 4.1E-44 354.4 19.7 252 759-1031 10-263 (269)
72 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.7E-40 1.9E-44 369.9 17.7 252 757-1027 21-280 (353)
73 4eqm_A Protein kinase; transfe 100.0 7.5E-40 2.6E-44 360.7 17.9 258 759-1031 11-272 (294)
74 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.2E-39 7.4E-44 352.2 21.1 252 759-1031 8-261 (268)
75 3qd2_B Eukaryotic translation 100.0 2.9E-39 9.8E-44 363.0 22.3 252 757-1027 4-325 (332)
76 3bz5_A Internalin-J, INLJ; leu 100.0 4.3E-39 1.5E-43 375.6 24.2 221 134-379 27-247 (457)
77 3dtc_A Mitogen-activated prote 100.0 1.1E-39 3.6E-44 355.3 17.6 256 759-1031 7-270 (271)
78 3a8x_A Protein kinase C IOTA t 100.0 1.9E-39 6.5E-44 364.9 20.1 250 759-1022 9-264 (345)
79 2y0a_A Death-associated protei 100.0 2.6E-39 9.1E-44 361.7 21.1 255 758-1027 10-271 (326)
80 3o0g_A Cell division protein k 100.0 2E-39 6.7E-44 357.3 19.4 261 759-1027 2-282 (292)
81 2zv2_A Calcium/calmodulin-depe 100.0 2.6E-39 9E-44 357.4 20.2 253 758-1027 12-292 (298)
82 2bdw_A Hypothetical protein K1 100.0 1.7E-39 5.7E-44 368.2 18.6 255 756-1027 26-284 (362)
83 1ob3_A PFPK5, cell division co 100.0 2.2E-39 7.7E-44 356.0 19.1 260 759-1027 2-280 (288)
84 2qol_A Ephrin receptor; recept 100.0 2.6E-39 8.9E-44 368.2 20.2 253 759-1030 45-305 (373)
85 3a62_A Ribosomal protein S6 ki 100.0 2.4E-39 8.3E-44 362.2 19.5 252 758-1027 16-276 (327)
86 1xjd_A Protein kinase C, theta 100.0 1.3E-39 4.5E-44 365.4 17.1 252 756-1026 14-268 (345)
87 3tki_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 361.9 18.4 252 758-1027 6-261 (323)
88 3cbl_A C-FES, proto-oncogene t 100.0 1.4E-39 4.7E-44 371.6 17.0 254 758-1030 113-370 (377)
89 4fr4_A YANK1, serine/threonine 100.0 7.8E-39 2.7E-43 363.4 23.0 252 759-1027 15-271 (384)
90 3vhe_A Vascular endothelial gr 100.0 9.1E-40 3.1E-44 371.5 15.1 263 752-1030 15-351 (359)
91 3lb7_A RAF proto-oncogene seri 100.0 1E-38 3.5E-43 353.7 23.0 256 759-1030 36-296 (307)
92 1fot_A TPK1 delta, CAMP-depend 100.0 8.3E-39 2.8E-43 355.4 22.0 248 758-1027 5-258 (318)
93 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.8E-39 6.1E-44 362.9 16.5 249 758-1027 8-258 (336)
94 1o6v_A Internalin A; bacterial 100.0 2.5E-38 8.6E-43 372.3 26.8 302 99-451 44-345 (466)
95 2i0e_A Protein kinase C-beta I 100.0 5.3E-39 1.8E-43 361.7 19.9 252 757-1027 18-276 (353)
96 3gen_A Tyrosine-protein kinase 100.0 5.5E-39 1.9E-43 352.0 19.4 252 758-1030 23-276 (283)
97 1o6v_A Internalin A; bacterial 100.0 3.2E-38 1.1E-42 371.4 27.3 346 170-594 43-388 (466)
98 1rdq_E PKA C-alpha, CAMP-depen 100.0 9.9E-39 3.4E-43 359.6 21.6 247 759-1027 41-293 (350)
99 3kn6_A Ribosomal protein S6 ki 100.0 3.1E-39 1.1E-43 360.8 17.1 248 764-1027 16-270 (325)
100 3tt0_A Basic fibroblast growth 100.0 8.5E-39 2.9E-43 365.9 21.0 256 759-1031 69-349 (382)
101 2ivs_A Proto-oncogene tyrosine 100.0 1E-38 3.5E-43 355.6 20.8 257 758-1031 22-308 (314)
102 3l9p_A Anaplastic lymphoma kin 100.0 6.1E-39 2.1E-43 364.7 19.1 255 759-1030 71-341 (367)
103 2eva_A TAK1 kinase - TAB1 chim 100.0 7.6E-39 2.6E-43 355.0 19.3 251 759-1030 8-259 (307)
104 1luf_A Muscle-specific tyrosin 100.0 6.5E-39 2.2E-43 362.0 19.1 258 757-1031 45-332 (343)
105 3ugc_A Tyrosine-protein kinase 100.0 6.4E-39 2.2E-43 353.8 18.3 258 759-1031 10-288 (295)
106 2izr_A Casein kinase I isoform 100.0 2.5E-39 8.5E-44 363.0 15.1 254 759-1030 9-277 (330)
107 1kob_A Twitchin; kinase, intra 100.0 1E-38 3.6E-43 363.7 20.2 252 758-1027 50-304 (387)
108 2r5t_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 364.4 17.6 250 758-1026 37-288 (373)
109 1t46_A HOMO sapiens V-KIT hard 100.0 6E-39 2.1E-43 357.2 17.7 257 759-1031 23-304 (313)
110 4f0f_A Serine/threonine-protei 100.0 2.7E-38 9.3E-43 347.3 22.7 255 759-1031 19-286 (287)
111 3gxj_A TGF-beta receptor type- 100.0 5.9E-40 2E-44 363.5 9.4 257 759-1031 3-294 (303)
112 2pmi_A Negative RE, cyclin-dep 100.0 8.2E-39 2.8E-43 356.5 18.5 262 758-1027 4-293 (317)
113 3hko_A Calcium/calmodulin-depe 100.0 1.2E-38 4.1E-43 360.1 19.9 262 755-1027 22-330 (345)
114 2w4o_A Calcium/calmodulin-depe 100.0 9.2E-39 3.1E-43 360.6 18.9 250 758-1027 52-305 (349)
115 3cok_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 348.6 18.6 252 758-1027 10-262 (278)
116 1qcf_A Haematopoetic cell kina 100.0 9.7E-39 3.3E-43 373.7 19.3 253 758-1031 187-441 (454)
117 4aw2_A Serine/threonine-protei 100.0 6.1E-39 2.1E-43 370.4 17.3 264 751-1027 66-338 (437)
118 1rjb_A FL cytokine receptor; k 100.0 8.9E-39 3.1E-43 360.9 18.0 257 758-1030 44-330 (344)
119 2x4f_A Myosin light chain kina 100.0 1.4E-38 4.8E-43 361.9 19.5 249 761-1027 91-342 (373)
120 2y94_A 5'-AMP-activated protei 100.0 3.2E-38 1.1E-42 368.1 23.0 249 759-1027 16-266 (476)
121 3mdy_A Bone morphogenetic prot 100.0 4.6E-38 1.6E-42 354.0 23.6 264 755-1031 33-328 (337)
122 3v8s_A RHO-associated protein 100.0 7.1E-39 2.4E-43 367.0 17.1 259 753-1027 63-329 (410)
123 3uc3_A Serine/threonine-protei 100.0 2.4E-38 8.4E-43 358.7 21.1 252 758-1027 19-274 (361)
124 3kmu_A ILK, integrin-linked ki 100.0 1.3E-38 4.4E-43 346.6 18.0 251 759-1031 10-267 (271)
125 1k9a_A Carboxyl-terminal SRC k 100.0 3.1E-38 1.1E-42 368.8 22.5 248 758-1030 192-441 (450)
126 1opk_A P150, C-ABL, proto-onco 100.0 1.6E-38 5.3E-43 375.4 20.0 254 758-1031 219-475 (495)
127 4eut_A Serine/threonine-protei 100.0 2.2E-38 7.5E-43 364.2 20.5 264 759-1030 9-305 (396)
128 3fdn_A Serine/threonine-protei 100.0 3E-38 1E-42 345.3 20.6 249 758-1027 8-257 (279)
129 3qup_A Tyrosine-protein kinase 100.0 1.8E-38 6.3E-43 355.0 19.2 258 758-1031 22-295 (323)
130 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.8E-38 9.5E-43 372.5 21.6 252 759-1022 185-438 (543)
131 2a2a_A Death-associated protei 100.0 2.9E-38 1E-42 352.9 20.7 255 758-1027 11-272 (321)
132 3t9t_A Tyrosine-protein kinase 100.0 1.8E-38 6E-43 344.8 18.4 252 759-1031 8-261 (267)
133 3poz_A Epidermal growth factor 100.0 1.6E-38 5.6E-43 355.7 18.7 252 759-1030 15-274 (327)
134 1mp8_A Focal adhesion kinase 1 100.0 2.6E-38 8.9E-43 346.2 19.9 253 758-1030 14-272 (281)
135 4ejn_A RAC-alpha serine/threon 100.0 9E-39 3.1E-43 373.5 17.1 251 758-1027 147-404 (446)
136 2pvf_A Fibroblast growth facto 100.0 3.1E-38 1.1E-42 354.8 20.7 256 759-1031 35-315 (334)
137 4agu_A Cyclin-dependent kinase 100.0 1.5E-38 5.1E-43 353.7 17.7 261 758-1027 2-284 (311)
138 3gni_B Strad alpha; kinase fol 100.0 2.2E-38 7.6E-43 363.8 19.6 264 758-1027 24-333 (389)
139 2acx_A G protein-coupled recep 100.0 2.3E-38 8E-43 373.5 20.1 256 758-1027 183-444 (576)
140 2wqm_A Serine/threonine-protei 100.0 3E-38 1E-42 351.1 19.9 262 758-1031 31-294 (310)
141 3f3z_A Calcium/calmodulin-depe 100.0 3.7E-38 1.3E-42 344.2 20.2 250 758-1027 8-261 (277)
142 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-38 4.1E-43 358.0 16.7 252 757-1027 20-277 (342)
143 2v62_A Serine/threonine-protei 100.0 1.7E-38 5.9E-43 358.3 18.1 265 759-1031 37-325 (345)
144 3ork_A Serine/threonine protei 100.0 3.9E-39 1.3E-43 358.3 12.4 254 759-1027 12-273 (311)
145 2vd5_A DMPK protein; serine/th 100.0 1.2E-38 4.1E-43 365.4 16.6 263 751-1027 53-327 (412)
146 3dbq_A Dual specificity protei 100.0 1.7E-38 5.8E-43 358.1 17.6 250 759-1027 9-273 (343)
147 2eue_A Carbon catabolite derep 100.0 2.7E-38 9.1E-43 345.0 18.4 248 759-1027 13-262 (275)
148 4e5w_A Tyrosine-protein kinase 100.0 3.4E-38 1.2E-42 349.2 19.5 259 759-1031 21-299 (302)
149 1csn_A Casein kinase-1; phosph 100.0 4.8E-38 1.7E-42 347.3 20.6 255 759-1030 10-279 (298)
150 3og7_A AKAP9-BRAF fusion prote 100.0 2.9E-38 9.9E-43 347.3 18.6 257 759-1031 24-285 (289)
151 1b6c_B TGF-B superfamily recep 100.0 7E-38 2.4E-42 353.3 22.2 263 753-1031 36-333 (342)
152 2i1m_A Macrophage colony-stimu 100.0 1.9E-38 6.7E-43 356.4 17.6 257 758-1030 45-322 (333)
153 3kk8_A Calcium/calmodulin depe 100.0 3.3E-38 1.1E-42 346.0 18.9 253 758-1027 5-261 (284)
154 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.8E-38 9.7E-43 369.3 19.5 253 758-1031 183-437 (452)
155 2h34_A Serine/threonine-protei 100.0 2.2E-38 7.5E-43 351.7 17.6 259 756-1030 31-292 (309)
156 3is5_A Calcium-dependent prote 100.0 2.8E-38 9.5E-43 346.6 17.7 252 759-1027 22-278 (285)
157 3kfa_A Tyrosine-protein kinase 100.0 3.8E-38 1.3E-42 346.3 18.7 253 758-1030 12-267 (288)
158 1p4o_A Insulin-like growth fac 100.0 1.5E-38 5.1E-43 355.6 15.7 258 757-1031 23-296 (322)
159 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.5E-38 8.5E-43 354.5 17.1 262 756-1027 31-318 (329)
160 3ttj_A Mitogen-activated prote 100.0 8.5E-38 2.9E-42 365.4 22.3 257 758-1027 61-355 (464)
161 3op5_A Serine/threonine-protei 100.0 2.7E-38 9.3E-43 359.5 17.6 262 758-1030 34-325 (364)
162 1qpc_A LCK kinase; alpha beta 100.0 6.4E-38 2.2E-42 342.8 19.9 251 759-1030 13-265 (279)
163 2w5a_A Serine/threonine-protei 100.0 2E-38 6.9E-43 346.8 15.8 256 758-1029 5-269 (279)
164 2yex_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 340.2 21.6 253 757-1027 5-261 (276)
165 4fvq_A Tyrosine-protein kinase 100.0 4.4E-38 1.5E-42 345.9 18.5 247 759-1031 8-272 (289)
166 3dls_A PAS domain-containing s 100.0 1.8E-38 6.3E-43 356.0 15.5 246 757-1027 22-274 (335)
167 2zmd_A Dual specificity protei 100.0 4.3E-38 1.5E-42 360.4 18.8 250 759-1027 56-320 (390)
168 2rku_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42 345.8 19.2 250 759-1027 15-265 (294)
169 3kex_A Receptor tyrosine-prote 100.0 3.2E-38 1.1E-42 353.1 17.0 252 759-1030 13-272 (325)
170 3bhy_A Death-associated protei 100.0 7.1E-38 2.4E-42 343.2 19.3 254 759-1027 5-265 (283)
171 2xir_A Vascular endothelial gr 100.0 3.3E-38 1.1E-42 351.8 16.6 262 753-1030 21-306 (316)
172 3mtl_A Cell division protein k 100.0 2.5E-38 8.6E-43 353.7 15.7 259 759-1027 2-281 (324)
173 3p1a_A MYT1 kinase, membrane-a 100.0 4.3E-38 1.5E-42 349.6 17.4 246 759-1027 57-304 (311)
174 2owb_A Serine/threonine-protei 100.0 6.3E-38 2.1E-42 352.2 18.8 251 758-1027 40-291 (335)
175 3a7i_A MST3 kinase, serine/thr 100.0 1.8E-37 6E-42 343.7 22.1 248 759-1027 22-270 (303)
176 3i6u_A CDS1, serine/threonine- 100.0 6.3E-38 2.1E-42 362.6 19.2 256 757-1027 133-399 (419)
177 3g33_A Cell division protein k 100.0 7E-38 2.4E-42 347.7 18.7 264 757-1027 7-296 (308)
178 3lxl_A Tyrosine-protein kinase 100.0 6.1E-38 2.1E-42 351.3 18.4 257 759-1030 23-299 (327)
179 1ua2_A CAK, cell division prot 100.0 5.7E-38 1.9E-42 354.3 18.2 265 756-1027 7-291 (346)
180 3oz6_A Mitogen-activated prote 100.0 3.5E-38 1.2E-42 361.9 16.5 204 756-969 6-235 (388)
181 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-37 4.6E-42 346.9 20.7 254 761-1030 33-306 (318)
182 2id5_A Lingo-1, leucine rich r 100.0 1.5E-37 5.2E-42 367.3 22.2 304 101-452 32-335 (477)
183 1mqb_A Ephrin type-A receptor 100.0 1.6E-37 5.6E-42 348.4 21.2 254 759-1031 44-306 (333)
184 3c1x_A Hepatocyte growth facto 100.0 6.5E-38 2.2E-42 356.1 17.9 253 759-1030 89-351 (373)
185 2clq_A Mitogen-activated prote 100.0 1.5E-37 5.2E-42 342.8 20.4 252 760-1027 23-278 (295)
186 2ac3_A MAP kinase-interacting 100.0 7.3E-38 2.5E-42 349.0 18.0 256 759-1027 12-295 (316)
187 1u5q_A Serine/threonine protei 100.0 5.2E-38 1.8E-42 353.8 16.9 248 759-1027 54-305 (348)
188 2vgo_A Serine/threonine-protei 100.0 1.6E-37 5.5E-42 340.5 20.1 249 758-1027 13-262 (284)
189 3llt_A Serine/threonine kinase 100.0 1.4E-37 4.6E-42 353.6 20.2 256 757-1027 33-355 (360)
190 3brb_A Proto-oncogene tyrosine 100.0 1.6E-37 5.6E-42 345.7 20.4 259 757-1031 32-305 (313)
191 1u59_A Tyrosine-protein kinase 100.0 2E-37 6.8E-42 340.3 20.7 252 759-1030 9-268 (287)
192 1byg_A CSK, protein (C-termina 100.0 9.6E-38 3.3E-42 341.2 18.1 248 758-1030 20-269 (278)
193 1xbb_A Tyrosine-protein kinase 100.0 1.7E-37 5.8E-42 341.6 20.1 253 758-1030 15-275 (291)
194 4aaa_A Cyclin-dependent kinase 100.0 3.1E-38 1.1E-42 354.2 14.5 261 758-1027 24-306 (331)
195 3f66_A Hepatocyte growth facto 100.0 1.1E-37 3.9E-42 344.3 18.7 253 759-1030 25-287 (298)
196 3lzb_A Epidermal growth factor 100.0 9.6E-38 3.3E-42 349.2 18.3 253 759-1031 15-275 (327)
197 3pls_A Macrophage-stimulating 100.0 1.6E-37 5.4E-42 343.1 19.5 254 760-1031 22-284 (298)
198 1nxk_A MAP kinase-activated pr 100.0 7.2E-38 2.4E-42 359.6 17.2 252 758-1027 60-321 (400)
199 3lm5_A Serine/threonine-protei 100.0 9.2E-38 3.2E-42 349.6 17.6 263 750-1027 19-287 (327)
200 3cc6_A Protein tyrosine kinase 100.0 1.8E-37 6.3E-42 339.5 19.6 253 758-1030 11-269 (281)
201 1t4h_A Serine/threonine-protei 100.0 2.4E-37 8.1E-42 340.3 20.5 248 760-1027 27-282 (290)
202 2id5_A Lingo-1, leucine rich r 100.0 3E-37 1E-41 364.8 22.7 318 178-522 16-333 (477)
203 2y7j_A Phosphorylase B kinase 100.0 2.1E-37 7.3E-42 351.7 20.6 261 752-1027 87-359 (365)
204 2h6d_A 5'-AMP-activated protei 100.0 2.6E-37 9E-42 337.3 20.3 249 759-1027 11-261 (276)
205 3com_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 346.7 18.1 250 758-1027 28-278 (314)
206 3g2f_A Bone morphogenetic prot 100.0 7.6E-38 2.6E-42 352.1 16.4 262 758-1031 12-315 (336)
207 3mwu_A Calmodulin-domain prote 100.0 2.2E-37 7.6E-42 365.9 21.1 252 758-1027 21-276 (486)
208 3rp9_A Mitogen-activated prote 100.0 1.7E-37 5.7E-42 364.4 19.5 194 759-961 53-280 (458)
209 3n9x_A Phosphotransferase; mal 100.0 1.5E-37 5.3E-42 361.1 19.0 198 759-965 26-252 (432)
210 1fvr_A Tyrosine-protein kinase 100.0 1.8E-37 6E-42 347.6 18.7 254 759-1030 25-296 (327)
211 3pfq_A PKC-B, PKC-beta, protei 100.0 2.3E-37 8E-42 377.3 20.8 252 757-1027 339-597 (674)
212 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-37 3.6E-42 371.7 17.2 253 758-1031 266-520 (535)
213 1vzo_A Ribosomal protein S6 ki 100.0 8.7E-38 3E-42 353.7 15.4 257 758-1028 53-322 (355)
214 3nyv_A Calmodulin-domain prote 100.0 1.3E-37 4.3E-42 368.2 17.3 253 758-1027 25-281 (484)
215 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8E-38 2.7E-42 355.9 15.0 247 758-1030 64-335 (365)
216 1x8b_A WEE1HU, WEE1-like prote 100.0 4.2E-37 1.4E-41 338.0 20.1 248 757-1027 9-279 (289)
217 2ozo_A Tyrosine-protein kinase 100.0 4.7E-37 1.6E-41 371.3 22.3 250 761-1030 337-594 (613)
218 3lij_A Calcium/calmodulin depe 100.0 3.1E-37 1.1E-41 365.3 20.2 252 758-1027 36-291 (494)
219 3q5i_A Protein kinase; CDPK, m 100.0 3.4E-37 1.2E-41 365.9 20.6 255 757-1027 34-301 (504)
220 2yfx_A Tyrosine-protein kinase 100.0 3.2E-37 1.1E-41 345.5 19.1 255 759-1030 30-300 (327)
221 3eqc_A Dual specificity mitoge 100.0 2.2E-37 7.5E-42 351.8 18.1 254 759-1027 33-324 (360)
222 1cm8_A Phosphorylated MAP kina 100.0 2.9E-37 1E-41 350.6 19.0 255 759-1027 25-307 (367)
223 2jii_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 356.8 11.4 257 759-1030 42-332 (352)
224 2a19_B Interferon-induced, dou 100.0 5.2E-37 1.8E-41 336.5 20.2 245 757-1030 9-270 (284)
225 2wtk_C Serine/threonine-protei 100.0 7.7E-37 2.6E-41 338.9 21.7 253 758-1027 4-263 (305)
226 3uzp_A CKI-delta, CKID, casein 100.0 4.7E-37 1.6E-41 339.0 19.5 255 758-1030 8-276 (296)
227 3mi9_A Cell division protein k 100.0 4.7E-37 1.6E-41 347.8 20.0 260 758-1027 16-311 (351)
228 4hgt_A Casein kinase I isoform 100.0 4.2E-37 1.4E-41 339.4 19.0 257 757-1030 7-276 (296)
229 2buj_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 347.2 15.0 257 758-1030 28-302 (317)
230 2j7t_A Serine/threonine-protei 100.0 1E-37 3.6E-42 345.3 14.0 251 759-1027 19-275 (302)
231 2jam_A Calcium/calmodulin-depe 100.0 5.7E-37 2E-41 339.7 19.9 250 758-1027 8-261 (304)
232 2xrw_A Mitogen-activated prote 100.0 9.2E-37 3.1E-41 347.6 22.1 256 759-1027 25-318 (371)
233 2r3i_A Cell division protein k 100.0 5.2E-37 1.8E-41 339.2 19.4 262 758-1027 2-283 (299)
234 2ycf_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 343.8 18.6 256 757-1027 8-274 (322)
235 3byv_A Rhoptry kinase; malaria 100.0 5.1E-38 1.7E-42 359.0 11.4 244 759-1027 73-359 (377)
236 4fl3_A Tyrosine-protein kinase 100.0 5.8E-37 2E-41 371.3 20.4 246 765-1030 375-627 (635)
237 1u46_A ACK-1, activated CDC42 100.0 1.9E-37 6.4E-42 341.3 14.5 255 759-1030 18-280 (291)
238 2fst_X Mitogen-activated prote 100.0 4.7E-37 1.6E-41 348.5 18.1 254 759-1027 29-311 (367)
239 2w1i_A JAK2; chromosomal rearr 100.0 7.4E-37 2.5E-41 342.3 19.3 259 758-1031 40-319 (326)
240 2x7f_A TRAF2 and NCK-interacti 100.0 3.7E-37 1.3E-41 344.9 16.7 252 757-1027 22-286 (326)
241 3nsz_A CK II alpha, casein kin 100.0 1.4E-36 4.7E-41 340.9 21.3 252 759-1027 36-319 (330)
242 2vwi_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 344.6 12.7 259 758-1027 14-287 (303)
243 3fme_A Dual specificity mitoge 100.0 3.8E-37 1.3E-41 338.7 16.0 255 758-1027 6-266 (290)
244 2pml_X PFPK7, Ser/Thr protein 100.0 7.1E-37 2.4E-41 346.0 18.6 258 758-1027 30-322 (348)
245 1phk_A Phosphorylase kinase; g 100.0 8.4E-37 2.9E-41 337.4 18.3 255 758-1027 16-283 (298)
246 3o6n_A APL1; leucine-rich repe 100.0 1.2E-36 4.1E-41 349.7 20.0 310 99-452 43-354 (390)
247 3ll6_A Cyclin G-associated kin 100.0 4.5E-37 1.6E-41 345.9 15.7 250 759-1030 28-304 (337)
248 3oja_B Anopheles plasmodium-re 100.0 1.6E-36 5.4E-41 368.0 21.1 351 47-453 7-361 (597)
249 3q60_A ROP5B; pseudokinase, tr 100.0 2.7E-37 9.4E-42 352.2 13.6 254 759-1027 62-352 (371)
250 3kvw_A DYRK2, dual specificity 100.0 1.1E-36 3.7E-41 353.2 18.4 198 759-969 97-303 (429)
251 2wei_A Calmodulin-domain prote 100.0 1.7E-36 5.9E-41 332.8 18.6 255 755-1027 18-276 (287)
252 3pg1_A Mitogen-activated prote 100.0 8.1E-37 2.8E-41 347.4 16.0 270 750-1027 13-316 (362)
253 3qyz_A Mitogen-activated prote 100.0 1.7E-36 5.9E-41 344.7 18.7 257 759-1027 27-313 (364)
254 1zy4_A Serine/threonine-protei 100.0 2.6E-36 8.8E-41 334.2 19.6 251 757-1027 4-283 (303)
255 4fcg_A Uncharacterized protein 100.0 9.7E-37 3.3E-41 340.5 15.7 284 22-330 22-314 (328)
256 3rgf_A Cyclin-dependent kinase 100.0 8E-37 2.7E-41 352.6 15.4 201 759-969 20-240 (405)
257 4e7w_A Glycogen synthase kinas 100.0 1.2E-36 4.1E-41 349.1 16.6 256 759-1027 40-321 (394)
258 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.3E-37 2.2E-41 341.9 13.7 254 758-1031 32-299 (319)
259 3e3p_A Protein kinase, putativ 100.0 1.3E-36 4.3E-41 345.7 16.1 265 752-1027 16-314 (360)
260 3an0_A Dual specificity mitoge 100.0 8.2E-37 2.8E-41 344.2 14.2 254 758-1027 50-310 (340)
261 3sv0_A Casein kinase I-like; t 100.0 1.2E-36 4.2E-41 355.4 16.2 254 759-1030 7-274 (483)
262 3cek_A Dual specificity protei 100.0 2.2E-36 7.5E-41 336.5 17.2 252 757-1027 26-292 (313)
263 3eb0_A Putative uncharacterize 100.0 2.6E-36 8.9E-41 345.6 18.0 257 757-1027 5-321 (383)
264 4exu_A Mitogen-activated prote 100.0 3.1E-36 1.1E-40 343.2 18.4 254 759-1027 42-323 (371)
265 1wak_A Serine/threonine-protei 100.0 2E-36 6.8E-41 349.0 16.5 257 759-1027 37-391 (397)
266 2i6l_A Mitogen-activated prote 100.0 4.3E-36 1.5E-40 335.2 18.0 256 759-1027 11-305 (320)
267 1j1b_A Glycogen synthase kinas 100.0 5.1E-36 1.7E-40 346.8 19.1 255 759-1027 54-336 (420)
268 2rio_A Serine/threonine-protei 100.0 5.1E-36 1.7E-40 348.3 19.2 249 760-1027 16-295 (434)
269 2j0j_A Focal adhesion kinase 1 100.0 6.9E-36 2.4E-40 363.2 20.6 253 758-1030 389-647 (656)
270 2b9h_A MAP kinase FUS3, mitoge 100.0 3.7E-36 1.3E-40 340.8 16.9 256 759-1027 11-305 (353)
271 1blx_A Cyclin-dependent kinase 100.0 2.6E-36 9E-41 338.0 15.3 262 757-1027 9-296 (326)
272 3coi_A Mitogen-activated prote 100.0 8.5E-36 2.9E-40 337.6 19.5 254 759-1027 24-305 (353)
273 1z57_A Dual specificity protei 100.0 9.5E-36 3.2E-40 335.3 18.5 254 759-1027 14-328 (339)
274 3aln_A Dual specificity mitoge 100.0 4E-36 1.4E-40 336.6 14.1 256 759-1027 22-285 (327)
275 3a99_A Proto-oncogene serine/t 100.0 3.2E-36 1.1E-40 336.0 13.0 244 758-1027 42-293 (320)
276 3fhr_A MAP kinase-activated pr 100.0 6E-36 2E-40 336.0 15.3 252 758-1027 27-287 (336)
277 3p23_A Serine/threonine-protei 100.0 8.6E-36 3E-40 345.1 17.0 247 759-1027 24-283 (432)
278 2vx3_A Dual specificity tyrosi 100.0 1.1E-35 3.7E-40 340.3 17.0 201 758-969 53-262 (382)
279 2dyl_A Dual specificity mitoge 100.0 1.9E-35 6.6E-40 329.7 18.4 253 758-1027 24-283 (318)
280 3qa8_A MGC80376 protein; kinas 100.0 2.3E-36 8E-41 359.4 11.2 260 758-1025 13-295 (676)
281 2iwi_A Serine/threonine-protei 100.0 8.1E-36 2.8E-40 331.8 13.9 246 756-1027 28-283 (312)
282 1q8y_A SR protein kinase; tran 100.0 1.6E-35 5.6E-40 338.2 16.3 256 759-1027 19-333 (373)
283 2eu9_A Dual specificity protei 100.0 1.8E-35 6.2E-40 335.4 16.1 254 759-1027 19-333 (355)
284 1ogq_A PGIP-2, polygalacturona 100.0 6.5E-36 2.2E-40 331.8 11.4 249 101-376 50-302 (313)
285 3o6n_A APL1; leucine-rich repe 100.0 3.2E-35 1.1E-39 337.8 16.2 331 292-664 44-376 (390)
286 4fmz_A Internalin; leucine ric 100.0 1.7E-34 5.7E-39 326.4 21.7 307 97-450 40-346 (347)
287 4fmz_A Internalin; leucine ric 100.0 2.8E-34 9.6E-39 324.5 22.5 307 121-474 40-346 (347)
288 3oja_B Anopheles plasmodium-re 100.0 7.5E-35 2.6E-39 353.2 17.0 332 292-665 50-383 (597)
289 3uqc_A Probable conserved tran 100.0 9.4E-35 3.2E-39 317.9 14.6 231 759-1031 31-262 (286)
290 2ft3_A Biglycan; proteoglycan, 100.0 2.4E-33 8.2E-38 314.5 23.7 287 102-423 34-330 (332)
291 2ft3_A Biglycan; proteoglycan, 100.0 1.5E-33 5.3E-38 316.1 21.7 287 150-447 34-330 (332)
292 2pzi_A Probable serine/threoni 100.0 5.3E-34 1.8E-38 350.5 18.6 236 759-1029 80-323 (681)
293 2vuw_A Serine/threonine-protei 100.0 2E-34 6.7E-39 324.1 11.7 246 758-1026 19-329 (336)
294 1xku_A Decorin; proteoglycan, 100.0 5.1E-33 1.7E-37 311.7 22.6 200 101-306 52-253 (330)
295 3m2w_A MAP kinase-activated pr 100.0 1.1E-33 3.8E-38 312.3 16.0 229 759-1027 17-256 (299)
296 1xku_A Decorin; proteoglycan, 100.0 6.3E-33 2.2E-37 310.9 21.5 291 125-447 31-329 (330)
297 3dzo_A Rhoptry kinase domain; 100.0 1.1E-33 3.7E-38 326.4 13.6 244 759-1027 78-363 (413)
298 1z7x_W Ribonuclease inhibitor; 100.0 2.5E-35 8.4E-40 347.0 -11.5 359 197-594 3-411 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 8.4E-36 2.9E-40 351.0 -15.8 351 101-451 3-412 (461)
300 4fcg_A Uncharacterized protein 100.0 1.5E-32 5E-37 306.7 7.3 228 123-355 79-315 (328)
301 2z80_A TOLL-like receptor 2, v 100.0 1E-31 3.5E-36 304.1 12.7 284 61-380 26-316 (353)
302 3ogk_B Coronatine-insensitive 100.0 8.4E-34 2.9E-38 345.1 -8.9 449 64-542 41-547 (592)
303 2z66_A Variable lymphocyte rec 100.0 4.6E-31 1.6E-35 292.4 13.1 250 65-331 7-262 (306)
304 2z66_A Variable lymphocyte rec 100.0 7.7E-31 2.6E-35 290.6 11.5 248 104-379 10-262 (306)
305 3ogk_B Coronatine-insensitive 100.0 2.9E-32 9.8E-37 331.6 -1.4 258 141-421 65-350 (592)
306 1wwl_A Monocyte differentiatio 100.0 1.1E-31 3.9E-36 297.8 3.3 249 98-379 40-310 (312)
307 1wwl_A Monocyte differentiatio 100.0 4E-31 1.4E-35 293.4 5.5 254 120-404 38-311 (312)
308 2z80_A TOLL-like receptor 2, v 100.0 4.5E-30 1.5E-34 290.5 13.2 283 147-453 29-317 (353)
309 3g06_A SSPH2 (leucine-rich rep 100.0 4.5E-30 1.5E-34 307.9 13.6 299 47-413 10-308 (622)
310 3zyi_A Leucine-rich repeat-con 100.0 6.9E-29 2.4E-33 290.6 18.7 247 103-378 56-303 (452)
311 1ozn_A Reticulon 4 receptor; N 100.0 2.3E-29 7.9E-34 275.6 12.4 208 100-307 31-239 (285)
312 1ozn_A Reticulon 4 receptor; N 100.0 3.9E-29 1.3E-33 273.8 12.8 254 104-385 14-268 (285)
313 3zyi_A Leucine-rich repeat-con 100.0 4.5E-28 1.5E-32 283.7 18.9 226 174-401 76-302 (452)
314 3zyj_A Leucine-rich repeat-con 100.0 5.7E-28 1.9E-32 281.8 18.8 225 174-400 65-290 (440)
315 3zyj_A Leucine-rich repeat-con 100.0 5.3E-28 1.8E-32 282.1 18.5 227 101-377 64-291 (440)
316 4azs_A Methyltransferase WBDD; 99.9 2.9E-29 9.8E-34 299.2 3.2 188 767-964 242-437 (569)
317 3o53_A Protein LRIM1, AGAP0063 99.9 6.6E-29 2.2E-33 276.2 4.1 268 342-647 11-281 (317)
318 3g06_A SSPH2 (leucine-rich rep 99.9 1.4E-26 4.9E-31 277.5 23.3 263 125-431 40-302 (622)
319 3o53_A Protein LRIM1, AGAP0063 99.9 1.6E-28 5.6E-33 273.0 5.7 267 319-623 12-281 (317)
320 2o6q_A Variable lymphocyte rec 99.9 8.3E-27 2.9E-31 252.9 17.3 218 62-307 2-219 (270)
321 3oja_A Leucine-rich immune mol 99.9 7.7E-28 2.6E-32 283.2 7.2 234 100-347 33-268 (487)
322 3oja_A Leucine-rich immune mol 99.9 3.6E-28 1.2E-32 285.9 3.8 236 125-397 34-270 (487)
323 2p1m_B Transport inhibitor res 99.9 4.1E-29 1.4E-33 303.9 -7.2 452 105-616 47-542 (594)
324 2p1m_B Transport inhibitor res 99.9 2.4E-29 8.1E-34 306.0 -11.5 439 176-641 46-543 (594)
325 3rfs_A Internalin B, repeat mo 99.9 3.7E-26 1.3E-30 248.0 12.8 231 100-343 18-248 (272)
326 2z62_A TOLL-like receptor 4, v 99.9 1.6E-25 5.5E-30 243.8 16.9 206 101-307 28-238 (276)
327 2z62_A TOLL-like receptor 4, v 99.9 1.2E-25 4E-30 244.9 14.6 212 116-330 21-237 (276)
328 1p9a_G Platelet glycoprotein I 99.9 8.6E-25 2.9E-29 239.1 16.5 204 96-306 5-208 (290)
329 3rfs_A Internalin B, repeat mo 99.9 4.6E-25 1.6E-29 239.4 13.4 211 97-318 37-247 (272)
330 2o6q_A Variable lymphocyte rec 99.9 3.4E-24 1.2E-28 232.3 19.1 183 101-283 37-219 (270)
331 4glp_A Monocyte differentiatio 99.9 4.7E-25 1.6E-29 244.3 12.5 202 149-355 91-308 (310)
332 2ast_B S-phase kinase-associat 99.9 9.5E-27 3.3E-31 261.4 -2.4 266 63-338 35-314 (336)
333 3m19_A Variable lymphocyte rec 99.9 2.6E-24 9E-29 230.5 15.4 189 63-281 3-191 (251)
334 1p9a_G Platelet glycoprotein I 99.9 2.8E-24 9.5E-29 235.0 14.7 176 174-353 32-207 (290)
335 3en9_A Glycoprotease, O-sialog 99.9 7.6E-25 2.6E-29 259.7 9.9 187 762-965 339-538 (540)
336 3goz_A Leucine-rich repeat-con 99.9 5.6E-26 1.9E-30 257.6 0.0 254 105-358 2-301 (362)
337 2ca6_A RAN GTPase-activating p 99.9 1.1E-26 3.8E-31 266.1 -8.9 246 116-381 23-319 (386)
338 4glp_A Monocyte differentiatio 99.9 5.1E-24 1.7E-28 236.0 10.3 226 100-331 63-308 (310)
339 2ast_B S-phase kinase-associat 99.9 2.3E-25 7.9E-30 250.1 -1.1 255 102-387 48-315 (336)
340 2xwt_C Thyrotropin receptor; s 99.9 2.1E-23 7E-28 221.8 12.8 131 174-306 32-169 (239)
341 2ca6_A RAN GTPase-activating p 99.9 7.3E-26 2.5E-30 259.3 -7.6 256 127-406 11-320 (386)
342 3goz_A Leucine-rich repeat-con 99.9 4.2E-24 1.4E-28 242.1 6.5 269 322-612 3-313 (362)
343 2xwt_C Thyrotropin receptor; s 99.9 3.1E-23 1.1E-27 220.4 12.8 188 184-378 22-218 (239)
344 3cvr_A Invasion plasmid antige 99.9 1.2E-23 4.1E-28 249.0 9.0 213 49-314 33-251 (571)
345 1h6u_A Internalin H; cell adhe 99.9 7.7E-23 2.6E-27 225.9 13.4 193 98-306 38-230 (308)
346 3m19_A Variable lymphocyte rec 99.9 2.8E-22 9.4E-27 214.7 16.0 180 125-307 14-193 (251)
347 1h6u_A Internalin H; cell adhe 99.9 1E-22 3.6E-27 224.8 12.3 211 103-355 21-231 (308)
348 2o6s_A Variable lymphocyte rec 99.9 3.7E-22 1.3E-26 207.2 14.2 184 65-294 7-190 (208)
349 4ay9_X Follicle-stimulating ho 99.9 2.6E-22 9E-27 226.1 13.5 121 152-276 12-135 (350)
350 4ay9_X Follicle-stimulating ho 99.9 6E-22 2.1E-26 223.2 14.8 204 121-330 6-215 (350)
351 4b8c_D Glucose-repressible alc 99.9 4.3E-23 1.5E-27 253.7 4.2 242 22-303 127-369 (727)
352 3cvr_A Invasion plasmid antige 99.9 6.3E-22 2.2E-26 234.3 12.1 189 126-342 60-255 (571)
353 2o6s_A Variable lymphocyte rec 99.9 3.1E-21 1E-25 200.2 15.2 162 174-342 29-190 (208)
354 1zar_A RIO2 kinase; serine kin 99.9 8.7E-22 3E-26 213.8 11.0 156 753-939 84-253 (282)
355 1dce_A Protein (RAB geranylger 99.8 1.5E-22 5.3E-27 241.1 -4.0 188 98-308 346-548 (567)
356 3e6j_A Variable lymphocyte rec 99.8 7.2E-20 2.5E-24 192.7 15.2 159 60-234 14-172 (229)
357 1m9s_A Internalin B; cell inva 99.8 1.2E-20 3.9E-25 226.2 10.2 200 100-315 20-219 (605)
358 1h6t_A Internalin B; cell adhe 99.8 9.7E-21 3.3E-25 207.1 7.8 188 103-306 26-213 (291)
359 1m9s_A Internalin B; cell inva 99.8 5E-20 1.7E-24 220.6 12.7 182 97-292 39-220 (605)
360 1h6t_A Internalin B; cell adhe 99.8 6.2E-20 2.1E-24 200.7 11.2 173 97-283 42-214 (291)
361 1dce_A Protein (RAB geranylger 99.8 4.5E-22 1.5E-26 237.0 -6.6 149 186-356 398-548 (567)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 1.9E-19 6.5E-24 188.1 11.7 156 488-646 14-170 (220)
363 2v9t_B SLIT homolog 2 protein 99.8 1.8E-19 6E-24 188.4 11.4 153 488-643 14-166 (220)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 3.8E-19 1.3E-23 185.8 12.8 131 103-233 34-165 (220)
365 2xot_A Amphoterin-induced prot 99.8 2E-19 7E-24 203.3 11.3 154 127-281 41-201 (361)
366 2xot_A Amphoterin-induced prot 99.8 2.1E-19 7.2E-24 203.2 10.4 176 128-306 21-202 (361)
367 2v9t_B SLIT homolog 2 protein 99.8 5E-19 1.7E-23 184.9 12.2 79 105-186 15-93 (220)
368 1xeu_A Internalin C; cellular 99.8 9.8E-20 3.4E-24 195.8 6.9 171 99-284 17-187 (263)
369 3e6j_A Variable lymphocyte rec 99.8 8.8E-19 3E-23 184.3 12.8 156 487-646 21-176 (229)
370 4b8c_D Glucose-repressible alc 99.8 1.3E-19 4.4E-24 222.8 6.2 164 101-289 173-336 (727)
371 1xeu_A Internalin C; cellular 99.8 1.5E-19 5E-24 194.5 5.7 171 123-308 17-187 (263)
372 4ezg_A Putative uncharacterize 99.8 7.8E-19 2.7E-23 180.2 9.9 153 146-306 41-194 (197)
373 4ezg_A Putative uncharacterize 99.8 1.8E-18 6.1E-23 177.5 11.1 155 121-283 40-195 (197)
374 3sb4_A Hypothetical leucine ri 99.7 9.1E-19 3.1E-23 195.4 8.3 218 412-635 100-327 (329)
375 3sb4_A Hypothetical leucine ri 99.7 1.4E-18 4.8E-23 193.8 7.6 259 220-515 48-327 (329)
376 1zth_A RIO1 serine protein kin 99.7 1.3E-17 4.3E-22 178.8 10.6 141 760-915 48-219 (258)
377 1w8a_A SLIT protein; signaling 99.7 1.9E-17 6.4E-22 169.0 10.5 110 102-211 30-140 (192)
378 1w8a_A SLIT protein; signaling 99.7 4E-17 1.4E-21 166.5 11.3 128 104-234 11-139 (192)
379 2ell_A Acidic leucine-rich nuc 99.7 6.5E-17 2.2E-21 161.3 10.5 131 101-234 24-160 (168)
380 2ell_A Acidic leucine-rich nuc 99.7 1.6E-16 5.6E-21 158.3 10.1 133 124-258 23-160 (168)
381 4fdw_A Leucine rich hypothetic 99.7 5.3E-16 1.8E-20 176.6 14.5 264 341-641 113-382 (401)
382 2je0_A Acidic leucine-rich nuc 99.6 9.3E-17 3.2E-21 156.6 7.1 128 100-229 16-148 (149)
383 4fdw_A Leucine rich hypothetic 99.6 1.7E-15 5.9E-20 172.4 16.5 251 336-617 131-382 (401)
384 2wfh_A SLIT homolog 2 protein 99.6 5.1E-16 1.7E-20 158.2 10.6 127 513-643 14-140 (193)
385 2je0_A Acidic leucine-rich nuc 99.6 1.6E-16 5.5E-21 154.9 6.2 84 125-210 17-101 (149)
386 2wfh_A SLIT homolog 2 protein 99.6 1.4E-15 4.6E-20 155.1 12.2 107 102-209 32-138 (193)
387 1ds9_A Outer arm dynein; leuci 99.6 1E-17 3.4E-22 172.1 -4.1 135 99-238 16-157 (198)
388 2o6r_A Variable lymphocyte rec 99.6 1.6E-15 5.3E-20 152.6 10.4 132 512-646 10-141 (177)
389 4gyi_A RIO2 kinase; protein ki 99.6 5.7E-16 1.9E-20 171.6 7.7 143 760-916 96-266 (397)
390 1ds9_A Outer arm dynein; leuci 99.6 2.1E-17 7.1E-22 169.7 -3.9 155 121-306 14-185 (198)
391 2o6r_A Variable lymphocyte rec 99.6 3.3E-15 1.1E-19 150.2 11.9 134 65-213 7-140 (177)
392 4fs7_A Uncharacterized protein 99.6 3.2E-14 1.1E-18 162.7 17.0 66 257-324 59-124 (394)
393 1a9n_A U2A', U2A'; complex (nu 99.5 5.9E-15 2E-19 148.2 7.5 131 97-234 15-153 (176)
394 4fs7_A Uncharacterized protein 99.5 7.4E-14 2.5E-18 159.7 16.7 318 281-639 59-376 (394)
395 1a9n_A U2A', U2A'; complex (nu 99.5 7.5E-15 2.6E-19 147.4 7.0 132 121-282 15-153 (176)
396 3g39_A Variable lymphocyte rec 99.5 8.1E-14 2.8E-18 138.8 9.0 109 535-646 11-119 (170)
397 2r9u_A Variable lymphocyte rec 99.4 3.4E-13 1.2E-17 134.6 10.6 103 105-210 16-118 (174)
398 3g39_A Variable lymphocyte rec 99.4 4.2E-13 1.5E-17 133.5 11.2 104 105-211 13-116 (170)
399 2r9u_A Variable lymphocyte rec 99.4 2.2E-13 7.5E-18 136.1 9.0 106 536-644 15-120 (174)
400 4gt6_A Cell surface protein; l 99.3 1.1E-11 3.7E-16 141.7 17.4 319 259-615 53-388 (394)
401 4gt6_A Cell surface protein; l 99.3 1.4E-11 4.9E-16 140.6 16.2 288 343-641 66-369 (394)
402 3un9_A NLR family member X1; l 99.3 6.2E-14 2.1E-18 158.0 -7.2 93 197-289 155-259 (372)
403 3un9_A NLR family member X1; l 99.3 1.7E-13 5.8E-18 154.4 -3.8 159 485-643 72-253 (372)
404 2ifg_A High affinity nerve gro 99.2 1.3E-11 4.4E-16 138.5 9.7 92 117-210 24-116 (347)
405 2ifg_A High affinity nerve gro 99.2 1.5E-11 5E-16 138.1 8.3 101 178-281 13-115 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 9.8E-11 3.3E-15 125.6 11.8 148 754-914 9-213 (263)
407 3rw6_A Nuclear RNA export fact 99.0 1.8E-12 6.1E-17 136.9 -8.0 144 63-211 76-234 (267)
408 4h09_A Hypothetical leucine ri 99.0 3E-09 1E-13 120.7 17.3 145 479-628 211-355 (379)
409 4h09_A Hypothetical leucine ri 99.0 5.4E-09 1.8E-13 118.6 18.1 147 407-558 211-357 (379)
410 1nd4_A Aminoglycoside 3'-phosp 99.0 5.3E-10 1.8E-14 119.7 8.0 137 760-914 21-214 (264)
411 2ra8_A Uncharacterized protein 99.0 1E-10 3.5E-15 130.5 1.1 83 220-304 251-341 (362)
412 2ra8_A Uncharacterized protein 98.9 1.6E-10 5.3E-15 128.9 0.7 64 243-306 250-320 (362)
413 3dxp_A Putative acyl-COA dehyd 98.9 4.2E-09 1.4E-13 118.4 12.4 143 763-914 42-248 (359)
414 3sg8_A APH(2'')-ID; antibiotic 98.7 3.8E-09 1.3E-13 115.8 4.5 184 764-964 25-286 (304)
415 3r70_A Aminoglycoside phosphot 98.6 1.3E-07 4.3E-12 104.3 11.2 138 760-916 38-239 (320)
416 3rw6_A Nuclear RNA export fact 98.5 1.8E-08 6E-13 106.4 -0.2 112 90-203 130-257 (267)
417 1io0_A Tropomodulin; LRR prote 98.4 3E-08 1E-12 99.6 -0.9 119 504-642 31-164 (185)
418 1io0_A Tropomodulin; LRR prote 98.3 6.2E-08 2.1E-12 97.3 -0.0 114 481-594 32-164 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 3.6E-06 1.2E-10 90.2 11.9 136 765-914 30-223 (272)
420 3tdw_A Gentamicin resistance p 98.2 7.1E-06 2.4E-10 89.5 12.3 137 764-915 24-225 (306)
421 3d1u_A Putative fructosamine-3 98.1 7.3E-06 2.5E-10 88.3 10.4 77 762-846 18-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.2E-05 4.1E-10 89.8 12.3 146 761-916 43-245 (362)
423 3ats_A Putative uncharacterize 97.8 9.5E-05 3.3E-09 82.5 12.5 84 764-848 25-122 (357)
424 2q83_A YTAA protein; 2635576, 97.7 0.00014 4.9E-09 80.5 11.3 141 765-914 38-252 (346)
425 2olc_A MTR kinase, methylthior 97.7 7.4E-05 2.5E-09 84.8 9.1 79 764-844 35-120 (397)
426 3e4g_A ATP synthase subunit S, 97.6 1.4E-05 4.9E-10 77.9 2.0 83 485-567 61-149 (176)
427 3jr1_A Putative fructosamine-3 97.6 0.00037 1.3E-08 75.6 12.8 76 763-846 40-118 (312)
428 3e4g_A ATP synthase subunit S, 97.6 3E-05 1E-09 75.7 3.3 83 366-448 62-150 (176)
429 2pyw_A Uncharacterized protein 97.3 0.00062 2.1E-08 77.7 11.0 76 884-961 232-312 (420)
430 1pgv_A TMD-1, tropomodulin TMD 97.2 9.2E-05 3.1E-09 73.6 1.8 110 484-593 40-169 (197)
431 1pgv_A TMD-1, tropomodulin TMD 97.2 4.1E-05 1.4E-09 76.2 -0.8 89 552-640 65-168 (197)
432 3f7w_A Putative fructosamine-3 97.2 0.00075 2.6E-08 72.6 8.7 79 760-846 16-97 (288)
433 1zyl_A Hypothetical protein YI 97.2 0.0039 1.3E-07 68.3 14.7 158 749-914 11-223 (328)
434 2ppq_A HSK, HK, homoserine kin 97.1 0.0025 8.7E-08 69.6 12.8 159 749-914 7-217 (322)
435 3rfe_A Platelet glycoprotein I 97.0 0.00047 1.6E-08 64.1 4.7 57 585-643 12-69 (130)
436 3feg_A Choline/ethanolamine ki 97.0 0.0018 6E-08 72.2 9.7 142 764-914 55-254 (379)
437 3csv_A Aminoglycoside phosphot 96.9 0.0018 6.1E-08 71.3 9.0 32 884-915 183-218 (333)
438 1nw1_A Choline kinase (49.2 KD 96.8 0.0023 7.9E-08 72.9 8.9 73 764-846 78-159 (429)
439 3dxq_A Choline/ethanolamine ki 96.8 0.0025 8.4E-08 69.0 8.6 71 764-846 23-95 (301)
440 3rfe_A Platelet glycoprotein I 96.5 0.0027 9.1E-08 58.9 5.7 56 537-594 12-68 (130)
441 3c5i_A Choline kinase; choline 96.2 0.006 2.1E-07 68.1 7.5 74 764-846 38-121 (369)
442 2qg7_A Ethanolamine kinase PV0 96.2 0.012 4E-07 67.4 9.5 74 764-846 113-188 (458)
443 3i1a_A Spectinomycin phosphotr 96.2 0.018 6.2E-07 63.2 10.8 32 884-915 206-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.5 0.027 9.3E-07 62.8 8.7 146 765-914 58-280 (401)
445 2yle_A Protein spire homolog 1 95.4 0.063 2.2E-06 53.5 9.9 100 844-961 33-132 (229)
446 3mes_A Choline kinase; malaria 94.8 0.041 1.4E-06 62.0 7.7 74 764-846 75-157 (424)
447 2ks1_B Epidermal growth factor 93.0 0.05 1.7E-06 38.7 2.2 29 687-715 12-40 (44)
448 2l2t_A Receptor tyrosine-prote 92.3 0.046 1.6E-06 38.7 1.3 29 688-716 12-40 (44)
449 3g15_A CK, chetk-alpha, cholin 88.6 0.14 4.9E-06 57.5 1.9 29 886-914 246-280 (401)
450 2jwa_A Receptor tyrosine-prote 87.7 0.24 8.1E-06 35.1 1.8 27 689-715 14-40 (44)
451 4ann_A ESSB; membrane protein, 84.4 2.3 7.9E-05 42.3 7.8 115 817-966 43-158 (215)
452 4ano_A ESSB; membrane protein, 82.4 3.7 0.00013 40.9 8.4 114 817-966 48-163 (219)
453 2k1k_A Ephrin type-A receptor 70.8 2.1 7.2E-05 29.4 1.9 23 689-711 13-35 (38)
454 3cxl_A N-chimerin; SH2, RHO-GA 68.1 0.69 2.3E-05 52.8 -1.6 61 764-829 147-214 (463)
455 2k9y_A Ephrin type-A receptor 64.7 2.8 9.4E-05 29.4 1.6 11 688-698 15-25 (41)
456 1iij_A ERBB-2 receptor protein 51.2 2.9 0.0001 27.9 -0.2 25 689-713 10-34 (35)
457 2knc_A Integrin alpha-IIB; tra 49.5 8.9 0.00031 28.5 2.1 17 686-702 13-29 (54)
458 2l9u_A Receptor tyrosine-prote 47.6 5.5 0.00019 26.0 0.7 24 690-713 10-33 (40)
459 2lz0_A Uncharacterized protein 47.4 24 0.00081 30.3 5.0 45 401-446 8-52 (100)
460 2lz0_A Uncharacterized protein 46.9 30 0.001 29.6 5.6 47 376-423 7-53 (100)
461 1zza_A Stannin, AG8_1; helix, 46.1 17 0.00059 28.1 3.3 10 704-713 32-41 (90)
462 3eps_A Isocitrate dehydrogenas 45.1 3.8E+02 0.013 30.2 16.1 155 751-916 298-483 (578)
463 2l8s_A Integrin alpha-1; trans 44.5 8.6 0.00029 28.5 1.4 17 686-702 10-26 (54)
464 2k1a_A Integrin alpha-IIB; sin 38.5 14 0.00048 25.9 1.6 16 686-701 11-26 (42)
465 2ks1_B Epidermal growth factor 33.1 23 0.00078 25.2 2.0 20 700-719 22-41 (44)
466 2l2t_A Receptor tyrosine-prote 32.8 30 0.001 24.6 2.6 22 700-721 21-42 (44)
467 3ls8_A Phosphatidylinositol 3- 32.7 2.9E+02 0.0099 32.0 12.4 26 889-914 477-502 (614)
468 1cja_A Protein (actin-fragmin 26.6 3.5E+02 0.012 28.6 10.7 138 763-914 73-237 (342)
469 2jwa_A Receptor tyrosine-prote 21.6 58 0.002 23.1 2.4 26 694-719 16-41 (44)
470 3hhm_A Phosphatidylinositol-4, 21.5 3E+02 0.01 34.2 10.3 26 889-914 937-962 (1091)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1e-89 Score=859.24 Aligned_cols=637 Identities=31% Similarity=0.475 Sum_probs=559.8
Q ss_pred cccCCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEecCCccccc---cCC--
Q 043316 20 NVSSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGT---FQD-- 94 (1031)
Q Consensus 20 ~~~~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~---~~~-- 94 (1031)
+++.+.++|++|||+||+++. ||. .++||+ .++|||+|+||+|+ .|||++|+|++.++.|. +++
T Consensus 5 ~~~~~~~~~~~all~~k~~~~--~~~--~l~~W~------~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l 73 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP--DKN--LLPDWS------SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSL 73 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS--CTT--SSTTCC------TTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHHhhCC--Ccc--cccCCC------CCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhH
Confidence 344557889999999999998 663 799997 57899999999998 69999999999999997 553
Q ss_pred --------------------ccccCCCcccEEecCCCcCcCCCcc--ccccCCcCcEeeCCCCcccCCCCccc-cccccc
Q 043316 95 --------------------FSFSSFPHLMYLNLSCNVLYGNIPP--QISNLSKLRALDLGNNQLSGVIPQEI-GHLTCL 151 (1031)
Q Consensus 95 --------------------~~~~~l~~l~~L~l~~n~~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L 151 (1031)
..|+++++|++|||++|.++|.+|. .++++++|++|||++|.+++.+|..+ +++++|
T Consensus 74 ~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L 153 (768)
T 3rgz_A 74 LSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSL 153 (768)
T ss_dssp TTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTC
T ss_pred hccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCC
Confidence 3578888888888888888888888 88888888888888888888888776 788888
Q ss_pred eEEEeeccccCCCCCcc---ccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccc
Q 043316 152 RMLYFDVNHLHGSIPLE---IGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDL 228 (1031)
Q Consensus 152 ~~L~l~~n~l~~~~p~~---~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 228 (1031)
++|+|++|++++..|.. ++++++|++|+|++|.+++.+|. +++++|++|++++|++++.+|. ++++++|++|+|
T Consensus 154 ~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 154 EVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp SEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred CEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 88888888888777776 78888888888888888876664 7788888888888888877777 888888999999
Q ss_pred cccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccC-CCCCeeeeccCccCC
Q 043316 229 SQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNL-SSLTLMSLFNNSLSG 307 (1031)
Q Consensus 229 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~ 307 (1031)
++|++++.+|..++++++|++|+|++|.+++.+|.. .+++|++|+|++|++++.+|..+... ++|++|+|++|++++
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~ 308 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEE
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCC
Confidence 988888888888888888899998888888877765 78888888888888888888887765 889999999999888
Q ss_pred CCCCCCCChhhhhhhhccccccCCCCccc-ccccccCceEEcccCCCcCccCCccCccc-ccceEEccccccCCCccccc
Q 043316 308 SIPPTQGNLEALSELGLYINQLDGVIPPS-IGNLSSLRTLYLYDNGFYGLVPNEIGYLK-SLSKLELCRNHLSGVIPHSI 385 (1031)
Q Consensus 308 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~ 385 (1031)
.+|..++++++|++|++++|.+.|.+|.. ++.+++|++|++++|++++.+|..+..++ +|+.|++++|++++.+|..+
T Consensus 309 ~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~ 388 (768)
T 3rgz_A 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTT
T ss_pred ccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhh
Confidence 88888888899999999999888888866 88888999999999988888888888887 88999999998888888877
Q ss_pred cC--CCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCcc
Q 043316 386 GN--LTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKL 463 (1031)
Q Consensus 386 ~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L 463 (1031)
.. +++|++|++++|++++..|..|.++++|++|++++|++.+..+..|..+++|+.|++++|++++..+..+..+++|
T Consensus 389 ~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 468 (768)
T 3rgz_A 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 468 (768)
T ss_dssp TCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred hhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCc
Confidence 76 7889999999999998889999999999999999999988888899999999999999999998888888899999
Q ss_pred ccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcC
Q 043316 464 GTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSAN 543 (1031)
Q Consensus 464 ~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 543 (1031)
++|++++|.+.+.+|..+..+++|++|+|++|++++.+|.+|+.+++|+.|+|++|++++.+|..+..+++|++|++++|
T Consensus 469 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 548 (768)
T 3rgz_A 469 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSS
T ss_pred eEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCC
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccc----------------------------------------------------------------------
Q 043316 544 KLSSSIPKSM---------------------------------------------------------------------- 553 (1031)
Q Consensus 544 ~l~~~~p~~~---------------------------------------------------------------------- 553 (1031)
++++.+|..+
T Consensus 549 ~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~ 628 (768)
T 3rgz_A 549 LFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628 (768)
T ss_dssp EEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSC
T ss_pred ccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhh
Confidence 8887766543
Q ss_pred cCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceE
Q 043316 554 GNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSR 633 (1031)
Q Consensus 554 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 633 (1031)
..+++|++|+|++|++++.+|..|+.+++|+.|+|++|+++|.+|..|+++++|+.|+|++|++++.+|..+..+++|++
T Consensus 629 ~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 708 (768)
T 3rgz_A 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 708 (768)
T ss_dssp SSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSE
T ss_pred hccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccccCCCCCCCCc---ccccccCCCCccCCCCCCCCCCc
Q 043316 634 IDIAYNELQGPIPNSTAF---KDGLMEGNKGLCGNFKALPSCDA 674 (1031)
Q Consensus 634 L~l~~N~l~~~~p~~~~~---~~~~~~~n~~~c~~~~~~~~c~~ 674 (1031)
||+++|+++|.||...+| ....|.||+++||.+ .++|..
T Consensus 709 L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~--l~~C~~ 750 (768)
T 3rgz_A 709 IDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP--LPRCDP 750 (768)
T ss_dssp EECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT--SCCCCS
T ss_pred EECcCCcccccCCCchhhccCCHHHhcCCchhcCCC--CcCCCC
Confidence 999999999999988764 557899999999975 347864
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.2e-72 Score=697.45 Aligned_cols=562 Identities=33% Similarity=0.447 Sum_probs=512.2
Q ss_pred CCEEEEEecCCccccccCCc-cccCCCcccEEecCCCcCcCCCcccc-ccCCcCcEeeCCCCcccCCCCcc---cccccc
Q 043316 76 GRVISISLSSLGLNGTFQDF-SFSSFPHLMYLNLSCNVLYGNIPPQI-SNLSKLRALDLGNNQLSGVIPQE---IGHLTC 150 (1031)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~-~~~~l~~l~~L~l~~n~~~~~~p~~~-~~l~~L~~L~l~~n~l~~~~p~~---~~~l~~ 150 (1031)
.+.+.|+|+++.+.|.+|.. .++++++|++|+|++|.+++.+|..+ +++++|++|||++|++++..|.. ++++++
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 46788999999999998872 49999999999999999999999877 89999999999999999888877 889999
Q ss_pred ceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccc
Q 043316 151 LRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQ 230 (1031)
Q Consensus 151 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 230 (1031)
|++|++++|.+++.+|. +.+++|++|+|++|.+++.+|. ++++++|++|++++|++++.+|..++++++|++|+|++
T Consensus 180 L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~ 256 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256 (768)
T ss_dssp CCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCS
T ss_pred CCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCC
Confidence 99999999999987765 8899999999999999988887 99999999999999999999999999999999999999
Q ss_pred cccccccCccccccCcccEEEeecCcCCCCCCcccccc-ccccccccccccccccCCcccccCCCCCeeeeccCccCCCC
Q 043316 231 NQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNL-KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSI 309 (1031)
Q Consensus 231 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 309 (1031)
|++++.+|.. .+++|++|+|++|++++.+|..+..+ ++|++|+|++|++++.+|..|+++++|++|++++|+++|.+
T Consensus 257 n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~i 334 (768)
T 3rgz_A 257 NQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334 (768)
T ss_dssp SCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred CcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcC
Confidence 9999888875 88999999999999998889888775 99999999999999999999999999999999999999888
Q ss_pred CCC-CCChhhhhhhhccccccCCCCcccccccc-cCceEEcccCCCcCccCCccCc--ccccceEEccccccCCCccccc
Q 043316 310 PPT-QGNLEALSELGLYINQLDGVIPPSIGNLS-SLRTLYLYDNGFYGLVPNEIGY--LKSLSKLELCRNHLSGVIPHSI 385 (1031)
Q Consensus 310 p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~p~~~ 385 (1031)
|.. ++++++|++|++++|++++.+|..+.+++ +|++|++++|++++.+|..+.. +++|++|++++|++++.+|..+
T Consensus 335 p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l 414 (768)
T 3rgz_A 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414 (768)
T ss_dssp CHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGG
T ss_pred CHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHH
Confidence 876 88999999999999999999999999887 8999999999999888888877 8889999999999998999999
Q ss_pred cCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCcccc
Q 043316 386 GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGT 465 (1031)
Q Consensus 386 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 465 (1031)
+++++|++|++++|++++..|..|..+++|++|++++|.+.+..+..+..+++|+.|++++|++++..+..+.++++|++
T Consensus 415 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 494 (768)
T 3rgz_A 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494 (768)
T ss_dssp GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred hcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCE
Confidence 99999999999999999999999999999999999999999888999999999999999999999888888999999999
Q ss_pred ccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCccc-----------------
Q 043316 466 FNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLE----------------- 528 (1031)
Q Consensus 466 L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~----------------- 528 (1031)
|++++|++.+.+|..++.+++|++|+|++|++++.+|..+..+++|+.|++++|++++.+|..
T Consensus 495 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 574 (768)
T 3rgz_A 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCE
T ss_pred EEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999988777754
Q ss_pred -----------------------------------------------------ccccCccceeecCcCcCCCCCcccccC
Q 043316 529 -----------------------------------------------------FGSLTELQYLDLSANKLSSSIPKSMGN 555 (1031)
Q Consensus 529 -----------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 555 (1031)
+..+++|++|||++|+++|.+|..+++
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~ 654 (768)
T 3rgz_A 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654 (768)
T ss_dssp EEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc
Confidence 334578999999999999999999999
Q ss_pred CCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEe
Q 043316 556 LSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRID 635 (1031)
Q Consensus 556 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 635 (1031)
+++|++|+|++|++++.+|..|+.+++|+.||||+|+++|.+|..+..+++|++|+|++|+++|.+|.. ..+.++....
T Consensus 655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~ 733 (768)
T 3rgz_A 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAK 733 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGG
T ss_pred cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998864 2344455556
Q ss_pred cccccccC
Q 043316 636 IAYNELQG 643 (1031)
Q Consensus 636 l~~N~l~~ 643 (1031)
+.+|+--|
T Consensus 734 ~~gN~~Lc 741 (768)
T 3rgz_A 734 FLNNPGLC 741 (768)
T ss_dssp GCSCTEEE
T ss_pred hcCCchhc
Confidence 78887444
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.3e-64 Score=624.71 Aligned_cols=569 Identities=24% Similarity=0.265 Sum_probs=356.6
Q ss_pred CEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEe
Q 043316 77 RVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYF 156 (1031)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 156 (1031)
+++.|+|+++++.+ +++..|+++++|++|+|++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|++
T Consensus 26 ~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 26 NITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 45556666665554 23333556666666666666666555555666666666666666665333334666666666666
Q ss_pred eccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccc--cccccccccccccccc
Q 043316 157 DVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMG--NLNSLSILDLSQNQLR 234 (1031)
Q Consensus 157 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~ 234 (1031)
++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+++..|..++ .+++|++|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 66666544445566666666666666666655555566666666666666666554444433 3355666666666666
Q ss_pred cccCccccccCcccEEEeecCcCCCCCCcccc---ccccccccccccccccccCCcccccCCC--CCeeeeccCccCCCC
Q 043316 235 GSIPFSLANLSNLGILYLYKNSLFGFIPSVIG---NLKSLFELDLSENQLFGSIPLSFSNLSS--LTLMSLFNNSLSGSI 309 (1031)
Q Consensus 235 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~ 309 (1031)
+..|..+..+++|+.|++++|.+.+.....+. ..++|+.|++++|++++..|..|.+++. |+.|++++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 55555566666666666665554422111111 1256666777777776666666666644 777777777776666
Q ss_pred CCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcC-----ccCC----ccCcccccceEEccccccCCC
Q 043316 310 PPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYG-----LVPN----EIGYLKSLSKLELCRNHLSGV 380 (1031)
Q Consensus 310 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p~----~~~~l~~L~~L~L~~N~l~~~ 380 (1031)
|..++++++|++|++++|++.+..|..|+.+++|++|++++|...+ .+|. .|..+++|++|++++|++++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 6667777777777777777776666667777777777776654432 1222 456667777777777777766
Q ss_pred ccccccCCCCCceEeccCcccC--CcCchhccCC--ccccceeccccccccccccccCCCCCCCeeccccccccC-cccc
Q 043316 381 IPHSIGNLTKLVLVNMCENHLF--GLIPKSFRNL--TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG-EISF 455 (1031)
Q Consensus 381 ~p~~~~~l~~L~~L~l~~N~l~--~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~ 455 (1031)
.+..|.++++|++|++++|.+. .+....|..+ ++|+.|++++|++.++.+.+|..+++|+.|+|++|.+++ +...
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 6666777777777777776532 2333334433 367777777777777766677777777777777777664 3335
Q ss_pred cccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCccc--CCChhhhhccccCceeecccccccCCCcccccccC
Q 043316 456 NWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIV--GKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLT 533 (1031)
Q Consensus 456 ~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 533 (1031)
.|.+++.|++|++++|.+.+..+..|..+++|+.|++++|.+. +..|..|..+++|+.|++++|++++..+..|.+++
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 504 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccc
Confidence 6666777777777777776666666777777777777777665 45566677777777777777777766666677777
Q ss_pred ccceeecCcCcCCCCCc--------ccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcc
Q 043316 534 ELQYLDLSANKLSSSIP--------KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNME 605 (1031)
Q Consensus 534 ~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 605 (1031)
+|++|+|++|++++..+ ..|.++++|++|+|++|+|+.+.+..|.++++|+.|||++|+|++..+..|..++
T Consensus 505 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~ 584 (680)
T 1ziw_A 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQV 584 (680)
T ss_dssp TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCC
Confidence 77777777777664311 2256667777777777777655555677777777777777777755555566677
Q ss_pred cchhhhcCCCccCCCCccccc-cCCcceEEecccccccCCCC
Q 043316 606 SLEELNLSHNNLFDLIPGCFE-EMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 606 ~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~p 646 (1031)
+|+.|+|++|+|++..+..|. .+++|+.+++++|+|.|..+
T Consensus 585 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 585 SLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 777777777777776666665 56677777777777766543
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.6e-63 Score=617.23 Aligned_cols=579 Identities=25% Similarity=0.238 Sum_probs=510.8
Q ss_pred EecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeecccc
Q 043316 82 SLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161 (1031)
Q Consensus 82 ~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l 161 (1031)
|.++.+++ .+|.. +. +++++|+|++|.+++..|..++++++|++|+|++|.+++..|..++++++|++|+|++|++
T Consensus 10 ~cs~~~L~-~ip~~-~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 85 (680)
T 1ziw_A 10 DCSHLKLT-QVPDD-LP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85 (680)
T ss_dssp ECCSSCCS-SCCSC-SC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCC
T ss_pred ECCCCCcc-ccccc-cC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCcc
Confidence 34444443 34543 32 7899999999999987777899999999999999999999999999999999999999999
Q ss_pred CCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccc
Q 043316 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSL 241 (1031)
Q Consensus 162 ~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 241 (1031)
++..+..|+++++|++|+|++|++++..|..|+++++|++|++++|.+++..|..++++++|++|+|++|++++..|..+
T Consensus 86 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 165 (680)
T 1ziw_A 86 SQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEEL 165 (680)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHH
T ss_pred CccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHh
Confidence 94434479999999999999999997777899999999999999999999889999999999999999999997777665
Q ss_pred c--ccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccc---cCCCCCeeeeccCccCCCCCCCCCCh
Q 043316 242 A--NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFS---NLSSLTLMSLFNNSLSGSIPPTQGNL 316 (1031)
Q Consensus 242 ~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~~~l 316 (1031)
. .+++|+.|++++|.+++..|..+..+++|+.|++++|++.+.....+. ..++|+.|++++|.+++..|..+.++
T Consensus 166 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l 245 (680)
T 1ziw_A 166 DIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL 245 (680)
T ss_dssp GGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGG
T ss_pred hccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhcc
Confidence 4 568999999999999999999999999999999999988743332221 35899999999999999999999998
Q ss_pred hh--hhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCC-----Cccc----cc
Q 043316 317 EA--LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSG-----VIPH----SI 385 (1031)
Q Consensus 317 ~~--L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p~----~~ 385 (1031)
+. |++|++++|++++..|..|+.+++|++|++++|.+++..|..+..+++|+.|++++|...+ .+|. .|
T Consensus 246 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~ 325 (680)
T 1ziw_A 246 KWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 325 (680)
T ss_dssp GGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTT
T ss_pred CcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhc
Confidence 76 9999999999999989999999999999999999999999999999999999999886653 2333 78
Q ss_pred cCCCCCceEeccCcccCCcCchhccCCccccceecccccc--ccccccccCCC--CCCCeeccccccccCcccccccCCC
Q 043316 386 GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL--FGKVYEAFGDH--PNLTFLDLSQNNLYGEISFNWRNFP 461 (1031)
Q Consensus 386 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l--~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~ 461 (1031)
..+++|++|++++|++.+..+..|.++++|++|++++|.+ ..+....|..+ ++|+.|++++|+++++.+..|..++
T Consensus 326 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~ 405 (680)
T 1ziw_A 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLG 405 (680)
T ss_dssp TTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred ccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCC
Confidence 8999999999999999999999999999999999999974 34444455443 6899999999999999999999999
Q ss_pred ccccccCcccccCCCCC-CCccCCCCCcEEEeeCCcccCCChhhhhccccCceeeccccccc--CCCcccccccCcccee
Q 043316 462 KLGTFNASMNNIYGSIP-PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS--GGVPLEFGSLTELQYL 538 (1031)
Q Consensus 462 ~L~~L~l~~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L 538 (1031)
+|+.|++++|.+.+.+| ..+..+++|++|++++|++.+..+..|..+++|+.|++++|+++ +..|..|..+++|++|
T Consensus 406 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L 485 (680)
T 1ziw_A 406 HLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTIL 485 (680)
T ss_dssp TCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEE
T ss_pred CCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEE
Confidence 99999999999987666 67899999999999999999999999999999999999999987 5788999999999999
Q ss_pred ecCcCcCCCCCcccccCCCccceecccCcccCCCCc--------hhhccccccCceeccCcccCCcCCccccCcccchhh
Q 043316 539 DLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP--------TEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEEL 610 (1031)
Q Consensus 539 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 610 (1031)
+|++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..|..+++|+.|
T Consensus 486 ~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 565 (680)
T 1ziw_A 486 DLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKII 565 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCccee
Confidence 999999998888889999999999999999986522 348899999999999999995555679999999999
Q ss_pred hcCCCccCCCCccccccCCcceEEecccccccCCCCCCC-----CcccccccCCCCccC
Q 043316 611 NLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNST-----AFKDGLMEGNKGLCG 664 (1031)
Q Consensus 611 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~-----~~~~~~~~~n~~~c~ 664 (1031)
+|++|+|+++.+..|..+++|++|++++|++++..|... ........+|++.|.
T Consensus 566 ~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 566 DLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred ECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 999999999988999999999999999999998776422 233445779999886
No 5
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.5e-62 Score=595.41 Aligned_cols=495 Identities=19% Similarity=0.245 Sum_probs=306.9
Q ss_pred CChHhHHHHHHHHHhCcCCCCCCC-------ccCCCCCCCCCCCCCCCCcc---ceeEeCCCCCEEEEEecCCccccccC
Q 043316 24 DSTKESYALLNWKTSLQNQNPNSS-------LLSSWTLYPANATKISPCTW---FGIFCNLVGRVISISLSSLGLNGTFQ 93 (1031)
Q Consensus 24 ~~~~~~~all~~k~~~~~~~~~~~-------~~~sw~~~~~~~~~~~~C~w---~gv~c~~~~~v~~l~l~~~~l~g~~~ 93 (1031)
....|+.||.+||+++. ++.+. ...+|+ .++|||.| +||+|+..|||++|+|+++++.|++|
T Consensus 27 ~~~~d~~aL~~~~~~~~--~~~w~~~~~~~~~~~~W~------~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp 98 (636)
T 4eco_A 27 EYIKDYLALKEIWDALN--GKNWSQQGFGTQPGANWN------FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVP 98 (636)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGCCCCC------CCCC------CSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEEC
T ss_pred hHHHHHHHHHHHHHHcC--CCCcccCCcCCccCCCCC------CCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCC
Confidence 34579999999999986 33333 234787 57899999 99999888999999999999999999
Q ss_pred CccccCCCcccEEecCCCcC------cC------CCccccccCCcCcEeeCCCCcccCCCCcccccc-ccceEEEeeccc
Q 043316 94 DFSFSSFPHLMYLNLSCNVL------YG------NIPPQISNLSKLRALDLGNNQLSGVIPQEIGHL-TCLRMLYFDVNH 160 (1031)
Q Consensus 94 ~~~~~~l~~l~~L~l~~n~~------~~------~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l-~~L~~L~l~~n~ 160 (1031)
+. ++++++|++|+|++|.+ .| .+|+.. +..|+ +++++|.+.+.+|..++.+ ..+..+++....
T Consensus 99 ~~-l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~ 174 (636)
T 4eco_A 99 DA-IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKS 174 (636)
T ss_dssp GG-GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCC
T ss_pred hH-HhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccc
Confidence 75 99999999999999987 44 566655 66777 8888888888888777632 334444433221
Q ss_pred cCCCCCccccCcccCceeec--cCcccCCCCCCcccccccccEEEecccccccc-----------------cCcccc--c
Q 043316 161 LHGSIPLEIGKLSLINVLTL--CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGS-----------------IPNVMG--N 219 (1031)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L--~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~-----------------~p~~~~--~ 219 (1031)
+. ......++.+.+ .+|+++| ||+.++++++|++|+|++|+++|. +|..++ +
T Consensus 175 ~~------~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~ 247 (636)
T 4eco_A 175 IK------KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDN 247 (636)
T ss_dssp CC------CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG
T ss_pred cc------cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcc
Confidence 11 011111222222 2345554 555555555555555555555543 555555 5
Q ss_pred ccccccccccccccccccCccccccCcccEEEeecCc-CCC-CCCcccccc------ccccccccccccccccCCc--cc
Q 043316 220 LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS-LFG-FIPSVIGNL------KSLFELDLSENQLFGSIPL--SF 289 (1031)
Q Consensus 220 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~ 289 (1031)
+++|++|+|++|++.+.+|..++++++|++|+|++|+ +++ .+|..++++ ++|++|+|++|+++ .+|. .|
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l 326 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL 326 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh
Confidence 5555555555555555555555555555555555555 555 455555544 55566666666555 5555 55
Q ss_pred ccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc-CceEEcccCCCcCccCCccCccc--c
Q 043316 290 SNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS-LRTLYLYDNGFYGLVPNEIGYLK--S 366 (1031)
Q Consensus 290 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~ 366 (1031)
+++++|++|++++|+++|.+| .++++++|++|++++|+++ .+|..++.+++ |++|++++|.++ .+|..+..+. +
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~ 403 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSV 403 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSC
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCc
Confidence 556666666666666655555 5555666666666666665 55556666666 666666666665 4455555443 6
Q ss_pred cceEEccccccCCCcccccc-------CCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCC--
Q 043316 367 LSKLELCRNHLSGVIPHSIG-------NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHP-- 437 (1031)
Q Consensus 367 L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-- 437 (1031)
|++|++++|++++.+|..+. .+++|++|++++|+++.+.+..|..+++|++|+|++|++..++...+....
T Consensus 404 L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~ 483 (636)
T 4eco_A 404 MSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENEN 483 (636)
T ss_dssp EEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEE
T ss_pred cCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccccc
Confidence 66666666666666666666 566666666666666655555566667777777777777655555554433
Q ss_pred -----CCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCcc--CCCCCcEEEeeCCcccCCChhhhhcccc
Q 043316 438 -----NLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG--DSSKLQVLDLSSNHIVGKIPVQFEKLFS 510 (1031)
Q Consensus 438 -----~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 510 (1031)
+|+.|+|++|+++.+ |..+. .+++|++|+|++|+|++ +|..+..+++
T Consensus 484 ~~~l~~L~~L~Ls~N~l~~l-------------------------p~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~ 537 (636)
T 4eco_A 484 FKNTYLLTSIDLRFNKLTKL-------------------------SDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSST 537 (636)
T ss_dssp CTTGGGCCEEECCSSCCCBC-------------------------CGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSS
T ss_pred ccccCCccEEECcCCcCCcc-------------------------ChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCC
Confidence 788888888777633 33333 45555555555555554 4555555555
Q ss_pred Cceeec------ccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccC
Q 043316 511 LNKLIL------NLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFN 570 (1031)
Q Consensus 511 L~~L~L------~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 570 (1031)
|+.|+| ++|++.+.+|..+..+++|++|+|++|+++ .+|..+. ++|++|+|++|++.
T Consensus 538 L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 538 LKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp CCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTC
T ss_pred CCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCc
Confidence 555555 445555566666666666666666666663 4555444 45666666666554
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-59 Score=592.37 Aligned_cols=532 Identities=25% Similarity=0.234 Sum_probs=428.3
Q ss_pred EecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCC-CccccccccceEEEeeccc
Q 043316 82 SLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVI-PQEIGHLTCLRMLYFDVNH 160 (1031)
Q Consensus 82 ~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~n~ 160 (1031)
+.++.+++. +|. ..+++++|||++|.+++..|..++++++|++|||++|.+.+.+ |..|+++++|++|+|++|.
T Consensus 10 dcs~~~L~~-vP~----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 10 FYRFCNLTQ-VPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EESCCCSSC-CCS----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EccCCCCCC-CCC----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 445555553 333 3478899999999998888888999999999999998776666 6778999999999999999
Q ss_pred cCCCCCccccCcccCceeeccCcccCCCCCCc--ccccccccEEEecccccccccC-ccccccccccccccccccccccc
Q 043316 161 LHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS--LGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSI 237 (1031)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~--~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 237 (1031)
+++..|..|+++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..| ..|+++++|++|+|++|++++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 98778888999999999999999998877765 8889999999999998887654 57888899999999999888888
Q ss_pred Ccccccc--CcccEEEeecCcCCCCCCcccccccc------ccccccccccccccCCcccccC---CCCCeeeeccCccC
Q 043316 238 PFSLANL--SNLGILYLYKNSLFGFIPSVIGNLKS------LFELDLSENQLFGSIPLSFSNL---SSLTLMSLFNNSLS 306 (1031)
Q Consensus 238 p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~ 306 (1031)
|..+..+ ++|+.|+|+.|.+++..|..++.+.+ |++|++++|++++.+|..+... ++++.|.++++.+.
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~ 244 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMG 244 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCB
T ss_pred HHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccc
Confidence 8888877 78888999988888888777776665 8888888888887777766543 56777777654432
Q ss_pred CCCCCCCCChhhhhhhhccccccCCCCccccccc--ccCceEEcccCCCcCccCCccCcccccceEEccccccCCCcccc
Q 043316 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL--SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS 384 (1031)
Q Consensus 307 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 384 (1031)
.. ...+.+.+..+..|..+ ++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..
T Consensus 245 ~~---------------~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 309 (844)
T 3j0a_A 245 AG---------------FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEA 309 (844)
T ss_dssp CS---------------SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTT
T ss_pred cc---------------ccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHH
Confidence 11 12233333333444443 67888888888888777777888888888888888888777778
Q ss_pred ccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccc
Q 043316 385 IGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLG 464 (1031)
Q Consensus 385 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 464 (1031)
|.++++|++|++++|++.+..+..|.++++|++|++++|++..+.+..|..+++|+.|+|++|.++++.. ++.|+
T Consensus 310 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~-----~~~L~ 384 (844)
T 3j0a_A 310 FYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF-----IPSIP 384 (844)
T ss_dssp TTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS-----CCSCS
T ss_pred hcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC-----CCCcc
Confidence 8888888888888888888878888888888888888888888888888888888888888888875433 67788
Q ss_pred cccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCC-hhhhhccccCceeecccccccCCCcc-cccccCccceeecCc
Q 043316 465 TFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI-PVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSA 542 (1031)
Q Consensus 465 ~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~ 542 (1031)
.+++++|++. .+|.. ..+++.|++++|++++.. +..+..+++|+.|+|++|++++..+. .+..+++|++|+|++
T Consensus 385 ~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~ 460 (844)
T 3j0a_A 385 DIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGE 460 (844)
T ss_dssp EEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEES
T ss_pred hhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCC
Confidence 8888888887 34443 467899999999998653 33456899999999999999965543 466789999999999
Q ss_pred CcCC-----CCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCcc
Q 043316 543 NKLS-----SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNL 617 (1031)
Q Consensus 543 N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 617 (1031)
|.++ +..+..|.++++|++|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|+|++|+|
T Consensus 461 N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l 538 (844)
T 3j0a_A 461 NMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQL 538 (844)
T ss_dssp CCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECC
T ss_pred CccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcC
Confidence 9997 44556789999999999999999999999999999999999999999977776666 8999999999999
Q ss_pred CCCCccccccCCcceEEecccccccCCCCC
Q 043316 618 FDLIPGCFEEMRSLSRIDIAYNELQGPIPN 647 (1031)
Q Consensus 618 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 647 (1031)
++..|..| .+|+.+++++|++.|..+.
T Consensus 539 ~~~~~~~~---~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 539 LAPNPDVF---VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCCCSCCC---SSCCEEEEEEECCCCSSSC
T ss_pred CCCChhHh---CCcCEEEecCCCccccccc
Confidence 99999776 4789999999999997663
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7e-60 Score=576.60 Aligned_cols=521 Identities=22% Similarity=0.263 Sum_probs=426.7
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 36899999999999888889999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCccc--EEEeecCcCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG--ILYLYKNSLF 258 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~--~L~L~~N~l~ 258 (1031)
++|.+++..|..++++++|++|++++|++++..++.+..+++|++|+|++|++++..|..++.+++|+ .|++++|.++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999976688899999999999999999874434455599999999999999988788899999999 8999999999
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 338 (1031)
+..|..+.. .+|++|++++|. .++..+..+.+++...+.-+.+.+. ... .+. +..+.
