Query 043321
Match_columns 617
No_of_seqs 214 out of 1027
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 06:08:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043321.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043321hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ks8_A Endo-B-1,4-glucanase; c 100.0 2E-109 7E-114 905.3 30.4 421 117-586 2-430 (433)
2 2xfg_A Endoglucanase 1; hydrol 100.0 3E-108 9E-113 902.3 33.0 427 113-586 19-461 (466)
3 1ia6_A Cellulase CEL9M; cellul 100.0 2E-108 6E-113 899.5 30.5 415 116-586 2-428 (441)
4 1tf4_A T. fusca endo/EXO-cellu 100.0 1E-107 3E-112 923.3 33.1 425 116-586 2-442 (605)
5 2yik_A Endoglucanase; hydrolas 100.0 2E-108 8E-113 929.3 27.1 459 81-586 5-514 (611)
6 1g87_A Endocellulase 9G; endog 100.0 1E-105 3E-110 907.6 33.7 422 117-586 3-438 (614)
7 3gzk_A Cellulase; fold from GH 100.0 5E-101 2E-105 858.8 20.5 450 46-586 43-533 (537)
8 1clc_A Endoglucanase CELD; EC: 100.0 4E-100 1E-104 866.6 26.7 463 44-587 75-564 (639)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 2.1E-97 7E-102 841.0 24.9 492 46-586 43-606 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 9.4E-67 3.2E-71 582.3 19.5 448 45-583 42-563 (586)
11 2gz6_A N-acetyl-D-glucosamine 96.3 0.073 2.5E-06 55.9 16.0 149 183-356 52-201 (388)
12 3gt5_A N-acetylglucosamine 2-e 95.0 0.9 3.1E-05 48.2 18.2 131 205-356 69-202 (402)
13 3k7x_A LIN0763 protein; Q92DQ0 94.8 0.34 1.2E-05 50.8 14.1 68 265-356 51-121 (349)
14 2gz6_A N-acetyl-D-glucosamine 94.4 0.91 3.1E-05 47.4 16.3 87 259-356 52-144 (388)
15 1nc5_A Hypothetical protein YT 90.8 4.2 0.00014 42.6 15.3 72 262-356 43-116 (373)
16 1nc5_A Hypothetical protein YT 90.5 3.3 0.00011 43.4 14.2 63 285-356 107-172 (373)
17 3k7x_A LIN0763 protein; Q92DQ0 89.1 0.8 2.7E-05 48.0 7.9 126 205-356 109-242 (349)
18 2zzr_A Unsaturated glucuronyl 87.2 0.86 2.9E-05 48.8 6.8 130 206-355 132-274 (397)
19 3gt5_A N-acetylglucosamine 2-e 86.9 7.7 0.00026 40.9 14.1 173 166-355 153-338 (402)
20 3k11_A Putative glycosyl hydro 86.5 12 0.00041 40.6 15.3 160 207-388 30-215 (445)
21 3e6u_A LANC-like protein 1; al 84.9 8.6 0.00029 40.9 13.2 118 204-356 247-364 (411)
22 2ahf_A Unsaturated glucuronyl 84.6 0.99 3.4E-05 48.0 5.6 131 207-355 107-249 (377)
23 1fp3_A N-acyl-D-glucosamine 2- 82.6 11 0.00038 39.4 12.8 80 260-356 56-151 (402)
24 3pmm_A Putative cytoplasmic pr 81.6 18 0.00063 38.1 14.0 34 323-356 163-199 (382)
25 3pmm_A Putative cytoplasmic pr 81.2 14 0.00047 39.0 12.9 35 323-357 63-98 (382)
26 3k11_A Putative glycosyl hydro 80.5 18 0.00062 39.1 13.7 82 263-357 148-234 (445)
27 1fp3_A N-acyl-D-glucosamine 2- 78.8 5 0.00017 42.1 8.5 86 263-355 250-342 (402)
28 2zbl_A Putative isomerase; N-a 71.3 8.9 0.0003 40.7 8.1 77 259-355 50-138 (421)
29 1gxm_A Pectate lyase; mechanis 64.5 43 0.0015 34.8 11.2 80 206-299 92-180 (332)
30 2zbl_A Putative isomerase; N-a 63.6 8.9 0.00031 40.7 6.2 88 263-355 250-344 (421)
31 2g0d_A Nisin biosynthesis prot 48.5 59 0.002 33.9 9.4 116 205-354 224-352 (409)
32 1r76_A Pectate lyase; A-helica 43.1 94 0.0032 33.2 9.8 82 206-299 170-256 (408)
33 3e6u_A LANC-like protein 1; al 39.6 1.4E+02 0.0047 31.4 10.6 65 265-351 125-189 (411)
34 2v8i_A Pectate lyase; periplas 36.0 39 0.0013 36.8 5.4 25 332-356 431-455 (543)
35 2p0v_A Hypothetical protein BT 24.5 3E+02 0.01 30.1 10.0 103 188-299 187-318 (489)
36 1x9d_A Endoplasmic reticulum m 21.9 1.9E+02 0.0065 32.0 8.0 93 261-356 364-463 (538)
No 1
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=2e-109 Score=905.34 Aligned_cols=421 Identities=35% Similarity=0.618 Sum_probs=379.0
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchhHHHHHHHHHHHHh
Q 043321 117 TKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEY 196 (617)
Q Consensus 117 ~~~Y~~al~~sL~Ff~aQRsG~lp~~~~v~Wr~~s~l~Dg~~~g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~wa~~e~ 196 (617)
..+|.++|+++|+||++||||++|++++++||++|||.||.+.+. ||+|||||||||+||++|||+++++|+|+++||
T Consensus 2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~--Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~ 79 (433)
T 1ks8_A 2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQ--DLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDF 79 (433)
T ss_dssp CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCC--BCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcc--cCCCceeECCCCCeeccchHHHHHHHHHHHHHh
Confidence 368999999999999999999999999999999999999977654 999999999999999999999999999999999
Q ss_pred HHHHhhcCChhHHHHHHHHHHHHHHhhCCCCCCC---cc--CcccCCcCCCCCCCCCcceEecCC--CchhHHHHHHHHH
Q 043321 197 QEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDT---KV--SNDINCWQRPEDMSYVRPVSVCDS--TASDLAGEIIAAL 269 (617)
Q Consensus 197 ~~~~~~~~~~pdiLdEikWglD~Llkmgd~~~g~---~~--~~Dh~~W~~PEd~~~~R~v~~~s~--~gsdlaa~~AAAL 269 (617)
++.|+++|++||||||||||+||||||+++++.. +. ..||.||++||+|+.+|++|+++. +||++++++||||
T Consensus 80 ~~~~~~~~~~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAal 159 (433)
T 1ks8_A 80 EAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAAL 159 (433)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHH
T ss_pred HHhhhcCCchHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999999876521 11 368999999999999999999874 4899999999999
Q ss_pred HHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhCChhH
Q 043321 270 SAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSY 348 (617)
Q Consensus 270 AaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd~~Y 348 (617)
|+||||||+ |++||++||++||++|+||++ +|+.|. ++++...++|+|+++.||++|||+|||+||||++|
T Consensus 160 A~as~vfk~~D~~yA~~~L~~A~~~~~fa~~-----~~~~y~---~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Y 231 (433)
T 1ks8_A 160 AAASIVFRNVDGTYSNNLLTHARQLFDFANN-----YRGKYS---DSITDARNFYASADYRDELVWAAAWLYRATNDNTY 231 (433)
T ss_dssp HHHHHHTTTTCHHHHHHHHHHHHHHHHHHHH-----SCCCHH---HHSGGGGGTSCCCCTHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHhccccCHHHHHHHHHHHHHHHHHHHH-----CCCccc---CCCCcCCCCCCCCCcccHHHHHHHHHHHHhCCHHH
Confidence 999999999 999999999999999999999 999987 44455678999999999999999999999999999
Q ss_pred HHHHHHhhhccccccccCCCcccccccHHHHHHHHhhhccccCCCCCchhhHHHHHHHHHHHHHHhhccCCcccccCCcc
Q 043321 349 LAYATERFKAAEDEETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKTQGGL 428 (617)
Q Consensus 349 l~~a~~~~~~~~~~~~~~~~~~~~Wdn~~~~a~~lLa~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~Gl 428 (617)
++++++++.. +........|+|++|..+++++|++++. . +.|++.++.++|.++. ...+||+|+
T Consensus 232 l~~~~~~~~~---~~~~~~~~~~~Wd~~~~g~~~lla~~~~--~---------~~~~~~~~~~~~~~~~--~~~~tp~Gl 295 (433)
T 1ks8_A 232 LNTAESLYDE---FGLQNWGGGLNWDSKVSGVQVLLAKLTN--K---------QAYKDTVQSYVNYLIN--NQQKTPKGL 295 (433)
T ss_dssp HHHHHHHHHH---TTGGGSCCCCCSSCCHHHHHHHHHHHHC--C---------HHHHHHHHHHHHHHHH--TSCBCTTSC
T ss_pred HHHHHHHHHh---cCcCcCcCCcCccchhhHHHHHHhhccC--h---------HHHHHHHHHHHHHHHh--cCCcCCCCc
Confidence 9999986532 2222235689999999999999987753 1 4688888888888775 467899999
Q ss_pred eeeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcceEEeeCCCCCCC
Q 043321 429 ILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQ 508 (617)
Q Consensus 429 ~~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~SyVvG~G~~~P~~ 508 (617)
.|...| |||+|++|+||++++++++ .+++.+|+++|++|||||||+| ++|||||||.|+|++
T Consensus 296 ~~~~~W--Gs~~~~~n~a~l~~~~~~~--------------~~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p~~ 357 (433)
T 1ks8_A 296 LYIDMW--GTLRHAANAAFIMLEAAEL--------------GLSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTR 357 (433)
T ss_dssp BCCCST--THHHHHHHHHHHHHHHHHT--------------TSSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSC
T ss_pred eeecCC--chhHHHHHHHHHHHHHHhc--------------CCCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCCCC
Confidence 998899 9999999999999999984 1468899999999999999998 889999999999999
Q ss_pred ccccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCCCCCCcccCCCCcccCcccccccHHHHHHHHHhcC
Q 043321 509 VHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHD 586 (617)
Q Consensus 509 pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~lv~ala~l~~ 586 (617)
||||.+++|.. +..|. |.+++++.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|..
T Consensus 358 pHHR~s~~~~~---~~~c~--~~~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~ 430 (433)
T 1ks8_A 358 PHHRSSSCPPA---PATCD--WNTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA 430 (433)
T ss_dssp CSCHHHHCCCT---TSCCS--HHHHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred CcchhhcCCCc---ccccc--ccccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHh
Confidence 99999999853 34665 456899999999999999999999999999999999999999999999999999976
No 2
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=2.6e-108 Score=902.27 Aligned_cols=427 Identities=31% Similarity=0.525 Sum_probs=369.5
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCC-CCCCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchhHHHHHHHH
Q 043321 113 PHSPTKNLTLAVNQALTFFDAQKSGNY-PNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSW 191 (617)
Q Consensus 113 ~~i~~~~Y~~al~~sL~Ff~aQRsG~l-p~~~~v~Wr~~s~l~Dg~~~g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~w 191 (617)
.+.++++|.++|+++|+||++||||++ |+.++++||++||+.||.+.+ +||+|||||||||+||++|||+|+++|+|
T Consensus 19 ~~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~--~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w 96 (466)
T 2xfg_A 19 PATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAG--IDLTGGWYDAGDHVKFNLPMSYSAAMLGW 96 (466)
T ss_dssp --CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGT--SCCCCSBCCSSSCCEEHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCccccccccc--ccCCCCceeCCCCCeeccccHHHHHHHHH
Confidence 456789999999999999999999997 999999999999999998654 59999999999999999999999999999
Q ss_pred HHHHhHHHHhhcCChhHHHHHHHHHHHHHHhhCCCCCCC---c--cCcccCCcCCCCCCCCCcceEecCC--CchhHHHH
Q 043321 192 SVIEYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDT---K--VSNDINCWQRPEDMSYVRPVSVCDS--TASDLAGE 264 (617)
Q Consensus 192 a~~e~~~~~~~~~~~pdiLdEikWglD~Llkmgd~~~g~---~--~~~Dh~~W~~PEd~~~~R~v~~~s~--~gsdlaa~ 264 (617)
+++||++.|++.+++||||||||||+||||||....+.. + ...||.||++||+|+.+|++|.++. ++|+++++
T Consensus 97 ~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e 176 (466)
T 2xfg_A 97 AVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAE 176 (466)
T ss_dssp HHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHH
T ss_pred HHHHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHH
Confidence 999999999999999999999999999999995443311 1 1579999999999999999998764 38999999
Q ss_pred HHHHHHHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCC-CcccchhHHHHHHHHHH
Q 043321 265 IIAALSAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNS-TSFIDELVWGGTWLFFA 342 (617)
Q Consensus 265 ~AAALAaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~s-s~~~DE~~WAAaeLy~A 342 (617)
+|||||+||||||+ |++||++||++||++|+||++ +|+.|. . +..+++|+| +++.||++|||+|||+|
T Consensus 177 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~-----~~~~~~---~--~~~~~~Y~s~s~~~DEl~WAAawLy~A 246 (466)
T 2xfg_A 177 TSAALAIASIIFKKVDGEYSKECLKHAKELFEFADT-----TKSDDG---Y--TAANGFYNSWSGFYDELSWAAVWLYLA 246 (466)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHH-----HCCCTT---C--CTTTTTSCCSSCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHh-----cCCcCC---C--CccccccCCCCCCchHHHHHHHHHHHH
Confidence 99999999999999 999999999999999999999 898774 2 346789999 99999999999999999
Q ss_pred hCChhHHHHHHHhhhcccc---ccccCCCcccccccHHHHHHHHhhhccccCCCCCchhhHHHHHHHHHHHHHHhhccC-
Q 043321 343 TGNNSYLAYATERFKAAED---EETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSD- 418 (617)
Q Consensus 343 TGd~~Yl~~a~~~~~~~~~---~~~~~~~~~~~Wdn~~~~a~~lLa~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~- 418 (617)
|||++|+++++.++..... .......+.|+||+|..+++++|++++... . .|++.++..++.++.+
T Consensus 247 Tgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~------~----~~~~~~~~~~~~~~~~~ 316 (466)
T 2xfg_A 247 TNDSSYLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIKNDN------G----KYKEAIERHLDWWTTGY 316 (466)
T ss_dssp HCCHHHHHHHHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHHCSS------C----HHHHHHHHHHHHHTTCB
T ss_pred hCCHHHHHHHHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHhcCCc------H----HHHHHHHHHHHHHHhcc
Confidence 9999999999986532110 001123468999999999999999875421 1 2444444555544422
Q ss_pred --CcccccCCcceeeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcc
Q 043321 419 --HIFNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMS 496 (617)
Q Consensus 419 --~~~~~Tp~Gl~~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~S 496 (617)
..+++||+||+|...| ||+||++|++||+++|++++. |+ ..++++|+++|++|||||||+| ++|
T Consensus 317 ~~~~~~~tp~Gl~~~~~W--gs~~~~~n~afl~~~y~~~~~--------~~--~~~~~~y~~~A~~qidYiLG~N--~~S 382 (466)
T 2xfg_A 317 NGERITYTPKGLAWLDQW--GSLRYATTTAFLACVYSDWEN--------GD--KEKAKTYLEFARSQADYALGST--GRS 382 (466)
T ss_dssp TTBCCCBCTTSCBCCCSS--SHHHHHHHHHHHHHHHHTCTT--------SC--HHHHHHHHHHHHHHHHHHHTTT--SSC
T ss_pred CCCccccCCccccccCCC--CchHHHHHHHHHHHHHHHhcC--------CC--cccHHHHHHHHHHhHHhhcCCC--Ccc
Confidence 5678899999999999 999999999999999999742 42 2347899999999999999999 999
Q ss_pred eEEeeCCCCCCCccccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCCCCCCcccCCCCcccCcccccccHH
Q 043321 497 YMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAG 576 (617)
Q Consensus 497 yVvG~G~~~P~~pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~ 576 (617)
||||||+|+|+|||||.+++|+. .+++++.|||++|+|+||||||..|+|.|+|.+|++|||||||||+
T Consensus 383 yvvG~G~~~p~~pHHR~ss~~~~-----------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~ 451 (466)
T 2xfg_A 383 FVVGFGENPPKRPHHRTAHGSWA-----------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAG 451 (466)
T ss_dssp CBTTSSSSCCSCCSCHHHHTCSS-----------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHH
T ss_pred eEeccCCCCCCCCcCchhccCcc-----------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHH
Confidence 99999999999999999998753 2356789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 043321 577 LVAALIALHD 586 (617)
Q Consensus 577 lv~ala~l~~ 586 (617)
||++||+|..
T Consensus 452 ~v~~la~l~~ 461 (466)
T 2xfg_A 452 FVGLLAKMYK 461 (466)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999976
No 3
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=1.8e-108 Score=899.48 Aligned_cols=415 Identities=30% Similarity=0.524 Sum_probs=366.8
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCC-CCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchhHHHHHHHHHHH
Q 043321 116 PTKNLTLAVNQALTFFDAQKSGNYPN-YSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVI 194 (617)
Q Consensus 116 ~~~~Y~~al~~sL~Ff~aQRsG~lp~-~~~v~Wr~~s~l~Dg~~~g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~wa~~ 194 (617)
+.++|.++|+++|+||++||||++|+ +++++||++||+.||.+.+ +||+|||||||||+||++|||+++++|+|+++
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~~--~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~ 79 (441)
T 1ia6_A 2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVG--VDLTGGYHDAGDHVKFGLPQGYSAAILGWSLY 79 (441)
T ss_dssp CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTTT--SCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCCc--ccCCCCeeeCCCCCeeccchHHHHHHHHHHHH
Confidence 45899999999999999999999887 8999999999999998665 49999999999999999999999999999999
Q ss_pred HhHHHHhhcCChhHHHHHHHHHHHHHHhhCCCCCCC---cc--CcccCCcCCCCCCCCCcce-EecCCC--chhHHHHHH
Q 043321 195 EYQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDT---KV--SNDINCWQRPEDMSYVRPV-SVCDST--ASDLAGEII 266 (617)
Q Consensus 195 e~~~~~~~~~~~pdiLdEikWglD~Llkmgd~~~g~---~~--~~Dh~~W~~PEd~~~~R~v-~~~s~~--gsdlaa~~A 266 (617)
||++.|++.+++||||||||||+||||||+..+++. +. ..||.||++||+|+.+|++ |.++.+ +|++++++|
T Consensus 80 e~~~~~~~~g~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~A 159 (441)
T 1ia6_A 80 EFKESFDATGNTTKMLQQLKYFTDYFLKSHPNSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETS 159 (441)
T ss_dssp HCHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHH
T ss_pred HhHHHHhhcCcHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHH
Confidence 999999999999999999999999999996554321 11 4699999999999999999 988643 899999999
Q ss_pred HHHHHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhCC
Q 043321 267 AALSAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGN 345 (617)
Q Consensus 267 AALAaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd 345 (617)
||||+||||||+ |++||++||++||++|+||++ +|+.+. ..++|+|+++.||++|||+|||+||||
T Consensus 160 AalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~-----~~g~~~--------~~~~Y~ss~~~DE~~WAAa~Ly~aTgd 226 (441)
T 1ia6_A 160 AALTLMYLNYKNIDSAYATKCLNAAKELYAMGKA-----NQGVGN--------GQSFYQATSFGDDLAWAATWLYTATND 226 (441)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH-----SCSCCC--------CTTTSCCCCSHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH-----cCCCCC--------CCCCCCCCCchhHHHHHHHHHHHHhCC
Confidence 999999999999 999999999999999999999 887543 468999999999999999999999999
Q ss_pred hhHHHHHHHhhhcccccc--ccCCCcccccccHHHHHHHHhhhccccCCCCCchhhHHHHHHHHHHHHHHhhccCCcccc
Q 043321 346 NSYLAYATERFKAAEDEE--TESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNK 423 (617)
Q Consensus 346 ~~Yl~~a~~~~~~~~~~~--~~~~~~~~~Wdn~~~~a~~lLa~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (617)
++|++++++++.+..+.. .....+.|+||+|..++++||++++. . +.|++.++..++.++. .+++
T Consensus 227 ~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~--~---------~~~~~~~~~~~~~~~~--~~~~ 293 (441)
T 1ia6_A 227 STYITDAEQFITLGNTMNENKMQDKWTMCWDDMYVPAALRLAQITG--K---------QIYKDAIEFNFNYWKT--QVTT 293 (441)
T ss_dssp THHHHHHHHHTTC------CGGGCSSCSSSSCCHHHHHHHHHHHHC--C---------HHHHHHHHHHHHHHHH--TSCB
T ss_pred HHHHHHHHHHHhhhhhcccccccCCCcCCccchHHHHHHHHHhccC--c---------HHHHHHHHHHHHHHHh--hccc
Confidence 999999998754211110 01235689999999999999988753 1 3567777777665553 5788
Q ss_pred cCCcceeeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcceEEeeCC
Q 043321 424 TQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGD 503 (617)
Q Consensus 424 Tp~Gl~~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~SyVvG~G~ 503 (617)
||+|+.|...| |+++|++|++||+++|++++ ++++|+++|++|||||||+||+++|||||||.
T Consensus 294 tp~Gl~~~~~W--Gs~~~~~~~a~l~~~~~~~~---------------~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~ 356 (441)
T 1ia6_A 294 TPGGLKWLSNW--GVLRYAAAESMVMLVYCKQN---------------PDQSLLDLAKKQVDYILGDNPANMSYIIGYGS 356 (441)
T ss_dssp CTTSCBCCCST--THHHHHHHHHHHHHHHHHHS---------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSS
T ss_pred CCCCceecCCc--chHHHHHHHHHHHHHHHhhc---------------CHHHHHHHHHHHHHHhcCCCCCCceeEEecCC
Confidence 99999998899 99999999999999999853 46799999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCCCCCCcccCCCCcccCcccccccHHHHHHHHH
Q 043321 504 KYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIA 583 (617)
Q Consensus 504 ~~P~~pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~lv~ala~ 583 (617)
|+|++||||.++++.. .++++|.||+++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+
T Consensus 357 ~~p~~pHHR~s~~~~~-----------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~ 425 (441)
T 1ia6_A 357 NWCIHPHHRAANGYTY-----------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLVGVLAG 425 (441)
T ss_dssp SCCSCCBCHHHHCCCC-----------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHHHHHHH
T ss_pred CCCCCCcChhhccCCc-----------cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHHHHHHH
Confidence 9999999999998753 24677999999999999999999999999999999999999999999999999
Q ss_pred hcC
Q 043321 584 LHD 586 (617)
Q Consensus 584 l~~ 586 (617)
|..
T Consensus 426 l~~ 428 (441)
T 1ia6_A 426 AIK 428 (441)
T ss_dssp HHH
T ss_pred HHH
Confidence 988
No 4
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=9.6e-108 Score=923.35 Aligned_cols=425 Identities=35% Similarity=0.623 Sum_probs=377.1
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchhHHHHHHHHHHHH
Q 043321 116 PTKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIE 195 (617)
Q Consensus 116 ~~~~Y~~al~~sL~Ff~aQRsG~lp~~~~v~Wr~~s~l~Dg~~~g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~wa~~e 195 (617)
+.++|.++|+++|+||++||||+||+.++++||++|||.||.+.+. ||+|||||||||+||++|||+++++|+|+++|
T Consensus 2 ~~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~~~--Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e 79 (605)
T 1tf4_A 2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGL--DLTGGWYDAGDHVKFGFPMAFTATMLAWGAIE 79 (605)
T ss_dssp CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTS--CCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccccc--cCCCceeECCCCCEeccchHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999987654 99999999999999999999999999999999
Q ss_pred hHHHHhhcCChhHHHHHHHHHHHHHHhhCCCCCC---Cc--cCcccCCcCCCCCCCCCcceEecCCC--chhHHHHHHHH
Q 043321 196 YQEKYAEIGELNHVKDIIKWGSDYLLKVGSTGND---TK--VSNDINCWQRPEDMSYVRPVSVCDST--ASDLAGEIIAA 268 (617)
Q Consensus 196 ~~~~~~~~~~~pdiLdEikWglD~Llkmgd~~~g---~~--~~~Dh~~W~~PEd~~~~R~v~~~s~~--gsdlaa~~AAA 268 (617)
|++.|+..|++||||||||||+||||||+...+. -+ ...||+||++||+|+.+|++|.++.+ |||+++++|||
T Consensus 80 ~~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAA 159 (605)
T 1tf4_A 80 SPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAA 159 (605)
T ss_dssp CHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHH
T ss_pred hHHHHhhcCCcccHHHHHHHHHHHHHHhccCCCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHH
Confidence 9999999999999999999999999999865431 01 15799999999999999999998644 89999999999
Q ss_pred HHHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCC-CcccchhHHHHHHHHHHhCCh
Q 043321 269 LSAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNS-TSFIDELVWGGTWLFFATGNN 346 (617)
Q Consensus 269 LAaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~s-s~~~DE~~WAAaeLy~ATGd~ 346 (617)
||+||||||+ |++||++||++||++|+||++ +|+.|. ++++ .+++|+| +++.||++|||+|||+||||+
T Consensus 160 lAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~-----~~g~y~---~~~~-~~~~Y~s~s~~~DEl~WAAawLy~ATgd~ 230 (605)
T 1tf4_A 160 MAASSIVFADDDPAYAATLVQHAKQLYTFADT-----YRGVYS---DCVP-AGAFYNSWSGYQDELVWGAYWLYKATGDD 230 (605)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH-----SCCCGG---GTST-THHHHCCSSCSHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHhhccccCHHHHHHHHHHHHHHHHHHHH-----cCCCcC---CCCC-ccccccCCCCCchHHHHHHHHHHHHhCCH
Confidence 9999999999 999999999999999999999 999997 4455 7889999 999999999999999999999
Q ss_pred hHHHHHHHhhhccccccc---cCCCcccccccHHHHHHHHhhhccccCCCCCchhhHHHHHHHHHHHHHHhhccC---Cc
Q 043321 347 SYLAYATERFKAAEDEET---ESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSD---HI 420 (617)
Q Consensus 347 ~Yl~~a~~~~~~~~~~~~---~~~~~~~~Wdn~~~~a~~lLa~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~ 420 (617)
+|+++++.++........ ....+.|+||+|..++++||++++. . +.|++.++.++|.++.+ ..
T Consensus 231 ~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~--~---------~~y~~~a~~~~~~~~~~~~~~~ 299 (605)
T 1tf4_A 231 SYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETG--K---------QKYIDDANRWLDYWTVGVNGQR 299 (605)
T ss_dssp HHHHHHHHHGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHHC--C---------HHHHHHHHHHHHHTTTCBTTBC
T ss_pred HHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHhccC--h---------HHHHHHHHHHHHHHhcccCCCc
Confidence 999999986642110000 0122689999999999999987653 1 46999999999987643 45
Q ss_pred ccccCCcceeeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcceEEe
Q 043321 421 FNKTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVG 500 (617)
Q Consensus 421 ~~~Tp~Gl~~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~SyVvG 500 (617)
+++||+|+.|...| |+++|++|+|||+++|++++.. ..+.++|+++|++|||||||+||+++|||||
T Consensus 300 ~~~tp~Gl~~~~~W--Gs~~~~~n~a~l~~~~a~~~~~-----------~~~~~~y~~~A~~qidYiLG~Np~~~SyvvG 366 (605)
T 1tf4_A 300 VPYSPGGMAVLDTW--GALRYAANTAFVALVYAKVIDD-----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVG 366 (605)
T ss_dssp CCBCTTSCBCCCSS--SHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTT
T ss_pred cccCCCcceecCCc--cHHHHHHHHHHHHHHHHHhccc-----------cccHHHHHHHHHHHHHHhcCCCCCCcceEec
Confidence 78899999998899 9999999999999999998542 1246899999999999999999999999999
Q ss_pred eCCCCCCCccccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCCC-CCCcccCCCCcccCcccccccHHHHH
Q 043321 501 FGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDI-FDNFSDERDKPWFTEPSIASNAGLVA 579 (617)
Q Consensus 501 ~G~~~P~~pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn~-~d~y~D~r~~y~~NEvaId~NA~lv~ 579 (617)
||.|+|++||||.++|+.. ..++.|.|||++|+|+||||||. .|+|.|+|.+|++|||||||||+||+
T Consensus 367 ~G~~~p~~pHHR~ss~~~~-----------~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~lv~ 435 (605)
T 1tf4_A 367 FGNNPPRNPHHRTAHGSWT-----------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSS 435 (605)
T ss_dssp SSSSCCSCCSCHHHHTCSS-----------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHH
T ss_pred CCCCCCCCCcccccccCcc-----------ccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHHHH
Confidence 9999999999999987542 13557889999999999999998 99999999999999999999999999
Q ss_pred HHHHhcC
Q 043321 580 ALIALHD 586 (617)
Q Consensus 580 ala~l~~ 586 (617)
+||+|..