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~-----------~~~-----~i~---~~~~~ 249 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDM-----------DDE-----DIS---PAVFE 249 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTS-----------CCC-----CCC---GGGGG
T ss_pred ccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccc-----------ccc-----ccC---hhHhc
Confidence 887776655 689999999987 3455666777666666554433321 111 111 11222
Q ss_pred ccc--cCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccc
Q 043316 339 NLS--SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416 (1031)
Q Consensus 339 ~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 416 (1031)
.+. +|+.|++++|.+++..+..|+.+++|++|++++|+++ .+|..+.++++|++|++++|++.+..|..+..+++|+
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 328 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLT 328 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCS
T ss_pred hhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCC
Confidence 222 5677777777777766666777777777777777776 5566677777777777777777777677777777777
Q ss_pred ceeccccccc-cccccccCCCCCCCeeccccccccCcc--cccccCCCccccccCcccccCCCCCCCccCCCCCcEEEee
Q 043316 417 RLRFNQNNLF-GKVYEAFGDHPNLTFLDLSQNNLYGEI--SFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLS 493 (1031)
Q Consensus 417 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls 493 (1031)
+|++++|.+. .++...+..+++|++|++++|.+++.. ...+..+++|++|++++|.+.+..|..+..+++|++|+++
T Consensus 329 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 408 (606)
T 3t6q_A 329 HLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLA 408 (606)
T ss_dssp EEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECT
T ss_pred EEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECC
Confidence 7777777766 344455777777777777777777665 5567777788888888888877788888889999999999
Q ss_pred CCcccCCChh-hhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCC---CcccccCCCccceecccCccc
Q 043316 494 SNHIVGKIPV-QFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSS---IPKSMGNLSKLHYLNLSNNQF 569 (1031)
Q Consensus 494 ~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l 569 (1031)
+|++.+..+. .|..+++|+.|++++|++++..|..|..+++|++|++++|++++. .+..+..+++|++|+|++|++
T Consensus 409 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l 488 (606)
T 3t6q_A 409 FTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL 488 (606)
T ss_dssp TCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCC
T ss_pred CCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCcc
Confidence 9999877654 488899999999999999988888999999999999999999862 336788999999999999999
Q ss_pred CCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 570 NHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 570 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
++..|..|..+++|+.|+|++|++++..|..+..++.| .|+|++|++++.+|..|..+++|+.|++++|+++|..+
T Consensus 489 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 489 SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 98889999999999999999999999999999999999 99999999999999999999999999999999998554
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.6e-59 Score=577.51 Aligned_cols=511 Identities=19% Similarity=0.230 Sum_probs=278.4
Q ss_pred cCCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCC--Ccc------------ceeEeCCCCCEEEEEecCCc
Q 043316 22 SSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISP--CTW------------FGIFCNLVGRVISISLSSLG 87 (1031)
Q Consensus 22 ~~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~--C~w------------~gv~c~~~~~v~~l~l~~~~ 87 (1031)
+++..+|++||++||+++. +| +|+... .+...+| |.| .||+|+..+||++|+|++++
T Consensus 264 ~~~~~~d~~ALl~~k~~l~--~~------~W~~~~-~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALD--GK------NWRYYS-GTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFG 334 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTT--GG------GCCCCC-SSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTC
T ss_pred cccchHHHHHHHHHHHHcC--CC------CCCcCC-CcccccCCccccccccccccccCcCceEecCCCCEEEEECccCC
Confidence 3456789999999999996 43 786111 0112356 999 99999888999999999999
Q ss_pred cccccCCccccCCCcccEEec-CCCcCcCCCccccccC----C-----cCcE------eeC-CCCcccC-----------
Q 043316 88 LNGTFQDFSFSSFPHLMYLNL-SCNVLYGNIPPQISNL----S-----KLRA------LDL-GNNQLSG----------- 139 (1031)
Q Consensus 88 l~g~~~~~~~~~l~~l~~L~l-~~n~~~~~~p~~~~~l----~-----~L~~------L~l-~~n~l~~----------- 139 (1031)
+.|.+|+. |++|++|++|+| ++|.+.|..|...... + .++. ++. ....+++
T Consensus 335 L~G~ip~~-l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~ 413 (876)
T 4ecn_A 335 AKGRVPDA-IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPE 413 (876)
T ss_dssp CEEEECGG-GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTT
T ss_pred CCCcCchH-HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcc
Confidence 99999975 999999999999 9999988755331111 0 0000 000 0000000
Q ss_pred CCCccccccccceEEEeec--cccCCCCCccccCcccCceeeccCcccCC-----------------CCCCccc--cccc
Q 043316 140 VIPQEIGHLTCLRMLYFDV--NHLHGSIPLEIGKLSLINVLTLCHNNFSG-----------------RIPPSLG--NLSN 198 (1031)
Q Consensus 140 ~~p~~~~~l~~L~~L~l~~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~ip~~~~--~l~~ 198 (1031)
..+........++.+.+.. |+++| ||.+|+++++|++|+|++|.++| .+|+.++ ++++
T Consensus 414 ~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~ 492 (876)
T 4ecn_A 414 MKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKD 492 (876)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred ccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCC
Confidence 0010111112223333322 45554 55555555555555555555554 3666655 6666
Q ss_pred ccEEEecccccccccCcccccccccccccccccc-ccc-ccCccccccC-------cccEEEeecCcCCCCCCc--cccc
Q 043316 199 LAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQ-LRG-SIPFSLANLS-------NLGILYLYKNSLFGFIPS--VIGN 267 (1031)
Q Consensus 199 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~p~--~~~~ 267 (1031)
|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|+.|+|++|+++ .+|. .|++
T Consensus 493 L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~ 571 (876)
T 4ecn_A 493 LTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQK 571 (876)
T ss_dssp CCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTT
T ss_pred CCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhc
Confidence 6666666666666666666666666666666665 555 5555555444 5666666666655 4455 5555
Q ss_pred cccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhh-hhhhhccccccCCCCccccccccc--Cc
Q 043316 268 LKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA-LSELGLYINQLDGVIPPSIGNLSS--LR 344 (1031)
Q Consensus 268 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~--L~ 344 (1031)
+++|++|+|++|+++ .+| .|+++++|+.|+|++|+++ .+|..+.++++ |+.|++++|.++ .+|..++.++. |+
T Consensus 572 L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~ 647 (876)
T 4ecn_A 572 MVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMG 647 (876)
T ss_dssp CTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEE
T ss_pred CCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCC
Confidence 566666666666555 555 5555555556665555555 45555555555 555555555555 44554444432 55
Q ss_pred eEEcccCCCcCccCCcc---C--cccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccccee
Q 043316 345 TLYLYDNGFYGLVPNEI---G--YLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLR 419 (1031)
Q Consensus 345 ~L~L~~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 419 (1031)
.|+|++|++++.+|... + .+++|+.|+|++|+++...+..+..+++|+.|++++|++..+.+..+....
T Consensus 648 ~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~------ 721 (876)
T 4ecn_A 648 SVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKD------ 721 (876)
T ss_dssp EEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTT------
T ss_pred EEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcccc------
Confidence 55555555555443211 1 122455555555555522222233445555555555554433222221110
Q ss_pred ccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCcc--CCCCCcEEEeeCCcc
Q 043316 420 FNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIG--DSSKLQVLDLSSNHI 497 (1031)
Q Consensus 420 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~--~l~~L~~L~Ls~N~l 497 (1031)
..+..+++|+.|+|++|+++. +|..+. .+++|+.|+|++|+|
T Consensus 722 -----------~~l~nl~~L~~L~Ls~N~L~~-------------------------lp~~l~~~~l~~L~~L~Ls~N~L 765 (876)
T 4ecn_A 722 -----------GNYKNTYLLTTIDLRFNKLTS-------------------------LSDDFRATTLPYLSNMDVSYNCF 765 (876)
T ss_dssp -----------SCCTTGGGCCEEECCSSCCCC-------------------------CCGGGSTTTCTTCCEEECCSSCC
T ss_pred -----------ccccccCCccEEECCCCCCcc-------------------------chHHhhhccCCCcCEEEeCCCCC
Confidence 001122367777777766653 233333 444555555555555
Q ss_pred cCCChhhhhccccCceeeccc------ccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCC
Q 043316 498 VGKIPVQFEKLFSLNKLILNL------NQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNH 571 (1031)
Q Consensus 498 ~~~~p~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 571 (1031)
++ +|..+..+++|+.|+|++ |++.+.+|..|.++++|++|+|++|++ +.+|..+. ++|+.|+|++|++..
T Consensus 766 ~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 766 SS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp SS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred Cc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 43 344444555555555544 555556666666666666666666666 35555443 456666666665555
Q ss_pred CCchhhccccccCceeccCcccC
Q 043316 572 KIPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 572 ~~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
..+..|.....+..+.|++|++.
T Consensus 842 i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 842 IDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp EECGGGHHHHHTTCCEEECCTTS
T ss_pred cChHHccccccchheeecCCCcc
Confidence 44455544445555555555443
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-58 Score=579.89 Aligned_cols=517 Identities=23% Similarity=0.232 Sum_probs=377.3
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCC-ccccccCCcCcEeeCCCCcccCCCCc
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNI-PPQISNLSKLRALDLGNNQLSGVIPQ 143 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~-p~~~~~l~~L~~L~l~~n~l~~~~p~ 143 (1031)
|.|..|-+ ...+++.|||+++.+++..+ .+|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 67888887 55889999999999987554 45999999999999999887777 67899999999999999999988899
Q ss_pred cccccccceEEEeeccccCCCCCcc--ccCcccCceeeccCcccCCCCC-CcccccccccEEEecccccccccCcccccc
Q 043316 144 EIGHLTCLRMLYFDVNHLHGSIPLE--IGKLSLINVLTLCHNNFSGRIP-PSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220 (1031)
Q Consensus 144 ~~~~l~~L~~L~l~~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~ip-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 220 (1031)
.|+++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..++.+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999888876 9999999999999999997655 579999999999999999999999999988
Q ss_pred --cccccccccccccccccCccccccCc------ccEEEeecCcCCCCCCcccccc---ccccccccccccc--------
Q 043316 221 --NSLSILDLSQNQLRGSIPFSLANLSN------LGILYLYKNSLFGFIPSVIGNL---KSLFELDLSENQL-------- 281 (1031)
Q Consensus 221 --~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l-------- 281 (1031)
++|+.|+|++|.+.+..|..++.+.+ |+.|++++|.+++..|..+... .+++.|+++.+.+
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999999988887776 9999999999998888877653 5677787774433
Q ss_pred -cccCCcccccC--CCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccC
Q 043316 282 -FGSIPLSFSNL--SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP 358 (1031)
Q Consensus 282 -~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 358 (1031)
.+..+..|.++ ++|+.|++++|.+++..|..+..+++|+.|+|++|++++..|..|+.+++|++|+|++|.+++..|
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 22223334333 456666666666665555555666666666666666655555555556666666666666655555
Q ss_pred CccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCC
Q 043316 359 NEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPN 438 (1031)
Q Consensus 359 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 438 (1031)
..|..+++|+.|++++|++++..+..|.++++|++|++++|.++++. .+++|+.|++++|++..++.. ..+
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~l~~~----~~~ 402 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLVTLPKI----NLT 402 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCCCCCCC----CTT
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCccccccc----ccc
Confidence 55555666666666666655555555555555555555555555322 144455555555555433221 234
Q ss_pred CCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChh-hhhccccCceeecc
Q 043316 439 LTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPV-QFEKLFSLNKLILN 517 (1031)
Q Consensus 439 L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~ 517 (1031)
++.|++++|+++++.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+|+
T Consensus 403 l~~L~ls~N~l~~l~~-----------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls 459 (844)
T 3j0a_A 403 ANLIHLSENRLENLDI-----------------------LYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLG 459 (844)
T ss_dssp CCEEECCSCCCCSSTT-----------------------HHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEE
T ss_pred cceeecccCccccCch-----------------------hhhhhcCCccceeeCCCCcccccccccccccCCccccccCC
Confidence 4455555544443221 11234566777777777777654332 34456777777777
Q ss_pred ccccc-----CCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcc
Q 043316 518 LNQLS-----GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592 (1031)
Q Consensus 518 ~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 592 (1031)
+|.++ +..+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|+|++.++..+. ++|+.|||++|+
T Consensus 460 ~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~ 537 (844)
T 3j0a_A 460 ENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQ 537 (844)
T ss_dssp SCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEEC
T ss_pred CCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCc
Confidence 77776 33445677788888888888888877777788888888888888888877776665 678888888888
Q ss_pred cCCcCCccccCcccchhhhcCCCccCCC
Q 043316 593 LQGEIPPQICNMESLEELNLSHNNLFDL 620 (1031)
Q Consensus 593 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 620 (1031)
|++.+|..|. +|+.|++++|++...
T Consensus 538 l~~~~~~~~~---~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 538 LLAPNPDVFV---SLSVLDITHNKFICE 562 (844)
T ss_dssp CCCCCSCCCS---SCCEEEEEEECCCCS
T ss_pred CCCCChhHhC---CcCEEEecCCCcccc
Confidence 8877776653 677888888888763
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.8e-58 Score=564.14 Aligned_cols=535 Identities=21% Similarity=0.205 Sum_probs=421.0
Q ss_pred EecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeecccc
Q 043316 82 SLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL 161 (1031)
Q Consensus 82 ~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l 161 (1031)
+.++.+++ .+|.. + .+++++|+|++|.+++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 17 ~c~~~~l~-~ip~~-~--~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 17 QCMDQKLS-KVPDD-I--PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp ECTTSCCS-SCCTT-S--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EccCCCcc-cCCCC-C--CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 44444443 34442 2 27899999999999988888999999999999999999988889999999999999999999
Q ss_pred CCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCcc
Q 043316 162 HGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFS 240 (1031)
Q Consensus 162 ~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 240 (1031)
++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+++ .+|..|+++++|++|+|++|++++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 98889999999999999999999997777899999999999999999986 67999999999999999999999888888
Q ss_pred ccccCccc----EEEeecCcCCCCCCcccccccccccccccccccc-ccCCcccccCCCCCeeeeccCccCCCCCCCCCC
Q 043316 241 LANLSNLG----ILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF-GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN 315 (1031)
Q Consensus 241 l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 315 (1031)
++.+++|+ .|++++|.+++..+..+... +|++|++++|.++ +.+|..+.++++|+.+++..+.+.+...-.
T Consensus 173 ~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~--- 248 (606)
T 3vq2_A 173 LQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE--- 248 (606)
T ss_dssp THHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS---
T ss_pred hhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccc---
Confidence 88888776 89999999998777666655 8999999999987 466778999999999999877665321100
Q ss_pred hhhhhhhhccccccCCCCcccccccccCceEEc-ccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceE
Q 043316 316 LEALSELGLYINQLDGVIPPSIGNLSSLRTLYL-YDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLV 394 (1031)
Q Consensus 316 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 394 (1031)
.+....+..+..+ +++.+++ ..|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|
T Consensus 249 ------------~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L 312 (606)
T 3vq2_A 249 ------------IFEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSL 312 (606)
T ss_dssp ------------CCCGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEE
T ss_pred ------------ccChHHhhhhhhc-cHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEE
Confidence 0001111122222 3445555 55555555554 5556666666666666542 33 55556666666
Q ss_pred eccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcc--cccccCCCccccccCcccc
Q 043316 395 NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEI--SFNWRNFPKLGTFNASMNN 472 (1031)
Q Consensus 395 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~L~l~~N~ 472 (1031)
++++|++ +.+| .+ .+++|++|++++|...+.. .+..+++|+.|++++|++++.. ...+..++.|++|++++|.
T Consensus 313 ~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 387 (606)
T 3vq2_A 313 SIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNG 387 (606)
T ss_dssp EEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCS
T ss_pred EcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCc
Confidence 6666666 3333 33 5666666666666433222 4556666777777777666553 4555666777777777777
Q ss_pred cCCCCCCCccCCCCCcEEEeeCCcccCCCh-hhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCC-CCc
Q 043316 473 IYGSIPPEIGDSSKLQVLDLSSNHIVGKIP-VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS-SIP 550 (1031)
Q Consensus 473 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p 550 (1031)
+.+ +|..+..+++|++|++++|++.+..| ..|..+++|+.|++++|++++..|..|..+++|++|++++|++++ .+|
T Consensus 388 l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 466 (606)
T 3vq2_A 388 AII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLS 466 (606)
T ss_dssp EEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEEC
T ss_pred ccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchH
Confidence 664 55778888999999999999988777 688899999999999999998889999999999999999999987 478
Q ss_pred ccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCC-
Q 043316 551 KSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMR- 629 (1031)
Q Consensus 551 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~- 629 (1031)
..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++.+|..+..+++|++|+|++|+|+.+ |..+..++
T Consensus 467 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-p~~~~~l~~ 545 (606)
T 3vq2_A 467 NVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETS-KGILQHFPK 545 (606)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCE-ESCGGGSCT
T ss_pred HhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCccc-CHhHhhhcc
Confidence 8899999999999999999988899999999999999999999988899999999999999999999865 65588887
Q ss_pred cceEEecccccccCCCCC
Q 043316 630 SLSRIDIAYNELQGPIPN 647 (1031)
Q Consensus 630 ~L~~L~l~~N~l~~~~p~ 647 (1031)
+|+.|++++|++.|..+.
T Consensus 546 ~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 546 SLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TCCEEECCSCCCCCSSTT
T ss_pred cCcEEEccCCCcccCCcc
Confidence 599999999999986653
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.6e-57 Score=552.61 Aligned_cols=533 Identities=23% Similarity=0.216 Sum_probs=401.1
Q ss_pred CCCCccc----eeEeCCC----------CCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcC
Q 043316 62 ISPCTWF----GIFCNLV----------GRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKL 127 (1031)
Q Consensus 62 ~~~C~w~----gv~c~~~----------~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L 127 (1031)
.+||.|. .|.|... .+++.|+|+++.+.+..+ ..|.++++|++|+|++|.+++..|..|+++++|
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 3667663 5778541 468999999999987544 459999999999999999998888899999999
Q ss_pred cEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCC-CCCCcccccccccEEEecc
Q 043316 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG-RIPPSLGNLSNLAYLYLNN 206 (1031)
Q Consensus 128 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~ip~~~~~l~~L~~L~l~~ 206 (1031)
++|+|++|.+++..|..|+++++|++|++++|++++..|..++++++|++|+|++|.+++ .+|..++++++|++|++++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999998889999999999999999999997777899999999999999999986 6899999999999999999
Q ss_pred cccccccCcccccccccc----cccccccccccccCccccccCcccEEEeecCcCC-CCCCccccccccccccccccccc
Q 043316 207 NSLFGSIPNVMGNLNSLS----ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF-GFIPSVIGNLKSLFELDLSENQL 281 (1031)
Q Consensus 207 n~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l 281 (1031)
|++++..|..|+.+++|+ +|++++|++++..+..+.. .+|+.|++++|.++ +..|..+.++++|+.+++..+.+
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~ 241 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEF 241 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcceeCcccccC-ceeeeeeccCCccchhHHHHHhcccccccccccccccc
Confidence 999988888999998876 7999999999655555554 49999999999997 45678899999999999987765
Q ss_pred cccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhc-cccccCCCCcccccccccCceEEcccCCCcCccCCc
Q 043316 282 FGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGL-YINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360 (1031)
Q Consensus 282 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 360 (1031)
.+... +..+ ....+..+..+ .++.+++ ..|.+.+.+|. +..+++|+.|++++|.+... | .
T Consensus 242 ~~~~~--------l~~~-------~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~ 302 (606)
T 3vq2_A 242 KDERN--------LEIF-------EPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-D 302 (606)
T ss_dssp TTSCC--------CSCC-------CGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-C
T ss_pred ccCCc--------cccc-------ChHHhhhhhhc-cHhheeccccccccccccc-cccCCCCCEEEecCccchhh-h-h
Confidence 43211 0000 00001111111 2233333 33444444444 55555555555555555332 3 4
Q ss_pred cCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecccccccccc--ccccCCCCC
Q 043316 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV--YEAFGDHPN 438 (1031)
Q Consensus 361 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~ 438 (1031)
+..+++|++|++++|++ +.+| .+ .+++|++|++++|+..+.. .+..+++|++|++++|++.+.. +..+..+++
T Consensus 303 l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~ 377 (606)
T 3vq2_A 303 VPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS 377 (606)
T ss_dssp CCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSC
T ss_pred ccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCc
Confidence 55555555555555555 3444 23 5555555555555333222 3445555566666655555443 445555666
Q ss_pred CCeeccccccccCcccccccCCCccccccCcccccCCCCC-CCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecc
Q 043316 439 LTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIP-PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILN 517 (1031)
Q Consensus 439 L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 517 (1031)
|++|++++|.+++++ ..+..+++|++|++++|.+.+..| ..+..+++|++|++++|++.+..|..|.++++|+.|+++
T Consensus 378 L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 456 (606)
T 3vq2_A 378 LRHLDLSFNGAIIMS-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMA 456 (606)
T ss_dssp CCEEECCSCSEEEEC-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred ccEeECCCCccccch-hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECC
Confidence 666666666665544 455666666666666677766666 578888899999999999988888889999999999999
Q ss_pred cccccC-CCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCc
Q 043316 518 LNQLSG-GVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGE 596 (1031)
Q Consensus 518 ~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 596 (1031)
+|++++ .+|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++.+|..|..+++|+.|||++|+|+ .
T Consensus 457 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~ 535 (606)
T 3vq2_A 457 GNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-T 535 (606)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-C
T ss_pred CCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-c
Confidence 999987 47888999999999999999999888888999999999999999999888999999999999999999998 6
Q ss_pred CCccccCcc-cchhhhcCCCccCCCCc
Q 043316 597 IPPQICNME-SLEELNLSHNNLFDLIP 622 (1031)
Q Consensus 597 ~p~~~~~l~-~L~~L~L~~N~l~~~~~ 622 (1031)
+|..+..++ +|++|++++|++....+
T Consensus 536 ~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 536 SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 777788887 59999999999986433
No 12
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.3e-57 Score=551.93 Aligned_cols=523 Identities=21% Similarity=0.215 Sum_probs=386.9
Q ss_pred cceeEeCCC----------CCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCc
Q 043316 67 WFGIFCNLV----------GRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQ 136 (1031)
Q Consensus 67 w~gv~c~~~----------~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 136 (1031)
+.-|.|... ..++.|+|+++.+++.. +..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQ-NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEEC-TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCC-hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 445778542 36899999999998654 4559999999999999999999889999999999999999999
Q ss_pred ccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcc
Q 043316 137 LSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV 216 (1031)
Q Consensus 137 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~ 216 (1031)
+++..|..|+++++|++|++++|++++..|..++++++|++|+|++|.+++..++.+..+++|++|++++|.+++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99888999999999999999999999766888999999999999999999744345555999999999999999888889
Q ss_pred cccccccc--cccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc-----ccCCccc
Q 043316 217 MGNLNSLS--ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF-----GSIPLSF 289 (1031)
Q Consensus 217 ~~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~ 289 (1031)
|+.+++|+ .|++++|++++..|..+.. .+|+.|++++|. .++..+..+.+++...+..+.+. ...+..|
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHh
Confidence 99999999 8999999999877766654 689999999987 34455555555443333322221 1112233
Q ss_pred ccCC--CCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCccccc
Q 043316 290 SNLS--SLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSL 367 (1031)
Q Consensus 290 ~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 367 (1031)
..+. +|+.|++++|.+++..+..|+++++|++|++++|+++ .+|..++.+++|++|++++|.+++..|..+..+++|
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 3333 6777777777777666666777777777777777777 566677777777777777777777667677777777
Q ss_pred ceEEccccccCCCccc-cccCCCCCceEeccCcccCCcC--chhccCCccccceeccccccccccccccCCCCCCCeecc
Q 043316 368 SKLELCRNHLSGVIPH-SIGNLTKLVLVNMCENHLFGLI--PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDL 444 (1031)
Q Consensus 368 ~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 444 (1031)
++|++++|.+.+.+|. .+..+++|++|++++|++.+.. +..|..+++|++|++++|++.++.+..|..+++|+.|++
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 7777777777655443 4667777777777777766654 555666666666666666666666666666666666666
Q ss_pred ccccccCcccccccCCCccccccCcccccCCCCCC-CccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccC
Q 043316 445 SQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPP-EIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSG 523 (1031)
Q Consensus 445 s~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 523 (1031)
++|++++ ..+. .+..+++|++|++++|.+.+..|..|..+++|+.|++++|++++
T Consensus 408 ~~n~l~~------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 463 (606)
T 3t6q_A 408 AFTRLKV------------------------KDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPK 463 (606)
T ss_dssp TTCCEEC------------------------CTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGG
T ss_pred CCCcCCC------------------------cccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCc
Confidence 6655543 3332 35566666666666666666666666666677777777776664
Q ss_pred C---CcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcc
Q 043316 524 G---VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ 600 (1031)
Q Consensus 524 ~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 600 (1031)
. .+..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..++.| .|+|++|++++..|..
T Consensus 464 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~ 542 (606)
T 3t6q_A 464 GNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSL 542 (606)
T ss_dssp GEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGG
T ss_pred cccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhh
Confidence 2 22456677777777777777776667777777777777777777777777777777777 7777777777666666
Q ss_pred ccCcccchhhhcCCCccCCC
Q 043316 601 ICNMESLEELNLSHNNLFDL 620 (1031)
Q Consensus 601 ~~~l~~L~~L~L~~N~l~~~ 620 (1031)
+..+++|+.|++++|++...
T Consensus 543 ~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 543 LPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp HHHHHTSSEEECTTCCEECS
T ss_pred cccCCCCCEEeCCCCCcccc
Confidence 77777777777777777654
No 13
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.7e-54 Score=521.89 Aligned_cols=467 Identities=17% Similarity=0.230 Sum_probs=390.5
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcc------cC------CCCccccccccceEEEeeccccCCCCCcc
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQL------SG------VIPQEIGHLTCLRMLYFDVNHLHGSIPLE 168 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l------~~------~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 168 (1031)
.+++.|+|++|++.|.+|+++++|++|++|||++|.+ .| .+|... +..|+ ++++.|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4789999999999999999999999999999999976 33 455554 66778 888888888888877
Q ss_pred ccC-cccCceeeccCcccCCCCCCcccccccccEEEec--ccccccccCcccccccccccccccccccccc---------
Q 043316 169 IGK-LSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN--NNSLFGSIPNVMGNLNSLSILDLSQNQLRGS--------- 236 (1031)
Q Consensus 169 ~~~-l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~--~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------- 236 (1031)
++. +..+..+++....+.. .....++.+++. .|+++| +|..|+++++|++|+|++|+++|.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 763 3445555555443331 122334444443 689998 999999999999999999999986
Q ss_pred --------cCcccc--ccCcccEEEeecCcCCCCCCcccccccccccccccccc-ccc-cCCcccccC------CCCCee
Q 043316 237 --------IPFSLA--NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ-LFG-SIPLSFSNL------SSLTLM 298 (1031)
Q Consensus 237 --------~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L 298 (1031)
+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 999999 99999999999999999999999999999999999998 998 899988887 999999
Q ss_pred eeccCccCCCCCC--CCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccc-cceEEcccc
Q 043316 299 SLFNNSLSGSIPP--TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS-LSKLELCRN 375 (1031)
Q Consensus 299 ~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N 375 (1031)
++++|+++ .+|. .++++++|++|++++|+++|.+| .++.+++|++|+|++|+++ .+|..+..+++ |++|++++|
T Consensus 311 ~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 311 YIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp ECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred ECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 99999999 8998 99999999999999999999999 9999999999999999998 77888999999 999999999
Q ss_pred ccCCCccccccCCC--CCceEeccCcccCCcCchhcc-------CCccccceeccccccccccccccCCCCCCCeecccc
Q 043316 376 HLSGVIPHSIGNLT--KLVLVNMCENHLFGLIPKSFR-------NLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446 (1031)
Q Consensus 376 ~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 446 (1031)
+++ .+|..+..++ +|++|++++|++.+..|..|. .+++|++|++++|++..++...+..+++|+.|+|++
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG 466 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC
Confidence 999 7788888765 999999999999999999998 888999999999999988888888999999999999
Q ss_pred ccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhh--ccccCceeecccccccCC
Q 043316 447 NNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE--KLFSLNKLILNLNQLSGG 524 (1031)
Q Consensus 447 N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~ 524 (1031)
|+++.++...+... +..+..+++|++|+|++|+|+ .+|..+. .+++|+.|+|++|++++
T Consensus 467 N~l~~i~~~~~~~~-----------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~- 527 (636)
T 4eco_A 467 NMLTEIPKNSLKDE-----------------NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK- 527 (636)
T ss_dssp SCCSBCCSSSSEET-----------------TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-
T ss_pred CCCCCcCHHHhccc-----------------cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-
Confidence 99885544333211 111234558999999999999 6777776 89999999999999997
Q ss_pred CcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCc
Q 043316 525 VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNM 604 (1031)
Q Consensus 525 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 604 (1031)
+|..+..+++|++|+|++|+ ++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+.
T Consensus 528 ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-- 586 (636)
T 4eco_A 528 FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-- 586 (636)
T ss_dssp CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--
T ss_pred cChhhhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--
Confidence 89999999999999997765 4556666666666666666666666766666 35565554
Q ss_pred ccchhhhcCCCccCCCC
Q 043316 605 ESLEELNLSHNNLFDLI 621 (1031)
Q Consensus 605 ~~L~~L~L~~N~l~~~~ 621 (1031)
++|+.|+|++|++..+.
T Consensus 587 ~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 587 PNISVLDIKDNPNISID 603 (636)
T ss_dssp TTCCEEECCSCTTCEEE
T ss_pred CcCCEEECcCCCCcccc
Confidence 56777777777665543
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-52 Score=506.14 Aligned_cols=512 Identities=22% Similarity=0.222 Sum_probs=383.8
Q ss_pred ccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
.+..+.++.+++ .+|..+. +++++|||++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 356788888887 7887654 5799999999999977788899999999999999999876677899999999999999
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCccccccccccccccccccccc-ccCccccccCcccEEEeecCcCCCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNSLFGFI 261 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~ 261 (1031)
|.+++..|..|+++++|++|++++|++++..+..|+++++|++|+|++|++++ .+|..++++++|++|++++|++++..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~ 165 (570)
T 2z63_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (570)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEEC
T ss_pred CcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceec
Confidence 99987777889999999999999999986555578999999999999999986 47888999999999999999998888
Q ss_pred Cccccccccc----cccccccccccccCCcccccCCCCCeeeeccCccCC-CCCCCCCChhhhhhhhccccccCC-----
Q 043316 262 PSVIGNLKSL----FELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG-SIPPTQGNLEALSELGLYINQLDG----- 331 (1031)
Q Consensus 262 p~~~~~l~~L----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~----- 331 (1031)
|..++.+++| +.|++++|.+++..|..|..+ +|+.|++++|.... .++..+.++++++.+.+..+.+..
T Consensus 166 ~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 244 (570)
T 2z63_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244 (570)
T ss_dssp GGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCE
T ss_pred HHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhh
Confidence 8888888888 788999999988777777666 78889888875432 122333344444444333222211
Q ss_pred -CCcccccccccCceEEcccCCCcCccCCccCcccccceEEcccc-ccCCCccccccCCCCCceEeccCcccCCcCchhc
Q 043316 332 -VIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN-HLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409 (1031)
Q Consensus 332 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 409 (1031)
.....+..++++ .++.+++++| .+.+..|..+..+++|+.|++++|.+.+ +|..+
T Consensus 245 ~~~~~~~~~l~~l----------------------~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~ 301 (570)
T 2z63_A 245 KFDKSALEGLCNL----------------------TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFS 301 (570)
T ss_dssp ECCTTTTGGGGGS----------------------EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCC
T ss_pred hcchhhhcccccc----------------------chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhh
Confidence 111112222111 1334444444 3444444444444455555555544443 23334
Q ss_pred cCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCC--CCCccCCCCC
Q 043316 410 RNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSI--PPEIGDSSKL 487 (1031)
Q Consensus 410 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~--p~~~~~l~~L 487 (1031)
..+ +|++|++++|.+..++. ..+++|+.|++++|.+.+.... ..+++|++|++++|.+.+.. |..+..+++|
T Consensus 302 ~~~-~L~~L~l~~n~~~~l~~---~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L 375 (570)
T 2z63_A 302 YNF-GWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSL 375 (570)
T ss_dssp SCC-CCSEEEEESCBCSSCCB---CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCC
T ss_pred ccC-CccEEeeccCcccccCc---ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCcc
Confidence 444 55555555554443332 2344555555555555443322 44555666666666555433 5567788899
Q ss_pred cEEEeeCCcccCCChhhhhccccCceeecccccccCCCc-ccccccCccceeecCcCcCCCCCcccccCCCccceecccC
Q 043316 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVP-LEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566 (1031)
Q Consensus 488 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 566 (1031)
++|++++|++.+..+. +..+++|+.|++++|++++..+ ..+..+++|++|++++|++++..|..+..+++|++|+|++
T Consensus 376 ~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 454 (570)
T 2z63_A 376 KYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 454 (570)
T ss_dssp CEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcC
Confidence 9999999999865554 8899999999999999997766 5788999999999999999988899999999999999999
Q ss_pred cccC-CCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCC
Q 043316 567 NQFN-HKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPI 645 (1031)
Q Consensus 567 N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 645 (1031)
|+++ +.+|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++.+|..|..+++|+.|++++|+++|..
T Consensus 455 n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 455 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 9997 568899999999999999999999888999999999999999999999998889999999999999999999988
Q ss_pred CCC
Q 043316 646 PNS 648 (1031)
Q Consensus 646 p~~ 648 (1031)
|..
T Consensus 535 ~~~ 537 (570)
T 2z63_A 535 PRI 537 (570)
T ss_dssp TTT
T ss_pred cch
Confidence 864
No 15
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.6e-52 Score=499.36 Aligned_cols=490 Identities=22% Similarity=0.212 Sum_probs=318.2
Q ss_pred CCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCc
Q 043316 64 PCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQ 143 (1031)
Q Consensus 64 ~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~ 143 (1031)
.|.|.|| |+..+ ++++ .+|+. + .++|++|+|++|++++..|..++++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~~~---------~~l~-~ip~~-~--~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGRS---------RSFT-SIPSG-L--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EECTT---------SCCS-SCCSC-C--CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EECCC---------Cccc-ccccc-C--CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999999 96532 2332 34543 2 26889999999999888888899999999999999999877778
Q ss_pred cccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCC-CCCCcccccccccEEEecccccccccC-ccccccc
Q 043316 144 EIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG-RIPPSLGNLSNLAYLYLNNNSLFGSIP-NVMGNLN 221 (1031)
Q Consensus 144 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~ip~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~ 221 (1031)
.|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+| ..|++++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 88899999999999999887666678888899999999998886 467788888888888888888555555 5788888
Q ss_pred ccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccC--Cc-ccccCCCCCee
Q 043316 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI--PL-SFSNLSSLTLM 298 (1031)
Q Consensus 222 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~-~~~~l~~L~~L 298 (1031)
+|++|++++|++++.+|..++.+++|+.|+++.|.+....+..+..+++|++|++++|++++.. |. ....+++|+.|
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L 228 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKL 228 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccce
Confidence 8888888888888888888888888888888888776433333455777777788777777532 11 22345666666
Q ss_pred eeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCcc------CCccCcccccceEEc
Q 043316 299 SLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLV------PNEIGYLKSLSKLEL 372 (1031)
Q Consensus 299 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L 372 (1031)
++++|.+++..+. .++..+..+++|+.|++++|.+.+.. ...+..+.+|+.|++
T Consensus 229 ~l~~n~l~~~~~~--------------------~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 229 AFRGSVLTDESFN--------------------ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp EEESCEEEHHHHH--------------------HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred eccccccchhHHH--------------------HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 6666665532211 11223345566666666666665431 123455666777777
Q ss_pred cccccCCC-----ccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccc---cccCCCCCCCeecc
Q 043316 373 CRNHLSGV-----IPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVY---EAFGDHPNLTFLDL 444 (1031)
Q Consensus 373 ~~N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L 444 (1031)
.++.+... ++..+....+|+.|++++|++..+....+..+++|++|++++|++.+..+ ..++.+++|+.|+|
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~L 368 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVL 368 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEEC
T ss_pred cccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEc
Confidence 77665422 12223345667777777777765444444567777777777777766543 23566777777777
Q ss_pred ccccccCccc--ccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeeccccccc
Q 043316 445 SQNNLYGEIS--FNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLS 522 (1031)
Q Consensus 445 s~N~l~~~~~--~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 522 (1031)
++|+++++.. ..+..+++|++|++++|+++ .+|..+..+++|++|++++|++++
T Consensus 369 s~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~----------------------- 424 (549)
T 2z81_A 369 SQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV----------------------- 424 (549)
T ss_dssp TTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-----------------------
T ss_pred cCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-----------------------
Confidence 7777765432 23444555555555555554 344455555555555555555542
Q ss_pred CCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcccc
Q 043316 523 GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQIC 602 (1031)
Q Consensus 523 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 602 (1031)
+|..+ .++|++|+|++|++++.. ..+++|++|+|++|+|+ .+|. ...+++|+.|||++|++++.+|..+.
T Consensus 425 --l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~ 494 (549)
T 2z81_A 425 --VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFD 494 (549)
T ss_dssp --CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGG
T ss_pred --ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHh
Confidence 22211 135555666666555421 34556666666666665 2333 34456666666666666655555566
Q ss_pred CcccchhhhcCCCccCCCC
Q 043316 603 NMESLEELNLSHNNLFDLI 621 (1031)
Q Consensus 603 ~l~~L~~L~L~~N~l~~~~ 621 (1031)
.+++|+.|+|++|++.+..
T Consensus 495 ~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 495 RLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp GCTTCCEEECCSSCBCCCH
T ss_pred cCcccCEEEecCCCccCCC
Confidence 6666666666666665543
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-51 Score=497.27 Aligned_cols=489 Identities=21% Similarity=0.204 Sum_probs=362.8
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|.+++..|..++++++|++|||++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 57999999999999888889999999999999999999877888999999999999999999777789999999999999
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCcc----cEEEeecC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL----GILYLYKN 255 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L----~~L~L~~N 255 (1031)
++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..|..++.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999996555579999999999999999987 579999999999999999999998888889999999 89999999
Q ss_pred cCCCCCCccccccccccccccccccccc-cCCcccccCCCCCeeeeccCccCC------CCCCCCCChhh--hhhhhccc
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFG-SIPLSFSNLSSLTLMSLFNNSLSG------SIPPTQGNLEA--LSELGLYI 326 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~~--L~~L~L~~ 326 (1031)
.+++..|..+..+ +|++|++++|.... .+|..+.++++++.+.+..+.+.. .....+..+.+ ++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 9999888888776 89999999986542 345677788888877776543321 22233444443 45566777
Q ss_pred c-ccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcC
Q 043316 327 N-QLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI 405 (1031)
Q Consensus 327 N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 405 (1031)
+ .+.+.+|..++.+++|++|++++|.+++ +|..+..+ +|++|++++|.+. .+|. ..+++|+.|++++|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 6 7778888889999999999999999874 67778888 9999999999987 4454 47788888999888887665
Q ss_pred chhccCCccccceecccccccccc--ccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccC
Q 043316 406 PKSFRNLTSLERLRFNQNNLFGKV--YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGD 483 (1031)
Q Consensus 406 ~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~ 483 (1031)
+. ..+++|++|++++|++.+.. +..+..+++|+.|++++|.+++.... +..+
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l----------------------- 395 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGL----------------------- 395 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETC-----------------------
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-cccc-----------------------
Confidence 54 67778888888888877665 56677777788888887777654433 4444
Q ss_pred CCCCcEEEeeCCcccCCCh-hhhhccccCceeecccccccCCCcccccccCccceeecCcCcCC-CCCcccccCCCccce
Q 043316 484 SSKLQVLDLSSNHIVGKIP-VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS-SSIPKSMGNLSKLHY 561 (1031)
Q Consensus 484 l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~ 561 (1031)
++|++|++++|.+.+..+ ..+..+++|+.|++++|++++..|..|..+++|++|+|++|+++ +.+|..+..+++|++
T Consensus 396 -~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 396 -EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp -TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred -CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 445555555555544333 23444555555555555555455555555555555555555554 345555555555555
Q ss_pred ecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCc
Q 043316 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIP 622 (1031)
Q Consensus 562 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 622 (1031)
|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++++..|
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 5555555555555555555555555555555555555555555566666666666555433
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.3e-51 Score=495.17 Aligned_cols=489 Identities=20% Similarity=0.216 Sum_probs=354.1
Q ss_pred cCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEec
Q 043316 126 KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN 205 (1031)
Q Consensus 126 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~ 205 (1031)
...+.|.++|.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 6 ~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 6 ASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp TTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 3345678888888 7777664 688888888888887777888888888888888888887777888888888888888
Q ss_pred ccccccccCccccccccccccccccccccc-ccCccccccCcccEEEeecCcCCCCC-Cccccccccccccccccccccc
Q 043316 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNSLFGFI-PSVIGNLKSLFELDLSENQLFG 283 (1031)
Q Consensus 206 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~ 283 (1031)
+|++++..|..|+++++|++|+|++|++++ ..|..++++++|++|++++|.+.+.+ +..|.++++|++|++++|++++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 888887666678888888888888888875 35677888888888888888744444 4578888888888888888887
Q ss_pred cCCcccccCCCCCeeeeccCccCCCCCCC-CCChhhhhhhhccccccCCCC--c-ccccccccCceEEcccCCCcCccCC
Q 043316 284 SIPLSFSNLSSLTLMSLFNNSLSGSIPPT-QGNLEALSELGLYINQLDGVI--P-PSIGNLSSLRTLYLYDNGFYGLVPN 359 (1031)
Q Consensus 284 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~L~~L~L~~N~l~~~~p~ 359 (1031)
.+|..+..+++|+.|++++|.+. .+|.. +..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+.
T Consensus 163 ~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 163 YQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp ECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred cChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 77888888888888888887765 23332 234566666666666666531 1 1123355666666666665543332
Q ss_pred ----ccCcccccceEEccccccCCCc------cccccCCCCCceEeccCcccCCcCchhccCCccccceecccccccccc
Q 043316 360 ----EIGYLKSLSKLELCRNHLSGVI------PHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKV 429 (1031)
Q Consensus 360 ----~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 429 (1031)
.+..+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+..... +.. .
T Consensus 242 ~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~--~~~-----------------l 302 (549)
T 2z81_A 242 ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL--FYD-----------------L 302 (549)
T ss_dssp HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG--SCC-----------------C
T ss_pred HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh--ccc-----------------c
Confidence 2344555666666666554321 1122334444444444444332100 000 0
Q ss_pred ccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCC---CCccCCCCCcEEEeeCCcccCCCh--hh
Q 043316 430 YEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIP---PEIGDSSKLQVLDLSSNHIVGKIP--VQ 504 (1031)
Q Consensus 430 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~ 504 (1031)
...+...++|+.|++++|+++.++...+..+++|++|++++|.+.+.+| ..++.+++|++|+|++|++++..+ ..
T Consensus 303 ~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 382 (549)
T 2z81_A 303 STVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEI 382 (549)
T ss_dssp CHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHH
T ss_pred hhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhh
Confidence 1112223456666666666665554444566666666666676665543 346788999999999999986543 56
Q ss_pred hhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccC
Q 043316 505 FEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLS 584 (1031)
Q Consensus 505 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 584 (1031)
+..+++|+.|++++|+++ .+|..+..+++|++|++++|+++ .+|..+. ++|++|+|++|+|++.+ ..+++|+
T Consensus 383 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~ 454 (549)
T 2z81_A 383 LLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQ 454 (549)
T ss_dssp GGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCC
T ss_pred hhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhc
Confidence 899999999999999999 68889999999999999999998 4555443 68999999999998753 5789999
Q ss_pred ceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCCC
Q 043316 585 ELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPN 647 (1031)
Q Consensus 585 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 647 (1031)
+|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..|..+++|+.|++++|+++|..|.
T Consensus 455 ~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 455 ELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp EEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred EEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 9999999998 6775 56799999999999999999999999999999999999999987763
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.4e-51 Score=507.62 Aligned_cols=488 Identities=17% Similarity=0.198 Sum_probs=310.8
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeC-CCCcccCCCCcccccc----c-----cceEEEe-------eccccC-
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDL-GNNQLSGVIPQEIGHL----T-----CLRMLYF-------DVNHLH- 162 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l-~~n~l~~~~p~~~~~l----~-----~L~~L~l-------~~n~l~- 162 (1031)
.+++.|+|++|++.|.+|++|++|++|++||| ++|.++|..|-.-... . .++..+. ....+.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 9999988755332111 0 0110000 000000
Q ss_pred ----------CCCCccccCcccCceeeccC--cccCCCCCCcccccccccEEEecccccccc-cCccccccccccccccc
Q 043316 163 ----------GSIPLEIGKLSLINVLTLCH--NNFSGRIPPSLGNLSNLAYLYLNNNSLFGS-IPNVMGNLNSLSILDLS 229 (1031)
Q Consensus 163 ----------~~~p~~~~~l~~L~~L~L~~--n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~L~ 229 (1031)
...+........++.+.+.. |+++| ||..|++|++|++|+|++|+++|. +|..+. .++
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~--------~~s 473 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE--------DAN 473 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS--------CTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccc--------ccc
Confidence 01121223334455555554 99998 999999999999999999999982 222111 112
Q ss_pred ccccccccCcccc--ccCcccEEEeecCcCCCCCCcccccccccccccccccc-ccc-cCCcccccCC-------CCCee
Q 043316 230 QNQLRGSIPFSLA--NLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ-LFG-SIPLSFSNLS-------SLTLM 298 (1031)
Q Consensus 230 ~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L 298 (1031)
.|.++|.+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|+.|
T Consensus 474 ~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L 553 (876)
T 4ecn_A 474 SDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIF 553 (876)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEE
T ss_pred cccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEE
Confidence 2444444555444 55555555555555555555555555555555555554 444 4444443333 55555
Q ss_pred eeccCccCCCCCC--CCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccc-cceEEcccc
Q 043316 299 SLFNNSLSGSIPP--TQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS-LSKLELCRN 375 (1031)
Q Consensus 299 ~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N 375 (1031)
+|++|+++ .+|. .++++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|
T Consensus 554 ~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N 629 (876)
T 4ecn_A 554 YMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHN 629 (876)
T ss_dssp ECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSS
T ss_pred EeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCC
Confidence 55555555 4444 4555555555555555555 444 4555555555555555555 44545555555 555555555
Q ss_pred ccCCCccccccCCCC--CceEeccCcccCCcCchhc---c--CCccccceeccccccccccccccCCCCCCCeecccccc
Q 043316 376 HLSGVIPHSIGNLTK--LVLVNMCENHLFGLIPKSF---R--NLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNN 448 (1031)
Q Consensus 376 ~l~~~~p~~~~~l~~--L~~L~l~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 448 (1031)
+++ .+|..+..++. |+.|++++|++.+.+|... . .+.+|+.|++++|++..++...+..+++|+.|+|++|+
T Consensus 630 ~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~ 708 (876)
T 4ecn_A 630 KLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNL 708 (876)
T ss_dssp CCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCC
T ss_pred CCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCc
Confidence 555 44444444432 5555555555555433221 1 23467778888887777766667778888888888888
Q ss_pred ccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhh--ccccCceeecccccccCCCc
Q 043316 449 LYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFE--KLFSLNKLILNLNQLSGGVP 526 (1031)
Q Consensus 449 l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~ 526 (1031)
++.++...+.. .+..+.++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|
T Consensus 709 L~~ip~~~~~~-----------------~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp 769 (876)
T 4ecn_A 709 MTSIPENSLKP-----------------KDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FP 769 (876)
T ss_dssp CSCCCTTSSSC-----------------TTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CC
T ss_pred CCccChHHhcc-----------------ccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cc
Confidence 77444332211 1112334568999999999999 6788886 89999999999999996 78
Q ss_pred ccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCccc
Q 043316 527 LEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMES 606 (1031)
Q Consensus 527 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 606 (1031)
..+..+++|+.|+|++|+ ++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++
T Consensus 770 ~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~ 828 (876)
T 4ecn_A 770 TQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQ 828 (876)
T ss_dssp CGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SS
T ss_pred hhhhcCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CC
Confidence 889999999999999876 5667777777777777777777777777777 46776655 57
Q ss_pred chhhhcCCCccCCCCccccccCCcceEEeccccccc
Q 043316 607 LEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQ 642 (1031)
Q Consensus 607 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 642 (1031)
|+.|+|++|++..+.+..|.....+..+.+.+|++.
T Consensus 829 L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 829 LYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp SCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred CCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 777888888777776666666656666677777655
No 19
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.2e-50 Score=440.21 Aligned_cols=254 Identities=25% Similarity=0.404 Sum_probs=208.0
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|.+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC----hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 57888999999999999999753 47889999997542 234678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCC----------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA----------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1031)
..++||||+++|+|.++++... ....++|.++..|+.|||+||+|||++ +||||||||+|||++.++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999997642 234689999999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhH
Q 043316 903 EAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~ 979 (1031)
.+||+|||+|+........ .....||+.|||||++.++.++.++|||||||++|||+| |+.||...... . ..
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~---~~ 240 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--E---VI 240 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--H---HH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--H---HH
Confidence 9999999999876433221 223568999999999999999999999999999999999 89998755431 1 22
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..+........+.. ...++.+++.+||+.||++|||++||.+.|+
T Consensus 241 ~~i~~~~~~~~p~~------~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 241 ECITQGRVLQRPRT------CPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHcCCCCCCCcc------chHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22222222222211 1235778999999999999999999999886
No 20
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.1e-50 Score=438.11 Aligned_cols=256 Identities=22% Similarity=0.318 Sum_probs=208.7
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
.+++..++||+|+||+||+|.+ .+++.||||+++... +....++|.+|+.++++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 4567788999999999999975 256899999997643 2345678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
..++||||+++|+|.+++..... ...+++.++.+|+.|||+||+|||++ +||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence 99999999999999999965321 24589999999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhh
Q 043316 900 SEHEAHVSDFGIAKFLNPHS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~ 976 (1031)
+++++||+|||+|+...... .......||++|||||++.++.++.++|||||||++|||+| |+.||...... .
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~-- 255 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--D-- 255 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--H--
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--H--
Confidence 99999999999998764322 22345678999999999999999999999999999999999 89998755431 1
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+........+ .. ....+.+++.+||+.||++|||++||++.|+.
T Consensus 256 -~~~~i~~~~~~~~p---~~---~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 256 -VVEMIRNRQVLPCP---DD---CPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp -HHHHHHTTCCCCCC---TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -HHHHHHcCCCCCCc---cc---chHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 22222222111112 11 22357789999999999999999999999973
No 21
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=440.88 Aligned_cols=254 Identities=25% Similarity=0.406 Sum_probs=203.3
Q ss_pred hccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|...++||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS----ESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 56788899999999999999753 47899999997542 345678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
..++||||+++|+|.++++.... ..+++|.++..|+.|||+||+|||++ +||||||||+|||++.
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 99999999999999999976432 24589999999999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhh
Q 043316 901 EHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSN 977 (1031)
Q Consensus 901 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~ 977 (1031)
++.+||+|||+|+....... ......||+.|||||++.+..++.++|||||||++|||+| |+.||...... .
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-----~ 268 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-----E 268 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----H
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 99999999999987643322 2234678999999999999999999999999999999999 89998755431 1
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+........+.. ...++.+++.+||+.||++|||++||++.|+
T Consensus 269 ~~~~i~~g~~~~~p~~------~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 269 AIDCITQGRELERPRA------CPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp HHHHHHHTCCCCCCTT------CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCCccc------ccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 2222222222222221 1235778999999999999999999999886
No 22
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.6e-50 Score=444.37 Aligned_cols=249 Identities=26% Similarity=0.382 Sum_probs=210.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
..|+..++||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+++.+|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG----CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4589999999999999999965 579999999997543 23456688999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++... .+++.++..++.||+.||+|||++ |||||||||+|||++.+|++||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 9999999999999753 489999999999999999999999 999999999999999999999999999998766
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.....+..+..
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i~~~~~~~~~~~---- 293 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKMIRDNLPPRLKNL---- 293 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSSCCCCSCG----
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHcCCCCCCCcc----
Confidence 55556778999999999999999999999999999999999999999865432 112222223222222221
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....++.+++.+||++||++|||++|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122346788999999999999999999975
No 23
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.9e-50 Score=444.75 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=204.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|+. .+|+.||||++.+.... ....+.+.+|++++++++|||||++++++.+++.+|+|
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS--SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC--HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 6899999999999999999954 57999999999765432 23467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++||+|.+++.... ...+++.+++.++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 99999999999997543 23578899999999999999999999 999999999999999999999999999997653
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.....+..+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+.....+..+ ..
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-----~~~~~i~~~~~~~~~---~~- 248 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-----NLVLKIISGSFPPVS---LH- 248 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHTCCCCCC---TT-
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHHHHcCCCCCCC---cc-
Confidence 323335578999999999999999999999999999999999999998754321 112222221111111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...++.++|.+||++||++|||++|+++
T Consensus 249 --~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 249 --YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1235778999999999999999999975
No 24
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-49 Score=433.65 Aligned_cols=256 Identities=24% Similarity=0.352 Sum_probs=201.0
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|.+.++||+|+||+||+|++. ..||||+++.... .....+.|.+|+.++++++|||||+++|++.+ +.+++||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 56788999999999999999874 3699999875432 23456789999999999999999999998865 5689999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++|+|.+++.... ..+++.++..|+.|||+||+|||++ +||||||||+|||+++++++||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999997543 3589999999999999999999999 9999999999999999999999999999876432
Q ss_pred C--CCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 919 S--SNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 919 ~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
. .......||+.|||||++.+ +.|+.++|||||||++|||+||+.||....... .....+.. ....+..+..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~--~~~~p~~~~~ 262 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGR--GYASPDLSKL 262 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHT--TCCCCCSTTS
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhc--CCCCCCcccc
Confidence 2 22345689999999999864 358999999999999999999999987554321 11111111 1112222211
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. +....+.+++.+||+.||++|||++||++.|+
T Consensus 263 ~~---~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 263 YK---NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CT---TSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred cc---cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 11 12236778899999999999999999998876
No 25
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.7e-50 Score=480.98 Aligned_cols=458 Identities=21% Similarity=0.216 Sum_probs=304.1
Q ss_pred cEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccc
Q 043316 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNN 207 (1031)
Q Consensus 128 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n 207 (1031)
++||+++|+++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57899999988 6787776 78888888888888766678888888888888888888777888888888888888888
Q ss_pred ccccccCccccccccccccccccccccc-ccCccccccCcccEEEeecCcCCCCCCccccccccc--cccccccccc--c
Q 043316 208 SLFGSIPNVMGNLNSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSL--FELDLSENQL--F 282 (1031)
Q Consensus 208 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~ 282 (1031)
+++ .+|.. .+++|++|+|++|++++ .+|..++++++|++|++++|.+++ ..+..+++| ++|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 887 56665 78888888888888886 467888888888888888888875 356667777 8888888888 6
Q ss_pred ccCCcccccCC-CCCeeeeccCccCCCCCC-CCCChhhhhhhhccccc-------cCCCCcccccccccCceEEcccCCC
Q 043316 283 GSIPLSFSNLS-SLTLMSLFNNSLSGSIPP-TQGNLEALSELGLYINQ-------LDGVIPPSIGNLSSLRTLYLYDNGF 353 (1031)
Q Consensus 283 ~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~L~~N~l 353 (1031)
+..|..+..+. +...+++++|++.+.++. .+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 77777776665 344567777777665543 55667777777777776 555554 566667777777766666
Q ss_pred cCccCCccC---cccccceEEccccccCCCccccc-----cCCCCCceEeccCcccCCcCchhccCCccccceecccccc
Q 043316 354 YGLVPNEIG---YLKSLSKLELCRNHLSGVIPHSI-----GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNL 425 (1031)
Q Consensus 354 ~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 425 (1031)
++..+..+. ..++|++|++++|++++.+|..+ +.+++|+.+++++|.+ ......+..+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~------------- 298 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEI------------- 298 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHH-------------
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcc-------------
Confidence 543222111 12356666666666665555555 4455555555555444 2111222211
Q ss_pred ccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhh
Q 043316 426 FGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQF 505 (1031)
Q Consensus 426 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 505 (1031)
....+|+.|++++|.+..... +..+++|++|++++|++++..|..+
T Consensus 299 --------~~~~~L~~L~l~~n~l~~~~~--------------------------~~~l~~L~~L~Ls~n~l~~~~~~~~ 344 (520)
T 2z7x_B 299 --------FSNMNIKNFTVSGTRMVHMLC--------------------------PSKISPFLHLDFSNNLLTDTVFENC 344 (520)
T ss_dssp --------HHTCCCSEEEEESSCCCCCCC--------------------------CSSCCCCCEEECCSSCCCTTTTTTC
T ss_pred --------cccCceeEEEcCCCccccccc--------------------------hhhCCcccEEEeECCccChhhhhhh
Confidence 001345556666555432210 1234455555555555555555555
Q ss_pred hccccCceeecccccccC--CCcccccccCccceeecCcCcCCCCCcc-cccCCCccceecccCcccCCCCchhhccccc
Q 043316 506 EKLFSLNKLILNLNQLSG--GVPLEFGSLTELQYLDLSANKLSSSIPK-SMGNLSKLHYLNLSNNQFNHKIPTEFEKLIH 582 (1031)
Q Consensus 506 ~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 582 (1031)
..+++|+.|++++|++++ .+|..+..+++|++|++++|++++.+|. .+..+++|++|+|++|++++..|..+. ++
T Consensus 345 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~ 422 (520)
T 2z7x_B 345 GHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PR 422 (520)
T ss_dssp CCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TT
T ss_pred ccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--cc
Confidence 555555555555555554 3345566666666666666666653443 366666777777777777655555543 57
Q ss_pred cCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 583 LSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 583 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+++.+..|..+++|++|++++|+++|..+
T Consensus 423 L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 423 IKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 777777777777 667666677778888888888776644457778888888888888877543
No 26
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-49 Score=473.71 Aligned_cols=451 Identities=21% Similarity=0.219 Sum_probs=368.6
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1031)
++||+++|+++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 58999999999 7998887 89999999999999888889999999999999999999888999999999999999999
Q ss_pred ccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCcc--cEEEeecCcC--C
Q 043316 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL--GILYLYKNSL--F 258 (1031)
Q Consensus 184 ~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~ 258 (1031)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| +.|++++|.+ +
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 78887 89999999999999997 578999999999999999999986 457778888 9999999999 8
Q ss_pred CCCCccccccc-cccccccccccccccCCc-ccccCCCCCeeeeccCc-------cCCCCCCCCCChhhhhhhhcccccc
Q 043316 259 GFIPSVIGNLK-SLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNNS-------LSGSIPPTQGNLEALSELGLYINQL 329 (1031)
Q Consensus 259 ~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~L~~N~l 329 (1031)
+..|..+..+. +...+++++|++.+.++. .+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88898888876 455678999998877665 78899999999999998 766666 788999999999999998
Q ss_pred CCCCccccc---ccccCceEEcccCCCcCccCCcc-----CcccccceEEccccccCCCcc-ccccCC---CCCceEecc
Q 043316 330 DGVIPPSIG---NLSSLRTLYLYDNGFYGLVPNEI-----GYLKSLSKLELCRNHLSGVIP-HSIGNL---TKLVLVNMC 397 (1031)
Q Consensus 330 ~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~l~ 397 (1031)
.+..+..+. .+++|++|++++|++++.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 875433322 24689999999999999999988 9999999999999999 445 555554 668888887
Q ss_pred CcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCC
Q 043316 398 ENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSI 477 (1031)
Q Consensus 398 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~ 477 (1031)
+|.+.... .+..+++|++|++++|+++ +.+
T Consensus 311 ~n~l~~~~--------------------------~~~~l~~L~~L~Ls~n~l~------------------------~~~ 340 (520)
T 2z7x_B 311 GTRMVHML--------------------------CPSKISPFLHLDFSNNLLT------------------------DTV 340 (520)
T ss_dssp SSCCCCCC--------------------------CCSSCCCCCEEECCSSCCC------------------------TTT
T ss_pred CCcccccc--------------------------chhhCCcccEEEeECCccC------------------------hhh
Confidence 77765431 0134456666666665443 344
Q ss_pred CCCccCCCCCcEEEeeCCcccC--CChhhhhccccCceeecccccccCCCcc-cccccCccceeecCcCcCCCCCccccc
Q 043316 478 PPEIGDSSKLQVLDLSSNHIVG--KIPVQFEKLFSLNKLILNLNQLSGGVPL-EFGSLTELQYLDLSANKLSSSIPKSMG 554 (1031)
Q Consensus 478 p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 554 (1031)
|..++.+++|++|+|++|++++ .+|..+..+++|+.|++++|++++.+|. .+..+++|++|++++|++++..|..+.
T Consensus 341 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 420 (520)
T 2z7x_B 341 FENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP 420 (520)
T ss_dssp TTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC
T ss_pred hhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc
Confidence 5566667777777777777775 3456677788888888888888764554 477788888888888888777766654
Q ss_pred CCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcc-ccCcccchhhhcCCCccCCC
Q 043316 555 NLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ-ICNMESLEELNLSHNNLFDL 620 (1031)
Q Consensus 555 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~ 620 (1031)
++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+++|++|++++|++++.
T Consensus 421 --~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 421 --PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp --TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred --ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCccc
Confidence 68888888888887 56666668888888888888888 45554 88888888888888888764
No 27
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.3e-48 Score=477.91 Aligned_cols=511 Identities=22% Similarity=0.222 Sum_probs=372.6
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|||++|+|++..|.+|.++++|++|||++|+|++..|..|++|++|++|+|++|++++..|..|+++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 37999999999999777778999999999999999999777778999999999999999999655567899999999999
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCccc----EEEeecC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG----ILYLYKN 255 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~N 255 (1031)
++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|+|++|++++..|..+..+.+++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999997666789999999999999999975 4688899999999999999999988888888776654 6889999
Q ss_pred cCCCCCCcccccccccccccccccccccc-CCcccccCCCCCeeeeccCccCC------CCCCCCCChhhhhhhhccccc
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFGS-IPLSFSNLSSLTLMSLFNNSLSG------SIPPTQGNLEALSELGLYINQ 328 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~~L~~L~L~~N~ 328 (1031)
.++...+..+. ...++.|++++|..... .+..+..+..++...+..+.... ..+..+..+..+...++..+.
T Consensus 212 ~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 99876655544 45678899998876543 34467778888877776544322 222333333344433333332
Q ss_pred cCC---CCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcC
Q 043316 329 LDG---VIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLI 405 (1031)
Q Consensus 329 l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 405 (1031)
... .++..+..+.+++.+.+.+|.+.... .+....+|+.|++.+|.+. ...
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~------------------------~~~ 344 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFG------------------------QFP 344 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEES------------------------SCC
T ss_pred hcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhccccccc------------------------CcC
Confidence 221 11222334444555555555443321 2333444555555555444 332
Q ss_pred chhccCCccccceeccccccccccccccCCCCCCCeeccccccccCc--ccccccCCCccccccCcccccCCCCCCCccC
Q 043316 406 PKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE--ISFNWRNFPKLGTFNASMNNIYGSIPPEIGD 483 (1031)
Q Consensus 406 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~ 483 (1031)
+. .+..|+.+++.+|.+.... .+..+++|+.|++++|.+... ....+.....|+.+++..|.+.. .+..+..
T Consensus 345 ~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~ 418 (635)
T 4g8a_A 345 TL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLG 418 (635)
T ss_dssp CC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTT
T ss_pred cc---cchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccc
Confidence 21 2333444444444433221 223445555555555555432 22233445556666666665543 3455777
Q ss_pred CCCCcEEEeeCCcccCCCh-hhhhccccCceeecccccccCCCcccccccCccceeecCcCcC-CCCCcccccCCCccce
Q 043316 484 SSKLQVLDLSSNHIVGKIP-VQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL-SSSIPKSMGNLSKLHY 561 (1031)
Q Consensus 484 l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~ 561 (1031)
+++|+.++++.|......+ ..|..+.+++.++++.|++++..+..+..+++|+.|+|++|.+ .+..|..|..+++|++
T Consensus 419 l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~ 498 (635)
T 4g8a_A 419 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498 (635)
T ss_dssp CTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCE
Confidence 8888888888887765543 5677888899999999998888888888899999999998874 4457788889999999
Q ss_pred ecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccC-CcceEEeccccc
Q 043316 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEM-RSLSRIDIAYNE 640 (1031)
Q Consensus 562 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~ 640 (1031)
|+|++|+|++.+|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.|..|..+ ++|++|++++|+
T Consensus 499 L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np 578 (635)
T 4g8a_A 499 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 578 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCC
T ss_pred EECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCC
Confidence 9999999998889999999999999999999998888889999999999999999999999999887 689999999999
Q ss_pred ccCC
Q 043316 641 LQGP 644 (1031)
Q Consensus 641 l~~~ 644 (1031)
|+|.
T Consensus 579 ~~C~ 582 (635)
T 4g8a_A 579 FACT 582 (635)
T ss_dssp BCCS
T ss_pred Cccc
Confidence 9874
No 28
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2e-49 Score=430.65 Aligned_cols=248 Identities=21% Similarity=0.321 Sum_probs=209.2
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|+ ..+++.||||++.+..... ....+.+.+|++++++++|||||++++++++++.+|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 679999999999999999995 4679999999998755322 34577899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++||+|.++++... .+++.++..++.||+.||+|||++ +||||||||+|||++.++++||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999998643 589999999999999999999999 999999999999999999999999999998754
Q ss_pred CC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ......+... ...++..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~----~~~~p~~-- 256 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIKL----EYDFPEK-- 256 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT----CCCCCTT--
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcC----CCCCCcc--
Confidence 32 234567899999999999999999999999999999999999999865432 1222222111 1122221
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKV 1025 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 1025 (1031)
...++.++|.+||++||++|||++|+
T Consensus 257 ----~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 257 ----FFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp ----CCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred ----cCHHHHHHHHHHccCCHhHCcChHHH
Confidence 12357789999999999999999986
No 29
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.4e-49 Score=445.31 Aligned_cols=249 Identities=26% Similarity=0.383 Sum_probs=210.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|+..++||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++|||||+++++|.+++.+|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT----CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 4699999999999999999955 579999999997543 23456688999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
||||+||+|.++++.. .+++.++..++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 9999999999999753 489999999999999999999999 999999999999999999999999999998766
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+............
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i~~~~~~~~~~~~--- 371 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKMIRDNLPPRLKNLH--- 371 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSCCCCCSCTT---
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHcCCCCCCcccc---
Confidence 55566778999999999999999999999999999999999999999864432 1122222232222222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++.+++.+||+.||++|||++|+++
T Consensus 372 -~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 -KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp -SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11236778999999999999999999975
No 30
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-48 Score=418.23 Aligned_cols=249 Identities=23% Similarity=0.312 Sum_probs=191.5
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||++.+....+ ....+.+.+|++++++++|||||++++++.+++..|+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 47899999999999999999965 579999999997654322 3446789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+ +|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.++++||+|||+|+...
T Consensus 91 vmEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EEeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 99999 679999987653 589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. ......+||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ......+. .. ...++..
T Consensus 164 ~~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--~~~~~~i~---~~-~~~~p~~-- 234 (275)
T 3hyh_A 164 DG-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNIS---NG-VYTLPKF-- 234 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH---HT-CCCCCTT--
T ss_pred CC-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH---cC-CCCCCCC--
Confidence 32 33456789999999999998776 5799999999999999999999865432 22222221 11 1122211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ..++.+++.+||+.||++|||++|+++
T Consensus 235 -~---s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 235 -L---SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -S---CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -C---CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1 235678999999999999999999986
No 31
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-48 Score=421.98 Aligned_cols=245 Identities=22% Similarity=0.339 Sum_probs=198.3
Q ss_pred CccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----CCeeEE
Q 043316 762 GEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----AQHSFI 836 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~~~l 836 (1031)
...++||+|+||+||+|.. .+++.||||++...... ....+.|.+|++++++++|||||++++++.+ +..+|+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 5567899999999999954 57899999999765432 2346789999999999999999999999865 356899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCC-CCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDS-EHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~ 913 (1031)
||||+++|+|.++++.. ..+++..+..++.||+.||+|||++ + ||||||||+|||++. ++.+||+|||+|+
T Consensus 107 vmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999999764 3589999999999999999999998 6 999999999999984 7999999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC-CCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH-RLPT 992 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 992 (1031)
... .......+||+.|||||++.+ .|+.++||||+||++|||+||+.||....... .....+.....+ .++.
T Consensus 181 ~~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~----~~~~~i~~~~~~~~~~~ 253 (290)
T 3fpq_A 181 LKR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA----QIYRRVTSGVKPASFDK 253 (290)
T ss_dssp GCC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH----HHHHHHTTTCCCGGGGG
T ss_pred eCC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH----HHHHHHHcCCCCCCCCc
Confidence 643 234466789999999999875 69999999999999999999999986543321 111111111111 1111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....++.+++.+||++||++|||++|+++
T Consensus 254 ------~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 254 ------VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11235778999999999999999999986
No 32
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.1e-49 Score=434.63 Aligned_cols=249 Identities=23% Similarity=0.302 Sum_probs=202.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.+.|+..++||+|+||+||+|+. .+|+.||||+++.... ..+|+.++++++|||||++++++.+++.+|+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35688899999999999999965 5799999999976432 1379999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~ 915 (1031)
||||++||+|.++++... .+++.++..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+.+
T Consensus 128 vmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp EECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 999999999999997643 589999999999999999999999 999999999999999998 6999999999977
Q ss_pred CCCCCC-----ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 916 NPHSSN-----WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 916 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
...... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||....... ....+....... ..+
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i~~~~~~~-~~~ 278 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--LCLKIASEPPPI-REI 278 (336)
T ss_dssp ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--CHHHHHHSCCGG-GGS
T ss_pred cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHcCCCCc-hhc
Confidence 543221 123579999999999999999999999999999999999999987544321 111111110000 111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
++ .....+.+++.+||++||++|||+.|+++.|.
T Consensus 279 ~~------~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 279 PP------SCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp CT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc------cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 11 11235778899999999999999999998764
No 33
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-48 Score=425.11 Aligned_cols=249 Identities=24% Similarity=0.318 Sum_probs=198.6
Q ss_pred hccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++++..... .....+.+|++++++++|||||++++++++++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 5799999999999999999964 257899999997654322 2344688999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||++||+|.++++... .+++.++..++.||+.||+|||++ ||+||||||+|||++.+|++||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999998643 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
...........+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .... ..+... ...++..
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~---~~i~~~-~~~~p~~- 248 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETM---TMILKA-KLGMPQF- 248 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT-
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHH---HHHHcC-CCCCCCc-
Confidence 65444455667899999999999999999999999999999999999999875433 1111 122111 1122211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTM-----KKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~ 1027 (1031)
...++.+++.+||++||++|||+ +|+++
T Consensus 249 -----~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 -----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -----SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -----CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 12357789999999999999984 56653
No 34
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.9e-48 Score=423.36 Aligned_cols=262 Identities=23% Similarity=0.307 Sum_probs=199.5
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----ee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----HS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----~~ 834 (1031)
++|...++||+|+||+||+|++ +|+.||||+++... .....+.+|+..+.+++|||||+++|++.+++ .+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 4678889999999999999987 78999999986542 11223345666677899999999999997653 57
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC-----CCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD-----CLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
|+||||+++|+|.++++.. .+++.++.+++.|+++||+|||++ +.++||||||||+|||++.++++||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999999754 489999999999999999999976 2458999999999999999999999999
Q ss_pred ccccccCCCCCC----ceeeccccCcccccccccc------CCCccccchhhhHHHHHHHhCCCCCCCcCccchh-----
Q 043316 910 GIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMM------RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS----- 974 (1031)
Q Consensus 910 g~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~----- 974 (1031)
|+|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||+.||.........
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 999876543321 2345799999999998754 4678999999999999999998876533321111
Q ss_pred -----hhhhHHHh-hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 975 -----FSNMITEI-NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 975 -----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
........ ....++.++... ...+....+.+++.+||+.||++||||+||++.|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~rp~~p~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 233 PSDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred cccchHHHHHHHHhcccCCCCCCccc-cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 11111111 112222222211 112345578899999999999999999999999863
No 35
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6e-48 Score=430.26 Aligned_cols=257 Identities=22% Similarity=0.349 Sum_probs=208.6
Q ss_pred HhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC-CceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~~~~~~ 830 (1031)
.++|++.+.||+|+||+||+|.+. .++.||||+++.... ....+.|.+|++++.+++| ||||+++|+|.+
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~---~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC---hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 478999999999999999999643 246899999976542 2346789999999999975 899999999966
Q ss_pred -CCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 831 -AQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 831 -~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
++.+++|||||++|+|.++++.... ...+++.++..++.|||+||+|||++ +||||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccce
Confidence 4678999999999999999975422 23489999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
|+++++.+||+|||+|+........ .....||+.|||||++.++.|+.++|||||||++|||+| |+.||.......
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~- 295 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 295 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-
Confidence 9999999999999999976543332 234678999999999999999999999999999999998 999987654321
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+.. .+........+... ..++.+++.+||+.||++|||++||++.|+
T Consensus 296 ~~~~---~i~~g~~~~~p~~~------~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 296 EFCR---RLKEGTRMRAPDYT------TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp HHHH---HHHHTCCCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHH---HHHcCCCCCCCccC------CHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1112 22222222222211 235778899999999999999999999886
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5e-47 Score=414.58 Aligned_cols=251 Identities=20% Similarity=0.358 Sum_probs=194.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ---- 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~---- 832 (1031)
..+|++.+.||+|+||+||+|+. .+++.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~ 80 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEK 80 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccc
Confidence 46799999999999999999965 579999999996543 2234578999999999999999999999986543
Q ss_pred --------eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 833 --------HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 833 --------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
..|+||||+++|+|.++++......+.++..++.++.||+.||+|||++ |||||||||+|||++.++.+
T Consensus 81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 4799999999999999998776555667788999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC------------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc
Q 043316 905 HVSDFGIAKFLNPHSS------------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF 972 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~ 972 (1031)
||+|||+|+....... ..+..+||+.|||||++.+..|+.++||||+||++|||++ ||.....
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~-- 232 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-- 232 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH--
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH--
Confidence 9999999987654321 1234579999999999999999999999999999999996 7642211
Q ss_pred hhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 973 SSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ .....+ ....+......+++.+||++||++|||+.|+++
T Consensus 233 --~~~~~~~~---~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 --RVRTLTDV---RNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp --HHHHHHHH---HTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHH---hcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111 112222 223333445678999999999999999999986
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8e-47 Score=455.96 Aligned_cols=461 Identities=21% Similarity=0.235 Sum_probs=234.8
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1031)
+++|+++|+++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 34455555554 2444433 45555555555555444445555555555555555555444555555555555555555
Q ss_pred ccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCcc--cEEEeecCcC--C
Q 043316 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNL--GILYLYKNSL--F 258 (1031)
Q Consensus 184 ~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~ 258 (1031)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| +.|++++|.+ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 555 44444 45555555555555553 2344555555555555555555432 23333333 5555555555 5
Q ss_pred CCCCccccccc--cccccccccccccccCCc-ccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcc
Q 043316 259 GFIPSVIGNLK--SLFELDLSENQLFGSIPL-SFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPP 335 (1031)
Q Consensus 259 ~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 335 (1031)
+..|..+..+. .| .+++++|.+.+.++. .+..+++|+.|++++|+.. +.. +.+ .+.
T Consensus 185 ~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~---------~~~----------l~~-~~~ 243 (562)
T 3a79_B 185 GGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDEN---------CQR----------LMT-FLS 243 (562)
T ss_dssp SSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTT---------HHH----------HHH-HHH
T ss_pred ccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccc---------cch----------HHH-HHH
Confidence 55555554433 22 335555555444333 3344555555555554311 000 111 112
Q ss_pred cccccccCceEEcccCCCcCcc----CCccCcccccceEEccccccCCCccccc-----cCCCCCceEeccCcccCCcCc
Q 043316 336 SIGNLSSLRTLYLYDNGFYGLV----PNEIGYLKSLSKLELCRNHLSGVIPHSI-----GNLTKLVLVNMCENHLFGLIP 406 (1031)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~~ 406 (1031)
.+..+++|+.|+++++.+.+.. +..+ ..++|++|++++|++++.+|..+ ..++.|+.++++.|.+ ....
T Consensus 244 ~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~ 321 (562)
T 3a79_B 244 ELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSK 321 (562)
T ss_dssp HHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCH
T ss_pred HHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecCh
Confidence 3444555555555555443211 1111 12356666666666655555544 3444444444444443 1111
Q ss_pred hhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCC
Q 043316 407 KSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK 486 (1031)
Q Consensus 407 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~ 486 (1031)
..+..+ ....+|+.|++++|.+..... ...+++
T Consensus 322 ~~~~~~---------------------~~~~~L~~L~l~~n~~~~~~~--------------------------~~~l~~ 354 (562)
T 3a79_B 322 EALYSV---------------------FAEMNIKMLSISDTPFIHMVC--------------------------PPSPSS 354 (562)
T ss_dssp HHHHHH---------------------HHTCCCSEEEEESSCCCCCCC--------------------------CSSCCC
T ss_pred hhhhhh---------------------hccCcceEEEccCCCcccccC--------------------------ccCCCC
Confidence 111111 001345555555555432110 123444
Q ss_pred CcEEEeeCCcccCCChhhhhccccCceeecccccccCC--CcccccccCccceeecCcCcCCCCCc-ccccCCCccceec
Q 043316 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGG--VPLEFGSLTELQYLDLSANKLSSSIP-KSMGNLSKLHYLN 563 (1031)
Q Consensus 487 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ 563 (1031)
|++|++++|++++..|..+.++++|+.|++++|++++. +|..|..+++|++|++++|++++.+| ..+..+++|++|+
T Consensus 355 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~ 434 (562)
T 3a79_B 355 FTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLN 434 (562)
T ss_dssp CCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEE
T ss_pred ceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEE
Confidence 55555555555544555555555555555555555532 23445566666666666666665233 3355666666666
Q ss_pred ccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccC
Q 043316 564 LSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 564 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+++.+..|..+++|+.|++++|+++|
T Consensus 435 l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 435 LSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp CCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCC
Confidence 666666554444433 46777777777776 566666677777777777777776544447777777777777777777
Q ss_pred CCC
Q 043316 644 PIP 646 (1031)
Q Consensus 644 ~~p 646 (1031)
..|
T Consensus 512 ~c~ 514 (562)
T 3a79_B 512 TCP 514 (562)
T ss_dssp CHH
T ss_pred Ccc
Confidence 554
No 38
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.3e-45 Score=451.09 Aligned_cols=536 Identities=25% Similarity=0.220 Sum_probs=407.6
Q ss_pred ccCCCCC-CCCCCCCCCCCccc----eeEeCCC----------CCEEEEEecCCccccccCCccccCCCcccEEecCCCc
Q 043316 48 LLSSWTL-YPANATKISPCTWF----GIFCNLV----------GRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNV 112 (1031)
Q Consensus 48 ~~~sw~~-~~~~~~~~~~C~w~----gv~c~~~----------~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~ 112 (1031)
.+++|.. .|. .-++|.|. -|.|... ..++.|||+++.+++ +++.+|.++++|++|||++|+
T Consensus 12 ~~~~~~~~~p~---~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 12 KLAAANSSIPE---SWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp ----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCC
T ss_pred hhhcccCCCCC---CCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCc
Confidence 4677752 221 12467553 4678642 258999999999985 666679999999999999999
Q ss_pred CcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCC-CCCC
Q 043316 113 LYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSG-RIPP 191 (1031)
Q Consensus 113 ~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~ip~ 191 (1031)
|++..|..|.+|++|++|+|++|+|++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|.
T Consensus 88 i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~ 167 (635)
T 4g8a_A 88 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 167 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCch
Confidence 997777789999999999999999997666789999999999999999996666679999999999999999975 4688
Q ss_pred cccccccccEEEecccccccccCcccccccccc----cccccccccccccCccccccCcccEEEeecCcCCCC-CCcccc
Q 043316 192 SLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLS----ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF-IPSVIG 266 (1031)
Q Consensus 192 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~ 266 (1031)
.++++++|++|++++|++++..|..|..+.+++ .++++.|.++. ++........++.+++.+|..... .+..+.
T Consensus 168 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~-i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~ 246 (635)
T 4g8a_A 168 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQ 246 (635)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE-ECTTTTTTCEEEEEEEESCCSSHHHHHHHHH
T ss_pred hhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccc-cCcccccchhhhhhhhhcccccccccchhhc
Confidence 999999999999999999988888888887765 57899999985 444444556788899999876532 344566
Q ss_pred ccccccccccccccc------cccCCcccccCCCCCeeeeccCccCC---CCCCCCCChhhhhhhhccccccCCCCcccc
Q 043316 267 NLKSLFELDLSENQL------FGSIPLSFSNLSSLTLMSLFNNSLSG---SIPPTQGNLEALSELGLYINQLDGVIPPSI 337 (1031)
Q Consensus 267 ~l~~L~~L~Ls~N~l------~~~~p~~~~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 337 (1031)
.+..++...+..+.. ....+..+..+..+...++..+.... .++..+..+.+++.+++..|.+.... .+
T Consensus 247 ~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~ 324 (635)
T 4g8a_A 247 GLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DF 324 (635)
T ss_dssp TTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GG
T ss_pred CCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--cc
Confidence 777777766654433 22334456666777777776655432 23456667788888999988887542 36
Q ss_pred cccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCC--cCchhccCCccc
Q 043316 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFG--LIPKSFRNLTSL 415 (1031)
Q Consensus 338 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L 415 (1031)
.....|+.|++.+|.+.+..+ ..+..|+.+++.+|.+... .....+++|+.++++.|.+.. ..+..+..+.+|
T Consensus 325 ~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L 399 (635)
T 4g8a_A 325 SYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISL 399 (635)
T ss_dssp GSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCC
T ss_pred ccchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhh
Confidence 667899999999999976644 3567788999999987643 345578899999999998754 345566777788
Q ss_pred cceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCC
Q 043316 416 ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495 (1031)
Q Consensus 416 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N 495 (1031)
+.+++..|.+.... ..+..+++|+.+++++|+.... ..+..+..+++++.++++.|
T Consensus 400 ~~L~~~~~~~~~~~-~~~~~l~~L~~l~l~~~~~~~~-----------------------~~~~~~~~l~~l~~l~ls~n 455 (635)
T 4g8a_A 400 KYLDLSFNGVITMS-SNFLGLEQLEHLDFQHSNLKQM-----------------------SEFSVFLSLRNLIYLDISHT 455 (635)
T ss_dssp CEEECCSCSEEEEC-SCCTTCTTCCEEECTTSEEEST-----------------------TSSCTTTTCTTCCEEECTTS
T ss_pred hhhhcccccccccc-ccccccccccchhhhhcccccc-----------------------cccccccccccccccccccc
Confidence 88888877765443 3466677777777777655432 12234566777888888888
Q ss_pred cccCCChhhhhccccCceeeccccccc-CCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCc
Q 043316 496 HIVGKIPVQFEKLFSLNKLILNLNQLS-GGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIP 574 (1031)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 574 (1031)
.+.+..+..+..+++|+.|++++|++. +..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|
T Consensus 456 ~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~ 535 (635)
T 4g8a_A 456 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 535 (635)
T ss_dssp CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCC
T ss_pred ccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCCh
Confidence 888777777888888888888887643 4567778888888888888888888778888888888888888888888888
Q ss_pred hhhccccccCceeccCcccCCcCCccccCc-ccchhhhcCCCccCC
Q 043316 575 TEFEKLIHLSELDLSHNFLQGEIPPQICNM-ESLEELNLSHNNLFD 619 (1031)
Q Consensus 575 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~ 619 (1031)
..|..+++|+.|||++|+|++..|..+..+ ++|++|+|++|++..
T Consensus 536 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 536 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp GGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred hHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 888888888888888888888888888877 578888888888875
No 39
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.1e-45 Score=410.64 Aligned_cols=295 Identities=34% Similarity=0.528 Sum_probs=265.2
Q ss_pred CCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCCc--cceeEeCCC---CCEEEEEecCCcccc--ccCCc
Q 043316 23 SDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCT--WFGIFCNLV---GRVISISLSSLGLNG--TFQDF 95 (1031)
Q Consensus 23 ~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C~--w~gv~c~~~---~~v~~l~l~~~~l~g--~~~~~ 95 (1031)
.|.++|++||++||+++. +|. .+++|. .++|||. |.||+|+.. ++|+.|+|+++++.| .+|+.
T Consensus 2 ~c~~~~~~aL~~~k~~~~--~~~--~l~~W~------~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~ 71 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG--NPT--TLSSWL------PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSS 71 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT--CCG--GGTTCC------TTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGG
T ss_pred CCCHHHHHHHHHHHHhcC--Ccc--cccCCC------CCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChh
Confidence 699999999999999997 552 689997 5679998 999999864 799999999999998 77764
Q ss_pred cccCCCcccEEecCC-CcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCccc
Q 043316 96 SFSSFPHLMYLNLSC-NVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSL 174 (1031)
Q Consensus 96 ~~~~l~~l~~L~l~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 174 (1031)
|+++++|++|++++ |.+.+.+|..++++++|++|+|++|++++.+|..++++++|++|++++|++++.+|..++.+++
T Consensus 72 -l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 72 -LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp -GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred -HhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 89999999999995 9999999999999999999999999999899999999999999999999999999999999999
Q ss_pred CceeeccCcccCCCCCCcccccc-cccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 175 INVLTLCHNNFSGRIPPSLGNLS-NLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
|++|+|++|.++|.+|..+++++ +|++|++++|++++.+|..++.++ |++|+|++|++++.+|..+..+++|+.|+|+
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 229 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECC
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECC
Confidence 99999999999999999999998 999999999999989999999887 9999999999998889899999999999999
Q ss_pred cCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccc-cCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ-LDG 331 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~ 331 (1031)
+|.+++.+|. +..+++|++|+|++|++++.+|..|..+++|++|+|++|+++|.+|.. +++++|+.|++++|+ +.|
T Consensus 230 ~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 230 KNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp SSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred CCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 9999877665 788899999999999999889999999999999999999999888876 788888888888887 554
No 40
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.8e-45 Score=441.34 Aligned_cols=453 Identities=22% Similarity=0.223 Sum_probs=312.2
Q ss_pred EEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeec
Q 043316 79 ISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDV 158 (1031)
Q Consensus 79 ~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 158 (1031)
..++++++++++ +|.. +. ++|++|+|++|.+++..|..++++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~-~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKD-LP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTT-SC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCC-CC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 678899999986 6754 32 8999999999999988888999999999999999999988899999999999999999
Q ss_pred cccCCCCCccccCcccCceeeccCcccCC-CCCCcccccccccEEEecccccccccCccccccccc--cccccccccc--
Q 043316 159 NHLHGSIPLEIGKLSLINVLTLCHNNFSG-RIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSL--SILDLSQNQL-- 233 (1031)
Q Consensus 159 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l-- 233 (1031)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++. .++.+++| ++|+|++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9999 78887 89999999999999996 4578999999999999999999853 45666666 9999999999
Q ss_pred ccccCccccccC--cccEEEeecCcCCCCCCc-ccccccccccccccccc-----ccccCCcccccCCCCCeeeeccCcc
Q 043316 234 RGSIPFSLANLS--NLGILYLYKNSLFGFIPS-VIGNLKSLFELDLSENQ-----LFGSIPLSFSNLSSLTLMSLFNNSL 305 (1031)
Q Consensus 234 ~~~~p~~l~~l~--~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-----l~~~~p~~~~~l~~L~~L~L~~N~l 305 (1031)
++..|..+..++ .| .++++.|.+.+.++. .+.++++|+.|++++|+ +.+. ...+..+++|+.|++.++.+
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEE
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcC
Confidence 888999888865 34 568899998876654 56789999999999985 3322 23678889999999988876
Q ss_pred CCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCcc-----CcccccceEEccccccCCC
Q 043316 306 SGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEI-----GYLKSLSKLELCRNHLSGV 380 (1031)
Q Consensus 306 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~ 380 (1031)
++ |.+.+. +..+ ..++|++|++++|.+++.+|..+ ..++.|+.++++.|.+ .
T Consensus 262 ~~-------------------~~~~~~-~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~ 318 (562)
T 3a79_B 262 TW-------------------KCSVKL-FQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--L 318 (562)
T ss_dssp CH-------------------HHHHHH-HHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--S
T ss_pred cH-------------------HHHHHH-HHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--e
Confidence 53 222211 1111 12467777777777776666665 6666666666666666 2
Q ss_pred cc-ccccCC---CCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCccccc
Q 043316 381 IP-HSIGNL---TKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFN 456 (1031)
Q Consensus 381 ~p-~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 456 (1031)
+| ..+..+ .+|+.|++++|.+.... + +..+++|++|++++|+++
T Consensus 319 ~p~~~~~~~~~~~~L~~L~l~~n~~~~~~---~-----------------------~~~l~~L~~L~l~~n~l~------ 366 (562)
T 3a79_B 319 FSKEALYSVFAEMNIKMLSISDTPFIHMV---C-----------------------PPSPSSFTFLNFTQNVFT------ 366 (562)
T ss_dssp SCHHHHHHHHHTCCCSEEEEESSCCCCCC---C-----------------------CSSCCCCCEEECCSSCCC------
T ss_pred cChhhhhhhhccCcceEEEccCCCccccc---C-----------------------ccCCCCceEEECCCCccc------
Confidence 33 222222 45666666666553221 1 123445555555554433
Q ss_pred ccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCC--hhhhhccccCceeecccccccCCCc-ccccccC
Q 043316 457 WRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI--PVQFEKLFSLNKLILNLNQLSGGVP-LEFGSLT 533 (1031)
Q Consensus 457 ~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 533 (1031)
+.+|..++.+++|++|+|++|++++.. |..|.++++|+.|++++|++++.+| ..+..++
T Consensus 367 ------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~ 428 (562)
T 3a79_B 367 ------------------DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAE 428 (562)
T ss_dssp ------------------TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCT
T ss_pred ------------------cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcc
Confidence 223344444555555555555555422 3445555555666666665555233 2355566
Q ss_pred ccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcc-ccCcccchhhhc
Q 043316 534 ELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ-ICNMESLEELNL 612 (1031)
Q Consensus 534 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L 612 (1031)
+|++|++++|++++..|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|+.|+|
T Consensus 429 ~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 429 SILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp TCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEEC
T ss_pred cCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEe
Confidence 666666666666555444443 46666666666665 34444446666666666666666 34443 666666677777
Q ss_pred CCCccCCC
Q 043316 613 SHNNLFDL 620 (1031)
Q Consensus 613 ~~N~l~~~ 620 (1031)
++|++.+.
T Consensus 505 ~~N~~~c~ 512 (562)
T 3a79_B 505 HDNPWDCT 512 (562)
T ss_dssp CSCCBCCC
T ss_pred cCCCcCCC
Confidence 77766653
No 41
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-44 Score=407.05 Aligned_cols=258 Identities=22% Similarity=0.296 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec------C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN------A 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------~ 831 (1031)
++|++.+.||+|+||+||+|.. .+|+.||||+++.... .....+.+.+|++++++++|||||++++++.. .
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 5799999999999999999954 6799999999976432 22346778999999999999999999998754 4
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
+.+|+||||++ |+|.+++.... .+++.++..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 67899999996 67999997653 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC----CCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh----
Q 043316 912 AKFLNPH----SSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI---- 982 (1031)
Q Consensus 912 a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~---- 982 (1031)
|+.+... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||...... .....+...
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~--~~l~~I~~~~g~p 282 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV--HQLQLIMMVLGTP 282 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH--HHHHHHHHHHCCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH--HHHHHHHHhcCCC
Confidence 9876432 2234567899999999998875 4699999999999999999999998754331 111111111
Q ss_pred ----------------hhhcCCCCCCCChhH-HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 ----------------NQNLDHRLPTPSRDV-MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ----------------~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+...+...... .....++.+++.+||+.||++|||++|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 011111111110000 011235778999999999999999999875
No 42
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.9e-44 Score=400.62 Aligned_cols=202 Identities=25% Similarity=0.314 Sum_probs=172.2
Q ss_pred HHHHHhccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeE
Q 043316 754 IIKAIDDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFC 828 (1031)
Q Consensus 754 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 828 (1031)
+.+..++|++.++||+|+||+||+|+. .+++.||||++.... ...++.+|+++++.+ +|||||++++++
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~ 89 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCF 89 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence 334457899999999999999999954 257899999986532 355688999999988 699999999999
Q ss_pred ecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEe
Q 043316 829 SNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVS 907 (1031)
Q Consensus 829 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~ 907 (1031)
.+.+.+|+||||+++|+|.++++ .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+||+
T Consensus 90 ~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~ 160 (361)
T 4f9c_A 90 RKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALV 160 (361)
T ss_dssp EETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEEC
T ss_pred EECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEEC
Confidence 99999999999999999999984 378899999999999999999999 99999999999999876 799999
Q ss_pred ccccccccCCCCC----------------------------CceeeccccCcccccccccc-CCCccccchhhhHHHHHH
Q 043316 908 DFGIAKFLNPHSS----------------------------NWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEV 958 (1031)
Q Consensus 908 Dfg~a~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el 958 (1031)
|||+|+....... ..+..+||+.|||||++.+. .++.++||||+||++|||
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~el 240 (361)
T 4f9c_A 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240 (361)
T ss_dssp CCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHH
Confidence 9999986543211 12345799999999999875 489999999999999999
Q ss_pred HhCCCCCCCcCc
Q 043316 959 IKGNHPRDYVST 970 (1031)
Q Consensus 959 ltG~~P~~~~~~ 970 (1031)
+||+.||....+
T Consensus 241 l~G~~Pf~~~~~ 252 (361)
T 4f9c_A 241 LSGRYPFYKASD 252 (361)
T ss_dssp HHTCSSSSCCSS
T ss_pred HHCCCCCCCCCC
Confidence 999999854443
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=8.9e-44 Score=414.85 Aligned_cols=424 Identities=25% Similarity=0.270 Sum_probs=224.3
Q ss_pred CCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 99 SFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
..++|++|++++|.+ |.+|++++++++|++|++++|.++|.+|.+++++++|+.+++..+.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 356777777777777 67777777777777777777777777777777777777776665542 456788
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
++++|++++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++ +|... ++|++|++++|+++
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~~---~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDLP---PLLEYLGVSNNQLE 144 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSCC---TTCCEEECCSSCCS
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCCC---CCCCEEECcCCCCC
Confidence 888888874 5552 3678888888888875 6653 3678888888888874 33221 57888888888887
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 338 (1031)
+ +| .|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++++|++++ +|...
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~- 214 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP- 214 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-
Confidence 6 55 47778888888888888774 55433 477777777777775 44 46777777777777777765 34322
Q ss_pred ccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccce
Q 043316 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418 (1031)
Q Consensus 339 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 418 (1031)
++|++|++++|.++ .+| .++.+++|++|++++|++++ +|.. +++|++|++++|++.++ |.. +++|++|
T Consensus 215 --~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l-~~~---~~~L~~L 282 (454)
T 1jl5_A 215 --LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDL-PEL---PQSLTFL 282 (454)
T ss_dssp --TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCC-CCC---CTTCCEE
T ss_pred --CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCccccc-Ccc---cCcCCEE
Confidence 46677777777766 344 36667777777777777664 2322 35666666666666553 211 2455555
Q ss_pred eccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCC-CCCcEEEeeCCcc
Q 043316 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS-SKLQVLDLSSNHI 497 (1031)
Q Consensus 419 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l-~~L~~L~Ls~N~l 497 (1031)
++++|++.++.. ..++|+.|++++|+++++ ..+ ++|++|++++|++
T Consensus 283 ~ls~N~l~~l~~----~~~~L~~L~l~~N~l~~i-----------------------------~~~~~~L~~L~Ls~N~l 329 (454)
T 1jl5_A 283 DVSENIFSGLSE----LPPNLYYLNASSNEIRSL-----------------------------CDLPPSLEELNVSNNKL 329 (454)
T ss_dssp ECCSSCCSEESC----CCTTCCEEECCSSCCSEE-----------------------------CCCCTTCCEEECCSSCC
T ss_pred ECcCCccCcccC----cCCcCCEEECcCCcCCcc-----------------------------cCCcCcCCEEECCCCcc
Confidence 555555544221 013445555555444321 112 4677777777777
Q ss_pred cCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCC--CCcccccCCCccceecccCcccCCCCch
Q 043316 498 VGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSS--SIPKSMGNLSKLHYLNLSNNQFNHKIPT 575 (1031)
Q Consensus 498 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 575 (1031)
++ +|.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|..+.. |+.|++.+.+|.
T Consensus 330 ~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~ 393 (454)
T 1jl5_A 330 IE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPE 393 (454)
T ss_dssp SC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------
T ss_pred cc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccccccccc
Confidence 75 4433 467777888888777 4554 36778888888888876 45554432 334666666665
Q ss_pred hhccccccCceeccCcccCC--cCCccccCcccchhhhcCCCccCCCCccccc
Q 043316 576 EFEKLIHLSELDLSHNFLQG--EIPPQICNMESLEELNLSHNNLFDLIPGCFE 626 (1031)
Q Consensus 576 ~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 626 (1031)
. +++|+.||+++|++++ .+|. +|+.|.+.+|.+.+..+....
T Consensus 394 ~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~~~~ 437 (454)
T 1jl5_A 394 L---PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPYEFAHE 437 (454)
T ss_dssp -----------------------------------------------------
T ss_pred c---cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCccccCHH
Confidence 3 4788999999999986 4553 466777888888876554443
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.3e-43 Score=410.05 Aligned_cols=420 Identities=24% Similarity=0.246 Sum_probs=213.8
Q ss_pred ccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccc
Q 043316 147 HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSIL 226 (1031)
Q Consensus 147 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 226 (1031)
+.++|++|++++|.+ |.+|.+|+++++|++|++++|.++|.+|.+++++++|+.+++.+|.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 457788888888888 67888888888888888888888888888888888777776666542 457778
Q ss_pred cccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 227 DLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 227 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
++++|++++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|+++
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLE 144 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCS
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCC
Confidence 888888774 4542 2577888888888877 4543 3678888888888774 3321 157888888888887
Q ss_pred CCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCcccccc
Q 043316 307 GSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIG 386 (1031)
Q Consensus 307 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 386 (1031)
+ +| .++++++|++|++++|++++ +|..+ ++|++|++++|++++ +| .++.+++|++|++++|++++ +|...
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~- 214 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP- 214 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-
Confidence 5 66 57778888888888888775 45443 477788888887776 34 57777788888888887775 33322
Q ss_pred CCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccc
Q 043316 387 NLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTF 466 (1031)
Q Consensus 387 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L 466 (1031)
++|++|++++|++..+ | .|..+++|++|++++|++.+++. ..++|+.|++++|++++++.. .++|++|
T Consensus 215 --~~L~~L~l~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~l~~~----~~~L~~L 282 (454)
T 1jl5_A 215 --LSLESIVAGNNILEEL-P-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTDLPEL----PQSLTFL 282 (454)
T ss_dssp --TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSCCCCC----CTTCCEE
T ss_pred --CcccEEECcCCcCCcc-c-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccccCcc----cCcCCEE
Confidence 4677777777777643 3 36677777777777777665432 235677777777666654321 2455555
Q ss_pred cCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhcc-ccCceeecccccccCCCcccccccCccceeecCcCcC
Q 043316 467 NASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKL-FSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKL 545 (1031)
Q Consensus 467 ~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 545 (1031)
++++|.+.+. |. -.++|++|++++|++++. ..+ ++|+.|++++|++++ +|.. +++|++|++++|++
T Consensus 283 ~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l 349 (454)
T 1jl5_A 283 DVSENIFSGL-SE---LPPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHL 349 (454)
T ss_dssp ECCSSCCSEE-SC---CCTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred ECcCCccCcc-cC---cCCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcc
Confidence 5555555431 11 013455555555555431 111 245555555555553 3322 34455555555555
Q ss_pred CCCCcccccCCCccceecccCcccCC--CCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCC--CC
Q 043316 546 SSSIPKSMGNLSKLHYLNLSNNQFNH--KIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFD--LI 621 (1031)
Q Consensus 546 ~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~ 621 (1031)
+ .+|. .+++|++|++++|++++ .+|..+.. |+.|.+.+.+|.. +++|+.|++++|++++ .+
T Consensus 350 ~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~i 414 (454)
T 1jl5_A 350 A-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDI 414 (454)
T ss_dssp S-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------------------------------
T ss_pred c-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccc
Confidence 4 2333 23455555555555544 33333322 2233444444432 2566677777777665 22
Q ss_pred ccccccCCcceEEecccccccCCCC
Q 043316 622 PGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 622 ~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|. +++.|.+.+|.+.+++|
T Consensus 415 P~------sl~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 415 PE------SVEDLRMNSERVVDPYE 433 (454)
T ss_dssp -------------------------
T ss_pred hh------hHhheeCcCcccCCccc
Confidence 32 34555566666666554
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.7e-43 Score=410.83 Aligned_cols=387 Identities=24% Similarity=0.274 Sum_probs=301.3
Q ss_pred CCCCccce--eEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccC
Q 043316 62 ISPCTWFG--IFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSG 139 (1031)
Q Consensus 62 ~~~C~w~g--v~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~ 139 (1031)
.+.|.|.| |.|+..+ + ..+|. + .++|++|+|++|.+++..|..++++++|++|+|++|.+.+
T Consensus 5 ~~~c~~~~~~~~c~~~~-----------l-~~lp~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~ 68 (455)
T 3v47_A 5 TSECSVIGYNAICINRG-----------L-HQVPE--L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGL 68 (455)
T ss_dssp --CCEEETTEEECCSSC-----------C-SSCCC--C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTC
T ss_pred cceeEEEccccCcCCCC-----------c-ccCCC--C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccc
Confidence 35677766 7886532 1 12333 1 2689999999999998889999999999999999999987
Q ss_pred CC-CccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCc--ccccccccEEEecccccccccCcc
Q 043316 140 VI-PQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPS--LGNLSNLAYLYLNNNSLFGSIPNV 216 (1031)
Q Consensus 140 ~~-p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~--~~~l~~L~~L~l~~n~l~~~~p~~ 216 (1031)
.+ |..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++.+|.. ++++++|++|+|++|++++..|..
T Consensus 69 ~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 148 (455)
T 3v47_A 69 VIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS 148 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG
T ss_pred eECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc
Confidence 76 567999999999999999999888999999999999999999999866655 999999999999999999877876
Q ss_pred -cccccccccccccccccccccCcccccc--CcccEEEeecCcCCCCCCccc--------cccccccccccccccccccC
Q 043316 217 -MGNLNSLSILDLSQNQLRGSIPFSLANL--SNLGILYLYKNSLFGFIPSVI--------GNLKSLFELDLSENQLFGSI 285 (1031)
Q Consensus 217 -~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~Ls~N~l~~~~ 285 (1031)
++++++|++|+|++|++++..|..+..+ .+|+.|++++|.+++..+..+ ..+++|++|++++|++++..
T Consensus 149 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~ 228 (455)
T 3v47_A 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESM 228 (455)
T ss_dssp GGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHH
T ss_pred ccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccc
Confidence 8999999999999999998889888877 789999999999988765543 36789999999999999888
Q ss_pred CcccccC---CCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccc--ccCceEEcccCCCcCccCCc
Q 043316 286 PLSFSNL---SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL--SSLRTLYLYDNGFYGLVPNE 360 (1031)
Q Consensus 286 p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~ 360 (1031)
|..+... ++|+.|++++|.+.+... ..+.+.+..+..+..+ ++|++|++++|.+++..|..
T Consensus 229 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 294 (455)
T 3v47_A 229 AKRFFDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSV 294 (455)
T ss_dssp HHHHHHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTT
T ss_pred hhhhhccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhh
Confidence 8877655 889999999988764321 1222332223333332 57788888888887777777
Q ss_pred cCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCC
Q 043316 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440 (1031)
Q Consensus 361 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 440 (1031)
++.+++|++|++++|++++..|..|.++++|++|++++|++.+..+..|.++++|++|++++|++.++.+..|..+++|+
T Consensus 295 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 374 (455)
T 3v47_A 295 FSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLK 374 (455)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred cccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccccccc
Confidence 77778888888888887777777777777777777777777777777777777777777777777666666666666666
Q ss_pred eeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCCh
Q 043316 441 FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIP 502 (1031)
Q Consensus 441 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 502 (1031)
+|+|++|+++ +..+..+..+++|++|++++|++++..|
T Consensus 375 ~L~L~~N~l~------------------------~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 375 ELALDTNQLK------------------------SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EEECCSSCCS------------------------CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EEECCCCccc------------------------cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 6666665554 3344456677788888888888877665
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4e-43 Score=413.42 Aligned_cols=252 Identities=19% Similarity=0.249 Sum_probs=202.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHH---HHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLN---EVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~---Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.++||+|+||+||+|+. .+|+.||||++.+...... .....+.+ ++.+++.++|||||+++++|++.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~-~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-TCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchh-hhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 47899999999999999999954 5799999999977554322 22333334 4667778899999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
+|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ |||||||||+|||++.+|++||+|||+|+
T Consensus 267 lylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999998643 589999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.+... .....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||........ ......+ ......++.
T Consensus 341 ~~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~i-~~~~~~~p~ 415 (689)
T 3v5w_A 341 DFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMT-LTMAVELPD 415 (689)
T ss_dssp ECSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHHH-HHCCCCCCT
T ss_pred ecCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhh-cCCCCCCCc
Confidence 77543 2345789999999999964 5799999999999999999999999865433211 1111111 111222222
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
. ...++.++|.+||++||.+|++ ++||++
T Consensus 416 ~------~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 416 S------FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp T------SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred c------CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1 1235778999999999999998 677753
No 47
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.1e-42 Score=414.65 Aligned_cols=252 Identities=20% Similarity=0.343 Sum_probs=208.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ..+.+.+.+|+++++.++|||||++++++.+++.+|+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 36899999999999999999954 579999999986643 2346778999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC--CceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE--HEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~ 914 (1031)
||||++||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.+ +.+||+|||+|+.
T Consensus 232 v~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EEECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EEeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 999999999999986542 3588999999999999999999999 99999999999999854 8999999999998
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
+.+. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ... ..+... ...++ .
T Consensus 307 ~~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--~~~---~~i~~~-~~~~~--~ 377 (573)
T 3uto_A 307 LDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETL---RNVKSC-DWNMD--D 377 (573)
T ss_dssp CCTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHH---HHHHTT-CCCCC--S
T ss_pred ccCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHH---HHHHhC-CCCCC--c
Confidence 7543 3445678999999999999999999999999999999999999998754431 111 111111 11111 1
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+.++|.+||+.||.+|||+.|+++
T Consensus 378 ~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 378 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111112235778999999999999999999986
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7.2e-42 Score=402.05 Aligned_cols=389 Identities=23% Similarity=0.210 Sum_probs=226.7
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCC-ccccCcccCceeeccC
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIP-LEIGKLSLINVLTLCH 182 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~ 182 (1031)
+.++.++++++ .+|. + .++|++|||++|.+++..|..|+++++|++|++++|.+.+.+| ..|+++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45677777776 6665 3 2678888888888877667778888888888888877766654 4577777777777777
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcc--cccccccccccccccccccccCcc-ccccCcccEEEeecCcCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNV--MGNLNSLSILDLSQNQLRGSIPFS-LANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~ 259 (1031)
|.+++..|..|+++++|++|+|++|++++.+|.. |+++++|++|+|++|++++..|.. +.++++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 7777666777777777777777777776644443 666666666666666666555554 5666666666666666666
Q ss_pred CCCcccccc--ccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccc
Q 043316 260 FIPSVIGNL--KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI 337 (1031)
Q Consensus 260 ~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 337 (1031)
..|..+..+ .+|+.|++++|.+.+..+..++. .....+..+++|++|++++|++.+.+|..+
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhh
Confidence 555555544 44555555555544322211110 000011223334444444444444444433
Q ss_pred ccc---ccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccC--CCCCceEeccCcccCCcCchhccCC
Q 043316 338 GNL---SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGN--LTKLVLVNMCENHLFGLIPKSFRNL 412 (1031)
Q Consensus 338 ~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~l~~N~l~~~~~~~~~~l 412 (1031)
..+ ++|+.|++++|.+.+... ..+.+.+..+..+.. .++|+.|++++|++.+..|..|..+
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred hccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 332 445555555554432210 111111111112221 1345555555555554444445455
Q ss_pred ccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEe
Q 043316 413 TSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDL 492 (1031)
Q Consensus 413 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L 492 (1031)
++|++|++++|++.++.+..|..+++|++|+|++| .+.+..|..|..+++|++|+|
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N------------------------~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN------------------------FLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS------------------------CCCEECGGGGTTCTTCCEEEC
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCC------------------------ccCCcChhHhcCcccCCEEEC
Confidence 55555555555444444444444445555555544 444444555666677777777
Q ss_pred eCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCc
Q 043316 493 SSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIP 550 (1031)
Q Consensus 493 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 550 (1031)
++|++++..|..|..+++|++|++++|++++..+..|..+++|++|++++|++++..|
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 7777776667777777777777777777776666667777888888888888776554
No 49
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.8e-41 Score=378.43 Aligned_cols=281 Identities=32% Similarity=0.558 Sum_probs=225.5
Q ss_pred CccccHHHHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeee
Q 043316 746 NGKFLYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFH 825 (1031)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~ 825 (1031)
...+.+.++....++|++.+.||+|+||.||+|+..+++.||||++...... .....+.+|++++++++||||++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccceE
Confidence 3467888999999999999999999999999998888999999999765421 2233688999999999999999999
Q ss_pred eeEecCCeeEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 826 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
+++.+.+..++||||+++|+|.++++... ....+++..+..++.|++.||+|||+.+.+||+||||||+||+++.++.+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 99999999999999999999999998654 23458999999999999999999999877799999999999999999999
Q ss_pred EEeccccccccCCCCCC-ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 905 HVSDFGIAKFLNPHSSN-WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||+|||++......... .....||+.|+|||++.+..++.++||||+||++|||++|+.||+.................
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 99999999876543332 33456899999999998888999999999999999999999998632211110001111111
Q ss_pred ---------hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 984 ---------QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 984 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...+..... ....+....+.+++.+||+.||++|||++||++.|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 111111111 1223455678999999999999999999999999974
No 50
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.9e-41 Score=375.78 Aligned_cols=256 Identities=30% Similarity=0.446 Sum_probs=202.8
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||+||+|+. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 46899999999999999999977 788999999876542 223467889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
|||+++|+|.+++........+++..++.++.|++.||+|||+. | |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999999998765445689999999999999999999999 8 999999999999999999999999999865
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh-hhcCCCCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN-QNLDHRLPTPS 994 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 994 (1031)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....... .......+..
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~~~~~~~~~~~~~~~~~- 263 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QVVAAVGFKCKRLEIPRN- 263 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHHHHHHHSCCCCCCCTT-
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhcCCCCCCCcc-
Confidence 54433345677999999999999999999999999999999999999998754431 1111111 1111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 264 -----~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 264 -----LNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp -----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1235778999999999999999999999886
No 51
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.4e-41 Score=370.30 Aligned_cols=249 Identities=26% Similarity=0.398 Sum_probs=208.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc----ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 6799999999999999999964 679999999986543 23467789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999999754 378899999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..........+.... +.
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~-~~-- 240 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-----ALYLIATNGTPELQN-PE-- 240 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHHCSCCCSC-GG--
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhCCCCCCCC-cc--
Confidence 5555566789999999999999999999999999999999999999986543311 111111111111111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.||++|||++|+++
T Consensus 241 -~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 241 -KLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -ccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 12235778999999999999999999975
No 52
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=367.41 Aligned_cols=253 Identities=26% Similarity=0.440 Sum_probs=208.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||+||+|.. .+++.||+|++... +....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 6789999999999999999965 57999999988553 234567899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999998643 3589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCC--------------ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH-h
Q 043316 918 HSSN--------------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE-I 982 (1031)
Q Consensus 918 ~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~-~ 982 (1031)
.... .....||+.|+|||++.+..++.++||||+|+++|||++|..||................ .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 240 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc
Confidence 3221 114578999999999999999999999999999999999999976544432222222211 1
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+...+ ..+.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~~~~~~~----------~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 241 DRYCPPNCP----------PSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHTCCTTCC----------TTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCCCC----------HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111222222 24678899999999999999999999886
No 53
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.5e-40 Score=367.91 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=215.3
Q ss_pred ccccHHHHHHHHhc----------cCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhc
Q 043316 747 GKFLYEEIIKAIDD----------FGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE 815 (1031)
Q Consensus 747 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~ 815 (1031)
+.+.++++..+++. |...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc----hhHHHHHHHHHHHHHh
Confidence 45778888877754 777889999999999999765 79999999986543 2356778999999999
Q ss_pred CCCCceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCC
Q 043316 816 IRHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKN 895 (1031)
Q Consensus 816 l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 895 (1031)
++||||+++++++...+..++||||+++++|.+++... .+++.++..++.|++.||+|||+. ||+||||||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 99999999999999999999999999999999998753 489999999999999999999999 99999999999
Q ss_pred eeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhh
Q 043316 896 VLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF 975 (1031)
Q Consensus 896 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~ 975 (1031)
|+++.++.+||+|||++..............||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---- 247 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---- 247 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 9999999999999999987765444455678999999999999989999999999999999999999998644321
Q ss_pred hhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 976 SNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.....+..... ......+.+++.+||+.||++|||++|+++
T Consensus 248 -~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 248 -QAMKRLRDSPPPKLKNS----HKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -HHHHHHHHSSCCCCTTG----GGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHHHHhcCCCCCcCcc----ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11222222222222111 112235778999999999999999999986
No 54
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.8e-40 Score=369.26 Aligned_cols=269 Identities=30% Similarity=0.476 Sum_probs=217.2
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++....++|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES----SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3445668899999999999999999998889999999986542 234678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999976532 23589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-hhh-hHHH-----h
Q 043316 912 AKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-FSN-MITE-----I 982 (1031)
Q Consensus 912 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-~~~-~~~~-----~ 982 (1031)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ... .... .
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 986543221 233456899999999999889999999999999999999999998654332111 110 0000 0
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....++..... ...+....+.+++.+||+.||++|||++|+++.|+
T Consensus 266 ~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 266 EQIVDPNLADK--IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CSSSSSSCTTC--SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcChhhccc--cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111221111 12345567889999999999999999999999986
No 55
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.7e-40 Score=367.40 Aligned_cols=251 Identities=23% Similarity=0.293 Sum_probs=208.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+. .+++.||+|++++.... .....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 46899999999999999999965 47999999999765432 23456788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++...
T Consensus 83 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 999999999999997643 588999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..... .+.. ....++..
T Consensus 157 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~---~i~~-~~~~~p~~--- 227 (337)
T 1o6l_A 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFE---LILM-EEIRFPRT--- 227 (337)
T ss_dssp CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH---HHHH-CCCCCCTT---
T ss_pred cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHH---HHHc-CCCCCCCC---
Confidence 444445667899999999999998999999999999999999999999864332 11111 1111 11122211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||++|| +++|+++
T Consensus 228 ---~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 228 ---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 123577889999999999999 8999875
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.8e-40 Score=374.01 Aligned_cols=256 Identities=23% Similarity=0.386 Sum_probs=208.9
Q ss_pred hccCccceeecCCCccEEEEEe--------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
++|.+.+.||+|+||.||+|+. .++..||||+++... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 6799999999999999999964 245689999997643 233567899999999999 8999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+.+..|+||||+++|+|.+++..... ...+++.++..++.||+.||+|||++ ||+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 99999999999999999999976432 23578999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-- 312 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 312 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 999999999999999987654322 2233456789999999999899999999999999999999 99998754331
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
. ....+........+.. ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 313 ~---~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 313 E---LFKLLKEGHRMDKPAN------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp G---HHHHHHTTCCCCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred H---HHHHHhcCCCCCCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1 1122222222222211 12357788999999999999999999999863
No 57
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.9e-40 Score=368.80 Aligned_cols=249 Identities=23% Similarity=0.369 Sum_probs=206.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 46799999999999999999965 6899999999976542 23356778999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999997643 488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCC-ccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRAT-EKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. .......||+.|+|||++.+..+. .++||||+||++|||++|+.||+.... .... ..+... ....+..
T Consensus 166 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~---~~i~~~-~~~~p~~-- 236 (328)
T 3fe3_A 166 VG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELR---ERVLRG-KYRIPFY-- 236 (328)
T ss_dssp SS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT--
T ss_pred CC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHH---HHHHhC-CCCCCCC--
Confidence 43 334566799999999999887764 899999999999999999999875432 1111 111111 1112211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||.+|||++|+++
T Consensus 237 ----~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 237 ----MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ----SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1235678899999999999999999975
No 58
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.6e-39 Score=360.80 Aligned_cols=277 Identities=29% Similarity=0.476 Sum_probs=224.3
Q ss_pred ccccHHHHHHHHhccCcc------ceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc
Q 043316 747 GKFLYEEIIKAIDDFGEK------YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN 820 (1031)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n 820 (1031)
..+.+.++..++.+|... +.||+|+||.||+|.. +++.||||++............+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 467889999999998877 8999999999999987 788999999876443333345678999999999999999
Q ss_pred eeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC
Q 043316 821 IIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 821 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
|+++++++.+.+..++||||+++++|.+++........+++..++.++.|++.||+|||+. ||+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997655455689999999999999999999999 9999999999999999
Q ss_pred CCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch--hhh
Q 043316 901 EHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS--SFS 976 (1031)
Q Consensus 901 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~--~~~ 976 (1031)
++.+||+|||++......... .....|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||+....... .+.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543221 234568999999998875 588999999999999999999999875543211 111
Q ss_pred hhHH----HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMIT----EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.... ......+....... ......+.+++.+||+.||.+|||++|+++.|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSCCC---HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhccccccccc---hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 1111 11122223332222 2344578899999999999999999999999873
No 59
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-39 Score=378.77 Aligned_cols=188 Identities=20% Similarity=0.226 Sum_probs=91.2
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
++++++|++|++++|.+++ +| .++.+++|++|+|++|++++. | ++.+++|++|++++|++++ +| ++++++|+
T Consensus 38 ~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~ 109 (457)
T 3bz5_A 38 EEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLT 109 (457)
T ss_dssp HHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCC
T ss_pred hhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCC
Confidence 4455555555555555553 23 455555555555555555532 2 5555555555555555553 22 45555555
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|++++ +| ++++++|++|++++|++++ +| ++++++|++|++++|+..+.+ .++.+++|+.|++++|+
T Consensus 110 ~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~ 181 (457)
T 3bz5_A 110 YLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNK 181 (457)
T ss_dssp EEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCc
Confidence 55555555553 33 4555555555555555543 22 444555555555555333333 24444444444444444
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
+++. | ++.+++|++|++++|++++. .++.+++|+.|++++|+++
T Consensus 182 l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~ 225 (457)
T 3bz5_A 182 ITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT 225 (457)
T ss_dssp CCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCS
T ss_pred ccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccc
Confidence 4442 2 44444444444444444432 1344444444444444444
No 60
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.9e-40 Score=369.22 Aligned_cols=254 Identities=21% Similarity=0.278 Sum_probs=207.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
++|.+.+.||+|+||.||+|.. .+|+.||||++++...... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 6799999999999999999965 4799999999976543221 124678999999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~ 911 (1031)
+||||+++|+|.+++.... .+++.++..++.||+.||+|||+. ||+||||||+||+++.++ .+||+|||+
T Consensus 92 lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 92 LILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999997643 588999999999999999999999 999999999999998877 799999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||...... ... ..+.. ....
T Consensus 166 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--~~~---~~i~~---~~~~ 236 (361)
T 2yab_A 166 AHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETL---ANITA---VSYD 236 (361)
T ss_dssp CEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHH---HHHHT---TCCC
T ss_pred ceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HHH---HHHHh---cCCC
Confidence 9876543 2345567999999999999989999999999999999999999998654321 111 11111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............+.++|.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111122346788999999999999999999975
No 61
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=369.48 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=196.5
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 46799999999999999999964 68999999998765432 234568899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 86 v~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 999999999999997643 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC-CCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 917 PHS-SNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 917 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.... ... ...+.... ...+..
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--~~~---~~~i~~~~-~~~p~~- 232 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--MAL---YKKIMRGK-YDVPKW- 232 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH---HHHHHHTC-CCCCTT-
T ss_pred CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--HHH---HHHHHcCC-CCCCCC-
Confidence 332 23455679999999999988775 8899999999999999999999875432 111 11111111 111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 233 -----~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 233 -----LSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp -----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----CCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1124667899999999999999999985
No 62
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.4e-40 Score=367.57 Aligned_cols=262 Identities=26% Similarity=0.354 Sum_probs=204.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC----ee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----HS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----~~ 834 (1031)
++|++.++||+|+||+||+|+. .++.||||++.... .....+.+|+.++++++||||+++++++.+.. ..
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQD-----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhchhhheecccCceEEEEEEE-CCCEEEEEEeecCc-----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 6799999999999999999987 48999999986542 23445667999999999999999999998744 46
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC-------CCCCeeeCCCCCCCeeeCCCCceEEe
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD-------CLPPIVHGDISSKNVLLDSEHEAHVS 907 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------~~~~ivH~Dlkp~NIll~~~~~~kl~ 907 (1031)
++||||+++|+|.++++.. .+++.+++.++.|++.||+|||+. +.++|+||||||+||+++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999999754 389999999999999999999976 22389999999999999999999999
Q ss_pred ccccccccCCCCC--CceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchh------
Q 043316 908 DFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS------ 974 (1031)
Q Consensus 908 Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~------ 974 (1031)
|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.........
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999987654332 2234678999999999886 35677899999999999999999998754332111
Q ss_pred -----hhhhHHHhh-hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 975 -----FSNMITEIN-QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 975 -----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......... ....+..+. ..........+.+++.+||+.||++|||++|+++.|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRD-YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCG-GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccc-cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 011111111 111111111 01112334568899999999999999999999999873
No 63
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.2e-39 Score=362.05 Aligned_cols=261 Identities=19% Similarity=0.296 Sum_probs=203.0
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||+||+|+..+++.||||++..... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 368999999999999999999888899999999976432 223357788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++ ++.+++.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 999985 7877776543 3588999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCC-------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR------- 989 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~------- 989 (1031)
.........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .............+..
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTS
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhcc
Confidence 5455566788999999999876 568999999999999999999999987554321 1111111110000000
Q ss_pred ----------CCCCChh--HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 990 ----------LPTPSRD--VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 990 ----------~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....... ......++.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 0011235778999999999999999999986
No 64
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.7e-40 Score=371.63 Aligned_cols=258 Identities=21% Similarity=0.251 Sum_probs=207.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh-hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+.+|+.++++++||||+++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35799999999999999999955 579999999986543221 1224678999999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~ 911 (1031)
+||||+++++|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988886542 223478999999999999999999999 9999999999999987665 99999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+..............||+.|+|||++.+..++.++||||+||++|||++|+.||..... . ....+.. ....
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~---~~~~i~~---~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---R---LFEGIIK---GKYK 250 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---H---HHHHHHH---TCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---H---HHHHHHc---CCCC
Confidence 98876544444567899999999999998999999999999999999999999865321 1 1111111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111122346788999999999999999999975
No 65
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.8e-40 Score=362.73 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=200.8
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhc--CCCCceeeeeeeEec----C
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE--IRHRNIIKFHGFCSN----A 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~~~~~~----~ 831 (1031)
.++|++.+.||+|+||+||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++.+ .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 36799999999999999999987 7999999998653 23445566666555 799999999998654 3
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhh--------hCCCCCeeeCCCCCCCeeeCCCCc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH--------HDCLPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
...++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 5689999999999999999643 4889999999999999999999 77 9999999999999999999
Q ss_pred eEEeccccccccCCCCCC----ceeeccccCcccccccccc------CCCccccchhhhHHHHHHHhC----------CC
Q 043316 904 AHVSDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMM------RATEKYDVHSFGVLALEVIKG----------NH 963 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltG----------~~ 963 (1031)
+||+|||+++........ .....||+.|+|||++.+. .+++++||||+||++|||+|| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999876543322 2234789999999999876 456799999999999999999 77
Q ss_pred CCCCcCccchhhhhhHHHhhhh-cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 964 PRDYVSTNFSSFSNMITEINQN-LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 964 P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
||.................... ..+..+. ..........+.+++.+||+.||++|||++||++.|++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPN-RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCCh-hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 7754433322222222211111 1111111 11122345578899999999999999999999999874
No 66
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.8e-40 Score=373.86 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=201.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 835 (1031)
.++|++.++||+|+||.||+|+. .+++.||||++++..... ....+.+.+|..++.++ +||||+++++++.+.+..+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 46899999999999999999965 468899999998754322 23345678899998877 8999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++..
T Consensus 130 lV~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999997643 589999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh---hhh-hHHHhhhhcCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS---FSN-MITEINQNLDHRLP 991 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~---~~~-~~~~~~~~~~~~~~ 991 (1031)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ... ....+. .....++
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~-~~~~~~p 282 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIP 282 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHH-HCCCCCC
T ss_pred ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHh-ccccCCC
Confidence 44444556678999999999999999999999999999999999999998644321111 011 111111 1122222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
.. ...++.+++.+||+.||++||++
T Consensus 283 ~~------~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 283 RS------LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp TT------SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred Cc------CCHHHHHHHHHHhcCCHhHcCCC
Confidence 21 12357789999999999999985
No 67
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.9e-40 Score=378.53 Aligned_cols=255 Identities=20% Similarity=0.283 Sum_probs=207.6
Q ss_pred HHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
..++|++.+.||+|+||.||+|. ..+++.||+|++...... ..+.+.+.+|+.++++++||||+++++++.+++..+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS--ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH--HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 45789999999999999999995 467999999999765432 234677899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---CCCceEEeccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD---SEHEAHVSDFGIA 912 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a 912 (1031)
+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 9999999999999997653 488999999999999999999999 999999999999998 4678999999999
Q ss_pred cccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 913 KFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 913 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
..............||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+....... +.
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~~~----~~ 234 (444)
T 3soa_A 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--HRLYQQIKAGAYDF----PS 234 (444)
T ss_dssp BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTCCCC----CT
T ss_pred EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHhCCCCC----Cc
Confidence 8876555555667899999999999998999999999999999999999999864432 11111111111111 11
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+.+++.+||+.||++|||+.|+++
T Consensus 235 --~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 235 --PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp --TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 011111235778999999999999999999986
No 68
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=360.33 Aligned_cols=263 Identities=20% Similarity=0.295 Sum_probs=209.9
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC--eeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--HSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--~~~ 835 (1031)
++|.+.+.||+|+||+||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 57899999999999999999654 699999999976432 234677889999999999999999999998765 779
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee----CCCCceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL----DSEHEAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~ 911 (1031)
+||||+++++|.+++........+++.+++.++.|++.||+|||+. ||+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998765545589999999999999999999999 99999999999999 7888899999999
Q ss_pred ccccCCCCCCceeeccccCcccccccc--------ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAH--------MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
++...... ......||+.|+|||++. +..++.++||||+||++|||+||+.||......... ......+.
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~ 240 (319)
T 4euu_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKII 240 (319)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC-HHHHHHHH
T ss_pred ceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh-HHHHHHHh
Confidence 98775433 334567999999999986 467899999999999999999999998643332111 11111111
Q ss_pred hhcC------------------CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 984 QNLD------------------HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 984 ~~~~------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
...+ ...+............+.+++.+||+.||++|||++|+++..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 1111 112222222234445688999999999999999999999864
No 69
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=363.32 Aligned_cols=254 Identities=26% Similarity=0.446 Sum_probs=204.8
Q ss_pred HhccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|.+.+.||+|+||.||+|... .+..||||+++... .....+.+.+|+.++++++||||+++++++.+++.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 367899999999999999999763 34569999997643 22346789999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 999999999999999997543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 914 FLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 914 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
........ .....+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... .....+.......
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 274 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVISSVEEGYRLP 274 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHHHHTTCCCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHcCCCCC
Confidence 77543222 223345778999999998899999999999999999999 99998644331 1112222221111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+. .....+.+++.+||+.||++|||++||++.|+
T Consensus 275 ~~~------~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 275 APM------GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC------CcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 11236778999999999999999999999986
No 70
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-40 Score=364.20 Aligned_cols=251 Identities=21% Similarity=0.284 Sum_probs=206.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 36799999999999999999965 468999999986542 245678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC--CCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS--EHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~ 914 (1031)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||++..
T Consensus 79 v~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 999999999999997643 3588999999999999999999999 9999999999999997 78999999999988
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... . ....+.. .......
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~---~~~~i~~---~~~~~~~ 224 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--Q---IIENIMN---AEYTFDE 224 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHH---TCCCCCH
T ss_pred CCCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--H---HHHHHHc---CCCCCCh
Confidence 7543 3345677999999999999888899999999999999999999998654321 1 1111111 1111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........++.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111122346789999999999999999999986
No 71
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-39 Score=354.41 Aligned_cols=252 Identities=23% Similarity=0.418 Sum_probs=208.8
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-----cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 5789999999999999999988889999999997643 24567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999997643 3588999999999999999999999 9999999999999999999999999999866432
Q ss_pred C-CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 S-SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....+........+...
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~-- 232 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRLA-- 232 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCCCCTTS--
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHhcCccCCCCCcC--
Confidence 1 11233456778999999998899999999999999999999 99998754331 112222222222222111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...+.+++.+||+.||++|||++|+++.|++
T Consensus 233 ----~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 233 ----STHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 2357788999999999999999999999863
No 72
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=369.92 Aligned_cols=252 Identities=24% Similarity=0.332 Sum_probs=201.9
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|+. .+++.||||++++.... .....+.+.+|..+++.+ +||||+++++++.+.+..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc-chhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 357899999999999999999965 56899999999775432 234567788999999988 699999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999999997643 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
............||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... ..+... ...++..
T Consensus 174 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~---~~i~~~-~~~~p~~- 246 (353)
T 3txo_A 174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--DLF---EAILND-EVVYPTW- 246 (353)
T ss_dssp SCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHHC-CCCCCTT-
T ss_pred cccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--HHH---HHHHcC-CCCCCCC-
Confidence 544444455678999999999999989999999999999999999999998654331 111 111111 1111211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCH------HHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTM------KKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~ 1027 (1031)
....+.+++.+||++||++||++ +|+++
T Consensus 247 -----~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 247 -----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -----SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -----CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 12256788999999999999998 66653
No 73
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.5e-40 Score=360.67 Aligned_cols=258 Identities=24% Similarity=0.327 Sum_probs=203.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+. .+++.||+|++..... ......+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 5799999999999999999964 5789999999865432 2234467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999997643 588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
... ......||+.|+|||.+.+..++.++||||+|+++|||+||+.||......... .... ....+.....
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~----~~~~----~~~~~~~~~~ 235 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA----IKHI----QDSVPNVTTD 235 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH----HHHH----SSCCCCHHHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHh----hccCCCcchh
Confidence 322 233457899999999999989999999999999999999999998755432111 1111 1111110000
Q ss_pred -HHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhhC
Q 043316 997 -VMDKLMSIMEVAILCLVESPEARP-TMKKVCNLLCK 1031 (1031)
Q Consensus 997 -~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~ 1031 (1031)
..+....+.+++.+|++.||++|| +++++.+.|++
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 001123678899999999999998 89999988763
No 74
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.2e-39 Score=352.18 Aligned_cols=252 Identities=25% Similarity=0.450 Sum_probs=208.5
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|+..++..||||+++... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-----MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-----BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-----CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 6799999999999999999998888899999997643 24567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999997643 3588999999999999999999999 9999999999999999999999999999876443
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||+..... ..............+...
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~-- 230 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLKVSQGHRLYRPHLA-- 230 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCCCCCCTTS--
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHHHHcCCCCCCCCcC--
Confidence 22 1223445678999999998889999999999999999999 99998654432 111111111111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
...+.+++.+||+.||++|||++|+++.|++
T Consensus 231 ----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (268)
T 3sxs_A 231 ----SDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261 (268)
T ss_dssp ----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGG
T ss_pred ----hHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1257789999999999999999999999874
No 75
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.9e-39 Score=363.04 Aligned_cols=252 Identities=19% Similarity=0.336 Sum_probs=203.7
Q ss_pred HHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC---
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--- 832 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--- 832 (1031)
..++|++.+.||+|+||.||+|+.. +++.||||+++... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence 3578999999999999999999664 89999999997543 2335678999999999999999999999986543
Q ss_pred ------------------------------------------------------eeEEEEEeccCCCchhhcccCCcccc
Q 043316 833 ------------------------------------------------------HSFIVSEYLDRGSLTTILKDDAAAKE 858 (1031)
Q Consensus 833 ------------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~ 858 (1031)
..++||||+++++|.+++........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 37999999999999999988766666
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC------------Cceeec
Q 043316 859 FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS------------NWTAFA 926 (1031)
Q Consensus 859 l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~ 926 (1031)
.++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....... ......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 77888999999999999999999 999999999999999999999999999987754321 223456
Q ss_pred cccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHH
Q 043316 927 GTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIME 1006 (1031)
Q Consensus 927 gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1006 (1031)
||+.|+|||++.+..++.++||||+||++|||++|..|+.. ........ .... .+.........+.+
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~---~~~~---~~~~~~~~~~~~~~ 304 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDV---RNLK---FPLLFTQKYPQEHM 304 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHH---HTTC---CCHHHHHHCHHHHH
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHh---hccC---CCcccccCChhHHH
Confidence 89999999999998999999999999999999998777211 11111111 1111 12223344456788
Q ss_pred HHHhhccCCCCCCCCHHHHHH
Q 043316 1007 VAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1007 li~~cl~~dP~~Rps~~evl~ 1027 (1031)
++.+||+.||++|||++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999986
No 76
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.3e-39 Score=375.62 Aligned_cols=221 Identities=19% Similarity=0.222 Sum_probs=140.8
Q ss_pred CCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccccccccc
Q 043316 134 NNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSI 213 (1031)
Q Consensus 134 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~ 213 (1031)
.....+..+..++++++|++|++++|.+++ +| .++.+++|++|+|++|++++ +| ++++++|++|++++|++++ +
T Consensus 27 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~ 100 (457)
T 3bz5_A 27 AFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-L 100 (457)
T ss_dssp HTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-C
T ss_pred hcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-e
Confidence 334455556677778888888888888774 45 57777888888888887775 44 7777777788877777775 3
Q ss_pred CcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCC
Q 043316 214 PNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLS 293 (1031)
Q Consensus 214 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 293 (1031)
| ++++++|++|+|++|++++ +| ++.+++|++|++++|++++. .++++++|++|++++|+..+.+ .+..++
T Consensus 101 ~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~ 170 (457)
T 3bz5_A 101 D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQT 170 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCT
T ss_pred e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCC
Confidence 3 6777777777777777775 44 67777777777777777763 2666777777777777544444 356666
Q ss_pred CCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEcc
Q 043316 294 SLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELC 373 (1031)
Q Consensus 294 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 373 (1031)
+|+.|++++|++++ +| ++.+++|+.|++++|++++. .++.+++|++|++++|++++ +| ++.+++|+.|+++
T Consensus 171 ~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 171 QLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCS 241 (457)
T ss_dssp TCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECC
T ss_pred cCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEee
Confidence 66666666666664 33 44555555555555555543 24445555555555555544 23 4444555555555
Q ss_pred ccccCC
Q 043316 374 RNHLSG 379 (1031)
Q Consensus 374 ~N~l~~ 379 (1031)
+|++++
T Consensus 242 ~N~l~~ 247 (457)
T 3bz5_A 242 VNPLTE 247 (457)
T ss_dssp SSCCSC
T ss_pred CCcCCC
Confidence 555543
No 77
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.1e-39 Score=355.27 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=194.6
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|.. .++.||||+++...........+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 5789999999999999999987 589999999876544333445678999999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC--------CCceEEeccc
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS--------EHEAHVSDFG 910 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--------~~~~kl~Dfg 910 (1031)
||+++++|.++++.. .+++..++.++.|++.||+|||++...+|+||||||+||+++. ++.+||+|||
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp ECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999998643 4889999999999999999999991112999999999999986 6789999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++....... .....|++.|+|||.+.+..++.++||||+|+++|||++|+.||......... ............
T Consensus 162 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~ 235 (271)
T 3dtc_A 162 LAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA----YGVAMNKLALPI 235 (271)
T ss_dssp C---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH----HHHHTSCCCCCC
T ss_pred ccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HhhhcCCCCCCC
Confidence 998764332 23457899999999999989999999999999999999999998754432111 111111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.. ....+.+++.+||+.||++|||++|+++.|++
T Consensus 236 ~~~------~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 236 PST------CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp CTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred Ccc------cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 111 12357789999999999999999999999975
No 78
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.9e-39 Score=364.91 Aligned_cols=250 Identities=25% Similarity=0.335 Sum_probs=202.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++++.... .....+.+.+|+.+++++ +||||+++++++.+.+..|+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSC-SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhc-chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 6799999999999999999965 46899999999765432 233466788999999887 89999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++...
T Consensus 88 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999997643 588999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch----hhhhhHHHhhhhcCCCCCC
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS----SFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 992 (1031)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||........ ........+.. ....++.
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~ 240 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQIRIPR 240 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH-CCCCCCT
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc-CCCCCCC
Confidence 444445667899999999999998999999999999999999999999864322110 00111111111 1122222
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
. ....+.+++.+||+.||++||++
T Consensus 241 ~------~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 241 S------LSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp T------SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred C------CCHHHHHHHHHHhcCCHhHCCCC
Confidence 1 12357788999999999999995
No 79
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=361.68 Aligned_cols=255 Identities=21% Similarity=0.307 Sum_probs=207.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+.++++++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35799999999999999999965 4799999999976443211 12467899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEeccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFG 910 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg 910 (1031)
++||||+++++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999997643 588999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .. ...+... ..
T Consensus 164 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~---~~~~~~~---~~ 234 (326)
T 2y0a_A 164 LAHKIDFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ET---LANVSAV---NY 234 (326)
T ss_dssp TCEECCTT-SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HH---HHHHHHT---CC
T ss_pred CCeECCCC-CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HH---HHHHHhc---CC
Confidence 99877533 2334567999999999999889999999999999999999999998644321 11 1111111 11
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111112346778999999999999999999986
No 80
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2e-39 Score=357.26 Aligned_cols=261 Identities=18% Similarity=0.262 Sum_probs=202.4
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 5799999999999999999965 5789999999976432 223457788999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++ ++.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999986 5555554322 3589999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC-----
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP----- 991 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 991 (1031)
.........+|+.|+|||++.+.. ++.++||||+||++|||++|+.||-........................+
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 555556678899999999988765 79999999999999999999888533332221111111111100000000
Q ss_pred -------------CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 -------------TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 -------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............+.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000000112235778999999999999999999986
No 81
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=357.39 Aligned_cols=253 Identities=21% Similarity=0.336 Sum_probs=197.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh----------------------hhcHHHHHHHHHHHh
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE----------------------MADQDEFLNEVLALT 814 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~Ei~~l~ 814 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36799999999999999999964 5789999999865432111 112457899999999
Q ss_pred cCCCCceeeeeeeEec--CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCC
Q 043316 815 EIRHRNIIKFHGFCSN--AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDIS 892 (1031)
Q Consensus 815 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 892 (1031)
+++||||+++++++.+ .+..++||||+++++|.+++.. ..+++.++..++.|++.||+|||++ ||+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999986 5688999999999999887653 3589999999999999999999999 99999999
Q ss_pred CCCeeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccccC---CCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 893 SKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR---ATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 893 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
|+||+++.++.+||+|||++..............||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987765444445567999999999987755 3788999999999999999999986443
Q ss_pred ccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 970 TNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .. ...+... ....+... .....+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~--~~---~~~~~~~-~~~~~~~~----~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 IM--CL---HSKIKSQ-ALEFPDQP----DIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HH--HH---HHHHHHC-CCCCCSSS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HH--HH---HHHHhcc-cCCCCCcc----ccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 21 11 1111111 11111110 11235778999999999999999999975
No 82
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.7e-39 Score=368.20 Aligned_cols=255 Identities=22% Similarity=0.346 Sum_probs=207.1
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
...++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 103 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH 103 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence 3457899999999999999999955 5799999999976543 223467789999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEEecccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGI 911 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~ 911 (1031)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.++ .+||+|||+
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 104 YLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EEEECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 99999999999999987643 488999999999999999999999 999999999999998654 599999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... .... ..+.... ...+
T Consensus 178 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~---~~i~~~~-~~~~ 250 (362)
T 2bdw_A 178 AIEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLY---AQIKAGA-YDYP 250 (362)
T ss_dssp CBCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHTC-CCCC
T ss_pred ceEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHH---HHHHhCC-CCCC
Confidence 9876533 334556899999999999998999999999999999999999999864432 1111 1111111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. .........+.+++.+||+.||++|||+.|+++
T Consensus 251 ~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 251 S--PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp T--TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c--ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1 111122346788999999999999999999875
No 83
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.2e-39 Score=355.99 Aligned_cols=260 Identities=23% Similarity=0.308 Sum_probs=200.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||+||+|+..+++.||||++..... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 57899999999999999999888899999999976432 2234567889999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++ +|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99985 8988887543 3588899999999999999999999 9999999999999999999999999999877544
Q ss_pred CCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh-------------
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ------------- 984 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~------------- 984 (1031)
........+|+.|+|||++.+. .++.++||||+||++|||++|+.||....... ...........
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccc
Confidence 4444556789999999998764 58999999999999999999999987544321 11111111000
Q ss_pred hcCCCCCC----CCh-hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 NLDHRLPT----PSR-DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ~~~~~~~~----~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..++.... ... ........+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000 000 00011235778999999999999999999975
No 84
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.6e-39 Score=368.16 Aligned_cols=253 Identities=24% Similarity=0.457 Sum_probs=195.8
Q ss_pred hccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.+|++.+.||+|+||.||+|+.. ++..||||+++... .....+.|.+|+.++++++||||+++++++.+.+..
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 57999999999999999999764 57789999997643 223467899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++|+|.++++... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999997643 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... .....++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~~i~~~~~~~~ 271 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEGYRLPP 271 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHHHHHTTEECCC
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCC
Confidence 6543221 122345778999999999999999999999999999998 99998644321 11122222111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+. .....+.+++.+||+.||++||++.||++.|+
T Consensus 272 ~~------~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 272 PM------DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CT------TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc------cccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 11 11236788999999999999999999999886
No 85
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.4e-39 Score=362.16 Aligned_cols=252 Identities=23% Similarity=0.313 Sum_probs=194.6
Q ss_pred HhccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.+.||+|+||.||+|+. .+++.||+|++++............+.+|+.++++++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36799999999999999999976 47899999999876543334456678899999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||+++++|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997643 478899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||...... .. ...+... ...++..
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~---~~~i~~~-~~~~p~~ 243 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--KT---IDKILKC-KLNLPPY 243 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HH---HHHHHHT-CCCCCTT
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--HH---HHHHHhC-CCCCCCC
Confidence 6544333344567899999999999989999999999999999999999998754321 11 1111111 1111211
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||++|| ++.|+++
T Consensus 244 ------~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 244 ------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ------SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ------CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 123577889999999999999 7778765
No 86
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-39 Score=365.40 Aligned_cols=252 Identities=25% Similarity=0.345 Sum_probs=206.5
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCe
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~ 833 (1031)
...++|.+.+.||+|+||.||+|+. .+++.||||++++..... ....+.+.+|..++..+ +||||+++++++.+.+.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 4567899999999999999999965 468999999997754322 23567788999998876 89999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999999997643 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++..
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~---~~i~~~-~~~~p~~ 240 (345)
T 1xjd_A 167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELF---HSIRMD-NPFYPRW 240 (345)
T ss_dssp CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT
T ss_pred hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHH---HHHHhC-CCCCCcc
Confidence 654444445667899999999999998999999999999999999999999864432 1111 111111 1122211
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHH-HHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMK-KVC 1026 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl 1026 (1031)
....+.+++.+||+.||++||++. |++
T Consensus 241 ------~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 241 ------LEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ------SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ------cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 123577889999999999999997 654
No 87
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-39 Score=361.85 Aligned_cols=252 Identities=24% Similarity=0.350 Sum_probs=202.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 36799999999999999999965 4799999999865432 1234668899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++..+.
T Consensus 83 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999999997653 488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC--CCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 917 PHS--SNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 917 ~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+........+...... ..... .
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~-----~~~~~-~ 230 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-----KTYLN-P 230 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT-----CTTST-T
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc-----cccCC-c
Confidence 222 22345678999999999987765 789999999999999999999987655432222211111 01111 1
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++.+||+.||++|||++|+++
T Consensus 231 ---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 231 ---WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1112235678999999999999999999975
No 88
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.4e-39 Score=371.63 Aligned_cols=254 Identities=23% Similarity=0.365 Sum_probs=205.9
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|... +++.||||+++... .....+.|.+|++++++++||||+++++++.+++..++
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 367899999999999999999765 78999999987542 12235578899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 190 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999999997543 3588999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 917 PHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 917 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .....++..|+|||++.++.++.++|||||||++|||+| |+.||...... ... ..+........+..
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~---~~~~~~~~~~~~~~ 339 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTR---EFVEKGGRLPCPEL 339 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHH---HHHHTTCCCCCCTT
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH---HHHHcCCCCCCCCC
Confidence 32111 112235778999999998899999999999999999998 99998754431 111 11111111111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 340 ------~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 340 ------CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp ------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1235778899999999999999999999986
No 89
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.8e-39 Score=363.38 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=206.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|++.+.... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc-cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 6799999999999999999954 56899999999765432 234577899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999998643 488999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........... ....+..
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~~~~-~~~~p~~- 242 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTFETT-VVTYPSA- 242 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHHHHC-CCCCCTT-
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhhc-ccCCCCc-
Confidence 3 33456789999999999864 458999999999999999999999986443321 11111111111 1111211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCC-HHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPT-MKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~ 1027 (1031)
....+.+++.+||+.||++||+ ++++.+
T Consensus 243 -----~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 243 -----WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1235778899999999999998 777653
No 90
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9.1e-40 Score=371.45 Aligned_cols=263 Identities=21% Similarity=0.328 Sum_probs=209.4
Q ss_pred HHHHHHHhccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeee
Q 043316 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKF 824 (1031)
Q Consensus 752 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l 824 (1031)
.+.....++|++.+.||+|+||.||+|++ .+++.||||+++.... ....+.+.+|++++.++ +||||+++
T Consensus 15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC---HHHHHHHHHHHHHHHhhcCCcceeee
Confidence 33444568899999999999999999963 3568999999976432 23457799999999999 79999999
Q ss_pred eeeEecCC-eeEEEEEeccCCCchhhcccCCc------------------------------------------------
Q 043316 825 HGFCSNAQ-HSFIVSEYLDRGSLTTILKDDAA------------------------------------------------ 855 (1031)
Q Consensus 825 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------ 855 (1031)
++++.+.+ ..++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998754 48999999999999999976532
Q ss_pred ---------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC
Q 043316 856 ---------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS 920 (1031)
Q Consensus 856 ---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 920 (1031)
...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 11288999999999999999999999 999999999999999999999999999987643322
Q ss_pred --CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 921 --NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 921 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
......+|+.|+|||++.+..++.++||||+||++|||+| |+.||......... . ...........+..
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~---~~~~~~~~~~~~~~---- 320 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-C---RRLKEGTRMRAPDY---- 320 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH-H---HHHHHTCCCCCCTT----
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH-H---HHHHcCCCCCCCCC----
Confidence 2344567899999999999999999999999999999998 99998755432211 1 11111112222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 321 --~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 321 --TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp --CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 1235778899999999999999999999986
No 91
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1e-38 Score=353.66 Aligned_cols=256 Identities=23% Similarity=0.340 Sum_probs=199.5
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|.+.++||+|+||.||+|+.. ..+|+|+++.... .....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 67999999999999999999763 3689998875432 23456789999999999999999999998754 5579999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999997543 4588999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 919 --SSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 919 --~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
........||+.|+|||++. +..++.++||||+||++|||++|+.||......... ...... ....+.....
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-~~~~~~--~~~~~~~~~~ 262 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IFMVGR--GYASPDLSKL 262 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHH--TCCCCCSTTS
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH-HHHHhc--CCCCcchhhh
Confidence 22234567899999999986 567889999999999999999999998755432111 111111 1111111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. .....+.+++.+||+.||++|||+.|+++.|+
T Consensus 263 ~~---~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 263 YK---NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CS---SSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred hc---CCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 11 11236778899999999999999999999886
No 92
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-39 Score=355.38 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=206.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+. .+|+.||+|++++.... .....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 36799999999999999999965 47999999999765432 23456788899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.++++... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 84 v~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp EECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999998643 488899999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+... ...++..
T Consensus 158 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~---~~~~i~~~-~~~~p~~--- 225 (318)
T 1fot_A 158 DV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--K---TYEKILNA-ELRFPPF--- 225 (318)
T ss_dssp SC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHHC-CCCCCTT---
T ss_pred Cc---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--H---HHHHHHhC-CCCCCCC---
Confidence 32 24567999999999999989999999999999999999999998644321 1 11111111 1122211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
...++.+++.+|++.||++|| +++|+++
T Consensus 226 ---~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 ---FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 123577889999999999999 8888874
No 93
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-39 Score=362.94 Aligned_cols=249 Identities=23% Similarity=0.303 Sum_probs=203.3
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 36799999999999999999965 67999999999765432 22345678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+ +|+|.+++... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 87 v~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 68898888654 3588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. .......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||+..... ..... +... ....+.
T Consensus 160 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~---i~~~-~~~~p~--- 229 (336)
T 3h4j_B 160 DG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP--NLFKK---VNSC-VYVMPD--- 229 (336)
T ss_dssp TS-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST--TCBCC---CCSS-CCCCCT---
T ss_pred CC-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH--HHHHH---HHcC-CCCCcc---
Confidence 33 23455679999999999988776 78999999999999999999998654321 11110 0000 011111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ....+.+++.+||+.||.+|||++|+++
T Consensus 230 ~---~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 230 F---LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp T---SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred c---CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1 1235678999999999999999999875
No 94
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.5e-38 Score=372.32 Aligned_cols=302 Identities=28% Similarity=0.376 Sum_probs=171.3
Q ss_pred CCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 99 SFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
.+++++.|+++++.+. .+|. +..+++|++|+|++|.+++. |. ++++++|++|++++|++++. |. ++++++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADI-TP-LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCCEE
T ss_pred HhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccC-hh-hcCCCCCCEE
Confidence 3556777777777766 3553 66677777777777777643 33 67777777777777777643 33 6667777777
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
+|++|.+++ +|. ++++++|++|++++|.+++ +| .++++++|++|+++ |.+.+.. .+.++++|+.|++++|.++
T Consensus 118 ~L~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITD-IDP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCC-CGG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCC-ChH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 777776663 333 6666777777777776653 33 36666666666664 4444322 2566666666666666665
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIG 338 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 338 (1031)
+. ..+..+++|++|++++|++++..| ++.+++|+.|++++|++++. +.+.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--------------------------~~l~ 240 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--------------------------GTLA 240 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--------------------------GGGG
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--------------------------hhhh
Confidence 43 235556666666666666654433 45555566666655555431 1344
Q ss_pred ccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccce
Q 043316 339 NLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERL 418 (1031)
Q Consensus 339 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 418 (1031)
.+++|++|++++|.+++..| +..+++|+.|++++|++++..+ +..+++|+.|++++|++.+..+ +..+++|+.|
T Consensus 241 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 314 (466)
T 1o6v_A 241 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYL 314 (466)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE
T ss_pred cCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEE
Confidence 45555555555555554433 4555555555555555554332 4455555555555555554433 4445555555
Q ss_pred eccccccccccccccCCCCCCCeeccccccccC
Q 043316 419 RFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451 (1031)
Q Consensus 419 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 451 (1031)
++++|++.+..+ +..+++|+.|++++|++++
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 555555544433 3445555555555555543
No 95
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.3e-39 Score=361.71 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=206.8
Q ss_pred HHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|+.. +++.||||++++.... .....+.+.+|..++..+ +||+|+++++++.+.+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 3578999999999999999999664 5889999999775432 234567888999999988 799999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++.
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999999997643 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++..
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~---~~i~~~-~~~~p~~- 243 (353)
T 2i0e_A 171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELF---QSIMEH-NVAYPKS- 243 (353)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT-
T ss_pred cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHH---HHHHhC-CCCCCCC-
Confidence 54444445567899999999999999999999999999999999999999864432 1111 111111 1112211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
...++.+++.+||+.||++||+ ++|+++
T Consensus 244 -----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 244 -----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -----SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1236778999999999999995 566653
No 96
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.5e-39 Score=352.01 Aligned_cols=252 Identities=23% Similarity=0.421 Sum_probs=205.8
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||.||+|+..+++.||||+++... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-----MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-----CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 36799999999999999999998888899999997643 2356789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 98 TEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp ECCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999997642 3589999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ......+|+.|+|||++.+..++.++||||+|+++|||+| |+.||...... .....+........+...
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~- 246 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHIAQGLRLYRPHLA- 246 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCCCCCCTTC-
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHHHhcccCCCCCCcC-
Confidence 211 1223446788999999998899999999999999999998 99998754431 111222222222222111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...+.+++.+||+.||++|||++|+++.|+
T Consensus 247 -----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 247 -----SEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp -----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -----CHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 135778999999999999999999999886
No 97
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.2e-38 Score=371.38 Aligned_cols=346 Identities=28% Similarity=0.408 Sum_probs=195.5
Q ss_pred cCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccE
Q 043316 170 GKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGI 249 (1031)
Q Consensus 170 ~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 249 (1031)
..+++|+.|++++|.++ .+|. +..+++|++|++++|.+++. |. ++++++|++|++++|++++..| ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 34678888888888887 5664 77888888888888888754 33 8888888888888888885444 888888888
Q ss_pred EEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhcccccc
Q 043316 250 LYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329 (1031)
Q Consensus 250 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 329 (1031)
|++++|.+++..+ +.++++|++|++++|++++ ++ .+..+++|+.|+++ |.+.+.. .+.++++|++|++++|.+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 8888888877543 7788888888888888774 33 47777888888875 4444322 155555555555555555
Q ss_pred CCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhc
Q 043316 330 DGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSF 409 (1031)
Q Consensus 330 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 409 (1031)
.+. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|+.|++++|++.+.
T Consensus 190 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~----- 258 (466)
T 1o6v_A 190 SDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNL----- 258 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC-----
T ss_pred CCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccc-----
Confidence 532 224555555555555555554433 44455555555555555432 2344444444444444444433
Q ss_pred cCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcE
Q 043316 410 RNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQV 489 (1031)
Q Consensus 410 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~ 489 (1031)
.+ +..+++|+.|++++|+++++.. +..+++|+.
T Consensus 259 -------------------~~--~~~l~~L~~L~l~~n~l~~~~~--------------------------~~~l~~L~~ 291 (466)
T 1o6v_A 259 -------------------AP--LSGLTKLTELKLGANQISNISP--------------------------LAGLTALTN 291 (466)
T ss_dssp -------------------GG--GTTCTTCSEEECCSSCCCCCGG--------------------------GTTCTTCSE
T ss_pred -------------------hh--hhcCCCCCEEECCCCccCcccc--------------------------ccCCCccCe
Confidence 22 3444444444444444433221 233334444
Q ss_pred EEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCccc
Q 043316 490 LDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQF 569 (1031)
Q Consensus 490 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 569 (1031)
|++++|++.+..+ +..+++|+.|++++|++++..| +..+++|++|++++|++++. ..+..+++|++|++++|++
T Consensus 292 L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred EEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCcc
Confidence 4444444443222 3444444444444444443332 34444444444444444432 2344444444444444444
Q ss_pred CCCCchhhccccccCceeccCcccC
Q 043316 570 NHKIPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 570 ~~~~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
++..| +..+++|+.|++++|.++
T Consensus 366 ~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 366 SDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp CBCGG--GTTCTTCCEEECCCEEEE
T ss_pred Cccch--hhcCCCCCEEeccCCccc
Confidence 44433 444444555555555444
No 98
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=9.9e-39 Score=359.58 Aligned_cols=247 Identities=22% Similarity=0.274 Sum_probs=206.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++.+.... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc-cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 6799999999999999999965 47999999999765432 234567889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++.+++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999998643 488999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~---~~i~~~-~~~~p~~---- 260 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIY---EKIVSG-KVRFPSH---- 260 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHC-CCCCCTT----
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHH---HHHHcC-CCCCCCC----
Confidence 2 2456799999999999998999999999999999999999999864432 1111 111111 1112211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPT-----MKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 1027 (1031)
....+.+++.+||+.||++||+ ++|+++
T Consensus 261 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1235778999999999999998 888764
No 99
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.1e-39 Score=360.81 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=181.5
Q ss_pred cceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEEEec
Q 043316 764 KYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
.+.||+|+||.||+|.. .+++.||||++... ....+.+|+.+++.+. ||||+++++++.++...++||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc
Confidence 47899999999999965 57899999998653 3456779999999997 999999999999999999999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEEeccccccccCCC
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~ 918 (1031)
++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||+++.....
T Consensus 89 ~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 89 NGGELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CSCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 9999999998653 589999999999999999999999 999999999999998766 7999999999876655
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc--hhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF--SSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
........+|+.|+|||++.+..++.++||||+||++|||++|+.||....... ......... ............
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~ 239 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK---IKKGDFSFEGEA 239 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH---HTTTCCCCCSHH
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH---HHcCCCCCCccc
Confidence 444566778999999999999999999999999999999999999987544321 111111111 122222222222
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 2233456889999999999999999998864
No 100
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-39 Score=365.95 Aligned_cols=256 Identities=24% Similarity=0.367 Sum_probs=209.0
Q ss_pred hccCccceeecCCCccEEEEEe--------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
++|.+.+.||+|+||.||+|+. .++..||||+++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 6799999999999999999964 234689999997653 233467899999999999 8999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+++..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 99999999999999999999976432 23589999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||......
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-- 300 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-- 300 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999999999987654322 2234556889999999999999999999999999999999 99998654321
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+........+.. ...++.+++.+||+.||++|||++|+++.|++
T Consensus 301 ---~~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 349 (382)
T 3tt0_A 301 ---ELFKLLKEGHRMDKPSN------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349 (382)
T ss_dssp ---HHHHHHHTTCCCCCCSS------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---HHHHHHHcCCCCCCCcc------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11222222222222211 12357789999999999999999999999863
No 101
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-38 Score=355.60 Aligned_cols=257 Identities=22% Similarity=0.358 Sum_probs=208.9
Q ss_pred HhccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 36799999999999999999964 345899999997543 233467889999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc---------------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCC
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA---------------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGD 890 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 890 (1031)
+..++||||+++++|.+++..... ...+++.+++.++.||+.||+|||++ +|+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccc
Confidence 999999999999999999976432 13478999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCC
Q 043316 891 ISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDY 967 (1031)
Q Consensus 891 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~ 967 (1031)
|||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||+||++|||++ |+.||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999876543321 233456788999999998889999999999999999999 9999875
Q ss_pred cCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.... .. ...+........+.. ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 256 ~~~~--~~---~~~~~~~~~~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 256 IPPE--RL---FNLLKTGHRMERPDN------CSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp CCGG--GH---HHHHHTTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCHH--HH---HHHhhcCCcCCCCcc------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 4432 11 111222111222211 12357789999999999999999999999863
No 102
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=364.69 Aligned_cols=255 Identities=24% Similarity=0.364 Sum_probs=204.9
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|++.+.||+|+||+||+|.. .+++.||||+++.... ......+.+|+.++++++||||+++++++.+.+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS---EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 6789999999999999999974 2467899999965332 234567899999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCC----ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceE
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA----AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAH 905 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~k 905 (1031)
..++||||+++|+|.++++... ....+++.+++.++.||+.||+|||++ ||+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999997643 123588999999999999999999999 999999999999999655 499
Q ss_pred EeccccccccCCCC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHh
Q 043316 906 VSDFGIAKFLNPHS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
|+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... . ....+
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~---~~~~i 299 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E---VLEFV 299 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H---HHHHH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHH
Confidence 99999998543221 22334567899999999999999999999999999999998 99998654331 1 11222
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
........+.. ....+.+++.+||+.||++|||+.||++.|+
T Consensus 300 ~~~~~~~~~~~------~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 300 TSGGRMDPPKN------CPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HTTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HcCCCCCCCcc------CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 22111111111 1225778999999999999999999999886
No 103
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=354.98 Aligned_cols=251 Identities=25% Similarity=0.406 Sum_probs=197.7
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|+. .++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence 5789999999999999999987 5789999998653 246788999999999999999999999874 479999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-eEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-AHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++........+++..++.++.|+++||+|||+.+..||+||||||+||+++.++. +||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999987665556788999999999999999999932229999999999999998886 79999999986543
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||+........... .......+.... .
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~---~- 228 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW---AVHNGTRPPLIK---N- 228 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH---HHHTTCCCCCBT---T-
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH---HHhcCCCCCccc---c-
Confidence 2 23456899999999999989999999999999999999999998754432211111 111111111111 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||++|+++.|+
T Consensus 229 --~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 229 --LPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp --CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1235778899999999999999999999886
No 104
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-39 Score=361.95 Aligned_cols=258 Identities=22% Similarity=0.381 Sum_probs=208.2
Q ss_pred HHhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 830 (1031)
..++|++.+.||+|+||.||+|+.. +++.||||+++... .....+.+.+|+.++++++||||+++++++.+
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3578999999999999999999663 45899999997643 22346789999999999999999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCc---------------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeC
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAA---------------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHG 889 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 889 (1031)
++..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ ||+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 9999999999999999999976421 14689999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCceEEeccccccccCCCC--CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCC
Q 043316 890 DISSKNVLLDSEHEAHVSDFGIAKFLNPHS--SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRD 966 (1031)
Q Consensus 890 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~ 966 (1031)
||||+||+++.++.+||+|||+++...... .......+|+.|+|||++.+..++.++||||+||++|||+| |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 999999999999999999999998654322 12234567899999999998899999999999999999999 999986
Q ss_pred CcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 967 YVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..... . ....+........+. . ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 279 ~~~~~--~---~~~~~~~~~~~~~~~---~---~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~ 332 (343)
T 1luf_A 279 GMAHE--E---VIYYVRDGNILACPE---N---CPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332 (343)
T ss_dssp TSCHH--H---HHHHHHTTCCCCCCT---T---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCChH--H---HHHHHhCCCcCCCCC---C---CCHHHHHHHHHHcccCcccCCCHHHHHHHHHH
Confidence 54321 1 111111111111111 1 12367789999999999999999999999863
No 105
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.4e-39 Score=353.78 Aligned_cols=258 Identities=22% Similarity=0.349 Sum_probs=201.5
Q ss_pred hccCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--A 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~ 831 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 6799999999999999999973 368999999987542 2346788999999999999999999999855 3
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 56899999999999999997653 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-----------hhh
Q 043316 912 AKFLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-----------FSN 977 (1031)
Q Consensus 912 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-----------~~~ 977 (1031)
+........ ......++..|+|||++.+..++.++||||+|+++|||+||..||......... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987654322 122345677899999999999999999999999999999999997643321100 001
Q ss_pred hHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 978 MITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.............+. .....+.+++.+||+.||++|||++|+++.|++
T Consensus 241 ~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 241 LIELLKNNGRLPRPD------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHHHHTTCCCCCCT------TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhccCcCCCCc------CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 111111111111111 112367889999999999999999999999863
No 106
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.5e-39 Score=363.03 Aligned_cols=254 Identities=14% Similarity=0.170 Sum_probs=204.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++++ +||||+++++++.+++..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS------RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC------SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc------chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 5789999999999999999964 679999999986542 233578999999999 89999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-----eEEecccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-----AHVSDFGI 911 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~ 911 (1031)
||||+ +++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 899999998642 3689999999999999999999999 9999999999999999887 99999999
Q ss_pred ccccCCCCCC-------ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc-hhhhhhHHHhh
Q 043316 912 AKFLNPHSSN-------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF-SSFSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~-~~~~~~~~~~~ 983 (1031)
++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+....
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~ 236 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK 236 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhh
Confidence 9876443221 245679999999999999999999999999999999999999987654321 11111111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.... .....+...++.+++..||+.||.+||++++|.+.|+
T Consensus 237 ~~~~------~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 237 RATP------IEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHSC------HHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred ccCC------HHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 1110 0100011126888999999999999999999999875
No 107
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=363.72 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=205.4
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ..+...+.+|+.++++++||||+++++++.+.+..++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 36799999999999999999955 578999999986543 2235678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC--CCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS--EHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~ 914 (1031)
||||+++|+|.+++.... ..+++.++..++.||+.||+|||+. ||+||||||+||+++. ++.+||+|||++..
T Consensus 126 v~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp EEECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EEEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccccee
Confidence 999999999999997643 3588999999999999999999999 9999999999999984 46799999999997
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+...
T Consensus 201 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~i~~~~~~~~~~~---- 273 (387)
T 1kob_A 201 LNPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQNVKRCDWEFDEDA---- 273 (387)
T ss_dssp CCTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHCCCCCCSST----
T ss_pred cCCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCCCccc----
Confidence 7543 3345567999999999999989999999999999999999999998754321 11111111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......++.+++.+||+.||++|||+.|+++
T Consensus 274 --~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 274 --FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp --TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred --cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1112236778999999999999999999986
No 108
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.2e-39 Score=364.37 Aligned_cols=250 Identities=25% Similarity=0.313 Sum_probs=195.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHH-HhcCCCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLA-LTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||++++..... ....+.+.+|..+ ++.++||||+++++++.+.+..|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 46899999999999999999965 468999999997755322 2334566777776 57789999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++..
T Consensus 116 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999999997643 478899999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++..
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~---~~i~~~-~~~~~~~-- 261 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMY---DNILNK-PLQLKPN-- 261 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHH---HHHHHS-CCCCCSS--
T ss_pred ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHH---HHHHhc-ccCCCCC--
Confidence 4444445667899999999999999999999999999999999999999864432 1111 111111 1112211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVC 1026 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 1026 (1031)
....+.+++.+||+.||++||++.+..
T Consensus 262 ----~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 262 ----ITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred ----CCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 112567889999999999999985433
No 109
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6e-39 Score=357.24 Aligned_cols=257 Identities=22% Similarity=0.384 Sum_probs=209.1
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~ 831 (1031)
++|++.+.||+|+||.||+|.. .+++.||||+++.... ....+.+.+|+.+++++ +||||+++++++.++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh---HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 6799999999999999999964 3578999999976432 23467899999999999 899999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCc---------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAA---------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ ||+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 999999999999999999976532 12489999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||++......... .....+++.|+|||++.+..++.++||||+|+++|||+| |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 9999999999999999877544322 223456789999999999899999999999999999999 9999875543211
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.... .........+.. ....+.+++.+||+.||.+|||+.|+++.|++
T Consensus 257 -~~~~---~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 257 -FYKM---IKEGFRMLSPEH------APAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp -HHHH---HHHTCCCCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -HHHH---hccCCCCCCccc------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 1111 111111111111 12367889999999999999999999999874
No 110
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.7e-38 Score=347.26 Aligned_cols=255 Identities=29% Similarity=0.438 Sum_probs=203.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhh---hcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEM---ADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||+||+|+. .+++.||||++.......+. ...+.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5789999999999999999965 57999999998654322211 12278899999999999999999999997665
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCCCCc-----eEEe
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDSEHE-----AHVS 907 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~kl~ 907 (1031)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ + |+||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 69999999999998886543 3589999999999999999999999 8 999999999999998876 9999
Q ss_pred ccccccccCCCCCCceeeccccCcccccccc--ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAH--MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
|||+++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||............... ...
T Consensus 172 Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--~~~ 246 (287)
T 4f0f_A 172 DFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EEG 246 (287)
T ss_dssp CCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH--HSC
T ss_pred CCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh--ccC
Confidence 9999985432 345567899999999984 455788999999999999999999998755443222121111 111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.. ....+.+++.+||+.||++|||++|+++.|++
T Consensus 247 ~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 247 LRPTIPED------CPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CCCCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCCCCCcc------cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 22222211 12367889999999999999999999999975
No 111
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.9e-40 Score=363.53 Aligned_cols=257 Identities=24% Similarity=0.354 Sum_probs=187.9
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhc--CCCCceeeeeeeEecCC----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE--IRHRNIIKFHGFCSNAQ---- 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~~~~~~~~---- 832 (1031)
++|.+.+.||+|+||.||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++.+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T-------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc-------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 5799999999999999999987 5899999998653 34567778888877 78999999999998776
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhh--------hCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH--------HDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
..++||||+++|+|.++++.. .+++.++..++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 789999999999999999653 4778899999999999999999 77 99999999999999999999
Q ss_pred EEeccccccccCCCCCC----ceeeccccCcccccccccc------CCCccccchhhhHHHHHHHhC----------CCC
Q 043316 905 HVSDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMM------RATEKYDVHSFGVLALEVIKG----------NHP 964 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltG----------~~P 964 (1031)
||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 99999999876543322 2334789999999998776 445789999999999999999 566
Q ss_pred CCCcCccchhhhhhHHHhh-hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 965 RDYVSTNFSSFSNMITEIN-QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
|.................. ....+..+.. ....+....+.+++.+||+.||++|||++|+++.|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 294 (303)
T 3gxj_A 228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp TTTTCC-CCCCC-CHHHHTTSCCCCCCCGG-GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC
T ss_pred ccccCCCCccHHHHHHHHHHhhcCCCcccc-ccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 5433222222222222111 1112222211 1112444578899999999999999999999999974
No 112
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.2e-39 Score=356.47 Aligned_cols=262 Identities=19% Similarity=0.312 Sum_probs=191.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS---EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS---TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc---ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence 35789999999999999999965 468999999986543 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCC---ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDA---AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
||||++ ++|.+++.... ....+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccce
Confidence 999998 59999886432 123588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh--------
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ-------- 984 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~-------- 984 (1031)
.............+|+.|+|||++.+. .++.++||||+||++|||++|+.||....... ...........
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPS 235 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGG
T ss_pred ecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhh
Confidence 876544445566789999999998764 58999999999999999999999987554321 11111110000
Q ss_pred -----hcCCCC----CCCChhHH------HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 -----NLDHRL----PTPSRDVM------DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 -----~~~~~~----~~~~~~~~------~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...... +....... .....+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000 00000000 11236789999999999999999999875
No 113
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-38 Score=360.08 Aligned_cols=262 Identities=23% Similarity=0.236 Sum_probs=202.9
Q ss_pred HHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh-hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 755 IKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 755 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
....++|++.+.||+|+||.||+|.. .+++.||+|++....... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 44567899999999999999999955 578999999987654321 2345678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc-------------------------------------cccCCHHHHHHHHHHHHHHH
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA-------------------------------------AKEFGWNQRMNVIKGVANAL 875 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~i~~~L 875 (1031)
..++||||+++|+|.+++..... ...+++..++.++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999863110 11235678889999999999
Q ss_pred HHhhhCCCCCeeeCCCCCCCeeeCCCC--ceEEeccccccccCCCCC----CceeeccccCccccccccc--cCCCcccc
Q 043316 876 SYLHHDCLPPIVHGDISSKNVLLDSEH--EAHVSDFGIAKFLNPHSS----NWTAFAGTFGYAAPEIAHM--MRATEKYD 947 (1031)
Q Consensus 876 ~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~sD 947 (1031)
+|||+. +|+||||||+||+++.++ .+||+|||++..+..... ......||+.|+|||++.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998777 899999999986543221 2345678999999999875 67889999
Q ss_pred chhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 948 VHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 948 vwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
|||+||++|||++|+.||....... ....... ................+.+++.+||+.||++|||+.|+++
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDAD-----TISQVLN---KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHHHH---CCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCChHH-----HHHHHHh---cccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 9999999999999999986544321 1111111 1111111111112346788999999999999999999986
No 114
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=9.2e-39 Score=360.59 Aligned_cols=250 Identities=22% Similarity=0.309 Sum_probs=188.5
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 367999999999999999999664 68899999987542 34567899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~ 913 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 999999999999997643 488999999999999999999999 9999999999999975 8899999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.........+. .+.........+.