T Consensus 436 ~lA~l~~ 442 (605)
T 1tf4_A 436 ALAMLVE 442 (605)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999987
No 5
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=2.3e-108 Score=929.27 Aligned_cols=459 Identities=23% Similarity=0.397 Sum_probs=370.2
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCChhHHHHHHHHHHHHHHHhcCCCCC-CCCCCCCCCCCCCCCC--
Q 043321 81 AYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVNQALTFFDAQKSGNYPN-YSPVKFRGNSGMQDGK-- 157 (617)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~~Y~~al~~sL~Ff~aQRsG~lp~-~~~v~Wr~~s~l~Dg~-- 157 (617)
+..|+++..+++++++.+++ ..+|.....+.++++|.++|+++|+||++||||++|+ ++++.||++||++|+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~WR~~shl~D~~~p 80 (611)
T 2yik_A 5 LFAKRAVAFLLGIVITAAGI----VSFNTVSTSAAGEYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLP 80 (611)
T ss_dssp -------------------------------------CCHHHHHHHHTHHHHHHBCBTTHHHHCSCTTCCCBCGGGGGEE
T ss_pred HHHHHHHHHHHHHHHHHhhh----hccccccccccchhHHHHHHHHHHHHHHHHcCCCCCCcccCCCcCCCCCccccccc
Confidence 34555555554544444432 2334444446778999999999999999999999887 8999999999999981
Q ss_pred ----------------------CCCccccccccccccCCCcccccchhHHHHHHHHHHHHhHHHHhhcCChhHHHHHHHH
Q 043321 158 ----------------------VSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKW 215 (617)
Q Consensus 158 ----------------------~~g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~wa~~e~~~~~~~~~~~pdiLdEikW 215 (617)
+.+..+||+|||||||||+||++|+|+++++|+|+++||++.|++.+++|||||||||
T Consensus 81 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~DlsGGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikw 160 (611)
T 2yik_A 81 LDSQNTNMSDGFISSNRSVLDPDGDGKVDVSGGFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRY 160 (611)
T ss_dssp CSTTTBSSCHHHHHHHHHHHCTTCSSEECCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHH
T ss_pred ccccccccccccccccccccccCCCCcccCCCCceeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHH
Confidence 1233789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhC----CCCCCCc------cCcccCCcCCCCCCCCCcceEecCC--CchhHHHHHHHHHHHhcccCCC-ChhH
Q 043321 216 GSDYLLKVG----STGNDTK------VSNDINCWQRPEDMSYVRPVSVCDS--TASDLAGEIIAALSAASIVFKD-EIMY 282 (617)
Q Consensus 216 glD~Llkmg----d~~~g~~------~~~Dh~~W~~PEd~~~~R~v~~~s~--~gsdlaa~~AAALAaAS~vfk~-D~~y 282 (617)
|+||||||| ++..|.+ ...||.||++||+|+++|++|.++. +|||+++++|||||+||||||+ |++|
T Consensus 161 g~Dyllkmq~~~~~~~~g~~y~qVgdg~~Dh~~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~y 240 (611)
T 2yik_A 161 FNDYFMRCTFRDASGNVVAFCHQVGDGDIDHAFWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQY 240 (611)
T ss_dssp HHHHHHHTEEECTTSCEEEEEEEESCHHHHTTCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHcccccccCCCCcEEEEeCCCCccccCCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHH
Confidence 999999995 5432221 1469999999999999999998864 4999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhCChhHHHHHHHhhhccccc
Q 043321 283 SGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFKAAEDE 362 (617)
Q Consensus 283 A~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd~~Yl~~a~~~~~~~~~~ 362 (617)
|++||++||++|+||++ +|+.|. ++.+..+++|+|+++.||++|||+|||+||||++|+++++.++.. +
T Consensus 241 A~~~L~~Ak~~~~fA~~-----~~~~y~---~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~---~ 309 (611)
T 2yik_A 241 AAKSLDYAKALFDFAEK-----NPKGVV---QGEDGPKGYYGSSKWQDDYCWAAAWLYLATQNEHYLDEAFKYYDY---Y 309 (611)
T ss_dssp HHHHHHHHHHHHHHHHH-----SCCCCC---CGGGTTTTTSCCCCSHHHHHHHHHHHHHHHCCHHHHHHHHHHCCT---T
T ss_pred HHHHHHHHHHHHHHHHH-----cCCccc---CCCcccCcCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHH---h
Confidence 99999999999999999 999986 445567899999999999999999999999999999999986521 1
Q ss_pred cccCCCcccccccHHHHHHHHhhhccccCCCCCchhhHHHHHHHHHHHH----------HHhhccC---CcccccCCcce
Q 043321 363 ETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEIL----------MCSYLSD---HIFNKTQGGLI 429 (617)
Q Consensus 363 ~~~~~~~~~~Wdn~~~~a~~lLa~~~~~~~~~~p~~~~~~~~~~~~~~~----------~~~~~~~---~~~~~Tp~Gl~ 429 (617)
....+.|+||++..++++||+++...... . ..++.+.|++.++.. +|..+++ ..+++||+|+.
T Consensus 310 --~~~~~~~~Wd~~~~g~~~lLa~~~~~~~~-~-~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~Gl~ 385 (611)
T 2yik_A 310 --APPGWIHCWNDVWSGTACILAEINDLYDK-D-SQNFEDRYKRASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYV 385 (611)
T ss_dssp --STTTSCSBTTBCHHHHHHHHHHHHHHHST-T-SSHHHHHHHHHTTCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTSCB
T ss_pred --ccCCccCccccchHHHHHHHHhccccccc-c-ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCceeccCCcccc
Confidence 13456899999999999998887542100 0 012345677666553 2332211 56788999999
Q ss_pred eeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcceEEeeCCCCCCCc
Q 043321 430 LLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQV 509 (617)
Q Consensus 430 ~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~SyVvG~G~~~P~~p 509 (617)
|...| |+++|++|++||+++|++++. ...++|+++|++|||||||+||+++|||||||.|+|+||
T Consensus 386 ~~~~W--Gs~~~~~~~afl~~~ya~~~~-------------~~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~p 450 (611)
T 2yik_A 386 FLNQW--GSARYNTAAQLIALVYDKHHG-------------DTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYP 450 (611)
T ss_dssp CSCST--THHHHHHHHHHHHHHHHHTTT-------------SSCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCC
T ss_pred ccCCC--chHHHHHHHHHHHHHHHHhcC-------------ccHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCC
Confidence 99899 999999999999999998642 235799999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCCCCCCcccCCCCcccCcccccccHHHHHHHHHhcC
Q 043321 510 HHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHD 586 (617)
Q Consensus 510 HHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~lv~ala~l~~ 586 (617)
|||.++++.+ ++.|.||+++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|..
T Consensus 451 HHR~a~~~~~-------------~~~p~p~~~vl~GaLVGGPd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~ 514 (611)
T 2yik_A 451 HHRAASGLKD-------------ANDSSPHKYVLYGALVGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYR 514 (611)
T ss_dssp BCHHHHCCSC-------------TTCCSCCSSCCTTCBCSCCCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHH
T ss_pred cchhhcCccc-------------ccCCCCCCCCCCceeecCCCcccCcCCCCcceeeccceecCccHHHHHHHHHHH
Confidence 9999988641 456889999999999999999999999999999999999999999999999987
No 6
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=1e-105 Score=907.61 Aligned_cols=422 Identities=29% Similarity=0.511 Sum_probs=372.0
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCcccccchhHHHHHHHHHHHHh
Q 043321 117 TKNLTLAVNQALTFFDAQKSGNYPNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEY 196 (617)
Q Consensus 117 ~~~Y~~al~~sL~Ff~aQRsG~lp~~~~v~Wr~~s~l~Dg~~~g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~wa~~e~ 196 (617)
.++|.++|++||+||++||||++|+.+++.||++||+.||.+.+ +||+|||||||||+||++|||+++++|+|+++||
T Consensus 3 ~~~Y~~al~~sl~ff~~QRsG~lp~~~~~~WRgdshl~Dg~~~~--~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~e~ 80 (614)
T 1g87_A 3 TYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVG--VDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYED 80 (614)
T ss_dssp CCCHHHHHHHHHHHHHHHBCBSCCTTCSBSSCCCBSTTTTGGGT--SCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCccccccccc--ccCCCCeeeCCCCcEeccccHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999999998665 4999999999999999999999999999999999
Q ss_pred HHHHhhcCChhHHHHHHHHHHHHHHhhCCCCCCC---c--cCcccCCcCCCCCCCCCcceEecCCC--chhHHHHHHHHH
Q 043321 197 QEKYAEIGELNHVKDIIKWGSDYLLKVGSTGNDT---K--VSNDINCWQRPEDMSYVRPVSVCDST--ASDLAGEIIAAL 269 (617)
Q Consensus 197 ~~~~~~~~~~pdiLdEikWglD~Llkmgd~~~g~---~--~~~Dh~~W~~PEd~~~~R~v~~~s~~--gsdlaa~~AAAL 269 (617)
++.|++.+++||||||||||+||||||....+.. + ...||+||++||+|+.+|++|.++.+ ||++++++||||
T Consensus 81 ~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAl 160 (614)
T 1g87_A 81 KDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASL 160 (614)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHH
T ss_pred HHHHhhCCChHHHHHHHHHHHHHHHHhccCCCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999996443311 1 15799999999999999999988743 899999999999
Q ss_pred HHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhCChhH
Q 043321 270 SAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSY 348 (617)
Q Consensus 270 AaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd~~Y 348 (617)
|+||||||+ |++||++||++||++|+||++ +|+.+. .+..+++|+|+++.||++|||+|||+||||++|
T Consensus 161 AaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~-----~~~~~~-----~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Y 230 (614)
T 1g87_A 161 ASAAVVFKSSDPTYAEKCISHAKNLFDMADK-----AKSDAG-----YTAASGYYSSSSFYDDLSWAAVWLYLATNDSTY 230 (614)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH-----HCCCTT-----CCTTTTTSCCSCSHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHhccccCHHHHHHHHHHHHHHHHHHHH-----cCCCCC-----CCcCcCCcCCCCchhHHHHHHHHHHHHhCCHHH
Confidence 999999999 999999999999999999999 888653 234678999999999999999999999999999
Q ss_pred HHHHHHhhhcccc---ccccCCCcccccccHHHHHHHHhhhccccCCCCCchhhHHHHHHHHHHHHHHhhccC---Cccc
Q 043321 349 LAYATERFKAAED---EETESEKGIFYWNNKLTATAVLLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSD---HIFN 422 (617)
Q Consensus 349 l~~a~~~~~~~~~---~~~~~~~~~~~Wdn~~~~a~~lLa~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 422 (617)
+++++.++..... .......+.|+||+|..++++||++++. + +.|++.++.+++.++.+ ..++
T Consensus 231 l~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~ 299 (614)
T 1g87_A 231 LDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLTN--K---------QLYKDSIEMNLDFWTTGVNGTRVS 299 (614)
T ss_dssp HHHHHHTGGGSCBCTTSSSBCCSSCCBTTBCHHHHHHHHHHHHC--C---------HHHHHHHHHHHHHHTTCBTTBCCE
T ss_pred HHHHHHHHHhhccccccccccccCCcCccchHHHHHHHHHhccC--c---------HHHHHHHHHHHHHhhhccCCCccc
Confidence 9999986532110 0011234689999999999999998753 1 35777888887766632 5678
Q ss_pred ccCCcceeeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcceEEeeC
Q 043321 423 KTQGGLILLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFG 502 (617)
Q Consensus 423 ~Tp~Gl~~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~SyVvG~G 502 (617)
+||+||+|...| ||+||++|++||+++|++++. |+ ..++++|+++|++|||||||+| ++|||||||
T Consensus 300 ~tp~Gl~~~~~W--gs~~~~~n~afl~~~y~~~~~--------~~--~~~~~~y~~~A~~qidYiLG~n--~~SyvvG~G 365 (614)
T 1g87_A 300 YTPKGLAWLFQW--GSLRHATTQAFLAGVYAEWEG--------CT--PSKVSVYKDFLKSQIDYALGST--GRSFVVGYG 365 (614)
T ss_dssp ECTTSCEECCSS--SHHHHHHHHHHHHHHHHHSTT--------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSS
T ss_pred cCCCCceeccCC--CcHHHHHHHHHHHHHHHHhhC--------CC--ccCHHHHHHHHHHHHHHhcCCC--CcceEeccC
Confidence 899999999999 999999999999999999752 42 2247899999999999999998 889999999
Q ss_pred CCCCCCccccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCCCCCCcccCCCCcccCcccccccHHHHHHHH
Q 043321 503 DKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALI 582 (617)
Q Consensus 503 ~~~P~~pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~lv~ala 582 (617)
+|+|+|||||++++|+. .++++|.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||
T Consensus 366 ~~~p~~pHHR~ss~~~~-----------~~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEvai~~NA~lv~~lA 434 (614)
T 1g87_A 366 VNPPQHPHHRTAHGSWT-----------DQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALA 434 (614)
T ss_dssp SSCCSCCBCHHHHTCSS-----------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCCHHHHHHHHHHHH
T ss_pred CCCCCCCcchhhccCcc-----------ccccCCCCCCCCccccEeeCCCcccCccccccchhhcCCccccchHHHHHHH
Confidence 99999999999998753 2356789999999999999999999999999999999999999999999999
Q ss_pred HhcC
Q 043321 583 ALHD 586 (617)
Q Consensus 583 ~l~~ 586 (617)
+|..
T Consensus 435 ~l~~ 438 (614)
T 1g87_A 435 KMYK 438 (614)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9987
No 7
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=4.6e-101 Score=858.77 Aligned_cols=450 Identities=18% Similarity=0.159 Sum_probs=371.8
Q ss_pred eeccccccCCCCCCCCCCCCCccceeeeeeeeeccchhhHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCChhHHHHHH
Q 043321 46 TEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVN 125 (617)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~~Y~~al~ 125 (617)
.+++..+.+. +++.+.+||+.|..+|++++.. .. ++.| |.|++++|.++|+
T Consensus 43 ~V~~g~~~~~---------g~~~~~~DFS~~~~pG~Y~l~~--~~--------------~S~~----F~I~~~~Y~~~l~ 93 (537)
T 3gzk_A 43 AVFAGMTKPV---------GGNWYVGDFTALRVPGTYTLTV--GT--------------LEAR----VVIHRRAYRDVLE 93 (537)
T ss_dssp EEEEEECEEE---------ETTEEEEECTTCCSCEEEEEEE--TT--------------EEEE----EEEETTTTHHHHH
T ss_pred EEEEEeeecC---------CCeEEEEeccCCCCCceEEEEE--cc--------------ccCC----ceeCcchHHHHHH
Confidence 4446666665 7788999999999999977554 22 5666 5899999999999
Q ss_pred HHHHHHHHHhcCC-CCCCCCCCCCCCCCCCC-CCCC--CccccccccccccCCCcccccchhHHHHHHHHHHHHhHHHHh
Q 043321 126 QALTFFDAQKSGN-YPNYSPVKFRGNSGMQD-GKVS--NLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIEYQEKYA 201 (617)
Q Consensus 126 ~sL~Ff~aQRsG~-lp~~~~v~Wr~~s~l~D-g~~~--g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~wa~~e~~~~~~ 201 (617)
++|+||++||||+ ||++++++||+++||.| +... ...+||+|||||||||+||++|||+++++|+|+|++|++.|.