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----~i~~~~~~~~~~~ 274 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFR----RILNCEYYFISPW 274 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHH----HHHTTCCCCCTTT
T ss_pred ccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHH----HHHhCCCccCCch
Confidence 76432 223456789999999999998999999999999999999999999865443211111 1111111111110
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++.+||+.||++|||+.|+++
T Consensus 275 ---~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 275 ---WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ---TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---hhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1112236778999999999999999999986
No 115
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=348.64 Aligned_cols=252 Identities=24% Similarity=0.394 Sum_probs=185.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... .+....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-YKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhh-hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 46899999999999999999965 5799999999976542 223346789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999997642 3588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........|++.|+|||++.+..++.++||||+|+++|||++|+.||....... ....... .+...+..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~-~~~~~~~~--- 234 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLNKVVL-ADYEMPSF--- 234 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCS-SCCCCCTT---
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHHHHhh-cccCCccc---
Confidence 44433445678999999999998889999999999999999999999987543311 0111000 01111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 235 ---~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 235 ---LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1235778999999999999999999975
No 116
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.7e-39 Score=373.73 Aligned_cols=253 Identities=22% Similarity=0.415 Sum_probs=207.4
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|.+.+.||+|+||.||+|...++..||||+++... ...+.|.+|+.++++++||||+++++++. .+..++|
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 46789999999999999999998888999999997643 35778999999999999999999999986 5678999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.++++... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 261 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp ECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 99999999999997643 23578899999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ......++..|+|||++.++.++.++|||||||++|||+| |+.||...... . ....+........+.
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~---~~~~i~~~~~~~~~~--- 408 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--E---VIRALERGYRMPRPE--- 408 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H---HHHHHHHTCCCCCCT---
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCC---
Confidence 211 1223446788999999998899999999999999999999 99998754331 1 112222221111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||+.||++|||+++|++.|+.
T Consensus 409 ---~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~ 441 (454)
T 1qcf_A 409 ---NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441 (454)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 112367789999999999999999999999874
No 117
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.1e-39 Score=370.40 Aligned_cols=264 Identities=21% Similarity=0.266 Sum_probs=208.2
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS 829 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~ 829 (1031)
+.++....++|++.++||+|+||+||+|+.. +++.||||++++..... ....+.+.+|+.++..++||||+++++++.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-RAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 3444445689999999999999999999664 58899999997643322 223445889999999999999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
+++..|+||||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++++||+||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 9999999999999999999997632 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC-ceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 910 GIAKFLNPHSSN-WTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 910 g~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
|+|+........ ....+||+.|+|||++. ++.++.++||||+||++|||++|+.||...... ..+........
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~ 298 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHKE 298 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHHhhhhccc
Confidence 999876543322 23467999999999987 456899999999999999999999998654321 11111111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCC--CCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEA--RPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 1027 (1031)
. ..++..... ....+.+++.+|+..+|++ ||+++|+++
T Consensus 299 ~---~~~p~~~~~---~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 299 R---FQFPTQVTD---VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp H---CCCCSSCCC---SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred c---ccCCccccc---CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1 111111111 1225678899999998888 999999875
No 118
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-39 Score=360.93 Aligned_cols=257 Identities=22% Similarity=0.356 Sum_probs=206.1
Q ss_pred HhccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~ 830 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++.+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 47899999999999999999964 246789999997543 223457889999999999 89999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCcc--------------------ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCC
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAA--------------------KEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGD 890 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 890 (1031)
.+..++||||+++|+|.+++...... ..+++.+++.++.||+.||+|||++ ||+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999999999765321 2478999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCC
Q 043316 891 ISSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDY 967 (1031)
Q Consensus 891 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~ 967 (1031)
|||+||+++.++.+||+|||++......... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876543322 233557889999999998899999999999999999998 9999875
Q ss_pred cCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..... .... ..........+.. ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 278 ~~~~~-~~~~---~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 278 IPVDA-NFYK---LIQNGFKMDQPFY------ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CCCSH-HHHH---HHHTTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCcHH-HHHH---HHhcCCCCCCCCC------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 54321 1111 1111111111111 1236778999999999999999999999886
No 119
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=361.91 Aligned_cols=249 Identities=22% Similarity=0.317 Sum_probs=197.2
Q ss_pred cCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e 839 (1031)
|...+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E 166 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVME 166 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 34467899999999999965 579999999987643 2346788999999999999999999999999999999999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee--CCCCceEEeccccccccCC
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL--DSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|+++++|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 167 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 167 YVDGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp CCTTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred CCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 999999999886542 3588999999999999999999999 99999999999999 5678999999999997754
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+... .........
T Consensus 242 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~---~~~~i~~~---~~~~~~~~~ 312 (373)
T 2x4f_A 242 R-EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--E---TLNNILAC---RWDLEDEEF 312 (373)
T ss_dssp T-CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHHT---CCCSCSGGG
T ss_pred c-cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--H---HHHHHHhc---cCCCChhhh
Confidence 3 2334557999999999999888999999999999999999999998654331 1 11111111 111111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.+++.+||+.||.+|||++|+++
T Consensus 313 ~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 313 QDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 122346788999999999999999999986
No 120
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-38 Score=368.08 Aligned_cols=249 Identities=24% Similarity=0.341 Sum_probs=206.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|+. .+|+.||||++..... ......+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 6799999999999999999965 4799999999976542 2233467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.+++.... .+++.+++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999997643 589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+..... .....+..... ..+. .
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~~~i~~~~~-~~p~---~ 238 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLFKKICDGIF-YTPQ---Y 238 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHHHHHHTTCC-CCCT---T
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHHHHHhcCCc-CCCc---c
Confidence 3 33455679999999999988765 78999999999999999999998754321 11122211111 1111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 239 ---~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 239 ---LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ---CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1125778999999999999999999985
No 121
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-38 Score=354.05 Aligned_cols=264 Identities=23% Similarity=0.362 Sum_probs=200.5
Q ss_pred HHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC--CCCceeeeeeeEecC-
Q 043316 755 IKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI--RHRNIIKFHGFCSNA- 831 (1031)
Q Consensus 755 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l--~h~niv~l~~~~~~~- 831 (1031)
....++|++.+.||+|+||.||+|+. .++.||||++... ....+.+|.+++... +||||+++++++.+.
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 34457899999999999999999987 4899999998543 233445565665554 899999999999877
Q ss_pred ---CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC-----CCCeeeCCCCCCCeeeCCCCc
Q 043316 832 ---QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC-----LPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 832 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
...++||||+++|+|.++++.. .+++.+++.++.|++.||+|||+.+ .++|+||||||+||+++.++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 7889999999999999999654 4889999999999999999999752 338999999999999999999
Q ss_pred eEEeccccccccCCCCCC----ceeeccccCccccccccccCCCcc------ccchhhhHHHHHHHhC----------CC
Q 043316 904 AHVSDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMMRATEK------YDVHSFGVLALEVIKG----------NH 963 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------sDvwslG~il~elltG----------~~ 963 (1031)
+||+|||+++.+...... .....||+.|+|||++.+.....+ +|||||||++|||+|| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 999999999876443222 124578999999999987766554 9999999999999999 56
Q ss_pred CCCCcCccchhhhhhHHHhh-hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 964 PRDYVSTNFSSFSNMITEIN-QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 964 P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
||.................. ....+..+. .........++.+++.+||+.||++|||+.|+++.|++
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPN-RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cHhhhcCCCCchhhhHHHHhhhccCccccc-cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 65443332222222222111 111111111 11112445678899999999999999999999999863
No 122
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.1e-39 Score=367.01 Aligned_cols=259 Identities=19% Similarity=0.250 Sum_probs=206.4
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
++....++|++.++||+|+||+||+|+. .+++.||+|++++..... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3334467899999999999999999965 468999999997644322 23345688999999999999999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
+..|+||||+++|+|.++++.. .+++..+..++.||+.||+|||++ ||+||||||+||+++.++++||+|||+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 9999999999999999999753 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-CceeeccccCccccccccccC----CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 912 AKFLNPHSS-NWTAFAGTFGYAAPEIAHMMR----ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 912 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
++....... .....+||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ......+.....
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~-- 290 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSKIMNHKN-- 290 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTHHH--
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--hhHHHHHHhccc--
Confidence 987654322 223567999999999998655 78999999999999999999999864432 111111111111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhccCCCCC--CCCHHHHHH
Q 043316 987 DHRLPTPSRDVMDKLMSIMEVAILCLVESPEA--RPTMKKVCN 1027 (1031)
Q Consensus 987 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 1027 (1031)
....+... .....+.++|.+|++.+|++ ||+++||++
T Consensus 291 ~~~~p~~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 291 SLTFPDDN----DISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HCCCCTTC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred cccCCCcc----cccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 11111110 01235678899999999999 999999975
No 123
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.4e-38 Score=358.66 Aligned_cols=252 Identities=23% Similarity=0.287 Sum_probs=192.7
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-----AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-----TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-----cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 367999999999999999999654 79999999986543 234567899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc--eEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE--AHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 914 (1031)
||||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+++.
T Consensus 94 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 94 IMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 999999999999997543 589999999999999999999999 9999999999999987765 99999999985
Q ss_pred cCCCCCCceeeccccCccccccccccCCCcc-ccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEK-YDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.... .......||+.|+|||++.+..+..+ +||||+||++|||++|+.||....... .+......+... ....+..
T Consensus 168 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 244 (361)
T 3uc3_A 168 SVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSV-KYSIPDD 244 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTT-CCCCCTT
T ss_pred cccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcC-CCCCCCc
Confidence 4322 22345679999999999988777655 899999999999999999987544321 112222222111 1111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. .....+.+++.+||+.||++|||+.|+++
T Consensus 245 ~----~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 245 I----RISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp S----CCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred C----CCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 0 11235778999999999999999999975
No 124
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.3e-38 Score=346.64 Aligned_cols=251 Identities=19% Similarity=0.289 Sum_probs=203.8
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--CeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA--QHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~~l 836 (1031)
++|.+.+.||+|+||.||+|+. +++.||||++..... .....+.+.+|+.++++++||||+++++++.+. +..++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDW--STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTC--CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 6789999999999999999987 589999999976532 223467799999999999999999999999887 78899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999998653 23589999999999999999999998 8 99999999999999999999999998765
Q ss_pred cCCCCCCceeeccccCccccccccccCCCc---cccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATE---KYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
... ....+|+.|+|||++.+..++. ++||||+||++|||++|+.||........ .............+
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~ 233 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----GMKVALEGLRPTIP 233 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----HHHHHHSCCCCCCC
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----HHHHHhcCCCCCCC
Confidence 432 2346799999999998765544 79999999999999999999875443211 11111111122222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. ....+.+++.+||+.||++|||++|+++.|++
T Consensus 234 ~~------~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 234 PG------ISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp TT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11 12357788999999999999999999999863
No 125
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.1e-38 Score=368.75 Aligned_cols=248 Identities=26% Similarity=0.419 Sum_probs=203.3
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-eeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ-HSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~-~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .++.||||+++... ..+.|.+|+.++++++||||+++++++.+.. ..++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 46789999999999999999987 47899999987642 4567999999999999999999999987654 7899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.++++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 265 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999998653 23468899999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. .....++..|+|||++.+..++.++|||||||++|||+| |+.||...... . ....+........+..
T Consensus 341 ~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~---~~~~i~~~~~~~~p~~-- 410 (450)
T 1k9a_A 341 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--D---VVPRVEKGYKMDAPDG-- 410 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--T---HHHHHHTTCCCCCCTT--
T ss_pred cc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCCc--
Confidence 22 223467889999999999999999999999999999998 99998755432 1 1122222222222211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||+.|+++.|+
T Consensus 411 ----~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 411 ----CPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1236778899999999999999999999886
No 126
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.6e-38 Score=375.44 Aligned_cols=254 Identities=22% Similarity=0.416 Sum_probs=208.9
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
..+|++.+.||+|+||.||+|.+. +++.||||+++... ...+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 367899999999999999999765 48899999997543 346789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.++++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 999999999999997643 24588999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 917 PHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 917 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... ......++..|+|||++.+..++.++|||||||++|||+| |+.||...... . ....+........+..
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~---~~~~~~~~~~~~~~~~- 443 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--Q---VYELLEKDYRMERPEG- 443 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G---HHHHHHTTCCCCCCTT-
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCCC-
Confidence 3221 1123345778999999998899999999999999999999 99998755432 1 1122222222221211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+.+++.+||+.||++|||+.||++.|++
T Consensus 444 -----~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 444 -----CPEKVYELMRACWQWNPSDRPSFAEIHQAFET 475 (495)
T ss_dssp -----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 12357788999999999999999999999874
No 127
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=364.22 Aligned_cols=264 Identities=20% Similarity=0.293 Sum_probs=209.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC--eeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ--HSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--~~~ 835 (1031)
++|.+.++||+|+||+||+|.. .+++.||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 5789999999999999999965 4699999999976432 234677889999999999999999999998755 779
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee----CCCCceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL----DSEHEAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~ 911 (1031)
+||||+++|+|.++++.......+++.+++.++.||+.||+|||+. ||+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999998765445589999999999999999999999 99999999999999 7788899999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc--------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM--------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... ......+.
T Consensus 163 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~~ 240 (396)
T 4eut_A 163 ARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKII 240 (396)
T ss_dssp CEECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-HHHHHHHH
T ss_pred ceEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-HHHHHHHh
Confidence 9876543 23345678999999999865 56788999999999999999999998643322111 11111111
Q ss_pred hhcC------------------CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLD------------------HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...+ ...+............+.+++.+||+.||++||+++|+++.++
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 1111 1112222222344457889999999999999999999998775
No 128
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3e-38 Score=345.35 Aligned_cols=249 Identities=28% Similarity=0.447 Sum_probs=202.5
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ......+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecccc-chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 47899999999999999999954 5678999999866542 223446778999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999999997643 488899999999999999999999 99999999999999999999999999987543
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... ... ..+.. .....+..
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~---~~~~~-~~~~~~~~--- 229 (279)
T 3fdn_A 161 SS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETY---KRISR-VEFTFPDF--- 229 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHH---HHHHH-TCCCCCTT---
T ss_pred cc--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHH---HHHHh-CCCCCCCc---
Confidence 22 234567899999999999988999999999999999999999998644321 111 11111 11112211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 230 ---~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 230 ---VTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp ---SCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ---CCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1125678899999999999999999986
No 129
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.8e-38 Score=355.01 Aligned_cols=258 Identities=21% Similarity=0.342 Sum_probs=191.7
Q ss_pred HhccCccceeecCCCccEEEEEeCC-C---cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPS-G---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.+.||+|+||.||+|.... + ..||||+++.... .....+.+.+|++++++++||||+++++++.....
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 3579999999999999999997643 3 2899999976532 22346789999999999999999999999987765
Q ss_pred e------EEEEEeccCCCchhhcccCCc---cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 834 S------FIVSEYLDRGSLTTILKDDAA---AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 834 ~------~lv~e~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
. ++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 999999999999999965321 12588999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHH
Q 043316 905 HVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~ 981 (1031)
||+|||+++....... ......+++.|+|||.+.+..++.++||||+||++|||++ |+.||...... . ....
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~---~~~~ 251 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--E---IYNY 251 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G---HHHH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--H---HHHH
Confidence 9999999987644322 1234456789999999999899999999999999999999 99998754432 1 1111
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.........+.. ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 252 ~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 295 (323)
T 3qup_A 252 LIGGNRLKQPPE------CMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295 (323)
T ss_dssp HHTTCCCCCCTT------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HhcCCCCCCCCc------cCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111111111 12357889999999999999999999998863
No 130
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.8e-38 Score=372.46 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=206.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|+. .+|+.||||++.+.... .....+.+.+|+.++++++||||+++++++.+....|+|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 6789999999999999999966 47999999999765432 234567889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 838 SEYLDRGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
|||+++|+|.+++..... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.+|++||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999876432 34589999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......+... ...++..
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~~i~~~-~~~~p~~--- 415 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRVLEQ-AVTYPDK--- 415 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHHHHHHC-CCCCCTT---
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHHHHhhc-ccCCCcc---
Confidence 544444556899999999999998999999999999999999999999875432111 11111111111 1122211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTM 1022 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~ 1022 (1031)
....+.+++.+||+.||++||++
T Consensus 416 ---~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 416 ---FSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ---cCHHHHHHHHHhccCCHhHCCCC
Confidence 12356788999999999999975
No 131
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.9e-38 Score=352.85 Aligned_cols=255 Identities=20% Similarity=0.287 Sum_probs=207.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 46799999999999999999965 4799999999976443221 12467899999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEeccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFG 910 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg 910 (1031)
++||||+++++|.+++.... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999997643 478899999999999999999999 999999999999999888 79999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... . ....+.. ...
T Consensus 165 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~---~~~~i~~---~~~ 235 (321)
T 2a2a_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--E---TLANITS---VSY 235 (321)
T ss_dssp TCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--H---HHHHHHT---TCC
T ss_pred cceecCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--H---HHHHHHh---ccc
Confidence 99876543 2334567899999999999889999999999999999999999998644321 1 1111111 111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111111112236788999999999999999999986
No 132
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.8e-38 Score=344.81 Aligned_cols=252 Identities=23% Similarity=0.422 Sum_probs=208.0
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 5789999999999999999988889999999997643 23567899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999997643 3578999999999999999999999 9999999999999999999999999999876432
Q ss_pred C-CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 S-SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......++..|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+........+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~--- 229 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDISTGFRLYKPRL--- 229 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCCCCTT---
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-----HHHHHHhcCCcCCCCcc---
Confidence 1 11223456788999999998899999999999999999999 89998654321 11122222212111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+.+++.+||+.||++|||++|+++.|++
T Consensus 230 ---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 230 ---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261 (267)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 12357789999999999999999999999863
No 133
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.6e-38 Score=355.66 Aligned_cols=252 Identities=21% Similarity=0.404 Sum_probs=197.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCc----EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGI----IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
++|++.+.||+|+||+||+|.+ .+++ +||+|++.... .....+.+.+|+.++++++||||+++++++.++.
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 5799999999999999999964 3444 46888875432 2345678999999999999999999999998765
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 789999999999999997653 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
........ .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||+..... .....+. .......
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~---~~~~~~~ 240 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE---KGERLPQ 240 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH---TTCCCCC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHH---cCCCCCC
Confidence 76543322 234456889999999999999999999999999999999 99998755432 1111111 1111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~------~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 241 PPI------CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CTT------BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred Ccc------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111 1235778999999999999999999999885
No 134
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.6e-38 Score=346.20 Aligned_cols=253 Identities=23% Similarity=0.382 Sum_probs=193.6
Q ss_pred HhccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.+.||+|+||.||+|... .+..||+|++.... .....+.+.+|+.++++++||||+++++++. ++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 367999999999999999999653 24579999986542 2234678999999999999999999999985 467
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 899999999999999997543 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 914 FLNPHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 914 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
....... ......+++.|+|||++.+..++.++||||+||++|||++ |..||...... .....+........+
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~~~i~~~~~~~~~ 239 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMP 239 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTCCCCCC
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHHHHHHcCCCCCCC
Confidence 7654322 1233456789999999998899999999999999999997 99998755432 111122111111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 240 ~~------~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 240 PN------CPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp TT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11 1235778899999999999999999999986
No 135
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9e-39 Score=373.53 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=196.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++...... .......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 47899999999999999999954 57999999999765321 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+ . ||+||||||+||+++.++.+||+|||+++..
T Consensus 226 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999997643 58899999999999999999998 7 9999999999999999999999999999875
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+.. ....++..
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~---~i~~-~~~~~p~~-- 371 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFE---LILM-EEIRFPRT-- 371 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH---HHHH-CCCCCCTT--
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHH---HHHh-CCCCCCcc--
Confidence 44444456678999999999999999999999999999999999999998644321 1111 1111 11112211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||++|| +++|+++
T Consensus 372 ----~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 372 ----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ----SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 113577899999999999999 9999875
No 136
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.1e-38 Score=354.75 Aligned_cols=256 Identities=23% Similarity=0.387 Sum_probs=206.5
Q ss_pred hccCccceeecCCCccEEEEEe--------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL--------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 829 (1031)
++|++.+.||+|+||.||+|+. .+++.||||+++... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 6899999999999999999975 356789999997643 223467889999999999 8999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
+.+..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+. ||+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 99999999999999999999976532 23488999999999999999999999 999999999999
Q ss_pred eeCCCCceEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccch
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFS 973 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~ 973 (1031)
+++.++.+||+|||++........ ......+++.|+|||++.+..++.++||||+||++|||++ |+.||......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 999999999999999987654322 1233456788999999988889999999999999999999 99998654321
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. ...+........+.. ....+.+++.+||+.||.+|||+.|+++.|++
T Consensus 267 ~~---~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 315 (334)
T 2pvf_A 267 EL---FKLLKEGHRMDKPAN------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315 (334)
T ss_dssp HH---HHHHHHTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH---HHHHhcCCCCCCCcc------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11 111222111122111 12357788999999999999999999999863
No 137
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=353.74 Aligned_cols=261 Identities=20% Similarity=0.273 Sum_probs=198.7
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED--DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL 79 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEE
Confidence 36799999999999999999965 4699999999866432 22346678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.++++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 80 v~e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 80 VFEYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp EEECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 999999999999887543 488999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh------------
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN------------ 983 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~------------ 983 (1031)
..........+|+.|+|||++.+ ..++.++||||+|+++|+|++|+.||......... ........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 154 GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL-YLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCSCCHHHHHHHHT
T ss_pred CcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhccccccccccccc
Confidence 54444556788999999999876 56799999999999999999999998755432111 10000000
Q ss_pred -hh-cCCCCCCCC--hh----HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 -QN-LDHRLPTPS--RD----VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 -~~-~~~~~~~~~--~~----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .....+... .. .......+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 000111000 00 0112235788999999999999999999985
No 138
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.2e-38 Score=363.85 Aligned_cols=264 Identities=18% Similarity=0.230 Sum_probs=203.8
Q ss_pred HhccCccceeecC--CCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 758 IDDFGEKYCIGKG--RQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
.++|++.++||+| +||.||+|+.. +++.||||++...... ....+.+.+|+.++++++||||+++++++.+++..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS--NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC--hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 3679999999999 99999999654 7999999999765432 23467788999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999999997653 23588999999999999999999999 999999999999999999999999999865
Q ss_pred cCCCC-------CCceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 915 LNPHS-------SNWTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 915 ~~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....................
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 42211 11223478899999999987 5789999999999999999999999875443221111100000000
Q ss_pred cCCC---------------------------CC-------CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHR---------------------------LP-------TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~---------------------------~~-------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+.. .+ ............+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0000 00 000000111235788999999999999999999975
No 139
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.3e-38 Score=373.55 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=209.4
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|+. .+|+.||||++.+.... .....+.+.+|+.++++++||||+++++++.+.+..|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 36799999999999999999965 57999999999765432 23456778999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++++||+|||+++...
T Consensus 262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999997653 23489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ..+..........++..
T Consensus 338 ~~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~--~~i~~~i~~~~~~~p~~--- 411 (576)
T 2acx_A 338 EG-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR--EEVERLVKEVPEEYSER--- 411 (576)
T ss_dssp TT-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH--HHHHHHHHHCCCCCCTT---
T ss_pred cC-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH--HHHHHHhhcccccCCcc---
Confidence 33 2335568999999999999988999999999999999999999998754432111 11111111122222211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARP-----TMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 1027 (1031)
....+.+++.+||+.||++|| +++|+++
T Consensus 412 ---~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 412 ---FSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ---CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 123677899999999999999 7888864
No 140
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3e-38 Score=351.11 Aligned_cols=262 Identities=23% Similarity=0.338 Sum_probs=197.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .+....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 46799999999999999999964 5799999999875332 123456788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||+++++|.+++.... ....+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999997532 234578999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
...........+++.|+|||++.+..++.++||||||+++|||++|+.||............ .......+.... .
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~--~ 261 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK---KIEQCDYPPLPS--D 261 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHH---HHHTTCSCCCCT--T
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHH---HhhcccCCCCcc--c
Confidence 54444444567899999999999989999999999999999999999998654332222221 111111111110 1
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.....+.+++.+||+.||++|||++|+++.|++
T Consensus 262 ---~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~ 294 (310)
T 2wqm_A 262 ---HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294 (310)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 112357788999999999999999999998863
No 141
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.7e-38 Score=344.22 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=204.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF----VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 46799999999999999999965 467899999987643 2356789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 999999999999987643 488999999999999999999999 99999999999999 788899999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......+|+.|+|||++.+ .++.++||||+|+++|||++|+.||...... . ....+.. .....+
T Consensus 158 ~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~---~~~~~~~---~~~~~~ 227 (277)
T 3f3z_A 158 RFKPG-KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--E---VMLKIRE---GTFTFP 227 (277)
T ss_dssp ECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--H---HHHHHHH---CCCCCC
T ss_pred eccCc-cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--H---HHHHHHh---CCCCCC
Confidence 76543 33455678999999999876 4899999999999999999999998754331 1 1111111 111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..........+.+++.+|++.||++|||+.|+++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111122346788999999999999999999875
No 142
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-38 Score=357.97 Aligned_cols=252 Identities=21% Similarity=0.274 Sum_probs=200.4
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++.+... ...+|++++.++ +||||+++++++.+++..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~ 91 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGKYV 91 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence 457899999999999999999965 4789999999966431 134688888777 799999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-C---ceEEeccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-H---EAHVSDFG 910 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~---~~kl~Dfg 910 (1031)
|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||++..+ + .+||+|||
T Consensus 92 ~lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 99999999999999997653 488999999999999999999999 99999999999998543 3 49999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++..............||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......+...... .
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~~~~~-~ 242 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEILARIGSGKFS-L 242 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHHHHHHHCCCC-C
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHHHHHccCCcc-c
Confidence 99977655444556788999999999988889999999999999999999999987533211 11111222111111 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+ ..........+.+++.+||+.||++|||+.|+++
T Consensus 243 ~--~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 243 S--GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp C--STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred C--ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 0001112235778999999999999999999875
No 143
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=358.33 Aligned_cols=265 Identities=17% Similarity=0.218 Sum_probs=199.5
Q ss_pred hccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhh--hh-----hhcHHHHHHHHHHHhcCCCCceeeeeee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLF--DE-----MADQDEFLNEVLALTEIRHRNIIKFHGF 827 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--~~-----~~~~~~~~~Ei~~l~~l~h~niv~l~~~ 827 (1031)
++|.+.+.||+|+||.||+|... ++..||||++...... .+ ......+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999764 5789999998654211 00 1123457789999999999999999999
Q ss_pred Eec----CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-
Q 043316 828 CSN----AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH- 902 (1031)
Q Consensus 828 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 902 (1031)
+.+ ....++||||+ +++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence 987 78899999999 999999998654 589999999999999999999999 999999999999999887
Q ss_pred -ceEEeccccccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh
Q 043316 903 -EAHVSDFGIAKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS 974 (1031)
Q Consensus 903 -~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~ 974 (1031)
.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 999999999987643211 124457899999999999988999999999999999999999998643332222
Q ss_pred hhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 975 FSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
............+........ ......++.+++.+||+.||++|||++||++.|++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 270 VQTAKTNLLDELPQSVLKWAP-SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp HHHHHHHHHHTTTHHHHHHSC-TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred HHHHHHhhcccccHHHHhhcc-ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 222222211111110000000 00112367889999999999999999999999874
No 144
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.9e-39 Score=358.25 Aligned_cols=254 Identities=23% Similarity=0.298 Sum_probs=195.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH---- 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~---- 833 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++..... .+....+.+.+|+.++++++||||+++++++.....
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 5799999999999999999964 6799999999976542 223446788999999999999999999999876543
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.|+||||+++++|.++++... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 499999999999999997643 588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .... ...
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~----~~~~----~~~ 236 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVR----EDP 236 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH----HHHH----CCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH----HHhc----CCC
Confidence 7654322 2234568999999999999899999999999999999999999986544321111 1110 111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............+.+++.+||+.||++||++.++++
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 237 IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 1100000112236788999999999999997776654
No 145
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=365.39 Aligned_cols=263 Identities=23% Similarity=0.259 Sum_probs=206.6
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS 829 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~ 829 (1031)
+++.....++|++.+.||+|+||+||+|+. .+++.||||++++..... ....+.+.+|+.++..++||||+++++++.
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~-~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK-RGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-HGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 334444568899999999999999999965 579999999997643221 223456889999999999999999999999
Q ss_pred cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecc
Q 043316 830 NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDF 909 (1031)
Q Consensus 830 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 909 (1031)
+.+..|+||||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++++||+||
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 9999999999999999999997642 3588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCC-ceeeccccCcccccccc-------ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH
Q 043316 910 GIAKFLNPHSSN-WTAFAGTFGYAAPEIAH-------MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 910 g~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~ 981 (1031)
|+++........ ....+||+.|+|||++. +..++.++||||+||++|||++|+.||...... .....+..
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~ 284 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ETYGKIVH 284 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHT
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HHHHHHHh
Confidence 999876543322 23467999999999987 356899999999999999999999998654321 11111111
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCC---CCHHHHHH
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR---PTMKKVCN 1027 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~ 1027 (1031)
.... ...+.... ....++.++|.+||+ +|++| |+++|+++
T Consensus 285 ~~~~--~~~p~~~~---~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 285 YKEH--LSLPLVDE---GVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHH--CCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cccC--cCCCcccc---CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1111 11111000 112367789999999 99998 58999864
No 146
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=358.09 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=197.3
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC--CceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH--RNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++| |||+++++++.+++..++
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 56999999999999999999888899999999875432 23346788999999999986 999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 87 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 45789999998653 588899999999999999999999 999999999999997 6889999999998765
Q ss_pred CCCC--CceeeccccCccccccccc-----------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 917 PHSS--NWTAFAGTFGYAAPEIAHM-----------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 917 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........... ....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---~~~~ 235 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH---AIID 235 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH---HHHC
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHH---HHhc
Confidence 4332 2345679999999999865 6788999999999999999999999875433211111 1111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+... ...+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~------~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 236 PNHEIEFPDIP------EKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp TTSCCCCCCCS------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCcccCCcccC------CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 11122222211 125778999999999999999999975
No 147
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.7e-38 Score=345.00 Aligned_cols=248 Identities=22% Similarity=0.310 Sum_probs=180.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|++..... ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhc-chHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 5799999999999999999964 5789999999976543 2234467889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+ ++++.+++.... .+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 92 ~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 678888776543 488999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+..... .. ...+.... ...+..
T Consensus 165 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~---~~~~~~~~-~~~~~~--- 234 (275)
T 2eue_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VL---FKNISNGV-YTLPKF--- 234 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--HH---HHHHHHTC-CCCCTT---
T ss_pred c-ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HH---HHHHHhCC-CCCCcc---
Confidence 3 22345678999999999987765 78999999999999999999998654321 11 11111111 111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 235 ---~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 235 ---LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1225778999999999999999999975
No 148
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.4e-38 Score=349.23 Aligned_cols=259 Identities=20% Similarity=0.309 Sum_probs=204.1
Q ss_pred hccCccceeecCCCccEEEEE-----eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC--
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-----LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-- 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-- 831 (1031)
+.|++.+.||+|+||.||+|+ ..+++.||||++.... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 458899999999999999997 3468999999997643 233567899999999999999999999999876
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 66899999999999999996543 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc----------chhhhhh
Q 043316 912 AKFLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN----------FSSFSNM 978 (1031)
Q Consensus 912 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~----------~~~~~~~ 978 (1031)
+........ ......+|..|+|||++.+..++.++||||+|+++|||+||+.|+...... .......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987754432 123456788899999999989999999999999999999999985422111 0011111
Q ss_pred HHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
............+.. ....+.+++.+||+.||.+|||++|+++.|++
T Consensus 253 ~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPN------CPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHHHHTTCCCCCCTT------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCC------CCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 111111111111111 12367789999999999999999999999863
No 149
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.8e-38 Score=347.29 Aligned_cols=255 Identities=17% Similarity=0.198 Sum_probs=204.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++++ +|++++++++++.+....++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS------DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT------TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC------ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 5799999999999999999964 679999999986532 234577899999999 79999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-----eEEecccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE-----AHVSDFGI 911 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~ 911 (1031)
||||+ +++|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+
T Consensus 84 v~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 999999998643 3589999999999999999999999 9999999999999988776 99999999
Q ss_pred ccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-hhhhHHHhh
Q 043316 912 AKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-FSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~ 983 (1031)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ....+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK 237 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc
Confidence 987654322 124567899999999999989999999999999999999999998765432111 111111110
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.... .+ .........+.+++.+||+.||++|||+++|++.|+
T Consensus 238 ~~~~--~~---~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 238 QSTP--LR---ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHSC--HH---HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred cCcc--HH---HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 0000 00 000011236788999999999999999999999886
No 150
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.9e-38 Score=347.33 Aligned_cols=257 Identities=24% Similarity=0.403 Sum_probs=193.8
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.++||+|+||+||+|+.. ..||||+++.... .....+.+.+|+.++++++||||+++++++ .....++||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 57999999999999999999763 3599999876432 234567899999999999999999999965 456689999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999997543 4588999999999999999999999 9999999999999999999999999999865432
Q ss_pred C--CCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 919 S--SNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 919 ~--~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
. .......||+.|+|||++. +..++.++||||+|+++|||++|+.||........ ....... ..........
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~--~~~~~~~~~~ 250 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIEMVGR--GSLSPDLSKV 250 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HHHHHHH--TSCCCCTTSS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HHHHhcc--cccCcchhhc
Confidence 2 2234567899999999986 56788899999999999999999999875543211 1111111 1111111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. .....+.+++.+||+.||++|||++|+++.|++
T Consensus 251 ~~---~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 251 RS---NCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285 (289)
T ss_dssp CT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cc---cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 11 112367889999999999999999999999873
No 151
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7e-38 Score=353.35 Aligned_cols=263 Identities=23% Similarity=0.336 Sum_probs=206.9
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhc--CCCCceeeeeeeEec
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTE--IRHRNIIKFHGFCSN 830 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~~~~~~ 830 (1031)
......++|.+.+.||+|+||.||+|+. +++.||||++... ..+.+.+|++++.. ++||||+++++++..
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3345567899999999999999999987 6999999998653 24567788888877 789999999999988
Q ss_pred CC----eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhh--------hCCCCCeeeCCCCCCCeee
Q 043316 831 AQ----HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH--------HDCLPPIVHGDISSKNVLL 898 (1031)
Q Consensus 831 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll 898 (1031)
.. ..++||||+++|+|.+++... .+++.+++.++.|++.||+||| +. +|+||||||+||++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 180 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence 76 789999999999999999753 4889999999999999999999 77 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCC----ceeeccccCcccccccccc------CCCccccchhhhHHHHHHHhC-------
Q 043316 899 DSEHEAHVSDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHMM------RATEKYDVHSFGVLALEVIKG------- 961 (1031)
Q Consensus 899 ~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltG------- 961 (1031)
+.++.+||+|||++......... .....||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 99999999999999876543321 2345789999999998765 334789999999999999999
Q ss_pred ---CCCCCCcCccchhhhhhHHHhh-hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 962 ---NHPRDYVSTNFSSFSNMITEIN-QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 962 ---~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.||.................. ....+.++.. ....+....+.+++.+||+.||++|||++||++.|++
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 261 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccCccccCcCcccHHHHHHHHHHHHhCCCCccc-ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 6777544332222222222211 1122222211 0112445578899999999999999999999999863
No 152
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.9e-38 Score=356.43 Aligned_cols=257 Identities=23% Similarity=0.405 Sum_probs=206.7
Q ss_pred HhccCccceeecCCCccEEEEEeC-CC-----cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SG-----IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~ 830 (1031)
.++|.+.+.||+|+||.||+|... ++ ..||+|++.... .....+.+.+|+.+++++ +||||+++++++.+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 367999999999999999999653 23 489999987643 223467889999999999 89999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCc-----------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAA-----------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
++..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. ||+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence 9999999999999999999975421 23578999999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhh
Q 043316 900 SEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~ 976 (1031)
.++.+||+|||++......... .....+|+.|+|||++.+..++.++||||+||++|||+| |..||........ ..
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~ 277 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FY 277 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HH
Confidence 9999999999999876433221 233456889999999998899999999999999999999 9999875443211 11
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. .........+... ...+.+++.+||+.||.+|||++|+++.|+
T Consensus 278 ~~---~~~~~~~~~~~~~------~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 278 KL---VKDGYQMAQPAFA------PKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp HH---HHHTCCCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HH---HhcCCCCCCCCCC------CHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 11 1111111111111 235778999999999999999999999986
No 153
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.3e-38 Score=346.02 Aligned_cols=253 Identities=23% Similarity=0.357 Sum_probs=204.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 36799999999999999999955 5689999999876543 22345778899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~ 913 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++. +||+|||++.
T Consensus 83 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999998887643 488999999999999999999999 9999999999999987665 9999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .....+. ..... .+..
T Consensus 157 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~---~~~~~-~~~~ 229 (284)
T 3kk8_A 157 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIK---AGAYD-YPSP 229 (284)
T ss_dssp ECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH---HTCCC-CCTT
T ss_pred EcccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHH---hcccc-CCch
Confidence 76533 2334567899999999999989999999999999999999999998644321 1111111 11111 1110
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........+.+++.+||+.||++|||++|+++
T Consensus 230 --~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 230 --EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp --TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00111235778999999999999999999975
No 154
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.8e-38 Score=369.31 Aligned_cols=253 Identities=24% Similarity=0.412 Sum_probs=202.0
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||.||+|....+..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++|
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 36788999999999999999988888889999997643 245689999999999999999999999876 678999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.++++... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 257 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp ECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred ehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999997532 23588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ......++..|+|||++.++.++.++|||||||++|||+| |+.||...... .....+........+..
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~-- 405 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPE-- 405 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTT--
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCC--
Confidence 322 1233456789999999998899999999999999999999 99998654331 11122222111111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+.+++.+||+.||++|||++++++.|+.
T Consensus 406 ----~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~ 437 (452)
T 1fmk_A 406 ----CPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437 (452)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 12357788999999999999999999999874
No 155
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-38 Score=351.74 Aligned_cols=259 Identities=20% Similarity=0.285 Sum_probs=197.8
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
...++|.+.+.||+|+||.||+|.. .+++.||||++..... .+....+.+.+|+.++++++||||+++++++.+++..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-SDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 3457899999999999999999965 4789999999976532 2233457889999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp EEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred EEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 9999999999999999764 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC-CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 915 LNPHS-SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 915 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......+++.|+|||++.+..++.++||||+|+++|||++|+.||...... ... ........ ..
T Consensus 184 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~---~~~~~~~~----~~ 254 (309)
T 2h34_A 184 TTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMG---AHINQAIP----RP 254 (309)
T ss_dssp -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHH---HHHHSCCC----CG
T ss_pred ccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHH---HHhccCCC----Cc
Confidence 64432 2234567899999999999989999999999999999999999998644321 111 11111111 00
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhh
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARP-TMKKVCNLLC 1030 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~ 1030 (1031)
..........+.+++.+||+.||++|| +++++++.|+
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 000011122577889999999999999 9999999886
No 156
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-38 Score=346.63 Aligned_cols=252 Identities=25% Similarity=0.350 Sum_probs=198.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR---SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG---CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc---cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 6799999999999999999965 578999999987653 233567899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 838 SEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
|||+++++|.+++.... ....+++..++.++.|++.||+|||+. ||+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999986532 224589999999999999999999999 99999999999999 456789999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......|++.|+|||++. +.++.++||||+|+++|||++|+.||...... ... ..... ........
T Consensus 176 ~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~---~~~~~-~~~~~~~~ 247 (285)
T 3is5_A 176 LFKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQ---QKATY-KEPNYAVE 247 (285)
T ss_dssp C-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHH-CCCCCCC-
T ss_pred ecCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHH---hhhcc-CCcccccc
Confidence 76433 2334567899999999886 46899999999999999999999998754321 111 11111 11111111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... ....+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 CRP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp -CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 1235678999999999999999999985
No 157
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.8e-38 Score=346.27 Aligned_cols=253 Identities=23% Similarity=0.421 Sum_probs=209.1
Q ss_pred HhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 467999999999999999999654 58899999986542 346788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999997643 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 917 PHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 917 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
.... ......+++.|+|||++.+..++.++||||+|+++|+|++ |..||...... ..............+..
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~- 236 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYRMERPEG- 236 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCCCCCTT-
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhccCCCCCCCC-
Confidence 4332 1233456789999999998899999999999999999999 99998654432 11122222222222211
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+|++.||++|||++|+++.|+
T Consensus 237 -----~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 237 -----CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp -----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 1235778999999999999999999999886
No 158
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.5e-38 Score=355.57 Aligned_cols=258 Identities=20% Similarity=0.337 Sum_probs=207.4
Q ss_pred HHhccCccceeecCCCccEEEEEeC------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 830 (1031)
..++|++.+.||+|+||.||+|... +++.||||++.... .......+.+|+.++++++||||+++++++.+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 4578999999999999999999553 47889999997543 22345678999999999999999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCc-------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAA-------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE 903 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1031)
.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCe
Confidence 9999999999999999999975321 13568899999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHH
Q 043316 904 AHVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 980 (1031)
+||+|||++........ ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... ....
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~ 251 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-----QVLR 251 (322)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----HHHH
T ss_pred EEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-----HHHH
Confidence 99999999986543221 1223456889999999998899999999999999999999 88997654321 1111
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..........+ .. ....+.+++.+||+.||.+|||+.|+++.|++
T Consensus 252 ~~~~~~~~~~~---~~---~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 252 FVMEGGLLDKP---DN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp HHHTTCCCCCC---TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HHHcCCcCCCC---CC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 11111111111 11 12357788999999999999999999999864
No 159
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.5e-38 Score=354.54 Aligned_cols=262 Identities=19% Similarity=0.262 Sum_probs=194.4
Q ss_pred HHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
...++|++.+.||+|+||+||+|. ..+++.||||+++.... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 345789999999999999999995 45799999999976532 223456778999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-----CCCceEEecc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-----SEHEAHVSDF 909 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-----~~~~~kl~Df 909 (1031)
++||||++ |+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++ .++.+||+||
T Consensus 109 ~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 109 HLIFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEEEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEEEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 99999998 59999997654 488999999999999999999999 999999999999994 4556999999
Q ss_pred ccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC-
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD- 987 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~- 987 (1031)
|+++.............+|+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..............+
T Consensus 182 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 260 (329)
T 3gbz_A 182 GLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDT 260 (329)
T ss_dssp THHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTT
T ss_pred CCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchh
Confidence 9998876554455666789999999998874 4899999999999999999999998654332 111111111100000
Q ss_pred ------------CCCCCCChhHHH------HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 ------------HRLPTPSRDVMD------KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ------------~~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+........ ...++.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 001100000011 1236789999999999999999999986
No 160
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.5e-38 Score=365.44 Aligned_cols=257 Identities=20% Similarity=0.297 Sum_probs=195.3
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA----- 831 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 831 (1031)
.++|++.+.||+|+||+||+|. ..+++.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 3679999999999999999995 4579999999997642 2234567889999999999999999999999654
Q ss_pred -CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 832 -QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 832 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
...|+||||++++ +.+.+.. .+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 4579999999864 5555543 378899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh--------
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI-------- 982 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~-------- 982 (1031)
+++..... ...+..+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.......
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~~~~~ 287 (464)
T 3ttj_A 210 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFM 287 (464)
T ss_dssp CC-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred eeeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence 99876532 3345678999999999999999999999999999999999999998754421 1111111000
Q ss_pred -------hhhcC--CC--------------CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 -------NQNLD--HR--------------LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 -------~~~~~--~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..... +. .+...........++.+++.+||+.||++|||++|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 00 01111111122456889999999999999999999985
No 161
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.7e-38 Score=359.54 Aligned_cols=262 Identities=18% Similarity=0.267 Sum_probs=199.5
Q ss_pred HhccCccceeecCCCccEEEEEeCC------CcEEEEEEccchhhhh--h-----hhcHHHHHHHHHHHhcCCCCceeee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPS------GIIFAVKKFNSQLLFD--E-----MADQDEFLNEVLALTEIRHRNIIKF 824 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~--~-----~~~~~~~~~Ei~~l~~l~h~niv~l 824 (1031)
.++|.+.+.||+|+||.||+|.... ++.||||++....... + ......+.+|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3579999999999999999997654 4789999986543110 0 1112345567777888999999999
Q ss_pred eeeEecC----CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-
Q 043316 825 HGFCSNA----QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD- 899 (1031)
Q Consensus 825 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~- 899 (1031)
++++... ...++||||+ +++|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9998764 4589999999 999999997642 4589999999999999999999999 999999999999999
Q ss_pred -CCCceEEeccccccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 900 -SEHEAHVSDFGIAKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 900 -~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
.++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999987643221 113455999999999999989999999999999999999999998754332
Q ss_pred chhhhhhHHHh----hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 972 FSSFSNMITEI----NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 972 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
........... ....+..++.. ....++.+++..||+.||++||++++|++.|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAA-----NAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTT-----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccc-----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 11111111111 11111110000 01236788899999999999999999999886
No 162
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.4e-38 Score=342.79 Aligned_cols=251 Identities=22% Similarity=0.413 Sum_probs=205.3
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
++|++.+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-----ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 6799999999999999999988888899999986543 246788999999999999999999999874 4589999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||+++++|.+++.... ...+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+......
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp ECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred ecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999999997642 23588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 919 SS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 919 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......++..|+|||++.++.++.++||||+|+++|||++ |+.||...... .....+........+..
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~--- 234 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQNLERGYRMVRPDN--- 234 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTT---
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHHHHhcccCCCCccc---
Confidence 21 1223456788999999998889999999999999999999 89998654321 11122222111111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+|++.||++|||+.++++.|+
T Consensus 235 ---~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 235 ---CPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---ccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 1236778999999999999999999999886
No 163
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2e-38 Score=346.76 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=205.1
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe--cCCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS--NAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~--~~~~~ 834 (1031)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+.++++++||||+++++++. ..+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 46899999999999999999965 4799999999976542 2234678999999999999999999999874 46788
Q ss_pred EEEEEeccCCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCC-----eeeCCCCCCCeeeCCCCceEEec
Q 043316 835 FIVSEYLDRGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPP-----IVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
++||||+++++|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 999999999999999976432 23489999999999999999999999 7 99999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
||.+..............|++.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~i~~~~~~ 234 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-----ELAGKIREGKFR 234 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHTCCC
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-----HHHHHHhhcccc
Confidence 999987654333334457899999999999888999999999999999999999998754321 111222222222
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLL 1029 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 1029 (1031)
..+.. ....+.+++.+||+.||++|||++|+++.+
T Consensus 235 ~~~~~------~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 235 RIPYR------YSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp CCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred cCCcc------cCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 22211 123677899999999999999999999765
No 164
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.1e-37 Score=340.25 Aligned_cols=253 Identities=24% Similarity=0.344 Sum_probs=205.5
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEE
Confidence 357899999999999999999965 4799999999865432 234577899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
+||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+...
T Consensus 82 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EEEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 9999999999999997643 488999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC--CCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 916 NPHS--SNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 916 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.... .......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||+........+..... . .....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~-~~~~~- 229 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE----K-KTYLN- 229 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT----T-CTTST-
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh----c-ccccC-
Confidence 4322 22345678999999999987665 78999999999999999999998765443222211111 0 01111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ......+.+++.+||+.||++|||++|+++
T Consensus 230 ~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 PW---KKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TG---GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ch---hhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 10 112235778999999999999999999975
No 165
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.4e-38 Score=345.94 Aligned_cols=247 Identities=21% Similarity=0.376 Sum_probs=199.8
Q ss_pred hccCccceeecCCCccEEEEEeC-CC-------cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SG-------IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN 830 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 830 (1031)
++|.+.+.||+|+||+||+|... ++ ..||+|++.... ....+.+.+|+.++++++||||+++++++.+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 67999999999999999999543 33 579999986543 3456789999999999999999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc-------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE------- 903 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~------- 903 (1031)
++..++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999998653 3488999999999999999999999 9999999999999998887
Q ss_pred -eEEeccccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCC-CCCcCccchhhhhhHH
Q 043316 904 -AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHP-RDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 904 -~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P-~~~~~~~~~~~~~~~~ 980 (1031)
+||+|||.+..... .....+++.|+|||++.+ ..++.++||||+||++|||++|..| |...... . ...
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--~---~~~ 229 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ--R---KLQ 229 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--H---HHH
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH--H---HHH
Confidence 99999999976532 234567899999999987 6789999999999999999996554 3322211 1 111
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.. . .....+... ...+.+++.+||+.||++|||++|+++.|++
T Consensus 230 ~~-~-~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 230 FY-E-DRHQLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp HH-H-TTCCCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred Hh-h-ccCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 11 1 111111111 1246788999999999999999999999874
No 166
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=355.98 Aligned_cols=246 Identities=21% Similarity=0.313 Sum_probs=203.6
Q ss_pred HHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhh----hhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDE----MADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~----~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
..++|++.+.||+|+||.||+|. ..+++.||||++........ ....+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45789999999999999999995 46789999999976542211 11334577899999999999999999999999
Q ss_pred CeeEEEEEeccCC-CchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 832 QHSFIVSEYLDRG-SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 832 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999997654 488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
++...... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ..... .
T Consensus 176 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------~~~~~--~ 242 (335)
T 3dls_A 176 SAAYLERG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------VEAAI--H 242 (335)
T ss_dssp TCEECCTT-CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------TTTCC--C
T ss_pred cceECCCC-CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------Hhhcc--C
Confidence 99877543 33455779999999999988776 88999999999999999999998643221 00000 0
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.+.. ....+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~------~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 243 PPYL------VSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp CSSC------CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcc------cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 1235778999999999999999999986
No 167
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.3e-38 Score=360.38 Aligned_cols=250 Identities=22% Similarity=0.336 Sum_probs=198.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC--CCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR--HRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~~~~l 836 (1031)
.+|.+.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++..++..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 46999999999999999999888899999999876432 2345678999999999996 5999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++.+.
T Consensus 134 v~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 999 56789999998653 578889999999999999999999 999999999999995 6899999999998765
Q ss_pred CCCC--CceeeccccCccccccccc-----------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 917 PHSS--NWTAFAGTFGYAAPEIAHM-----------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 917 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ ...
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~---~~~ 282 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA---IID 282 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH---HHC
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH---HhC
Confidence 4322 2345679999999999865 36889999999999999999999998754332111111 111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+... ...+.+++.+||+.||++|||+.|+++
T Consensus 283 ~~~~~~~~~~~------~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 283 PNHEIEFPDIP------EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp TTSCCCCCCCS------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCCCCccc------hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 11111222211 235778999999999999999999975
No 168
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.1e-38 Score=345.76 Aligned_cols=250 Identities=22% Similarity=0.372 Sum_probs=207.2
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|... +++.||+|++...... +....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 67999999999999999999654 6889999998765422 234567889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 9999999999998754 3588999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........|++.|+|||++.+..++.++||||+|+++|||++|+.||+..... ......... ....+..
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~-~~~~~~~---- 237 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLRIKKN-EYSIPKH---- 237 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHTT-CCCCCTT----
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhhc-cCCCccc----
Confidence 444455667899999999999888999999999999999999999998754321 111111111 1111111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 238 --~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 238 --INPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --cCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1135778899999999999999999875
No 169
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.2e-38 Score=353.10 Aligned_cols=252 Identities=23% Similarity=0.407 Sum_probs=198.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcE----EEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGII----FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
++|++.+.||+|+||+||+|.. .+++. ||+|++..... ....+.+.+|+.++++++||||+++++++. ++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG---RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS---CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCc
Confidence 5788999999999999999965 34543 78887754321 223456778999999999999999999986 456
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred cEEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 899999999999999997652 3588899999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... ......++..|+|||++.+..++.++||||+||++|||+| |+.||...... .....+. .......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~---~~~~~~~ 238 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLE---KGERLAQ 238 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHH---TTCBCCC
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHH---cCCCCCC
Confidence 8754332 2345567889999999999899999999999999999999 99998754432 1111111 1111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. ....+.+++.+||+.||.+|||++|+++.|+
T Consensus 239 ~~~------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 239 PQI------CTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CTT------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCc------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 1124667899999999999999999999886
No 170
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.1e-38 Score=343.17 Aligned_cols=254 Identities=23% Similarity=0.336 Sum_probs=203.3
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
++|++.+.||+|+||.||+|... +++.||||+++....... ....+.+.+|+.++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 57999999999999999999664 799999999876543221 124678999999999999999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC----ceEEecccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH----EAHVSDFGI 911 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~ 911 (1031)
+||||+++++|.+++... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++ .+||+|||.
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999999754 3588999999999999999999999 999999999999999877 799999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+....... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||...... . ....+.. ....
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~---~~~~~~~---~~~~ 229 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--E---TLTNISA---VNYD 229 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHT---TCCC
T ss_pred ceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--H---HHHHhHh---cccC
Confidence 98764332 234567899999999999889999999999999999999999998654321 1 1111111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 111111112346788999999999999999999986
No 171
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.3e-38 Score=351.80 Aligned_cols=262 Identities=22% Similarity=0.339 Sum_probs=208.8
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeee
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFH 825 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~ 825 (1031)
+.....++|++.+.||+|+||.||+|+. .+++.||||+++.... ....+.+.+|+.+++++ +||||++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC---cHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3333457899999999999999999963 3568999999976432 23456789999999999 699999999
Q ss_pred eeEecC-CeeEEEEEeccCCCchhhcccCCc-------------cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCC
Q 043316 826 GFCSNA-QHSFIVSEYLDRGSLTTILKDDAA-------------AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDI 891 (1031)
Q Consensus 826 ~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 891 (1031)
+++... +..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+. ||+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 998765 458999999999999999976542 12278899999999999999999999 9999999
Q ss_pred CCCCeeeCCCCceEEeccccccccCCCCCC--ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCc
Q 043316 892 SSKNVLLDSEHEAHVSDFGIAKFLNPHSSN--WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYV 968 (1031)
Q Consensus 892 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~ 968 (1031)
||+||+++.++.+||+|||+++........ .....+|+.|+|||++.+..++.++||||+||++|||+| |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999999876543322 234567889999999999899999999999999999998 99998755
Q ss_pred CccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 969 STNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..... .. ...........+.. ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 255 ~~~~~-~~---~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 255 KIDEE-FC---RRLKEGTRMRAPDY------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp CCSHH-HH---HHHHHTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred chhHH-HH---HHhccCccCCCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 43211 11 11111111111111 1235778899999999999999999999886
No 172
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=353.67 Aligned_cols=259 Identities=17% Similarity=0.242 Sum_probs=193.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||+||+|.. .+++.||||++...... .....+.+|+.++++++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 5799999999999999999965 47899999998654321 1122455799999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++ |+|.+++.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 79 ~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ecccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 99997 58888887643 3588899999999999999999999 999999999999999999999999999987655
Q ss_pred CCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC---
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP--- 993 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 993 (1031)
.........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ................++..
T Consensus 153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGC
T ss_pred CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcc
Confidence 4444556678999999999876 568999999999999999999999987544311 11111111111011111000
Q ss_pred ------------ChhH----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 ------------SRDV----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ------------~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... ......+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000 011235789999999999999999999975
No 173
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=349.62 Aligned_cols=246 Identities=22% Similarity=0.253 Sum_probs=193.1
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 836 (1031)
++|++.++||+|+||+||+|... +++.||||++..... .......+.+|+..+.++ +||||+++++++.+++..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 67999999999999999999664 799999999865432 123344556666666555 89999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+ +++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 668988887543 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. .......||+.|+|||++.+ .++.++||||+||++|||++|..|+..... ...+.. ...+ ...
T Consensus 209 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------~~~~~~---~~~~--~~~ 273 (311)
T 3p1a_A 209 TA-GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------WQQLRQ---GYLP--PEF 273 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------HHHHTT---TCCC--HHH
T ss_pred cC-CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHhc---cCCC--ccc
Confidence 33 23345668999999999876 789999999999999999999776432211 111111 1110 011
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.......+.+++.+||+.||++|||++|+++
T Consensus 274 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 274 TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1112346888999999999999999999986
No 174
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.3e-38 Score=352.23 Aligned_cols=251 Identities=22% Similarity=0.365 Sum_probs=207.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 36799999999999999999965 46889999998765322 23456788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 119 v~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp EECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999998754 3588999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........|++.|+|||++.+..++.++||||+|+++|||++|+.||...... . ....+... ...++..
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~---~~~~~~~~-~~~~~~~--- 263 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--E---TYLRIKKN-EYSIPKH--- 263 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--H---HHHHHHHT-CCCCCTT---
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--H---HHHHHhcC-CCCCCcc---
Confidence 4444455677899999999999888999999999999999999999998654321 1 11111111 1111111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 264 ---~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 264 ---INPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1125678899999999999999999875
No 175
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.8e-37 Score=343.68 Aligned_cols=248 Identities=26% Similarity=0.397 Sum_probs=207.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|++.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 5689999999999999999954 5799999999876432 23467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 99 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999999999753 488999999999999999999999 999999999999999999999999999987755
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
.........|++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.....+..+..
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~---- 242 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLFLIPKNNPPTLEGN---- 242 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCCSS----
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHHHhhcCCCCCCccc----
Confidence 444445667899999999999989999999999999999999999998654321 11111111122222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||+.|+++
T Consensus 243 --~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 243 --YSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp --CCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --cCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1235778999999999999999999975
No 176
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.3e-38 Score=362.64 Aligned_cols=256 Identities=23% Similarity=0.284 Sum_probs=193.7
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh----hhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD----EMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
..++|.+.+.||+|+||+||+|.. .+++.||||++....... +......+.+|+.++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 457899999999999999999954 578999999997654221 11223458899999999999999999999865
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---ceEEec
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---EAHVSD 908 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~D 908 (1031)
+..++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 45799999999999999987653 588999999999999999999999 999999999999997554 599999
Q ss_pred cccccccCCCCCCceeeccccCccccccccc---cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM---MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
||+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ....+. .
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i~---~- 359 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQIT---S- 359 (419)
T ss_dssp SSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHHH---T-
T ss_pred cccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHHh---c-
Confidence 9999876532 33455779999999999853 5678899999999999999999999875433211 111111 1
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.........+.+++.+||+.||++|||++|+++
T Consensus 360 --~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 360 --GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp --TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1111111111122346788999999999999999999986
No 177
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=347.74 Aligned_cols=264 Identities=22% Similarity=0.279 Sum_probs=199.8
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhh-hhhcHHHHHHHHHHHhcC---CCCceeeeeeeEecC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFD-EMADQDEFLNEVLALTEI---RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~~~ 831 (1031)
..++|++.+.||+|+||+||+|+. .+++.||||++....... .......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999975 579999999986533211 112234566777777666 499999999999775
Q ss_pred C-----eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 832 Q-----HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 832 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
. ..++||||++ ++|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 5 5799999997 599999976542 3489999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPP 239 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCCC
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC
Confidence 999999876533 2345567899999999999999999999999999999999999998654432 11111111111100
Q ss_pred CCCCC---------------CCChh-HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 DHRLP---------------TPSRD-VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ~~~~~---------------~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...++ ..... ..+....+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00000 00000 0011236788999999999999999999985
No 178
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.1e-38 Score=351.31 Aligned_cols=257 Identities=24% Similarity=0.348 Sum_probs=206.1
Q ss_pred hccCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe--cC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS--NA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~--~~ 831 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++. +.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 6799999999999999999973 468899999987643 234567899999999999999999999986 45
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 67899999999999999997643 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch----------hhhhh
Q 043316 912 AKFLNPHSS---NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS----------SFSNM 978 (1031)
Q Consensus 912 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~----------~~~~~ 978 (1031)
+........ ......+|..|+|||++.+..++.++||||+||++|+|++|+.||........ .....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 987654332 12334578889999999998899999999999999999999999754332110 01111
Q ss_pred HHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 979 ITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
............+. .....+.+++.+||+.||++|||++|+++.|+
T Consensus 254 ~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 254 LELLEEGQRLPAPP------ACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHTTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcccCCCCCC------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111111111 11235778999999999999999999999886
No 179
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-38 Score=354.26 Aligned_cols=265 Identities=20% Similarity=0.240 Sum_probs=199.0
Q ss_pred HHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhh-hhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDE-MADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
...++|++.+.||+|+||.||+|... +++.||||++........ ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999664 689999999975432211 1123467899999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++ +|.+++.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999986 8888887643 3578899999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC-
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP- 991 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~- 991 (1031)
.............+|+.|+|||++.+. .++.++||||+||++|||++|..||...... .................++
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSS
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhh
Confidence 876554455667889999999998764 4789999999999999999999997654331 1111111111111110000
Q ss_pred --------------CCCh--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 --------------TPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 --------------~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+. ........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 00111246889999999999999999999986
No 180
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.5e-38 Score=361.92 Aligned_cols=204 Identities=25% Similarity=0.406 Sum_probs=165.2
Q ss_pred HHHhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCC-
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQ- 832 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~- 832 (1031)
...++|++.+.||+|+||.||+|. ..+++.||||++.... ......+.+.+|+.+++++. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 346789999999999999999995 4579999999986542 22345677889999999997 999999999997544
Q ss_pred -eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 -HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..|+||||++ ++|.++++.. .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 7899999997 5899888753 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC---------------------CCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 912 AKFLNPH---------------------SSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 912 a~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
|+.+... ....+..+||++|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9865321 112344679999999999876 578999999999999999999999987544
No 181
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-37 Score=346.88 Aligned_cols=254 Identities=23% Similarity=0.347 Sum_probs=202.3
Q ss_pred cCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec--CCe
Q 043316 761 FGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN--AQH 833 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~~ 833 (1031)
|++.+.||+|+||+||+|.+ .+++.||||+++... .....+.+.+|++++++++||||+++++++.+ ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 48999999999999988854 268899999997643 23346789999999999999999999999987 467
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++... .+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 89999999999999999764 388999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh----------hhhhHH
Q 043316 914 FLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS----------FSNMIT 980 (1031)
Q Consensus 914 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~----------~~~~~~ 980 (1031)
........ .....++..|+|||++.+..++.++||||+||++|||+||+.||......... ......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 87543321 23455788899999999988999999999999999999999997643321100 001111
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..........+. .....+.+++.+||+.||++|||++|+++.|+
T Consensus 263 ~~~~~~~~~~~~------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 263 LLERGERLPRPD------KCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHHTTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcccCCCCCc------cccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111111111111 11236788999999999999999999999886
No 182
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=367.34 Aligned_cols=304 Identities=23% Similarity=0.197 Sum_probs=151.7
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 35666666666666555555666666666666666666555555555555555555555555222223445555555555
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 260 (1031)
++|.+++..|..|.++++|++|++++|.+++..|.. |.++++|+.|+|++|++++.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------------------------~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRA------------------------FSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTS------------------------STTCTTCCEEEEESCCCSSC
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhh------------------------ccCCCCCCEEECCCCcCccc
Confidence 555555444444555555555555555444444444 44444444444444444444
Q ss_pred CCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccc
Q 043316 261 IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNL 340 (1031)
Q Consensus 261 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 340 (1031)
.+..|.++++|+.|+|++|++.+..+..|..+++|+.|++++|.+.+.+|.......+|++|++++|++++..+..+..+
T Consensus 168 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 247 (477)
T 2id5_A 168 PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL 247 (477)
T ss_dssp CHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTC
T ss_pred ChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCc
Confidence 44444445555555555555544444445555555555555554444333333322333333333333332222344445
Q ss_pred ccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceec
Q 043316 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420 (1031)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 420 (1031)
++|++|+|++|.+++..+..|..+++|+.|+|++|++++..|..|.++++ |++|++
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~------------------------L~~L~L 303 (477)
T 2id5_A 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY------------------------LRVLNV 303 (477)
T ss_dssp TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTT------------------------CCEEEC
T ss_pred cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCccc------------------------CCEEEC
Confidence 55555555555555444444444555555555555544444444444444 444444
Q ss_pred cccccccccccccCCCCCCCeeccccccccCc
Q 043316 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452 (1031)
Q Consensus 421 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 452 (1031)
++|+++++.+..|..+++|+.|+|++|++.+.
T Consensus 304 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 304 SGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred CCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 44444444444455555555566666665544
No 183
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=348.42 Aligned_cols=254 Identities=27% Similarity=0.473 Sum_probs=198.5
Q ss_pred hccCccceeecCCCccEEEEEeCC-----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS-----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.+|+..+.||+|+||.||+|.... +..||||+++... .......+.+|+.++++++||||+++++++.+.+.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 467788999999999999996532 3469999987543 22345678999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 999999999999999997642 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 914 FLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 914 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
........ .....+++.|+|||++.+..++.++||||+||++|||++ |+.||...... .....+.......
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~~~~~~~~~~ 270 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVMKAINDGFRLP 270 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHCCCcCC
Confidence 76543221 123345788999999998899999999999999999999 99998644321 1112221111111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.+. .....+.+++.+||+.||++||++.|+++.|++
T Consensus 271 ~~~------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 306 (333)
T 1mqb_A 271 TPM------DCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306 (333)
T ss_dssp CCT------TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred Ccc------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 112357788999999999999999999998863
No 184
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-38 Score=356.15 Aligned_cols=253 Identities=25% Similarity=0.381 Sum_probs=191.8
Q ss_pred hccCccceeecCCCccEEEEEeC--C--CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe-cCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--S--GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS-NAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~-~~~~ 833 (1031)
..|...+.||+|+||.||+|... + +..||||.++... +....+.+.+|+.++++++||||+++++++. .++.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS---CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCC
Confidence 34677889999999999999653 2 2468999986532 2345678999999999999999999999875 4568
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++|+|.++++... ..+++.++..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 899999999999999997643 3578899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC----CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 914 FLNPHSS----NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 914 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
....... ......+|+.|+|||++.+..++.++|||||||++|||+| |..||....... .... .......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~---~~~~~~~ 315 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVY---LLQGRRL 315 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHH---HHTTCCC
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHH---HHcCCCC
Confidence 6643221 1234456789999999999999999999999999999999 677776543321 1111 1111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 316 ~~p~~------~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 316 LQPEY------CPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 1235778899999999999999999999886
No 185
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=342.77 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=199.7
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
+|.....||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 355566899999999999964 578999999986542 234677899999999999999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC-CCceEEeccccccccCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS-EHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~ 917 (1031)
||+++++|.+++........+++..+..++.|++.||+|||+. ||+||||||+||+++. ++.+||+|||++.....
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999998764444567889999999999999999999 9999999999999987 89999999999987654
Q ss_pred CCCCceeeccccCccccccccccC--CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMR--ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.........|++.|+|||++.+.. ++.++||||+|+++|||++|+.||........... ........+..+..
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~-- 250 (295)
T 2clq_A 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKVHPEIPES-- 250 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH---HHHHHCCCCCCCTT--
T ss_pred CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH---hhcccccccccccc--
Confidence 333344567899999999987654 78999999999999999999999864433211111 11111122222211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||+.|+++
T Consensus 251 ----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 251 ----MSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----SCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1235778899999999999999999975
No 186
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.3e-38 Score=349.01 Aligned_cols=256 Identities=20% Similarity=0.310 Sum_probs=196.8
Q ss_pred hccCcc-ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeE
Q 043316 759 DDFGEK-YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 759 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 835 (1031)
+.|.+. +.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+++..+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 467774 7899999999999964 579999999986542 23467889999999885 7999999999999999999
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEeccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSDFGIA 912 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a 912 (1031)
+||||+++++|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999997643 488899999999999999999999 9999999999999998776 999999999
Q ss_pred cccCCCCC-------CceeeccccCccccccccc-----cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhh-----
Q 043316 913 KFLNPHSS-------NWTAFAGTFGYAAPEIAHM-----MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSF----- 975 (1031)
Q Consensus 913 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~----- 975 (1031)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 86542211 1234568999999999875 568899999999999999999999987554321111
Q ss_pred -----hhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 976 -----SNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 976 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.. .....+..........+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 242 CPACQNMLFESIQE---GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CHHHHHHHHHHHHH---CCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhHHHHHHHHHhc---cCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 001111111 1111111111112346789999999999999999999986
No 187
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.2e-38 Score=353.84 Aligned_cols=248 Identities=26% Similarity=0.378 Sum_probs=199.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
+.|+..+.||+|+||+||+|+. .+++.||||++..... ......+.+.+|++++++++||||+++++++.+++..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 5689999999999999999964 6799999999865432 1223457789999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||++ |++.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 133 ~e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 67888775432 3588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
. ....||+.|+|||++. ++.++.++|||||||++|||++|+.||....... ....+.....+....
T Consensus 207 ~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~-- 275 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNESPALQS-- 275 (348)
T ss_dssp B----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCCCCCC--
T ss_pred C----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhcCCCCCCC--
Confidence 2 3457899999999984 4678999999999999999999999976443211 111111111111111
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 276 ~~---~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 276 GH---WSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC---CCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11 1235678899999999999999999875
No 188
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.6e-37 Score=340.55 Aligned_cols=249 Identities=26% Similarity=0.395 Sum_probs=205.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 46899999999999999999965 46889999998764422 23346788999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999999997643 488999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
.. ......|++.|+|||++.+..++.++||||+|+++|||++|+.||+..... ... ..+.. ....++..
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~---~~~~~-~~~~~~~~--- 234 (284)
T 2vgo_A 166 SL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETH---RRIVN-VDLKFPPF--- 234 (284)
T ss_dssp SS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHH---HHHHT-TCCCCCTT---
T ss_pred cc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHH---HHHhc-cccCCCCc---
Confidence 32 234567899999999999988999999999999999999999998754321 111 11111 11122211
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+|++.||.+|||++|+++
T Consensus 235 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 235 ---LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1235678999999999999999999975
No 189
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.4e-37 Score=353.58 Aligned_cols=256 Identities=23% Similarity=0.260 Sum_probs=201.7
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-----CCceeeeeeeEec
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-----HRNIIKFHGFCSN 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----h~niv~l~~~~~~ 830 (1031)
..++|.+.++||+|+||+||+|+. .+++.||||+++... ...+.+.+|+.++++++ ||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-----KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-----HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-----hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 347899999999999999999965 578999999986532 23556778999998886 9999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC----------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---------- 900 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---------- 900 (1031)
.+..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||+. ||+||||||+||+++.
T Consensus 108 ~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~ 182 (360)
T 3llt_A 108 YDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITV 182 (360)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred CCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccch
Confidence 99999999999 8999999986542 3588999999999999999999999 9999999999999975
Q ss_pred ---------------CCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCC
Q 043316 901 ---------------EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPR 965 (1031)
Q Consensus 901 ---------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~ 965 (1031)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp ECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred hcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 788999999999875432 24567899999999999999999999999999999999999998
Q ss_pred CCcCccchhhhhhHHHhhhhc----------------------CCCCCCCChhHH--H------------HHHHHHHHHH
Q 043316 966 DYVSTNFSSFSNMITEINQNL----------------------DHRLPTPSRDVM--D------------KLMSIMEVAI 1009 (1031)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~--~------------~~~~l~~li~ 1009 (1031)
...... .....+....... ...++....... . ....+.+++.
T Consensus 260 ~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 337 (360)
T 3llt_A 260 RTHEHM--EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY 337 (360)
T ss_dssp CCSSHH--HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHH
T ss_pred CCCcHH--HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHH
Confidence 654321 1111111100000 000111100000 0 0135779999
Q ss_pred hhccCCCCCCCCHHHHHH
Q 043316 1010 LCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 1010 ~cl~~dP~~Rps~~evl~ 1027 (1031)
+||+.||++|||++|+++
T Consensus 338 ~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 338 SILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHCCSSGGGSCCHHHHTT
T ss_pred HHhcCChhhCCCHHHHhc
Confidence 999999999999999975
No 190
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.6e-37 Score=345.66 Aligned_cols=259 Identities=23% Similarity=0.342 Sum_probs=196.0
Q ss_pred HHhccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
..++|.+.+.||+|+||.||+|... +++.||||+++.... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 3478999999999999999999543 345899999876432 2234677899999999999999999999997754
Q ss_pred -----eeEEEEEeccCCCchhhcccC---CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCce
Q 043316 833 -----HSFIVSEYLDRGSLTTILKDD---AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 833 -----~~~lv~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
..++||||+++++|.+++... .....+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 359999999999999998532 2234689999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHH
Q 043316 905 HVSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~ 981 (1031)
||+|||++........ ......+++.|+|||.+.+..++.++||||+|+++|||++ |..||...... . ....
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~---~~~~ 261 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--E---MYDY 261 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G---HHHH
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--H---HHHH
Confidence 9999999987643321 1234456889999999999899999999999999999999 88897654432 1 1111
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.........+. .....+.+++.+||+.||++|||+.|+++.|++
T Consensus 262 ~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 262 LLHGHRLKQPE------DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp HHTTCCCCCBT------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHcCCCCCCCc------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11111111111 112367889999999999999999999999863
No 191
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-37 Score=340.33 Aligned_cols=252 Identities=25% Similarity=0.367 Sum_probs=203.5
Q ss_pred hccCccc-eeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKY-CIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|.+.+ .||+|+||.||+|... +++.||||+++... .....+.+.+|++++++++||||+++++++ ..+..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCc
Confidence 4566665 8999999999999643 67889999997642 234567899999999999999999999999 45568
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 99999999999999997542 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... .....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... . ....+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~---~~~~i~~~~~~~~ 234 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--E---VMAFIEQGKRMEC 234 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--H---HHHHHHTTCCCCC
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--H---HHHHHhcCCcCCC
Confidence 7543321 123346789999999988889999999999999999998 99998654431 1 1112222111222
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. ....+.+++.+||+.||++||++.|+++.|+
T Consensus 235 ~~~------~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 235 PPE------CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CTT------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCC------cCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 211 1236778999999999999999999999886
No 192
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=9.6e-38 Score=341.16 Aligned_cols=248 Identities=26% Similarity=0.416 Sum_probs=196.5
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-CeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-QHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-~~~~l 836 (1031)
.++|++.+.||+|+||.||+|+. +++.||||+++... ..+.+.+|+.++++++||||+++++++.+. +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 46899999999999999999987 58899999986532 457789999999999999999999997554 57899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++.... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 999999999999997643 23478899999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
.. .....+++.|+|||++.+..++.++||||+|+++|||+| |+.||...... .....+........+..
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~-- 238 (278)
T 1byg_A 169 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDG-- 238 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHTTTCCCCCCTT--
T ss_pred cc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhcCCCCCCccc--
Confidence 32 233457889999999998899999999999999999998 99998754331 11122222212222211
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
....+.+++.+||+.||++|||+.|+++.|+
T Consensus 239 ----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 239 ----CPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 1236778899999999999999999999986
No 193
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.7e-37 Score=341.60 Aligned_cols=253 Identities=25% Similarity=0.357 Sum_probs=201.4
Q ss_pred HhccCccc-eeecCCCccEEEEEe---CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKY-CIGKGRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|.+.+ .||+|+||.||+|.. .+++.||||+++... .+....+.+.+|+.++++++||||+++++++ ..+.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 35788887 999999999999943 347899999997653 2233467899999999999999999999999 5667
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 899999999999999998643 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 914 FLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 914 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... . ....+.......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~---~~~~~~~~~~~~ 240 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--E---VTAMLEKGERMG 240 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--H---HHHHHHTTCCCC
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--H---HHHHHHcCCCCC
Confidence 76543322 122345788999999998889999999999999999999 99998754431 1 111111111112
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+. .....+.+++.+||+.||++|||+.|+++.|+
T Consensus 241 ~~~------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 241 CPA------GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCT------TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 211 11236778999999999999999999999986
No 194
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.1e-38 Score=354.24 Aligned_cols=261 Identities=20% Similarity=0.289 Sum_probs=199.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD--DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC--chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 46899999999999999999965 4699999999865432 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.++..... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 102 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 999999999988876543 488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHh-------------
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEI------------- 982 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~------------- 982 (1031)
..........+++.|+|||++.+. .++.++||||+||++|||++|+.||......... .......
T Consensus 176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 254 (331)
T 4aaa_A 176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL-YHIMMCLGNLIPRHQELFNK 254 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCSCCHHHHHHHHH
T ss_pred CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH-HHHHHHhCCCChhhhhHhhh
Confidence 544445566789999999998875 6899999999999999999999998755432111 1110000
Q ss_pred ----hhhcCCCCCCCCh---hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 983 ----NQNLDHRLPTPSR---DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 983 ----~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+....... ........+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000001100000 00111346889999999999999999999875
No 195
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.1e-37 Score=344.31 Aligned_cols=253 Identities=25% Similarity=0.400 Sum_probs=198.7
Q ss_pred hccCccceeecCCCccEEEEEeCC----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeE-ecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC-SNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~-~~~~~ 833 (1031)
.+|.+.+.||+|+||.||+|...+ ...||+|++.... .....+.+.+|+.++++++||||+++++++ ..++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC---CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 468888999999999999996532 2368999987532 234567899999999999999999999986 45678
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++|+|.++++... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 899999999999999997643 3578899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC----CCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 914 FLNPHS----SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 914 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
...... .......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...... ... .........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~---~~~~~~~~~ 251 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DIT---VYLLQGRRL 251 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THH---HHHHTTCCC
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHH---HHHhcCCCC
Confidence 764322 12234567889999999999899999999999999999999 55555443321 111 111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..+... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 252 ~~~~~~------~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 252 LQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCccC------CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 125778899999999999999999999986
No 196
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.6e-38 Score=349.19 Aligned_cols=253 Identities=21% Similarity=0.395 Sum_probs=196.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcE----EEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGII----FAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
++|++.+.||+|+||.||+|.. .+++. ||+|.+.... .....+.+.+|+.++++++||||+++++++.++.
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 5799999999999999999964 44543 5777765432 2345778999999999999999999999998765
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 789999999999999997653 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 914 FLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 914 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||+..... .... .+........
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~---~~~~~~~~~~ 240 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS---ILEKGERLPQ 240 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH---HHHTTCCCCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHH---HHHcCCCCCC
Confidence 7644322 2233456788999999999999999999999999999999 99998755432 1111 1111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.. ....+.+++.+||+.||.+|||++|+++.|++
T Consensus 241 ~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 275 (327)
T 3lzb_A 241 PPI------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 275 (327)
T ss_dssp CTT------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred Ccc------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 111 12257789999999999999999999998863
No 197
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=343.15 Aligned_cols=254 Identities=24% Similarity=0.337 Sum_probs=199.5
Q ss_pred ccCccceeecCCCccEEEEEeC-CC---cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee-
Q 043316 760 DFGEKYCIGKGRQGSVYKAELP-SG---IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS- 834 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~- 834 (1031)
.|...++||+|+||+||+|... ++ ..||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 4666789999999999999642 33 379999986532 234567899999999999999999999999776555
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||+.+++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 99999999999999997643 4578899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC----CCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHS----SNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
..... .......+++.|+|||.+.+..++.++||||+|+++|||++|..|+...... .... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~---~~~~~~~~~~~ 249 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLT---HFLAQGRRLPQ 249 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHH---HHHHTTCCCCC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHH---HHhhcCCCCCC
Confidence 54321 1223456788999999999989999999999999999999966653322221 1111 11111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
+.. ....+.+++.+||+.||.+|||++|+++.|++
T Consensus 250 ~~~------~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 250 PEY------CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp CTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred Ccc------chHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111 11357789999999999999999999999863
No 198
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.2e-38 Score=359.59 Aligned_cols=252 Identities=25% Similarity=0.312 Sum_probs=189.9
Q ss_pred HhccCcc-ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHH-hcCCCCceeeeeeeEec----
Q 043316 758 IDDFGEK-YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL-TEIRHRNIIKFHGFCSN---- 830 (1031)
Q Consensus 758 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l-~~l~h~niv~l~~~~~~---- 830 (1031)
.++|.+. +.||+|+||+||+|.. .+++.||||++... ..+.+|+.++ +..+||||+++++++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 3567766 6899999999999955 57899999998532 3456788886 44589999999999875
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCceEEe
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHEAHVS 907 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 907 (1031)
.+..|+||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. ||+||||||+||+++. ++.+||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 567899999999999999998643 24589999999999999999999999 9999999999999997 7889999
Q ss_pred ccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcC
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLD 987 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 987 (1031)
|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ......+....
T Consensus 207 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~i~~~~- 283 (400)
T 1nxk_A 207 DFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIRMGQ- 283 (400)
T ss_dssp CCTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-CSHHHHHHHTC-
T ss_pred ecccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-HHHHHHHHcCc-
Confidence 99999876432 2335667899999999999989999999999999999999999998654332110 00111111110
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+.. .......++.+++.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~--~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 284 YEFPNP--EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCCCTT--TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCc--ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111110 01112235788999999999999999999986
No 199
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.2e-38 Score=349.59 Aligned_cols=263 Identities=21% Similarity=0.306 Sum_probs=205.6
Q ss_pred cHHHHHHHHhccCcc-ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeee
Q 043316 750 LYEEIIKAIDDFGEK-YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHG 826 (1031)
Q Consensus 750 ~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~ 826 (1031)
.+.......++|.+. +.||+|+||.||+|.. .+++.||||++..... .......+.+|+.++++++ ||||+++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET--TEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 334445556778877 8899999999999965 4699999999976542 2234678899999999995 699999999
Q ss_pred eEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCc
Q 043316 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHE 903 (1031)
Q Consensus 827 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~ 903 (1031)
++.+.+..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++. ++.
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999999986543 24689999999999999999999999 9999999999999998 789
Q ss_pred eEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 904 AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+....
T Consensus 173 ~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~ 249 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--ETYLNISQVN 249 (327)
T ss_dssp EEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC
T ss_pred EEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHHHhcc
Confidence 9999999998765332 234567999999999999999999999999999999999999998654331 1111111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....... .......+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 250 VDYSEET------FSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp CCCCTTT------TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccCchh------hcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1111111 1112235778899999999999999999975
No 200
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.8e-37 Score=339.50 Aligned_cols=253 Identities=20% Similarity=0.331 Sum_probs=200.7
Q ss_pred HhccCccceeecCCCccEEEEEeCC----CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPS----GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|.+.+.||+|+||.||+|.... +..||||++.... .....+.+.+|+.++++++||||+++++++.++ .
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-P 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-S
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-C
Confidence 3679999999999999999996432 3469999987643 223467899999999999999999999998754 5
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CEEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 689999999999999997643 3578999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 914 FLNPHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 914 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
....... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... .. ...........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~---~~~~~~~~~~~~ 236 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VI---GVLEKGDRLPKP 236 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HH---HHHHHTCCCCCC
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HH---HHHhcCCCCCCC
Confidence 7654322 2234456889999999998899999999999999999998 999986443321 11 111111111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 237 ~~------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 237 DL------CPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp TT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC------CCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 11 1235778999999999999999999999886
No 201
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.4e-37 Score=340.29 Aligned_cols=248 Identities=21% Similarity=0.310 Sum_probs=199.0
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----CCee
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----AQHS 834 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~~ 834 (1031)
.|.+.+.||+|+||.||+|.. .++..||+|++...... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC--HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 477888999999999999955 57889999998765432 2346788999999999999999999999865 4568
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeC-CCCceEEecccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLD-SEHEAHVSDFGI 911 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~ 911 (1031)
++||||+++++|.+++... ..+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999999764 3488899999999999999999999 7 99999999999998 789999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
+..... .......|++.|+|||++.+ .++.++||||+||++|+|++|+.||......... .........+.
T Consensus 179 ~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~-- 249 (290)
T 1t4h_A 179 ATLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI----YRRVTSGVKPA-- 249 (290)
T ss_dssp GGGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH----HHHHTTTCCCG--
T ss_pred cccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH----HHHHhccCCcc--
Confidence 976533 23355678999999998875 5899999999999999999999998754432111 11111111110
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+.+++.+||+.||++|||++|+++
T Consensus 250 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 250 ---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000111235788999999999999999999986
No 202
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=364.82 Aligned_cols=318 Identities=21% Similarity=0.200 Sum_probs=192.4
Q ss_pred eeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcC
Q 043316 178 LTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 257 (1031)
++.++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 16 v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 16 VLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 444444444 4444332 3455555555555544444555555555555555555544455555555555555555555
Q ss_pred CCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccc
Q 043316 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSI 337 (1031)
Q Consensus 258 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 337 (1031)
++..+..|.++++|++|+|++|++++..|..|.++++|+.|++++|.+++..|..|.++++|++|++++|.+++..+..+
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 172 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL 172 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHH
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHh
Confidence 55444455555555555555555555555555555666666666665555555555555566666666666655555566
Q ss_pred cccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccc
Q 043316 338 GNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLER 417 (1031)
Q Consensus 338 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 417 (1031)
..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|+.|++++|+++...+..|..+++|++
T Consensus 173 ~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 252 (477)
T 2id5_A 173 SHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRF 252 (477)
T ss_dssp TTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCE
T ss_pred cccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCe
Confidence 77777777777777777766667777777777777777766666655555556777777777776665566666666666
Q ss_pred eeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcc
Q 043316 418 LRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHI 497 (1031)
Q Consensus 418 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l 497 (1031)
|+|++|.+.++.+..|..+++|+.|+|++|++++ ..|..|..+++|+.|+|++|+|
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------------~~~~~~~~l~~L~~L~L~~N~l 308 (477)
T 2id5_A 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAV------------------------VEPYAFRGLNYLRVLNVSGNQL 308 (477)
T ss_dssp EECCSSCCCEECTTSCTTCTTCCEEECCSSCCSE------------------------ECTTTBTTCTTCCEEECCSSCC
T ss_pred eECCCCcCCccChhhccccccCCEEECCCCccce------------------------ECHHHhcCcccCCEEECCCCcC
Confidence 6666666666666666666666666666665554 3444555566666666666666
Q ss_pred cCCChhhhhccccCceeeccccccc
Q 043316 498 VGKIPVQFEKLFSLNKLILNLNQLS 522 (1031)
Q Consensus 498 ~~~~p~~~~~l~~L~~L~L~~N~l~ 522 (1031)
++..+..|..+++|+.|++++|.+.
T Consensus 309 ~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 309 TTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp SCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred ceeCHhHcCCCcccCEEEccCCCcc
Confidence 6655556666666666666666665
No 203
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.1e-37 Score=351.69 Aligned_cols=261 Identities=23% Similarity=0.332 Sum_probs=207.4
Q ss_pred HHHHHHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcC-CCCceeeee
Q 043316 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEI-RHRNIIKFH 825 (1031)
Q Consensus 752 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l-~h~niv~l~ 825 (1031)
.......++|.+.+.||+|+||.||+|... +|+.||||++...... ......+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334455678999999999999999999764 7999999998654311 1112256788999999999 799999999
Q ss_pred eeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceE
Q 043316 826 GFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAH 905 (1031)
Q Consensus 826 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 905 (1031)
+++...+..++||||+++++|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+|
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 9999999999999999999999999754 3588999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCCceeeccccCccccccccc------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH
Q 043316 906 VSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~ 979 (1031)
|+|||++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ...