T Consensus 94 ~sl~ff~~QRsG~~l~~~~~~~wr~~~~h~dd~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a~t~~~L~~a~~~~~~~~~ 173 (537)
T 3gzk_A 94 AMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAAKAVADLLLAHEYFPAALA 173 (537)
T ss_dssp HHHHHHHHTBSSSCBCHHHHGGGCBCCCCCSCEEETTSSCEECCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHhCCCcCCccccCCCCCcccccCcccccCCcCccccccceecCCCcceecccHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999 99999999998877654 3211 237899999999999999999999999999999999999997
Q ss_pred h-------cCC--hhHHHHHHHHHHHHHHhhCCCCCCCcc-CcccCCc----CCCCCCCCCcceEecCCCchhHHHHHHH
Q 043321 202 E-------IGE--LNHVKDIIKWGSDYLLKVGSTGNDTKV-SNDINCW----QRPEDMSYVRPVSVCDSTASDLAGEIIA 267 (617)
Q Consensus 202 ~-------~~~--~pdiLdEikWglD~Llkmgd~~~g~~~-~~Dh~~W----~~PEd~~~~R~v~~~s~~gsdlaa~~AA 267 (617)
+ +|+ +||||||||||+|||||||+++.|.++ .+...+| .+||+|+.+|+++++++ ..++++||
T Consensus 174 ~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w~g~~~~Pe~~~~~R~~~~~~t---~~~~~~AA 250 (537)
T 3gzk_A 174 HVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISY---AATATFCA 250 (537)
T ss_dssp TCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSCCCTTCCGGGCCSCEEECCBCH---HHHHHHHH
T ss_pred hhhccccccCcccHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCcCCCCcCcccCCCcceEeecCC---cHHHHHHH
Confidence 5 577 999999999999999999986544332 2323367 89999999999999873 35899999
Q ss_pred HHHHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhCCh
Q 043321 268 ALSAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNN 346 (617)
Q Consensus 268 ALAaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd~ 346 (617)
|||+||||||+ ||+||++||++|+++|+||++ +|+.+.. ++.+...++|+++++.||++|||+|||+||||.
T Consensus 251 alA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~-----~~~~~~~--~~~~~~~~~Y~~~~~~Del~wAA~~Ly~aTgd~ 323 (537)
T 3gzk_A 251 AMAHAALVYRPFDPALSSCCADAARRAYAWLGA-----HEMQPFH--NPDGILTGEYGDAELRDELLWASCALLRMTGDS 323 (537)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-----SCCCCCC--CCTTCCSCCCCCSCCHHHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHh-----ccccccc--CCcccccCCcCCCccchHHHHHHHHHHHHhCCH
Confidence 99999999999 999999999999999999999 8886431 334456899999999999999999999999999
Q ss_pred hHHHHHHHhhhccccccccCCCcccccccHHHHHHH--HhhhccccCCCCCchhhHHHHHHHHHHHHHHhhccCCccccc
Q 043321 347 SYLAYATERFKAAEDEETESEKGIFYWNNKLTATAV--LLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDHIFNKT 424 (617)
Q Consensus 347 ~Yl~~a~~~~~~~~~~~~~~~~~~~~Wdn~~~~a~~--lLa~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~T 424 (617)
+|++++++++.. . ..+.|+||+|..++++ ||++.+. .++ ...+++++.+++.++.++.. . +.+
T Consensus 324 ~Yl~~a~~~~~~--~-----~~~~~~Wd~~~~~~~~~ll~~~~~~-~~~-~~~~~~~~~~~~~ad~~~~~-~-----~~~ 388 (537)
T 3gzk_A 324 AWARVCEPLLDL--D-----LPWELGWADVALYGVMDYLRTPRAA-VSD-DVRNKVKSRLLRELDALAAM-A-----ESH 388 (537)
T ss_dssp GGHHHHHHHHHS--C-----CCCCCSSSCCHHHHHHHHHTSCGGG-SCH-HHHHHHHHHHHHHHHHHHHH-H-----HHS
T ss_pred HHHHHHHHhhhc--c-----CCCccchHHhHHHHHHHHHhCcccc-CCH-HHHHHHHHHHHHHHHHHHHh-c-----cCC
Confidence 999999986531 1 2358999999988775 5555432 110 11245566777777766432 2 334
Q ss_pred CCcceee---CCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHH-HhhchhhccCCCCCcceEEe
Q 043321 425 QGGLILL---RPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFS-ISQVHYILGDNPMKMSYMVG 500 (617)
Q Consensus 425 p~Gl~~~---~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A-~~qidYiLG~NP~g~SyVvG 500 (617)
|+|+.+. ..| |||++++|.||++++++++ +++.+|+++| ++|||||||+||+++|||||
T Consensus 389 ~~g~~~~~~~~~W--Gsn~~~~n~a~~l~~a~~~---------------~~~~~y~~~aa~~qidYiLG~NP~~~SyVvG 451 (537)
T 3gzk_A 389 PFGIPMRDDDFIW--GSNMVLLNRAMAFLLAEGV---------------GVLHPAAHTVAQRAADYLFGANPLGQCYVTG 451 (537)
T ss_dssp TTCCSCCGGGCCT--THHHHHHHHHHHHHHHGGG---------------TCCCTTHHHHHHHHHHHHBTCSTTCCBCBBT
T ss_pred CCceeecCCCCcc--cchHHHHHHHHHHHHHhhc---------------cCCHHHHHHHHHHhHHHhcCCCCCCceeEec
Confidence 5555443 257 9999999999999888873 3456899999 99999999999999999999
Q ss_pred eCCCCCCCccccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCCCC----------------CCcccCCCCc
Q 043321 501 FGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDIF----------------DNFSDERDKP 564 (617)
Q Consensus 501 ~G~~~P~~pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn~~----------------d~y~D~r~~y 564 (617)
||+|+|+|||||.++++. ++++++|+||||||.. |+|.|+|.+|
T Consensus 452 ~G~~~p~~pHHR~s~~~~--------------------~~~p~~GalVGGPn~~~~D~~~~~~~~~~~~~d~y~D~~~~y 511 (537)
T 3gzk_A 452 FGQRPVRHPHHRPSVADD--------------------VDHPVPGMVVGGPNRHLQDEIARAQLAGRPAMEAYIDHQDSY 511 (537)
T ss_dssp CSSSCBCSCBCHHHHHHC--------------------TTSCCTTCBCCCCCTTCCSHHHHHHCTTCCGGGCCCCCTTCH
T ss_pred CCCCCCCCCcchhhhcCC--------------------CCCCCCCCCccCCCcccccchhhhcccCCCcccCcCCCCccc
Confidence 999999999999886531 2567999999999976 7999999999
Q ss_pred ccCcccccccHHHHHHHHHhcC
Q 043321 565 WFTEPSIASNAGLVAALIALHD 586 (617)
Q Consensus 565 ~~NEvaId~NA~lv~ala~l~~ 586 (617)
++||||||||||||++||+|.+
T Consensus 512 ~~nEvai~~NA~lv~~lA~l~~ 533 (537)
T 3gzk_A 512 STNEVAVYWNSPAVFVIAALLE 533 (537)
T ss_dssp HHHBCCHHHHHHHHHHHHHHHS
T ss_pred cccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999987
No 8
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=3.9e-100 Score=866.61 Aligned_cols=463 Identities=15% Similarity=0.152 Sum_probs=382.1
Q ss_pred cceeccccccCCCCCCCCCCCCCccceeeeeeeeeccchhhHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCChhHHHH
Q 043321 44 NSTEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLA 123 (617)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~~Y~~a 123 (617)
...+++..+.+ +.+..+++..+++||+.+..+|+|++..- + .-++..|.|++++|.++
T Consensus 75 g~~V~~g~~~~----~~~~~s~~~~~~~DFS~~~~~G~Y~l~~~-~-----------------~~~S~~F~I~~~~Y~~a 132 (639)
T 1clc_A 75 GTIVYTGTATS----MFDNDTKETVYIADFSSVNEEGTYYLAVP-G-----------------VGKSVNFKIAMNVYEDA 132 (639)
T ss_dssp SBEEEEEECEE----EEETTTTEEEEEEECTTCCSCEEEEEEET-T-----------------TEECCCEEECTTTTHHH
T ss_pred CCEEEEeeccc----ccccccCCcEEEEEecccCCCceEEEEEC-C-----------------ccccCCeeechhhhhHH
Confidence 44556777766 67778899999999999999999664332 2 11334468999999999
Q ss_pred HHHHHHHHHHHhcC-CCCCCCCCC-CCCCCCCCCCCC------CCccccccccccccCCCcccccchhHHHHHHHHHHHH
Q 043321 124 VNQALTFFDAQKSG-NYPNYSPVK-FRGNSGMQDGKV------SNLNADLVGGFYDSGNNIKFSFPTAYAVTILSWSVIE 195 (617)
Q Consensus 124 l~~sL~Ff~aQRsG-~lp~~~~v~-Wr~~s~l~Dg~~------~g~~~DlsGGWyDAGDy~Ky~~p~A~sv~~L~wa~~e 195 (617)
|+++|+||++|||| .||++++++ ||+++||.|+.. .+..+||+|||||||||+||++|||+++++|+|+|+|
T Consensus 133 l~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~p~a~t~~~L~w~~~~ 212 (639)
T 1clc_A 133 FKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVVNAGITVGSMFLAWEH 212 (639)
T ss_dssp HHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCccHHHHHHHHHHHHHH
Confidence 99999999999999 599999999 999999888732 3447899999999999999999999999999999999
Q ss_pred hHHHHhh--------cCChhHHHHHHHHHHHHHHhhCCCCC-CCcc-Cc---ccCCcCCCCCCCCCcceEecCCCchhHH
Q 043321 196 YQEKYAE--------IGELNHVKDIIKWGSDYLLKVGSTGN-DTKV-SN---DINCWQRPEDMSYVRPVSVCDSTASDLA 262 (617)
Q Consensus 196 ~~~~~~~--------~~~~pdiLdEikWglD~Llkmgd~~~-g~~~-~~---Dh~~W~~PEd~~~~R~v~~~s~~gsdla 262 (617)
|++.|++ +|++||||||||||+|||||||++.. |.+. .+ ++..+.+||+|+.+|+++.+ +|+++
T Consensus 213 ~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~~~Pe~~~~~R~~~~~---~s~~a 289 (639)
T 1clc_A 213 FKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGFIMPENEHDERFFVPW---SSAAT 289 (639)
T ss_dssp SHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCSCCGGGCCSCCEEEEE---CHHHH
T ss_pred hhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCCCCchhcCCCceEecC---CcHHH
Confidence 9999987 89999999999999999999998654 4321 11 11123899999999999886 47889
Q ss_pred HHHHHHHHHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCc-ccccCCCCCCCCcccCCCcccchhHHHHHHHH
Q 043321 263 GEIIAALSAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGI-YTKVDACGGEARDYYNSTSFIDELVWGGTWLF 340 (617)
Q Consensus 263 a~~AAALAaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~-y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy 340 (617)
+++|||||+||||||+ |++||++||++||++|+||++ +|+. |. ++.+..+++|+|+++.||++|||+|||
T Consensus 290 ~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~-----~~~~~y~---~~~~~~~g~Y~ss~~~DEl~WAAawLy 361 (639)
T 1clc_A 290 ADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKN-----NPANVFA---NQSGFSTGEYATVSDADDRLWAAAEMW 361 (639)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH-----CCSCCCC---CCTTCCSCCCCCSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH-----cCCCccC---CCccccccccCCCCcchHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999 8987 55 334557889999999999999999999
Q ss_pred HHhCChhHHHHHHHhhhccccccccCCCcccccccHHHHHHHHhh-hccccCCCCCchhhHHHHHHHHHHHHHHhhccCC
Q 043321 341 FATGNNSYLAYATERFKAAEDEETESEKGIFYWNNKLTATAVLLT-RLRFFRDLGYPYEGALRSSSSRTEILMCSYLSDH 419 (617)
Q Consensus 341 ~ATGd~~Yl~~a~~~~~~~~~~~~~~~~~~~~Wdn~~~~a~~lLa-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 419 (617)
+||||++|+++++.++.. +. ......|+|+++..+++++|+ +.....++. -.+++++.+++.++.+++..
T Consensus 362 ~ATgd~~Yl~~a~~~~~~---~~-~~~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~---- 432 (639)
T 1clc_A 362 ETLGDEEYLRDFENRAAQ---FS-KKIEADFDWDNVANLGMFTYLLSERPGKNPA-LVQSIKDSLLSTADSIVRTS---- 432 (639)
T ss_dssp HHHCCHHHHHHHHHHHHT---CS-SSCCSSCCTTCCHHHHHHHHHHCCCSCCCHH-HHHHHHHHHHHHHHHHHHHH----
T ss_pred HHhCCHHHHHHHHHHHHh---hc-cccCCCCCchhhHHHHHHHHHhhhhhccChH-HHHHHHHHHHHHHHHHHHhc----
Confidence 999999999999986531 11 111233499999999998877 433221200 01345666777777776542
Q ss_pred cccccCCcce--eeCCCCCchHHHHHHHHHHHHHhhhhhhhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcce
Q 043321 420 IFNKTQGGLI--LLRPGSGGALEFAATASFLSKLYSDYLDLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSY 497 (617)
Q Consensus 420 ~~~~Tp~Gl~--~~~~w~~gsl~ya~n~a~l~~l~ad~~~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~Sy 497 (617)
+.+|+|+. +...| |+|++++|.||+++++.++ +++.+|+++|++|||||||+||+++||
T Consensus 433 --~~~~~g~~~~~~~~W--Gsn~~~~~~a~~~~~a~~l---------------~~~~~~~~~A~~qidYiLG~NP~~~Sy 493 (639)
T 1clc_A 433 --QNHGYGRTLGTTYYW--GCNGTVVRQTMILQVANKI---------------SPNNDYVNAALDAISHVFGRNYYNRSY 493 (639)
T ss_dssp --HTSTTCCTTTTCCCT--THHHHHHHTHHHHHHHHHH---------------SCCHHHHHHHHHHHHHHHTCSTTCCCS
T ss_pred --cCCCCCcccCCCCCC--chHHHHHHHHHHHHHHHhc---------------CCHHHHHHHHHHHHhhccCCCCCCceE
Confidence 34555554 45678 9999999999998887653 356899999999999999999999999
Q ss_pred EEeeCCCCCCCccccCCCCCCCCCCcccccCCCccccCCCCCCCCccceEeeCCCC-CCCcccCCCCcccCcccccccHH
Q 043321 498 MVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNLLVGAMVAGPDI-FDNFSDERDKPWFTEPSIASNAG 576 (617)
Q Consensus 498 VvG~G~~~P~~pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~l~GaLVGGPn~-~d~y~D~r~~y~~NEvaId~NA~ 576 (617)
|||||.|+|+|||||.+++. | .+++++|+||||||. .|+|.|+|.+|++|||+|+|||+
T Consensus 494 vvG~G~~~p~~pHHR~s~~~-----------~---------~~~~~~GalVGGP~~~~d~y~D~r~~y~~nE~~~~~nA~ 553 (639)
T 1clc_A 494 VTGLGINPPMNPHDRRSGAD-----------G---------IWEPWPGYLVGGGWPGPKDWVDIQDSYQTNEIAINWNAA 553 (639)
T ss_dssp BTTSSSSCCSSCBCHHHHHS-----------S---------CSSCCSSCBCCCCCSSTTCCCCCTTCTTTSBCCHHHHHH
T ss_pred EEecCCCCCCCCcchhhccC-----------C---------CCCCCCeeeecCCCccccccccCcccceeccccccchHH
Confidence 99999999999999976542 1 246799999999999 99999999999999999999999
Q ss_pred HHHHHHHhcCC
Q 043321 577 LVAALIALHDP 587 (617)
Q Consensus 577 lv~ala~l~~~ 587 (617)
||++++++...
T Consensus 554 ~v~~la~~~~~ 564 (639)
T 1clc_A 554 LIYALAGFVNY 564 (639)
T ss_dssp HHHHHHTTTTC
T ss_pred HHHHHHHhhhc
Confidence 99999999874
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=2.1e-97 Score=841.00 Aligned_cols=492 Identities=18% Similarity=0.215 Sum_probs=385.4
Q ss_pred eeccccccCCCCCCCCCCCCCccceeeeeeeeeccchhhHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCChhHHHHHH
Q 043321 46 TEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNLTLAVN 125 (617)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~~Y~~al~ 125 (617)
.+++..+.+ .+++..++++.+++||+.|.++|++|++.+.+.+ .....+. .|.|++++|.++|+
T Consensus 43 ~V~~g~~~~---~~~~~~s~~~~~~~DFS~~~~pG~~Y~l~~~~~~---------~g~~~S~----~F~I~~~~Y~~~l~ 106 (609)
T 1ut9_A 43 VVLEGYTEP---KGLDKDSQDYVHWLDFSDFATEGIGYYFELPTVN---------SPTNYSH----PFDIRKDIYTQMKY 106 (609)
T ss_dssp EEEEEECEE---EEEETTTTEEEEEEECTTCCCCEEEEEEECTTCC---------STTCBBC----CEEECTTTTTTHHH
T ss_pred EEEEEeccC---cccccCCCCeEEEEEccCccCCCCeEEEEECccc---------CCCcccc----ceEeCHHHHHHHHH
Confidence 455766654 4677889999999999999999994443332000 0011444 46899999999999
Q ss_pred HHHHHHHHHhcCC---CCCCCCCCCCCCCCCCC-----C-CC---------------CCccccccccccccCCCcccccc
Q 043321 126 QALTFFDAQKSGN---YPNYSPVKFRGNSGMQD-----G-KV---------------SNLNADLVGGFYDSGNNIKFSFP 181 (617)
Q Consensus 126 ~sL~Ff~aQRsG~---lp~~~~v~Wr~~s~l~D-----g-~~---------------~g~~~DlsGGWyDAGDy~Ky~~p 181 (617)
++|+||++||||. +|...++.||+++||.| | .+ .+..+||+|||||||||+||++|
T Consensus 107 ~sl~ff~~QRsG~~~~~p~~~~~~w~r~a~h~~~~~~~g~~D~~~~p~~~~~~~~~g~~~~~Dl~GGwyDAGD~~K~~~p 186 (609)
T 1ut9_A 107 DALAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGWYDAGDHGKYVVN 186 (609)
T ss_dssp HHHHHHHHTBSSSCBCTTTTSSGGGCBCCSSSSCTTCBCSSSEEBCCTTSTTCCSCCCCCEECCCCSBCCSSSSCEEHHH
T ss_pred HHHHHHHHHhcCCcccCcccCCccccccccCccccccccccccccccccccccccCCCCceecCCCCeeeCCCCCeecCc
Confidence 9999999999996 56666788998777665 0 00 12378999999999999999999
Q ss_pred hhHHHHHHHHHHHHhHH-------HHh--------hcCChhHHHHHHHHHHHHHHhhCCCCCC------Cc--cCcccCC
Q 043321 182 TAYAVTILSWSVIEYQE-------KYA--------EIGELNHVKDIIKWGSDYLLKVGSTGND------TK--VSNDINC 238 (617)
Q Consensus 182 ~A~sv~~L~wa~~e~~~-------~~~--------~~~~~pdiLdEikWglD~Llkmgd~~~g------~~--~~~Dh~~ 238 (617)
||+++++|++.|++++. .|. .+|++||||||||||+|||||||++++. .+ ...||.+
T Consensus 187 ~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~~g~~~~~~g~v~~~~~D~~w 266 (609)
T 1ut9_A 187 GGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVTEKEDPSIAGMVHHKIHDFRW 266 (609)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCCTTTCGGGTTCEECEEEESSC
T ss_pred hHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccCCCCcceEEEEecCCCCCccc
Confidence 99999999988998764 242 3578999999999999999999987642 12 2346755
Q ss_pred c---CCCCCCCCCcceEecCCCchhHHHHHHHHHHHhcccCCC-ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCC
Q 043321 239 W---QRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKD-EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDA 314 (617)
Q Consensus 239 W---~~PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~vfk~-D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~ 314 (617)
| .|||+|+.+|++. ..++++++++|||||+||||||+ |++||++||++||++|+||++ +|+.|.+...
T Consensus 267 ~g~~~~Pe~~~~~R~~~---~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~-----~~~~y~~~~~ 338 (609)
T 1ut9_A 267 TALGMLPHEDPQPRYLR---PVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALK-----HPDIYAEYTP 338 (609)
T ss_dssp CCSSCCGGGCCSBEEEC---CEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH-----CTTCCBCCCC
T ss_pred CCCCCChhhCCCceeec---CCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHh-----Cccccccccc
Confidence 6 5899999999873 34788999999999999999999 999999999999999999999 9998873211
Q ss_pred -CCCCCCcccCCCcccchhHHHHHHHHHHhCChhHHHHHHHhhhccc---ccc-----c---cCCCcccccccHHHHHHH
Q 043321 315 -CGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERFKAAE---DEE-----T---ESEKGIFYWNNKLTATAV 382 (617)
Q Consensus 315 -~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd~~Yl~~a~~~~~~~~---~~~-----~---~~~~~~~~Wdn~~~~a~~ 382 (617)
.....+++|+|+++.||++|||+|||+||||++|+++++++....+ .+. . ......|+||+|..++++
T Consensus 339 ~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~Wd~~~~~~~~ 418 (609)
T 1ut9_A 339 GSGGPGGGPYNDDYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFTWGTTQGLGTI 418 (609)
T ss_dssp SSSSCBSCCCCBSCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCCSSCCHHHHHH
T ss_pred ccCccCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccchhhhHHHHHH
Confidence 1124578999999999999999999999999999999998643110 111 0 123457999999999999
Q ss_pred HhhhccccCCCCCchhhHHHHHHHHHHHHHHhhccC-Ccc-----cccCCcceeeCCCCCchHHHHHHHHHHHHHhhhhh
Q 043321 383 LLTRLRFFRDLGYPYEGALRSSSSRTEILMCSYLSD-HIF-----NKTQGGLILLRPGSGGALEFAATASFLSKLYSDYL 456 (617)
Q Consensus 383 lLa~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~Tp~Gl~~~~~w~~gsl~ya~n~a~l~~l~ad~~ 456 (617)
+|+.+...... .-.++.++.+++.++.++|..... +++ .+||+|+ .| |||+|++|++|+++++.++.
T Consensus 419 lla~~~~~l~~-~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~----~W--Gs~~~~~n~a~~~~~a~~~~ 491 (609)
T 1ut9_A 419 TLALVENGLPA-TDIQKARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGY----PW--GSNSFILNQMIVMGYAYDFT 491 (609)
T ss_dssp HHHHSCCSSCH-HHHHHHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSC----CT--THHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccccch-hHHHHHHHHHHHHHHHHHHhhccCCCCccccccccCCCCc----cc--ccCHHHHHHHHHHHHHHHhc
Confidence 99866432210 001345677888888888876554 222 3456777 46 99999999999988887742
Q ss_pred hhhhcCCCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcceEEeeCCCCCCCccccCCCCCCCC---CCcccccCCCccc
Q 043321 457 DLLRRSGGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDD---GQHYTCAEGDRWL 533 (617)
Q Consensus 457 ~~~~~p~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~SyVvG~G~~~P~~pHHR~ss~~~~~---~~~~~c~~g~~~~ 533 (617)
+..+|+++|++|||||||+||+++|||||||.|+|+|||||+++.+.++ .....|..|. .
T Consensus 492 ---------------~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l~Gg--p 554 (609)
T 1ut9_A 492 ---------------GDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGIISGG--P 554 (609)
T ss_dssp ---------------CCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCBCCC--C
T ss_pred ---------------ChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCCCCC--C
Confidence 4579999999999999999999999999999999999999986543320 1245666553 4
Q ss_pred cCCCCCCCCccceEeeCCCCCCCcccCCCCcccCcccccccHHHHHHHHHhcC
Q 043321 534 YSKEPNPNLLVGAMVAGPDIFDNFSDERDKPWFTEPSIASNAGLVAALIALHD 586 (617)
Q Consensus 534 ~~~~~n~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~lv~ala~l~~ 586 (617)
++..+||++ .|++||||+..|+|.|+|.+|++|||||||||+||++||+|.+
T Consensus 555 ~~~~~dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~ 606 (609)
T 1ut9_A 555 NSRFEDPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQ 606 (609)
T ss_dssp CTTCCSHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHh
Confidence 455566666 8999999999999999999999999999999999999999875
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=9.4e-67 Score=582.29 Aligned_cols=448 Identities=18% Similarity=0.182 Sum_probs=312.1
Q ss_pred ceeccccccCCCCCCCCCCCCCccceeeeeeeeeccchhhHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCChhH-HHH
Q 043321 45 STEIDFNLAPQSSNSYGSLPSRYSKSFDYDLVITDKAYFKRFLYISASAALLILALVLLIHFVPHKHHPHSPTKNL-TLA 123 (617)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~~Y-~~a 123 (617)
+.+++..+.+. ..++..++...+++||+.+..+|+|++. +++. +|.| |.|++++| ..+
T Consensus 42 ~~V~~G~~~~~--g~~~~~s~~~~~~~DFS~~~~pG~Y~L~-v~g~--------------~S~p----F~I~~~vy~~~~ 100 (586)
T 3h7l_A 42 QTVATFAVEEQ--GKVANWHQGYFYLIDFSSFTDSGDYFLQ-VEDS--------------RSST----FTVGEHILLNQT 100 (586)
T ss_dssp CEEEEEEEEEE--ECCTTCTTCEEEEEECTTCCCCEEEEEE-ETTE--------------ECCC----EEEETTHHHHHH
T ss_pred CEEEEEeecCC--ccccccCCCcEEEEEccCCCCCceEEEE-ECCc--------------eeCC----eEEccchhhHHH
Confidence 34557777765 3345667888999999999999996643 3331 4444 68999997 899
Q ss_pred HHHHHHHHHHHhcCCC--CCCCCCCCCCCCCCCCCCCCCcccccccccccc-CCCcccccchhHHH-------HHHHHHH
Q 043321 124 VNQALTFFDAQKSGNY--PNYSPVKFRGNSGMQDGKVSNLNADLVGGFYDS-GNNIKFSFPTAYAV-------TILSWSV 193 (617)
Q Consensus 124 l~~sL~Ff~aQRsG~l--p~~~~v~Wr~~s~l~Dg~~~g~~~DlsGGWyDA-GDy~Ky~~p~A~sv-------~~L~wa~ 193 (617)
|.++|+||++||||.+ +.+.+++|+++ +..+||+|||||| |||+||++|||||+ ++|+|++
T Consensus 101 l~~sl~ff~~QRsG~~~~~~d~~~~~~~~---------~~~~Dl~GGwyDAsGD~~Ky~~~~a~t~~~npqQ~~~~~w~l 171 (586)
T 3h7l_A 101 LSDVIHYFKSQRCGGVFDQQDRQVPVLNA---------NQTADVHGGWYDASGDVSKYLSHLSYANYLNPQQTPMVVWNI 171 (586)
T ss_dssp HHHHHHHHHHTBCCHHHHHHTTSEEETTT---------TEEECCCCSBCSBTTBCCEESCCCGGGSSCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCceeeecCC---------CceeecccccccCCCCcceeccchhhhhhcccchhhHHHHHH
Confidence 9999999999999974 56778899864 3378999999999 99999999999987 5788888
Q ss_pred HHhHHHHhhcC-----ChhHHHHHHHHHHHHHHhhCCCCCCCccCcccCCcCCCCCCCCCcce--E-----------ecC
Q 043321 194 IEYQEKYAEIG-----ELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPV--S-----------VCD 255 (617)
Q Consensus 194 ~e~~~~~~~~~-----~~pdiLdEikWglD~Llkmgd~~~g~~~~~Dh~~W~~PEd~~~~R~v--~-----------~~s 255 (617)
+++.+.+.+.. ++||||||||||+||||||++++++....+ +..|.. + +.+|.+ + .+.
T Consensus 172 l~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~~g~~y~qV-gd~W~~--d-~~~R~~~~~~~~~~~~~~~y~~~ 247 (586)
T 3h7l_A 172 LKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNEKGFFYMTV-FDKWSK--D-TAQREICAYETQLGHKFDDYQAG 247 (586)
T ss_dssp HHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCTTSCBBCEE-ECTTCC--C-GGGCEEEEEETTTTEEESCCBCC
T ss_pred HHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccCCCeEEEEe-cCCCCC--C-CCccccccccCCCCCCCcceecC
Confidence 87777665432 289999999999999999999865432222 223753 2 445654 2 222
Q ss_pred CCchhHHHHHHHHHHHhcccCCCChhH-HHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchh--
Q 043321 256 STASDLAGEIIAALSAASIVFKDEIMY-SGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDEL-- 332 (617)
Q Consensus 256 ~~gsdlaa~~AAALAaAS~vfk~D~~y-A~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~-- 332 (617)
. +..++++|||||+|||||+ |++| +++||++|+++|+||++ +|+.|. .. +++++.||+
T Consensus 248 ~--~~~agl~aAALA~Asrvf~-d~~~~a~~~L~aA~~a~~fa~~-----~~~~y~---~~--------g~~~~~De~~~ 308 (586)
T 3h7l_A 248 F--RQGGGVAIAALAAASRLGV-HGEYDQQKYRNAAENGYWHLKE-----HNTQYL---ND--------GEENIIDEYCA 308 (586)
T ss_dssp G--GGTHHHHHHHHHHHTTSSS-CSSSCHHHHHHHHHHHHHHHHH-----HHHHHS---TT--------SCCCHHHHHHH
T ss_pred C--CCcHHHHHHHHHHHhcccC-CCCcChHHHHHHHHHHHHHHHh-----cCcccc---CC--------CCccchhHHHH
Confidence 1 2337789999999999999 7889 99999999999999999 887775 21 136789999
Q ss_pred HHHHHHHHHHhCChhHHHHHHHhhhccc-cccccCCCccccccc------------HHHHHHHHhhhccccCCCCCchhh
Q 043321 333 VWGGTWLFFATGNNSYLAYATERFKAAE-DEETESEKGIFYWNN------------KLTATAVLLTRLRFFRDLGYPYEG 399 (617)
Q Consensus 333 ~WAAaeLy~ATGd~~Yl~~a~~~~~~~~-~~~~~~~~~~~~Wdn------------~~~~a~~lLa~~~~~~~~~~p~~~ 399 (617)
+|||+|||+|||+.+||+++........ .+. ......|.|.+ ...++.+.|+++.......--.+.