T Consensus 241 l~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~--- 314 (365)
T 2y7j_A 241 LSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LML--- 314 (365)
T ss_dssp ECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---
T ss_pred EEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHH---
Confidence 9999999877543 23455679999999999864 35788999999999999999999998643321 111
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+.. ................+.+++.+||+.||++|||+.|+++
T Consensus 315 ~~i~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 315 RMIME---GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHH---TCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHh---CCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111 1111111111112235788999999999999999999986
No 204
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.6e-37 Score=337.31 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=197.1
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|.+.+.||+|+||.||+|... +++.||||++..... ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccc-cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 67999999999999999999664 799999999876432 2334567899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 99999999999997643 478899999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
. .......+++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+.... . .....+..... ..+..
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~---~~~~~~~~~~~-~~~~~--- 233 (276)
T 2h6d_A 164 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--P---TLFKKIRGGVF-YIPEY--- 233 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHHHCCC-CCCTT---
T ss_pred C-cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--H---HHHHHhhcCcc-cCchh---
Confidence 3 22345578999999999987765 6899999999999999999999865432 1 11122211111 11111
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.+++.+||+.||++|||++|+++
T Consensus 234 ---~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 234 ---LNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---cCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1135778899999999999999999986
No 205
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=346.70 Aligned_cols=250 Identities=26% Similarity=0.388 Sum_probs=201.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 46799999999999999999965 469999999986532 35678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++++|.+++... ...+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+....
T Consensus 102 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 99999999999998743 23588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChh
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRD 996 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1031)
..........|++.|+|||++.+..++.++||||+|+++|+|++|+.||....... ............... ..
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~-~~- 249 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-----AIFMIPTNPPPTFRK-PE- 249 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCCCCSS-GG-
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhcCCCcccCC-cc-
Confidence 54444455678999999999999889999999999999999999999987543311 111111111111111 11
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 997 VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 997 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.+++.+||+.||.+|||+.|+++
T Consensus 250 --~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 --LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11236788999999999999999999975
No 206
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=352.12 Aligned_cols=262 Identities=26% Similarity=0.359 Sum_probs=195.2
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHH--HHHHhcCCCCceeeeeeeEe-----c
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNE--VLALTEIRHRNIIKFHGFCS-----N 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E--i~~l~~l~h~niv~l~~~~~-----~ 830 (1031)
.++|++.+.||+|+||.||+|+. +++.||||++.... .+.+..| +..+..++||||+++++++. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 36899999999999999999976 78999999986532 2334444 44455689999999998653 2
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC------CCCeeeCCCCCCCeeeCCCCce
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC------LPPIVHGDISSKNVLLDSEHEA 904 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~ 904 (1031)
...+++||||+++|+|.++++... .++..+..++.||++||+|||+.+ .++|+||||||+||+++.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 346789999999999999997543 478899999999999999999863 2389999999999999999999
Q ss_pred EEeccccccccCCCC--------CCceeeccccCccccccccc-------cCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 905 HVSDFGIAKFLNPHS--------SNWTAFAGTFGYAAPEIAHM-------MRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 905 kl~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
||+|||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998764321 11234568999999999876 456789999999999999999977753222
Q ss_pred ccch-h------------hhhhHH-HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 970 TNFS-S------------FSNMIT-EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 970 ~~~~-~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
.... . ...... .......+.++............+.+++.+||+.||++|||++|+++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 1100 0 000000 011112222232222223344578899999999999999999999998863
No 207
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.2e-37 Score=365.93 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=203.4
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.++||+|+||+||+|.. .+++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH--BCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 46799999999999999999965 4799999999976432 22356789999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---CCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD---SEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~ 913 (1031)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||+++
T Consensus 99 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999999887543 588999999999999999999999 999999999999995 45679999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .... ..+... .....
T Consensus 173 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~---~~i~~~---~~~~~ 242 (486)
T 3mwu_A 173 CFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDIL---KRVETG---KYAFD 242 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHHT---CCCSC
T ss_pred ECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHH---HHHHhC---CCCCC
Confidence 76543 33455679999999999876 589999999999999999999999864432 1111 111111 11111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..........+.+++.+||+.||.+|||+.|+++
T Consensus 243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111122346778999999999999999999986
No 208
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-37 Score=364.45 Aligned_cols=194 Identities=23% Similarity=0.349 Sum_probs=155.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-----CC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN-----AQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-----~~ 832 (1031)
++|++.+.||+|+||+||+|.. .+++.||||++.... .+....+.+.+|+.++++++||||+++++++.. ..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 6799999999999999999954 579999999986542 233456789999999999999999999999843 35
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..|+||||++ ++|.++++... .+++.++..++.||+.||+|||+. |||||||||+||+++.++.+||+|||+|
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 7899999984 68999987643 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---------------------------CCceeeccccCccccccc-cccCCCccccchhhhHHHHHHHhC
Q 043316 913 KFLNPHS---------------------------SNWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKG 961 (1031)
Q Consensus 913 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~elltG 961 (1031)
+...... ...+..+||++|+|||++ .+..++.++||||+||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 8764321 123456789999999986 456799999999999999999993
No 209
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.5e-37 Score=361.08 Aligned_cols=198 Identities=25% Similarity=0.365 Sum_probs=168.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----Q 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~ 832 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.++++++||||+++++++... .
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 6799999999999999999954 578999999997542 2344567899999999999999999999999766 5
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..|+||||++ ++|.++++.. ..+++.++..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+|
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 7899999996 5999999764 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----------------------CceeeccccCccccccc-cccCCCccccchhhhHHHHHHHhCCCCC
Q 043316 913 KFLNPHSS----------------------NWTAFAGTFGYAAPEIA-HMMRATEKYDVHSFGVLALEVIKGNHPR 965 (1031)
Q Consensus 913 ~~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~elltG~~P~ 965 (1031)
+....... ..+..+||++|+|||++ .+..++.++||||+||++|||++|..||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 87653321 23567899999999986 5567999999999999999999866554
No 210
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.8e-37 Score=347.57 Aligned_cols=254 Identities=24% Similarity=0.384 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcE--EEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGII--FAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||.||+|+. .++.. +|+|+++... .....+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 6799999999999999999955 45664 4999886532 223456789999999999 899999999999999999
Q ss_pred EEEEEeccCCCchhhcccCC-------------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 835 FIVSEYLDRGSLTTILKDDA-------------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
++||||+++++|.+++.... ....+++.+++.++.|++.||+|||++ ||+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999997653 124689999999999999999999999 99999999999999999
Q ss_pred CceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHH
Q 043316 902 HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMIT 980 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 980 (1031)
+.+||+|||+++..... .......+++.|+|||++.+..++.++||||+||++|||++ |+.||...... ....
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~ 252 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYE 252 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----HHHH
Confidence 99999999999754321 12234456889999999998889999999999999999998 99998654321 1112
Q ss_pred HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 981 EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.+........+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 253 ~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 253 KLPQGYRLEKPLN------CDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HGGGTCCCCCCTT------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhhcCCCCCCCCC------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2222211111111 1235778999999999999999999999886
No 211
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.3e-37 Score=377.29 Aligned_cols=252 Identities=22% Similarity=0.313 Sum_probs=207.8
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|+. .+++.||||++++..... ....+.+.+|..++..+ +||+|+++++++.+.+.+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH-TTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc-HHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 457899999999999999999965 568999999998754322 34567788999999988 699999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
|+||||+++|+|.++++... .+++.++..++.||+.||+|||+. +||||||||+|||++.++++||+|||+|+.
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999999998643 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPS 994 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1031)
............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..+... ...++.
T Consensus 492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~---~~i~~~-~~~~p~-- 563 (674)
T 3pfq_A 492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELF---QSIMEH-NVAYPK-- 563 (674)
T ss_dssp CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH---HHHHSS-CCCCCT--
T ss_pred cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHH---HHHHhC-CCCCCc--
Confidence 54444445667899999999999999999999999999999999999999875432 1111 111111 111221
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHH
Q 043316 995 RDVMDKLMSIMEVAILCLVESPEARPTM-----KKVCN 1027 (1031)
Q Consensus 995 ~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~ 1027 (1031)
. ...++.++|.+||+.||++||++ +||++
T Consensus 564 -~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 564 -S---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -T---SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -c---CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1 12357789999999999999997 66653
No 212
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=371.70 Aligned_cols=253 Identities=24% Similarity=0.412 Sum_probs=206.3
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||.||+|.+..+..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++|
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 36788999999999999999988888889999997643 245689999999999999999999999876 678999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++|+|.++++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999997532 23588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCCh
Q 043316 918 HSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSR 995 (1031)
Q Consensus 918 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1031)
... ......++..|+|||++.++.++.++|||||||++|||++ |+.||...... .....+........+..
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~-- 488 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPE-- 488 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTT--
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCC--
Confidence 211 1223456788999999998899999999999999999999 99998654321 11122222111111111
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 996 DVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 996 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+.+++.+||+.||++|||+++|++.|++
T Consensus 489 ----~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 489 ----CPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 12357788999999999999999999999874
No 213
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-38 Score=353.65 Aligned_cols=257 Identities=22% Similarity=0.321 Sum_probs=203.8
Q ss_pred HhccCccceeecCCCccEEEEEe----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~ 832 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||+++...........+.+.+|+++++++ +||||+++++++.+++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999976 478999999997654333333455677899999999 6999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++||||+++++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999997643 588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC-CCceeeccccCcccccccccc--CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 913 KFLNPHS-SNWTAFAGTFGYAAPEIAHMM--RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 913 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
+.+.... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ........... ...
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~-~~~ 284 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKS-EPP 284 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHC-CCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHhcc-CCC
Confidence 8654322 223346799999999999863 478899999999999999999999864433211 11111111111 112
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARP-----TMKKVCNL 1028 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 1028 (1031)
.+.. ....+.+++.+||+.||++|| +++|+++.
T Consensus 285 ~~~~------~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 285 YPQE------MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCTT------SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCcc------cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 2211 123567889999999999999 99998763
No 214
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.3e-37 Score=368.20 Aligned_cols=253 Identities=23% Similarity=0.352 Sum_probs=206.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 36799999999999999999965 47999999999665432 23457889999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
||||+.+|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||++ +.++.+||+|||++.
T Consensus 104 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999999987653 488999999999999999999999 99999999999999 467899999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.+... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ... ..+... .....
T Consensus 178 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~---~~i~~~---~~~~~ 247 (484)
T 3nyv_A 178 HFEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DIL---KKVEKG---KYTFE 247 (484)
T ss_dssp HBCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHHC---CCCCC
T ss_pred Ecccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHH---HHHHcC---CCCCC
Confidence 77543 33455679999999999876 6899999999999999999999998754331 111 111111 11111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..........+.+++.+||+.||.+|||+.|+++
T Consensus 248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 1111122346788999999999999999999975
No 215
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=355.93 Aligned_cols=247 Identities=16% Similarity=0.130 Sum_probs=198.7
Q ss_pred HhccCccceeecCCCccEEEE------EeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC---CCceeeeeeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKA------ELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNIIKFHGFC 828 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~~~~ 828 (1031)
.++|.+.+.||+|+||+||+| ...+++.||||+++.. ....+.+|++++++++ |+||+++++++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 367999999999999999999 3457899999998653 3456778888888776 99999999999
Q ss_pred ecCCeeEEEEEeccCCCchhhcccCC--ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC------
Q 043316 829 SNAQHSFIVSEYLDRGSLTTILKDDA--AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS------ 900 (1031)
Q Consensus 829 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~------ 900 (1031)
...+..++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||++ |||||||||+||+++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcc
Confidence 99999999999999999999997532 234689999999999999999999999 9999999999999998
Q ss_pred -----CCceEEeccccccccCC--CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch
Q 043316 901 -----EHEAHVSDFGIAKFLNP--HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS 973 (1031)
Q Consensus 901 -----~~~~kl~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~ 973 (1031)
++.+||+|||+|+.+.. ........+||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 293 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce
Confidence 89999999999976532 22234556799999999999999999999999999999999999999753322110
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCC-CCHHHHHHHhh
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEAR-PTMKKVCNLLC 1030 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-ps~~evl~~L~ 1030 (1031)
. ......... . ...+.+++..|++.+|.+| |+++++.+.|+
T Consensus 294 ~-----------~~~~~~~~~--~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 294 K-----------PEGLFRRLP--H---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp E-----------ECSCCTTCS--S---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred e-----------echhccccC--c---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 0 111111111 1 2245677889999999998 67888777665
No 216
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.2e-37 Score=337.96 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=199.6
Q ss_pred HHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||+||+|... +++.||||++..... .......+.+|+..+.++ +||||+++++++.+++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA--GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT--TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc--ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 3478999999999999999999654 799999999876432 223467788999999999 899999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCc-cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC------------
Q 043316 835 FIVSEYLDRGSLTTILKDDAA-AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE------------ 901 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------------ 901 (1031)
++||||+++++|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 999999999999999976432 24589999999999999999999999 99999999999999844
Q ss_pred -------CceEEeccccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccch
Q 043316 902 -------HEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS 973 (1031)
Q Consensus 902 -------~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~ 973 (1031)
..+||+|||.+....... ...||+.|+|||++.+. .+++++||||+||++|||++|..|+....
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---- 235 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---- 235 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----
T ss_pred ccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----
Confidence 479999999998765432 34589999999998875 56789999999999999999987753221
Q ss_pred hhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 974 SFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.....+..+... ...+.+++.+||+.||++|||+.|+++
T Consensus 236 ----~~~~~~~~~~~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 ----QWHEIRQGRLPRIPQVL------SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HHHHHHTTCCCCCSSCC------CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHcCCCCCCCccc------CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11112222222222111 235778899999999999999999985
No 217
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=371.27 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=198.3
Q ss_pred cCccc-eeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 761 FGEKY-CIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 761 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
+.+.+ .||+|+||.||+|... ++..||||+++... .....+.+.+|++++++++|||||++++++.. +..++
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 34444 7999999999999653 46789999997642 23457889999999999999999999999987 56899
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 413 v~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EEECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 999999999999997542 4589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 917 PHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 917 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
..... .....+++.|+|||++.++.++.++|||||||++|||++ |+.||...... .. ...+........+.
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~---~~~i~~~~~~~~p~ 562 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EV---MAFIEQGKRMECPP 562 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HH---HHHHHTTCCCCCCT
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HH---HHHHHcCCCCCCCC
Confidence 33221 122345689999999998899999999999999999998 99998755432 11 12222221112221
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. ....+.+++.+||+.||++||++.+|++.|+
T Consensus 563 ~------~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 563 E------CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp T------CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred c------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 1236778999999999999999999999886
No 218
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.1e-37 Score=365.29 Aligned_cols=252 Identities=22% Similarity=0.318 Sum_probs=199.0
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||+||+|+. .+++.||||++...... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 46799999999999999999965 47899999999765422 2235678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~ 913 (1031)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.. +.+||+|||++.
T Consensus 114 v~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 999999999999887543 488899999999999999999999 99999999999999764 459999999998
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.. . .....
T Consensus 188 ~~~~~-~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~---~---~~~~~ 257 (494)
T 3lij_A 188 VFENQ-KKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEK---G---KYTFD 257 (494)
T ss_dssp ECBTT-BCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---T---CCCCC
T ss_pred ECCCC-ccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh---C---CCCCC
Confidence 77543 23455679999999999864 6899999999999999999999998754431 11111111 1 11111
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..........+.+++.+||+.||.+|||+.|+++
T Consensus 258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1111122336778999999999999999999875
No 219
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.4e-37 Score=365.87 Aligned_cols=255 Identities=23% Similarity=0.321 Sum_probs=202.3
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh---------hhcHHHHHHHHHHHhcCCCCceeeeee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE---------MADQDEFLNEVLALTEIRHRNIIKFHG 826 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~~~~~Ei~~l~~l~h~niv~l~~ 826 (1031)
..++|.+.++||+|+||+||+|.. .+++.||||++........ ....+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 347899999999999999999965 4689999999976542211 134678899999999999999999999
Q ss_pred eEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---c
Q 043316 827 FCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH---E 903 (1031)
Q Consensus 827 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~ 903 (1031)
++.+++..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999999987643 489999999999999999999999 999999999999999776 6
Q ss_pred eEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 904 AHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 904 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
+||+|||++...... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~--- 260 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVE--- 260 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH---
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH---
Confidence 999999999877543 33455679999999999874 6899999999999999999999998754331 1111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. ................+.+++.+||+.||.+|||++|+++
T Consensus 261 ~---~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 261 K---GKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp H---CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c---CCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1 1111111111122346788999999999999999999975
No 220
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.2e-37 Score=345.51 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=201.1
Q ss_pred hccCccceeecCCCccEEEEEe------CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL------PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
++|++.+.||+|+||.||+|+. .+++.||||++.... .......+.+|+.++++++||||+++++++.+.+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 6799999999999999999973 357799999996532 2234667899999999999999999999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCc----cccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceE
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAA----AKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAH 905 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~k 905 (1031)
..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.+ ..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999976532 13588999999999999999999999 99999999999999944 4699
Q ss_pred EeccccccccCCCCC--CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHh
Q 043316 906 VSDFGIAKFLNPHSS--NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEI 982 (1031)
Q Consensus 906 l~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~ 982 (1031)
|+|||++........ ......+++.|+|||++.+..++.++||||+||++|||+| |+.||...... . ....+
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~---~~~~~ 258 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E---VLEFV 258 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H---HHHHH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--H---HHHHH
Confidence 999999986533221 2234567889999999998899999999999999999998 99997654321 1 11111
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 983 NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
........+.. ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus 259 ~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 259 TSGGRMDPPKN------CPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HTTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hcCCCCCCCCC------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11111111111 1235778999999999999999999999875
No 221
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.2e-37 Score=351.77 Aligned_cols=254 Identities=25% Similarity=0.381 Sum_probs=202.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 6799999999999999999965 478999999987642 223467889999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ||+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999997643 4888999999999999999999832 899999999999999999999999999976532
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhh---------------------
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS--------------------- 976 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~--------------------- 976 (1031)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...........
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 22345789999999999999999999999999999999999999875433211000
Q ss_pred ----------------hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 977 ----------------NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 977 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...........+..+. . .....+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS---G--VFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCT---T--TSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCc---c--cccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0001111111111110 0 01235788999999999999999999975
No 222
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-37 Score=350.63 Aligned_cols=255 Identities=20% Similarity=0.293 Sum_probs=194.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----- 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----- 832 (1031)
++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.++++++||||+++++++...+
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 5799999999999999999965 579999999986543 22344678899999999999999999999997653
Q ss_pred -eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 -HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..|+||||+ +++|.++++.. .+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 78999998753 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT---------- 980 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~---------- 980 (1031)
++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.....
T Consensus 175 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 175 ARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp CEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHH
T ss_pred cccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHH
Confidence 987643 2345678999999999877 678999999999999999999999987544311 1111000
Q ss_pred ---------HhhhhcCCCCCCC-ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 ---------EINQNLDHRLPTP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 ---------~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+...... ..........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000011000000 0000111235788999999999999999999986
No 223
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=356.84 Aligned_cols=257 Identities=17% Similarity=0.249 Sum_probs=201.8
Q ss_pred hccCccceeecCCCccEEEEEeC---------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceee------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP---------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIK------ 823 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~------ 823 (1031)
++|.+.+.||+|+||.||+|... +++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 57999999999999999999765 3789999998643 35678999999999999988
Q ss_pred ---------eeeeEec-CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCC
Q 043316 824 ---------FHGFCSN-AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISS 893 (1031)
Q Consensus 824 ---------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 893 (1031)
+++++.. ++..++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||++ ||+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 5677765 78889999999 999999998652 24689999999999999999999999 999999999
Q ss_pred CCeeeCCCC--ceEEeccccccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCC
Q 043316 894 KNVLLDSEH--EAHVSDFGIAKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 894 ~NIll~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P 964 (1031)
+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998 899999999987643221 12345789999999999998999999999999999999999999
Q ss_pred CCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 965 RDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
|.......................... ...........+.+++.+||+.||++|||++|+++.|+
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKPGPFVG-PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSCCCEEC-TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccCCcCHHHHHHHHHhccCChhhhhh-hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 876543333333222222221111111 00000011236788999999999999999999999986
No 224
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.2e-37 Score=336.46 Aligned_cols=245 Identities=21% Similarity=0.362 Sum_probs=201.1
Q ss_pred HHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----- 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----- 830 (1031)
...+|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 3468999999999999999999664 79999999986532 245689999999999999999998854
Q ss_pred -----------CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC
Q 043316 831 -----------AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD 899 (1031)
Q Consensus 831 -----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 899 (1031)
....++||||+++++|.+++.... ...+++..++.++.|++.||+|||+. ||+||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 455899999999999999997543 24588999999999999999999999 999999999999999
Q ss_pred CCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH
Q 043316 900 SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 900 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~ 979 (1031)
.++.+||+|||++....... ......+++.|+|||++.+..++.++||||+|+++|||++|..|+.... ...
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~ 228 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFF 228 (284)
T ss_dssp ETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHH
T ss_pred CCCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHH
Confidence 99999999999998765432 2345678999999999999889999999999999999999998843111 111
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
..... ..++... ...+.+++.+||+.||++|||+.|+++.|+
T Consensus 229 ~~~~~---~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 229 TDLRD---GIISDIF------DKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HHHHT---TCCCTTS------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhc---ccccccC------CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111 1111111 124678899999999999999999999875
No 225
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=7.7e-37 Score=338.88 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=200.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeE--ecCCee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC--SNAQHS 834 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~--~~~~~~ 834 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++............+.+.+|++++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999965 578999999998765443344577899999999999999999999998 445688
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||||++++ +.+++.... ...+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999876 767765543 34689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--CceeeccccCccccccccccC--CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSS--NWTAFAGTFGYAAPEIAHMMR--ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
...... ......|++.|+|||++.+.. ++.++||||+|+++|||++|+.||..... .. ....+... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~---~~~~i~~~-~~~~ 232 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YK---LFENIGKG-SYAI 232 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HH---HHHHHHHC-CCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HH---HHHHHhcC-CCCC
Confidence 653222 223456899999999987644 37799999999999999999999875432 11 11111111 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+.. ....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~------~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 233 PGD------CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CSS------SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCc------cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 1235678899999999999999999986
No 226
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.7e-37 Score=339.01 Aligned_cols=255 Identities=17% Similarity=0.217 Sum_probs=200.8
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeE-ecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC-SNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~-~~~~~~~ 835 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.+++.++|++++..++++ .+.+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS------SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc------chhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 36799999999999999999965 689999999986543 234578999999999988766666555 6678889
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---CCCceEEeccccc
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD---SEHEAHVSDFGIA 912 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a 912 (1031)
+||||+ +++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 899999997433 3589999999999999999999999 999999999999994 7889999999999
Q ss_pred cccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc-hhhhhhHHHhhh
Q 043316 913 KFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF-SSFSNMITEINQ 984 (1031)
Q Consensus 913 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~-~~~~~~~~~~~~ 984 (1031)
........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ......+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc
Confidence 87654332 1245678999999999999899999999999999999999999987543321 111111111111
Q ss_pred hcC-CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 985 NLD-HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 985 ~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
... ..... .....+.+++.+||+.||++|||++|+++.|+
T Consensus 236 ~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 236 STPIEVLCK------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HSCHHHHTT------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred CCchHHHHh------hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 100 00000 01235788999999999999999999999986
No 227
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.7e-37 Score=347.77 Aligned_cols=260 Identities=20% Similarity=0.298 Sum_probs=200.4
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec------
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN------ 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------ 830 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .......+.+|+.++++++||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC--SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc--cccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 36899999999999999999965 6799999999866532 22335678899999999999999999999977
Q ss_pred --CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 831 --AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 831 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
.+..++||||+++ ++.+.+.... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred cCCceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEcc
Confidence 4568999999985 7777765542 3589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCC----CCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 909 FGIAKFLNPHS----SNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 909 fg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||+++.+.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+....
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~ 245 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLC 245 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHH
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHh
Confidence 99998764321 22345678999999999876 45799999999999999999999998754331 1111111111
Q ss_pred hhcCCCCC----------------CCChhHHHH------HHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLP----------------TPSRDVMDK------LMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~----------------~~~~~~~~~------~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ .......+. ...+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 11111110 000111111 234789999999999999999999985
No 228
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.2e-37 Score=339.41 Aligned_cols=257 Identities=16% Similarity=0.211 Sum_probs=198.0
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeE-ecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFC-SNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~-~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++.++|++++..++++ .+....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc------cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 347899999999999999999964 679999999875543 123477899999999988776666655 677888
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGI 911 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~ 911 (1031)
++||||+ +++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 9999999 899999997542 3589999999999999999999999 99999999999999 7889999999999
Q ss_pred ccccCCCCC-------CceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch-hhhhhHHHhh
Q 043316 912 AKFLNPHSS-------NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS-SFSNMITEIN 983 (1031)
Q Consensus 912 a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~-~~~~~~~~~~ 983 (1031)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..........
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 234 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc
Confidence 987654322 12356789999999999999999999999999999999999999875443211 1111111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...+ .. .........+.+++.+||+.||++|||++|+++.|+
T Consensus 235 ~~~~--~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 235 MSTP--IE---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHSC--HH---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred ccch--hh---hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 1100 00 000001236788999999999999999999999886
No 229
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=347.19 Aligned_cols=257 Identities=20% Similarity=0.311 Sum_probs=200.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe----cCC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS----NAQ 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~----~~~ 832 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 36799999999999999999965 679999999986532 245678899999999999999999999986 345
Q ss_pred eeEEEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 7899999999999999997531 234589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC---------ceeeccccCccccccccccC---CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH
Q 043316 912 AKFLNPHSSN---------WTAFAGTFGYAAPEIAHMMR---ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI 979 (1031)
Q Consensus 912 a~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~ 979 (1031)
+......... .....||+.|+|||++.+.. ++.++||||+||++|||++|+.||+.............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 8765321111 12345699999999987543 68899999999999999999999854222111111111
Q ss_pred HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 980 TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. .. ...+... .....+.+++.+||+.||.+|||++|+++.|+
T Consensus 261 ~---~~--~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 261 Q---NQ--LSIPQSP----RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp H---CC----CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred h---cc--CCCCccc----cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 1 11 1111111 11236788999999999999999999999986
No 230
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1e-37 Score=345.34 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=197.4
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC----HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 67999999999999999999664 68999999986542 34577899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ..+++.++..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999987532 3588999999999999999999999 999999999999999999999999999864322
Q ss_pred CCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCC
Q 043316 918 HSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPT 992 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1031)
.........|++.|+|||++. +..++.++||||+|+++|||++|+.||...... ...........+....
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 244 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLKIAKSDPPTLLT 244 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCSS
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHHHHhccCCcccCC
Confidence 111223457899999999983 567889999999999999999999998754431 1111111111111111
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 993 PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 993 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .....+.+++.+||+.||++|||+.|+++
T Consensus 245 -~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 -PS---KWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -GG---GSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -cc---ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11 11236788999999999999999999975
No 231
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.7e-37 Score=339.66 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=201.3
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc----ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 46799999999999999999965 479999999987543 1234568899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
||||+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999999987543 488899999999999999999999 99999999999999 788899999999997
Q ss_pred ccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCC
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTP 993 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1031)
.... .......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ... ...+...........
T Consensus 158 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~---~~~i~~~~~~~~~~~ 230 (304)
T 2jam_A 158 MEQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKL---FEKIKEGYYEFESPF 230 (304)
T ss_dssp CCCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHH---HHHHHHCCCCCCTTT
T ss_pred ecCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHH---HHHHHcCCCCCCccc
Confidence 6432 223455789999999999998999999999999999999999999864432 111 111111111110110
Q ss_pred ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 994 SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 994 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. .....+.+++.+||+.||++|||++|+++
T Consensus 231 ~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 231 WD---DISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TT---TSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cc---cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01 11236778999999999999999999975
No 232
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.2e-37 Score=347.62 Aligned_cols=256 Identities=21% Similarity=0.276 Sum_probs=191.9
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC-----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ----- 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----- 832 (1031)
++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC--ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 6799999999999999999954 5789999999875432 2334677889999999999999999999997664
Q ss_pred -eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 833 -HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 833 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
..++||||+++ +|.+++.. .+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 78777753 378899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE---------- 981 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~---------- 981 (1031)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .+......
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHHT
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 9876432 22345678999999999999899999999999999999999999987544311 11110000
Q ss_pred -----hhhh--cCCC--------------CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 -----INQN--LDHR--------------LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 -----~~~~--~~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... ..+. .+............+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000 0000 01111111222457889999999999999999999986
No 233
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.2e-37 Score=339.18 Aligned_cols=262 Identities=21% Similarity=0.284 Sum_probs=202.5
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYL 79 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc--chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEE
Confidence 36799999999999999999965 4799999999866432 22335678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
||||++ ++|.+++.... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+....
T Consensus 80 v~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 80 VFEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154 (299)
T ss_dssp EEECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred EEEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence 999997 69999987653 23578899999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh-----------
Q 043316 917 PHSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ----------- 984 (1031)
Q Consensus 917 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~----------- 984 (1031)
..........+|+.|+|||++.+.. ++.++||||+||++|||++|+.||....... ...........
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (299)
T 2r3i_A 155 VPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTS 233 (299)
T ss_dssp CCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGG
T ss_pred CCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhc
Confidence 4444445567899999999988765 7899999999999999999999987554321 11111111100
Q ss_pred --hcCCCCCCCCh-hH----HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 --NLDHRLPTPSR-DV----MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 --~~~~~~~~~~~-~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......+.... .. .....++.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00001110000 00 011246788999999999999999999986
No 234
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.1e-37 Score=343.78 Aligned_cols=256 Identities=24% Similarity=0.293 Sum_probs=197.5
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA 831 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 831 (1031)
..++|.+.+.||+|+||.||+|.. .+++.||||++...... .+......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 346899999999999999999955 56899999998764321 1122345688999999999999999999999776
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEec
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVSD 908 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~D 908 (1031)
. .++||||+++++|.+++.... .+++.++..++.||+.||+|||++ ||+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 799999999999999987643 588999999999999999999999 9999999999999987665 99999
Q ss_pred cccccccCCCCCCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
||++...... .......||+.|+|||++. +..++.++||||+||++|||++|+.||........ ....+...
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~--- 235 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSG--- 235 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHHHT---
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHHhC---
Confidence 9999876432 2233457899999999974 45688999999999999999999999875443211 11111111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.....+.........+.+++.+||+.||++|||+.|+++
T Consensus 236 ---~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 ---KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp ---CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---ccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 111111111112346788999999999999999999975
No 235
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.1e-38 Score=358.97 Aligned_cols=244 Identities=15% Similarity=0.112 Sum_probs=189.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHH---HHHhcCCCCceeeee-------ee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEV---LALTEIRHRNIIKFH-------GF 827 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei---~~l~~l~h~niv~l~-------~~ 827 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|+ +.+++++|||||+++ ++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 5788999999999999999975 57999999999754321 223467889999 455566899999998 66
Q ss_pred EecCC-----------------eeEEEEEeccCCCchhhcccCCcc----ccCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 043316 828 CSNAQ-----------------HSFIVSEYLDRGSLTTILKDDAAA----KEFGWNQRMNVIKGVANALSYLHHDCLPPI 886 (1031)
Q Consensus 828 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 886 (1031)
+.+.+ ..|+||||+ +|+|.+++...... ..+++..++.++.||+.||+|||++ ||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 66553 278999999 68999999764221 1244588889999999999999999 99
Q ss_pred eeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeeccccCcccccccccc-----------CCCccccchhhhHHH
Q 043316 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-----------RATEKYDVHSFGVLA 955 (1031)
Q Consensus 887 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslG~il 955 (1031)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 9999999999999999999999999986432 3345567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 956 LEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 956 ~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
|||++|+.||........ . .. .....+.. ...+.+++.+||+.||++|||+.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~~-~----~~----~~~~~~~~-------~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALGG-S----EW----IFRSCKNI-------PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------CC-S----GG----GGSSCCCC-------CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCcccccccc-h----hh----hhhhccCC-------CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999864432110 0 00 01111111 135778899999999999999999985
No 236
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.8e-37 Score=371.28 Aligned_cols=246 Identities=25% Similarity=0.369 Sum_probs=196.6
Q ss_pred ceeecCCCccEEEEEe---CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEEEEec
Q 043316 765 YCIGKGRQGSVYKAEL---PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
+.||+|+||.||+|.+ .+++.||||+++.... +....+.+.+|++++++++|||||++++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG--CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 4799999999999944 3468899999976532 23456789999999999999999999999975 4578999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCC-
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSS- 920 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 920 (1031)
++|+|.++++.. ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 452 ~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999999754 3588999999999999999999999 999999999999999999999999999987654332
Q ss_pred --CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 921 --NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 921 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... . ....+........+..
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~---~~~~i~~~~~~~~p~~---- 596 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--E---VTAMLEKGERMGCPAG---- 596 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--H---HHHHHHTTCCCCCCTT----
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHHHHHcCCCCCCCCC----
Confidence 1233456789999999999999999999999999999998 99998754431 1 1122222222222211
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...++.+++.+||+.||++|||+++|++.|+
T Consensus 597 --~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 597 --CPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp --CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1236778999999999999999999999986
No 237
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.9e-37 Score=341.30 Aligned_cols=255 Identities=27% Similarity=0.428 Sum_probs=194.5
Q ss_pred hccCccceeecCCCccEEEEEeC--CCc--EEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--SGI--IFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 834 (1031)
++|++.+.||+|+||+||+|++. +++ .||||+++..... .....+.+.+|++++++++||||+++++++.++. .
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 67999999999999999999642 333 6899998764322 2345678999999999999999999999998765 7
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++|+||+++++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 99999999999999997642 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
....... .....++..|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+... ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~-~~~~ 244 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILHKIDKE-GERL 244 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTS-CCCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HHHHHHHcc-CCCC
Confidence 7543321 223456788999999998889999999999999999999 99998654331 111111111 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
+.. . .....+.+++.+||+.||++|||+.|+++.|+
T Consensus 245 ~~~-~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 245 PRP-E---DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCC-T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-c---CcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 111 1 11236788999999999999999999999886
No 238
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.7e-37 Score=348.54 Aligned_cols=254 Identities=21% Similarity=0.323 Sum_probs=182.2
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------ 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 831 (1031)
++|++.+.||+|+||.||+|. ..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 679999999999999999995 4679999999986542 2234567888999999999999999999998654
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
...++|+||+ +++|.++++. ..+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5679999999 6899998875 3488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH---------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE--------- 981 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~--------- 981 (1031)
++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 179 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 179 ARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELL 254 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHH
T ss_pred cccccc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 987543 2345678999999999877 678999999999999999999999987554311 11111000
Q ss_pred ----------hhhhcCCCCCCCChh--HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 ----------INQNLDHRLPTPSRD--VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ----------~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...... ..+..... .......+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 255 KKISSESARNYIQSLT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TTCCCHHHHHHHHTSC-CCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhhHHHHHHHhccC-CCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000000 00100000 0011235789999999999999999999975
No 239
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=342.25 Aligned_cols=259 Identities=22% Similarity=0.347 Sum_probs=204.0
Q ss_pred HhccCccceeecCCCccEEEEEe-----CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-----PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 832 (1031)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 36789999999999999999973 468999999987632 234678999999999999999999999986654
Q ss_pred --eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 833 --HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 833 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
..++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 7899999999999999997653 3588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC---ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh----------h-h
Q 043316 911 IAKFLNPHSSN---WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS----------F-S 976 (1031)
Q Consensus 911 ~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~----------~-~ 976 (1031)
++......... .....++..|+|||.+.+..++.++||||+|+++|||+||..||......... . .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 99877543321 12345677899999999888999999999999999999999986533111000 0 0
Q ss_pred hhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 977 NMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
..............+. . ...++.+++.+||+.||++|||+.|+++.|++
T Consensus 271 ~~~~~~~~~~~~~~~~---~---~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPD---G---CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp HHHHHHHTTCCCCCCT---T---CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCC---c---ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 0111111111111111 1 12367889999999999999999999999863
No 240
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=344.93 Aligned_cols=252 Identities=25% Similarity=0.375 Sum_probs=195.3
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEec----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSN---- 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~---- 830 (1031)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 457799999999999999999965 579999999986532 2356788999999998 79999999999976
Q ss_pred --CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEec
Q 043316 831 --AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSD 908 (1031)
Q Consensus 831 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 908 (1031)
.+..++||||+++++|.+++.... ...+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 567899999999999999997653 34688999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
||++..............|++.|+|||++. +..++.++||||+||++|+|++|+.||....... ......
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~ 247 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----ALFLIP 247 (326)
T ss_dssp CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHH
T ss_pred CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-----HHHHhh
Confidence 999987654433345567899999999986 5678899999999999999999999986543311 111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+..... .....+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 248 RNPAPRLKSK-----KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HSCCCCCSCS-----CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCccccCCcc-----ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111111110 11236778999999999999999999986
No 241
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-36 Score=340.94 Aligned_cols=252 Identities=18% Similarity=0.276 Sum_probs=199.2
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEec--CCee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSN--AQHS 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~--~~~~ 834 (1031)
++|++.+.||+|+||+||+|. ..+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.+ ....
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 679999999999999999995 467999999998643 3567889999999997 9999999999987 6778
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC-ceEEecccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH-EAHVSDFGIAK 913 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~ 913 (1031)
++||||+++++|.++++. +++.++..++.|++.||+|||+. ||+||||||+||+++.++ .+||+|||+++
T Consensus 109 ~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 999999999999998853 77889999999999999999999 999999999999999777 89999999998
Q ss_pred ccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh--------h
Q 043316 914 FLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN--------Q 984 (1031)
Q Consensus 914 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~--------~ 984 (1031)
...... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.................. .
T Consensus 180 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 180 FYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp ECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 765432 3355678999999999877 66899999999999999999999998544332222211111000 0
Q ss_pred hcCCCCCC------------------CChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 NLDHRLPT------------------PSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ~~~~~~~~------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ ...........+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000 00000001346789999999999999999999986
No 242
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.3e-37 Score=344.64 Aligned_cols=259 Identities=26% Similarity=0.384 Sum_probs=185.2
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 46799999999999999999965 4789999999865432 2345678899999999999999999999999999999
Q ss_pred EEEeccCCCchhhcccC-----CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 837 VSEYLDRGSLTTILKDD-----AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
||||+++++|.+++... .....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 99999999999998642 1234589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-----CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 912 AKFLNPHSS-----NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 912 a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
+........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......... ... ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~-~~ 242 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM----LTL-QN 242 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH----HHH-TS
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH----HHh-cc
Confidence 987643221 1234578999999999876 568999999999999999999999987554321111 010 11
Q ss_pred cCCCCCCCC---hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPS---RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+...... .........+.+++.+||+.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111100000 000011235778999999999999999999985
No 243
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.8e-37 Score=338.69 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=187.6
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+.++...++.++||||+++++++.+++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 36799999999999999999965 5799999999976532 12233444555566888899999999999999999999
Q ss_pred EEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||++ |+|.+++... .....+++..++.++.|++.||+|||+++ ||+||||||+||+++.++.+||+|||++...
T Consensus 84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999997 5887777542 12346899999999999999999999852 8999999999999999999999999999876
Q ss_pred CCCCCCceeeccccCccccccc----cccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIA----HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
.... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||+.............. ......+
T Consensus 161 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~ 235 (290)
T 3fme_A 161 VDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----EPSPQLP 235 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH----SCCCCCC
T ss_pred cccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc----cCCCCcc
Confidence 4432 23445789999999996 5567899999999999999999999998754433222222111 1111111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
. . .....+.+++.+||+.||++|||++|+++
T Consensus 236 ~--~---~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 A--D---KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp T--T---TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c--c---cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1 1 11235788999999999999999999975
No 244
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.1e-37 Score=346.01 Aligned_cols=258 Identities=21% Similarity=0.347 Sum_probs=204.7
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhh-------------hcHHHHHHHHHHHhcCCCCceeee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEM-------------ADQDEFLNEVLALTEIRHRNIIKF 824 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-------------~~~~~~~~Ei~~l~~l~h~niv~l 824 (1031)
.++|.+.+.||+|+||.||+|.. +++.||||++......... ...+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36799999999999999999988 9999999999765432111 012789999999999999999999
Q ss_pred eeeEecCCeeEEEEEeccCCCchhh------cccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCee
Q 043316 825 HGFCSNAQHSFIVSEYLDRGSLTTI------LKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVL 897 (1031)
Q Consensus 825 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIl 897 (1031)
++++.+.+..++||||+++++|.++ +.... ...+++..++.++.|++.||+|||+ . ||+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999999 54421 3568999999999999999999999 8 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCCceeeccccCcccccccccc-CCCc-cccchhhhHHHHHHHhCCCCCCCcCccchhh
Q 043316 898 LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATE-KYDVHSFGVLALEVIKGNHPRDYVSTNFSSF 975 (1031)
Q Consensus 898 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwslG~il~elltG~~P~~~~~~~~~~~ 975 (1031)
++.++.+||+|||.+...... ......+++.|+|||++.+. .++. ++||||+||++|||++|+.||........ .
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~ 261 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE-L 261 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH-H
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-H
Confidence 999999999999999876432 33456789999999999877 5665 99999999999999999999875543211 1
Q ss_pred hhhHHHhhhhcCCCCCCCC-------------hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 976 SNMITEINQNLDHRLPTPS-------------RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+... ....+... .........+.+++.+||+.||.+|||++|+++
T Consensus 262 ---~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 ---FNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ---HHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---HHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111 01111000 000112236788999999999999999999986
No 245
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.4e-37 Score=337.35 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=203.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhh-----hhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLL-----FDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~ 830 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .......+.+.+|+.+++++. ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 47899999999999999999965 4789999999865421 111223567889999999996 9999999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccc
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFG 910 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 910 (1031)
.+..++||||+++++|.+++... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999764 3588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCcccccccc------ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhh
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAH------MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQ 984 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~ 984 (1031)
.+....... ......+++.|+|||++. ...++.++||||+|+++|||++|+.||...... ... ..+..
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~---~~~~~ 243 (298)
T 1phk_A 170 FSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LML---RMIMS 243 (298)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHH
T ss_pred chhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHH---HHHhc
Confidence 998765432 334567899999999985 346788999999999999999999998644321 111 11111
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.. ...+. .........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~-~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GN-YQFGS--PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TC-CCCCT--TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CC-cccCc--ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11 11111 111122346788999999999999999999975
No 246
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-36 Score=349.67 Aligned_cols=310 Identities=21% Similarity=0.280 Sum_probs=212.7
Q ss_pred CCCcccEEecCCCcCcCCCccc-cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCce
Q 043316 99 SFPHLMYLNLSCNVLYGNIPPQ-ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINV 177 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 177 (1031)
.++++++|++++|.++ .+|+. +..+++|++|+|++|.+++..|..++.+++|++|+|++|++++..|..++++++|++
T Consensus 43 ~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 4688999999999987 45554 688999999999999998777778999999999999999998777778899999999
Q ss_pred eeccCcccCCCCCCc-ccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 178 LTLCHNNFSGRIPPS-LGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
|+|++|.++ .+|.. |+++++|++|++++|++++..|..|+++++|++|++++|++++. .+..+++|+.|++++|.
T Consensus 122 L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 122 LVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNL 197 (390)
T ss_dssp EECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSC
T ss_pred EECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccc
Confidence 999999988 55554 68899999999999998877777888888999999999888853 35667888888888887
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 336 (1031)
+++. ...++|++|++++|+++.. |.. ..++|+.|++++|++++. ..+.++++|++|++++|.+++..|..
T Consensus 198 l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~ 267 (390)
T 3o6n_A 198 LSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHP 267 (390)
T ss_dssp CSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGG
T ss_pred cccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhH
Confidence 7642 3345778888888877643 322 235677777777776642 34444555555555555555444444
Q ss_pred ccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccc
Q 043316 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 416 (1031)
|+.+++|++|+|++|++++ +|..+..+++|++|++++|++.++ |..+..+++|+
T Consensus 268 ~~~l~~L~~L~L~~n~l~~-------------------------~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~ 321 (390)
T 3o6n_A 268 FVKMQRLERLYISNNRLVA-------------------------LNLYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLE 321 (390)
T ss_dssp GTTCSSCCEEECCSSCCCE-------------------------EECSSSCCTTCCEEECCSSCCCCC-GGGHHHHTTCS
T ss_pred ccccccCCEEECCCCcCcc-------------------------cCcccCCCCCCCEEECCCCcceec-CccccccCcCC
Confidence 5555555555555555443 233334444455555555544432 33344455555
Q ss_pred ceeccccccccccccccCCCCCCCeeccccccccCc
Q 043316 417 RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGE 452 (1031)
Q Consensus 417 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 452 (1031)
+|++++|++..+. +..+++|+.|++++|++.+.
T Consensus 322 ~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 322 NLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp EEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred EEECCCCccceeC---chhhccCCEEEcCCCCccch
Confidence 5555555554442 44556666777777766654
No 247
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=345.87 Aligned_cols=250 Identities=20% Similarity=0.278 Sum_probs=184.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEe-------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCS------- 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~------- 829 (1031)
.+|++.++||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 5799999999999999999965 579999999985542 234667899999999996 999999999984
Q ss_pred -cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eeeCCCCCCCeeeCCCCceEE
Q 043316 830 -NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPP--IVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 830 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl 906 (1031)
.....++||||++ |+|.+++........+++.+++.++.||+.||+|||+. + |+||||||+||+++.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3455899999996 79999887644445689999999999999999999999 8 999999999999999999999
Q ss_pred eccccccccCCCCCC------------ceeeccccCccccccc---cccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 907 SDFGIAKFLNPHSSN------------WTAFAGTFGYAAPEIA---HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
+|||+++........ .....+|+.|+|||++ .+..++.++||||+||++|||++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999876543221 1134589999999998 5667899999999999999999999998643321
Q ss_pred chhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 972 FSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
. ... ........... ...+.+++.+||+.||++|||+.|+++.|+
T Consensus 260 ~-----~~~---~~~~~~~~~~~------~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 260 R-----IVN---GKYSIPPHDTQ------YTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp --------------CCCCTTCCS------SGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred H-----hhc---CcccCCccccc------chHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0 001 11111111111 123667899999999999999999999886
No 248
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-36 Score=367.97 Aligned_cols=351 Identities=18% Similarity=0.197 Sum_probs=232.8
Q ss_pred CccCCCCCCCCCCCCCCCCc----cceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccc
Q 043316 47 SLLSSWTLYPANATKISPCT----WFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQIS 122 (1031)
Q Consensus 47 ~~~~sw~~~~~~~~~~~~C~----w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~ 122 (1031)
..+++|. ++.+||. |.++.|+. +| +.........++ -..+++++.|++++|.+.+..+..+.
T Consensus 7 ~~l~~~~------~~~~C~~~~~~~~c~~~~~--~i---~~~~~~~~~~~~---~l~l~~l~~l~l~~~~l~~lp~~~~~ 72 (597)
T 3oja_B 7 YNVKPRQ------PEYKCIDSNLQYDCVFYDV--HI---DMQTQDVYFGFE---DITLNNQKIVTFKNSTMRKLPAALLD 72 (597)
T ss_dssp ----CCC------SEECCCCC--CCSEEECSC--EE---CSSCCCCEESCS---SGGGCCCSEEEESSCEESEECTHHHH
T ss_pred ccccCCC------CCCcCcccCcCceeEecCc--ee---cccccccccCcc---cccCCCceEEEeeCCCCCCcCHHHHc
Confidence 3477887 5667773 77777753 11 111111111121 22467889999999998754444578
Q ss_pred cCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 123 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 89999999999999998777889999999999999999997777778999999999999999985444456889999999
Q ss_pred EecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc
Q 043316 203 YLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282 (1031)
Q Consensus 203 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 282 (1031)
+|++|.+++..|..|+++++|++|+|++|++++. + ++.+++|+.|++++|.+++. ...++|+.|++++|.++
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~--~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~ 224 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSIN 224 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-C--GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCC
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-C--hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccc
Confidence 9999999887788888889999999999988853 2 56677888888888877642 33456778888888776
Q ss_pred ccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccC
Q 043316 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIG 362 (1031)
Q Consensus 283 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 362 (1031)
...+ .+ .++|+.|+|++|.+++ +..++. +++|++|+|++|.+++..|..|+
T Consensus 225 ~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~------------------------l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 225 VVRG-PV--NVELTILKLQHNNLTD--TAWLLN------------------------YPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp EEEC-SC--CSCCCEEECCSSCCCC--CGGGGG------------------------CTTCSEEECCSSCCCEEESGGGT
T ss_pred cccc-cc--CCCCCEEECCCCCCCC--Chhhcc------------------------CCCCCEEECCCCccCCCCHHHhc
Confidence 4322 22 2466677777766664 234444 44555555555555544444555
Q ss_pred cccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCee
Q 043316 363 YLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFL 442 (1031)
Q Consensus 363 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 442 (1031)
.+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+.. +|..+..+++|++|++++|.+.+++ +..+++|+.|
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L 350 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNL 350 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEE
T ss_pred CccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEE
Confidence 55555555555555543 23344445555555555555553 2344455555666666666555443 4556778888
Q ss_pred ccccccccCcc
Q 043316 443 DLSQNNLYGEI 453 (1031)
Q Consensus 443 ~Ls~N~l~~~~ 453 (1031)
++++|++.+..
T Consensus 351 ~l~~N~~~~~~ 361 (597)
T 3oja_B 351 TLSHNDWDCNS 361 (597)
T ss_dssp ECCSSCEEHHH
T ss_pred EeeCCCCCChh
Confidence 88888877643
No 249
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.7e-37 Score=352.23 Aligned_cols=254 Identities=10% Similarity=0.017 Sum_probs=182.1
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHH---HHHhcCCCCceeeee-------ee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEV---LALTEIRHRNIIKFH-------GF 827 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei---~~l~~l~h~niv~l~-------~~ 827 (1031)
.+|.+.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|+ ..++. +||||++++ ++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 4588999999999999999965 57999999999775421 233456777884 45555 799988755 44
Q ss_pred EecC-----------------CeeEEEEEeccCCCchhhcccCCccccCCHHHH------HHHHHHHHHHHHHhhhCCCC
Q 043316 828 CSNA-----------------QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQR------MNVIKGVANALSYLHHDCLP 884 (1031)
Q Consensus 828 ~~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~ 884 (1031)
+... ...++||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 4433 33799999998 899999986532 2344555 67889999999999999
Q ss_pred CeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCC
Q 043316 885 PIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGN 962 (1031)
Q Consensus 885 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~ 962 (1031)
||+||||||+||+++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999987642 2224567799999999987 67999999999999999999999
Q ss_pred CCCCCcCccchhhhhhHH-HhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 963 HPRDYVSTNFSSFSNMIT-EINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 963 ~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.||............... ..........+... .....+.+++.+||+.||++|||+.|+++
T Consensus 291 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 291 LPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCT----PLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSS----CCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCcCcccccchhhhhhhhccccccchhhcc----CCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 998765432111111000 00000011111100 11236778999999999999999999864
No 250
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.1e-36 Score=353.18 Aligned_cols=198 Identities=22% Similarity=0.257 Sum_probs=171.2
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC------CCCceeeeeeeEecC
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI------RHRNIIKFHGFCSNA 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l------~h~niv~l~~~~~~~ 831 (1031)
.+|++.+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|+.+++.+ +|+||+++++++...
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 5699999999999999999954 568999999997542 2345666777777666 578999999999999
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc--eEEecc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE--AHVSDF 909 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Df 909 (1031)
+..++||||+. ++|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 99999999996 68999887654 23589999999999999999999999 9999999999999999987 999999
Q ss_pred ccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 247 G~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 247 GSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 999865432 234678999999999999999999999999999999999999987554
No 251
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.7e-36 Score=332.84 Aligned_cols=255 Identities=24% Similarity=0.321 Sum_probs=204.8
Q ss_pred HHHHhccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 755 IKAIDDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 755 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
....++|++.+.||+|+||.||+|... +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS 95 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB--SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc--chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence 344578999999999999999999664 799999999876432 23457789999999999999999999999999999
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceEEeccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSDFG 910 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg 910 (1031)
.++|+||+++++|.+++.... .+++.+++.++.|++.||+|||+. ||+||||||+||+++.+ +.+||+|||
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEEEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccC
Confidence 999999999999999886543 588999999999999999999999 99999999999999764 469999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
++....... ......+++.|+|||++.+ .++.++||||+|+++|+|++|+.||...... ... ..+... ..
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~---~~~~~~---~~ 239 (287)
T 2wei_A 170 LSTCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DIL---KRVETG---KY 239 (287)
T ss_dssp GGGTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HHHHHC---CC
T ss_pred cceeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHH---HHHHcC---CC
Confidence 998765432 2344568999999999876 5899999999999999999999998654321 111 111111 11
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1111111112236788999999999999999999986
No 252
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.1e-37 Score=347.45 Aligned_cols=270 Identities=18% Similarity=0.234 Sum_probs=199.1
Q ss_pred cHHHHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhh-------hhhcHHHHHHHHHHHhcCCCCcee
Q 043316 750 LYEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFD-------EMADQDEFLNEVLALTEIRHRNII 822 (1031)
Q Consensus 750 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~~Ei~~l~~l~h~niv 822 (1031)
...++....++|.+.+.||+|+||.||+|...+++.||||++....... +....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4556677789999999999999999999988889999999986543211 122347899999999999999999
Q ss_pred eeeeeEec-----CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCee
Q 043316 823 KFHGFCSN-----AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVL 897 (1031)
Q Consensus 823 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 897 (1031)
++++++.. ....++||||++ |+|.+++.... ..+++..+..++.||+.||+|||+. ||+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999843 346899999998 58888876542 3589999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhh
Q 043316 898 LDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFS 976 (1031)
Q Consensus 898 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~ 976 (1031)
++.++.+||+|||++...... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~ 244 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLN 244 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH
T ss_pred EcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHH
Confidence 999999999999999865432 23345678999999999877 678999999999999999999999987543211 111
Q ss_pred hhHHHh----------------hh---hcCCCCCCCChh--HHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 977 NMITEI----------------NQ---NLDHRLPTPSRD--VMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 977 ~~~~~~----------------~~---~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...... .. ......+..... .......+.+++.+||+.||++|||+.|+++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 110000 00 000011110000 0011235789999999999999999999985
No 253
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.7e-36 Score=344.67 Aligned_cols=257 Identities=21% Similarity=0.295 Sum_probs=198.7
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----Q 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~ 832 (1031)
.+|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++... .
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 5799999999999999999954 578999999987532 233457889999999999999999999999654 4
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++||||++ ++|.++++.. .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 6899999997 5899988653 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH-------
Q 043316 913 KFLNPHSS---NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE------- 981 (1031)
Q Consensus 913 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~------- 981 (1031)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQE 254 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHH
Confidence 87643322 1345678999999998654 458999999999999999999999987554321 11111000
Q ss_pred ------------hhhhcCCCCCCCC-hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 ------------INQNLDHRLPTPS-RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ------------~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
............. .........+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000000 000011236789999999999999999999985
No 254
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.6e-36 Score=334.16 Aligned_cols=251 Identities=24% Similarity=0.406 Sum_probs=191.7
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----- 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----- 830 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence 356899999999999999999965 57999999998643 2346788999999999999999999998854
Q ss_pred --------CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC
Q 043316 831 --------AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH 902 (1031)
Q Consensus 831 --------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1031)
.+..++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTS
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCC
Confidence 457899999999999999997643 3567889999999999999999999 999999999999999999
Q ss_pred ceEEeccccccccCCCC--------------CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCC
Q 043316 903 EAHVSDFGIAKFLNPHS--------------SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDY 967 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~ 967 (1031)
.+||+|||++....... .......|++.|+|||++.+. .++.++||||+||++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 99999999998764321 122345689999999998764 68999999999999999998 4432
Q ss_pred cCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 968 VSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... ......+... ....+.... ......+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~----~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 231 GMER----VNILKKLRSV-SIEFPPDFD--DNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHH----HHHHHHHHST-TCCCCTTCC--TTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhH----HHHHHhcccc-ccccCcccc--ccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 2111 1111111111 111111111 112235678999999999999999999986
No 255
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=9.7e-37 Score=340.52 Aligned_cols=284 Identities=20% Similarity=0.249 Sum_probs=162.9
Q ss_pred cCCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCC
Q 043316 22 SSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFP 101 (1031)
Q Consensus 22 ~~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~ 101 (1031)
+++..+|++||++||+++.. ++ .+++++|... +..+.++|.|.|++|+.... .+. -...+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~-~~-~~~~~~w~~~--~~~~~~~~~~~g~~~~~~~~-------------~l~---~~~~~ 81 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNA-DR-NRWHSAWRQA--NSNNPQIETRTGRALKATAD-------------LLE---DATQP 81 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHH-CC-TTHHHHHHHH--TTTCTTSCCSHHHHHHHHHH-------------HHH---HHTST
T ss_pred cccCchHHHHHHHHHHhccC-Cc-hhhhhhhccc--ccccccccccCCcchhhhHH-------------HHh---ccccc
Confidence 34667899999999999852 33 5678899310 11456899999999953100 000 01123
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
++++|+|++|.++ .+|+.++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 4444455555544 44545555555555555555554 44555555555555555555554 445555555555555555
Q ss_pred CcccCCCCCCcccc---------cccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEe
Q 043316 182 HNNFSGRIPPSLGN---------LSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYL 252 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~---------l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 252 (1031)
+|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|+|
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDL 236 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEEC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEEC
Confidence 55555555544433 566666666666655 55555666666666666666665 34445556666666666
Q ss_pred ecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccC
Q 043316 253 YKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD 330 (1031)
Q Consensus 253 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 330 (1031)
++|.+.+.+|..++++++|++|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..++++++|+.+++..+.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 666666666666666666666666666665566666666666666666666666666666666666666655554443
No 256
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8e-37 Score=352.61 Aligned_cols=201 Identities=21% Similarity=0.342 Sum_probs=155.9
Q ss_pred hccCc-cceeecCCCccEEEEEeC---CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe--cCC
Q 043316 759 DDFGE-KYCIGKGRQGSVYKAELP---SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS--NAQ 832 (1031)
Q Consensus 759 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~--~~~ 832 (1031)
+.|++ +++||+|+||+||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++++++. ...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 45665 568999999999999754 57899999997543 2346789999999999999999999994 477
Q ss_pred eeEEEEEeccCCCchhhcccCC------ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee----CCCC
Q 043316 833 HSFIVSEYLDRGSLTTILKDDA------AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL----DSEH 902 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~ 902 (1031)
..++||||++ ++|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 8999999997 47877775322 122488999999999999999999999 99999999999999 6778
Q ss_pred ceEEeccccccccCCCC---CCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 903 EAHVSDFGIAKFLNPHS---SNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
.+||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999998765322 223456789999999998874 58999999999999999999999986443
No 257
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.2e-36 Score=349.14 Aligned_cols=256 Identities=21% Similarity=0.237 Sum_probs=192.6
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQ------ 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~------ 832 (1031)
.+|++.+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~--------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR--------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc--------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 56999999999999999999887777799998855321 1237999999999999999999995443
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-CCCceEEecccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-SEHEAHVSDFGI 911 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~ 911 (1031)
..++||||++++.+............+++..+..++.||++||+|||+. ||+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 3789999998754443332222234688999999999999999999999 999999999999999 799999999999
Q ss_pred ccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT---------- 980 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~---------- 980 (1031)
++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||....... .......
T Consensus 189 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 189 AKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQI 266 (394)
T ss_dssp CEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHH
T ss_pred cccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 98764332 23456789999999998765 58999999999999999999999987554321 1111111
Q ss_pred -Hhhh-hcCCCCCCCCh-hHHH-----HHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 -EINQ-NLDHRLPTPSR-DVMD-----KLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 -~~~~-~~~~~~~~~~~-~~~~-----~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... .....++.... .... ...++.+++.+||+.||++|||+.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000 01111111000 0000 1236789999999999999999999975
No 258
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=341.92 Aligned_cols=254 Identities=23% Similarity=0.389 Sum_probs=198.6
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
.++|++.+.||+|+||.||+|.... .||+|+++.... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERD--NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSC--CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCC--CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 4678999999999999999997743 499999876432 222345677899999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.+++.... ..+++.+++.++.|++.||+|||++ ||+||||||+||+++ ++.+||+|||++.....
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999999997653 3588899999999999999999999 999999999999998 78999999999876532
Q ss_pred C-----CCCceeeccccCccccccccc---------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh
Q 043316 918 H-----SSNWTAFAGTFGYAAPEIAHM---------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN 983 (1031)
Q Consensus 918 ~-----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 983 (1031)
. ........|++.|+|||++.+ ..++.++||||+||++|||++|+.||...... .......
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~ 256 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-----AIIWQMG 256 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-----HHHHHHH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHhc
Confidence 1 122334568999999999874 34788999999999999999999998654331 1111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 984 QNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
....+..... .....+.+++.+||+.||++|||+.|+++.|++
T Consensus 257 ~~~~~~~~~~-----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 299 (319)
T 2y4i_B 257 TGMKPNLSQI-----GMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299 (319)
T ss_dssp TTCCCCCCCS-----SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTT
T ss_pred cCCCCCCCcC-----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 2222221111 011257788999999999999999999999874
No 259
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.3e-36 Score=345.65 Aligned_cols=265 Identities=20% Similarity=0.221 Sum_probs=187.6
Q ss_pred HHHHHHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec
Q 043316 752 EEIIKAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN 830 (1031)
Q Consensus 752 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 830 (1031)
+......++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+|++.++.++||||+++++++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-----TCCCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-----cccHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 44567789999999999999999999965 579999999985532 223456678888888999999999999865
Q ss_pred CCe-------eEEEEEeccCCCchhhccc-CCccccCCHHHHHHHHHHHHHHHHHhh--hCCCCCeeeCCCCCCCeeeCC
Q 043316 831 AQH-------SFIVSEYLDRGSLTTILKD-DAAAKEFGWNQRMNVIKGVANALSYLH--HDCLPPIVHGDISSKNVLLDS 900 (1031)
Q Consensus 831 ~~~-------~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlkp~NIll~~ 900 (1031)
.+. .++||||+++ ++.+.+.. ......+++..+..++.|++.|++||| +. ||+||||||+||+++.
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNE 166 (360)
T ss_dssp ECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEET
T ss_pred cccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeC
Confidence 433 7899999986 44443332 122345788999999999999999999 77 9999999999999997
Q ss_pred -CCceEEeccccccccCCCCCCceeeccccCccccccccccC-CCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhh
Q 043316 901 -EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMR-ATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978 (1031)
Q Consensus 901 -~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~ 978 (1031)
++.+||+|||+++...... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||....... .....
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~ 244 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEI 244 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred CCCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHH
Confidence 8999999999998765432 234567899999999987654 8999999999999999999999987544321 11111
Q ss_pred HHHh-------hhhcCCCCCC------CChhH--------HHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 979 ITEI-------NQNLDHRLPT------PSRDV--------MDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 979 ~~~~-------~~~~~~~~~~------~~~~~--------~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... .....+.... ..... ......+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1100 0000000000 00000 012346889999999999999999999975
No 260
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.2e-37 Score=344.21 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=198.3
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHH-HhcCCCCceeeeeeeEecCCeeE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLA-LTEIRHRNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~niv~l~~~~~~~~~~~ 835 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....++..|+.+ ++.++||||+++++++.+++..+
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN---SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC---CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC---cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 46789999999999999999965 6799999999976432 1234555666665 78889999999999999999999
Q ss_pred EEEEeccCCCchhhcccCC-ccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 836 IVSEYLDRGSLTTILKDDA-AAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+||||+++ +|.+++.... ....+++..++.++.||+.||+|||+++ ||+||||||+||+++.++.+||+|||++..
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999975 9988886421 2346899999999999999999999742 899999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCcccccccc----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIAH----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
.... .......||+.|+|||++. +..++.++|||||||++|||+||+.||+........... .........
T Consensus 204 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~----~~~~~~~~~ 278 (340)
T 3an0_A 204 LVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ----VVEEPSPQL 278 (340)
T ss_dssp HSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH----HHHSCCCCC
T ss_pred cccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHH----HhcCCCCCC
Confidence 6432 1223357899999999964 346889999999999999999999998754432222211 111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+ .. ....++.+++.+||+.||++|||+.|+++
T Consensus 279 ~---~~--~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 279 P---AD--KFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp C---GG--GSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C---cc--cCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1 11 11236788999999999999999999975
No 261
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-36 Score=355.41 Aligned_cols=254 Identities=17% Similarity=0.252 Sum_probs=201.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC-CceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~~~~~~~~~~~l 836 (1031)
++|.+.++||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++.++| +++..+..++.+.+..++
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~------~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT------KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC------SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc------ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 6799999999999999999964 679999999876543 22347789999999986 566677777788889999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee---CCCCceEEecccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL---DSEHEAHVSDFGIAK 913 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 913 (1031)
||||+ +++|.+++.... ..+++.+++.++.||+.||+|||++ +||||||||+||++ +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 899999997542 3589999999999999999999999 99999999999999 588999999999998
Q ss_pred ccCCCCCC-------ceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccch--hhhhhHHHhhh
Q 043316 914 FLNPHSSN-------WTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFS--SFSNMITEINQ 984 (1031)
Q Consensus 914 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~--~~~~~~~~~~~ 984 (1031)
.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-- 232 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-- 232 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH--
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc--
Confidence 76543321 2256799999999999999999999999999999999999999876543211 111111110
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 985 NLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
...... ........++.+++..||+.||++||++++|++.|+
T Consensus 233 -~~~~~~---~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 233 -VATSIE---ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp -HHSCHH---HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred -ccccHH---HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 000000 000011236788999999999999999999999886
No 262
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.2e-36 Score=336.48 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=196.9
Q ss_pred HHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC--CCceeeeeeeEecCCee
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR--HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~~~ 834 (1031)
..++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++.+++..
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 3467999999999999999999888899999999865432 2335678899999999997 59999999999999999
Q ss_pred EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 835 FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
++||| +.+++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||++..
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeecccccc
Confidence 99999 56789999998653 578899999999999999999999 999999999999996 58999999999987
Q ss_pred cCCCCC--CceeeccccCccccccccc-----------cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH
Q 043316 915 LNPHSS--NWTAFAGTFGYAAPEIAHM-----------MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 915 ~~~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~ 981 (1031)
...... ......|++.|+|||++.+ ..++.++||||+||++|||++|+.||........... ..
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~---~~ 252 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH---AI 252 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH---HH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH---HH
Confidence 654322 1234578999999999865 4678899999999999999999999875443221111 11
Q ss_pred hhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 INQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.........+... ...+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 253 IDPNHEIEFPDIP------EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HCTTSCCCCCCCS------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhcccccCCcccc------hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1111111222211 135778899999999999999999985
No 263
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-36 Score=345.59 Aligned_cols=257 Identities=23% Similarity=0.255 Sum_probs=193.1
Q ss_pred HHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec-----
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----- 830 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----- 830 (1031)
..++|++.+.||+|+||.||+|.. .+++.||||++..... ...+|+++++.++||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 456899999999999999999954 6899999999865421 12379999999999999999999843
Q ss_pred ---------------------------------CCeeEEEEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHH
Q 043316 831 ---------------------------------AQHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALS 876 (1031)
Q Consensus 831 ---------------------------------~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~ 876 (1031)
....++||||++ ++|.+.+... .....+++..+..++.||++||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 334889999998 5777777542 12345889999999999999999
Q ss_pred HhhhCCCCCeeeCCCCCCCeeeC-CCCceEEeccccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHH
Q 043316 877 YLHHDCLPPIVHGDISSKNVLLD-SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVL 954 (1031)
Q Consensus 877 ~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~i 954 (1031)
|||+. ||+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||++.+. .++.++||||+||+
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 99999 999999999999998 68899999999998765432 33456789999999998775 48999999999999
Q ss_pred HHHHHhCCCCCCCcCccchhhhhhHHHh-----------hhh-cCCCCCCCC-hhHHH-----HHHHHHHHHHhhccCCC
Q 043316 955 ALEVIKGNHPRDYVSTNFSSFSNMITEI-----------NQN-LDHRLPTPS-RDVMD-----KLMSIMEVAILCLVESP 1016 (1031)
Q Consensus 955 l~elltG~~P~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~-~~~~~-----~~~~l~~li~~cl~~dP 1016 (1031)
+|||++|+.||....... .....+... ... ....++... ..... ....+.+++.+||+.||
T Consensus 232 l~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 232 FGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 999999999987544321 111111100 000 000011000 00000 12357899999999999
Q ss_pred CCCCCHHHHHH
Q 043316 1017 EARPTMKKVCN 1027 (1031)
Q Consensus 1017 ~~Rps~~evl~ 1027 (1031)
++|||+.|+++
T Consensus 311 ~~R~t~~e~l~ 321 (383)
T 3eb0_A 311 DLRINPYEAMA 321 (383)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999999974
No 264
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.1e-36 Score=343.20 Aligned_cols=254 Identities=20% Similarity=0.275 Sum_probs=195.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCee---
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHS--- 834 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~--- 834 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc--chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 5789999999999999999954 5799999999976432 223467889999999999999999999999877655
Q ss_pred ---EEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 835 ---FIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 835 ---~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
++||||++ ++|.+++.. .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 588887743 388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHH----------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMIT---------- 980 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~---------- 980 (1031)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .......
T Consensus 191 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 191 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFV 266 (371)
T ss_dssp C-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHH
T ss_pred ccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHH
Confidence 9865432 345678999999999887 678999999999999999999999987543211 1111100
Q ss_pred ---------HhhhhcCCCCCCCC-hhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 981 ---------EINQNLDHRLPTPS-RDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 981 ---------~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.............. .........+.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00000111100000 000011346789999999999999999999975
No 265
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2e-36 Score=348.98 Aligned_cols=257 Identities=21% Similarity=0.231 Sum_probs=197.3
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC--------CCceeeeeeeEe
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR--------HRNIIKFHGFCS 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--------h~niv~l~~~~~ 829 (1031)
++|++.++||+|+||+||+|+. .+++.||||+++... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-----HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-----cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 6799999999999999999954 578999999987532 34567889999999885 788999999997
Q ss_pred ----cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCC---
Q 043316 830 ----NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEH--- 902 (1031)
Q Consensus 830 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 902 (1031)
.....++||||+. +++.+++.... ...+++..++.++.||+.||+|||+++ ||+||||||+||+++.++
T Consensus 112 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 112 ISGVNGTHICMVFEVLG-HHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEETTEEEEEEEECCCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ecCCCCceEEEEEeccC-ccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 5668899999994 56656554432 245899999999999999999999864 899999999999999775
Q ss_pred ----------------------------------------------ceEEeccccccccCCCCCCceeeccccCcccccc
Q 043316 903 ----------------------------------------------EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEI 936 (1031)
Q Consensus 903 ----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~ 936 (1031)
.+||+|||++...... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999876432 345678999999999
Q ss_pred ccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchh-hhhhHHHhhhhcCC--------------------------C
Q 043316 937 AHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSS-FSNMITEINQNLDH--------------------------R 989 (1031)
Q Consensus 937 ~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~~~~~~--------------------------~ 989 (1031)
+.+..++.++||||+||++|||+||+.||......... .......+...... .
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 99989999999999999999999999998754432110 00000000000000 0
Q ss_pred CCCC---------ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 990 LPTP---------SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 990 ~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
.... ..........+.+++.+||+.||++|||++|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0000 0001233457889999999999999999999985
No 266
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=335.22 Aligned_cols=256 Identities=18% Similarity=0.257 Sum_probs=190.3
Q ss_pred hccCccceeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe--------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS-------- 829 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~-------- 829 (1031)
++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC----hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 57899999999999999999664 58999999986532 345678899999999999999999999873
Q ss_pred ------cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-CCC
Q 043316 830 ------NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-SEH 902 (1031)
Q Consensus 830 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 902 (1031)
+....++||||++ |+|.+++... .+++..++.++.|++.||+|||++ ||+||||||+||+++ .++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 4467899999998 6999998653 478899999999999999999999 999999999999997 567
Q ss_pred ceEEeccccccccCCCC---CCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhh
Q 043316 903 EAHVSDFGIAKFLNPHS---SNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNM 978 (1031)
Q Consensus 903 ~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~ 978 (1031)
.+||+|||+++...... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... .....
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~ 237 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLI 237 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 99999999998764321 12234567899999998765 678999999999999999999999987554311 11100
Q ss_pred HHH-----------h--------hhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 979 ITE-----------I--------NQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 979 ~~~-----------~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... . .....................+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000 0 000000000000000011346789999999999999999999975
No 267
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.1e-36 Score=346.76 Aligned_cols=255 Identities=23% Similarity=0.285 Sum_probs=191.0
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA------ 831 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 831 (1031)
.+|+..+.||+|+||.||+|+. .+++.||||++.... ..+.+|++++++++||||+++++++...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 4688999999999999999966 469999999986532 1123799999999999999999998432
Q ss_pred CeeEEEEEeccCCCchhhcccC-CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-CceEEecc
Q 043316 832 QHSFIVSEYLDRGSLTTILKDD-AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-HEAHVSDF 909 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Df 909 (1031)
...++||||+++ ++.+.+... .....+++..+..++.||++||+|||++ ||+||||||+||+++.+ +.+||+||
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccc
Confidence 236799999986 565555432 1234689999999999999999999999 99999999999999965 56899999
Q ss_pred ccccccCCCCCCceeeccccCcccccccccc-CCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhh-----
Q 043316 910 GIAKFLNPHSSNWTAFAGTFGYAAPEIAHMM-RATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEIN----- 983 (1031)
Q Consensus 910 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~----- 983 (1031)
|+++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+...+....
T Consensus 202 G~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 202 GSAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 279 (420)
T ss_dssp TTCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHH
T ss_pred hhhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHH
Confidence 9998764332 23456789999999998764 6899999999999999999999998754431 11111111000
Q ss_pred --hhcCC-----CCCCCCh-hHH-----HHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 984 --QNLDH-----RLPTPSR-DVM-----DKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 984 --~~~~~-----~~~~~~~-~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+ .++.... .+. ....++.+++.+||+.||++|||+.|+++
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00000 1111000 000 11246789999999999999999999975
No 268
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=5.1e-36 Score=348.29 Aligned_cols=249 Identities=24% Similarity=0.309 Sum_probs=186.4
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+++..++||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 35556889999999998876678999999998653 244678999999876 8999999999999999999999
Q ss_pred EeccCCCchhhcccCCcccc----CCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-------------
Q 043316 839 EYLDRGSLTTILKDDAAAKE----FGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE------------- 901 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~----l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------------- 901 (1031)
||++ |+|.+++........ .++..++.++.||+.||+|||++ ||+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 699999976532211 13445678999999999999999 99999999999999754
Q ss_pred CceEEeccccccccCCCCCC----ceeeccccCccccccccc-------cCCCccccchhhhHHHHHHHh-CCCCCCCcC
Q 043316 902 HEAHVSDFGIAKFLNPHSSN----WTAFAGTFGYAAPEIAHM-------MRATEKYDVHSFGVLALEVIK-GNHPRDYVS 969 (1031)
Q Consensus 902 ~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~ellt-G~~P~~~~~ 969 (1031)
+.+||+|||+++........ .....||+.|+|||++.+ ..++.++||||+||++|||+| |+.||+...
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 47999999999987543221 234579999999999875 568999999999999999999 999986443
Q ss_pred ccchhhhhhHHHhhhhcCC-CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 970 TNFSSFSNMITEINQNLDH-RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
... .... ...... .... ........++.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~---~~i~---~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 SRE---SNII---RGIFSLDEMKC--LHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp THH---HHHH---HTCCCCCCCTT--CCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhH---HHHh---cCCCCcccccc--cccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 211 1111 111111 1111 111233457889999999999999999999975
No 269
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.9e-36 Score=363.19 Aligned_cols=253 Identities=23% Similarity=0.381 Sum_probs=201.2
Q ss_pred HhccCccceeecCCCccEEEEEeC----CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELP----SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 833 (1031)
.++|++.+.||+|+||.||+|... .+..||||+++... .....+.+.+|+.++++++||||+++++++.+ +.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~ 464 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP 464 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc
Confidence 467999999999999999999653 25679999986532 22345789999999999999999999999854 56
Q ss_pred eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccccc
Q 043316 834 SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAK 913 (1031)
Q Consensus 834 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 913 (1031)
.++||||+++|+|.++++... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 899999999999999997543 3578999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CceeeccccCccccccccccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 914 FLNPHSS-NWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 914 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
....... ......+|+.|+|||++.+..++.++||||+||++|||++ |..||...... .....+........+
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~ 614 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMP 614 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHHTCCCCCC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHcCCCCCCC
Confidence 7644322 1233456789999999998899999999999999999997 99998754331 111222221111222
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCNLLC 1030 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 1030 (1031)
.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 615 ~~------~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 615 PN------CPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp TT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cc------ccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11 1236778999999999999999999999886
No 270
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.7e-36 Score=340.78 Aligned_cols=256 Identities=22% Similarity=0.291 Sum_probs=196.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecC-----C
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNA-----Q 832 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-----~ 832 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++.... .......+.+|+.++++++||||+++++++... .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc---cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 6799999999999999999965 479999999986432 233466788999999999999999999988654 6
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccc
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIA 912 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 912 (1031)
..++||||++ ++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 7899999997 5899888753 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----------CceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH
Q 043316 913 KFLNPHSS----------NWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE 981 (1031)
Q Consensus 913 ~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~ 981 (1031)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~ 238 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGI 238 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHH
Confidence 87643221 1223568999999998764 678999999999999999999999987554211 00000000
Q ss_pred --------------------hhhhcCCCCCCCCh--hHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 --------------------INQNLDHRLPTPSR--DVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 --------------------~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...... ..+.... ........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLP-MYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSC-CCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCchhccccccccchhhHHhhccc-CCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0000000 00011235778999999999999999999986
No 271
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.6e-36 Score=337.98 Aligned_cols=262 Identities=22% Similarity=0.291 Sum_probs=199.2
Q ss_pred HHhccCccceeecCCCccEEEEEe--CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC---CCCceeeeeeeEe--
Q 043316 757 AIDDFGEKYCIGKGRQGSVYKAEL--PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI---RHRNIIKFHGFCS-- 829 (1031)
Q Consensus 757 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~-- 829 (1031)
+.++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 347899999999999999999976 468899999987543211 1233456777776655 8999999999987
Q ss_pred ---cCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEE
Q 043316 830 ---NAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHV 906 (1031)
Q Consensus 830 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 906 (1031)
.....++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 5677899999998 699999876532 3488999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL 986 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 986 (1031)
+|||++...... .......+++.|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 162 ~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~ 239 (326)
T 1blx_A 162 ADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPG 239 (326)
T ss_dssp CSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCC
T ss_pred ecCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCC
Confidence 999999876432 2234567899999999999989999999999999999999999998754431 11111111110000
Q ss_pred CCCC---------------CCC-ChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 987 DHRL---------------PTP-SRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 987 ~~~~---------------~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...+ ... ..........+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 000 0000111235778999999999999999999985
No 272
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=8.5e-36 Score=337.63 Aligned_cols=254 Identities=20% Similarity=0.269 Sum_probs=194.5
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe----
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH---- 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~---- 833 (1031)
++|.+.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 5688999999999999999965 5799999999976432 22346778999999999999999999999987654
Q ss_pred --eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 834 --SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 834 --~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
.++||||++ ++|.+++.. .+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 588888753 378899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCceeeccccCccccccccc-cCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHH---------
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHM-MRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITE--------- 981 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~--------- 981 (1031)
+...... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFV 248 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHH
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 9865432 345678999999999877 678999999999999999999999987543211 11110000
Q ss_pred ----------hhhhcCCCC-CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 982 ----------INQNLDHRL-PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 982 ----------~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
......... .............+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000 0000001112346788999999999999999999975
No 273
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=9.5e-36 Score=335.32 Aligned_cols=254 Identities=19% Similarity=0.242 Sum_probs=199.3
Q ss_pred hccCccceeecCCCccEEEEEe--CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCC------ceeeeeeeEec
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL--PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR------NIIKFHGFCSN 830 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~------niv~l~~~~~~ 830 (1031)
++|++.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.+++.++|+ +++++++++.+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-----RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-----HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-----chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 5799999999999999999965 468999999986532 2356778899888888654 59999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC----------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---------- 900 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---------- 900 (1031)
.+..++||||+ +++|.+++.... ...+++.++..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 99999999999 889999997653 23578999999999999999999999 9999999999999987
Q ss_pred ---------CCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 901 ---------EHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 901 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999875432 24467899999999999989999999999999999999999998754432
Q ss_pred chhhhhhHHHhhhhcCC-----------------CCCCC-----------------ChhHHHHHHHHHHHHHhhccCCCC
Q 043316 972 FSSFSNMITEINQNLDH-----------------RLPTP-----------------SRDVMDKLMSIMEVAILCLVESPE 1017 (1031)
Q Consensus 972 ~~~~~~~~~~~~~~~~~-----------------~~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~ 1017 (1031)
. ....+.......+. .+... ..........+.+++.+||+.||+
T Consensus 241 ~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 241 E--HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp H--HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred H--HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 1 11111111000000 00000 000012234688999999999999
Q ss_pred CCCCHHHHHH
Q 043316 1018 ARPTMKKVCN 1027 (1031)
Q Consensus 1018 ~Rps~~evl~ 1027 (1031)
+|||++|+++
T Consensus 319 ~Rpt~~ell~ 328 (339)
T 1z57_A 319 KRITLREALK 328 (339)
T ss_dssp TSCCHHHHTT
T ss_pred cccCHHHHhc
Confidence 9999999975
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4e-36 Score=336.63 Aligned_cols=256 Identities=25% Similarity=0.323 Sum_probs=176.8
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHH-HHhcCCCCceeeeeeeEecCCeeEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVL-ALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
++|.+.+.||+|+||.||+|.. .+++.||||++..... ......+.+|+. +++.++||||+++++++.+++..++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 5788999999999999999965 5799999999976431 223445666666 6778899999999999999999999
Q ss_pred EEEeccCCCchhhcccC--CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 837 VSEYLDRGSLTTILKDD--AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
||||+++ +|.+++... .....+++..+..++.|++.||+|||+.. ||+||||||+||+++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999985 787777531 11245889999999999999999999852 899999999999999999999999999987
Q ss_pred cCCCCCCceeeccccCccccccc----cccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 915 LNPHSSNWTAFAGTFGYAAPEIA----HMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 915 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
..... ......|++.|+|||++ .+..++.++||||+||++|||++|+.||............ ......+.+
T Consensus 176 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~~~~~~ 250 (327)
T 3aln_A 176 LVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ----VVKGDPPQL 250 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CC----CCCSCCCCC
T ss_pred ccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHH----HhcCCCCCC
Confidence 64332 23345789999999998 4567899999999999999999999998754332111111 111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 251 SNSEE--REFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCSS--CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCccc--ccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11000 011236788999999999999999999875
No 275
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.2e-36 Score=335.99 Aligned_cols=244 Identities=22% Similarity=0.339 Sum_probs=198.3
Q ss_pred HhccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhh--hhhcHHHHHHHHHHHhcCC--CCceeeeeeeEecCC
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFD--EMADQDEFLNEVLALTEIR--HRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~ 832 (1031)
.++|++.+.||+|+||.||+|. ..+++.||||++....... +....+.+.+|+.++++++ ||||+++++++.+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 4679999999999999999995 4678999999997654321 1112345678999999996 599999999999999
Q ss_pred eeEEEEEeccC-CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-CCCceEEeccc
Q 043316 833 HSFIVSEYLDR-GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-SEHEAHVSDFG 910 (1031)
Q Consensus 833 ~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg 910 (1031)
..++|+|++.+ ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999986 8999999764 3588899999999999999999999 999999999999999 78899999999
Q ss_pred cccccCCCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCC
Q 043316 911 IAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHR 989 (1031)
Q Consensus 911 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1031)
++...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||+.... ...........
T Consensus 196 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~~~~~~~~~~ 265 (320)
T 3a99_A 196 SGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------IIRGQVFFRQR 265 (320)
T ss_dssp TCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HHHCCCCCSSC
T ss_pred cccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------hhccccccccc
Confidence 99876532 2345678999999999887665 7889999999999999999999864321 00000011111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 990 LPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 990 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
...++.+++.+||+.||++|||++|+++
T Consensus 266 ----------~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 266 ----------VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ----------CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----------CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1135778999999999999999999986
No 276
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=6e-36 Score=335.99 Aligned_cols=252 Identities=20% Similarity=0.263 Sum_probs=170.5
Q ss_pred HhccCccc-eeecCCCccEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec----C
Q 043316 758 IDDFGEKY-CIGKGRQGSVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN----A 831 (1031)
Q Consensus 758 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~ 831 (1031)
.++|.+.+ .||+|+||+||+|... +++.||||++.... ... .+....++.++||||+++++++.. +
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KAR---QEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHH---HHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 36788854 6999999999999654 79999999986532 111 122233566789999999999876 4
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC---CceEEec
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE---HEAHVSD 908 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~D 908 (1031)
...++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.+ +.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 55899999999999999998653 24589999999999999999999999 99999999999999864 4599999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCC
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDH 988 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1031)
||++...... ......+|+.|+|||++.+..++.++||||+||++|+|++|+.||.......... .......... .
T Consensus 175 fg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~-~ 250 (336)
T 3fhr_A 175 FGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-GMKRRIRLGQ-Y 250 (336)
T ss_dssp CTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-hHHHhhhccc-c
Confidence 9999876432 2345678999999999988889999999999999999999999986443321100 0000110000 0
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 989 RLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 989 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
..+. .........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 251 GFPN--PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CCCT--TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccCc--hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0110 000112235778999999999999999999986
No 277
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.6e-36 Score=345.13 Aligned_cols=247 Identities=23% Similarity=0.290 Sum_probs=186.2
Q ss_pred hccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv 837 (1031)
.+|...++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+....|+|
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 46888999999999997766666899999999865431 1245899999999 799999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC-----CceEEeccccc
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE-----HEAHVSDFGIA 912 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~kl~Dfg~a 912 (1031)
|||++ |+|.+++..... ...+.++..++.||+.||+|||+. +|+||||||+||+++.+ ..+||+|||++
T Consensus 97 ~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 99996 599999976542 344456789999999999999999 99999999999999532 35889999999
Q ss_pred cccCCCC---CCceeeccccCcccccccc---ccCCCccccchhhhHHHHHHHh-CCCCCCCcCccchhhhhhHHHhhhh
Q 043316 913 KFLNPHS---SNWTAFAGTFGYAAPEIAH---MMRATEKYDVHSFGVLALEVIK-GNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 913 ~~~~~~~---~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
+...... .......||+.|+|||++. +..++.++||||+||++|||++ |..||...... ........