T Consensus 309 ~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~-~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~ 387 (586)
T 3h7l_A 309 LLASVELFKATKETRYLEESRLWAQRLVARQM-SDEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTES 387 (586)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEE-CCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc-CCccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHH
Confidence 9999999999999999999998653111 111 11234577874 444455444443221111001234
Q ss_pred HHHHHHHHHHHHHH--h-----------hccC-CcccccCCcceeeCC--CCC-chHHHHHHHHHHHHHhhhhhhhhhcC
Q 043321 400 ALRSSSSRTEILMC--S-----------YLSD-HIFNKTQGGLILLRP--GSG-GALEFAATASFLSKLYSDYLDLLRRS 462 (617)
Q Consensus 400 ~~~~~~~~~~~~~~--~-----------~~~~-~~~~~Tp~Gl~~~~~--w~~-gsl~ya~n~a~l~~l~ad~~~~~~~p 462 (617)
+++.+++.++..+. . +++. ....++..++...+. ..| |+|++++|.|++++++++++...
T Consensus 388 a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~~~~~--- 464 (586)
T 3h7l_A 388 VKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWWQGENARLGSLATMAYLAQPHIASQ--- 464 (586)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCCCCCHHHHHHHHHHHHHSGGGCCCH---
T ss_pred HHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCeeeChHHHHHHHHHHHHHHHHhcCCc---
Confidence 44455555443221 1 1100 011112222222221 235 99999999999999999864210
Q ss_pred CCCCCCCCCCHHHHHHHHHhhchhhccCCCCCcceEEeeCCCCCCCccccCCCCCCCCCCcccccCCCccccCCCCCCCC
Q 043321 463 GGSCGNDGFSLQMLRRFSISQVHYILGDNPMKMSYMVGFGDKYPYQVHHRSASIPWDDGQHYTCAEGDRWLYSKEPNPNL 542 (617)
Q Consensus 463 ~~~c~~~~~~~~~y~~~A~~qidYiLG~NP~g~SyVvG~G~~~P~~pHHR~ss~~~~~~~~~~c~~g~~~~~~~~~n~~~ 542 (617)
....+|+++|++|||||||+||+++|||||||.|+|+ ||.+.. + + +
T Consensus 465 --------~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~~-------------~---------~-~ 510 (586)
T 3h7l_A 465 --------EIQQQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQYG-------------F---------F-N 510 (586)
T ss_dssp --------HHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGGT-------------B---------C-C
T ss_pred --------hhHHHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCcccC-------------C---------C-C
Confidence 0138999999999999999999999999999999876 786421 0 1 2
Q ss_pred ccceEeeCCCCC--C----------CcccCCCCcccCcccccccHHHHHHHHH
Q 043321 543 LVGAMVAGPDIF--D----------NFSDERDKPWFTEPSIASNAGLVAALIA 583 (617)
Q Consensus 543 l~GaLVGGPn~~--d----------~y~D~r~~y~~NEvaId~NA~lv~ala~ 583 (617)
+||.|||||+.. | +..|.-.+|.-+|--|==-|=+..+++.
T Consensus 511 ~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~a~~~ 563 (586)
T 3h7l_A 511 AKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAIMS 563 (586)
T ss_dssp CTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCcCChhhHhcCccccccccccCcccHhhccchHHHHHHHHHH
Confidence 799999999853 1 2335567888888877655544444443
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.32 E-value=0.073 Score=55.86 Aligned_cols=149 Identities=11% Similarity=-0.008 Sum_probs=78.6
Q ss_pred hHHHHHHHHHHHHhHHHHhhcCChhHHHHHHHHHHHHHHh-hCCCCCCCccCcccCCcCCCCCCCCCcceEecCCCchhH
Q 043321 183 AYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLK-VGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDL 261 (617)
Q Consensus 183 A~sv~~L~wa~~e~~~~~~~~~~~pdiLdEikWglD~Llk-mgd~~~g~~~~~Dh~~W~~PEd~~~~R~v~~~s~~gsdl 261 (617)
.+.-..|+|++.+ +|...-+-|..++.++-+++||++ |.++++|.....|-. +.|.+. .+ ..-+
T Consensus 52 l~~nar~i~~~a~---a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~d--g~~~~~--~~-------~~~~- 116 (388)
T 2gz6_A 52 IWLQNRQVWTFSM---LCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALTRG--GEPLVQ--PY-------NIFS- 116 (388)
T ss_dssp HHHHHHHHHHHHH---HHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECTT--SCBCCC--CC-------CHHH-
T ss_pred HHHHHHHHHHHHH---HHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CCcccC--Cc-------chHH-
Confidence 3444455555543 232212457899999999999999 677654322111110 112110 11 1112
Q ss_pred HHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHH
Q 043321 262 AGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFF 341 (617)
Q Consensus 262 aa~~AAALAaAS~vfk~D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ 341 (617)
-|-++.+|+.++++.. |+ +.|+.|++++++..+.-. ...+.|.. ..+.. ..+...+..--+++|.+.||+
T Consensus 117 ~af~i~al~~~y~~tg-~~----~~l~~A~~~~~~i~~~~~-d~~g~~~~---~~~~~-~~~~~~~~~~~~~~all~l~~ 186 (388)
T 2gz6_A 117 DCFAAMAFSQYALASG-EE----WAKDVAMQAYNNVLRRKD-NPKGKYTK---TYPGT-RPMKALAVPMILANLTLEMEW 186 (388)
T ss_dssp HHHHHHHHHHHHHHHC-CH----HHHHHHHHHHHHHHTC------------------C-CCCEETHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHHhC-CH----HHHHHHHHHHHHHHHHhc-CCCcccCc---ccCCC-CCCCCCCHHHHHHHHHHHHHH
Confidence 3457777888788765 44 457788888888776300 01122221 00000 011111111135678899999
Q ss_pred HhCChhHHHHHHHhh
Q 043321 342 ATGNNSYLAYATERF 356 (617)
Q Consensus 342 ATGd~~Yl~~a~~~~ 356 (617)
+|++..|++.+.+..
T Consensus 187 ~t~d~~~~~~A~~~~ 201 (388)
T 2gz6_A 187 LLPQETLENVLAATV 201 (388)
T ss_dssp GSCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHH
Confidence 999999999888654
No 12
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=94.98 E-value=0.9 Score=48.21 Aligned_cols=131 Identities=15% Similarity=0.083 Sum_probs=63.6
Q ss_pred ChhHHHHHHHHHHHHHHh-hCCCCCCCccCcccCCcCCCCCCCCCcceEecCCCchhHHHHHHHHHHHhcccCCCChhHH
Q 043321 205 ELNHVKDIIKWGSDYLLK-VGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYS 283 (617)
Q Consensus 205 ~~pdiLdEikWglD~Llk-mgd~~~g~~~~~Dh~~W~~PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~vfk~D~~yA 283 (617)
+.|..|+.++-+++||++ |.|++.|+ -+|... + -+++-. ....-+. |-++-||+.+.+. .|+.
T Consensus 69 g~~~~l~~A~~~~~fl~~~~~d~~~Gg------~~~~~~-d---G~~~~~-~~~lyd~-Af~i~al~~~~~t--gd~~-- 132 (402)
T 3gt5_A 69 GTAEYLDAVHHGLSYVRDVHRNPATGG------YAWTLC-D---DRVEDD-TNHCYGL-AFVMLAYSCGLKV--GIKQ-- 132 (402)
T ss_dssp CCHHHHHHHHHHHHHHHHTTBCTTTSC------BCSEEE-T---TEEEEC-CEEHHHH-HHHHHHHHHHHHT--TCTT--
T ss_pred CChHHHHHHHHHHHHHHHhCccCCCCc------EEEEee-C---CCCCcC-CcchHHH-HHHHHHHHHHHHh--CChh--
Confidence 458999999999999998 66654221 112221 1 122100 0011122 2233334442221 2655
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccch--hHHHHHHHHHHhCChhHHHHHHHhh
Q 043321 284 GELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDE--LVWGGTWLFFATGNNSYLAYATERF 356 (617)
Q Consensus 284 ~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE--~~WAAaeLy~ATGd~~Yl~~a~~~~ 356 (617)
.|+.|++++++..+.-+....|.|...-..... ...|.+ ..+- ++-|.+.||.+||+..|++.+....
T Consensus 133 --~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~-~~~~~~--~n~~m~l~eall~L~~~tgd~~~~~~a~~l~ 202 (402)
T 3gt5_A 133 --AREWMDETWCLLERHFWDAEYGLYKDEADAQWN-FTRYRG--QNANMHMCEAMLAAYEASGEQRYLERALVLA 202 (402)
T ss_dssp --HHHHHHHHHHHHHHHTEETTTTEECCEECTTCC-BCSCEE--HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCC-CCCCCC--CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 455666677666652000012333200000000 011111 1122 4557899999999999999988643
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=94.78 E-value=0.34 Score=50.84 Aligned_cols=68 Identities=24% Similarity=0.358 Sum_probs=45.5
Q ss_pred HHHHHHHhcccCCCChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHH---HHHHHHH
Q 043321 265 IIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVW---GGTWLFF 341 (617)
Q Consensus 265 ~AAALAaAS~vfk~D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~W---AAaeLy~ 341 (617)
+-.+|.-++++.. |++ +++.|+++..+.+.. +.+.+ . .++.||..| |.+.+|+
T Consensus 51 ~~~~l~d~~~~tg-d~~----y~~~a~~~~~~~~~~----~~~~~---------~------~~~~DD~a~~~la~~~aye 106 (349)
T 3k7x_A 51 LVEVRLDAYLRTK-KQA----DLEVAEKTYLHNKNR----NGGTL---------I------HDFYDDMLWNALAAYRLYK 106 (349)
T ss_dssp HHHHHHHHHHHHC-CHH----HHHHHHHHHHHHHHH----TTSSS---------C------CSBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CHH----HHHHHHHHHHHHHhc----CCCCC---------C------ccCccHHHHHHHHHHHHHH
Confidence 3588888888876 554 456666666665552 21111 0 123466655 8899999
Q ss_pred HhCChhHHHHHHHhh
Q 043321 342 ATGNNSYLAYATERF 356 (617)
Q Consensus 342 ATGd~~Yl~~a~~~~ 356 (617)
+||+++||+.++...
T Consensus 107 ~t~~~~yL~~A~~l~ 121 (349)
T 3k7x_A 107 ATGKSIYLEDAQLVW 121 (349)
T ss_dssp HHCCHHHHHHHHHHH
T ss_pred HHCCchHHHHHHHHH
Confidence 999999999988654
No 14
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=94.40 E-value=0.91 Score=47.39 Aligned_cols=87 Identities=11% Similarity=-0.029 Sum_probs=53.7
Q ss_pred hhHHHHHHHHHHHhccc-CCCChhHHHHHHHHHHHHHHHHhccCCCCCCC-ccccc-CCCCCCCCcccCCCcc-cc--hh
Q 043321 259 SDLAGEIIAALSAASIV-FKDEIMYSGELIKAAGKLYEVTSREDPGRKQG-IYTKV-DACGGEARDYYNSTSF-ID--EL 332 (617)
Q Consensus 259 sdlaa~~AAALAaAS~v-fk~D~~yA~klL~~A~~ay~fA~~~~~~~~p~-~y~~~-~~~~~~~~g~Y~ss~~-~D--E~ 332 (617)
....|.++.++|.|+++ ++ ++. +++.|++..+|..+.-.. ..| .|... .++.+. ..... .| =+
T Consensus 52 l~~nar~i~~~a~a~~~~~~-~~~----~~~~A~~~~~~l~~~~~~-~~Gg~~~~~d~dg~~~-----~~~~~~~~~af~ 120 (388)
T 2gz6_A 52 IWLQNRQVWTFSMLCNQLEK-REN----WLKIARNGAKFLAQHGRD-DEGNWYFALTRGGEPL-----VQPYNIFSDCFA 120 (388)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-CHH----HHHHHHHHHHHHHHHSBC-TTSCBCSEECTTSCBC-----CCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC-CHH----HHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCCCcc-----cCCcchHHHHHH
Confidence 34478999999999999 55 554 677788888887773100 012 22210 011100 00111 12 24
Q ss_pred HHHHHHHHHHhCChhHHHHHHHhh
Q 043321 333 VWGGTWLFFATGNNSYLAYATERF 356 (617)
Q Consensus 333 ~WAAaeLy~ATGd~~Yl~~a~~~~ 356 (617)
++|.+++|++||+..|++.|.+..
T Consensus 121 i~al~~~y~~tg~~~~l~~A~~~~ 144 (388)
T 2gz6_A 121 AMAFSQYALASGEEWAKDVAMQAY 144 (388)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 678889999999999999988754
No 15
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=90.78 E-value=4.2 Score=42.64 Aligned_cols=72 Identities=11% Similarity=-0.000 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccch--hHHHHHHH
Q 043321 262 AGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDE--LVWGGTWL 339 (617)
Q Consensus 262 aa~~AAALAaAS~vfk~D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE--~~WAAaeL 339 (617)
.|-+..+|+.++++.+ |+. +++.|++..++.... .+... |. ... -|+ +.++.++|
T Consensus 43 ~G~~~~gl~~~y~~tg-d~~----y~~~a~~~~~~~~~~--~g~l~-~~--------------~~~-lDd~~~g~~ll~l 99 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATG-EKR----YFEYAKAYADLLIDD--NGNLL-FR--------------RDE-LDAIQAGLILFPL 99 (373)
T ss_dssp HHHHHHHHHHHHHHHC-CHH----HHHHHHHHHHHHBCT--TCCBC-CC--------------TTC-GGGTGGGGGHHHH
T ss_pred HHHHHHHHHHHHHHhC-CHH----HHHHHHHHHHHHhCC--CCccc-CC--------------CCC-cchHHHHHHHHHH
Confidence 3456777888999887 554 555566665654331 00111 21 111 222 46789999
Q ss_pred HHHhCChhHHHHHHHhh
Q 043321 340 FFATGNNSYLAYATERF 356 (617)
Q Consensus 340 y~ATGd~~Yl~~a~~~~ 356 (617)
|++||+++|++.+....
T Consensus 100 Y~~Tgd~~yl~~a~~la 116 (373)
T 1nc5_A 100 YEQTKDERYVKAAKRLR 116 (373)
T ss_dssp HHHHCCHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHH
Confidence 99999999999988754
No 16
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=90.54 E-value=3.3 Score=43.44 Aligned_cols=63 Identities=17% Similarity=0.134 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHH---HHHHHHhCChhHHHHHHHhh
Q 043321 285 ELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGG---TWLFFATGNNSYLAYATERF 356 (617)
Q Consensus 285 klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAA---aeLy~ATGd~~Yl~~a~~~~ 356 (617)
++++.|+++.++... +|.. . .+.-.....|....|.|.++++. ++|++.|||.+|++.|...+
T Consensus 107 ~yl~~a~~la~~l~~-----~~r~-~---~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~ 172 (373)
T 1nc5_A 107 RYVKAAKRLRSLYGT-----LNRT-S---EGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQE 172 (373)
T ss_dssp HHHHHHHHHHGGGGT-----SCBC-T---TSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-----ccCC-C---CCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 467778888777765 4410 0 11000111223345678876655 68889999999999998754
No 17
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=89.08 E-value=0.8 Score=48.02 Aligned_cols=126 Identities=14% Similarity=0.022 Sum_probs=73.1
Q ss_pred ChhHHHHHHHHHHHHH-HhhCCC-CCCCccCcccCCcCCCCCCCCCcceEecCCCchhHHHHHHHHHHHhcccCCCChhH
Q 043321 205 ELNHVKDIIKWGSDYL-LKVGST-GNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMY 282 (617)
Q Consensus 205 ~~pdiLdEikWglD~L-lkmgd~-~~g~~~~~Dh~~W~~PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~vfk~D~~y 282 (617)
+-+..|+.++-..++| .+--+. .+|+ -.|..+. ..++.. -..+.++.++|..++++. |+
T Consensus 109 ~~~~yL~~A~~l~~~l~~~~wd~~~gGG------i~W~~~~------~~~kna----isN~~~~~~la~l~~~tg-d~-- 169 (349)
T 3k7x_A 109 GKSIYLEDAQLVWQDLVDTGWNDIMGGG------FAWRRPQ------MYYKNT----PVNAPFIILSCWLYNELN-ET-- 169 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCSGGGSC------BEEETTE------EEEEEH----HHHHHHHHHHHHHHHHHC-CH--
T ss_pred CCchHHHHHHHHHHHHHHhCCCCCCCCc------eEecCCC------ccccch----hhHHHHHHHHHHHHHHhC-CH--
Confidence 5578899999999998 442232 1221 2465421 122221 124567777777788776 44
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCC-CcccccCCCCCCCCcccCC--Cccc---chhHHHHHHHHHHhCChhHHHHHHHhh
Q 043321 283 SGELIKAAGKLYEVTSREDPGRKQ-GIYTKVDACGGEARDYYNS--TSFI---DELVWGGTWLFFATGNNSYLAYATERF 356 (617)
Q Consensus 283 A~klL~~A~~ay~fA~~~~~~~~p-~~y~~~~~~~~~~~g~Y~s--s~~~---DE~~WAAaeLy~ATGd~~Yl~~a~~~~ 356 (617)
++++.|+++|+|.+++-. .+ +.+. ++.......+.+ ..|. --+++|+++||++||+++|++.+.+..
T Consensus 170 --~Yl~~A~~~~~w~~~~l~--d~~g~v~---Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 170 --KYLEWAMKTYEWQTKVLV--REDGFVE---DGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp --HHHHHHHHHHHHHHHHHB--CTTSCBC---CEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHhcCC--CCCCeEe---cCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 478889999999876310 11 2232 211100001111 0111 247899999999999999999988754
No 18
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=87.16 E-value=0.86 Score=48.81 Aligned_cols=130 Identities=12% Similarity=-0.000 Sum_probs=74.9
Q ss_pred hhHHHHHHHHHHHHHHh-hCCCCCCCccCcccCCcCCCCCCCCCcceEecCCCchhHHHHHHHHHHHhcccCCCChhHHH
Q 043321 206 LNHVKDIIKWGSDYLLK-VGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSG 284 (617)
Q Consensus 206 ~pdiLdEikWglD~Llk-mgd~~~g~~~~~Dh~~W~~PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~vfk~D~~yA~ 284 (617)
-+..++.+.=..|+|+. + ++.+|. ..-|+.-.+. .+. -..++ +.....+|+-|++++. |+.|.+
T Consensus 132 ~~~~~~~~~~aA~~L~~r~-~~~~g~-----iqsw~~~~~~-~~~-~~iID------~~mni~~L~~A~~~~g-d~~y~~ 196 (397)
T 2zzr_A 132 DVKALEATIKAADKLMERY-QEKGGF-----IQAWGELGYK-EHY-RLIID------CLLNIQLLFFAYEQTG-DEKYRQ 196 (397)
T ss_dssp CHHHHHHHHHHHHHHHTTE-ETTTTE-----ECCSSSTTCG-GGC-EEETT------HHHHTHHHHHHHHHHC-CHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHh-CcCCCE-----EEecccCCCC-CCC-ceeec------hHhHHHHHHHHHHHhC-CHHHHH
Confidence 35677888888888876 4 333221 2234421111 111 22344 3446789999999987 777877
Q ss_pred HHHHHHHHHHHHHhccCCCCCCC-cccccC-CC-CCCCCcccCCCcccch---------hHHHHHHHHHHhCChhHHHHH
Q 043321 285 ELIKAAGKLYEVTSREDPGRKQG-IYTKVD-AC-GGEARDYYNSTSFIDE---------LVWGGTWLFFATGNNSYLAYA 352 (617)
Q Consensus 285 klL~~A~~ay~fA~~~~~~~~p~-~y~~~~-~~-~~~~~g~Y~ss~~~DE---------~~WAAaeLy~ATGd~~Yl~~a 352 (617)
...++|...-+.... ..+ .|+... +. .+.......-.++.|| +++|.++||++|+|..||+.|
T Consensus 197 ~A~~ha~~~l~~~~r-----~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A 271 (397)
T 2zzr_A 197 VAVNHFYASANNVVR-----DDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILF 271 (397)
T ss_dssp HHHHHHHHHHHHTBC-----TTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHhCcC-----CCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 777777777666543 111 222100 10 0000000112355566 467889999999999999998
Q ss_pred HHh
Q 043321 353 TER 355 (617)
Q Consensus 353 ~~~ 355 (617)
...
T Consensus 272 ~~l 274 (397)
T 2zzr_A 272 KGM 274 (397)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 19
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=86.94 E-value=7.7 Score=40.95 Aligned_cols=173 Identities=12% Similarity=0.066 Sum_probs=84.6
Q ss_pred ccccccc--CCCcccccchhHHHHHHHHHHHHhHHHHhhcCChhHHHHHHHHHHHHHHh-hCCCCCCCccCcccCCcCC-
Q 043321 166 VGGFYDS--GNNIKFSFPTAYAVTILSWSVIEYQEKYAEIGELNHVKDIIKWGSDYLLK-VGSTGNDTKVSNDINCWQR- 241 (617)
Q Consensus 166 sGGWyDA--GDy~Ky~~p~A~sv~~L~wa~~e~~~~~~~~~~~pdiLdEikWglD~Llk-mgd~~~g~~~~~Dh~~W~~- 241 (617)
.|||+++ +|...-..+...+...|+-++.+..... + -+..++.++.-++.+++ +-++++|.+...-..-|..
T Consensus 153 ~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~t---g-d~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~ 228 (402)
T 3gt5_A 153 YGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEAS---G-EQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVD 228 (402)
T ss_dssp TTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHH---C-CHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBC
T ss_pred CCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhh---C-CHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCc
Confidence 4777753 3322111134444444444444333222 2 36788888888888876 4454433221111112432
Q ss_pred CC----C-CCCCcceEecCCCchhHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHHHhccCCCC-CCCccc-ccCC
Q 043321 242 PE----D-MSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGR-KQGIYT-KVDA 314 (617)
Q Consensus 242 PE----d-~~~~R~v~~~s~~gsdlaa~~AAALAaAS~vfk~D~~yA~klL~~A~~ay~fA~~~~~~~-~p~~y~-~~~~ 314 (617)
++ + ....|+ +.++ +|. ..|.+--|-.++++.. ++. +++.|+++++++.+..+.. +.+.+. .+.+
T Consensus 229 ~~~~~~~~~~~~~~-~~~~-pGH--~iE~awlLl~~~~~~~-~~~----~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~ 299 (402)
T 3gt5_A 229 WDYNRDNPKHLFRP-WGFQ-PGH--QTEWAKLLLILDRYIE-VEW----LVPVARSLFDVAVARSWDAVRGGLCYGFAPD 299 (402)
T ss_dssp TTTTTTSTTCSSSC-SSBC-HHH--HHHHHHHHHHHHHHCC-CTT----HHHHHHHHHHHHHHHHBCTTTCSBCSEECTT
T ss_pred cccccCCcccccCc-CCCC-CCh--HHHHHHHHHHHHHhhC-cHH----HHHHHHHHHHHHHHhcccCCCCcEEEEEcCC
Confidence 10 0 001122 1122 343 3456666666666654 433 7777777777775521111 122221 1111
Q ss_pred CCCCCCcccCCCcc--cchhHHHHHHHHHHhCChhHHHHHHHh
Q 043321 315 CGGEARDYYNSTSF--IDELVWGGTWLFFATGNNSYLAYATER 355 (617)
Q Consensus 315 ~~~~~~g~Y~ss~~--~DE~~WAAaeLy~ATGd~~Yl~~a~~~ 355 (617)
+ ...=.+..+ .-|.+-|++.||+.|||+.|++.+.+.
T Consensus 300 g----~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~ 338 (402)
T 3gt5_A 300 G----TICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRL 338 (402)
T ss_dssp S----CEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred C----CeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 1 000011111 237777899999999999999988764
No 20
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=86.46 E-value=12 Score=40.58 Aligned_cols=160 Identities=13% Similarity=0.062 Sum_probs=81.5
Q ss_pred hHHHHHHHHHHHHHHh-----hCCCCCCCccCcccCCcCCCCCCCCCcceEecCCCchhHHHHHHHHHHHhcccCCCChh
Q 043321 207 NHVKDIIKWGSDYLLK-----VGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIM 281 (617)
Q Consensus 207 pdiLdEikWglD~Llk-----mgd~~~g~~~~~Dh~~W~~PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~vfk~D~~ 281 (617)
..|..-|+.-+++|.+ +.|..+|.+ ..|...|. .+..-++-.+..- +---|-+-.+|+.+++++++ +.
T Consensus 30 ~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~---~y~~Gv~l~gl~~ay~~Tgd-~k 102 (445)
T 3k11_A 30 EQVKKDIDRVFAYIDKETPARVVDKNTGKV-ITDYTAMG--DEAQLERGAFRLA---SYEWGVTYSALIAAAETTGD-KR 102 (445)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCEEETTTCCE-ECCTTTCC--TTEEECCCSSCTT---SHHHHHHHHHHHHHHHHHCC-HH
T ss_pred HHHHHHHHHHHHHHhccCcceeecCCCCce-eccccccc--cccccccCCcccC---ccCHHHHHHHHHHHHHHHCC-HH
Confidence 5677788888899999 666543322 23333332 2111111122211 11135688999999999984 33
Q ss_pred HHHHHHHHHHHHHHHHhcc--------C-CCCCCCcccccCCCCCCCCcccCCCcccchh---HHHHHHHHHHhCChhHH
Q 043321 282 YSGELIKAAGKLYEVTSRE--------D-PGRKQGIYTKVDACGGEARDYYNSTSFIDEL---VWGGTWLFFATGNNSYL 349 (617)
Q Consensus 282 yA~klL~~A~~ay~fA~~~--------~-~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~---~WAAaeLy~ATGd~~Yl 349 (617)
+++.|++..+|..+. + .|....+|. .+ +. .++.||. +|+-.+||++|++.+|+
T Consensus 103 ----Y~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r---------~~-~~-~~~LDD~g~~~~~Li~lY~~T~d~~yl 167 (445)
T 3k11_A 103 ----YTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLL---------QI-LT-PHALDDAGAVCTAMIKLRLKDESLPVD 167 (445)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHH---------HH-HS-CCSGGGTHHHHHHHHHHHHHCTTCCCH
T ss_pred ----HHHHHHHHHHHHHhccchhhhhhhccCCeecccc---------cc-cC-CCcchhHHHHHHHHHHHHHhcCCHHHH
Confidence 333333333333220 0 000000111 01 11 3344554 48999999999999999
Q ss_pred HHHHHhhh----cc--ccccccC---CCcccccccHHHHHHHHhhhcc
Q 043321 350 AYATERFK----AA--EDEETES---EKGIFYWNNKLTATAVLLTRLR 388 (617)
Q Consensus 350 ~~a~~~~~----~~--~~~~~~~---~~~~~~Wdn~~~~a~~lLa~~~ 388 (617)
+.+..... .. .+.++.. ....-.|.+...++..+|++..
T Consensus 168 ~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~ 215 (445)
T 3k11_A 168 GLIQNYFDFIINKEYRLADGTFARNRPQRNTLWLDDMFMGIPAVAQMS 215 (445)
T ss_dssp HHHHHHHHHHHHTSCBCTTCCBCBCSSSTTEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCceeecCCCCCceEecchhhHHHHHHHHH
Confidence 99986432 10 1111111 1122358887766665665543
No 21
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=84.88 E-value=8.6 Score=40.92 Aligned_cols=118 Identities=19% Similarity=0.178 Sum_probs=75.5
Q ss_pred CChhHHHHHHHHHHHHHHhhCCCCCCCccCcccCCcCCCCCCCCCcceEecCCCchhHHHHHHHHHHHhcccCCCChhHH
Q 043321 204 GELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYS 283 (617)
Q Consensus 204 ~~~pdiLdEikWglD~Llkmgd~~~g~~~~~Dh~~W~~PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~vfk~D~~yA 283 (617)
-+.+.+++.|+=.++|+++.+..+ | .|........++.+..|. | +.-++-++..+++++. |++|.
T Consensus 247 ~~~~~~~~~i~~~l~~l~~~~~~~-g--------~wp~~~~~~~~~~~~wCh--G---~~Gi~~~l~~~~~~~~-~~~~~ 311 (411)
T 3e6u_A 247 VSQGKLHSLVKPSVDYVCQLKFPS-G--------NYPPCIGDNRDLLVHWCH--G---APGVIYMLIQAYKVFR-EEKYL 311 (411)
T ss_dssp CCHHHHHHTHHHHHHHHHHTCCTT-S--------CCCSBTTCCCCCCCSSSS--S---HHHHHHHHHHHHHHHC-CHHHH
T ss_pred cChHHHHHHHHHHHHHHHHhhccC-C--------CCCCCCCcccCccccccC--C---cHHHHHHHHHHHHHcC-CHHHH
Confidence 345788999999999999987652 1 242111112234455555 3 3446777888888886 67787
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhCChhHHHHHHHhh
Q 043321 284 GELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAYATERF 356 (617)
Q Consensus 284 ~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd~~Yl~~a~~~~ 356 (617)
+.+.+.++.+|+...-. ..++..+ + .++ ..+.-..||+.|++..|++.|....