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------~~~~~~~~ 244 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------QANILLGA 244 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH------HHHHHTTC
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH------HHHHHhcc
Confidence 8765332 2234567999999999987 4567889999999999999999 89997533221 11111111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
........ .......+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 CSLDCLHP---EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCTTSCT---TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCccccCc---cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 11111111 1122335778999999999999999999984
No 278
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-35 Score=340.32 Aligned_cols=201 Identities=23% Similarity=0.259 Sum_probs=170.3
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CC-----ceeeeeeeEec
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HR-----NIIKFHGFCSN 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~-----niv~l~~~~~~ 830 (1031)
.++|++.+.||+|+||+||+|.. .+++.||||+++... .....+.+|+.+++.++ |+ +|+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-----HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 46899999999999999999965 478999999997532 23456778888887774 44 49999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC--CCCceEEec
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD--SEHEAHVSD 908 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~D 908 (1031)
.+..++||||++ ++|.+++.... ...+++..+..++.|++.||+|||++ ..||+||||||+||+++ .++.+||+|
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 999999999996 59999997653 23588999999999999999999952 12999999999999995 477899999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcC
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVS 969 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~ 969 (1031)
||+++..... .....||+.|+|||++.+..++.++||||+||++|||+||+.||....
T Consensus 205 FG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 205 FGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999876432 345678999999999999999999999999999999999999987544
No 279
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=329.67 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=180.7
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEE
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 836 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+.++..+++.++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH--HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc--hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 46799999999999999999966 47999999999764321 1223444555567888899999999999999999999
Q ss_pred EEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 837 VSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHH-DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 837 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
||||+ ++.+..+.... ...+++..+..++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 99999 45555554432 2358899999999999999999998 6 8999999999999999999999999999866
Q ss_pred CCCCCCceeeccccCcccccccc-----ccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCC
Q 043316 916 NPHSSNWTAFAGTFGYAAPEIAH-----MMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRL 990 (1031)
Q Consensus 916 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1031)
... .......+++.|+|||++. +..++.++||||+||++|||++|+.||.......... ........+..
T Consensus 176 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~ 250 (318)
T 2dyl_A 176 VDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL----TKVLQEEPPLL 250 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH----HHHHHSCCCCC
T ss_pred cCC-ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH----HHHhccCCCCC
Confidence 432 2234557899999999984 4568899999999999999999999987543322211 12222222222
Q ss_pred CCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 991 PTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 991 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
+... .....+.+++.+||+.||.+|||++|+++
T Consensus 251 ~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 251 PGHM----GFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CSSS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CccC----CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 2111 11235778899999999999999999875
No 280
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.3e-36 Score=359.42 Aligned_cols=260 Identities=22% Similarity=0.293 Sum_probs=198.9
Q ss_pred HhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEec------
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSN------ 830 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------ 830 (1031)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 46899999999999999999965 579999999987642 23346789999999999999999999999765
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCc---eEEe
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHE---AHVS 907 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 907 (1031)
++..++||||+++|+|.+++........+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 677899999999999999998765545688899999999999999999999 9999999999999997765 9999
Q ss_pred ccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhH--------
Q 043316 908 DFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMI-------- 979 (1031)
Q Consensus 908 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~-------- 979 (1031)
|||.+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .+....
T Consensus 167 DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-~~~~~i~~~~~~~~ 244 (676)
T 3qa8_A 167 DLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-QWHGKVREKSNEHI 244 (676)
T ss_dssp SCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-HSSTTCC------C
T ss_pred cccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-hhhhhhhcccchhh
Confidence 999999775432 3355688999999999999999999999999999999999999986432110 000000
Q ss_pred -----HHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 043316 980 -----TEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKV 1025 (1031)
Q Consensus 980 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 1025 (1031)
......+....+.+..........+.+++.+||+.||++|||++|+
T Consensus 245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000001111111111111233468899999999999999999774
No 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=331.75 Aligned_cols=246 Identities=22% Similarity=0.333 Sum_probs=190.9
Q ss_pred HHHhccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhh--hhcHHHHHHHHHHHhcC----CCCceeeeeeeE
Q 043316 756 KAIDDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDE--MADQDEFLNEVLALTEI----RHRNIIKFHGFC 828 (1031)
Q Consensus 756 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l----~h~niv~l~~~~ 828 (1031)
...++|.+.+.||+|+||.||+|.. .+++.||||++........ ......+.+|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3457899999999999999999965 5789999999976542211 12234456788888888 899999999999
Q ss_pred ecCCeeEEEEEe-ccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC-CCCceEE
Q 043316 829 SNAQHSFIVSEY-LDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD-SEHEAHV 906 (1031)
Q Consensus 829 ~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl 906 (1031)
.+.+..++|+|| +.+++|.+++.... .+++..++.++.||+.||+|||+. ||+||||||+||+++ .++.+||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 999999999999 78999999997643 488999999999999999999999 999999999999999 7899999
Q ss_pred eccccccccCCCCCCceeeccccCccccccccccCC-CccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhh
Q 043316 907 SDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRA-TEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQN 985 (1031)
Q Consensus 907 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 985 (1031)
+|||++...... ......|+..|+|||++.+..+ +.++||||+||++|||++|+.||..... ... .
T Consensus 182 ~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~---~ 248 (312)
T 2iwi_A 182 IDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------ILE---A 248 (312)
T ss_dssp CCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HHH---T
T ss_pred EEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------Hhh---h
Confidence 999999876532 2345678999999999887666 4589999999999999999999763321 010 0
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 986 LDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
....+.. ....+.+++.+||+.||++|||++|+++
T Consensus 249 -~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 249 -ELHFPAH------VSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -CCCCCTT------SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -ccCCccc------CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111 1235778899999999999999999986
No 282
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.6e-35 Score=338.22 Aligned_cols=256 Identities=20% Similarity=0.252 Sum_probs=195.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-----------CCceeeeee
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-----------HRNIIKFHG 826 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----------h~niv~l~~ 826 (1031)
++|.+.+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|+.++++++ ||||+++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 5799999999999999999965 579999999987532 23566788999988876 899999999
Q ss_pred eEecCC----eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeC---
Q 043316 827 FCSNAQ----HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLD--- 899 (1031)
Q Consensus 827 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--- 899 (1031)
++...+ ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+++ ||+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 997654 789999999 889999997643 234889999999999999999999953 899999999999994
Q ss_pred ---CCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccc----
Q 043316 900 ---SEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNF---- 972 (1031)
Q Consensus 900 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~---- 972 (1031)
..+.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||+||+.||.......
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4447999999999876432 244578999999999999899999999999999999999999987543211
Q ss_pred -hhhhhhHHHhhhhcC--------------------CCCCCC---C---------hhHHHHHHHHHHHHHhhccCCCCCC
Q 043316 973 -SSFSNMITEINQNLD--------------------HRLPTP---S---------RDVMDKLMSIMEVAILCLVESPEAR 1019 (1031)
Q Consensus 973 -~~~~~~~~~~~~~~~--------------------~~~~~~---~---------~~~~~~~~~l~~li~~cl~~dP~~R 1019 (1031)
.......... ...+ ..+... . .........+.+++.+||+.||++|
T Consensus 247 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 247 DDHIAQIIELL-GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHHHH-CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred HHHHHHHHHhc-CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 0111111000 0000 000000 0 0012334578899999999999999
Q ss_pred CCHHHHHH
Q 043316 1020 PTMKKVCN 1027 (1031)
Q Consensus 1020 ps~~evl~ 1027 (1031)
||++|+++
T Consensus 326 pt~~ell~ 333 (373)
T 1q8y_A 326 ADAGGLVN 333 (373)
T ss_dssp BCHHHHHT
T ss_pred CCHHHHhh
Confidence 99999986
No 283
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.8e-35 Score=335.40 Aligned_cols=254 Identities=19% Similarity=0.238 Sum_probs=195.9
Q ss_pred hccCccceeecCCCccEEEEEeC-CC-cEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc------eeeeeeeEec
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP-SG-IIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN------IIKFHGFCSN 830 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n------iv~l~~~~~~ 830 (1031)
++|++.+.||+|+||+||+|... ++ +.||||+++... ...+.+.+|+.++++++|++ ++.+++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-----KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-----cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 67999999999999999999653 44 789999986532 23567788999998887655 9999999999
Q ss_pred CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee------------
Q 043316 831 AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL------------ 898 (1031)
Q Consensus 831 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll------------ 898 (1031)
.+..++||||+ ++++.+++.... ...+++.++..++.||+.||+|||++ ||+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 566766665543 23588999999999999999999999 99999999999999
Q ss_pred -------CCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCcc
Q 043316 899 -------DSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTN 971 (1031)
Q Consensus 899 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~ 971 (1031)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999875432 24467899999999999989999999999999999999999998754432
Q ss_pred chhhhhhHHHhhhhcCC-----------------CCCCCC-----------------hhHHHHHHHHHHHHHhhccCCCC
Q 043316 972 FSSFSNMITEINQNLDH-----------------RLPTPS-----------------RDVMDKLMSIMEVAILCLVESPE 1017 (1031)
Q Consensus 972 ~~~~~~~~~~~~~~~~~-----------------~~~~~~-----------------~~~~~~~~~l~~li~~cl~~dP~ 1017 (1031)
. ....+.......+. .++... .........+.+++.+||+.||+
T Consensus 246 ~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 246 E--HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp H--HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred H--HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 1 11111111000000 000000 00011234688999999999999
Q ss_pred CCCCHHHHHH
Q 043316 1018 ARPTMKKVCN 1027 (1031)
Q Consensus 1018 ~Rps~~evl~ 1027 (1031)
+|||++|+++
T Consensus 324 ~Rpt~~e~l~ 333 (355)
T 2eu9_A 324 QRITLAEALL 333 (355)
T ss_dssp TSCCHHHHTT
T ss_pred hCcCHHHHhc
Confidence 9999999974
No 284
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.5e-36 Score=331.83 Aligned_cols=249 Identities=30% Similarity=0.459 Sum_probs=193.3
Q ss_pred CcccEEecCCCcCcC--CCccccccCCcCcEeeCCC-CcccCCCCccccccccceEEEeeccccCCCCCccccCcccCce
Q 043316 101 PHLMYLNLSCNVLYG--NIPPQISNLSKLRALDLGN-NQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINV 177 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~--~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 177 (1031)
.+++.|+|++|.++| .+|+.++++++|++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..|+++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578899999999998 8899999999999999994 8888889999999999999999999998888888888899999
Q ss_pred eeccCcccCCCCCCcccccccccEEEecccccccccCccccccc-ccccccccccccccccCccccccCcccEEEeecCc
Q 043316 178 LTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLN-SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
|+|++|.+++.+|..++++++|++|++++|++++.+|..+++++ +|++|+|++|++++.+|..+..++ |+.|+|++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999988888888888888888888888888888888888887 888888888888888888887776 8888888887
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 336 (1031)
+++.+|..|.++++|++|+|++|++++.+|. +..+++|++|+|++|++++.+| .+
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p------------------------~~ 263 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLP------------------------QG 263 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCC------------------------GG
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCC------------------------hH
Confidence 7777777777777777777777777755554 5556666666666666655444 44
Q ss_pred ccccccCceEEcccCCCcCccCCccCcccccceEEccccc
Q 043316 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNH 376 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 376 (1031)
++.+++|++|+|++|++++.+|.. +.+++|+.|++++|+
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 555555555555555555555543 555555555555555
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.2e-35 Score=337.75 Aligned_cols=331 Identities=22% Similarity=0.238 Sum_probs=207.4
Q ss_pred CCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEE
Q 043316 292 LSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLE 371 (1031)
Q Consensus 292 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 371 (1031)
+++++.|++++|.++...+..+.++++|++|++++|.+++..+..|+.+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46667777777776633333345555555555555555554444555555555555555555555555555555555555
Q ss_pred ccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccC
Q 043316 372 LCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451 (1031)
Q Consensus 372 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 451 (1031)
+++|+++...+..|.++++|++|++++|++.+..+..|..+++|++|++++|++.++.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---------------------- 181 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---------------------- 181 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC----------------------
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc----------------------
Confidence 5555555433334455555555555555555555555555555555555555554432
Q ss_pred cccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccc
Q 043316 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS 531 (1031)
Q Consensus 452 ~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 531 (1031)
+..++.|+.+++++|.+.+ +....+|++|++++|++... |.. ..++|+.|++++|++++. ..+..
T Consensus 182 -----~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 182 -----LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp -----GGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGG
T ss_pred -----cccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcC
Confidence 2333444444444444432 22335677788888877643 322 246788888888888753 46777
Q ss_pred cCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhh
Q 043316 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELN 611 (1031)
Q Consensus 532 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 611 (1031)
+++|++|+|++|++++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 8888888888888887777888888888888888888864 4556677888888888888887 5676777888888888
Q ss_pred cCCCccCCCCccccccCCcceEEecccccccCCCCCC--CCcccccccCCCCccC
Q 043316 612 LSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS--TAFKDGLMEGNKGLCG 664 (1031)
Q Consensus 612 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~~~~~~~n~~~c~ 664 (1031)
|++|+|+... +..+++|+.|++++|++++..... ..+....+.+++..|.
T Consensus 325 L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 325 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCC
T ss_pred CCCCccceeC---chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceec
Confidence 8888887763 566788888999999888632211 1123334455555565
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.7e-34 Score=326.38 Aligned_cols=307 Identities=25% Similarity=0.352 Sum_probs=183.4
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+..+++|++|++++|.+. .+|. +..+++|++|++++|++++ +|. +.++++|++|++++|.+++ +| .++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 345677777777777776 3443 7777777777777777773 343 7777777777777777763 43 467777777
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|.++ .+|. +.++++|++|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|+.|++++|.
T Consensus 114 ~L~l~~n~i~-~~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNIS-DISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCC-CCGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCccc-Cchh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 7777777776 3444 6677777777777775543333 36666677777777776663322 5666666666666666
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPS 336 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 336 (1031)
+++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|++++..+
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-------------------------- 238 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-------------------------- 238 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--------------------------
T ss_pred cccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--------------------------
Confidence 665432 5566666666666666654333 5566666666666666553222
Q ss_pred ccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcccc
Q 043316 337 IGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLE 416 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 416 (1031)
+..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|++|++++|++.+..+..|..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 44445555555555555432 2344555555555555555433 2355555555555555555555555555555666
Q ss_pred ceeccccccccccccccCCCCCCCeecccccccc
Q 043316 417 RLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLY 450 (1031)
Q Consensus 417 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 450 (1031)
+|++++|++++..+ +..+++|+.|++++|.++
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 66666665555544 555666666666666654
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.8e-34 Score=324.48 Aligned_cols=307 Identities=28% Similarity=0.432 Sum_probs=225.0
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCccccccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~ 200 (1031)
+..+++|++|++++|.++ .+| .+..+++|++|++++|+++ .+|. ++.+++|++|+|++|.++ .+| .+.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCccc-Cch-HHcCCCcCC
Confidence 456777888888887776 444 3777777777777777776 3444 677777777777777776 343 466777777
Q ss_pred EEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccc
Q 043316 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQ 280 (1031)
Q Consensus 201 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 280 (1031)
+|++++|.+++ +|. +..+++|++|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|+
T Consensus 114 ~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 77777777663 333 6666666666666665443333 35666666666666666654332 5555555555555555
Q ss_pred ccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCc
Q 043316 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360 (1031)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 360 (1031)
+.+..+ +..+++|+.| ++++|.+.+..+ ++.+++|++|++++|++++..+
T Consensus 189 l~~~~~--~~~l~~L~~L------------------------~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYF------------------------TAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp CCCCGG--GGGCTTCCEE------------------------ECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred cccccc--ccCCCcccee------------------------ecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--
Confidence 543221 4444445554 455555544333 7788999999999999987655
Q ss_pred cCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCC
Q 043316 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440 (1031)
Q Consensus 361 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 440 (1031)
+..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|++|++++|.+.+..+..+..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 89999999999999999864 5789999999999999999986 4689999999999999999999999999999999
Q ss_pred eeccccccccCcccccccCCCccccccCcccccC
Q 043316 441 FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIY 474 (1031)
Q Consensus 441 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~ 474 (1031)
.|++++|++++..+ +..+++|++|++++|.|+
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999998876 888999999999999885
No 288
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.5e-35 Score=353.22 Aligned_cols=332 Identities=22% Similarity=0.240 Sum_probs=218.0
Q ss_pred CCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEE
Q 043316 292 LSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLE 371 (1031)
Q Consensus 292 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 371 (1031)
+++++.|++++|.++...+..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45667777777776644444445555666666666666655555566666666666666666555555555666666666
Q ss_pred ccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccC
Q 043316 372 LCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYG 451 (1031)
Q Consensus 372 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 451 (1031)
|++|.+++..+..|+++++|++|++++|.+.+..|..|.++++|++|++++|.+.++. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 6666665444444555555666666555555555555555555555555555554443 2233445555555544432
Q ss_pred cccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccc
Q 043316 452 EISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGS 531 (1031)
Q Consensus 452 ~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 531 (1031)
+....+|+.|++++|.+....+. + .++|+.|+|++|.+++ +..+..
T Consensus 207 -----------------------------l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 207 -----------------------------LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp -----------------------------EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGG
T ss_pred -----------------------------ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--Chhhcc
Confidence 23345677888888877643322 2 2578888888888875 366778
Q ss_pred cCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhh
Q 043316 532 LTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELN 611 (1031)
Q Consensus 532 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 611 (1031)
+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 8888888888888887778888888888888888888875 4666677888888888888887 6777788888888888
Q ss_pred cCCCccCCCCccccccCCcceEEecccccccCCCCCC--CCcccccccCCCCccCC
Q 043316 612 LSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIPNS--TAFKDGLMEGNKGLCGN 665 (1031)
Q Consensus 612 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~~~~~~~n~~~c~~ 665 (1031)
|++|+|++.. +..+++|+.|++++|+|+|..+.. ..+....+.++...|+.
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 8888888763 556788999999999988743211 12334456677777775
No 289
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=9.4e-35 Score=317.92 Aligned_cols=231 Identities=13% Similarity=0.095 Sum_probs=181.6
Q ss_pred hccCccceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 759 DDFGEKYCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
++|++.+.||+|+||.||+|.. .+++.||||++...... +....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVL-PDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccccc-CHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 5699999999999999999965 45899999999765422 223467899999999999999999999999999999999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++.. ....++.+++.|++.||+|||++ ||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999999643 34567889999999999999999 99999999999999999999998543
Q ss_pred CCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhH
Q 043316 918 HSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDV 997 (1031)
Q Consensus 918 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1031)
|++ .++.++||||+||++|||+||+.||........... .. ..............
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-~~----~~~~~~~~~~~~~~ 229 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-AE----RDTAGQPIEPADID 229 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-CC----BCTTSCBCCHHHHC
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-HH----HHhccCCCChhhcc
Confidence 333 368899999999999999999999875543210000 00 00000000000000
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhhC
Q 043316 998 MDKLMSIMEVAILCLVESPEARPTMKKVCNLLCK 1031 (1031)
Q Consensus 998 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 1031 (1031)
......+.+++.+||+.||++| |+.|+++.|++
T Consensus 230 ~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~ 262 (286)
T 3uqc_A 230 RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQ 262 (286)
T ss_dssp TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence 1112357889999999999999 99999999863
No 290
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.4e-33 Score=314.52 Aligned_cols=287 Identities=26% Similarity=0.304 Sum_probs=146.1
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
+++.++++++.++ .+|..+. ++|++|+|++|.+++..|..++++++|++|++++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4555555555554 4454442 355555555555554444445555555555555555554444445555555555555
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC--C
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF--G 259 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~ 259 (1031)
+|.++ .+|..+. ++|++|++++|++ ++..+..+.++++|+.|++++|.++ +
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i------------------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 163 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRI------------------------RKVPKGVFSGLRNMNCIEMGGNPLENSG 163 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCC------------------------CCCCSGGGSSCSSCCEEECCSCCCBGGG
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCcc------------------------CccCHhHhCCCccCCEEECCCCccccCC
Confidence 55444 4444333 4444444444444 4333333444444444444444443 2
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccc
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 339 (1031)
..|..+..+ +|++|++++|++++ +|..+. ++|++|++++|++++..+..+.++++|+.|++++|++++..|..++.
T Consensus 164 ~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 239 (332)
T 2ft3_A 164 FEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSF 239 (332)
T ss_dssp SCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGG
T ss_pred CCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhC
Confidence 344445554 55555555555553 343332 45556666666665555555555566666666666666555555666
Q ss_pred cccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCC------CCCceEeccCcccC--CcCchhccC
Q 043316 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNL------TKLVLVNMCENHLF--GLIPKSFRN 411 (1031)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~l~~N~l~--~~~~~~~~~ 411 (1031)
+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|... .+|+.|++++|.+. ...|..|..
T Consensus 240 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 318 (332)
T 2ft3_A 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318 (332)
T ss_dssp CTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccc
Confidence 666666666666665 445556666666666666666665555444432 33444455554443 334444444
Q ss_pred Cccccceecccc
Q 043316 412 LTSLERLRFNQN 423 (1031)
Q Consensus 412 l~~L~~L~L~~N 423 (1031)
+++|+.+++++|
T Consensus 319 l~~L~~l~l~~n 330 (332)
T 2ft3_A 319 VTDRLAIQFGNY 330 (332)
T ss_dssp BCCSTTEEC---
T ss_pred cchhhhhhcccc
Confidence 444444444433
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.5e-33 Score=316.10 Aligned_cols=287 Identities=24% Similarity=0.276 Sum_probs=221.6
Q ss_pred cceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccccccccccccc
Q 043316 150 CLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLS 229 (1031)
Q Consensus 150 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 229 (1031)
+|+.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|++++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4556666666655 5666553 567777788777776666778888888888888888887777888888888888888
Q ss_pred ccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc--ccCCcccccCCCCCeeeeccCccCC
Q 043316 230 QNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF--GSIPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 230 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
+|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|+++ +..|..|..+ +|+.|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 88888 6676665 78999999999999887778999999999999999996 4677788888 99999999999985
Q ss_pred CCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccC
Q 043316 308 SIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGN 387 (1031)
Q Consensus 308 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 387 (1031)
+|..+. ++|++|++++|.+++..|..+..+++|++|+|++|++++..+..+..+++|++|++++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 565554 68888888888888877788888888888888888888887778888888888888888887 66777888
Q ss_pred CCCCceEeccCcccCCcCchhccCC------ccccceeccccccc--cccccccCCCCCCCeeccccc
Q 043316 388 LTKLVLVNMCENHLFGLIPKSFRNL------TSLERLRFNQNNLF--GKVYEAFGDHPNLTFLDLSQN 447 (1031)
Q Consensus 388 l~~L~~L~l~~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N 447 (1031)
+++|++|++++|++++..+..|... .+|+.|++++|.+. ++.+.+|..+++|+.+++++|
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 8888888888888888777776653 44666666666654 455555666666666666554
No 292
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.3e-34 Score=350.53 Aligned_cols=236 Identities=23% Similarity=0.312 Sum_probs=190.4
Q ss_pred hccCccceeecCCCccEEEEEeC--CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCe---
Q 043316 759 DDFGEKYCIGKGRQGSVYKAELP--SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQH--- 833 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~--- 833 (1031)
++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 67999999999999999999764 68999999986532 22346678999999999999999999999987655
Q ss_pred --eEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEecccc
Q 043316 834 --SFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGI 911 (1031)
Q Consensus 834 --~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 911 (1031)
.|+||||+++++|.+++.. .+++.+++.++.||+.||+|||++ ||+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 6999999999999988754 488999999999999999999999 99999999999999875 899999999
Q ss_pred ccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCC
Q 043316 912 AKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLP 991 (1031)
Q Consensus 912 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1031)
++..... ....||+.|+|||++.++ ++.++|||||||++|+|++|..||...... ..+
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------------~~~ 285 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD-----------------GLP 285 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS-----------------SCC
T ss_pred chhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc-----------------ccc
Confidence 9876533 445789999999998765 489999999999999999998886532110 111
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHHh
Q 043316 992 TPSRDVMDKLMSIMEVAILCLVESPEARPT-MKKVCNLL 1029 (1031)
Q Consensus 992 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~L 1029 (1031)
. ..........+.+++.+||+.||++||+ ++++.+.+
T Consensus 286 ~-~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 286 E-DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQL 323 (681)
T ss_dssp T-TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred c-cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence 1 1112223346889999999999999995 55555544
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2e-34 Score=324.06 Aligned_cols=246 Identities=14% Similarity=0.122 Sum_probs=186.7
Q ss_pred HhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcCC---------CCceeee
Q 043316 758 IDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEIR---------HRNIIKF 824 (1031)
Q Consensus 758 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~---------h~niv~l 824 (1031)
.++|++.+.||+|+||+||+|+. +++.||||++...... ......+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999987 7899999999765321 12234577889999888885 6666655
Q ss_pred eee-----------------Eec-------------CCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHH
Q 043316 825 HGF-----------------CSN-------------AQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANA 874 (1031)
Q Consensus 825 ~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 874 (1031)
.++ +.+ .+..|+||||+++|++.+.+.. ..+++.++..++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 554 333 6889999999999977666643 347899999999999999
Q ss_pred HHHhh-hCCCCCeeeCCCCCCCeeeCCCC--------------------ceEEeccccccccCCCCCCceeeccccCccc
Q 043316 875 LSYLH-HDCLPPIVHGDISSKNVLLDSEH--------------------EAHVSDFGIAKFLNPHSSNWTAFAGTFGYAA 933 (1031)
Q Consensus 875 L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~a 933 (1031)
|+||| ++ +|+||||||+||+++.++ .+||+|||+|+.... ....||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-----~~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-----GIVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----TEEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----CcEEEeecccC
Confidence 99999 88 999999999999999887 899999999997643 24579999999
Q ss_pred cccccccCCCccccchhhhHH-HHHHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhc
Q 043316 934 PEIAHMMRATEKYDVHSFGVL-ALEVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCL 1012 (1031)
Q Consensus 934 PE~~~~~~~~~~sDvwslG~i-l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 1012 (1031)
||++.+.. +.++||||+|++ .+++++|..||..... ............................++.+++.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW----LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH----HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh----hhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHh
Confidence 99998765 899999998777 7788889999632110 01111122211112222222333445567899999999
Q ss_pred cCCCCCCCCHHHHH
Q 043316 1013 VESPEARPTMKKVC 1026 (1031)
Q Consensus 1013 ~~dP~~Rps~~evl 1026 (1031)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999988
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.1e-33 Score=311.68 Aligned_cols=200 Identities=24% Similarity=0.296 Sum_probs=115.5
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+.+++|+|++|++++..+..++++++|++|+|++|++++..|..++++++|++|++++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 46677777777777555556777777777777777777666666777777777777777666 5565554 56666666
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc--ccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG--SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
++|.+++..|..++++++|++|++++|.++. ..+..++++++|++|++++|+++ .+|..+. ++|++|++++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCC
Confidence 6666665445556666666666666666542 44455555555555555555555 3443332 44555555555555
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
+..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 444444555555555555555544444444444444444444444444
No 295
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.1e-33 Score=312.30 Aligned_cols=229 Identities=22% Similarity=0.283 Sum_probs=177.3
Q ss_pred hccCcc-ceeecCCCccEEEEEe-CCCcEEEEEEccchhhhhhhhcHHHHHHHHHHH-hcCCCCceeeeeeeEec----C
Q 043316 759 DDFGEK-YCIGKGRQGSVYKAEL-PSGIIFAVKKFNSQLLFDEMADQDEFLNEVLAL-TEIRHRNIIKFHGFCSN----A 831 (1031)
Q Consensus 759 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l-~~l~h~niv~l~~~~~~----~ 831 (1031)
++|.+. +.||+|+||.||+|.. .+++.||||++... ..+.+|+.++ +..+||||+++++++.. .
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 567776 7899999999999955 57999999998542 3456788887 56689999999999876 6
Q ss_pred CeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCC---CCceEEec
Q 043316 832 QHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDS---EHEAHVSD 908 (1031)
Q Consensus 832 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~D 908 (1031)
...++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 78899999999999999998653 24588999999999999999999999 9999999999999998 78899999
Q ss_pred cccccccCCCCCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCCCCCcCccchhhhhhHHHhhhhc-C
Q 043316 909 FGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHPRDYVSTNFSSFSNMITEINQNL-D 987 (1031)
Q Consensus 909 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-~ 987 (1031)
||++.... +..++.++||||+||++|||++|+.||......... ....... .
T Consensus 164 fg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----~~~~~~~~~ 216 (299)
T 3m2w_A 164 FGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----PGMKTRIRM 216 (299)
T ss_dssp CTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------CCSCCSSCT
T ss_pred cccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----HHHHHHHhh
Confidence 99987542 134678999999999999999999998644321100 0000000 0
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 988 HRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 988 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
................+.+++.+||+.||.+|||+.|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1111111111122346888999999999999999999986
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.3e-33 Score=310.89 Aligned_cols=291 Identities=20% Similarity=0.242 Sum_probs=161.8
Q ss_pred CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
.+|++++++++.++ .+|..+. ++|++|++++|++++..+..|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 36777888877776 5665553 46677777777776544446666666677777666666555666666666666666
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccccc
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
++|+++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|.++. .+.
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~ 162 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS----------------------SGI 162 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG----------------------GGB
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc----------------------cCc
Confidence 666665 4554433 455556665555554444445555555555555555532 113
Q ss_pred CCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcc
Q 043316 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364 (1031)
Q Consensus 285 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 364 (1031)
.+..|.++++|++|++++|+++. +|..+. ++|++|++++|++++..|..++.+++|++|+|++|.+++..+..+..+
T Consensus 163 ~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 163 ENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp CTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred ChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 33344444444444444444442 333222 445555555555555445555555666666666666655555555556
Q ss_pred cccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCC------ccccceecccccccc--ccccccCCC
Q 043316 365 KSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNL------TSLERLRFNQNNLFG--KVYEAFGDH 436 (1031)
Q Consensus 365 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~~--~~~~~~~~l 436 (1031)
++|++|++++|+++ .+|..+..+++|++|++++|+++++.+..|... ..|+.|++++|.+.. +.+..|..+
T Consensus 240 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~ 318 (330)
T 1xku_A 240 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV 318 (330)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTC
T ss_pred CCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccc
Confidence 66666666666655 445555556666666666666655555555332 344555555554432 334455555
Q ss_pred CCCCeeccccc
Q 043316 437 PNLTFLDLSQN 447 (1031)
Q Consensus 437 ~~L~~L~Ls~N 447 (1031)
++++.++|++|
T Consensus 319 ~~l~~l~L~~N 329 (330)
T 1xku_A 319 YVRAAVQLGNY 329 (330)
T ss_dssp CCGGGEEC---
T ss_pred cceeEEEeccc
Confidence 55555555554
No 297
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-33 Score=326.42 Aligned_cols=244 Identities=16% Similarity=0.117 Sum_probs=179.9
Q ss_pred hccCccceeecCCCccEEEEE-eCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC-Cceeee------------
Q 043316 759 DDFGEKYCIGKGRQGSVYKAE-LPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH-RNIIKF------------ 824 (1031)
Q Consensus 759 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l------------ 824 (1031)
.+|...+.||+|+||.||+|. ..+|+.||||++..... ......+.+.+|+.+++.++| ++....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC-ccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 457788999999999999996 56799999999874332 222346789999999999987 321111
Q ss_pred ---------eeeEec-----CCeeEEEEEeccCCCchhhcccC----CccccCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 043316 825 ---------HGFCSN-----AQHSFIVSEYLDRGSLTTILKDD----AAAKEFGWNQRMNVIKGVANALSYLHHDCLPPI 886 (1031)
Q Consensus 825 ---------~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 886 (1031)
+.++.. ....+++|+++ +++|.++++.. .....+++..+..++.||++||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 111111 22456777765 67999888521 1234577889999999999999999999 99
Q ss_pred eeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeeccccCccccccc----------cccCCCccccchhhhHHHH
Q 043316 887 VHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIA----------HMMRATEKYDVHSFGVLAL 956 (1031)
Q Consensus 887 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwslG~il~ 956 (1031)
+||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 99999999999999999999999999875432 344567 999999998 5556888999999999999
Q ss_pred HHHhCCCCCCCcCccchhhhhhHHHhhhhcCCCCCCCChhHHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 043316 957 EVIKGNHPRDYVSTNFSSFSNMITEINQNLDHRLPTPSRDVMDKLMSIMEVAILCLVESPEARPTMKKVCN 1027 (1031)
Q Consensus 957 elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 1027 (1031)
||+||+.||........ . . ..+. ..... ...+.+++.+||+.||++|||+.|+++
T Consensus 309 elltg~~Pf~~~~~~~~--~---~---~~~~-~~~~~-------~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG--S---E---WIFR-SCKNI-------PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGSC--S---G---GGGS-SCCCC-------CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhhh--H---H---HHHh-hcccC-------CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999865432110 0 0 0111 11111 135788999999999999999888754
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.5e-35 Score=347.00 Aligned_cols=359 Identities=16% Similarity=0.111 Sum_probs=180.9
Q ss_pred ccccEEEecccccccccCc-cccccccccccccccccccc----ccCccccccCcccEEEeecCcCCCCCCcccc-ccc-
Q 043316 197 SNLAYLYLNNNSLFGSIPN-VMGNLNSLSILDLSQNQLRG----SIPFSLANLSNLGILYLYKNSLFGFIPSVIG-NLK- 269 (1031)
Q Consensus 197 ~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~- 269 (1031)
++|++|+|++|+++..... .+..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 5677888888887644333 36677778888888877764 3455666667777777777776653333222 233
Q ss_pred ---cccccccccccccc----cCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc
Q 043316 270 ---SLFELDLSENQLFG----SIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342 (1031)
Q Consensus 270 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 342 (1031)
+|++|+|++|+++. .+|..+..+++|++|++++|.+++..+..+.. ......++
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~-------------------~l~~~~~~ 143 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE-------------------GLLDPQCR 143 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH-------------------HHTSTTCC
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH-------------------HHhcCCCc
Confidence 56677777776663 34556666666666666666654211111100 00111334
Q ss_pred CceEEcccCCCcCcc----CCccCcccccceEEccccccCCCcccccc-----CCCCCceEeccCcccCCc----Cchhc
Q 043316 343 LRTLYLYDNGFYGLV----PNEIGYLKSLSKLELCRNHLSGVIPHSIG-----NLTKLVLVNMCENHLFGL----IPKSF 409 (1031)
Q Consensus 343 L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~~~----~~~~~ 409 (1031)
|++|+|++|++++.. +..+..+++|++|++++|.++...+..+. ..++|++|++++|.++.. ++..+
T Consensus 144 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 223 (461)
T 1z7x_W 144 LEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIV 223 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHH
T ss_pred ceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHH
Confidence 555555555555422 33344445555555555555433332222 133555555555555442 23344
Q ss_pred cCCccccceeccccccccccc-----cccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCC
Q 043316 410 RNLTSLERLRFNQNNLFGKVY-----EAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDS 484 (1031)
Q Consensus 410 ~~l~~L~~L~L~~N~l~~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l 484 (1031)
..+++|++|++++|.+..... ..+..+++|++|++++|.++..... .++..+..+
T Consensus 224 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~~l~~~ 283 (461)
T 1z7x_W 224 ASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG--------------------DLCRVLRAK 283 (461)
T ss_dssp HHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH--------------------HHHHHHHHC
T ss_pred HhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHH--------------------HHHHHHhhC
Confidence 444555555555554433221 1122344555555555444322110 012233344
Q ss_pred CCCcEEEeeCCcccCCChhhhhcc-----ccCceeecccccccCC----CcccccccCccceeecCcCcCCCCCcccccC
Q 043316 485 SKLQVLDLSSNHIVGKIPVQFEKL-----FSLNKLILNLNQLSGG----VPLEFGSLTELQYLDLSANKLSSSIPKSMGN 555 (1031)
Q Consensus 485 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 555 (1031)
++|++|+|++|.+.+..+..+... ++|+.|++++|.+++. ++..+..+++|++|+|++|++++..+..+..
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 555555555555544333333322 3555555555555533 2334444555555555555555433332221
Q ss_pred -----CCccceecccCcccCC----CCchhhccccccCceeccCcccC
Q 043316 556 -----LSKLHYLNLSNNQFNH----KIPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 556 -----l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
.++|++|+|++|++++ .+|..+..+++|++|||++|+++
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 3455555555555543 34555555555555555555554
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=8.4e-36 Score=350.98 Aligned_cols=351 Identities=17% Similarity=0.112 Sum_probs=206.5
Q ss_pred CcccEEecCCCcCcCCCccc-cccCCcCcEeeCCCCcccC----CCCccccccccceEEEeeccccCCCCCcccc-Ccc-
Q 043316 101 PHLMYLNLSCNVLYGNIPPQ-ISNLSKLRALDLGNNQLSG----VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIG-KLS- 173 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~-~~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~- 173 (1031)
++|++|||++|+++...... +..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45666677666665433222 5566677777777776653 2455566666677777777666543333332 233
Q ss_pred ---cCceeeccCcccCC----CCCCcccccccccEEEecccccccccCccccc-----ccccccccccccccccc----c
Q 043316 174 ---LINVLTLCHNNFSG----RIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGN-----LNSLSILDLSQNQLRGS----I 237 (1031)
Q Consensus 174 ---~L~~L~L~~n~l~~----~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~ 237 (1031)
+|++|+|++|+++. .+|..+.++++|++|++++|.+++..+..+.. .++|++|+|++|++++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777777662 45666667777777777777765443333322 34577777777776653 3
Q ss_pred CccccccCcccEEEeecCcCCCCCCccccc-----ccccccccccccccccc----CCcccccCCCCCeeeeccCccCCC
Q 043316 238 PFSLANLSNLGILYLYKNSLFGFIPSVIGN-----LKSLFELDLSENQLFGS----IPLSFSNLSSLTLMSLFNNSLSGS 308 (1031)
Q Consensus 238 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ 308 (1031)
+..+..+++|++|++++|.++...+..+.. .++|++|+|++|++++. ++..+..+++|++|++++|++++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 445555667777777777665443333322 44677777777776643 455566667777777777766532
Q ss_pred C-----CCCCCChhhhhhhhccccccCCC----CcccccccccCceEEcccCCCcCccCCccCc-----ccccceEEccc
Q 043316 309 I-----PPTQGNLEALSELGLYINQLDGV----IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGY-----LKSLSKLELCR 374 (1031)
Q Consensus 309 ~-----p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~ 374 (1031)
. +..+..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|++|++++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 322 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCC
Confidence 1 12222355566666666665543 4555666677777777777765443333332 24677777777
Q ss_pred cccCCC----ccccccCCCCCceEeccCcccCCcCchhccC-----Cccccceecccccccc----ccccccCCCCCCCe
Q 043316 375 NHLSGV----IPHSIGNLTKLVLVNMCENHLFGLIPKSFRN-----LTSLERLRFNQNNLFG----KVYEAFGDHPNLTF 441 (1031)
Q Consensus 375 N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~ 441 (1031)
|.+++. ++..+..+++|++|++++|++.+..+..+.. .++|++|++++|.++. ..+..+..+++|++
T Consensus 323 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~ 402 (461)
T 1z7x_W 323 CSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRE 402 (461)
T ss_dssp SCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCE
T ss_pred CCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccE
Confidence 776654 3445556667777777777666554444432 4566666666666654 34445555666666
Q ss_pred eccccccccC
Q 043316 442 LDLSQNNLYG 451 (1031)
Q Consensus 442 L~Ls~N~l~~ 451 (1031)
|++++|++++
T Consensus 403 L~l~~N~i~~ 412 (461)
T 1z7x_W 403 LDLSNNCLGD 412 (461)
T ss_dssp EECCSSSCCH
T ss_pred EECCCCCCCH
Confidence 6666666654
No 300
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.5e-32 Score=306.69 Aligned_cols=228 Identities=24% Similarity=0.281 Sum_probs=217.0
Q ss_pred cCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 123 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
..+++++|+|++|+++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578999999999999 89999999999999999999999 99999999999999999999999 899999999999999
Q ss_pred EecccccccccCccccc---------ccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccc
Q 043316 203 YLNNNSLFGSIPNVMGN---------LNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFE 273 (1031)
Q Consensus 203 ~l~~n~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 273 (1031)
++++|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..+.++++|++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 99999999999988765 999999999999999 899999999999999999999997 5667999999999
Q ss_pred cccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCC
Q 043316 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGF 353 (1031)
Q Consensus 274 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 353 (1031)
|+|++|++.+.+|..|+++++|++|+|++|++.+.+|..++++++|++|++++|.+.+.+|..++++++|+.+++..+.+
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred cC
Q 043316 354 YG 355 (1031)
Q Consensus 354 ~~ 355 (1031)
..
T Consensus 314 ~~ 315 (328)
T 4fcg_A 314 AQ 315 (328)
T ss_dssp CC
T ss_pred HH
Confidence 53
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=304.05 Aligned_cols=284 Identities=20% Similarity=0.186 Sum_probs=180.0
Q ss_pred CCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCC
Q 043316 61 KISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV 140 (1031)
Q Consensus 61 ~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 140 (1031)
...+|.|.|+ |+.. +++++ .+|.. + .++|++|++++|++++..+..+.++++|++|+|++|++++.
T Consensus 26 ~~~~C~~~~~-c~~~---------~~~l~-~iP~~-~--~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (353)
T 2z80_A 26 ASLSCDRNGI-CKGS---------SGSLN-SIPSG-L--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTI 91 (353)
T ss_dssp -CCEECTTSE-EECC---------STTCS-SCCTT-C--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cCCCCCCCeE-eeCC---------CCCcc-ccccc-c--cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCcc
Confidence 4567999998 7542 22332 33432 2 25788888888888865555788888888888888888876
Q ss_pred CCccccccccceEEEeeccccCCCCCc-cccCcccCceeeccCcccCCCCCC--cccccccccEEEecccc-cccccCcc
Q 043316 141 IPQEIGHLTCLRMLYFDVNHLHGSIPL-EIGKLSLINVLTLCHNNFSGRIPP--SLGNLSNLAYLYLNNNS-LFGSIPNV 216 (1031)
Q Consensus 141 ~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~ip~--~~~~l~~L~~L~l~~n~-l~~~~p~~ 216 (1031)
.|..++++++|++|++++|++++ +|. .++++++|++|+|++|.++ .+|. .++++++|++|++++|+ +++..|..
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 92 EEDSFSSLGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred CHhhcCCCCCCCEEECCCCcCCc-CCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHH
Confidence 67778888888888888888874 444 3777888888888888877 4554 67777888888887773 55444566
Q ss_pred cccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccc---cCC
Q 043316 217 MGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFS---NLS 293 (1031)
Q Consensus 217 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~ 293 (1031)
|+++++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|++|++++|++++..+..+. ..+
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~ 249 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNS 249 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCC
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccc
Confidence 77777777777777777766677777777777777777776544333344566666666666666654333222 123
Q ss_pred CCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEcc
Q 043316 294 SLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELC 373 (1031)
Q Consensus 294 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 373 (1031)
.++.++|+++.++ +|.+. .+|..++.+++|++|+|++|+++...+..|+.+++|++|+++
T Consensus 250 ~l~~l~L~~~~l~-------------------~~~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 309 (353)
T 2z80_A 250 LIKKFTFRNVKIT-------------------DESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLH 309 (353)
T ss_dssp CCCEEEEESCBCC-------------------HHHHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred hhhcccccccccc-------------------Ccchh-hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEee
Confidence 3333333333322 12222 245556666666666666666654333334566666666666
Q ss_pred ccccCCC
Q 043316 374 RNHLSGV 380 (1031)
Q Consensus 374 ~N~l~~~ 380 (1031)
+|++.+.
T Consensus 310 ~N~~~~~ 316 (353)
T 2z80_A 310 TNPWDCS 316 (353)
T ss_dssp SSCBCCC
T ss_pred CCCccCc
Confidence 6665543
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=8.4e-34 Score=345.12 Aligned_cols=449 Identities=15% Similarity=0.089 Sum_probs=269.4
Q ss_pred CCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcC---cCCCccccc------------cCCcCc
Q 043316 64 PCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVL---YGNIPPQIS------------NLSKLR 128 (1031)
Q Consensus 64 ~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~---~~~~p~~~~------------~l~~L~ 128 (1031)
|++|.++.+.. .+... +.+ .+ +..++..+..+++|++|+|+++.. .|.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~-~~~l~--~~~-~~-~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET-REHVT--MAL-CY-TATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH-CCEEE--ESC-GG-GSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc-ccEEE--Eee-cc-ccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 44899996533 22222 221 11 223344467788999999987642 245555444 788899
Q ss_pred EeeCCCCcccCCCCcccccc--ccceEEEeeccc-cCC-CCCccccCcccCceeeccCcccCCC----CCCccccccccc
Q 043316 129 ALDLGNNQLSGVIPQEIGHL--TCLRMLYFDVNH-LHG-SIPLEIGKLSLINVLTLCHNNFSGR----IPPSLGNLSNLA 200 (1031)
Q Consensus 129 ~L~l~~n~l~~~~p~~~~~l--~~L~~L~l~~n~-l~~-~~p~~~~~l~~L~~L~L~~n~l~~~----ip~~~~~l~~L~ 200 (1031)
+|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999998887777777764 449999998876 221 1233344778888999998888765 444556788888
Q ss_pred EEEecccccc----cccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC---CCCCccccccccccc
Q 043316 201 YLYLNNNSLF----GSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF---GFIPSVIGNLKSLFE 273 (1031)
Q Consensus 201 ~L~l~~n~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~ 273 (1031)
+|++++|.++ +.++..+.++++|++|+|++|.+.+ +|..+.++++|+.|+++.+... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 8888888886 3455566778888888888888884 6777888888888888754332 233456677778888
Q ss_pred cccccccccccCCcccccCCCCCeeeeccCccCCCCC-CCCCChhhhhhhhccccccCCCCcccccccccCceEEccc--
Q 043316 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIP-PTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYD-- 350 (1031)
Q Consensus 274 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-- 350 (1031)
|+++++.. +.+|..+..+++|++|+|++|.+++... ..+.++++|+.|+++++...+.++..+..+++|++|++++
T Consensus 275 L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~ 353 (592)
T 3ogk_B 275 LGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGA 353 (592)
T ss_dssp EEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCC
T ss_pred cCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCc
Confidence 88877543 3566677777788888888877654322 2345666677777663322223333345566677777762
Q ss_pred ---------CCCcCccC-CccCcccccceEEccccccCCCccccccC-CCCCceEecc----CcccCCc-----Cchhcc
Q 043316 351 ---------NGFYGLVP-NEIGYLKSLSKLELCRNHLSGVIPHSIGN-LTKLVLVNMC----ENHLFGL-----IPKSFR 410 (1031)
Q Consensus 351 ---------N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~~-----~~~~~~ 410 (1031)
|.+++... .....+++|++|+++.|.+++..+..+.. +++|+.|+++ .|++++. .+..+.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~ 433 (592)
T 3ogk_B 354 DEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLI 433 (592)
T ss_dssp CSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHH
T ss_pred cccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHH
Confidence 44443211 12334566666666666666555555544 6666666664 4455543 222344
Q ss_pred CCccccceecccc--ccccccccccC-CCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCC
Q 043316 411 NLTSLERLRFNQN--NLFGKVYEAFG-DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKL 487 (1031)
Q Consensus 411 ~l~~L~~L~L~~N--~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L 487 (1031)
++++|++|++++| .++......+. .+++|+.|++++|++++. .++..+..+++|
T Consensus 434 ~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~-----------------------~~~~~~~~~~~L 490 (592)
T 3ogk_B 434 GCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE-----------------------GLMEFSRGCPNL 490 (592)
T ss_dssp HCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH-----------------------HHHHHHTCCTTC
T ss_pred hCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH-----------------------HHHHHHhcCccc
Confidence 4555555555432 23333322222 244555555555444321 112233455677
Q ss_pred cEEEeeCCcccCC-ChhhhhccccCceeecccccccCCCcccc-cccCccceeecCc
Q 043316 488 QVLDLSSNHIVGK-IPVQFEKLFSLNKLILNLNQLSGGVPLEF-GSLTELQYLDLSA 542 (1031)
Q Consensus 488 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~ 542 (1031)
++|+|++|.+++. ++..+..+++|+.|+|++|++++.....+ ..++.++...+..
T Consensus 491 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 491 QKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp CEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred CeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 7777777776543 23334556777777777777765433222 2345554444443
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=4.6e-31 Score=292.43 Aligned_cols=250 Identities=24% Similarity=0.294 Sum_probs=186.4
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCcc-ccccCCcCcEeeCCCCcccC--CC
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSG--VI 141 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~--~~ 141 (1031)
|.|.+|.|+..+ ++ .+|.. -.++|++|+|++|+++ .+|+ .+.++++|++|+|++|+++. .+
T Consensus 7 C~~~~l~c~~~~-l~-----------~ip~~---~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 7 CSGTEIRCNSKG-LT-----------SVPTG---IPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp EETTEEECCSSC-CS-----------SCCSC---CCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred eCCCEEEcCCCC-cc-----------cCCCC---CCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCc
Confidence 799999997532 11 22321 2367899999999988 5555 46889999999999998873 34
Q ss_pred CccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCC-CcccccccccEEEecccccccccCcccccc
Q 043316 142 PQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIP-PSLGNLSNLAYLYLNNNSLFGSIPNVMGNL 220 (1031)
Q Consensus 142 p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 220 (1031)
|..+..+++|++|++++|.++ .+|..+..+++|++|++++|.+++..+ ..+.++++|++|++++|.+++..|..++++
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 149 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC
T ss_pred ccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC
Confidence 667777888888888888887 677778888888888888888885444 578888888888888888887777778888
Q ss_pred ccccccccccccccc-ccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeee
Q 043316 221 NSLSILDLSQNQLRG-SIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMS 299 (1031)
Q Consensus 221 ~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 299 (1031)
++|++|+|++|++++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 888888888888875 5677777888888888888888777777777777777888877777766666677777777777
Q ss_pred eccCccCCCCCCCCCCh-hhhhhhhccccccCC
Q 043316 300 LFNNSLSGSIPPTQGNL-EALSELGLYINQLDG 331 (1031)
Q Consensus 300 L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~ 331 (1031)
+++|++++..|..+..+ ++|++|++++|.+++
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 77777776666555555 255555555555544
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=7.7e-31 Score=290.61 Aligned_cols=248 Identities=25% Similarity=0.275 Sum_probs=152.1
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccC--CCCCccccCcccCceeecc
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLH--GSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~--~~~p~~~~~l~~L~~L~L~ 181 (1031)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..++++++|++|+|++|+++ +.+|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35667777776 6666543 57888888888887333334677777888888777776 2235566667777777777
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccC-cccccccccccccccccccccccCccccccCcccEEEeecCcCCC-
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG- 259 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~- 259 (1031)
+|.++ .+|..+.++++|++|++++|++++..+ ..+.++++|++|++++|++++..|..+..+++|++|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 77766 566666667777777777777664333 456666666666666666666556666666666666666666654
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccc
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 339 (1031)
.+|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+ ..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------------------------~~~~~ 221 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT------------------------FPYKC 221 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS------------------------GGGTT
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh------------------------hhccC
Confidence 355556666666666666666655555555555555555555555554333 34444
Q ss_pred cccCceEEcccCCCcCccCCccCccc-ccceEEccccccCC
Q 043316 340 LSSLRTLYLYDNGFYGLVPNEIGYLK-SLSKLELCRNHLSG 379 (1031)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 379 (1031)
+++|++|+|++|.+++..|..+..++ +|++|++++|.+++
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 55555555555555555555555542 55555555555543
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.9e-32 Score=331.59 Aligned_cols=258 Identities=15% Similarity=0.083 Sum_probs=126.6
Q ss_pred CCccccccccceEEEeecccc---CCCCCcccc------------CcccCceeeccCcccCCCCCCccccc--ccccEEE
Q 043316 141 IPQEIGHLTCLRMLYFDVNHL---HGSIPLEIG------------KLSLINVLTLCHNNFSGRIPPSLGNL--SNLAYLY 203 (1031)
Q Consensus 141 ~p~~~~~l~~L~~L~l~~n~l---~~~~p~~~~------------~l~~L~~L~L~~n~l~~~ip~~~~~l--~~L~~L~ 203 (1031)
++..+..+++|++|+|+++.. .|.+|..++ .+++|++|+|++|.+++..+..++.+ ++|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 344456677777777766432 134444333 45556666666655554444444443 3356666
Q ss_pred ecccc-ccc-ccCcccccccccccccccccccccc----cCccccccCcccEEEeecCcCCC----CCCccccccccccc
Q 043316 204 LNNNS-LFG-SIPNVMGNLNSLSILDLSQNQLRGS----IPFSLANLSNLGILYLYKNSLFG----FIPSVIGNLKSLFE 273 (1031)
Q Consensus 204 l~~n~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~ 273 (1031)
|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|+.|++++|.+++ .++..+.++++|++
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~ 224 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVS 224 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCE
T ss_pred CcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcE
Confidence 55554 110 1222223455555555555555433 22233445555555555555542 12223344455555
Q ss_pred cccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCC
Q 043316 274 LDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGF 353 (1031)
Q Consensus 274 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 353 (1031)
|+|++|.+.+ +|..+.++++|+.|+++.+... ++ .+..+..+..+++|+.|+++++..
T Consensus 225 L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~--~~-------------------~~~~~~~l~~~~~L~~L~l~~~~~ 282 (592)
T 3ogk_B 225 VKVGDFEILE-LVGFFKAAANLEEFCGGSLNED--IG-------------------MPEKYMNLVFPRKLCRLGLSYMGP 282 (592)
T ss_dssp EECSSCBGGG-GHHHHHHCTTCCEEEECBCCCC--TT-------------------CTTSSSCCCCCTTCCEEEETTCCT
T ss_pred EeccCccHHH-HHHHHhhhhHHHhhcccccccc--cc-------------------hHHHHHHhhccccccccCccccch
Confidence 5555555543 3444555555555555432111 00 012234455666777777766533
Q ss_pred cCccCCccCcccccceEEccccccCCCcc-ccccCCCCCceEeccCcccCCcCchhccCCccccceecc
Q 043316 354 YGLVPNEIGYLKSLSKLELCRNHLSGVIP-HSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421 (1031)
Q Consensus 354 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~ 421 (1031)
+.+|..+..+++|++|++++|.+++... ..+..+++|++|+++++-.....+..+..+++|++|+++
T Consensus 283 -~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 283 -NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp -TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred -hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 3455566666777777777776544322 234556666666666222112222223444555555555
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.1e-31 Score=297.77 Aligned_cols=249 Identities=22% Similarity=0.238 Sum_probs=148.8
Q ss_pred cCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcc-cCCCCcccc-------ccccceEEEeeccccCCCCCccc
Q 043316 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQL-SGVIPQEIG-------HLTCLRMLYFDVNHLHGSIPLEI 169 (1031)
Q Consensus 98 ~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l-~~~~p~~~~-------~l~~L~~L~l~~n~l~~~~p~~~ 169 (1031)
+..++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3455667777777777 667666554 77777777777 345666555 56777777777777776677665
Q ss_pred --cCcccCceeeccCcccCCCCCCccccc-----ccccEEEecccccccccCcccccccccccccccccccccc--cCcc
Q 043316 170 --GKLSLINVLTLCHNNFSGRIPPSLGNL-----SNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS--IPFS 240 (1031)
Q Consensus 170 --~~l~~L~~L~L~~n~l~~~ip~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~ 240 (1031)
+.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. +|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 6677777777777777654 6666666 6677777777766655556666666666666666666543 2223
Q ss_pred c--cccCcccEEEeecCcCCCC---CCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCC
Q 043316 241 L--ANLSNLGILYLYKNSLFGF---IPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN 315 (1031)
Q Consensus 241 l--~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 315 (1031)
+ ..+++|++|+|++|++++. ....+.++++|++|+|++|++++..|. ..+..
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-----------------------~~~~~ 251 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA-----------------------PSCDW 251 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC-----------------------SCCCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch-----------------------hhhhh
Confidence 3 5556666666666655521 112223445555555555555544331 23333
Q ss_pred hhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCC
Q 043316 316 LEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSG 379 (1031)
Q Consensus 316 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 379 (1031)
+++|++|++++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|++|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 444444455555544 3444444 5666666666666655 44 6666666677777666654
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=4e-31 Score=293.42 Aligned_cols=254 Identities=22% Similarity=0.201 Sum_probs=174.5
Q ss_pred ccccCCcCcEeeCCCCcccCCCCccccccccceEEEeecccc-CCCCCcccc-------CcccCceeeccCcccCCCCCC
Q 043316 120 QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHL-HGSIPLEIG-------KLSLINVLTLCHNNFSGRIPP 191 (1031)
Q Consensus 120 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l-~~~~p~~~~-------~l~~L~~L~L~~n~l~~~ip~ 191 (1031)
.++..++|++|++++|.+ .+|..+... |++|+|++|++ .+.+|..++ ++++|++|+|++|++++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 356777888888988888 778777655 88888888888 456776665 677777777777777777777
Q ss_pred cc--cccccccEEEecccccccccCcccccc-----cccccccccccccccccCccccccCcccEEEeecCcCCCC--CC
Q 043316 192 SL--GNLSNLAYLYLNNNSLFGSIPNVMGNL-----NSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF--IP 262 (1031)
Q Consensus 192 ~~--~~l~~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~p 262 (1031)
.+ +++++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..++++++|++|+|++|++.+. .|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 65 7777777777777777755 6666665 5566666666666554445555555555555555555433 12
Q ss_pred ccc--cccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCc-ccccc
Q 043316 263 SVI--GNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIP-PSIGN 339 (1031)
Q Consensus 263 ~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~ 339 (1031)
..+ .++++|++|+|++|++++. + +.....+.++++|++|++++|++++.+| ..+..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~-~--------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETP-S--------------------GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCH-H--------------------HHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred HHHHhccCCCCCEEECCCCcCcch-H--------------------HHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 222 4444555555555544411 0 0001122334555666666666666654 45677
Q ss_pred cccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCc
Q 043316 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGL 404 (1031)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 404 (1031)
+++|++|+|++|+++ .+|..+. ++|++|++++|++++. |. +..+++|++|++++|++++.
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 899999999999998 5677766 8999999999999977 65 99999999999999999763
No 308
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4.5e-30 Score=290.49 Aligned_cols=283 Identities=20% Similarity=0.149 Sum_probs=167.9
Q ss_pred ccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccc
Q 043316 147 HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSIL 226 (1031)
Q Consensus 147 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 226 (1031)
.++.....++++|.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|++++|++++..|..|+++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 3444455677777776 6666554 367777777777775444467777777777777777766556667777777777
Q ss_pred cccccccccccCccccccCcccEEEeecCcCCCCCC-ccccccccccccccccc-cccccCCcccccCCCCCeeeeccCc
Q 043316 227 DLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP-SVIGNLKSLFELDLSEN-QLFGSIPLSFSNLSSLTLMSLFNNS 304 (1031)
Q Consensus 227 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~ 304 (1031)
+|++|++++..+..++++++|++|+|++|++++..+ ..+.++++|++|++++| .+.+..|..|.++++|++|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 777777764333346666777777777776665433 35666666666666666 3554445566666666666666666
Q ss_pred cCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCcccc
Q 043316 305 LSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHS 384 (1031)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 384 (1031)
+++..|..+.++++|++|++++|++....+..+..+++|++|++++|++++..+..+..
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------- 244 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST--------------------- 244 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-------------------------
T ss_pred cCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc---------------------
Confidence 66555555655556666666655554322222334555555555555555443332211
Q ss_pred ccCCCCCceEeccCcccCC----cCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcc
Q 043316 385 IGNLTKLVLVNMCENHLFG----LIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEI 453 (1031)
Q Consensus 385 ~~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 453 (1031)
......++.++++++.+.+ .+|..+..+++|++|++++|+++.++...|..+++|++|+|++|++.+..
T Consensus 245 ~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 245 GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp --CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 1123344444444444443 23455666666666666666666666666667777777777777766543
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=4.5e-30 Score=307.92 Aligned_cols=299 Identities=28% Similarity=0.336 Sum_probs=185.5
Q ss_pred CccCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCc
Q 043316 47 SLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSK 126 (1031)
Q Consensus 47 ~~~~sw~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~ 126 (1031)
...++|. .+.+||.|+|..|..... ..+....++.|++++|.++ .+|..+. ++
T Consensus 10 ~~w~~W~------~~~~~~~~~~r~~~~~~~------------------~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~ 62 (622)
T 3g06_A 10 AVWSAWR------RAAPAEESRGRAAVVQKM------------------RACLNNGNAVLNVGESGLT-TLPDCLP--AH 62 (622)
T ss_dssp CHHHHHH------HTCCGGGHHHHHHHHHHH------------------HHHHHHCCCEEECCSSCCS-CCCSCCC--TT
T ss_pred HHHHHHH------hcCCcchhccccccCccc------------------ccccCCCCcEEEecCCCcC-ccChhhC--CC
Confidence 4566786 456889998865421100 0011123566666666666 5666554 56
Q ss_pred CcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecc
Q 043316 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNN 206 (1031)
Q Consensus 127 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~ 206 (1031)
|++|+|++|+++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|++|.++ .+|. .+++|++|++++
T Consensus 63 L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~ 130 (622)
T 3g06_A 63 ITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFG 130 (622)
T ss_dssp CSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCS
T ss_pred CcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCC
Confidence 777777777666 4554 4566677777777666 4555 5566677777777766 3554 456677777777
Q ss_pred cccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCC
Q 043316 207 NSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIP 286 (1031)
Q Consensus 207 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 286 (1031)
|+++ .+|.. +++|++|+|++|++++ +|. .+++|+.|++++|.+++ +| ..+++|+.|+|++|++++ +|
T Consensus 131 N~l~-~lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~ 197 (622)
T 3g06_A 131 NQLT-SLPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LP 197 (622)
T ss_dssp SCCS-CCCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CC
T ss_pred CCCC-cCCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CC
Confidence 7766 35543 3667777777777663 443 23566777777777765 33 345667777777777763 44
Q ss_pred cccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccc
Q 043316 287 LSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKS 366 (1031)
Q Consensus 287 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 366 (1031)
.. +++|+.|++++|.++ .+|.. +++|+.|++++|++++ +| ..+++|++|+|++|+++.. |. .+++
T Consensus 198 ~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~l-p~---~~~~ 262 (622)
T 3g06_A 198 TL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSL-PM---LPSG 262 (622)
T ss_dssp CC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CC---CCTT
T ss_pred Cc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcC-Cc---cccc
Confidence 32 356777777777776 34432 3556666667676664 34 3446777777777777643 43 4567
Q ss_pred cceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCc
Q 043316 367 LSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLT 413 (1031)
Q Consensus 367 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 413 (1031)
|+.|+|++|+|+ .+|..+.++++|+.|++++|.+.+..|..|..++
T Consensus 263 L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 263 LLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 777777777776 5566677777777777777777766666555443
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6.9e-29 Score=290.60 Aligned_cols=247 Identities=26% Similarity=0.254 Sum_probs=151.9
Q ss_pred ccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
...++.+++.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 455666666665 5665543 5677777777777766666677777777777777777655556666777777777777
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccC-ccccccCcccEEEeecCcCCCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP-FSLANLSNLGILYLYKNSLFGFI 261 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~ 261 (1031)
|++++..+..|+++++|++|+|++|++++..+..|.++++|++|+|++|...+.+| ..+.++++|+.|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 77664444556667777777777777664444566666666666666633222333 3456666666666666666543
Q ss_pred CccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccc
Q 043316 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLS 341 (1031)
Q Consensus 262 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 341 (1031)
| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++ ..|..|..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------------~~~~~~~~l~ 266 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL------------------------IERNAFDGLA 266 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE------------------------ECTTTTTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce------------------------ECHHHhcCCC
Confidence 2 35555566666666666655555555555555555555555554 4444555556
Q ss_pred cCceEEcccCCCcCccCCccCcccccceEEccccccC
Q 043316 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLS 378 (1031)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 378 (1031)
+|++|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 267 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 267 SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 6666666666666555555666666666666666654
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.3e-29 Score=275.60 Aligned_cols=208 Identities=22% Similarity=0.212 Sum_probs=148.2
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccc-cCCCCCccccCcccCcee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNH-LHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L 178 (1031)
.++|++|++++|.+++..|..++.+++|++|+|++|.+++..|..++++++|++|++++|. +++..|..++.+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4577788888888776555667777788888888777776667777777777777777776 554446677777777777
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
+|++|.+++..|..+.++++|++|++++|++++..+..|+++++|++|+|++|++++..+..+..+++|+.|+|++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 77777777666677777777777777777777555556777777777777777777544455677777777777777777
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCC
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
+..|..|.++++|++|++++|++++..+..+..+++|+.|++++|.+..
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 6666677777777777777777765555556667777777777776653
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.9e-29 Score=273.83 Aligned_cols=254 Identities=23% Similarity=0.264 Sum_probs=149.3
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN 183 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1031)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..|..++++++|++|++++|.+++..|..++.+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56777777776 566544 457788888888877655566777777777777777777655666777777777777777
Q ss_pred c-cCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCC
Q 043316 184 N-FSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP 262 (1031)
Q Consensus 184 ~-l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 262 (1031)
. ++...|..+.++++|++|++++|++++..|..|+++++|++|+|++|++++..+..++.+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 554446666666777777777766665555666666666666666666664444445555556666665555555444
Q ss_pred ccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc
Q 043316 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342 (1031)
Q Consensus 263 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 342 (1031)
..|.++++|++|+|++|++++..|..|.++++|+.|++++|+++ +..+..+..+++
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------------~~~~~~~~~l~~ 226 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS------------------------ALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS------------------------CCCHHHHTTCTT
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCC------------------------cCCHHHcccCcc
Confidence 44555555555555555555444444555555555554444444 333344555556
Q ss_pred CceEEcccCCCcCccCCccCcccccceEEccccccCCCccccc
Q 043316 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSI 385 (1031)
Q Consensus 343 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 385 (1031)
|++|++++|.+....+.. .....++.+..+.+.+....|..+
T Consensus 227 L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp CCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGG
T ss_pred cCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHh
Confidence 666666666554332211 111223344444555544444443
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=4.5e-28 Score=283.68 Aligned_cols=226 Identities=27% Similarity=0.268 Sum_probs=130.8
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
+|++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 44555555555554445555555555555555555554445555555555555555555554444445556666666666
Q ss_pred cCcCCCCCCccccccccccccccccc-cccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSEN-QLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 332 (1031)
+|++++..+..|.++++|++|+|++| .+....+..|.++++|++|+|++|++++ +| .+..+++|++|+|++|++++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCccc
Confidence 66665555555666666666666663 3332223356667777777777776663 22 344555555555555555555
Q ss_pred CcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCccc
Q 043316 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHL 401 (1031)
Q Consensus 333 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 401 (1031)
.|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++|.+
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 566666666666666666666666666666666666666666666655555555555555555555554
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.7e-28 Score=281.79 Aligned_cols=225 Identities=26% Similarity=0.273 Sum_probs=103.3
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
+++.|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 44444444444444444445555555555555555544444445555555555555555553333345555555555555
Q ss_pred cCcCCCCCCcccccccccccccccccc-ccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQ-LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGV 332 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 332 (1031)
+|++++..+..|.++++|++|+|++|+ +....+..|.++++|++|+|++|+++ .+| .+..+++|++|+|++|++++.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCcc
Confidence 555554444455555555555555532 22222234555555555555555555 222 233333333333333333333
Q ss_pred CcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcc
Q 043316 333 IPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH 400 (1031)
Q Consensus 333 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 400 (1031)
.|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np 290 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNP 290 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSC
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCC
Confidence 33444444444444444444444444444444444444444444443333333344444444444433
No 315
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.3e-28 Score=282.05 Aligned_cols=227 Identities=26% Similarity=0.231 Sum_probs=103.7
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|++++..+..+.++++|++|+|++|++++..|..|.++++|++|+|++|+++
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~------------------ 125 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT------------------ 125 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCS------------------
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCC------------------
Confidence 44555555555555444455555555555555555555444444555555555555555444
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccC-ccccccCcccEEEeecCcCCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIP-FSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
+..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+..+.++ ..|.++++|++|+|++|+++.
T Consensus 126 ------~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 126 ------TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp ------SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred ------eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 2222334444444444444444443333344444444444444422211222 234444444444444444442
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccc
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 339 (1031)
. | .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++. .+..|.+
T Consensus 200 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------------------------~~~~~~~ 253 (440)
T 3zyj_A 200 I-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI------------------------ERNAFDN 253 (440)
T ss_dssp C-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE------------------------CTTSSTT
T ss_pred c-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEE------------------------ChhhhcC
Confidence 2 2 234444444444444444444444444444444444444444332 3333344
Q ss_pred cccCceEEcccCCCcCccCCccCcccccceEEcccccc
Q 043316 340 LSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHL 377 (1031)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 377 (1031)
+++|++|+|++|++++..+..|..+++|+.|+|++|.+
T Consensus 254 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 254 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred CCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 44444444444444444444444445555555555544
No 316
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.9e-29 Score=299.21 Aligned_cols=188 Identities=19% Similarity=0.141 Sum_probs=134.9
Q ss_pred eecCCCccEEEE-EeCCCcEEEEEEccchhhh------hhhhcHHHHHHHHHHHhcC-CCCceeeeeeeEecCCeeEEEE
Q 043316 767 IGKGRQGSVYKA-ELPSGIIFAVKKFNSQLLF------DEMADQDEFLNEVLALTEI-RHRNIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 767 lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~------~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 838 (1031)
.+.|+.|.+..+ +...|+.||||++.+.... ......++|.+|+++++++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 556777777666 4446899999999664321 1233456799999999999 6999999999999999999999
Q ss_pred EeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCC
Q 043316 839 EYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPH 918 (1031)
Q Consensus 839 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 918 (1031)
||++|++|.++++... +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|++||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999998754 34443 5899999999999999 9999999999999999999999999999987655
Q ss_pred CCCceeeccccCccccccccccCCCccccchhhhHHHHHHHhCCCC
Q 043316 919 SSNWTAFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 919 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG~~P 964 (1031)
.......+||+.|||||++.+ .+..++|+||+|++.+++.++..|
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 555667889999999999876 567789999999999888766443
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6.6e-29 Score=276.20 Aligned_cols=268 Identities=21% Similarity=0.232 Sum_probs=196.5
Q ss_pred cCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecc
Q 043316 342 SLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFN 421 (1031)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~ 421 (1031)
+++.++++.+.+...++..+..+++|++|++++|++++..|..|..+++|++|++++|++++..+ |..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45556666776665555555666777777777777777666777777777777777777766544 6666677777777
Q ss_pred ccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCC
Q 043316 422 QNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKI 501 (1031)
Q Consensus 422 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 501 (1031)
+|++.++.. .++|+.|++++|+++++ .+. .+++|++|++++|++++..
T Consensus 89 ~n~l~~l~~-----~~~L~~L~l~~n~l~~~------------------------~~~---~~~~L~~L~l~~N~l~~~~ 136 (317)
T 3o53_A 89 NNYVQELLV-----GPSIETLHAANNNISRV------------------------SCS---RGQGKKNIYLANNKITMLR 136 (317)
T ss_dssp SSEEEEEEE-----CTTCCEEECCSSCCSEE------------------------EEC---CCSSCEEEECCSSCCCSGG
T ss_pred CCccccccC-----CCCcCEEECCCCccCCc------------------------Ccc---ccCCCCEEECCCCCCCCcc
Confidence 666655442 25666666666655533 222 2466888888888888777
Q ss_pred hhhhhccccCceeecccccccCCCcccc-cccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccc
Q 043316 502 PVQFEKLFSLNKLILNLNQLSGGVPLEF-GSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKL 580 (1031)
Q Consensus 502 p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 580 (1031)
+..+..+++|+.|++++|++++..+..+ ..+++|++|+|++|++++. + ....+++|++|+|++|+|++..+ .|..+
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l 213 (317)
T 3o53_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSA 213 (317)
T ss_dssp GBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGG
T ss_pred chhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchh-hhccc
Confidence 7788888888888888888887666666 4678888888888888754 3 23347889999999999886544 48888
Q ss_pred cccCceeccCcccCCcCCccccCcccchhhhcCCCccC-CCCccccccCCcceEEeccc-ccccCCCCC
Q 043316 581 IHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLF-DLIPGCFEEMRSLSRIDIAY-NELQGPIPN 647 (1031)
Q Consensus 581 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~ 647 (1031)
++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +..|..+..+++|+.+++++ +.++|..|.
T Consensus 214 ~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 214 AGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred CcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 89999999999988 57778888889999999999998 66678888888999999884 456665553
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.4e-26 Score=277.54 Aligned_cols=263 Identities=25% Similarity=0.332 Sum_probs=181.6
Q ss_pred CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
.++++|++++|.++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 46899999999998 8888776 79999999999998 6777 5788999999999988 6777 6789999999
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccccc
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
++|++++ +|. .+++|++|++++|+++ .+|.. +++|++|+|++|++++. |. .+++|+.|++++|++++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-
Confidence 9999884 555 5678888999999888 46654 37888888888888763 43 24678888888888874
Q ss_pred CCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcc
Q 043316 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364 (1031)
Q Consensus 285 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 364 (1031)
+| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++. +|.. +++|++|+|++|++++. | ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~l-p---~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSL-P---VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-C---CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCcC-C---CCC
Confidence 55 456778888888888874 4432 3556666666666663 3432 35666666666666552 3 334
Q ss_pred cccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecccccccccccc
Q 043316 365 KSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE 431 (1031)
Q Consensus 365 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 431 (1031)
++|+.|++++|+|+. +|. .+++|+.|++++|+|+. +|..|.++++|+.|+|++|.+.+..+.
T Consensus 241 ~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~~-lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 241 SELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCCS-CCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCCc-CCHHHhhccccCEEEecCCCCCCcCHH
Confidence 566666666666653 333 44555555555555553 244455555555555555544444433
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.6e-28 Score=273.00 Aligned_cols=267 Identities=19% Similarity=0.173 Sum_probs=212.8
Q ss_pred hhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccC
Q 043316 319 LSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCE 398 (1031)
Q Consensus 319 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 398 (1031)
++..+++.+.+...++..+..+++|++|+|++|++++..|..|..+++|++|++++|++++..+ +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4456777777776666667778899999999999999888899999999999999999987655 99999999999999
Q ss_pred cccCCcCchhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCC
Q 043316 399 NHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIP 478 (1031)
Q Consensus 399 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p 478 (1031)
|+++++. ..++|++|++++|++.++.+.. +++|+.|++++|+++++..
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~------------------------ 137 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRD------------------------ 137 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGG------------------------
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccc------------------------
Confidence 9998754 3489999999999998887654 5678899988887775443
Q ss_pred CCccCCCCCcEEEeeCCcccCCChhhhh-ccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCC
Q 043316 479 PEIGDSSKLQVLDLSSNHIVGKIPVQFE-KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLS 557 (1031)
Q Consensus 479 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 557 (1031)
..+..+++|++|+|++|++++..+..+. .+++|+.|+|++|++++. + ....+++|++|+|++|++++ +|..+..++
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~ 214 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAA 214 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGT
T ss_pred hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccC
Confidence 3445566777777777777766666553 577788888888877744 2 22347889999999999885 455588888
Q ss_pred ccceecccCcccCCCCchhhccccccCceeccCcccC-CcCCccccCcccchhhhcCCC-ccCCCCcc
Q 043316 558 KLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ-GEIPPQICNMESLEELNLSHN-NLFDLIPG 623 (1031)
Q Consensus 558 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~ 623 (1031)
+|++|+|++|+|+. +|..+..+++|+.|+|++|++. +.+|..+..+++|+.|++++| .+++..|.
T Consensus 215 ~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 215 GVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 99999999999874 5777888899999999999998 677888889999999999844 56665443
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=8.3e-27 Score=252.89 Aligned_cols=218 Identities=28% Similarity=0.324 Sum_probs=142.2
Q ss_pred CCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCC
Q 043316 62 ISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVI 141 (1031)
Q Consensus 62 ~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 141 (1031)
.|+|.|.|+.|.-.+.++.++++ +++++ .+|..+. ++|++|+|++|++++..
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~-------------------------~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~ 53 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCS-------------------------SKKLT-AIPSNIP--ADTKKLDLQSNKLSSLP 53 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECT-------------------------TSCCS-SCCSCCC--TTCSEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEcc-------------------------CCCCC-ccCCCCC--CCCCEEECcCCCCCeeC
Confidence 38999999999643333344444 44444 3444332 45566666666665444
Q ss_pred CccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccccc
Q 043316 142 PQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLN 221 (1031)
Q Consensus 142 p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 221 (1031)
+..|+++++|++|+|++|++++..+..+.++++|++|+|++|.+++..+..+.++++|++|++++|++++..|..|++++
T Consensus 54 ~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 133 (270)
T 2o6q_A 54 SKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT 133 (270)
T ss_dssp TTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCc
Confidence 44566666666666666666532223345666666666666666644445566677777777777777655556667777
Q ss_pred ccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeec
Q 043316 222 SLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLF 301 (1031)
Q Consensus 222 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 301 (1031)
+|++|+|++|++++..+..+..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEec
Confidence 77777777777775444556777777777777777777666667777777777777777776555567777888888888
Q ss_pred cCccCC
Q 043316 302 NNSLSG 307 (1031)
Q Consensus 302 ~N~l~~ 307 (1031)
+|.+..
T Consensus 214 ~N~~~c 219 (270)
T 2o6q_A 214 ENPWDC 219 (270)
T ss_dssp SSCBCC
T ss_pred CCCeeC
Confidence 887764
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=7.7e-28 Score=283.18 Aligned_cols=234 Identities=24% Similarity=0.191 Sum_probs=142.5
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+| ++.+++|++|+|++|.+++ +| ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC----CCCCcCEEE
Confidence 3467777777777776666677777777777777777775544 7777777777777777763 22 236677777
Q ss_pred ccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCcccc-ccCcccEEEeecCcCC
Q 043316 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLA-NLSNLGILYLYKNSLF 258 (1031)
Q Consensus 180 L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~ 258 (1031)
|++|.+++..+. .+++|++|+|++|.+++..|..++++++|++|+|++|++++..|..+. .+++|+.|+|++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 777777654443 346677777777777766666666777777777777777666666654 5666777777777666
Q ss_pred CCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccC-CCCcccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD-GVIPPSI 337 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~ 337 (1031)
+..+ +..+++|++|+|++|++++. |..|..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|.++
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred cccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 5422 23466666666666666643 3336666666666666666653 4444444444444444444443 2333333
Q ss_pred cccccCceEE
Q 043316 338 GNLSSLRTLY 347 (1031)
Q Consensus 338 ~~l~~L~~L~ 347 (1031)
..++.|+.|+
T Consensus 259 ~~l~~L~~l~ 268 (487)
T 3oja_A 259 SKNQRVQTVA 268 (487)
T ss_dssp TTCHHHHHHH
T ss_pred HhCCCCcEEe
Confidence 3333333333
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=3.6e-28 Score=285.95 Aligned_cols=236 Identities=18% Similarity=0.173 Sum_probs=132.1
Q ss_pred CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.+++ +| ..++|++|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~----~~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE----ECTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC----CCCCcCEEEC
Confidence 367777777777776656666666666666666666664443 5666666666666666652 22 1255555555
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccccc
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
++|.+++..+. .+++|++|+|++|++++..|..++.+++|+.|+|++|.+++.+|..+.
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~------------------ 165 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA------------------ 165 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG------------------
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh------------------
Confidence 55555543332 234455555555555544444444455555555555555444444443
Q ss_pred CCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcc
Q 043316 285 IPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYL 364 (1031)
Q Consensus 285 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 364 (1031)
..+++|+.|+|++|.+++..+ ...+++|+.|+|++|.+++. |+.++.+++|+.|+|++|.+++ +|..+..+
T Consensus 166 -----~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 166 -----ASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp -----GGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred -----hhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 144445555555554443311 12345555555555555543 3346666667777777776664 45556666
Q ss_pred cccceEEccccccC-CCccccccCCCCCceEecc
Q 043316 365 KSLSKLELCRNHLS-GVIPHSIGNLTKLVLVNMC 397 (1031)
Q Consensus 365 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~ 397 (1031)
++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 67777777777665 4556666666666666664
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=4.1e-29 Score=303.94 Aligned_cols=452 Identities=14% Similarity=0.112 Sum_probs=225.9
Q ss_pred EEecCCCcCcCCCcc-ccccCCcCcEeeCCCCcccC---CCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 105 YLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSG---VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~---~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
.+++++.. +..|. .+..+++|++|+|+++.... ..|..++.. ....++.....+++|++|+|
T Consensus 47 ~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~------------~~~~l~~l~~~~~~L~~L~L 112 (594)
T 2p1m_B 47 KVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGY------------VYPWIEAMSSSYTWLEEIRL 112 (594)
T ss_dssp EEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCB------------CHHHHHHHHHHCTTCCEEEE
T ss_pred EEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccch------------hhHHHHHHHHhCCCCCeEEe
Confidence 45555433 23343 45678889999998875321 122211100 00001111223445555555
Q ss_pred cCcccCCCCCCccc-ccccccEEEeccc-ccccc-cCcccccccccccccccccccccccCccc----cccCcccEEEee
Q 043316 181 CHNNFSGRIPPSLG-NLSNLAYLYLNNN-SLFGS-IPNVMGNLNSLSILDLSQNQLRGSIPFSL----ANLSNLGILYLY 253 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~-~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l----~~l~~L~~L~L~ 253 (1031)
++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+++|+.|+++
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~ 192 (594)
T 2p1m_B 113 KRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNIS 192 (594)
T ss_dssp ESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECT
T ss_pred eCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEec
Confidence 55555444444443 4555566666555 33321 33333455566666666665554333322 244566666666
Q ss_pred cCc--CCC-CCCccccccccccccccccc-cccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhcccccc
Q 043316 254 KNS--LFG-FIPSVIGNLKSLFELDLSEN-QLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329 (1031)
Q Consensus 254 ~N~--l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 329 (1031)
+|. ++. .++..+.++++|++|+|++| .+. .+|..+..+++|+.|+++.+.. +++.|.+
T Consensus 193 ~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~-----------------~~~~~~~ 254 (594)
T 2p1m_B 193 CLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTA-----------------EVRPDVY 254 (594)
T ss_dssp TCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCC-----------------CCCHHHH
T ss_pred ccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccC-----------------ccchhhH
Confidence 665 110 01112234567777777766 333 3566666777777777654431 1122333
Q ss_pred CCCCcccccccccCceE-EcccCCCcCccCCccCcccccceEEccccccCCCcc-ccccCCCCCceEeccCcccCCc-Cc
Q 043316 330 DGVIPPSIGNLSSLRTL-YLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIP-HSIGNLTKLVLVNMCENHLFGL-IP 406 (1031)
Q Consensus 330 ~~~~p~~~~~l~~L~~L-~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~-~~ 406 (1031)
.+ ++..+.++++|+.| .+.+... +.++..+..+++|++|++++|.+++... ..+..+++|+.|++++| +... .+
T Consensus 255 ~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~ 331 (594)
T 2p1m_B 255 SG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLE 331 (594)
T ss_dssp HH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHH
T ss_pred HH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHH
Confidence 32 23345556666665 2322221 2233333455566666666666543221 22345566666666655 2211 11
Q ss_pred hhccCCccccceeccc---------cccccccccccC-CCCCCCeeccccccccCcccccccCCCccccccCcccccCCC
Q 043316 407 KSFRNLTSLERLRFNQ---------NNLFGKVYEAFG-DHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGS 476 (1031)
Q Consensus 407 ~~~~~l~~L~~L~L~~---------N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~ 476 (1031)
.....+++|++|++.+ +.++......+. .+++|+.|+++.|.++...
T Consensus 332 ~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~----------------------- 388 (594)
T 2p1m_B 332 VLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAA----------------------- 388 (594)
T ss_dssp HHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHH-----------------------
T ss_pred HHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHH-----------------------
Confidence 1122355555555522 233332222222 2455555555554444322
Q ss_pred CCCCcc-CCCCCcEEEee--C----CcccCC-----ChhhhhccccCceeecccccccCCCcccccc-cCccceeecCcC
Q 043316 477 IPPEIG-DSSKLQVLDLS--S----NHIVGK-----IPVQFEKLFSLNKLILNLNQLSGGVPLEFGS-LTELQYLDLSAN 543 (1031)
Q Consensus 477 ~p~~~~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N 543 (1031)
+..+. .+++|+.|+++ + |.+++. ++..+..+++|+.|++++ .+++..+..+.. +++|++|+|++|
T Consensus 389 -~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~ 466 (594)
T 2p1m_B 389 -LITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFA 466 (594)
T ss_dssp -HHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred -HHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCC
Confidence 12222 24556666665 3 344321 112245566777777765 555444444444 677888888888
Q ss_pred cCCCCCcccc-cCCCccceecccCcccCCCCch-hhccccccCceeccCcccCCcCCccc-cCcccchhhhcCCCc
Q 043316 544 KLSSSIPKSM-GNLSKLHYLNLSNNQFNHKIPT-EFEKLIHLSELDLSHNFLQGEIPPQI-CNMESLEELNLSHNN 616 (1031)
Q Consensus 544 ~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~ 616 (1031)
.+++..+..+ ..+++|++|+|++|.+++.... ....+++|+.|++++|+++......+ ..+++|+...+..+.
T Consensus 467 ~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 467 GDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp CSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 7765444444 5577888888888887544333 34557788888888888754333333 345666655555554
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=2.4e-29 Score=306.00 Aligned_cols=439 Identities=12% Similarity=0.080 Sum_probs=243.9
Q ss_pred ceeeccCcccCCCCCCcccccccccEEEeccccccc---ccCcc------------cccccccccccccccccccccCcc
Q 043316 176 NVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG---SIPNV------------MGNLNSLSILDLSQNQLRGSIPFS 240 (1031)
Q Consensus 176 ~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~---~~p~~------------~~~l~~L~~L~L~~N~l~~~~p~~ 240 (1031)
+.++++.+... ..+..+.++++|++|++++|.... ..|.. ...+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 35566554322 222345678899999999876322 12221 234566777777777766655555
Q ss_pred cc-ccCcccEEEeecC-cCCCC-CCccccccccccccccccccccccCCcccc----cCCCCCeeeeccCccCCCCC-CC
Q 043316 241 LA-NLSNLGILYLYKN-SLFGF-IPSVIGNLKSLFELDLSENQLFGSIPLSFS----NLSSLTLMSLFNNSLSGSIP-PT 312 (1031)
Q Consensus 241 l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~~L~L~~N~l~~~~p-~~ 312 (1031)
+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+.|++++|. . .+. ..
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~-~~~~~~ 202 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-S-EVSFSA 202 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-S-CCCHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-C-cCCHHH
Confidence 54 5667777777766 33321 333344566777777777766554333332 44566666666664 1 111 11
Q ss_pred CCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCccCcccccceEEcccc-------ccCCCccccc
Q 043316 313 QGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRN-------HLSGVIPHSI 385 (1031)
Q Consensus 313 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-------~l~~~~p~~~ 385 (1031)
+ +..+..+++|++|++++|...+.+|..+..+++|++|+++.+ .+.+ ++..+
T Consensus 203 l--------------------~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l 261 (594)
T 2p1m_B 203 L--------------------ERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVAL 261 (594)
T ss_dssp H--------------------HHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHH
T ss_pred H--------------------HHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHH
Confidence 1 111223455555555555211123444445555555553322 2222 22345
Q ss_pred cCCCCCceE-eccCcccCCcCchhccCCccccceecccccccccccc-ccCCCCCCCeeccccccccCcccc-cccCCCc
Q 043316 386 GNLTKLVLV-NMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYE-AFGDHPNLTFLDLSQNNLYGEISF-NWRNFPK 462 (1031)
Q Consensus 386 ~~l~~L~~L-~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~~ 462 (1031)
.++++|+.+ .+.+... ...+..+..+++|++|++++|.+...... .+..+++|+.|++++| +...... ....+++
T Consensus 262 ~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred hcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 555555555 2222211 12233333455566666665554433222 2345556666666655 3211111 1123455
Q ss_pred cccccCc---------ccccCCCCCCCcc-CCCCCcEEEeeCCcccCCChhhhh-ccccCceeecc--c----ccccCC-
Q 043316 463 LGTFNAS---------MNNIYGSIPPEIG-DSSKLQVLDLSSNHIVGKIPVQFE-KLFSLNKLILN--L----NQLSGG- 524 (1031)
Q Consensus 463 L~~L~l~---------~N~i~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~~- 524 (1031)
|++|+++ .+.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.+++.
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 5555552 2333322222222 367889998888888766666665 57889999998 4 556522
Q ss_pred ----CcccccccCccceeecCcCcCCCCCcccccC-CCccceecccCcccCCCCchhh-ccccccCceeccCcccCCcCC
Q 043316 525 ----VPLEFGSLTELQYLDLSANKLSSSIPKSMGN-LSKLHYLNLSNNQFNHKIPTEF-EKLIHLSELDLSHNFLQGEIP 598 (1031)
Q Consensus 525 ----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p 598 (1031)
++..+..+++|++|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 122356778899999977 666555555554 7889999999998876555554 668889999999998865443
Q ss_pred c-cccCcccchhhhcCCCccCCCCcccc-ccCCcceEEecccccc
Q 043316 599 P-QICNMESLEELNLSHNNLFDLIPGCF-EEMRSLSRIDIAYNEL 641 (1031)
Q Consensus 599 ~-~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~l~~N~l 641 (1031)
. .+..+++|+.|++++|+++......+ ..++.|+...+..+.-
T Consensus 499 ~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 499 LANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 3 34457888899999988854333334 4567777766665543
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=3.7e-26 Score=248.04 Aligned_cols=231 Identities=26% Similarity=0.308 Sum_probs=186.8
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
+..+..+++..+.+...+ .+..+++|++|++++|.++ .++ .++.+++|++|++++|.+++ + ..++.+++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCccccccc--ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEE
Confidence 445666777777766443 3667888888888888887 333 57888888888888888875 3 4788888889999
Q ss_pred ccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCC
Q 043316 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 180 L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
|++|.+++..|..++++++|++|++++|++++..|..|+++++|++|+|++|++++..|..++.+++|+.|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 99988887666778888899999999998887767778888889999999998887666677888899999999999888
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccc
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGN 339 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 339 (1031)
..+..+.++++|++|+|++|++++..|..|..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.+++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 8777788889999999999999887777788889999999999988754 456888888888888888888877
Q ss_pred cccC
Q 043316 340 LSSL 343 (1031)
Q Consensus 340 l~~L 343 (1031)
++..
T Consensus 245 ~~~~ 248 (272)
T 3rfs_A 245 VAPD 248 (272)
T ss_dssp BCGG
T ss_pred cCCC
Confidence 6543
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.6e-25 Score=243.75 Aligned_cols=206 Identities=24% Similarity=0.228 Sum_probs=166.6
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
++|++|++++|++++..+..++++++|++|+|++|++++..+..++++++|++|++++|++++..|..++++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46889999999998766668888999999999999988666678888899999999999888777778888889999999
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc-ccCcccccccccccccccccccccccCccccccCccc----EEEeecC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG-SIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLG----ILYLYKN 255 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~N 255 (1031)
++|.+++..+..++++++|++|++++|++++ .+|..|+++++|++|+|++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 9988886666678888888888888888875 3688888888888888888888876667777777776 7888888
Q ss_pred cCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCC
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
.+++..+..+.. .+|++|+|++|++++..+..|.++++|+.|++++|.+++
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 887665555444 478888888888886655667778888888888888774
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.2e-25 Score=244.88 Aligned_cols=212 Identities=23% Similarity=0.214 Sum_probs=151.6
Q ss_pred CCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccc
Q 043316 116 NIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGN 195 (1031)
Q Consensus 116 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~ 195 (1031)
.+|..+. ++|++|+|++|++++..+..++++++|++|++++|++++..|..++++++|++|+|++|.+++..|..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4565543 57899999999998766668889999999999999888666667888888888888888888777778888
Q ss_pred cccccEEEecccccccccCcccccccccccccccccccccc-cCccccccCcccEEEeecCcCCCCCCcccccccccc--
Q 043316 196 LSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGS-IPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLF-- 272 (1031)
Q Consensus 196 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-- 272 (1031)
+++|++|++++|++++..+..++++++|++|+|++|++++. +|..++++++|++|+|++|++++..+..+..+++|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 88888888888888866666788888888888888888753 577788888888888888888777667777776666
Q ss_pred --ccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccC
Q 043316 273 --ELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLD 330 (1031)
Q Consensus 273 --~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 330 (1031)
+|++++|++++..+..+. ..+|+.|++++|++++..+..+.++++|+.|++++|++.
T Consensus 179 ~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp CEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred ceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 566666666644333332 235666666655555433333344444444444444443
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=8.6e-25 Score=239.09 Aligned_cols=204 Identities=25% Similarity=0.299 Sum_probs=169.0
Q ss_pred cccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccC
Q 043316 96 SFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLI 175 (1031)
Q Consensus 96 ~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 175 (1031)
.++++++++++++++|+++ .+|..+. +++++|+|++|.+++..|..+.++++|++|+|++|++++ +|.. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcC
Confidence 4677888999999999988 6777664 688999999999987778889999999999999999884 4443 788889
Q ss_pred ceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecC
Q 043316 176 NVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN 255 (1031)
Q Consensus 176 ~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 255 (1031)
++|+|++|+++ .+|..+.++++|++|++++|++++..|..|+++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999888 78888888889999999999888666677888888888888888888666667788888888888888
Q ss_pred cCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
++++..+..|.++++|++|+|++|+++ .+|..+..+.+|+.|+|++|.+.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 888777777788888888888888887 67777777778888888888775
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=4.6e-25 Score=239.39 Aligned_cols=211 Identities=27% Similarity=0.302 Sum_probs=177.2
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+..+++|+.|++++|.++ .++ .++.+++|++|+|++|.+++ + +.++++++|++|++++|.+++..|..++++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 456788889999998887 343 58888999999999998885 3 4788889999999999999866666788899999
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|++++..|..++++++|++|++++|++++..|..|+++++|++|+|++|++++..+..++.+++|++|+|++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 99999999987777778889999999999999987667778889999999999999987777778889999999999999
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhh
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEA 318 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 318 (1031)
+++..|..+.++++|++|+|++|.+.+. +++|+.|+++.|+++|.+|..++.+..
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 9988888888899999999999988754 457888899999999999988887654
No 330
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=3.4e-24 Score=232.30 Aligned_cols=183 Identities=27% Similarity=0.261 Sum_probs=122.1
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+++++|+|++|++++..+..++++++|++|+|++|+++...+..+.++++|++|++++|++++..+..+..+++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 45677777777776555556677777777777777776443444566777777777777776444445666777777777
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 260 (1031)
++|.+++..|..|+++++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 77777755556667777777777777777654445566777777777777777755555566677777777777777766
Q ss_pred CCccccccccccccccccccccc
Q 043316 261 IPSVIGNLKSLFELDLSENQLFG 283 (1031)
Q Consensus 261 ~p~~~~~l~~L~~L~Ls~N~l~~ 283 (1031)
.+..|..+++|+.|+|++|.+..
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCC
T ss_pred CHHHhccccCCCEEEecCCCeeC
Confidence 66666667777777777776653
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=4.7e-25 Score=244.30 Aligned_cols=202 Identities=20% Similarity=0.168 Sum_probs=111.5
Q ss_pred ccceEEEeeccccCCCCCccc--cCcccCceeeccCcccCCCCC----CcccccccccEEEecccccccccCcccccccc
Q 043316 149 TCLRMLYFDVNHLHGSIPLEI--GKLSLINVLTLCHNNFSGRIP----PSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNS 222 (1031)
Q Consensus 149 ~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~ip----~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 222 (1031)
++|++|++++|.+++.+|..+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 345555555555555555554 555555555555555554433 22334555555555555555444455555555
Q ss_pred cccccccccccccc--c--CccccccCcccEEEeecCcCCCCCC--c-cccccccccccccccccccccCCcccccC---
Q 043316 223 LSILDLSQNQLRGS--I--PFSLANLSNLGILYLYKNSLFGFIP--S-VIGNLKSLFELDLSENQLFGSIPLSFSNL--- 292 (1031)
Q Consensus 223 L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~L~~N~l~~~~p--~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--- 292 (1031)
|++|+|++|++.+. + +..++.+++|++|+|++|+++...+ . .+.++++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 55555555554431 1 1122455555555555555542211 1 23455666666666666665555555554
Q ss_pred CCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcC
Q 043316 293 SSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYG 355 (1031)
Q Consensus 293 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 355 (1031)
++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|+|++|.++.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 46666666666666 4555543 5667777777777653 32 5667788888888887753
No 332
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=9.5e-27 Score=261.43 Aligned_cols=266 Identities=18% Similarity=0.186 Sum_probs=196.4
Q ss_pred CCCccceeEeCCCCCEEEEEecCCccccccCCccccCC--CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCC
Q 043316 63 SPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSF--PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGV 140 (1031)
Q Consensus 63 ~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l--~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 140 (1031)
-|.+|.++.|+. ..+..++++++.+.+ ..+..+ ++++.|++++|.+.+..|. +..+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~-~~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASDE-SLWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTCS-TTSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcCc-hhheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 345899998863 456778888876652 335566 7889999999988876554 67788999999999888765
Q ss_pred -CCccccccccceEEEeeccccCCCCCccccCcccCceeeccCc-ccCCC-CCCcccccccccEEEeccc-ccccc-cCc
Q 043316 141 -IPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHN-NFSGR-IPPSLGNLSNLAYLYLNNN-SLFGS-IPN 215 (1031)
Q Consensus 141 -~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-ip~~~~~l~~L~~L~l~~n-~l~~~-~p~ 215 (1031)
+|..+..+++|++|+|++|.+++.+|..++.+++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 7888888889999999888888778888888888888888888 67652 6777888888888888888 88754 577
Q ss_pred cccccc-cccccccccc--ccc-cccCccccccCcccEEEeecCc-CCCCCCcccccccccccccccccc-ccccCCccc
Q 043316 216 VMGNLN-SLSILDLSQN--QLR-GSIPFSLANLSNLGILYLYKNS-LFGFIPSVIGNLKSLFELDLSENQ-LFGSIPLSF 289 (1031)
Q Consensus 216 ~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~ 289 (1031)
.+..++ +|++|+|++| .++ +.+|..+..+++|+.|++++|. +++..+..+.++++|++|++++|. +.......+
T Consensus 189 ~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l 268 (336)
T 2ast_B 189 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 268 (336)
T ss_dssp HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGG
T ss_pred HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHH
Confidence 778888 8888888888 444 4567777788888888888888 666667778888888888888885 222222257
Q ss_pred ccCCCCCeeeeccCccCCCCCCCCCCh-hhhhhhhccccccCCCCccccc
Q 043316 290 SNLSSLTLMSLFNNSLSGSIPPTQGNL-EALSELGLYINQLDGVIPPSIG 338 (1031)
Q Consensus 290 ~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~ 338 (1031)
.++++|+.|++++| ++ ...+..+ .+|+.|++++|++++..|..++
T Consensus 269 ~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 269 GEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred hcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 77888888888877 32 1233333 2355555666666665555544
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.6e-24 Score=230.45 Aligned_cols=189 Identities=26% Similarity=0.280 Sum_probs=91.7
Q ss_pred CCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCC
Q 043316 63 SPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIP 142 (1031)
Q Consensus 63 ~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p 142 (1031)
+||.|.|.+|....+ .++++ ++.++ .+|..+. +.|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~~~~--~l~~~-------------------------~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~ 52 (251)
T 3m19_A 3 TCETVTGCTCNEGKK--EVDCQ-------------------------GKSLD-SVPSGIP--ADTEKLDLQSTGLATLSD 52 (251)
T ss_dssp -CHHHHSSEEEGGGT--EEECT-------------------------TCCCS-SCCSCCC--TTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCCCe--EEecC-------------------------CCCcc-ccCCCCC--CCCCEEEccCCCcCccCH
Confidence 688999999953222 23444 44444 3444333 355555555555555444
Q ss_pred ccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccc
Q 043316 143 QEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNS 222 (1031)
Q Consensus 143 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 222 (1031)
..++++++|++|+|++|++++..|..+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++
T Consensus 53 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 132 (251)
T 3m19_A 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTK 132 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCc
Confidence 45555555555555555555444444455555555555555555433444455555555555555554333333444444
Q ss_pred cccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccc
Q 043316 223 LSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQL 281 (1031)
Q Consensus 223 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 281 (1031)
|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+
T Consensus 133 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 133 LKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred ccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCce
Confidence 44444444444433333344444444444444444443333344444444444444443
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.8e-24 Score=235.05 Aligned_cols=176 Identities=29% Similarity=0.252 Sum_probs=73.4
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
.+++|+|++|.+++..|..|.++++|++|+|++|.+++. |.. +.+++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 334444444444433333444444444444444444321 111 34444444444444444 344444444444444444
Q ss_pred cCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 333 (1031)
+|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+.++++|+.|+|++|+++ .+
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~i 187 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI 187 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-cc
Confidence 44444444444444444444444444444333334444444444444444444322223333333333333333333 23
Q ss_pred cccccccccCceEEcccCCC
Q 043316 334 PPSIGNLSSLRTLYLYDNGF 353 (1031)
Q Consensus 334 p~~~~~l~~L~~L~L~~N~l 353 (1031)
|..+..+++|+.|+|++|.+
T Consensus 188 p~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 188 PKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CTTTTTTCCCSEEECCSCCB
T ss_pred ChhhcccccCCeEEeCCCCc
Confidence 33333333444444444433
No 335
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=7.6e-25 Score=259.67 Aligned_cols=187 Identities=17% Similarity=0.206 Sum_probs=147.8
Q ss_pred CccceeecCCCccEEEEEeCCCcEEEEEEccchhhh----hhhhcHHHHHHHHHHHhcCCCCceeeeeeeEecCCeeEEE
Q 043316 762 GEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLF----DEMADQDEFLNEVLALTEIRHRNIIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 837 (1031)
...+.||+|+||.||+|.. .++.+++|+....... .+....+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999954 6788999986443221 1222356789999999999999999777777677788999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCC
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNP 917 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 917 (1031)
|||+++++|.++++. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999975 457999999999999999 9999999999999998 999999999998754
Q ss_pred CCCC-------ceeeccccCccccccccc--cCCCccccchhhhHHHHHHHhCCCCC
Q 043316 918 HSSN-------WTAFAGTFGYAAPEIAHM--MRATEKYDVHSFGVLALEVIKGNHPR 965 (1031)
Q Consensus 918 ~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltG~~P~ 965 (1031)
.... .....||+.|||||++.+ ..|+..+|+|+..+-..+.+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3211 135679999999999987 56788899999999888888777664
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=5.6e-26 Score=257.57 Aligned_cols=254 Identities=19% Similarity=0.140 Sum_probs=155.8
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCC----ccccccc-cceEEEeeccccCCCCCccccCc-----cc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIP----QEIGHLT-CLRMLYFDVNHLHGSIPLEIGKL-----SL 174 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p----~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l-----~~ 174 (1031)
++++++|+++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|++++..+..++.+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35666777776666666666667777777777765544 5556666 67777777777766656666654 67
Q ss_pred CceeeccCcccCCCCCCccccc-----ccccEEEecccccccccCccccc-----ccccccccccccccccc----cCcc
Q 043316 175 INVLTLCHNNFSGRIPPSLGNL-----SNLAYLYLNNNSLFGSIPNVMGN-----LNSLSILDLSQNQLRGS----IPFS 240 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~p~~ 240 (1031)
|++|+|++|.+++..+..++.. ++|++|+|++|++++..+..++. .++|++|+|++|++++. ++..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 7777777777766555544433 67777777777776554444332 24677777777777643 2333
Q ss_pred ccccC-cccEEEeecCcCCCCCCcccccc-----cccccccccccccccc----CCccccc-CCCCCeeeeccCccCCCC
Q 043316 241 LANLS-NLGILYLYKNSLFGFIPSVIGNL-----KSLFELDLSENQLFGS----IPLSFSN-LSSLTLMSLFNNSLSGSI 309 (1031)
Q Consensus 241 l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~ 309 (1031)
+..++ +|++|+|++|++++..+..+... ++|++|+|++|++++. ++..+.. .++|++|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34444 77777777777766555444433 4777777777777642 3444544 347777777777776543
Q ss_pred C----CCCCChhhhhhhhccccccCCCC-------cccccccccCceEEcccCCCcCccC
Q 043316 310 P----PTQGNLEALSELGLYINQLDGVI-------PPSIGNLSSLRTLYLYDNGFYGLVP 358 (1031)
Q Consensus 310 p----~~~~~l~~L~~L~L~~N~l~~~~-------p~~~~~l~~L~~L~L~~N~l~~~~p 358 (1031)
+ ..+..+++|+.|++++|.+.+.. +..+..+++|+.|++++|.+....+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3 23455566666666666644322 2345566667777777777655433
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=1.1e-26 Score=266.10 Aligned_cols=246 Identities=20% Similarity=0.215 Sum_probs=162.4
Q ss_pred CCccccccCCcCcEeeCCCCcccCCC----CccccccccceEEEeecc---ccCCCCCccc-------cCcccCceeecc
Q 043316 116 NIPPQISNLSKLRALDLGNNQLSGVI----PQEIGHLTCLRMLYFDVN---HLHGSIPLEI-------GKLSLINVLTLC 181 (1031)
Q Consensus 116 ~~p~~~~~l~~L~~L~l~~n~l~~~~----p~~~~~l~~L~~L~l~~n---~l~~~~p~~~-------~~l~~L~~L~L~ 181 (1031)
.++..+..+++|++|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 56667777777888888887777553 334667777788877774 4555666555 677888888888
Q ss_pred CcccCC----CCCCcccccccccEEEecccccccccCcccc----cc---------cccccccccccccc-cccC---cc
Q 043316 182 HNNFSG----RIPPSLGNLSNLAYLYLNNNSLFGSIPNVMG----NL---------NSLSILDLSQNQLR-GSIP---FS 240 (1031)
Q Consensus 182 ~n~l~~----~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~ 240 (1031)
+|.+++ .+|..+.++++|++|+|++|.+++..+..++ .+ ++|++|+|++|+++ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888876 4677778888888888888887644333333 33 67777777777776 3444 35
Q ss_pred ccccCcccEEEeecCcCC--C---CCCcccccccccccccccccccc----ccCCcccccCCCCCeeeeccCccCCCCCC
Q 043316 241 LANLSNLGILYLYKNSLF--G---FIPSVIGNLKSLFELDLSENQLF----GSIPLSFSNLSSLTLMSLFNNSLSGSIPP 311 (1031)
Q Consensus 241 l~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 311 (1031)
+..+++|++|+|++|+++ | ..|..+.++++|++|+|++|+++ +.+|..+..+++|+.|+|++|.+++....
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 666777777777777776 2 33446667777777777777775 45666667777777777777766532000
Q ss_pred CCCChhhhhhhhccccccCCCCcccc--cccccCceEEcccCCCcC----ccCCcc-CcccccceEEccccccCCCc
Q 043316 312 TQGNLEALSELGLYINQLDGVIPPSI--GNLSSLRTLYLYDNGFYG----LVPNEI-GYLKSLSKLELCRNHLSGVI 381 (1031)
Q Consensus 312 ~~~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~~ 381 (1031)
.+|..+ +.+++|++|+|++|.+++ .+|..+ .++++|++|++++|++++..
T Consensus 263 --------------------~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 263 --------------------AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp --------------------HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred --------------------HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 123344 236667777777777765 355555 45677777777777776555
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5.1e-24 Score=235.97 Aligned_cols=226 Identities=18% Similarity=0.156 Sum_probs=190.5
Q ss_pred CCcccEEecCCCcCcCC-Ccc--ccccCCcCcEeeCCCCcccCCCCccc--cccccceEEEeeccccCCCCC----cccc
Q 043316 100 FPHLMYLNLSCNVLYGN-IPP--QISNLSKLRALDLGNNQLSGVIPQEI--GHLTCLRMLYFDVNHLHGSIP----LEIG 170 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~-~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~l~~n~l~~~~p----~~~~ 170 (1031)
...++.|.++++.++.. +.. ....+++|++|+|++|.+++.+|..+ +.+++|++|+|++|.+++..| ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 34578888888877532 111 13345779999999999999999998 999999999999999998766 4567
Q ss_pred CcccCceeeccCcccCCCCCCcccccccccEEEecccccccc--c--CcccccccccccccccccccccccCc----ccc
Q 043316 171 KLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGS--I--PNVMGNLNSLSILDLSQNQLRGSIPF----SLA 242 (1031)
Q Consensus 171 ~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~ 242 (1031)
.+++|++|+|++|.+++..|..++++++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .+|. .++
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 899999999999999988889999999999999999998753 3 233578999999999999997 3443 257
Q ss_pred ccCcccEEEeecCcCCCCCCcccccc---ccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhh
Q 043316 243 NLSNLGILYLYKNSLFGFIPSVIGNL---KSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEAL 319 (1031)
Q Consensus 243 ~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 319 (1031)
.+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L 296 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEV 296 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCc
Confidence 88999999999999999888888877 69999999999999 6787775 8999999999999964 43 6788999
Q ss_pred hhhhccccccCC
Q 043316 320 SELGLYINQLDG 331 (1031)
Q Consensus 320 ~~L~L~~N~l~~ 331 (1031)
+.|++++|+++.
T Consensus 297 ~~L~L~~N~l~~ 308 (310)
T 4glp_A 297 DNLTLDGNPFLV 308 (310)
T ss_dssp SCEECSSTTTSC
T ss_pred cEEECcCCCCCC
Confidence 999999999974
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=2.3e-25 Score=250.13 Aligned_cols=255 Identities=20% Similarity=0.234 Sum_probs=164.7
Q ss_pred cccEEecCCCcCcCCCccccccC--CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCC-CCccccCcccCcee
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNL--SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGS-IPLEIGKLSLINVL 178 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l--~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L 178 (1031)
.++.+++++|.+. |..+..+ +++++|++++|.+++..|. +.++++|++|++++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3677788777765 5556666 7777888887777765444 55677777777777777654 66667777777777
Q ss_pred eccCcccCCCCCCcccccccccEEEeccc-cccc-ccCccccccccccccccccc-ccccc-cCccccccC-cccEEEee
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNN-SLFG-SIPNVMGNLNSLSILDLSQN-QLRGS-IPFSLANLS-NLGILYLY 253 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n-~l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~L~ 253 (1031)
+|++|.+++.+|..++++++|++|++++| .+++ .+|..+.++++|++|+|++| ++++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 77777777666667777777777777777 5654 25555666777777777777 66643 455566666 66777766
Q ss_pred cC--cCC-CCCCcccccccccccccccccc-ccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhcccccc
Q 043316 254 KN--SLF-GFIPSVIGNLKSLFELDLSENQ-LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQL 329 (1031)
Q Consensus 254 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 329 (1031)
+| .++ +.+|..+.++++|++|++++|. +++..+..+.++++|+.|++++|. +..+
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~------------------- 262 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIP------------------- 262 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCG-------------------
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCH-------------------
Confidence 66 333 3344555566666666666666 554555555666666666666553 1111
Q ss_pred CCCCcccccccccCceEEcccCCCcCccCCccCccc-ccceEEccccccCCCccccccC
Q 043316 330 DGVIPPSIGNLSSLRTLYLYDNGFYGLVPNEIGYLK-SLSKLELCRNHLSGVIPHSIGN 387 (1031)
Q Consensus 330 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~ 387 (1031)
.....++++++|++|++++| ++ ...+..+. +|..|++++|++++..|..++.
T Consensus 263 --~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 263 --ETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp --GGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred --HHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 11124666788888888887 32 22344443 4777778888888887777665
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=2.1e-23 Score=221.80 Aligned_cols=131 Identities=20% Similarity=0.277 Sum_probs=61.0
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccc-cccccCcccccccccccccccc-cccccccCccccccCcccEEE
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNS-LFGSIPNVMGNLNSLSILDLSQ-NQLRGSIPFSLANLSNLGILY 251 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~ 251 (1031)
+|++|+|++|++++..+..|+++++|++|++++|+ +++..+..|+++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 44444455554443333344455555555555553 4433333444455555555554 444433334444445555555
Q ss_pred eecCcCCCCCCcccccccccc---ccccccc-cccccCCcccccCCCCC-eeeeccCccC
Q 043316 252 LYKNSLFGFIPSVIGNLKSLF---ELDLSEN-QLFGSIPLSFSNLSSLT-LMSLFNNSLS 306 (1031)
Q Consensus 252 L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~ 306 (1031)
+++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 55555444 232 44444444 5555555 44433333444445555 5555544444
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=7.3e-26 Score=259.26 Aligned_cols=256 Identities=16% Similarity=0.153 Sum_probs=152.6
Q ss_pred CcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCC----ccccCcccCceeeccCc---ccCCCCCCcc------
Q 043316 127 LRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIP----LEIGKLSLINVLTLCHN---NFSGRIPPSL------ 193 (1031)
Q Consensus 127 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~L~~n---~l~~~ip~~~------ 193 (1031)
|+...++...+. .++..+..+++|++|+|++|++++..+ ..+..+++|++|+|++| ++++.+|..+
T Consensus 11 L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~ 89 (386)
T 2ca6_A 11 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQA 89 (386)
T ss_dssp CEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHH
T ss_pred cccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHH
Confidence 333344444444 466677777788888888887775433 34567777777777774 4445555544
Q ss_pred -cccccccEEEeccccccc----ccCcccccccccccccccccccccccCcccc----cc---------CcccEEEeecC
Q 043316 194 -GNLSNLAYLYLNNNSLFG----SIPNVMGNLNSLSILDLSQNQLRGSIPFSLA----NL---------SNLGILYLYKN 255 (1031)
Q Consensus 194 -~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~L~~N 255 (1031)
.++++|++|+|++|.+++ .+|..+..+++|++|+|++|++++..+..++ .+ ++|++|+|++|
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n 169 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 169 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCC
Confidence 456666666666666665 3555666666666666666666533332222 22 44555555555
Q ss_pred cCCCCCCccccccccccccccccccccccCC---cccccCCCCCeeeeccCccCC-----CCCCCCCChhhhhhhhcccc
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQLFGSIP---LSFSNLSSLTLMSLFNNSLSG-----SIPPTQGNLEALSELGLYIN 327 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~L~~N 327 (1031)
+++. +.+| ..+..+++|+.|++++|+++. ..|..+..+++|+.|+|++|
T Consensus 170 ~l~~-----------------------~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n 226 (386)
T 2ca6_A 170 RLEN-----------------------GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDN 226 (386)
T ss_dssp CCTG-----------------------GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSS
T ss_pred CCCc-----------------------HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCC
Confidence 4441 2222 233444455555555554441 12223444444444444455
Q ss_pred ccC----CCCcccccccccCceEEcccCCCcCc----cCCcc--CcccccceEEccccccCC----Cccccc-cCCCCCc
Q 043316 328 QLD----GVIPPSIGNLSSLRTLYLYDNGFYGL----VPNEI--GYLKSLSKLELCRNHLSG----VIPHSI-GNLTKLV 392 (1031)
Q Consensus 328 ~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~ 392 (1031)
.++ +.+|..+..+++|++|+|++|.+++. +|..+ +.+++|++|+|++|.+++ .+|..+ .++++|+
T Consensus 227 ~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~ 306 (386)
T 2ca6_A 227 TFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 306 (386)
T ss_dssp CCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCC
T ss_pred CCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCce
Confidence 443 35566777788888888888888765 44555 337888888888888876 366666 5678888
Q ss_pred eEeccCcccCCcCc
Q 043316 393 LVNMCENHLFGLIP 406 (1031)
Q Consensus 393 ~L~l~~N~l~~~~~ 406 (1031)
+|++++|++++..+
T Consensus 307 ~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 307 FLELNGNRFSEEDD 320 (386)
T ss_dssp EEECTTSBSCTTSH
T ss_pred EEEccCCcCCcchh
Confidence 88888888877663
No 342
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=4.2e-24 Score=242.10 Aligned_cols=269 Identities=17% Similarity=0.175 Sum_probs=177.7
Q ss_pred hhccccccCCCCcccccccccCceEEcccCCCcCccC----CccCccc-ccceEEccccccCCCccccccCC-----CCC
Q 043316 322 LGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVP----NEIGYLK-SLSKLELCRNHLSGVIPHSIGNL-----TKL 391 (1031)
Q Consensus 322 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 391 (1031)
+.+++|.+++.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4567777777777766666668888888888776655 5566666 77778888777776666666654 777
Q ss_pred ceEeccCcccCCcCchhccC----C-ccccceecccccccccccccc----CC-CCCCCeeccccccccCcccccccCCC
Q 043316 392 VLVNMCENHLFGLIPKSFRN----L-TSLERLRFNQNNLFGKVYEAF----GD-HPNLTFLDLSQNNLYGEISFNWRNFP 461 (1031)
Q Consensus 392 ~~L~l~~N~l~~~~~~~~~~----l-~~L~~L~L~~N~l~~~~~~~~----~~-l~~L~~L~Ls~N~l~~~~~~~~~~~~ 461 (1031)
++|++++|++++..+..+.. + ++|++|++++|++.......+ .. .++|++|+|++|.++......
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~----- 157 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDE----- 157 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHH-----
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHH-----
Confidence 77777777777666654433 2 666777777666665555433 22 236666666666655322211
Q ss_pred ccccccCcccccCCCCCCCccCCC-CCcEEEeeCCcccCCChhhhhcc-----ccCceeecccccccCC----Ccccccc
Q 043316 462 KLGTFNASMNNIYGSIPPEIGDSS-KLQVLDLSSNHIVGKIPVQFEKL-----FSLNKLILNLNQLSGG----VPLEFGS 531 (1031)
Q Consensus 462 ~L~~L~l~~N~i~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~~~~~~~ 531 (1031)
++..+..++ +|++|+|++|+|++..+..+... ++|+.|+|++|++++. ++..+..
T Consensus 158 ---------------l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 158 ---------------LIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp ---------------HHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred ---------------HHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 112233343 78888888888887777655543 5888888888888853 3444544
Q ss_pred -cCccceeecCcCcCCCCCc----ccccCCCccceecccCcccCCCCch-------hhccccccCceeccCcccCCcCCc
Q 043316 532 -LTELQYLDLSANKLSSSIP----KSMGNLSKLHYLNLSNNQFNHKIPT-------EFEKLIHLSELDLSHNFLQGEIPP 599 (1031)
Q Consensus 532 -l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~~~-------~~~~l~~L~~L~Ls~N~l~~~~p~ 599 (1031)
.++|++|+|++|++++..+ ..+..+++|++|+|++|++.+..+. .+..+++|+.||+++|++.+..+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 3588888888888886544 3346678888888888886655433 566777888888888888766554
Q ss_pred cccCcccchhhhc
Q 043316 600 QICNMESLEELNL 612 (1031)
Q Consensus 600 ~~~~l~~L~~L~L 612 (1031)
.+. ..++.+.+
T Consensus 303 ~~~--~~l~~~~~ 313 (362)
T 3goz_A 303 PIS--NLIRELSG 313 (362)
T ss_dssp HHH--HHHHHHHT
T ss_pred HHH--HHHHHCCC
Confidence 443 23455443
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.1e-23 Score=220.40 Aligned_cols=188 Identities=20% Similarity=0.209 Sum_probs=124.3
Q ss_pred ccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccc-cccccCccccccCcccEEEeec-CcCCCCC
Q 043316 184 NFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQ-LRGSIPFSLANLSNLGILYLYK-NSLFGFI 261 (1031)
Q Consensus 184 ~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~ 261 (1031)
.++ .+|. +. .+|++|++++|++++..+..|+++++|++|++++|+ +++..+..|.++++|++|++++ |++++..
T Consensus 22 ~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~ 97 (239)
T 2xwt_C 22 DIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID 97 (239)
T ss_dssp SCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC
T ss_pred Ccc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC
Confidence 344 6776 44 488888898888886666678888888888888886 7755555788888888888887 8888777
Q ss_pred CccccccccccccccccccccccCCcccccCCCCC---eeeeccC-ccCCCCCCCCCChhhhh-hhhccccccCCCCccc
Q 043316 262 PSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLT---LMSLFNN-SLSGSIPPTQGNLEALS-ELGLYINQLDGVIPPS 336 (1031)
Q Consensus 262 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~ 336 (1031)
+..|.++++|++|++++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++ .+|..
T Consensus 98 ~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 98 PDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp TTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred HHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 7778888888888888888875 555 77777776 7777777 66654444555555555 5555555555 23332
Q ss_pred ccccccCceEEcccCC-CcCccCCccCcc-cccceEEccccccC
Q 043316 337 IGNLSSLRTLYLYDNG-FYGLVPNEIGYL-KSLSKLELCRNHLS 378 (1031)
Q Consensus 337 ~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~ 378 (1031)
....++|++|+|++|+ +++..+..|..+ ++|+.|++++|+++
T Consensus 175 ~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 175 AFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred hcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 2222455555555553 544444445555 55555555555554
No 344
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=1.2e-23 Score=248.96 Aligned_cols=213 Identities=25% Similarity=0.354 Sum_probs=116.7
Q ss_pred cCCCCCCCCCCCCCCCC-----cccee-EeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccc
Q 043316 49 LSSWTLYPANATKISPC-----TWFGI-FCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQIS 122 (1031)
Q Consensus 49 ~~sw~~~~~~~~~~~~C-----~w~gv-~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~ 122 (1031)
+.+|. .+.++| .|.|+ +|.. ++++.|+|+++++.+ +|+. + +++|++|+|++|.|+ .+| .
T Consensus 33 l~~W~------~~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~-~ip---~ 97 (571)
T 3cvr_A 33 WDKWE------KQALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALI-SLP---E 97 (571)
T ss_dssp HHHHH------TTCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCS-CCC---C
T ss_pred HHHHh------ccCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCc-ccc---c
Confidence 56675 355778 79999 7853 466667776666665 5543 2 255666666666665 455 3
Q ss_pred cCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 123 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
.+++|++|+|++|+|++ +|. +.+ +|++|+|++|++++ +|. .+++|++|+|++|.+++ +|. .+++|++|
T Consensus 98 ~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L 165 (571)
T 3cvr_A 98 LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVL 165 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEE
T ss_pred ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEE
Confidence 45666666666666664 555 444 56666666666654 554 45555555555555553 444 34555555
Q ss_pred EecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc
Q 043316 203 YLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282 (1031)
Q Consensus 203 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 282 (1031)
+|++|++++ +|. |+ ++|++|+|++|+|+ .+|. +.. +| +...+.|+.|+|++|+|+
T Consensus 166 ~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 166 SVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRENRIT 220 (571)
T ss_dssp ECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------------------------CCEEEECCSSCCC
T ss_pred ECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----------------hcccccceEEecCCCcce
Confidence 555555553 444 43 55555555555555 3443 332 33 000011155666666555
Q ss_pred ccCCcccccCCCCCeeeeccCccCCCCCCCCC
Q 043316 283 GSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQG 314 (1031)
Q Consensus 283 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 314 (1031)
.+|..+..+++|+.|+|++|.+++.+|..+.
T Consensus 221 -~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 221 -HIPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp -CCCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred -ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 4555555566666666666666555554443
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=7.7e-23 Score=225.88 Aligned_cols=193 Identities=27% Similarity=0.412 Sum_probs=108.6
Q ss_pred cCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCce
Q 043316 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINV 177 (1031)
Q Consensus 98 ~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 177 (1031)
..+++|++|++++|.++ .+| .+..+++|++|+|++|++++. |. ++++++|++|++++|++++ +| .++.+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCE
Confidence 34556666666666665 344 466666666666666666633 33 6666666666666666653 33 4566666666
Q ss_pred eeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcC
Q 043316 178 LTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSL 257 (1031)
Q Consensus 178 L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 257 (1031)
|+|++|++++ +|. +.++++|++|++++|++++..+ ++.+++|++|+|++|++++ ++. +..+++|+.|++++|++
T Consensus 112 L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCcc
Confidence 6666666653 333 5666666666666666653222 5555666666666666553 222 55555666666666655
Q ss_pred CCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 258 FGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 258 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|+++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred CcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 54332 555555555555555555332 2455555555555555554
No 346
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.8e-22 Score=214.70 Aligned_cols=180 Identities=25% Similarity=0.249 Sum_probs=130.3
Q ss_pred CcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEe
Q 043316 125 SKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYL 204 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l 204 (1031)
...++++++++.++ .+|..+. ++|+.|+|++|++++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 34677888888887 6676665 57777888888877666667777777777777777777666666777777777777
Q ss_pred cccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccccc
Q 043316 205 NNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 205 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
++|++++..+..|+++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 77777765566677777777777777777755555567777777777777777766666677777777777777777766
Q ss_pred CCcccccCCCCCeeeeccCccCC
Q 043316 285 IPLSFSNLSSLTLMSLFNNSLSG 307 (1031)
Q Consensus 285 ~p~~~~~l~~L~~L~L~~N~l~~ 307 (1031)
.+..|..+++|+.|+|++|.+++
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCT
T ss_pred CHHHHhCCCCCCEEEeeCCceeC
Confidence 56566777777777777777664
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1e-22 Score=224.82 Aligned_cols=211 Identities=22% Similarity=0.314 Sum_probs=127.2
Q ss_pred ccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
+..+.+..+.++..++ ..++++|++|++++|.++ .+| .+..+++|++|++++|++++ +|. ++.+++|++|+|++
T Consensus 21 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSG 94 (308)
T ss_dssp HHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCS
T ss_pred HHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccC
Confidence 3344455555554332 456777777777777776 345 56777777777777777763 444 67777777777777
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP 262 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 262 (1031)
|.+++ +| .++++++|++|++++|++++ +|. ++.+++|++|+|++|++++..+ ++.+++|+.|+|++|++++..+
T Consensus 95 n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 95 NPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp CCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh
Confidence 77663 33 46667777777777777664 332 6666666666666666664322 5566666666666666655332
Q ss_pred ccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc
Q 043316 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342 (1031)
Q Consensus 263 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 342 (1031)
+.++++|++|++++|++++..+ +..+++|+.|++++|+++ +.. .+..+++
T Consensus 169 --l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~------------------------~~~--~l~~l~~ 218 (308)
T 1h6u_A 169 --LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQIS------------------------DVS--PLANTSN 218 (308)
T ss_dssp --GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCC------------------------BCG--GGTTCTT
T ss_pred --hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccC------------------------ccc--cccCCCC
Confidence 5556666666666666653322 555555555555555554 322 1555666
Q ss_pred CceEEcccCCCcC
Q 043316 343 LRTLYLYDNGFYG 355 (1031)
Q Consensus 343 L~~L~L~~N~l~~ 355 (1031)
|++|+|++|.+++
T Consensus 219 L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 219 LFIVTLTNQTITN 231 (308)
T ss_dssp CCEEEEEEEEEEC
T ss_pred CCEEEccCCeeec
Confidence 6666666666654
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=3.7e-22 Score=207.18 Aligned_cols=184 Identities=24% Similarity=0.249 Sum_probs=99.7
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCcc
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQE 144 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 144 (1031)
|.|.+|.|+..+- . .+|. +-.++|++|++++|++++..+..+..+++|++|+|++|++++..+..
T Consensus 7 C~~~~v~c~~~~l-----------~-~~p~---~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (208)
T 2o6s_A 7 CSGTTVECYSQGR-----------T-SVPT---GIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGV 71 (208)
T ss_dssp EETTEEECCSSCC-----------S-SCCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred ECCCEEEecCCCc-----------c-CCCC---CCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhh
Confidence 7999999975321 1 1221 12345666677666666444444566666666666666666443444
Q ss_pred ccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccc
Q 043316 145 IGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLS 224 (1031)
Q Consensus 145 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 224 (1031)
++.+++|++|++++|++++..+..++.+++|++|+|++|+++ +..+..|+++++|+
T Consensus 72 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------------~~~~~~~~~l~~L~ 127 (208)
T 2o6s_A 72 FNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ------------------------SLPDGVFDKLTQLK 127 (208)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC------------------------CCCTTTTTTCTTCC
T ss_pred cCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCc------------------------ccCHhHhccCCcCC
Confidence 555555555555555555333333445555555555555554 33333344445555
Q ss_pred cccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccCCcccccCCC
Q 043316 225 ILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSS 294 (1031)
Q Consensus 225 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 294 (1031)
+|+|++|++++..+..+..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 128 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 128 DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred EEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 55555555543333334555555555555554432 2345666666666666666666665543
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=2.6e-22 Score=226.11 Aligned_cols=121 Identities=18% Similarity=0.186 Sum_probs=57.3
Q ss_pred eEEEeeccccCCCCCccccCcccCceeeccCcccCCCCC-CcccccccccEEEecccccccccCc-cccccccccc-ccc
Q 043316 152 RMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIP-PSLGNLSNLAYLYLNNNSLFGSIPN-VMGNLNSLSI-LDL 228 (1031)
Q Consensus 152 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip-~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~-L~L 228 (1031)
++++.++++++ .||..+. +++++|+|++|+++ .|| ..|++|++|++|+|++|++.+.+|. .|.++++|++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 34555566655 5555442 34555555555555 333 3455555555555555555444432 3444444432 333
Q ss_pred cccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccc
Q 043316 229 SQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDL 276 (1031)
Q Consensus 229 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 276 (1031)
+.|+++...|..|..+++|++|++++|++++..+..+....++..|++
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhh
Confidence 444444433444444444444444444444443333333344444444
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=6e-22 Score=223.16 Aligned_cols=204 Identities=17% Similarity=0.136 Sum_probs=120.4
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCc-cccCcccCceeeccCcccCCCCCC-ccccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPL-EIGKLSLINVLTLCHNNFSGRIPP-SLGNLSN 198 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~ip~-~~~~l~~ 198 (1031)
+..+.. ++++.++++++ .+|..+ .+++++|+|++|+++ .||. .|.++++|++|+|++|++.+.+|. .|.++++
T Consensus 6 ~C~C~~-~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 6 ICHCSN-RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp SSEEET-TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred ccEeeC-CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 444433 56677777777 667655 356777777777777 4554 567777777777777777655653 5667776
Q ss_pred ccE-EEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeec-CcCCCCCCccccccc-cccccc
Q 043316 199 LAY-LYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYK-NSLFGFIPSVIGNLK-SLFELD 275 (1031)
Q Consensus 199 L~~-L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~ 275 (1031)
|++ +.++.|++++..|..|.++++|++|++++|++++..+..+....++..|++.+ |+++...+..|..+. .++.|+
T Consensus 81 l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~ 160 (350)
T 4ay9_X 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILW 160 (350)
T ss_dssp CCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEE
T ss_pred hhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhc
Confidence 654 45556777765566777777777777777777755555566666677777754 455554455555543 456666
Q ss_pred cccccccccCCcccccCCCCCeeeecc-CccCCCCCCCCCChhhhhhhhccccccC
Q 043316 276 LSENQLFGSIPLSFSNLSSLTLMSLFN-NSLSGSIPPTQGNLEALSELGLYINQLD 330 (1031)
Q Consensus 276 Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 330 (1031)
|++|+++ .+|.......+|+.|++++ |.++...+..|.++++|++|++++|+|+
T Consensus 161 L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 161 LNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp CCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred ccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 6666665 3333333344555555543 3333222223344444444444444443
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.86 E-value=4.3e-23 Score=253.68 Aligned_cols=242 Identities=19% Similarity=0.165 Sum_probs=111.0
Q ss_pred cCCChHhHHHHHHHHHhCcCCCCCCCccCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCC
Q 043316 22 SSDSTKESYALLNWKTSLQNQNPNSSLLSSWTLYPANATKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFP 101 (1031)
Q Consensus 22 ~~~~~~~~~all~~k~~~~~~~~~~~~~~sw~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~ 101 (1031)
.+....++++|+++..+.. ...+..-.+|. .+.+.++.|.|++++. .+|+.++|.++++.+. + ..
T Consensus 127 ~s~~~~~~~~l~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~-~------~~ 191 (727)
T 4b8c_D 127 KSLVDCTKQALMEMADTLT--DSKTAKKQQPT-----GDSTPSGTATNSAVST-PLTPKIELFANGKDEA-N------QA 191 (727)
T ss_dssp -----CCCHHHHHHHHHHH--HHHTTC-----------------------------------------------------
T ss_pred hhccccchhhhhhhhhhcc--cccCcccCCCc-----CCCCccccCCCceecC-CccceEEeeCCCCCcc-h------hh
Confidence 3456778999999998875 11122334553 1344567999999865 7889998887776652 1 23
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
.++.++|+.|.+.+ ++++.|.+. ..|..+..+.+|+.|+|++|.++ .+|..++++++|++|+|+
T Consensus 192 ~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls 255 (727)
T 4b8c_D 192 LLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLN 255 (727)
T ss_dssp ---------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCT
T ss_pred HhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEee
Confidence 45566666666542 344455554 45666666777777777777766 666666677777777777
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCC
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFI 261 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 261 (1031)
+|.++ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.++ .+|..|++|++|+.|+|++|.+++.+
T Consensus 256 ~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 332 (727)
T 4b8c_D 256 GNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQF 332 (727)
T ss_dssp TSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHH
T ss_pred CCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCC
Confidence 77777 67777777777777777777776 66777777777777777777776 66767777777777777777777777
Q ss_pred Ccccccccc-ccccccccccccccCCcccccCCCCCeeeeccC
Q 043316 262 PSVIGNLKS-LFELDLSENQLFGSIPLSFSNLSSLTLMSLFNN 303 (1031)
Q Consensus 262 p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 303 (1031)
|..+..+.. +..|+|++|.+++.+|. .|+.|++++|
T Consensus 333 p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 333 LKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------
T ss_pred hHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecc
Confidence 766655432 23467778877777764 3445555555
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=6.3e-22 Score=234.27 Aligned_cols=189 Identities=26% Similarity=0.344 Sum_probs=118.2
Q ss_pred cCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEec
Q 043316 126 KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN 205 (1031)
Q Consensus 126 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~ 205 (1031)
+|++|+|++|++++ +|..+. ++|++|+|++|+++ .+| +.+++|++|+|++|++++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 44444444444443 444332 44555555555544 444 234555555555555553 554 443 55555555
Q ss_pred ccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccccccccC
Q 043316 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI 285 (1031)
Q Consensus 206 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 285 (1031)
+|++++ +|. .+++|++|+|++|++++ +|. .+++|+.|+|++|++++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 555554 444 45556666666666653 444 34566666666666665 444 44 66777777777776 55
Q ss_pred CcccccCCCC-------CeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCccccccccc
Q 043316 286 PLSFSNLSSL-------TLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSS 342 (1031)
Q Consensus 286 p~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 342 (1031)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..++.++.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 55 443 56 99999999999 68888888999999999999999999999887654
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=3.1e-21 Score=200.23 Aligned_cols=162 Identities=29% Similarity=0.331 Sum_probs=100.4
Q ss_pred cCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEee
Q 043316 174 LINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLY 253 (1031)
Q Consensus 174 ~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 253 (1031)
+|++|+|++|++++..+..++++++|++|++++|++++..+..|+++++|++|+|++|++++..+..+.++++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45555555555554333445555555555555555554434445556666666666666654444445666666666666
Q ss_pred cCcCCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCC
Q 043316 254 KNSLFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI 333 (1031)
Q Consensus 254 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 333 (1031)
+|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 666666555556666777777777777765555556677777777777776653 3456777888888888888
Q ss_pred ccccccccc
Q 043316 334 PPSIGNLSS 342 (1031)
Q Consensus 334 p~~~~~l~~ 342 (1031)
|.+++.++.
T Consensus 182 p~~~~~l~~ 190 (208)
T 2o6s_A 182 RNSAGSVAP 190 (208)
T ss_dssp BCTTSSBCT
T ss_pred eccCccccC
Confidence 877776654
No 354
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=8.7e-22 Score=213.76 Aligned_cols=156 Identities=18% Similarity=0.161 Sum_probs=122.5
Q ss_pred HHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhh-h-------------hcHHHHHHHHHHHhcCCC
Q 043316 753 EIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDE-M-------------ADQDEFLNEVLALTEIRH 818 (1031)
Q Consensus 753 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~-------------~~~~~~~~Ei~~l~~l~h 818 (1031)
.+......|.+.+.||+|+||.||+|...+|+.||||+++....... . .....+.+|+.++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 33444455677799999999999999777899999999865321110 0 13567899999999999
Q ss_pred CceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeee
Q 043316 819 RNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLL 898 (1031)
Q Consensus 819 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 898 (1031)
| +++.+++.. +..++||||+++++|.+ +.. .+...++.|++.|++|||+. ||+||||||+||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 4 666665544 56699999999999988 432 23457999999999999999 99999999999999
Q ss_pred CCCCceEEeccccccccCCCCCCceeeccccCccccccccc
Q 043316 899 DSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHM 939 (1031)
Q Consensus 899 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 939 (1031)
+ ++.+||+|||+|+.. ..|+|||++.+
T Consensus 227 ~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~r 253 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEV-------------GEEGWREILER 253 (282)
T ss_dssp E-TTEEEECCCTTCEET-------------TSTTHHHHHHH
T ss_pred E-CCcEEEEECCCCeEC-------------CCCCHHHHHHH
Confidence 9 999999999999743 34789998754
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=1.5e-22 Score=241.05 Aligned_cols=188 Identities=23% Similarity=0.248 Sum_probs=113.2
Q ss_pred cCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCc-------------ccCCCCccccccccceEEE-eeccccCC
Q 043316 98 SSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQ-------------LSGVIPQEIGHLTCLRMLY-FDVNHLHG 163 (1031)
Q Consensus 98 ~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~-------------l~~~~p~~~~~l~~L~~L~-l~~n~l~~ 163 (1031)
...++|+.|+|++|.++ .+|++|++|++|++|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56777888888888886 778888888888888887764 4556667777777777777 5555432
Q ss_pred CCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccc
Q 043316 164 SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLAN 243 (1031)
Q Consensus 164 ~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 243 (1031)
.|+.+.+++|.++ .+|. ..|+.|+|++|++++ +|. |+++++|++|+|++|+++ .+|..+++
T Consensus 424 ----------~L~~l~l~~n~i~-~l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVL-KMEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHH-HHHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhccccc-ccCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 2233333334433 1111 135556666665553 444 555566666666666655 55555666
Q ss_pred cCcccEEEeecCcCCCCCCccccccccccccccccccccccC-CcccccCCCCCeeeeccCccCCC
Q 043316 244 LSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLFGSI-PLSFSNLSSLTLMSLFNNSLSGS 308 (1031)
Q Consensus 244 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ 308 (1031)
+++|+.|+|++|++++ +| .++++++|++|+|++|++++.. |..|+.+++|+.|+|++|++++.
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 6666666666666655 34 5555666666666666665544 55566666666666666666543
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=7.2e-20 Score=192.67 Aligned_cols=159 Identities=23% Similarity=0.243 Sum_probs=94.5
Q ss_pred CCCCCCccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccC
Q 043316 60 TKISPCTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSG 139 (1031)
Q Consensus 60 ~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~ 139 (1031)
.+++.|+|.+|.|+..+ + +.+|.. -.++|++|+|++|.+++..|..+..+++|++|+|++|++++
T Consensus 14 ~~~~~Cs~~~v~c~~~~-l-----------~~ip~~---~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 78 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKR-H-----------ASVPAG---IPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA 78 (229)
T ss_dssp CTTCEEETTEEECTTSC-C-----------SSCCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCEEeCCEeEccCCC-c-----------CccCCC---CCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC
Confidence 46788999999996532 1 223322 12566777777777776666666677777777777777654
Q ss_pred CCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccc
Q 043316 140 VIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGN 219 (1031)
Q Consensus 140 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 219 (1031)
..+..+..+++|++|+|++|++++..|..++.+++|++|+|++|+++ .+|..+.++++|++|+|++|++++..+..|..
T Consensus 79 i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 157 (229)
T 3e6j_A 79 LPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR 157 (229)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred cChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhC
Confidence 43344566666666666666666433344555666666666666655 55555555555555555555555433344555
Q ss_pred ccccccccccccccc
Q 043316 220 LNSLSILDLSQNQLR 234 (1031)
Q Consensus 220 l~~L~~L~L~~N~l~ 234 (1031)
+++|++|+|++|.+.
T Consensus 158 l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWD 172 (229)
T ss_dssp CTTCCEEECTTSCBC
T ss_pred CCCCCEEEeeCCCcc
Confidence 555555555555544
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=1.2e-20 Score=226.17 Aligned_cols=200 Identities=24% Similarity=0.331 Sum_probs=140.7
Q ss_pred CCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 100 FPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
+..+..++++.+.+...++ +..|++|+.|+|++|.++ .+| .++.+++|+.|+|++|++++..| ++.+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445566677776664433 567777888888887776 344 57777788888888887774333 77777888888
Q ss_pred ccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCC
Q 043316 180 LCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFG 259 (1031)
Q Consensus 180 L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 259 (1031)
|++|.+++ +| .+.++++|++|+|++|++++ + +.++.+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 88887773 44 57777888888888887774 3 3477777788888888877753 567777788888888887777
Q ss_pred CCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCC
Q 043316 260 FIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGN 315 (1031)
Q Consensus 260 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 315 (1031)
..| +..+++|+.|+|++|++++. | .+..+++|+.|+|++|++++.....+..
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred chh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCCccccccc
Confidence 655 77777888888888877753 3 5777777777777777777544433333
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=9.7e-21 Score=207.08 Aligned_cols=188 Identities=24% Similarity=0.342 Sum_probs=104.2
Q ss_pred ccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 103 LMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
+..+++..+.+++..+ +..+++|++|++++|.++ .+| .++.+++|++|++++|++++ +|. ++++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCC
Confidence 3444455555543222 345566666666666665 233 35566666666666666653 333 56666666666666
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCC
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP 262 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 262 (1031)
|.+++ +| .++++++|++|++++|++++ + +.++.+++|++|++++|++++. ..+..+++|+.|+|++|++++..|
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 66653 33 25666666666666666653 2 3455566666666666666532 345556666666666666655433
Q ss_pred ccccccccccccccccccccccCCcccccCCCCCeeeeccCccC
Q 043316 263 SVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 263 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
+..+++|++|+|++|++++ +| .+..+++|+.|++++|+++
T Consensus 174 --l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred --hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 5555666666666666553 23 2555555666666555554
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=5e-20 Score=220.62 Aligned_cols=182 Identities=29% Similarity=0.411 Sum_probs=158.3
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+..+++|+.|++++|.+. .+| .+..+++|++|+|++|++++..| ++.+++|+.|+|++|++++ +| .++.+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 567889999999999997 455 59999999999999999996544 9999999999999999984 44 799999999
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|.+++ + +.+.+|++|+.|+|++|++++. ..++.+++|+.|+|++|++++..| +..+++|+.|+|++|.
T Consensus 113 ~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 99999999985 4 4699999999999999999864 678999999999999999997666 9999999999999999
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccC
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNL 292 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 292 (1031)
+++. ..+..+++|+.|+|++|++.+.....+..+
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSC
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcCCcccccccE
Confidence 9975 468999999999999999986433333333
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=6.2e-20 Score=200.69 Aligned_cols=173 Identities=28% Similarity=0.433 Sum_probs=151.8
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLIN 176 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 176 (1031)
+..+++|++|++++|.+.. +| .+..+++|++|+|++|++++..| ++++++|++|++++|++++ +| .++.+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 4568889999999999984 45 48999999999999999996544 9999999999999999985 44 499999999
Q ss_pred eeeccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCc
Q 043316 177 VLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNS 256 (1031)
Q Consensus 177 ~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 256 (1031)
+|+|++|++++ + +.+.++++|++|++++|++++. ..++.+++|++|+|++|++++..| +..+++|+.|+|++|.
T Consensus 116 ~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 99999999985 4 5689999999999999999854 678999999999999999996554 8999999999999999
Q ss_pred CCCCCCccccccccccccccccccccc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFG 283 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 283 (1031)
+++. | .+..+++|+.|++++|+++.
T Consensus 190 i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCC-h-hhccCCCCCEEECcCCcccC
Confidence 9875 3 48999999999999999985
No 361
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=4.5e-22 Score=237.03 Aligned_cols=149 Identities=23% Similarity=0.241 Sum_probs=79.6
Q ss_pred CCCCCCcccccccccEEE-ecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcc
Q 043316 186 SGRIPPSLGNLSNLAYLY-LNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSV 264 (1031)
Q Consensus 186 ~~~ip~~~~~l~~L~~L~-l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 264 (1031)
.+.+|..+++|++|+.|+ ++.|.+ .+|+.+.+++|.++. +|. ..|+.|+|++|.+++ +|.
T Consensus 398 ~~~~~~~l~~l~~L~~L~~l~~n~~-----------~~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~- 458 (567)
T 1dce_A 398 LLYEKETLQYFSTLKAVDPMRAAYL-----------DDLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH- 458 (567)
T ss_dssp GGGHHHHHHHHHHHHHHCGGGHHHH-----------HHHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-
T ss_pred ccCCHHHHHHHHhcccCcchhhccc-----------chhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-
Confidence 344555555555555555 444332 244455555555553 221 136666666666665 344
Q ss_pred ccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCC-cccccccccC
Q 043316 265 IGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVI-PPSIGNLSSL 343 (1031)
Q Consensus 265 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L 343 (1031)
|+++++|+.|+|++|+++ .+|..|+++++|+.|+|++|+|++ +| .++++++|+.|+|++|++++.. |..++.+++|
T Consensus 459 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L 535 (567)
T 1dce_A 459 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL 535 (567)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCC
Confidence 666666666666666666 556666666666666666666653 33 4444444444444444444443 4444444444
Q ss_pred ceEEcccCCCcCc
Q 043316 344 RTLYLYDNGFYGL 356 (1031)
Q Consensus 344 ~~L~L~~N~l~~~ 356 (1031)
+.|+|++|.+++.
T Consensus 536 ~~L~L~~N~l~~~ 548 (567)
T 1dce_A 536 VLLNLQGNSLCQE 548 (567)
T ss_dssp CEEECTTSGGGGS
T ss_pred CEEEecCCcCCCC
Confidence 4444444444443
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.9e-19 Score=188.11 Aligned_cols=156 Identities=22% Similarity=0.266 Sum_probs=124.5
Q ss_pred cEEEeeCCcccCCChhhhhccccCceeecccccccCCCc-ccccccCccceeecCcCcCCCCCcccccCCCccceecccC
Q 043316 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVP-LEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566 (1031)
Q Consensus 488 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 566 (1031)
+.+++++|.++. +|..+. ..++.|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 467777777763 444432 345677777777776544 4577888888888888888877777888888888888888
Q ss_pred cccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 567 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.|..|..+++|+.|++++|+|+|..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88888888888888888888888888888778888888888889999998888888888888999999999998887554
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=1.8e-19 Score=188.35 Aligned_cols=153 Identities=24% Similarity=0.341 Sum_probs=113.5
Q ss_pred cEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCc
Q 043316 488 QVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNN 567 (1031)
Q Consensus 488 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 567 (1031)
+.+++++|.++ .+|..+. ++|+.|++++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666665 3344332 46677777777777666667777777777777777777666777777777777777777
Q ss_pred ccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccC
Q 043316 568 QFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 568 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
+|+...+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++.+..|..+++|++|++++|+|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 7776666667777888888888888877777778888888888888888888777778888888888888888776
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=3.8e-19 Score=185.81 Aligned_cols=131 Identities=21% Similarity=0.236 Sum_probs=55.1
Q ss_pred ccEEecCCCcCcCCCcc-ccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 103 LMYLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 103 l~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
+++|+|++|++++..|. .+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 34455555554433232 24444444444444444443333344444444444444444443333334444444444444
Q ss_pred CcccCCCCCCcccccccccEEEecccccccccCccccccccccccccccccc
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQL 233 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 233 (1031)
+|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 4444433334444444444444444444433333333333333333333333
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=2e-19 Score=203.26 Aligned_cols=154 Identities=27% Similarity=0.260 Sum_probs=70.7
Q ss_pred CcEeeCCCCcccCCCCcccc-ccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEec
Q 043316 127 LRALDLGNNQLSGVIPQEIG-HLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLN 205 (1031)
Q Consensus 127 L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~ 205 (1031)
+++|+|++|++++..+..+. ++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44555555555433333343 44444444444444443333344444555555555555543333444555555555555
Q ss_pred ccccccccCcccccccccccccccccccccccCcc-c---cccCcccEEEeecCcCCCCCCcccccccc--ccccccccc
Q 043316 206 NNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFS-L---ANLSNLGILYLYKNSLFGFIPSVIGNLKS--LFELDLSEN 279 (1031)
Q Consensus 206 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-l---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N 279 (1031)
+|++++..|..|.++++|++|+|++|++++ +|.. + ..+++|+.|+|++|++++..+..+..++. |+.|+|++|
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 555554444445555555555555555542 2222 2 33445555555555554443334444443 244444444
Q ss_pred cc
Q 043316 280 QL 281 (1031)
Q Consensus 280 ~l 281 (1031)
.+
T Consensus 200 ~~ 201 (361)
T 2xot_A 200 PL 201 (361)
T ss_dssp CE
T ss_pred Cc
Confidence 43
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=2.1e-19 Score=203.17 Aligned_cols=176 Identities=26% Similarity=0.293 Sum_probs=129.0
Q ss_pred cEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCcccc-CcccCceeeccCcccCCCCCCcccccccccEEEecc
Q 043316 128 RALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIG-KLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNN 206 (1031)
Q Consensus 128 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~ 206 (1031)
+.+++++|+++ .+|..+. ..++.|+|++|++++..+..+. .+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777777777 5676554 3478888888888865555666 788888888888888866667788888888888888
Q ss_pred cccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCccc---cccccccccccccccccc
Q 043316 207 NSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVI---GNLKSLFELDLSENQLFG 283 (1031)
Q Consensus 207 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 283 (1031)
|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 88876666677888888888888888887667778888888888888888877555555 457777777777777775
Q ss_pred cCCcccccCCC--CCeeeeccCccC
Q 043316 284 SIPLSFSNLSS--LTLMSLFNNSLS 306 (1031)
Q Consensus 284 ~~p~~~~~l~~--L~~L~L~~N~l~ 306 (1031)
..+..|..++. |+.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 44456666665 366777777665
No 367
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=5e-19 Score=184.87 Aligned_cols=79 Identities=19% Similarity=0.286 Sum_probs=33.6
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 184 (1031)
.+++++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4455555554 3444332 344444444444443333344444444444444444443333333333444444444333
Q ss_pred cC
Q 043316 185 FS 186 (1031)
Q Consensus 185 l~ 186 (1031)
++
T Consensus 92 l~ 93 (220)
T 2v9t_B 92 IT 93 (220)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=9.8e-20 Score=195.84 Aligned_cols=171 Identities=21% Similarity=0.303 Sum_probs=121.5
Q ss_pred CCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 99 SFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
++.+++.+++++|.++ .++ .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++ +|. ++.+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEE
Confidence 4556777778888777 344 5777888888888888877 455 67778888888888888774 444 7778888888
Q ss_pred eccCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCC
Q 043316 179 TLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 179 ~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 258 (1031)
+|++|++++ +|.... ++|++|++++|++++ +| .++++++|++|+|++|++++ +| .+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCc
Confidence 888888773 554333 777788888777774 33 47777777777777777774 33 5677777777777777777
Q ss_pred CCCCcccccccccccccccccccccc
Q 043316 259 GFIPSVIGNLKSLFELDLSENQLFGS 284 (1031)
Q Consensus 259 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ 284 (1031)
+. ..+..+++|+.|++++|.+++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 65 5567777777777777777643
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=8.8e-19 Score=184.32 Aligned_cols=156 Identities=28% Similarity=0.345 Sum_probs=114.4
Q ss_pred CcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccC
Q 043316 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566 (1031)
Q Consensus 487 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 566 (1031)
-+.++.+++.+. .+|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666665 3443332 5677777777777766677777777777777777777755556677777777777777
Q ss_pred cccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 567 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++.+..|..+++|+.|++++|+++|..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 7777766777777788888888888887 667777788888888888888887777777788888888888888877544
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.3e-19 Score=222.84 Aligned_cols=164 Identities=26% Similarity=0.250 Sum_probs=59.5
Q ss_pred CcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 101 PHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
+.++.|+|++|.+.. +|. ..|+.++|+.|.+++ ++++.|.+. ..|..+..++.|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 445666666666653 222 224445555554442 233344443 34445555555555555
Q ss_pred cCcccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCC
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGF 260 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 260 (1031)
++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|++|.++ .
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 555555 55555555555555555555555 45555555555555555555555 44555555555555555555544 2
Q ss_pred CCccccccccccccccccccccccCCccc
Q 043316 261 IPSVIGNLKSLFELDLSENQLFGSIPLSF 289 (1031)
Q Consensus 261 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 289 (1031)
+|..|+++++|++|+|++|.+++.+|..+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 34444444444444444444444444433
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.5e-19 Score=194.47 Aligned_cols=171 Identities=26% Similarity=0.352 Sum_probs=132.0
Q ss_pred cCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 123 NLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 123 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
.+.++..+++++|.++ .++ .+..+++|++|++++|.++ .+| .++.+++|++|+|++|++++ +|+ ++++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEE
Confidence 5777888899999888 444 6788889999999999887 566 68888888888888888884 444 8888888888
Q ss_pred EecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCCcccccccccccccccccccc
Q 043316 203 YLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSENQLF 282 (1031)
Q Consensus 203 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 282 (1031)
+|++|++++ +|.... ++|++|+|++|++++ +| .+..+++|+.|+|++|++++. + .+..+++|++|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888874 554322 788888888888875 33 577788888888888888764 3 5777788888888888877
Q ss_pred ccCCcccccCCCCCeeeeccCccCCC
Q 043316 283 GSIPLSFSNLSSLTLMSLFNNSLSGS 308 (1031)
Q Consensus 283 ~~~p~~~~~l~~L~~L~L~~N~l~~~ 308 (1031)
+. ..+..+++|+.|++++|.+++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 55 5677777777777777777654
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=7.8e-19 Score=180.23 Aligned_cols=153 Identities=18% Similarity=0.232 Sum_probs=79.1
Q ss_pred cccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEecccccccccCccccccccccc
Q 043316 146 GHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSI 225 (1031)
Q Consensus 146 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 225 (1031)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+.++++|++|++++|++++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34444444444444444 344 3444555555555555332 2224555555555555555555445555555555555
Q ss_pred ccccccccccccCccccccCcccEEEeecCc-CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCc
Q 043316 226 LDLSQNQLRGSIPFSLANLSNLGILYLYKNS-LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNS 304 (1031)
Q Consensus 226 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 304 (1031)
|+|++|++++..|..++.+++|++|++++|. ++. +| .+.++++|++|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 5555555555455555555555555555555 332 33 45556666666666666553 22 45566666666666666
Q ss_pred cC
Q 043316 305 LS 306 (1031)
Q Consensus 305 l~ 306 (1031)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 54
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=1.8e-18 Score=177.51 Aligned_cols=155 Identities=20% Similarity=0.235 Sum_probs=125.2
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCccccccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLA 200 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~ 200 (1031)
.+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..++.+++|++|++++|.+++..|..++++++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 477888888888888888 667 6888888888888888664 345788888888888888888877888888888888
Q ss_pred EEEecccccccccCcccccccccccccccccc-cccccCccccccCcccEEEeecCcCCCCCCccccccccccccccccc
Q 043316 201 YLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQ-LRGSIPFSLANLSNLGILYLYKNSLFGFIPSVIGNLKSLFELDLSEN 279 (1031)
Q Consensus 201 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 279 (1031)
+|++++|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|++++|.+++. + .+..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 88888888887778888888888888888888 54 566 688888888888888888864 3 6788888888888888
Q ss_pred cccc
Q 043316 280 QLFG 283 (1031)
Q Consensus 280 ~l~~ 283 (1031)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 8763
No 374
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=9.1e-19 Score=195.39 Aligned_cols=218 Identities=12% Similarity=0.045 Sum_probs=142.3
Q ss_pred CccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccc----cCCCCCCCccCCCCC
Q 043316 412 LTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNN----IYGSIPPEIGDSSKL 487 (1031)
Q Consensus 412 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~----i~~~~p~~~~~l~~L 487 (1031)
+++|+.|+|.+ ++..+...+|..+++|+.|++++|.+..+...+|.+..++..+.+..+. ........|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 55555555555 5555555555555555555555555555555555555544444443321 122223345555666
Q ss_pred c-EEEeeCCcccCCChhhhh----ccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCcccee
Q 043316 488 Q-VLDLSSNHIVGKIPVQFE----KLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYL 562 (1031)
Q Consensus 488 ~-~L~Ls~N~l~~~~p~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 562 (1031)
+ .+++.... .++..+. ...++..+.+.++-...........+++|+.|+|++|+++.+.+.+|.++++|++|
T Consensus 179 ~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l 255 (329)
T 3sb4_A 179 ETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKI 255 (329)
T ss_dssp EEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEE
T ss_pred ceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEE
Confidence 6 45554332 2222221 24556666665542221111111237889999999988887777789999999999
Q ss_pred cccCcccCCCCchhhccccccC-ceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEe
Q 043316 563 NLSNNQFNHKIPTEFEKLIHLS-ELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRID 635 (1031)
Q Consensus 563 ~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 635 (1031)
+|++| ++.+.+.+|.++.+|+ .+++.+ .++...+..|.++++|+.|++++|.++.+.+.+|..+++|+.++
T Consensus 256 ~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 256 KLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred ECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 99988 8777888899999999 999988 77766678899999999999999999999888999999998876
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.4e-18 Score=193.81 Aligned_cols=259 Identities=14% Similarity=0.099 Sum_probs=131.9
Q ss_pred ccccccccccccccc--cccCccccccCcccEEEeecCcCCCCCCccccc--------cccccccccccccccccCCccc
Q 043316 220 LNSLSILDLSQNQLR--GSIPFSLANLSNLGILYLYKNSLFGFIPSVIGN--------LKSLFELDLSENQLFGSIPLSF 289 (1031)
Q Consensus 220 l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~ 289 (1031)
+++|++|||++|+++ ...+..+ +.+..+.+..|.+ .+..|.+ +++|+.|+|.+ .++...+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 455566666666555 1111111 2233444444422 2334555 67777777766 6664445566
Q ss_pred ccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccc----cCCCCcccccccccCc-eEEcccCCCcCccCCcc---
Q 043316 290 SNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQ----LDGVIPPSIGNLSSLR-TLYLYDNGFYGLVPNEI--- 361 (1031)
Q Consensus 290 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~--- 361 (1031)
.+|++|+.|++.+|.++...+.+|.++.++..+.+..+. ....-...|.++..|+ .+.+.... .++..+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~ 197 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKA 197 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHT
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHhhc
Confidence 677777777777776665555566665555555444321 1222233455555555 34433221 111111
Q ss_pred -CcccccceEEccccccCCCccccc-cCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCC
Q 043316 362 -GYLKSLSKLELCRNHLSGVIPHSI-GNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNL 439 (1031)
Q Consensus 362 -~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 439 (1031)
-...+++.+.+.++-.. .....+ ..+++|+.+++++|+++.+.+.+|.++.+|+++++.+| +..+...+|..+++|
T Consensus 198 ~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L 275 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRL 275 (329)
T ss_dssp TCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhc
Confidence 12334455555443211 111111 12455555555555555555555555555555555554 555555555555555
Q ss_pred C-eeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceee
Q 043316 440 T-FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLI 515 (1031)
Q Consensus 440 ~-~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 515 (1031)
+ .+++.+ .++ ...+.+|.++++|+.|++++|.++.+.+.+|.++++|+.++
T Consensus 276 ~~~l~l~~-~l~------------------------~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 276 AGTLELPA-SVT------------------------AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CEEEEECT-TCC------------------------EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cEEEEEcc-cce------------------------EEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 5 555544 333 33445666666777777777777666666777777777665
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=1.3e-17 Score=178.81 Aligned_cols=141 Identities=17% Similarity=0.175 Sum_probs=107.5
Q ss_pred ccCccceeecCCCccEEEEEe-CCCcE--EEEEEccchhhh-h-------------------hhhcHHHHHHHHHHHhcC
Q 043316 760 DFGEKYCIGKGRQGSVYKAEL-PSGII--FAVKKFNSQLLF-D-------------------EMADQDEFLNEVLALTEI 816 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~-~-------------------~~~~~~~~~~Ei~~l~~l 816 (1031)
-|.+.+.||+|+||.||+|.. .+|+. ||||+++..... . .......+.+|+.++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367788999999999999976 68988 999987543211 0 001124678999999999
Q ss_pred CCCce--eeeeeeEecCCeeEEEEEeccC-C----CchhhcccCCccccCCHHHHHHHHHHHHHHHHHhh-hCCCCCeee
Q 043316 817 RHRNI--IKFHGFCSNAQHSFIVSEYLDR-G----SLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH-HDCLPPIVH 888 (1031)
Q Consensus 817 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH 888 (1031)
+|+++ +..+++ +..++||||+.+ | +|.++... .++.++..++.|++.|++||| +. ||+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 88754 344432 356899999942 4 55554332 234567889999999999999 88 9999
Q ss_pred CCCCCCCeeeCCCCceEEecccccccc
Q 043316 889 GDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 889 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
|||||+||+++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999988 9999999999865
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=1.9e-17 Score=168.98 Aligned_cols=110 Identities=25% Similarity=0.269 Sum_probs=56.3
Q ss_pred cccEEecCCCcCcCCCcc-ccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeec
Q 043316 102 HLMYLNLSCNVLYGNIPP-QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTL 180 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 180 (1031)
++++|++++|.+++..|. .++.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 455555555555533332 2455555555555555555444555555555555555555555444444555555555555
Q ss_pred cCcccCCCCCCcccccccccEEEeccccccc
Q 043316 181 CHNNFSGRIPPSLGNLSNLAYLYLNNNSLFG 211 (1031)
Q Consensus 181 ~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~ 211 (1031)
++|++++.+|..++.+++|++|+|++|.+++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 5555554445555555555555555555443
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=4e-17 Score=166.51 Aligned_cols=128 Identities=27% Similarity=0.303 Sum_probs=61.6
Q ss_pred cEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCc-cccccccceEEEeeccccCCCCCccccCcccCceeeccC
Q 043316 104 MYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQ-EIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCH 182 (1031)
Q Consensus 104 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1031)
+++++++|+++ .+|..+.. +|++|+|++|++++..|. .++++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666663 55554433 555566665555533332 245555555555555555544444444444444444444
Q ss_pred cccCCCCCCcccccccccEEEecccccccccCcccccccccccccccccccc
Q 043316 183 NNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLR 234 (1031)
Q Consensus 183 n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 234 (1031)
|++++..|..|+++++|++|+|++|++++.+|..|+.+++|++|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 4444444444444444444444444444444444444444444444444443
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=6.5e-17 Score=161.25 Aligned_cols=131 Identities=24% Similarity=0.224 Sum_probs=72.0
Q ss_pred CcccEEecCCCcCc-CCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceee
Q 043316 101 PHLMYLNLSCNVLY-GNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLT 179 (1031)
Q Consensus 101 ~~l~~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 179 (1031)
++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|++++|++++.+|..++.+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45666666666665 55665556666666666666665533 4555556666666666665544555555555555555
Q ss_pred ccCcccCCCCC--CcccccccccEEEecccccccccC---cccccccccccccccccccc
Q 043316 180 LCHNNFSGRIP--PSLGNLSNLAYLYLNNNSLFGSIP---NVMGNLNSLSILDLSQNQLR 234 (1031)
Q Consensus 180 L~~n~l~~~ip--~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 234 (1031)
|++|.+++ +| ..++++++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 55555552 22 445555555555555555553222 24455555555555555544
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.6e-16 Score=158.29 Aligned_cols=133 Identities=23% Similarity=0.186 Sum_probs=82.4
Q ss_pred CCcCcEeeCCCCccc-CCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEE
Q 043316 124 LSKLRALDLGNNQLS-GVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYL 202 (1031)
Q Consensus 124 l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L 202 (1031)
.++|++|+|++|+++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367788888888877 67777777777777777777777643 566666667777777776665566656566666666
Q ss_pred Eeccccccccc-CcccccccccccccccccccccccC---ccccccCcccEEEeecCcCC
Q 043316 203 YLNNNSLFGSI-PNVMGNLNSLSILDLSQNQLRGSIP---FSLANLSNLGILYLYKNSLF 258 (1031)
Q Consensus 203 ~l~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~N~l~ 258 (1031)
++++|++++.. +..++.+++|++|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 66666665321 1445555555555555555553222 24444455555555544443
No 381
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=5.3e-16 Score=176.62 Aligned_cols=264 Identities=11% Similarity=0.090 Sum_probs=159.6
Q ss_pred ccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceec
Q 043316 341 SSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRF 420 (1031)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 420 (1031)
..++.+.+.+ .++.+....|.+. +|+.+.+.+| ++.+...+|.++ +|+.+.+.. .+..+.+.+|.++.+|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4455555543 3444445556654 5777777655 554555566663 566666664 555566666666666666666
Q ss_pred cccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCC
Q 043316 421 NQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGK 500 (1031)
Q Consensus 421 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 500 (1031)
.+|++..+...+|. ..+|+.+.|.. .++.+...+|.+++ +|+.+++.+| ++.+
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~-~l~~I~~~aF~~~~------------------------~L~~l~l~~~-l~~I 240 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPV-TLKEIGSQAFLKTS------------------------QLKTIEIPEN-VSTI 240 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCT-TCCEECTTTTTTCT------------------------TCCCEECCTT-CCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCC-chheehhhHhhCCC------------------------CCCEEecCCC-ccCc
Confidence 66666666666665 35666666653 25544444444444 4444444443 3334
Q ss_pred ChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCC-----CCCcccccCCCccceecccCcccCCCCch
Q 043316 501 IPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLS-----SSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575 (1031)
Q Consensus 501 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 575 (1031)
...+|.+ .+|+.+.+ .|.++.....+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. |.++.+...
T Consensus 241 ~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 4444544 45555555 23344344556666666666666665543 3455667777777777777 446666667
Q ss_pred hhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCC-cceEEecccccc
Q 043316 576 EFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMR-SLSRIDIAYNEL 641 (1031)
Q Consensus 576 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l 641 (1031)
+|.++.+|+.++|..| ++...+..|.++ +|+.+++++|.+..+.+..|..++ +++.|.+..|.+
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 7777777777777554 554556677777 788888888877777777777764 577777766543
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=9.3e-17 Score=156.56 Aligned_cols=128 Identities=23% Similarity=0.195 Sum_probs=83.8
Q ss_pred CCcccEEecCCCcCc-CCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCcee
Q 043316 100 FPHLMYLNLSCNVLY-GNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVL 178 (1031)
Q Consensus 100 l~~l~~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 178 (1031)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|++++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356777777777776 67777777777777777777777644 566667777777777777765566666666666666
Q ss_pred eccCcccCCC-CCCcccccccccEEEecccccccccC---ccccccccccccccc
Q 043316 179 TLCHNNFSGR-IPPSLGNLSNLAYLYLNNNSLFGSIP---NVMGNLNSLSILDLS 229 (1031)
Q Consensus 179 ~L~~n~l~~~-ip~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~l~~L~~L~L~ 229 (1031)
++++|.+++. .|..++++++|++|++++|.+++..+ ..++.+++|++||++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6666666642 23556666666666666666664333 345566666666654
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=1.7e-15 Score=172.39 Aligned_cols=251 Identities=10% Similarity=0.090 Sum_probs=131.8
Q ss_pred cccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccc
Q 043316 336 SIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSL 415 (1031)
Q Consensus 336 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 415 (1031)
+|.++ +|+.+.+.++ ++.+....|.+. +|+.+.+.+ .++.+.+.+|.++++|+.+++.+|+++.+....|. ..+|
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 34443 4555555544 444444455553 466666654 45444555666666666666666666666666666 3667
Q ss_pred cceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCC
Q 043316 416 ERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSN 495 (1031)
Q Consensus 416 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N 495 (1031)
+.+.+. +++..+...+|..+++|+.+++..| ++.+...+|.+ ..|+.+.+. +.+......+|.++++|+.+++.+|
T Consensus 206 ~~l~lp-~~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 206 EEVLLP-VTLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp SEEECC-TTCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESS
T ss_pred CEEEeC-CchheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCc
Confidence 777766 3366666777777777777777653 45455555544 344444442 3333333445555555566655555
Q ss_pred cccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCch
Q 043316 496 HIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPT 575 (1031)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 575 (1031)
.+.. +.+....+.+|.++++|+.++|. |.++.+...+|.++++|+.++|..| ++.+.+.
T Consensus 282 ~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 282 TFND-------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CCCC-------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred cccC-------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 4430 00012233445555555555555 2344344445555555555555333 4444445
Q ss_pred hhccccccCceeccCcccCCcCCccccCcc-cchhhhcCCCcc
Q 043316 576 EFEKLIHLSELDLSHNFLQGEIPPQICNME-SLEELNLSHNNL 617 (1031)
Q Consensus 576 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l 617 (1031)
+|.++ +|+.+++++|.+....+..|..++ +++.|++..|.+
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 55555 555555555555544444454442 455555554443
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=5.1e-16 Score=158.24 Aligned_cols=127 Identities=26% Similarity=0.349 Sum_probs=91.8
Q ss_pred eeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcc
Q 043316 513 KLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNF 592 (1031)
Q Consensus 513 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 592 (1031)
.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4455555554 3343322 46777777777776 566677777777777777777777777777777777777777777
Q ss_pred cCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccC
Q 043316 593 LQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 593 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
|++..|..|..+++|+.|+|++|+|+.+.+..|..+++|+.|++++|+|.|
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 776666777778888888888888887777778888888888888888876
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.6e-16 Score=154.86 Aligned_cols=84 Identities=24% Similarity=0.244 Sum_probs=37.9
Q ss_pred CcCcEeeCCCCccc-CCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEE
Q 043316 125 SKLRALDLGNNQLS-GVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLY 203 (1031)
Q Consensus 125 ~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~ 203 (1031)
++|++|++++|.++ +.+|..++.+++|++|++++|.+++. ..++.+++|++|+|++|.+++.+|..++++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 44444444445555555444444422 3344444444444444444433343333344444444
Q ss_pred ecccccc
Q 043316 204 LNNNSLF 210 (1031)
Q Consensus 204 l~~n~l~ 210 (1031)
+++|+++
T Consensus 95 ls~N~i~ 101 (149)
T 2je0_A 95 LSGNKIK 101 (149)
T ss_dssp CTTSCCC
T ss_pred CCCCcCC
Confidence 4444443
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.4e-15 Score=155.08 Aligned_cols=107 Identities=28% Similarity=0.356 Sum_probs=45.5
Q ss_pred cccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeecc
Q 043316 102 HLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLC 181 (1031)
Q Consensus 102 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1031)
+|++|+|++|.++ .+|..+.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4444444444444 344444444444444444444443333344444444444444444443333334444444444444
Q ss_pred CcccCCCCCCcccccccccEEEeccccc
Q 043316 182 HNNFSGRIPPSLGNLSNLAYLYLNNNSL 209 (1031)
Q Consensus 182 ~n~l~~~ip~~~~~l~~L~~L~l~~n~l 209 (1031)
+|.+++..+..|.++++|++|+|++|.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 4444422222333344444444444433
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.62 E-value=1e-17 Score=172.07 Aligned_cols=135 Identities=23% Similarity=0.290 Sum_probs=76.1
Q ss_pred CCCcccEEecCCCcCcCCCcc------ccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCc
Q 043316 99 SFPHLMYLNLSCNVLYGNIPP------QISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKL 172 (1031)
Q Consensus 99 ~l~~l~~L~l~~n~~~~~~p~------~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 172 (1031)
....++.++++.+.++|.+|+ .++.+++|++|+|++|++++ +| .++++++|++|++++|+++ .+|..++.+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344555666666666666554 66666666666666666664 45 5666666666666666665 455555555
Q ss_pred ccCceeeccCcccCCCCCCcccccccccEEEecccccccccC-cccccccccccccccccccccccC
Q 043316 173 SLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSIP-NVMGNLNSLSILDLSQNQLRGSIP 238 (1031)
Q Consensus 173 ~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p 238 (1031)
++|++|+|++|++++ +| .++++++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 556666666665553 34 45555555555555555542111 244555555555555555544433
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=1.6e-15 Score=152.61 Aligned_cols=132 Identities=30% Similarity=0.341 Sum_probs=85.4
Q ss_pred ceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCc
Q 043316 512 NKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHN 591 (1031)
Q Consensus 512 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 591 (1031)
+.+++++|+++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444455544 233222 246666666666666555555666667777777777776666666667777777777777
Q ss_pred ccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccCCCC
Q 043316 592 FLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 592 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
+|++..+..+..+++|++|+|++|+|+++.+..|..+++|++|++++|+++|..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7775555556677777777777777777666666777777777777777776554
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=5.7e-16 Score=171.62 Aligned_cols=143 Identities=12% Similarity=0.147 Sum_probs=102.2
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhh-hh---------hhcHH--------HHHHHHHHHhcCCCCce
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLF-DE---------MADQD--------EFLNEVLALTEIRHRNI 821 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~---------~~~~~--------~~~~Ei~~l~~l~h~ni 821 (1031)
-|++.++||+|++|.||+|...+|+.||||+++..... .. ..... ...+|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38899999999999999999889999999987543210 00 00011 12345666666644433
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCC
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSE 901 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 901 (1031)
.-..-+... ..++||||++|++|.++... .....++.|++.++.|||+. |||||||||.|||++++
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREE 241 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEE
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCC
Confidence 221111111 23799999999888765432 23457889999999999999 99999999999999887
Q ss_pred Cc----------eEEeccccccccC
Q 043316 902 HE----------AHVSDFGIAKFLN 916 (1031)
Q Consensus 902 ~~----------~kl~Dfg~a~~~~ 916 (1031)
+. +.|+||+-+....
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCcccccccccceEEEEeCCcccCC
Confidence 73 8999999887643
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=2.1e-17 Score=169.68 Aligned_cols=155 Identities=21% Similarity=0.328 Sum_probs=79.5
Q ss_pred cccCCcCcEeeCCCCcccCCCCc------cccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQ------EIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLG 194 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~------~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~ 194 (1031)
+.....++.++++.+.++|.+|. .++.+++|++|++++|++++ +| .++.+++|++|+|++|.++ .+|..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~-- 88 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENL-- 88 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSH--
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccch--
Confidence 45556677777777777766664 45555555555555555542 44 4444444444444444444 34444
Q ss_pred ccccccEEEecccccccccCcccccccccccccccccccccccCccccccCcccEEEeecCcCCCCCC-ccccccccccc
Q 043316 195 NLSNLAYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKNSLFGFIP-SVIGNLKSLFE 273 (1031)
Q Consensus 195 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~ 273 (1031)
++.+++|++|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++
T Consensus 89 ----------------------~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 89 ----------------------DAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp ----------------------HHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred ----------------------hhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 4444444444444444442 33 34444455555555555443221 24455555555
Q ss_pred cccccccccccCCc----------ccccCCCCCeeeeccCccC
Q 043316 274 LDLSENQLFGSIPL----------SFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 274 L~Ls~N~l~~~~p~----------~~~~l~~L~~L~L~~N~l~ 306 (1031)
|++++|.+++.+|. .+..+++|+.|+ +|.++
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 55555555544333 255666666665 45544
No 391
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=3.3e-15 Score=150.23 Aligned_cols=134 Identities=24% Similarity=0.269 Sum_probs=86.1
Q ss_pred CccceeEeCCCCCEEEEEecCCccccccCCccccCCCcccEEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCcc
Q 043316 65 CTWFGIFCNLVGRVISISLSSLGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQE 144 (1031)
Q Consensus 65 C~w~gv~c~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 144 (1031)
|.|.+|.|+..+ ++ .+|. .-.++|++|++++|++++..+..++.+++|++|+|++|++++..+..
T Consensus 7 C~~~~l~~~~~~-l~-----------~~p~---~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNSKG-LT-----------SVPT---GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCSSC-CS-----------SCCT---TCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecCCC-Cc-----------cCCC---CCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 789999996532 11 1222 12356777777777777555555677777777777777777555555
Q ss_pred ccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccccEEEeccccccccc
Q 043316 145 IGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNLAYLYLNNNSLFGSI 213 (1031)
Q Consensus 145 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L~~L~l~~n~l~~~~ 213 (1031)
++.+++|++|++++|++++..|..++.+++|++|+|++|++++..+..+.++++|++|++++|.+++..
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 677777777777777777544445666677777777777766433344566666666666666666433
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=3.2e-14 Score=162.74 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=38.7
Q ss_pred CCCCCCccccccccccccccccccccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhc
Q 043316 257 LFGFIPSVIGNLKSLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGL 324 (1031)
Q Consensus 257 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 324 (1031)
++.+...+|.++.+|+.+.|..+ ++..-..+|.++++|+.+++.++ ++..-..+|.++.+|+.+.+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~ 124 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILL 124 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcc
Confidence 34444566777777887777643 55444557777777777777543 33233345555555554443
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=5.9e-15 Score=148.15 Aligned_cols=131 Identities=18% Similarity=0.265 Sum_probs=78.9
Q ss_pred ccCCCcccEEecCCCcCcCCCccccccCC-cCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCcc-ccCccc
Q 043316 97 FSSFPHLMYLNLSCNVLYGNIPPQISNLS-KLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLE-IGKLSL 174 (1031)
Q Consensus 97 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~ 174 (1031)
+.+.++|++|++++|+++ .+|. +..+. +|++|+|++|.+++. ..++.+++|++|++++|++++ +|+. ++.+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCC
Confidence 455666777777777776 3443 44444 677777777776643 456666666666666666663 3433 366666
Q ss_pred CceeeccCcccCCCCCC--cccccccccEEEecccccccccCcc----cccccccccccccccccc
Q 043316 175 INVLTLCHNNFSGRIPP--SLGNLSNLAYLYLNNNSLFGSIPNV----MGNLNSLSILDLSQNQLR 234 (1031)
Q Consensus 175 L~~L~L~~n~l~~~ip~--~~~~l~~L~~L~l~~n~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 234 (1031)
|++|+|++|.++ .+|. .++++++|++|++++|.++ .+|.. ++.+++|++||+++|...
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 666666666664 4554 5666666666666666665 34443 555566666666655544
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=7.4e-14 Score=159.66 Aligned_cols=318 Identities=11% Similarity=0.044 Sum_probs=172.2
Q ss_pred ccccCCcccccCCCCCeeeeccCccCCCCCCCCCChhhhhhhhccccccCCCCcccccccccCceEEcccCCCcCccCCc
Q 043316 281 LFGSIPLSFSNLSSLTLMSLFNNSLSGSIPPTQGNLEALSELGLYINQLDGVIPPSIGNLSSLRTLYLYDNGFYGLVPNE 360 (1031)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 360 (1031)
++.+-..+|.++++|+.+.+.. .++..-..+|.++++|+.+++..+ ++..-...|.++++|+.+.+..+ +.......
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 4444456788888888888864 355444556666777776666543 43333445666666666555433 33333334
Q ss_pred cCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceeccccccccccccccCCCCCCC
Q 043316 361 IGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLT 440 (1031)
Q Consensus 361 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 440 (1031)
|.....++........ .....+|.++++|+.+.+.++ +..+....|.++.+|+.+.+
T Consensus 136 F~~~~~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l-------------------- 192 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVT--VIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKL-------------------- 192 (394)
T ss_dssp TTTCCCSEEECCTTCC--EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCC--------------------
T ss_pred eecccccccccCcccc--ccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEc--------------------
Confidence 4444332222222111 122334555555555555432 23333444444444554444
Q ss_pred eeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccCCChhhhhccccCceeeccccc
Q 043316 441 FLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ 520 (1031)
Q Consensus 441 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 520 (1031)
..| ++.+...+|.+...|+.+.+..+... +.+.+....+|+.+.+..+ +..+....|.+...|+.+.+..+.
T Consensus 193 ----~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~ 264 (394)
T 4fs7_A 193 ----PRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNK 264 (394)
T ss_dssp ----CTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTT
T ss_pred ----CCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCc
Confidence 433 34444444444444444444433221 2222333456666666543 233445556666666666666654
Q ss_pred ccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCcc
Q 043316 521 LSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQ 600 (1031)
Q Consensus 521 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 600 (1031)
.+ .....|..+..++.+....+.+. ...|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++.....+
T Consensus 265 ~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 265 LR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp CE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 43 44556666666766666655432 245666667777776654 55455666777777777777544 55444566
Q ss_pred ccCcccchhhhcCCCccCCCCccccccCCcceEEecccc
Q 043316 601 ICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYN 639 (1031)
Q Consensus 601 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 639 (1031)
|.++.+|+.+++..| ++.+...+|..+++|+.+++..+
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 777777777777655 66666677777777777776544
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=7.5e-15 Score=147.40 Aligned_cols=132 Identities=25% Similarity=0.280 Sum_probs=59.1
Q ss_pred cccCCcCcEeeCCCCcccCCCCccccccc-cceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccccccc
Q 043316 121 ISNLSKLRALDLGNNQLSGVIPQEIGHLT-CLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLSNL 199 (1031)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~~L 199 (1031)
+.++.+|++|++++|+++ .+|. +..+. +|++|++++|++++ + .. ++++++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~------------------------l~~l~~L 66 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DG------------------------FPLLRRL 66 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CC------------------------CCCCSSC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cc------------------------cccCCCC
Confidence 445555566666666555 3332 33333 45555555554442 1 23 3444444
Q ss_pred cEEEecccccccccCcccccccccccccccccccccccCc--cccccCcccEEEeecCcCCCCCCc----cccccccccc
Q 043316 200 AYLYLNNNSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPF--SLANLSNLGILYLYKNSLFGFIPS----VIGNLKSLFE 273 (1031)
Q Consensus 200 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~ 273 (1031)
++|++++|++++..|..++.+++|++|+|++|+++ .+|. .+..+++|+.|++++|.++. +|. .+..+++|+.
T Consensus 67 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 67 KTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp CEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSE
T ss_pred CEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccce
Confidence 44444444444222222244444444444444443 2333 34444444555555554442 222 2445555555
Q ss_pred ccccccccc
Q 043316 274 LDLSENQLF 282 (1031)
Q Consensus 274 L~Ls~N~l~ 282 (1031)
||+++|.+.
T Consensus 145 Ld~~~n~~~ 153 (176)
T 1a9n_A 145 LDFQKVKLK 153 (176)
T ss_dssp ETTEECCHH
T ss_pred eCCCcCCHH
Confidence 555555443
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=8.1e-14 Score=138.76 Aligned_cols=109 Identities=27% Similarity=0.375 Sum_probs=74.3
Q ss_pred cceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCC
Q 043316 535 LQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSH 614 (1031)
Q Consensus 535 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 614 (1031)
.+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456666666666 3554443 5667777777777666666677777777777777777755555566777777777777
Q ss_pred CccCCCCccccccCCcceEEecccccccCCCC
Q 043316 615 NNLFDLIPGCFEEMRSLSRIDIAYNELQGPIP 646 (1031)
Q Consensus 615 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 646 (1031)
|+|+++.+..|..+++|++|++++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 77777766667777777777777777776544
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=3.4e-13 Score=134.65 Aligned_cols=103 Identities=29% Similarity=0.373 Sum_probs=72.7
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 184 (1031)
.+++++|+++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4566666664 6666554 677777887777776667777777777777777777774333345777777777777777
Q ss_pred cCCCCCCcccccccccEEEecccccc
Q 043316 185 FSGRIPPSLGNLSNLAYLYLNNNSLF 210 (1031)
Q Consensus 185 l~~~ip~~~~~l~~L~~L~l~~n~l~ 210 (1031)
+++..|..|.++++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 77444445777788888888888776
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=4.2e-13 Score=133.51 Aligned_cols=104 Identities=26% Similarity=0.275 Sum_probs=66.8
Q ss_pred EEecCCCcCcCCCccccccCCcCcEeeCCCCcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcc
Q 043316 105 YLNLSCNVLYGNIPPQISNLSKLRALDLGNNQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNN 184 (1031)
Q Consensus 105 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 184 (1031)
.+++++|.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 3444455554 4555443 566777777777776666667777777777777777764444445667777777777777
Q ss_pred cCCCCCCcccccccccEEEeccccccc
Q 043316 185 FSGRIPPSLGNLSNLAYLYLNNNSLFG 211 (1031)
Q Consensus 185 l~~~ip~~~~~l~~L~~L~l~~n~l~~ 211 (1031)
+++..|..|.++++|++|+|++|.++.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 775444557777777777777777663
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=2.2e-13 Score=136.07 Aligned_cols=106 Identities=25% Similarity=0.379 Sum_probs=63.9
Q ss_pred ceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCC
Q 043316 536 QYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHN 615 (1031)
Q Consensus 536 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 615 (1031)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45556666554 4444443 55666666666666555666666666666666666666444444566666666666666
Q ss_pred ccCCCCccccccCCcceEEecccccccCC
Q 043316 616 NLFDLIPGCFEEMRSLSRIDIAYNELQGP 644 (1031)
Q Consensus 616 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 644 (1031)
+|+++.+..|..+++|++|++++|+|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 66666555566666666666666666653
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.34 E-value=1.1e-11 Score=141.66 Aligned_cols=319 Identities=12% Similarity=0.141 Sum_probs=147.2
Q ss_pred CCCCccccccc-cccccccccccccccCCcccccCCCCCeeeeccCc---cCCCCCCCCCChhhhhhhhccccccCCCCc
Q 043316 259 GFIPSVIGNLK-SLFELDLSENQLFGSIPLSFSNLSSLTLMSLFNNS---LSGSIPPTQGNLEALSELGLYINQLDGVIP 334 (1031)
Q Consensus 259 ~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 334 (1031)
.+...+|.+.+ .|+.+.+..+ ++..-..+|.++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++....
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 33455677764 5888888654 554556688888888888887764 44333445666666665555433 332333
Q ss_pred ccccccccCceEEcccCCCcCccCCccCcccccceEEccccccCCCccccccCCCCCceEeccCcccCCcCchhccCCcc
Q 043316 335 PSIGNLSSLRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTS 414 (1031)
Q Consensus 335 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 414 (1031)
..|..+.+|+.+.+..+ +.......|..+.+|+.+.+.++ +..+...+|.+ ..
T Consensus 131 ~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-------------------------~~~I~~~aF~~-~~ 183 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-------------------------VTAIEERAFTG-TA 183 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-------------------------CCEECTTTTTT-CC
T ss_pred hhhhhhcccccccccce-eeeecccceecccccccccccce-------------------------eeEeccccccc-cc
Confidence 44555555555555432 22233334455555555555433 22233333332 23
Q ss_pred ccceeccccccccccccccCCCCCCCeeccccccccCcccccccC-------------CCccccccCcccccCCCCCCCc
Q 043316 415 LERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRN-------------FPKLGTFNASMNNIYGSIPPEI 481 (1031)
Q Consensus 415 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-------------~~~L~~L~l~~N~i~~~~p~~~ 481 (1031)
|+.+.+.. .+..+...+|..+.+++......+.........+.. ...+..+.+. +.+......+|
T Consensus 184 l~~i~ip~-~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF 261 (394)
T 4gt6_A 184 LTQIHIPA-KVTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAF 261 (394)
T ss_dssp CSEEEECT-TCCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTT
T ss_pred eeEEEECC-cccccccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcC-CcceEccccee
Confidence 44444432 123334444444444444444433332221111111 1111111111 11222223345
Q ss_pred cCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccce
Q 043316 482 GDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHY 561 (1031)
Q Consensus 482 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 561 (1031)
.++.+|+.+.+.++... +...+|.++.+|+.+.+. +.++.....+|.++.+|+.++|..+ ++.+...+|.++.+|+.
T Consensus 262 ~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~ 338 (394)
T 4gt6_A 262 DSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLER 338 (394)
T ss_dssp TTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred eecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCE
Confidence 55555555555544332 444555555555555553 2333334445555555555555543 33334445555555555
Q ss_pred ecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCC
Q 043316 562 LNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHN 615 (1031)
Q Consensus 562 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 615 (1031)
+.+..+ ++.+...+|.++.+|+.+++.+|.... ..+.....|+.+.+..|
T Consensus 339 i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 339 IAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp EEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC--------
T ss_pred EEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCC
Confidence 555433 444444555555555555555554321 23344444444444433
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.31 E-value=1.4e-11 Score=140.58 Aligned_cols=288 Identities=12% Similarity=0.128 Sum_probs=143.5
Q ss_pred CceEEcccCCCcCccCCccCcccccceEEccccc---cCCCccccccCCCCCceEeccCcccCCcCchhccCCcccccee
Q 043316 343 LRTLYLYDNGFYGLVPNEIGYLKSLSKLELCRNH---LSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLR 419 (1031)
Q Consensus 343 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 419 (1031)
|+.+.+.++ ++.+-..+|.++.+|+.+.+.+|. ++.+...+|.++.+|+.+.+..+ ++.+....|.++.+|+.+.
T Consensus 66 L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 444444322 333333444444444444444432 33233344444555554444332 3334444455555555555
Q ss_pred ccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCCCcEEEeeCCcccC
Q 043316 420 FNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSKLQVLDLSSNHIVG 499 (1031)
Q Consensus 420 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 499 (1031)
+.. .+..+...+|..+..|+.+.+..+ ++.+...+|.+ ..|+.+.+..+- .......|..+.+++......+....
T Consensus 144 lp~-~~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~-~~i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPE-GVTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV-TRIGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC-CEECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccc-eeeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcc-cccccchhhhccccceeccccccccc
Confidence 532 234444445555555555555432 34444444433 234444443221 11223344445555555444433321
Q ss_pred CChhhh-------------hccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCccceecccC
Q 043316 500 KIPVQF-------------EKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSN 566 (1031)
Q Consensus 500 ~~p~~~-------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 566 (1031)
.....+ .....+..+.+. +.++.....+|.++..|+.+.+..+..+ +...+|.++++|+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~- 296 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS- 296 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-
T ss_pred ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-
Confidence 110000 011122222222 2233334456667777777777655443 455667777777777775
Q ss_pred cccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccc
Q 043316 567 NQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNEL 641 (1031)
Q Consensus 567 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 641 (1031)
+.++.+...+|.++.+|+.++|..+ ++.....+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|..
T Consensus 297 ~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 297 SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 4455555666777777777777654 44344566777777777777543 6666667777777777777776643
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=6.2e-14 Score=157.96 Aligned_cols=93 Identities=20% Similarity=0.121 Sum_probs=50.4
Q ss_pred ccccEEEeccccccc----ccCcccccccccccccccccccccc----cCccccccCcccEEEeecCcCCCC----CCcc
Q 043316 197 SNLAYLYLNNNSLFG----SIPNVMGNLNSLSILDLSQNQLRGS----IPFSLANLSNLGILYLYKNSLFGF----IPSV 264 (1031)
Q Consensus 197 ~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~ 264 (1031)
++|++|+|++|.++. .++..+..+++|++|+|++|+++.. ++..+...++|+.|+|++|.++.. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 455555555555542 2333344555566666666665532 234455556666666666666532 2233
Q ss_pred ccccccccccccccccccccCCccc
Q 043316 265 IGNLKSLFELDLSENQLFGSIPLSF 289 (1031)
Q Consensus 265 ~~~l~~L~~L~Ls~N~l~~~~p~~~ 289 (1031)
+...++|++|+|++|.|+......+
T Consensus 235 L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHhCCCCCEEeccCCCCCHHHHHHH
Confidence 4445667777777777664433333
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=1.7e-13 Score=154.36 Aligned_cols=159 Identities=23% Similarity=0.244 Sum_probs=99.8
Q ss_pred CCCcEEEeeCCcccCCChhhhhcc-----ccCceeecccccccCCCcccc-cccCccceeecCcCcCCCCCcccc-----
Q 043316 485 SKLQVLDLSSNHIVGKIPVQFEKL-----FSLNKLILNLNQLSGGVPLEF-GSLTELQYLDLSANKLSSSIPKSM----- 553 (1031)
Q Consensus 485 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~----- 553 (1031)
++|+.|+|++|.|+......+... ++|+.|+|++|.++......+ ..+++|++|+|++|.|++.....+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777777664444444433 567777777777664333222 235667777777777764433333
Q ss_pred cCCCccceecccCcccCCC----CchhhccccccCceeccCcccCCc----CCccccCcccchhhhcCCCccCCCC----
Q 043316 554 GNLSKLHYLNLSNNQFNHK----IPTEFEKLIHLSELDLSHNFLQGE----IPPQICNMESLEELNLSHNNLFDLI---- 621 (1031)
Q Consensus 554 ~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~---- 621 (1031)
...++|++|+|++|.|+.. ++..+..+++|++|||++|+|++. ++..+...++|++|+|++|.|++..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2356777777777777542 334456677788888888877642 2445566677888888888876532
Q ss_pred ccccccCCcceEEecccccccC
Q 043316 622 PGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 622 ~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
...+...++|++||+++|+++.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHhCCCCCEEeccCCCCCH
Confidence 2334456778888888887764
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1.3e-11 Score=138.50 Aligned_cols=92 Identities=22% Similarity=0.193 Sum_probs=56.3
Q ss_pred CccccccCCcCcEeeCCC-CcccCCCCccccccccceEEEeeccccCCCCCccccCcccCceeeccCcccCCCCCCcccc
Q 043316 117 IPPQISNLSKLRALDLGN-NQLSGVIPQEIGHLTCLRMLYFDVNHLHGSIPLEIGKLSLINVLTLCHNNFSGRIPPSLGN 195 (1031)
Q Consensus 117 ~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~ 195 (1031)
+|. |..+++|++|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|++|++|++|+|++|+|++..|..+..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 555 56666666666664 6666554555666666666666666666555556666666666666666666433334444
Q ss_pred cccccEEEecccccc
Q 043316 196 LSNLAYLYLNNNSLF 210 (1031)
Q Consensus 196 l~~L~~L~l~~n~l~ 210 (1031)
++ |++|+|++|.+.
T Consensus 103 ~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 103 LS-LQELVLSGNPLH 116 (347)
T ss_dssp CC-CCEEECCSSCCC
T ss_pred CC-ceEEEeeCCCcc
Confidence 44 777777777765
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=1.5e-11 Score=138.05 Aligned_cols=101 Identities=27% Similarity=0.243 Sum_probs=51.7
Q ss_pred eeccCc-ccCCCCCCcccccccccEEEecc-cccccccCcccccccccccccccccccccccCccccccCcccEEEeecC
Q 043316 178 LTLCHN-NFSGRIPPSLGNLSNLAYLYLNN-NSLFGSIPNVMGNLNSLSILDLSQNQLRGSIPFSLANLSNLGILYLYKN 255 (1031)
Q Consensus 178 L~L~~n-~l~~~ip~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 255 (1031)
++++++ +++ .+|. |..+++|++|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455554 555 3555 55555555555553 5555444455555555555555555555544545555555555555555
Q ss_pred cCCCCCCccccccccccccccccccc
Q 043316 256 SLFGFIPSVIGNLKSLFELDLSENQL 281 (1031)
Q Consensus 256 ~l~~~~p~~~~~l~~L~~L~Ls~N~l 281 (1031)
+|++..+..|..++ |+.|+|++|.+
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCc
Confidence 55544433333333 44444444443
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.16 E-value=9.8e-11 Score=125.63 Aligned_cols=148 Identities=15% Similarity=0.083 Sum_probs=115.1
Q ss_pred HHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCC
Q 043316 754 IIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQ 832 (1031)
Q Consensus 754 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~ 832 (1031)
+......|+.....+.|+.+.||++.. .++.+++|+...... .....+.+|+.+++.+. +..+.++++++.+.+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~----~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~ 83 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYK----GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG 83 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGT----TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccC----CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC
Confidence 345567888888889999999999976 468999999865321 12335778999988884 677889999999999
Q ss_pred eeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC-------------------------------
Q 043316 833 HSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD------------------------------- 881 (1031)
Q Consensus 833 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------- 881 (1031)
..|+||||++|.++.+.... ......++.+++++++.||+.
T Consensus 84 ~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (263)
T 3tm0_A 84 WSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDC 155 (263)
T ss_dssp EEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSG
T ss_pred ceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccc
Confidence 99999999999998776421 123447889999999999981
Q ss_pred -------------------------CCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 882 -------------------------CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 882 -------------------------~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
..+.++|+|++|.||+++.++.+.|+||+.+..
T Consensus 156 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 156 ENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 013589999999999998765567999987753
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.04 E-value=1.8e-12 Score=136.95 Aligned_cols=144 Identities=17% Similarity=0.128 Sum_probs=65.4
Q ss_pred CCCccceeEeCCC-CCEEEEEecC---CccccccCCccccCCCcccEEecCCCcCcCCCccc-cccCCcCcE--eeCCCC
Q 043316 63 SPCTWFGIFCNLV-GRVISISLSS---LGLNGTFQDFSFSSFPHLMYLNLSCNVLYGNIPPQ-ISNLSKLRA--LDLGNN 135 (1031)
Q Consensus 63 ~~C~w~gv~c~~~-~~v~~l~l~~---~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~-~~~l~~L~~--L~l~~n 135 (1031)
..|+|.|+.|+.. .+|+.+..++ .++.|.+.+..+..++. .|..+.|..++.++-+ +...+.|+. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 4689999999865 4676665544 34455555433333322 2222333333322211 333344444 455555
Q ss_pred cccCCCCc----cccccccceEEEeeccccCC--CCCccccCcccCceeeccCcccCCCCCCcccccc--cccEEEeccc
Q 043316 136 QLSGVIPQ----EIGHLTCLRMLYFDVNHLHG--SIPLEIGKLSLINVLTLCHNNFSGRIPPSLGNLS--NLAYLYLNNN 207 (1031)
Q Consensus 136 ~l~~~~p~----~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~~~l~--~L~~L~l~~n 207 (1031)
... .++. ...++++|+.|+|++|++++ .+|..++.+++|+.|+|++|++++. ..+..++ +|++|+|++|
T Consensus 154 ~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~N 230 (267)
T 3rw6_A 154 RRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGN 230 (267)
T ss_dssp SHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTS
T ss_pred HHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCC
Confidence 322 1221 11334455555555555554 3334444444555555555544422 2223232 4444444444
Q ss_pred cccc
Q 043316 208 SLFG 211 (1031)
Q Consensus 208 ~l~~ 211 (1031)
.+.+
T Consensus 231 pl~~ 234 (267)
T 3rw6_A 231 SLCD 234 (267)
T ss_dssp TTGG
T ss_pred cCcc
Confidence 4443
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.03 E-value=3e-09 Score=120.73 Aligned_cols=145 Identities=16% Similarity=0.173 Sum_probs=87.6
Q ss_pred CCccCCCCCcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCc
Q 043316 479 PEIGDSSKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSK 558 (1031)
Q Consensus 479 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 558 (1031)
..+....+|+.+.+..+ +..+...+|.+...|+.+.+..+ ++.....+|.++.+|+.+.+..+ ++.....+|.++++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34455566666666544 33345556666666776666554 44444556666677777766543 44344556666777
Q ss_pred cceecccCcccCCCCchhhccccccCceeccCcccCCcCCccccCcccchhhhcCCCccCCCCccccccC
Q 043316 559 LHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQGEIPPQICNMESLEELNLSHNNLFDLIPGCFEEM 628 (1031)
Q Consensus 559 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 628 (1031)
|+.+.+.++.++.+...+|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+..+ ++.+...+|...
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 777777766666566666777777777777544 44344556666677777666543 555555555544
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.00 E-value=5.4e-09 Score=118.58 Aligned_cols=147 Identities=16% Similarity=0.092 Sum_probs=86.8
Q ss_pred hhccCCccccceeccccccccccccccCCCCCCCeeccccccccCcccccccCCCccccccCcccccCCCCCCCccCCCC
Q 043316 407 KSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQNNLYGEISFNWRNFPKLGTFNASMNNIYGSIPPEIGDSSK 486 (1031)
Q Consensus 407 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~l~~ 486 (1031)
..|....+|+.+.+.. .+..+...+|..+..|+.+.+..+ ++.+...+|.+...|+.+.+..+ +.......|.++.+
T Consensus 211 ~~f~~~~~l~~i~~~~-~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITS-GVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCT-TCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeecc-ceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 3344444444444432 233444445555555555555443 44444555555555555555422 33333456677777
Q ss_pred CcEEEeeCCcccCCChhhhhccccCceeecccccccCCCcccccccCccceeecCcCcCCCCCcccccCCCc
Q 043316 487 LQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQLSGGVPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSK 558 (1031)
Q Consensus 487 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 558 (1031)
|+.+++.++.++.+...+|.++.+|+.+.|..+ ++.....+|.++.+|+.+.+..+ ++.+...+|.++..
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSC
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCC
Confidence 788888777777666777888888888887654 55455667888888888888655 55455667766543
No 410
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.98 E-value=5.3e-10 Score=119.73 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=99.7
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc--eeeeeeeEecCCeeEEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN--IIKFHGFCSNAQHSFIV 837 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~~~~~~~~~~~lv 837 (1031)
++.+....+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 34443333456669999998777888999997543 1234668888888875433 56789988888889999
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC-----------------------------------
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC----------------------------------- 882 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 882 (1031)
|||++|.++. ... . ....++.++++.++.||+..
T Consensus 94 ~e~i~G~~l~--~~~------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 94 LGEVPGQDLL--SSH------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EECCSSEETT--TSC------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEecCCcccC--cCc------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 9999998884 211 1 12357778888888888741
Q ss_pred --------------------CCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 883 --------------------LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 883 --------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
.+.++|+|++|.||+++.++.+.|+|||.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11389999999999998776677999998764
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=1e-10 Score=130.46 Aligned_cols=83 Identities=12% Similarity=0.130 Sum_probs=41.0
Q ss_pred ccccccccccccccccccCcccc---ccCcccEEEeecCcCCCC----CCccccccccccccccccccccccCCccccc-
Q 043316 220 LNSLSILDLSQNQLRGSIPFSLA---NLSNLGILYLYKNSLFGF----IPSVIGNLKSLFELDLSENQLFGSIPLSFSN- 291 (1031)
Q Consensus 220 l~~L~~L~L~~N~l~~~~p~~l~---~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~- 291 (1031)
+++|++|+|++|.+....+..+. .+++|++|+|+.|.+++. ++..+.++++|+.|+|++|.++...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 45555555555555432222221 345666666666665542 2233345566666666666655332222222
Q ss_pred CCCCCeeeeccCc
Q 043316 292 LSSLTLMSLFNNS 304 (1031)
Q Consensus 292 l~~L~~L~L~~N~ 304 (1031)
+ ...++++.++
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 1 2446666665
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=1.6e-10 Score=128.93 Aligned_cols=64 Identities=19% Similarity=0.184 Sum_probs=39.3
Q ss_pred ccCcccEEEeecCcCCCCCCcccc---cccccccccccccccccc----CCcccccCCCCCeeeeccCccC
Q 043316 243 NLSNLGILYLYKNSLFGFIPSVIG---NLKSLFELDLSENQLFGS----IPLSFSNLSSLTLMSLFNNSLS 306 (1031)
Q Consensus 243 ~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 306 (1031)
.+++|+.|+|++|.++...+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 356777777777776543322222 466777777777777643 2333455677777777777665
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.91 E-value=4.2e-09 Score=118.44 Aligned_cols=143 Identities=15% Similarity=0.283 Sum_probs=107.1
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEcc--chhhhhhhhcHHHHHHHHHHHhcCC--CCceeeeeeeEecC---CeeE
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFN--SQLLFDEMADQDEFLNEVLALTEIR--HRNIIKFHGFCSNA---QHSF 835 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~---~~~~ 835 (1031)
..+.++.|.++.||++... +..+++|+.. .... ......+.+|+.+++.+. +..++++++++.+. +..|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~---~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL---LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC---CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 4567999999999999875 4688899876 3221 122456778999998886 45688999988776 5689
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC---------------------------------
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC--------------------------------- 882 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------- 882 (1031)
+||||++|..+.+... ..++..+...++.++++.|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999999988754221 23567788899999999999999731
Q ss_pred ----------------------CCCeeeCCCCCCCeeeCCCCc--eEEeccccccc
Q 043316 883 ----------------------LPPIVHGDISSKNVLLDSEHE--AHVSDFGIAKF 914 (1031)
Q Consensus 883 ----------------------~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 914 (1031)
.+.++|||++|.||+++.++. +.|+||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247899999999999997763 68999999875
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.74 E-value=3.8e-09 Score=115.80 Aligned_cols=184 Identities=21% Similarity=0.213 Sum_probs=121.1
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCc--eeeeeeeEecCC---eeEEE
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRN--IIKFHGFCSNAQ---HSFIV 837 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv 837 (1031)
.+.++.|....||++. +.+++|+.... .....+.+|..+++.+. +.. +.+++......+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999874 46889886432 23567889999988773 322 445555543333 45899
Q ss_pred EEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC------------------------------------
Q 043316 838 SEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD------------------------------------ 881 (1031)
Q Consensus 838 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------ 881 (1031)
||+++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 95 m~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 99999988865322 2356677778888888888888861
Q ss_pred -------------------CCCCeeeCCCCCCCeeeCC--CCceEEeccccccccCCCCCC--cee------------ec
Q 043316 882 -------------------CLPPIVHGDISSKNVLLDS--EHEAHVSDFGIAKFLNPHSSN--WTA------------FA 926 (1031)
Q Consensus 882 -------------------~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~--~~~------------~~ 926 (1031)
..+.++|+|++|.||+++. ...+.|+||+.+..-++.... ... ..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 1135799999999999998 456889999998764321100 000 00
Q ss_pred cccCccc-cccccccCCCccccchhhhHHHHHHHhCCCC
Q 043316 927 GTFGYAA-PEIAHMMRATEKYDVHSFGVLALEVIKGNHP 964 (1031)
Q Consensus 927 gt~~y~a-PE~~~~~~~~~~sDvwslG~il~elltG~~P 964 (1031)
..+++.. |+.... .....+.|++|.++|++.+|+.+
T Consensus 250 ~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~ 286 (304)
T 3sg8_A 250 NHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMD 286 (304)
T ss_dssp HHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHH
Confidence 0111122 222211 12236899999999999999877
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.60 E-value=1.3e-07 Score=104.35 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=100.8
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCC----CceeeeeeeEecCCeeE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRH----RNIIKFHGFCSNAQHSF 835 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h----~niv~l~~~~~~~~~~~ 835 (1031)
.+...+.++.|....||++ ++.+++|+..... ....+.+|..+++.+.+ ..+.+++++ +..+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~------~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS------VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH------HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH------HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 5566778999999999998 6678899864432 23457889988887765 234555554 5678
Q ss_pred EEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCC--------------------------------
Q 043316 836 IVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCL-------------------------------- 883 (1031)
Q Consensus 836 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------- 883 (1031)
+||||++|.++.+... ..++..+...++.++++.++.||+...
T Consensus 104 lvme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 104 NIMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EEEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 9999999988864321 124556667777888888887774321
Q ss_pred ----------------------------CCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 884 ----------------------------PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 884 ----------------------------~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
+.++|+|++|.||+++.++.+.|+||+.+..-+
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999986667999999987543
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.47 E-value=1.8e-08 Score=106.36 Aligned_cols=112 Identities=20% Similarity=0.212 Sum_probs=83.4
Q ss_pred cccCCccccCCCcccE--EecCCCcC---cCCCccccccCCcCcEeeCCCCcccC--CCCccccccccceEEEeeccccC
Q 043316 90 GTFQDFSFSSFPHLMY--LNLSCNVL---YGNIPPQISNLSKLRALDLGNNQLSG--VIPQEIGHLTCLRMLYFDVNHLH 162 (1031)
Q Consensus 90 g~~~~~~~~~l~~l~~--L~l~~n~~---~~~~p~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~n~l~ 162 (1031)
+.++-..|...+.|.. ++++.|.. .+.++-...++++|++|+|++|+|++ .+|..++.+++|+.|+|++|+++
T Consensus 130 ~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 130 QALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp TEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred cccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 3333334566667776 77888843 33333333678999999999999997 56778889999999999999998
Q ss_pred CCCCccccCcc--cCceeeccCcccCCCCCC-------cccccccccEEE
Q 043316 163 GSIPLEIGKLS--LINVLTLCHNNFSGRIPP-------SLGNLSNLAYLY 203 (1031)
Q Consensus 163 ~~~p~~~~~l~--~L~~L~L~~n~l~~~ip~-------~~~~l~~L~~L~ 203 (1031)
+. .++..++ +|++|+|++|.+++.+|. .+..+++|+.||
T Consensus 210 ~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 210 SE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp SG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred Cc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 54 4556666 999999999999988874 256677777664
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=3e-08 Score=99.62 Aligned_cols=119 Identities=13% Similarity=0.173 Sum_probs=54.6
Q ss_pred hhhccccCceeecccc-cccCC----CcccccccCccceeecCcCcCCCCCcccccCCCccceecccCcccCCCCchhhc
Q 043316 504 QFEKLFSLNKLILNLN-QLSGG----VPLEFGSLTELQYLDLSANKLSSSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFE 578 (1031)
Q Consensus 504 ~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 578 (1031)
.+...+.|++|+|++| .+... +...+...++|++|+|++|.|.+..... +...+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~--------------------l~~~L~ 90 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFA--------------------LAEMLK 90 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHH--------------------HHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHH--------------------HHHHHH
Confidence 3444555666666665 55422 1223333455555555555554211111 122233
Q ss_pred cccccCceeccCcccCCc----CCccccCcccchhhhc--CCCccCCCC----ccccccCCcceEEeccccccc
Q 043316 579 KLIHLSELDLSHNFLQGE----IPPQICNMESLEELNL--SHNNLFDLI----PGCFEEMRSLSRIDIAYNELQ 642 (1031)
Q Consensus 579 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 642 (1031)
..+.|++|+|++|.|.+. +...+...++|++|+| ++|.|.... ...+...++|++|++++|.+.
T Consensus 91 ~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 91 VNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred hCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334455555555554422 2333444445555555 455554421 223334456666666666553
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=6.2e-08 Score=97.32 Aligned_cols=114 Identities=13% Similarity=0.141 Sum_probs=77.1
Q ss_pred ccCCCCCcEEEeeCC-cccCC----ChhhhhccccCceeecccccccCC----CcccccccCccceeecCcCcCCCC---
Q 043316 481 IGDSSKLQVLDLSSN-HIVGK----IPVQFEKLFSLNKLILNLNQLSGG----VPLEFGSLTELQYLDLSANKLSSS--- 548 (1031)
Q Consensus 481 ~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~--- 548 (1031)
+...++|++|+|++| .|... +...+...++|++|+|++|+|+.. +...+...++|++|+|++|.|++.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 445677888888888 77532 233445567888888888888743 233445557888888888888743
Q ss_pred -CcccccCCCccceecc--cCcccCCC----CchhhccccccCceeccCcccC
Q 043316 549 -IPKSMGNLSKLHYLNL--SNNQFNHK----IPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 549 -~p~~~~~l~~L~~L~L--s~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
+...+...+.|++|+| ++|.|+.. +.+.+...++|++|+|++|.|.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3455666677888888 77887643 3344555577778888777775
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=3.6e-06 Score=90.17 Aligned_cols=136 Identities=15% Similarity=0.211 Sum_probs=98.7
Q ss_pred ceeecCCCc-cEEEEEeC-CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEEEec
Q 043316 765 YCIGKGRQG-SVYKAELP-SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 765 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 841 (1031)
+.+..|..+ .||+.... +++.++||+-... ....+.+|...++.+. +--+.++++++.+++..++|||++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l 102 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI 102 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee
Confidence 346667666 59998654 4678899985432 2456778888888774 334778899999999999999999
Q ss_pred cCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCC---------------------------------------
Q 043316 842 DRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDC--------------------------------------- 882 (1031)
Q Consensus 842 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------- 882 (1031)
+|.++.+..... ......++.+++..++.||...
T Consensus 103 ~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 103 PGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp CSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred CCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 998876654322 1234456677777777777420
Q ss_pred ----------------CCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 883 ----------------LPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 883 ----------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
.+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999877778999998764
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.18 E-value=7.1e-06 Score=89.53 Aligned_cols=137 Identities=18% Similarity=0.163 Sum_probs=93.9
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCC---ceeeeeeeEe-cCCeeEEEEE
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR---NIIKFHGFCS-NAQHSFIVSE 839 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e 839 (1031)
.+.++.|....||+. ++.++||+.... .....+.+|..+++.+.+. .+.+.+.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~------~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ------QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH------HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc------hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456888999999998 567888885322 2356788999999988642 3566777764 4566789999
Q ss_pred eccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhC--------------------------------------
Q 043316 840 YLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHD-------------------------------------- 881 (1031)
Q Consensus 840 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------- 881 (1031)
|++|..+.+..-. .++..+...++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9999888653111 123334444455555555444432
Q ss_pred -------------------CCCCeeeCCCCCCCeeeCC---CCc-eEEecccccccc
Q 043316 882 -------------------CLPPIVHGDISSKNVLLDS---EHE-AHVSDFGIAKFL 915 (1031)
Q Consensus 882 -------------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~Dfg~a~~~ 915 (1031)
..+.++|+|++|.||+++. ++. +.|+||+.+..-
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235799999999999997 455 489999988754
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.12 E-value=7.3e-06 Score=88.30 Aligned_cols=77 Identities=19% Similarity=0.242 Sum_probs=60.3
Q ss_pred CccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCC---ceeeeeeeEecCCeeEEEE
Q 043316 762 GEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR---NIIKFHGFCSNAQHSFIVS 838 (1031)
Q Consensus 762 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~l~~~~~~~~~~~lv~ 838 (1031)
...+.++.|.++.||++...+|+.++||+..... ......|.+|++.++.+.+. .+++++++. ..++||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~----~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCC----cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 3456799999999999988889999999964321 12245688999999999764 577888764 368999
Q ss_pred EeccCCCc
Q 043316 839 EYLDRGSL 846 (1031)
Q Consensus 839 e~~~~gsL 846 (1031)
||++++++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99999875
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.11 E-value=1.2e-05 Score=89.84 Aligned_cols=146 Identities=14% Similarity=0.228 Sum_probs=91.6
Q ss_pred cCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCC--ceeeeeeeEecC-CeeEEE
Q 043316 761 FGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHR--NIIKFHGFCSNA-QHSFIV 837 (1031)
Q Consensus 761 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~--niv~l~~~~~~~-~~~~lv 837 (1031)
....+.++.|....+|+... +++.+++|+.... ..+.+|..+++.+... .+.++++++.+. +..|+|
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA---------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC---------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch---------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 34456789999999999976 6889999986432 2467888888877543 356777777664 678999
Q ss_pred EEeccCCCchhhc------------------ccCCcc-----c---------cCCHHHH---------------------
Q 043316 838 SEYLDRGSLTTIL------------------KDDAAA-----K---------EFGWNQR--------------------- 864 (1031)
Q Consensus 838 ~e~~~~gsL~~~l------------------~~~~~~-----~---------~l~~~~~--------------------- 864 (1031)
|||++|.++.+.- +..... . .-+|.+.
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999987664320 000000 0 0001111
Q ss_pred HHHHHHHHHHHHHhhhC-CCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 865 MNVIKGVANALSYLHHD-CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 865 ~~i~~~i~~~L~~LH~~-~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
......+....+++... ..+.++|+|++|.||+++.++.+.|+||+.+..-+
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 01111222222333221 01468999999999999877778899999987643
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.80 E-value=9.5e-05 Score=82.53 Aligned_cols=84 Identities=4% Similarity=-0.021 Sum_probs=55.9
Q ss_pred ccee-ecCCCccEEEEEeC-------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-C--CceeeeeeeEecC-
Q 043316 764 KYCI-GKGRQGSVYKAELP-------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-H--RNIIKFHGFCSNA- 831 (1031)
Q Consensus 764 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h--~niv~l~~~~~~~- 831 (1031)
.+.| +.|....+|+.... +++.+++|+........ ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~-~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP-VFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC-SSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc-cCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 3567 88889999998654 26789999865432000 001134567777777764 2 3577788887665
Q ss_pred --CeeEEEEEeccCCCchh
Q 043316 832 --QHSFIVSEYLDRGSLTT 848 (1031)
Q Consensus 832 --~~~~lv~e~~~~gsL~~ 848 (1031)
+..++||||++|..+.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 46789999999887764
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.67 E-value=0.00014 Score=80.54 Aligned_cols=141 Identities=18% Similarity=0.264 Sum_probs=78.4
Q ss_pred ceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcC-----CCCceeeee-e--eEecCCeeEE
Q 043316 765 YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEI-----RHRNIIKFH-G--FCSNAQHSFI 836 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~niv~l~-~--~~~~~~~~~l 836 (1031)
+.++.|..+.||++...+| .+++|+..... ..+..|+.+++.+ ..|.++... | +....+..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~--------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE--------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH--------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH--------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 4466678899999987555 58999986521 1222333433333 234444311 1 2235677899
Q ss_pred EEEeccCCCchh-----------h---cccC---C--cc------ccCCHHHH---------------------------
Q 043316 837 VSEYLDRGSLTT-----------I---LKDD---A--AA------KEFGWNQR--------------------------- 864 (1031)
Q Consensus 837 v~e~~~~gsL~~-----------~---l~~~---~--~~------~~l~~~~~--------------------------- 864 (1031)
||||++|..+.. . ++.. . +. ....|...
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 999999875530 0 0100 0 00 00122111
Q ss_pred ----HHHHHHHHHHHHHhhh----------CCCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 865 ----MNVIKGVANALSYLHH----------DCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 865 ----~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
..+...+..++++|++ .....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1112234445666653 0234899999999999998888999999998763
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.67 E-value=7.4e-05 Score=84.81 Aligned_cols=79 Identities=15% Similarity=-0.000 Sum_probs=49.4
Q ss_pred cceeecCCCccEEEEEeC-CCcEEEEEEccchhh--hhh-hhcHHHHHHHHHHHhcCCC--C-ceeeeeeeEecCCeeEE
Q 043316 764 KYCIGKGRQGSVYKAELP-SGIIFAVKKFNSQLL--FDE-MADQDEFLNEVLALTEIRH--R-NIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~-~~~~~~~~~Ei~~l~~l~h--~-niv~l~~~~~~~~~~~l 836 (1031)
.+.+|.|..+.||++... +++.++||....... ..+ ....+.+.+|.++++.+.. | .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999654 568899998653211 000 1123456778888877632 3 34456554 3445689
Q ss_pred EEEeccCC
Q 043316 837 VSEYLDRG 844 (1031)
Q Consensus 837 v~e~~~~g 844 (1031)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.63 E-value=1.4e-05 Score=77.86 Aligned_cols=83 Identities=18% Similarity=0.214 Sum_probs=43.8
Q ss_pred CCCcEEEeeCCcccCCChhhhhccccCceeeccccc-ccCCCccccccc----CccceeecCcCc-CCCCCcccccCCCc
Q 043316 485 SKLQVLDLSSNHIVGKIPVQFEKLFSLNKLILNLNQ-LSGGVPLEFGSL----TELQYLDLSANK-LSSSIPKSMGNLSK 558 (1031)
Q Consensus 485 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 558 (1031)
.+|+.||++++.|+...-..+.++++|+.|+|++|. +++..-..+..+ ++|++|+|++|. +++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467888888887765444445555666666666653 443322333332 245555555542 44333333444555
Q ss_pred cceecccCc
Q 043316 559 LHYLNLSNN 567 (1031)
Q Consensus 559 L~~L~Ls~N 567 (1031)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.60 E-value=0.00037 Score=75.58 Aligned_cols=76 Identities=18% Similarity=0.150 Sum_probs=60.6
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC---CCceeeeeeeEecCCeeEEEEE
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR---HRNIIKFHGFCSNAQHSFIVSE 839 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~~~~~~~~~~~lv~e 839 (1031)
..+.++.|....+|+... +++.++||+.... ....+.+|...++.+. ...++++++++...+..++|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence 345789999999999986 5778899986432 2556788888888773 3568889999888889999999
Q ss_pred eccCCCc
Q 043316 840 YLDRGSL 846 (1031)
Q Consensus 840 ~~~~gsL 846 (1031)
|+++..+
T Consensus 112 ~l~G~~~ 118 (312)
T 3jr1_A 112 ALNKSKN 118 (312)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9998765
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.57 E-value=3e-05 Score=75.67 Aligned_cols=83 Identities=16% Similarity=0.190 Sum_probs=52.2
Q ss_pred ccceEEccccccCCCccccccCCCCCceEeccCcc-cCCcCchhccCC----ccccceecccc-ccccccccccCCCCCC
Q 043316 366 SLSKLELCRNHLSGVIPHSIGNLTKLVLVNMCENH-LFGLIPKSFRNL----TSLERLRFNQN-NLFGKVYEAFGDHPNL 439 (1031)
Q Consensus 366 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~L 439 (1031)
+|+.||++++.++..--..+.++++|+.|+|++|. ++...-..+..+ ++|++|+|++| +|+......+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 46666666666554444455566666666666663 554444445543 35777777776 3666666666777788
Q ss_pred Ceecccccc
Q 043316 440 TFLDLSQNN 448 (1031)
Q Consensus 440 ~~L~Ls~N~ 448 (1031)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 888887764
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.33 E-value=0.00062 Score=77.70 Aligned_cols=76 Identities=14% Similarity=0.175 Sum_probs=47.3
Q ss_pred CCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCceeecc--ccCcccccccccc---CCCccccchhhhHHHHHH
Q 043316 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAG--TFGYAAPEIAHMM---RATEKYDVHSFGVLALEV 958 (1031)
Q Consensus 884 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~sDvwslG~il~el 958 (1031)
+.++|||++|.||+++.++ ++++||+.+..-++. ........ ...|++|+..... ......++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3789999999999998776 999999988754321 11111111 2346666654311 112234555777788877
Q ss_pred HhC
Q 043316 959 IKG 961 (1031)
Q Consensus 959 ltG 961 (1031)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.20 E-value=9.2e-05 Score=73.61 Aligned_cols=110 Identities=12% Similarity=0.122 Sum_probs=56.8
Q ss_pred CCCCcEEEeeCC-cccCC----ChhhhhccccCceeecccccccCCC----cccccccCccceeecCcCcCCCC----Cc
Q 043316 484 SSKLQVLDLSSN-HIVGK----IPVQFEKLFSLNKLILNLNQLSGGV----PLEFGSLTELQYLDLSANKLSSS----IP 550 (1031)
Q Consensus 484 l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~p 550 (1031)
-+.|++|+|++| +|... +...+..-+.|+.|+|++|+|.+.. ...+..-+.|++|+|+.|.|++. +.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 345667777664 55421 2233444456666666666665322 22333445666666666666532 22
Q ss_pred ccccCCCccceecccCc---ccCC----CCchhhccccccCceeccCccc
Q 043316 551 KSMGNLSKLHYLNLSNN---QFNH----KIPTEFEKLIHLSELDLSHNFL 593 (1031)
Q Consensus 551 ~~~~~l~~L~~L~Ls~N---~l~~----~~~~~~~~l~~L~~L~Ls~N~l 593 (1031)
+++..-+.|++|+|++| .+.. .+.+.+..-+.|+.|+++.|.+
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 33444455666666644 2221 1233445555666666665554
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.20 E-value=4.1e-05 Score=76.15 Aligned_cols=89 Identities=21% Similarity=0.265 Sum_probs=47.8
Q ss_pred cccCCCccceecccCcccCCC----CchhhccccccCceeccCcccCCc----CCccccCcccchhhhcCCC---ccCCC
Q 043316 552 SMGNLSKLHYLNLSNNQFNHK----IPTEFEKLIHLSELDLSHNFLQGE----IPPQICNMESLEELNLSHN---NLFDL 620 (1031)
Q Consensus 552 ~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N---~l~~~ 620 (1031)
.+..-+.|++|+|++|+|... +.+.+..-+.|+.|+|++|+|.+. +-..+..-..|++|+|++| .+...
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 334445555555555555422 334445556666666666666532 2233444556777777654 33321
Q ss_pred ----CccccccCCcceEEeccccc
Q 043316 621 ----IPGCFEEMRSLSRIDIAYNE 640 (1031)
Q Consensus 621 ----~~~~~~~l~~L~~L~l~~N~ 640 (1031)
+...+..-+.|+.|+++.|.
T Consensus 145 g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 145 VEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHHhCCCcCeEeccCCC
Confidence 22345556777888776653
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.16 E-value=0.00075 Score=72.62 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=56.2
Q ss_pred ccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-C--CceeeeeeeEecCCeeEE
Q 043316 760 DFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-H--RNIIKFHGFCSNAQHSFI 836 (1031)
Q Consensus 760 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h--~niv~l~~~~~~~~~~~l 836 (1031)
+....+.+|.|..+.||+.+..+|+.|+||+..... ......|.+|...++.+. . --+.+++++. ..++
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~----~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC----cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 445567899999999999999999999999865432 122345778988888774 2 2345555542 2479
Q ss_pred EEEeccCCCc
Q 043316 837 VSEYLDRGSL 846 (1031)
Q Consensus 837 v~e~~~~gsL 846 (1031)
||||++++..
T Consensus 88 v~e~l~~~~~ 97 (288)
T 3f7w_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEeecccCC
Confidence 9999987644
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.16 E-value=0.0039 Score=68.30 Aligned_cols=158 Identities=15% Similarity=0.185 Sum_probs=89.0
Q ss_pred ccHHHHHHHHhccCc-----cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-C-Cce
Q 043316 749 FLYEEIIKAIDDFGE-----KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-H-RNI 821 (1031)
Q Consensus 749 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h-~ni 821 (1031)
...+++......|.. .+.++ |....||++...+|+.+++|+..... ...+.+..|..+++.+. + -.+
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-----~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-----CCHHHHHHHHHHHHHHHHcCCee
Confidence 445556666555643 24566 88889999987778889999986331 12345556777666653 1 124
Q ss_pred eeeeee-----EecCCeeEEEEEeccCCCchh-----h---------cc----cCCc--cccCCHHHH----HHH-----
Q 043316 822 IKFHGF-----CSNAQHSFIVSEYLDRGSLTT-----I---------LK----DDAA--AKEFGWNQR----MNV----- 867 (1031)
Q Consensus 822 v~l~~~-----~~~~~~~~lv~e~~~~gsL~~-----~---------l~----~~~~--~~~l~~~~~----~~i----- 867 (1031)
++++.. ....+..+++|||++|..+.. + ++ .... ....++... ..+
T Consensus 85 p~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred cceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 444443 223556789999998865431 0 00 0000 011121111 001
Q ss_pred ----------HHHHHHHHHHhhhC----CCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 868 ----------IKGVANALSYLHHD----CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 868 ----------~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
...+...++.+.+. ....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111222333221 223678999999999998 5 899999988764
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.13 E-value=0.0025 Score=69.62 Aligned_cols=159 Identities=11% Similarity=0.139 Sum_probs=86.5
Q ss_pred ccHHHHHHHHhccCcc-----ceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-C-Cce
Q 043316 749 FLYEEIIKAIDDFGEK-----YCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-H-RNI 821 (1031)
Q Consensus 749 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h-~ni 821 (1031)
+..+++.....+|... +.++.|....+|++...++ .+++|+..... ..+.+..|+.+++.+. + -.+
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCC
Confidence 4456666666667652 3466788899999987555 68899876521 1123345555555442 1 113
Q ss_pred eeeeee------EecCCeeEEEEEeccCCCchhh--------------ccc---C-Ccc--cc---CCHHHHHH------
Q 043316 822 IKFHGF------CSNAQHSFIVSEYLDRGSLTTI--------------LKD---D-AAA--KE---FGWNQRMN------ 866 (1031)
Q Consensus 822 v~l~~~------~~~~~~~~lv~e~~~~gsL~~~--------------l~~---~-~~~--~~---l~~~~~~~------ 866 (1031)
.+++.. ....+..+++++|++|..+... ++. . ... .. ..|.....
T Consensus 80 P~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 159 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 159 (322)
T ss_dssp CCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred CcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHH
Confidence 333321 2234667899999998654220 010 0 000 00 01221100
Q ss_pred ------HHHHHHHHHHHhhhC----CCCCeeeCCCCCCCeeeCCCCceEEeccccccc
Q 043316 867 ------VIKGVANALSYLHHD----CLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 867 ------i~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+...+...++++++. ...+++|+|+++.||+++.++.+.|+||+.+..
T Consensus 160 ~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 160 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 001234445555432 134789999999999998776668999987763
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.03 E-value=0.00047 Score=64.05 Aligned_cols=57 Identities=25% Similarity=0.324 Sum_probs=44.6
Q ss_pred ceeccCcccC-CcCCccccCcccchhhhcCCCccCCCCccccccCCcceEEecccccccC
Q 043316 585 ELDLSHNFLQ-GEIPPQICNMESLEELNLSHNNLFDLIPGCFEEMRSLSRIDIAYNELQG 643 (1031)
Q Consensus 585 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 643 (1031)
.++.+++.++ ..+|..+. .+|+.|+|++|+|+.+.++.|..+++|++|+|++|+|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 5777777775 35565443 368888899999988888888889999999999998875
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.99 E-value=0.0018 Score=72.18 Aligned_cols=142 Identities=18% Similarity=0.266 Sum_probs=84.2
Q ss_pred cceeecCCCccEEEEEeC--------CCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 764 KYCIGKGRQGSVYKAELP--------SGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
.+.+..|....+|++... +++.+++|+.... ........+|..+++.+. +.-..++++++.+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~---- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE---- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----
Confidence 346778889999999764 3578999986332 123556668988887774 3334677776654
Q ss_pred EEEEEeccCCCchhh-c----------------ccCC-c-cccCC--HHHHHHHHHHHHH-------------------H
Q 043316 835 FIVSEYLDRGSLTTI-L----------------KDDA-A-AKEFG--WNQRMNVIKGVAN-------------------A 874 (1031)
Q Consensus 835 ~lv~e~~~~gsL~~~-l----------------~~~~-~-~~~l~--~~~~~~i~~~i~~-------------------~ 874 (1031)
.+|+||++|.++..- + +... . ..... +.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 299999998665321 1 0110 0 11122 3455555544322 1
Q ss_pred HHHh----hhC-CCCCeeeCCCCCCCeeeCCC----CceEEeccccccc
Q 043316 875 LSYL----HHD-CLPPIVHGDISSKNVLLDSE----HEAHVSDFGIAKF 914 (1031)
Q Consensus 875 L~~L----H~~-~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~ 914 (1031)
+++| ... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2232 221 22357899999999999876 7899999998864
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.92 E-value=0.0018 Score=71.27 Aligned_cols=32 Identities=34% Similarity=0.337 Sum_probs=27.9
Q ss_pred CCeeeCCCCCCCeeeCCC----CceEEecccccccc
Q 043316 884 PPIVHGDISSKNVLLDSE----HEAHVSDFGIAKFL 915 (1031)
Q Consensus 884 ~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~ 915 (1031)
..++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 478999999999999875 67999999998754
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.80 E-value=0.0023 Score=72.91 Aligned_cols=73 Identities=15% Similarity=0.156 Sum_probs=49.3
Q ss_pred cceeecCCCccEEEEEeCC--------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 764 KYCIGKGRQGSVYKAELPS--------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
.+.|+.|....||++...+ ++.+++|+..... ..+.+.+|..+++.+. +.-..++++.+.+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~------~~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE------TESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC------CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC------cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 3568889999999997653 5789999874311 1134457888877774 3234667776543
Q ss_pred EEEEEeccCCCc
Q 043316 835 FIVSEYLDRGSL 846 (1031)
Q Consensus 835 ~lv~e~~~~gsL 846 (1031)
.+|+||++|.++
T Consensus 148 g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 GRLEEYIPSRPL 159 (429)
T ss_dssp EEEECCCCEEEC
T ss_pred CEEEEEeCCccc
Confidence 389999987554
No 439
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.77 E-value=0.0025 Score=69.02 Aligned_cols=71 Identities=14% Similarity=0.074 Sum_probs=43.1
Q ss_pred cceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCeeEEEEEec-
Q 043316 764 KYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHSFIVSEYL- 841 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~- 841 (1031)
.+.++.|....+|++ +.+++|+..... ... ....+|+.+++.+. +.-..++++++. +.-++|+||+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~--~~~---~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGT--EEY---INRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------C---CCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCc--cce---eCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecC
Confidence 677999999999999 568888875431 111 11235666666553 211245555443 3346899999
Q ss_pred cCCCc
Q 043316 842 DRGSL 846 (1031)
Q Consensus 842 ~~gsL 846 (1031)
++.++
T Consensus 91 ~g~~l 95 (301)
T 3dxq_A 91 GAQTM 95 (301)
T ss_dssp TCEEC
T ss_pred CCccC
Confidence 66555
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.53 E-value=0.0027 Score=58.92 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=38.6
Q ss_pred eeecCcCcCC-CCCcccccCCCccceecccCcccCCCCchhhccccccCceeccCcccC
Q 043316 537 YLDLSANKLS-SSIPKSMGNLSKLHYLNLSNNQFNHKIPTEFEKLIHLSELDLSHNFLQ 594 (1031)
Q Consensus 537 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 594 (1031)
.++.+++.|+ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6677777775 24554443 45777777777777766777777777777777777665
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.22 E-value=0.006 Score=68.08 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=43.0
Q ss_pred cceeecCCCccEEEEEeCC---------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCe
Q 043316 764 KYCIGKGRQGSVYKAELPS---------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQH 833 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~ 833 (1031)
.+.++.|....+|++...+ ++.+++|+..... ... ....+|..+++.+. +.-+.++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~~---~~~~~E~~~l~~L~~~g~~P~~~~~~--~-- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DEL---YNTISEFEVYKTMSKYKIAPQLLNTF--N-- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GGT---SCHHHHHHHHHHHHHTTSSCCEEEEE--T--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cce---ecHHHHHHHHHHHHhcCCCCceEEec--C--
Confidence 3467888889999997644 2688898875432 111 12346777766664 22244666554 2
Q ss_pred eEEEEEeccCCCc
Q 043316 834 SFIVSEYLDRGSL 846 (1031)
Q Consensus 834 ~~lv~e~~~~gsL 846 (1031)
-++||||++|..+
T Consensus 109 ~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 GGRIEEWLYGDPL 121 (369)
T ss_dssp TEEEEECCCSEEC
T ss_pred CcEEEEEecCCcC
Confidence 2689999988654
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.16 E-value=0.012 Score=67.37 Aligned_cols=74 Identities=18% Similarity=0.161 Sum_probs=47.2
Q ss_pred cceeecCCCccEEEEEeCC-CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCc-eeeeeeeEecCCeeEEEEEec
Q 043316 764 KYCIGKGRQGSVYKAELPS-GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRN-IIKFHGFCSNAQHSFIVSEYL 841 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~ 841 (1031)
.+.|+.|....+|++...+ ++.+++|+..... ....+ -.+|..+++.+...+ ..++++++. + ..|+||+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~id---R~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I 183 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIIN---REREKKISCILYNKNIAKKIYVFFT-N---GRIEEFM 183 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSC---HHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcC---HHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEee
Confidence 3568889999999998755 5788899874421 11111 247888887775333 457777763 2 2599999
Q ss_pred cCCCc
Q 043316 842 DRGSL 846 (1031)
Q Consensus 842 ~~gsL 846 (1031)
+|.++
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 98655
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.15 E-value=0.018 Score=63.23 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=28.2
Q ss_pred CCeeeCCCCCCCeeeCCCCceEEecccccccc
Q 043316 884 PPIVHGDISSKNVLLDSEHEAHVSDFGIAKFL 915 (1031)
Q Consensus 884 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 915 (1031)
..++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 46899999999999998888999999887653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.51 E-value=0.027 Score=62.83 Aligned_cols=146 Identities=18% Similarity=0.237 Sum_probs=83.3
Q ss_pred ceeecCCCccEEEEEeCC--------CcEEEEEEccchhhh-------hhhhc-------HHHHHHHHHHHhcCC-CCce
Q 043316 765 YCIGKGRQGSVYKAELPS--------GIIFAVKKFNSQLLF-------DEMAD-------QDEFLNEVLALTEIR-HRNI 821 (1031)
Q Consensus 765 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-------~~~~~-------~~~~~~Ei~~l~~l~-h~ni 821 (1031)
+.+..|-...+|++..++ .+.|.+++....... ....+ .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 457778888999997654 378888886442100 00011 122335888877774 4446
Q ss_pred eeeeeeEecCCeeEEEEEeccCCCchhh-cc----------------cC--CccccCC--HHHHHHHHHHHH--------
Q 043316 822 IKFHGFCSNAQHSFIVSEYLDRGSLTTI-LK----------------DD--AAAKEFG--WNQRMNVIKGVA-------- 872 (1031)
Q Consensus 822 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~----------------~~--~~~~~l~--~~~~~~i~~~i~-------- 872 (1031)
.++++++..+ +|+||++|-+|..- ++ .. ....... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6777776532 89999997655221 10 00 0011122 223333433321
Q ss_pred --------------HHH----HHhhhC-CCCCeeeCCCCCCCeeeCCC------CceEEeccccccc
Q 043316 873 --------------NAL----SYLHHD-CLPPIVHGDISSKNVLLDSE------HEAHVSDFGIAKF 914 (1031)
Q Consensus 873 --------------~~L----~~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~Dfg~a~~ 914 (1031)
.-+ +++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 222221 22357899999999999877 7899999988763
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.42 E-value=0.063 Score=53.48 Aligned_cols=100 Identities=15% Similarity=0.084 Sum_probs=65.0
Q ss_pred CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccCCCCCCce
Q 043316 844 GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLNPHSSNWT 923 (1031)
Q Consensus 844 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 923 (1031)
-+|.+.|+... .+++++++|.++.|.+.+|.-.-... .-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc----------
Confidence 37888887653 47999999999999999987762210 111333457899999999988874 1111
Q ss_pred eeccccCccccccccccCCCccccchhhhHHHHHHHhC
Q 043316 924 AFAGTFGYAAPEIAHMMRATEKYDVHSFGVLALEVIKG 961 (1031)
Q Consensus 924 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltG 961 (1031)
.....+.|||... ...+.+.=|||+|+++|.-+--
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence 1123466888753 2456778899999999998863
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.84 E-value=0.041 Score=62.00 Aligned_cols=74 Identities=8% Similarity=0.022 Sum_probs=47.6
Q ss_pred cceeecCCCccEEEEEeCC--------CcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCC-CCceeeeeeeEecCCee
Q 043316 764 KYCIGKGRQGSVYKAELPS--------GIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIR-HRNIIKFHGFCSNAQHS 834 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 834 (1031)
.+.+..|....+|++...+ ++.|++|+..... +. ..+..+|..+++.+. +.-..++++.+. -
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~---~idR~~E~~~l~~L~~~gi~P~l~~~~~----~ 145 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GK---FYDSKVELDVFRYLSNINIAPNIIADFP----E 145 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---C---CCCHHHHHHHHHHHHHTTSSCCEEEEET----T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--ch---hcCHHHHHHHHHHHHhcCCCCCEEEEcC----C
Confidence 3567788899999997653 6889999864421 11 112246777776664 333456665432 2
Q ss_pred EEEEEeccCCCc
Q 043316 835 FIVSEYLDRGSL 846 (1031)
Q Consensus 835 ~lv~e~~~~gsL 846 (1031)
+.|+||++|..+
T Consensus 146 ~~I~efI~G~~l 157 (424)
T 3mes_A 146 GRIEEFIDGEPL 157 (424)
T ss_dssp EEEEECCCSEEC
T ss_pred CEEEEEeCCccC
Confidence 789999998764
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=92.95 E-value=0.05 Score=38.69 Aligned_cols=29 Identities=21% Similarity=0.304 Sum_probs=15.6
Q ss_pred EEeehhHHHHHHHHHHHHHHHhhhccccc
Q 043316 687 VVIVFPILGMVVLLIGLFGFFLFFGQRKR 715 (1031)
Q Consensus 687 ~~ii~~i~g~~vll~~~~~~~~~~~~r~~ 715 (1031)
.++.+++.|+++++++++++++|+++|++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34555555566665555555555555444
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.27 E-value=0.046 Score=38.72 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=15.7
Q ss_pred EeehhHHHHHHHHHHHHHHHhhhccccch
Q 043316 688 VIVFPILGMVVLLIGLFGFFLFFGQRKRD 716 (1031)
Q Consensus 688 ~ii~~i~g~~vll~~~~~~~~~~~~r~~~ 716 (1031)
++.+++.|+++++++++.+++|+++|+++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 45555555666655555555555554443
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.62 E-value=0.14 Score=57.46 Aligned_cols=29 Identities=24% Similarity=0.501 Sum_probs=24.9
Q ss_pred eeeCCCCCCCeee------CCCCceEEeccccccc
Q 043316 886 IVHGDISSKNVLL------DSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 886 ivH~Dlkp~NIll------~~~~~~kl~Dfg~a~~ 914 (1031)
++|+|+.+.||++ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998864
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.66 E-value=0.24 Score=35.07 Aligned_cols=27 Identities=15% Similarity=0.403 Sum_probs=13.1
Q ss_pred eehhHHHHHHHHHHHHHHHhhhccccc
Q 043316 689 IVFPILGMVVLLIGLFGFFLFFGQRKR 715 (1031)
Q Consensus 689 ii~~i~g~~vll~~~~~~~~~~~~r~~ 715 (1031)
|++.++|+++++++.+++++|.++|+.
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 455555544444444444445544443
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.38 E-value=2.3 Score=42.28 Aligned_cols=115 Identities=10% Similarity=0.118 Sum_probs=79.2
Q ss_pred CCCceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhhhCCCCCeeeCCCCCCCe
Q 043316 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLHHDCLPPIVHGDISSKNV 896 (1031)
Q Consensus 817 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 896 (1031)
.||+.+.. .+-.+++.+.+.++.-+ +...|-. ....+...+++++.+|+...++++.. +|--++|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 68888866 56666676666665443 2333322 22367789999999999998777765 8889999999
Q ss_pred eeCCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccch-hhhHHHHHHHhCCCCCC
Q 043316 897 LLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVH-SFGVLALEVIKGNHPRD 966 (1031)
Q Consensus 897 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw-slG~il~elltG~~P~~ 966 (1031)
+++.++.+++.=.|.-..+.|.. +.+ -|.| .+=|++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l~P~~------------~~e-----------e~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVDPLP------------VSE-----------AEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTBSCCC------------CCH-----------HHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCCCCCC------------CCH-----------HHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999998777644332110 011 1222 56778999999988865
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.36 E-value=3.7 Score=40.94 Aligned_cols=114 Identities=10% Similarity=0.068 Sum_probs=77.3
Q ss_pred CCCceeeeeeeEecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHHHHHHH-HhhhCCCCCeeeCCCCCCC
Q 043316 817 RHRNIIKFHGFCSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGVANALS-YLHHDCLPPIVHGDISSKN 895 (1031)
Q Consensus 817 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlkp~N 895 (1031)
.||+. -..+-.+++.+.+.++.-+++.=...+ ...+..++++.+.+|+.... +++.. +|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57777 444557777777777755333222222 23677899999999999888 77655 788999999
Q ss_pred eeeCCCCceEEeccccccccCCCCCCceeeccccCccccccccccCCCccccch-hhhHHHHHHHhCCCCCC
Q 043316 896 VLLDSEHEAHVSDFGIAKFLNPHSSNWTAFAGTFGYAAPEIAHMMRATEKYDVH-SFGVLALEVIKGNHPRD 966 (1031)
Q Consensus 896 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw-slG~il~elltG~~P~~ 966 (1031)
|++|.++.+++.-.|.-..+ +|..+ ...|.| .+=|++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e~------~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDEW------DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCSC------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCCC------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999877754433 22211 112222 56678888888887754
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=70.76 E-value=2.1 Score=29.42 Aligned_cols=23 Identities=30% Similarity=0.480 Sum_probs=10.4
Q ss_pred eehhHHHHHHHHHHHHHHHhhhc
Q 043316 689 IVFPILGMVVLLIGLFGFFLFFG 711 (1031)
Q Consensus 689 ii~~i~g~~vll~~~~~~~~~~~ 711 (1031)
|+++++|+++.+++++++.+|++
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeehHHHHHHHHHHHHHHHHe
Confidence 45555555544443443333333
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=68.08 E-value=0.69 Score=52.79 Aligned_cols=61 Identities=7% Similarity=-0.027 Sum_probs=16.7
Q ss_pred cceeecCCCccEEEEEeCC-CcEEEE------EEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe
Q 043316 764 KYCIGKGRQGSVYKAELPS-GIIFAV------KKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS 829 (1031)
Q Consensus 764 ~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~ 829 (1031)
.+.+| ||.||+|.+.. ..+||| |..+..... .+....|.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~--~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS--EKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCcccccccccc--ccccccccccccccccccccccCCCcceEE
Confidence 34565 99999997643 367888 665543321 233557889999999999999999988764
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=64.68 E-value=2.8 Score=29.40 Aligned_cols=11 Identities=36% Similarity=0.350 Sum_probs=4.8
Q ss_pred EeehhHHHHHH
Q 043316 688 VIVFPILGMVV 698 (1031)
Q Consensus 688 ~ii~~i~g~~v 698 (1031)
++++++.|+++
T Consensus 15 I~~~vv~Gv~l 25 (41)
T 2k9y_A 15 VIGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 34444444444
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=51.20 E-value=2.9 Score=27.92 Aligned_cols=25 Identities=20% Similarity=0.422 Sum_probs=10.7
Q ss_pred eehhHHHHHHHHHHHHHHHhhhccc
Q 043316 689 IVFPILGMVVLLIGLFGFFLFFGQR 713 (1031)
Q Consensus 689 ii~~i~g~~vll~~~~~~~~~~~~r 713 (1031)
|++.++|+.+++++.+.+.+|.++|
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeec
Confidence 3444444333334333444444444
No 457
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=49.47 E-value=8.9 Score=28.51 Aligned_cols=17 Identities=35% Similarity=0.548 Sum_probs=7.8
Q ss_pred eEEeehhHHHHHHHHHH
Q 043316 686 WVVIVFPILGMVVLLIG 702 (1031)
Q Consensus 686 ~~~ii~~i~g~~vll~~ 702 (1031)
|++++++++|+.++.++
T Consensus 13 wiIi~svl~GLllL~li 29 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTIL 29 (54)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444444433
No 458
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=47.64 E-value=5.5 Score=25.96 Aligned_cols=24 Identities=38% Similarity=0.642 Sum_probs=14.9
Q ss_pred ehhHHHHHHHHHHHHHHHhhhccc
Q 043316 690 VFPILGMVVLLIGLFGFFLFFGQR 713 (1031)
Q Consensus 690 i~~i~g~~vll~~~~~~~~~~~~r 713 (1031)
...++|+++++.++...+++|+-|
T Consensus 10 lt~i~gl~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 10 LTVIAGLVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCceeEEEccc
Confidence 345667777777666666665544
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=47.41 E-value=24 Score=30.26 Aligned_cols=45 Identities=18% Similarity=0.134 Sum_probs=25.9
Q ss_pred cCCcCchhccCCccccceeccccccccccccccCCCCCCCeecccc
Q 043316 401 LFGLIPKSFRNLTSLERLRFNQNNLFGKVYEAFGDHPNLTFLDLSQ 446 (1031)
Q Consensus 401 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 446 (1031)
++.+....|.++.+|+.+.+-. .++.+...+|..+.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~-~v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQP-NIGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECT-TSSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCC-chheEcHHHHhccCCccEEEEcC
Confidence 4444455566666666666553 35555666666666666666654
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=46.85 E-value=30 Score=29.59 Aligned_cols=47 Identities=19% Similarity=0.157 Sum_probs=29.0
Q ss_pred ccCCCccccccCCCCCceEeccCcccCCcCchhccCCccccceecccc
Q 043316 376 HLSGVIPHSIGNLTKLVLVNMCENHLFGLIPKSFRNLTSLERLRFNQN 423 (1031)
Q Consensus 376 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 423 (1031)
.++.+-..+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344444556666666666666543 45556667777777777777654
No 461
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=46.06 E-value=17 Score=28.15 Aligned_cols=10 Identities=10% Similarity=0.531 Sum_probs=3.9
Q ss_pred HHHHhhhccc
Q 043316 704 FGFFLFFGQR 713 (1031)
Q Consensus 704 ~~~~~~~~~r 713 (1031)
.+.|.|.+.+
T Consensus 32 ~gcwcylrlq 41 (90)
T 1zza_A 32 LGCWCYLRLQ 41 (90)
T ss_dssp HHHHTTTSSC
T ss_pred HHHHHHHHHH
Confidence 3334333333
No 462
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=45.06 E-value=3.8e+02 Score=30.23 Aligned_cols=155 Identities=16% Similarity=0.171 Sum_probs=101.7
Q ss_pred HHHHHHHHhccCccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeeeEe-
Q 043316 751 YEEIIKAIDDFGEKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGFCS- 829 (1031)
Q Consensus 751 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~- 829 (1031)
|++...-...=...-.+..|--|.|-.+..-.+-+++.|+|+..-......+.+..++-.+..+ +|..+-++-+..+
T Consensus 298 YR~~l~hl~~s~D~Fi~APGikGmVM~VFTLPSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Ef 375 (578)
T 3eps_A 298 YREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEF 375 (578)
T ss_dssp HHHHHHHHHTCCCCBEECSSCCCSSEEEEECTTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEE
T ss_pred HHHHHHHhccCchhEEECCCCCceEEEEEcCCCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhh
Confidence 4444443333333446789999999999655777899999987644334445555555555544 3555555544221
Q ss_pred ----------------------------cCCeeEEEEEeccC--CCchhhcccCCccccCCHHHHHHHHHHHHHHHHHhh
Q 043316 830 ----------------------------NAQHSFIVSEYLDR--GSLTTILKDDAAAKEFGWNQRMNVIKGVANALSYLH 879 (1031)
Q Consensus 830 ----------------------------~~~~~~lv~e~~~~--gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH 879 (1031)
+++.+.|-.=|++. ..|.=|++. -+..++...+.+--.|+.-|-
T Consensus 376 sn~~fp~~Rfs~eLL~EL~~~~ps~le~~gd~liIkHlYiERRMtPLNLYL~~------a~~~~~~~av~eYG~AIKqLA 449 (578)
T 3eps_A 376 ENFVLEKRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQ------VEGQQLRDAIEEYGNAIRQLA 449 (578)
T ss_dssp EEEEEEGGGBCHHHHHHHHHHSGGGEEEETTEEEEEEEEEEECCEEHHHHHHH------CCTHHHHHHHHHHHHHHHHHH
T ss_pred hcccCchhhCCHHHHHHHHHhCCccEEEcCCeeEeeeeeeeccccchhHHHhh------CCHHHHHHHHHHHHHHHHHHH
Confidence 12222221122221 133334433 244678888889999999999
Q ss_pred hCCCCCeeeCCCCCCCeeeCCCCceEEeccccccccC
Q 043316 880 HDCLPPIVHGDISSKNVLLDSEHEAHVSDFGIAKFLN 916 (1031)
Q Consensus 880 ~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 916 (1031)
.. +|.-||.=.+|.=|+..|.|..-|+.-.+.+.
T Consensus 450 aA---NIFPGDML~KNFGVTRhgRVVFYDYDEI~ylT 483 (578)
T 3eps_A 450 AA---NIFPGDMLFKNFGVTRHGRVVFYDYDEICYMT 483 (578)
T ss_dssp HT---TEECSCCCGGGEEECTTCCEEECCGGGCEEST
T ss_pred Hh---cCCCcccccccCCccccceEEEecccceeeec
Confidence 99 99999999999999999999999998777664
No 463
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=44.47 E-value=8.6 Score=28.50 Aligned_cols=17 Identities=24% Similarity=0.800 Sum_probs=8.3
Q ss_pred eEEeehhHHHHHHHHHH
Q 043316 686 WVVIVFPILGMVVLLIG 702 (1031)
Q Consensus 686 ~~~ii~~i~g~~vll~~ 702 (1031)
|++++++++|+.++.++
T Consensus 10 WiIi~svl~GLLLL~Li 26 (54)
T 2l8s_A 10 WVILLSAFAGLLLLMLL 26 (54)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555555554444443
No 464
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=38.51 E-value=14 Score=25.94 Aligned_cols=16 Identities=38% Similarity=0.673 Sum_probs=7.3
Q ss_pred eEEeehhHHHHHHHHH
Q 043316 686 WVVIVFPILGMVVLLI 701 (1031)
Q Consensus 686 ~~~ii~~i~g~~vll~ 701 (1031)
|++++++++|..++.+
T Consensus 11 wiIi~s~l~GLllL~l 26 (42)
T 2k1a_A 11 WWVLVGVLGGLLLLTI 26 (42)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444444444444433
No 465
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=33.09 E-value=23 Score=25.16 Aligned_cols=20 Identities=15% Similarity=-0.185 Sum_probs=9.5
Q ss_pred HHHHHHHHhhhccccchhhh
Q 043316 700 LIGLFGFFLFFGQRKRDSQE 719 (1031)
Q Consensus 700 l~~~~~~~~~~~~r~~~~~~ 719 (1031)
++++++++.++...+|++++
T Consensus 22 ~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 22 LLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHhhhhHhh
Confidence 33334444555555555443
No 466
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=32.79 E-value=30 Score=24.56 Aligned_cols=22 Identities=23% Similarity=0.147 Sum_probs=12.2
Q ss_pred HHHHHHHHhhhccccchhhhcc
Q 043316 700 LIGLFGFFLFFGQRKRDSQEKR 721 (1031)
Q Consensus 700 l~~~~~~~~~~~~r~~~~~~~~ 721 (1031)
+++++++..++...+|++++++
T Consensus 21 ~~v~ii~~~~~~~~RRRr~~~k 42 (44)
T 2l2t_A 21 FILVIVGLTFAVYVRRKSIKKK 42 (44)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCC
T ss_pred HHHHHHHHHHHHHhhhhhhhhc
Confidence 4444455566666666665543
No 467
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=32.69 E-value=2.9e+02 Score=31.99 Aligned_cols=26 Identities=31% Similarity=0.321 Sum_probs=23.4
Q ss_pred CCCCCCCeeeCCCCceEEeccccccc
Q 043316 889 GDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 889 ~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+|=+++|||++.+|++.=+|||.+.-
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~f~ 502 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYILG 502 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSCTT
T ss_pred cCCCCcceeEcCCCCEeeeehHHhhc
Confidence 57789999999999999999998853
No 468
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=26.63 E-value=3.5e+02 Score=28.59 Aligned_cols=138 Identities=14% Similarity=0.141 Sum_probs=73.2
Q ss_pred ccceeecCCCccEEEEEeCCCcEEEEEEccchhhhhhhhcHHHHHHHHHHHhcCCCCceeeeeee---------------
Q 043316 763 EKYCIGKGRQGSVYKAELPSGIIFAVKKFNSQLLFDEMADQDEFLNEVLALTEIRHRNIIKFHGF--------------- 827 (1031)
Q Consensus 763 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~--------------- 827 (1031)
.++..-.|. +.||.+.. ++..|+||-.. . ...+-+..++...-.+.-|..--+.-.
T Consensus 73 ~I~~s~~Gs-tgvff~~t-d~~~~VVK~s~--~-----l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~ 143 (342)
T 1cja_A 73 GIERSEKGT-EGLFFVET-ESGVFIVKRST--N-----IESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAID 143 (342)
T ss_dssp EEEECCSTT-SCEEEEEE-SSCEEEEECCT--T-----HHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHC
T ss_pred EEEeccCCC-CCeEEEEe-CCCEEEEeCcH--H-----HHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhh
Confidence 334445554 56666654 68899999442 1 123445555555555665552211110
Q ss_pred -------EecCCeeEEEEEeccCCCchhhcccCCccccCCHHHHHHHHHHH--HHHHHHhhhCCCC-Cee-eCCCCCCCe
Q 043316 828 -------CSNAQHSFIVSEYLDRGSLTTILKDDAAAKEFGWNQRMNVIKGV--ANALSYLHHDCLP-PIV-HGDISSKNV 896 (1031)
Q Consensus 828 -------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i--~~~L~~LH~~~~~-~iv-H~Dlkp~NI 896 (1031)
....+..+++|||.+|..|...-.... ...+.. +.+.++ +-+++++..+.++ ..+ +.-=.+.||
T Consensus 144 ~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~-~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NI 218 (342)
T 1cja_A 144 KSFRVITTLANQANILLMELVRGITLNKLTTTSA-PEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNI 218 (342)
T ss_dssp SSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSH-HHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGE
T ss_pred hhhHHHHHhhcccceehhhhcCCCccccchhhhh-hhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhhe
Confidence 011235679999999766654322210 011222 223333 3345555544332 111 123578999
Q ss_pred eeCCCCc-eEEeccccccc
Q 043316 897 LLDSEHE-AHVSDFGIAKF 914 (1031)
Q Consensus 897 ll~~~~~-~kl~Dfg~a~~ 914 (1031)
|++.++. +.++|-+.+..
T Consensus 219 L~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 219 MLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EEESBTTCEEECSCCCCCC
T ss_pred EEeCCCCeEEEEcCCcccc
Confidence 9987655 88999998864
No 469
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=21.61 E-value=58 Score=23.06 Aligned_cols=26 Identities=23% Similarity=0.074 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhh
Q 043316 694 LGMVVLLIGLFGFFLFFGQRKRDSQE 719 (1031)
Q Consensus 694 ~g~~vll~~~~~~~~~~~~r~~~~~~ 719 (1031)
.+++.+++++++.+.+....||++++
T Consensus 16 ~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 16 SAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHHHHhheehhhhh
Confidence 33334333333334445555555443
No 470
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=21.47 E-value=3e+02 Score=34.18 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=23.6
Q ss_pred CCCCCCCeeeCCCCceEEeccccccc
Q 043316 889 GDISSKNVLLDSEHEAHVSDFGIAKF 914 (1031)
Q Consensus 889 ~Dlkp~NIll~~~~~~kl~Dfg~a~~ 914 (1031)
+|=+++|||++.+|++.=+|||.+..
T Consensus 937 gDRH~~NILid~tG~v~HIDFG~~f~ 962 (1091)
T 3hhm_A 937 GDRHNSNIMVKDDGQLFHIDFGHFLD 962 (1091)
T ss_dssp CCCCTTTEEEETTSCEEECCCCCCSC
T ss_pred cCCCCcceEEeCCCCEEEEeehhhhc
Confidence 67789999999999999999999853
Done!