T Consensus 312 ~~a~~~~~~~~~~g~~~---~~~~lCh------G-------~aG----~~~~ll~~~~~t~~~~~~~~A~~~~ 364 (411)
T 3e6u_A 312 CDAYQCADVIWQYGLLK---KGYGLCH------G-------SAG----NAYAFLTLYNLTQDMKYLYRACKFA 364 (411)
T ss_dssp HHHHHHHHHHHHHCSBT---TCSCSTT------S-------HHH----HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccC---CCCceec------C-------hHH----HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 77777888887753210 0233222 1 111 2667788999999999999888754
No 22
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=84.59 E-value=0.99 Score=47.96 Aligned_cols=131 Identities=16% Similarity=0.036 Sum_probs=73.7
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCCCccCcccCCcCCCCCCCCCcceEecCCCchhHHHHHHHHHHHhcccCCCChhHHHHH
Q 043321 207 NHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKDEIMYSGEL 286 (617)
Q Consensus 207 pdiLdEikWglD~Llkmgd~~~g~~~~~Dh~~W~~PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~vfk~D~~yA~kl 286 (617)
+..++.+.=..|+|+.==++.+|. ..-|+.-.+.. ......++ +..+..+|+-|++++. |+.|.+..
T Consensus 107 ~~~~~~~~~aA~~L~~r~~~~~g~-----i~sw~~~~~~~-~~~~~iID------~mmni~~L~~A~~~~g-d~~y~~~A 173 (377)
T 2ahf_A 107 ESARKLALDAADVLMRRWRADAGI-----IQAWGPKGDPE-NGGRIIID------CLLNLPLLLWAGEQTG-DPEYRRVA 173 (377)
T ss_dssp HHHHHHHHHHHHHHHTTEETTTTE-----ECCBSSTTCTT-TTTEEEGG------GGGGHHHHHHHHHHHC-CTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCe-----EEeccCCCCCC-CCceEEec------hHHHHHHHHHHHHHhC-CHHHHHHH
Confidence 467777777888888621232221 22354311111 11123444 2345889999999987 67777777
Q ss_pred HHHHHHHHHHHhccCCCCCCC-cccccC-CC-CCCCCcccCCCcccch---------hHHHHHHHHHHhCChhHHHHHHH
Q 043321 287 IKAAGKLYEVTSREDPGRKQG-IYTKVD-AC-GGEARDYYNSTSFIDE---------LVWGGTWLFFATGNNSYLAYATE 354 (617)
Q Consensus 287 L~~A~~ay~fA~~~~~~~~p~-~y~~~~-~~-~~~~~g~Y~ss~~~DE---------~~WAAaeLy~ATGd~~Yl~~a~~ 354 (617)
.++|+.+-+.... ..+ .|+... +. .+.......-.++.|| +++|.++||++|++..||+.|..
T Consensus 174 ~~~a~~~l~~~~r-----~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~ 248 (377)
T 2ahf_A 174 EAHALKSRRFLVR-----GDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKR 248 (377)
T ss_dssp HHHHHHHHHHTBB-----TTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHhCcC-----CCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 7777777665543 111 121000 10 0000000122355566 46788999999999999999886
Q ss_pred h
Q 043321 355 R 355 (617)
Q Consensus 355 ~ 355 (617)
.
T Consensus 249 l 249 (377)
T 2ahf_A 249 M 249 (377)
T ss_dssp H
T ss_pred H
Confidence 4
No 23
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=82.58 E-value=11 Score=39.35 Aligned_cols=80 Identities=16% Similarity=0.015 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHhcccC--CCChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCC-cccCCC----------
Q 043321 260 DLAGEIIAALSAASIVF--KDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEAR-DYYNST---------- 326 (617)
Q Consensus 260 dlaa~~AAALAaAS~vf--k~D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~-g~Y~ss---------- 326 (617)
...|.+..++|.|++++ ..++ ++++.|++..+|..+.-. .+ ..+ ++|.+.
T Consensus 56 ~~nar~l~~~a~a~~~~~~~~~~----~~l~~A~~~~~fl~~~~~--d~-----------~gg~g~~~s~d~dg~~~~~~ 118 (402)
T 1fp3_A 56 WLQGRQVWMYCRLYRKLERFHRP----ELLDAAKAGGEFLLRHAR--VA-----------PPEKKCAFVLTRDGRPVKVQ 118 (402)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCCH----HHHHHHHHHHHHHHHHTB--SS-----------TTSCCBCSEECTTSCEEECC
T ss_pred hhhHHHHHHHHHHHHHhcccCCH----HHHHHHHHHHHHHHHhcc--Cc-----------CCCCceEEEECCCCCccccc
Confidence 34778999999999998 3354 467888888888777300 00 011 222211
Q ss_pred -cccc--hhHHHHHHHHHHhCChhHHHHHHHhh
Q 043321 327 -SFID--ELVWGGTWLFFATGNNSYLAYATERF 356 (617)
Q Consensus 327 -~~~D--E~~WAAaeLy~ATGd~~Yl~~a~~~~ 356 (617)
...| -++||.++||++||+..|++.|.+..
T Consensus 119 ~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~ 151 (402)
T 1fp3_A 119 RSIFSECFYTMAMNELWRVTAEARYQSEAVDMM 151 (402)
T ss_dssp SSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 1112 35789999999999999999887654
No 24
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=81.58 E-value=18 Score=38.05 Aligned_cols=34 Identities=18% Similarity=0.082 Sum_probs=24.1
Q ss_pred cCCCcccchhHH---HHHHHHHHhCChhHHHHHHHhh
Q 043321 323 YNSTSFIDELVW---GGTWLFFATGNNSYLAYATERF 356 (617)
Q Consensus 323 Y~ss~~~DE~~W---AAaeLy~ATGd~~Yl~~a~~~~ 356 (617)
|...-|-|-++- --+|+++.|||++|++.|...+
T Consensus 163 ~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~ 199 (382)
T 3pmm_A 163 NHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQF 199 (382)
T ss_dssp CTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 333445565443 3478999999999999987654
No 25
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=81.21 E-value=14 Score=39.04 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=24.8
Q ss_pred cCCCcccchhHH-HHHHHHHHhCChhHHHHHHHhhh
Q 043321 323 YNSTSFIDELVW-GGTWLFFATGNNSYLAYATERFK 357 (617)
Q Consensus 323 Y~ss~~~DE~~W-AAaeLy~ATGd~~Yl~~a~~~~~ 357 (617)
+.+-+|..=++. +...+|+.|||++|++.++....
T Consensus 63 ~~~W~Wt~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~ 98 (382)
T 3pmm_A 63 WAGWEWTHGVGLYGIYQYYQQTGDIEMRDIIDRWFA 98 (382)
T ss_dssp TTSCSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred CcCccccHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 444444444444 66668999999999999998653
No 26
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=80.51 E-value=18 Score=39.12 Aligned_cols=82 Identities=13% Similarity=0.181 Sum_probs=43.6
Q ss_pred HHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHH---HHHH
Q 043321 263 GEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWG---GTWL 339 (617)
Q Consensus 263 a~~AAALAaAS~vfk~D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WA---AaeL 339 (617)
|-++.+|--++++=+ |+.|.+.+ +++.++.... .|.. . ++.-.-...|...-|-|-++-+ -+|+
T Consensus 148 g~~~~~Li~lY~~T~-d~~yl~~a----~~~ad~L~~~----~pRt-~---~Ggf~h~~~~~~q~WiD~lyM~~pfla~~ 214 (445)
T 3k11_A 148 GAVCTAMIKLRLKDE-SLPVDGLI----QNYFDFIINK----EYRL-A---DGTFARNRPQRNTLWLDDMFMGIPAVAQM 214 (445)
T ss_dssp HHHHHHHHHHHHHCT-TCCCHHHH----HHHHHHHHHT----SCBC-T---TCCBCBCSSSTTEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-CHHHHHHH----HHHHHHHHHc----CCCC-C---CCceeecCCCCCceEecchhhHHHHHHHH
Confidence 445555555555322 66555544 4455554442 2210 0 1111111234445567776444 4677
Q ss_pred HHHhCChh--HHHHHHHhhh
Q 043321 340 FFATGNNS--YLAYATERFK 357 (617)
Q Consensus 340 y~ATGd~~--Yl~~a~~~~~ 357 (617)
.+.||+.+ |++.|...+.
T Consensus 215 ~~~tgd~~~~y~d~A~~q~~ 234 (445)
T 3k11_A 215 SRYDKEAKNKYLAEAVKQFL 234 (445)
T ss_dssp HHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHCCcchHHHHHHHHHHH
Confidence 78899999 9999887553
No 27
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=78.77 E-value=5 Score=42.06 Aligned_cols=86 Identities=10% Similarity=-0.128 Sum_probs=50.0
Q ss_pred HHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHHH-hccCCCCC-CCcccc-cCCCCCCCCcccCCCc----ccchhHHH
Q 043321 263 GEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVT-SREDPGRK-QGIYTK-VDACGGEARDYYNSTS----FIDELVWG 335 (617)
Q Consensus 263 a~~AAALAaAS~vfk~D~~yA~klL~~A~~ay~fA-~~~~~~~~-p~~y~~-~~~~~~~~~g~Y~ss~----~~DE~~WA 335 (617)
.+.+-.|+.+++++. |+. +++.|+++++|+ .+..+... .+.+.. ..++.+ ..++.+.. ..-|.+.|
T Consensus 250 ie~~wlL~~a~~~~~-~~~----~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~--~~~l~d~~~~~W~qaea~~a 322 (402)
T 1fp3_A 250 LEAGWFLLRHSSRSG-DAK----LRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLC--PTQLEWAMKLWWPHSEAMIA 322 (402)
T ss_dssp HHHHHHHHHHHHHTT-CHH----HHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCC--CSSTTTTCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-ChH----HHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCc--cccCcCCCcCcHHHHHHHHH
Confidence 355667899999986 554 566677777777 44211101 232211 111111 11221110 11277999
Q ss_pred HHHHHHHhCChhHHHHHHHh
Q 043321 336 GTWLFFATGNNSYLAYATER 355 (617)
Q Consensus 336 AaeLy~ATGd~~Yl~~a~~~ 355 (617)
++.||.+||+..|++.+.+.
T Consensus 323 ~l~ly~~tgd~~yl~~a~~~ 342 (402)
T 1fp3_A 323 FLMGYSESGDPALLRLFYQV 342 (402)
T ss_dssp HHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999988764
No 28
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=71.32 E-value=8.9 Score=40.71 Aligned_cols=77 Identities=8% Similarity=-0.030 Sum_probs=52.3
Q ss_pred hhHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCC---------cc-
Q 043321 259 SDLAGEIIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNST---------SF- 328 (617)
Q Consensus 259 sdlaa~~AAALAaAS~vfk~D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss---------~~- 328 (617)
.-+.+.++.++|.|++ ++ ++. +++.|++..+|..+. .+. . ..+|+|-+. ..
T Consensus 50 ~~~nar~i~~~a~a~~-~g-~~~----~l~~A~~~~~fl~~~-------~~D----~--~~GG~~~s~d~dg~~~~~k~l 110 (421)
T 2zbl_A 50 LWITARMLHVYSVAAS-MG-RPG----AYDLVDHGIKAMNGA-------LRD----K--KYGGWYACVNDQGVVDASKQG 110 (421)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CTT----HHHHHHHHHHHHTTT-------TBC----T--TTSSBCSEEETTEEEECCEEH
T ss_pred HHHHHHHHHHHHHHHH-cC-Chh----HHHHHHHHHHHHHHh-------ccC----c--CCCeEEEEeCCCCCcCCchhH
Confidence 3457899999999997 65 443 677899999998772 121 0 112333221 11
Q ss_pred --cchhHHHHHHHHHHhCChhHHHHHHHh
Q 043321 329 --IDELVWGGTWLFFATGNNSYLAYATER 355 (617)
Q Consensus 329 --~DE~~WAAaeLy~ATGd~~Yl~~a~~~ 355 (617)
.-.+++|.++ |++||+..|++.+.+.
T Consensus 111 yd~Af~i~al~~-~~~tg~~~~l~~a~~~ 138 (421)
T 2zbl_A 111 YQHFFALLGAAS-AVTTGHPEARKLLDYT 138 (421)
T ss_dssp HHHHHHHHHHHH-HHTTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHhCCccHHHHHHHH
Confidence 1256789999 9999999999988754
No 29
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=64.47 E-value=43 Score=34.78 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHHHHHhhCCCCCCCc-cCcccCCcCCCCCCCCCcceEecCCCchhHHHHHHHHHHHhcc--------cC
Q 043321 206 LNHVKDIIKWGSDYLLKVGSTGNDTK-VSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASI--------VF 276 (617)
Q Consensus 206 ~pdiLdEikWglD~Llkmgd~~~g~~-~~~Dh~~W~~PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~--------vf 276 (617)
-+...+-|+=|++|||.||-++||=. .. |+...+...+-. +=|+++.+.-+|+.... +|
T Consensus 92 ~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFd--------pd~~~Yl~~IpF----nDDvtarvLelL~~~~~~~~~~~~~~~ 159 (332)
T 1gxm_A 92 NTKYRDAVRKAANFLVNSQYSTGALPQFY--------PLKGGYSDHATF----NDNGMAYALTVLDFAANKRAPFDTDVF 159 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHCCTTSCCBSEE--------SCCSGGGGSEEC----GGGHHHHHHHHHHHHHTTCTTSCSTTS
T ss_pred chHHHHHHHHHHHHHHhccCCCCCccccC--------CCcccccccCCc----chHHHHHHHHHHHHHHhccCCcccccc
Confidence 36788999999999999999866411 11 111111111212 22788888888888753 24
Q ss_pred CCChhHHHHHHHHHHHHHHHHhc
Q 043321 277 KDEIMYSGELIKAAGKLYEVTSR 299 (617)
Q Consensus 277 k~D~~yA~klL~~A~~ay~fA~~ 299 (617)
- |+.. .+...+.+++-+|..+
T Consensus 160 ~-~~~~-~~~~~av~Rgid~Llk 180 (332)
T 1gxm_A 160 S-DNDR-TRFKTAVTKGTDYILK 180 (332)
T ss_dssp C-HHHH-HHHHHHHHHHHHHHHH
T ss_pred c-cchh-hhhHHHHHHHHHHHHH
Confidence 3 4445 6777888888888777
No 30
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=63.64 E-value=8.9 Score=40.69 Aligned_cols=88 Identities=15% Similarity=0.025 Sum_probs=49.2
Q ss_pred HHHHHHHHHhcccCCC--ChhHHHHHHHHHHHHHHHHhccCCCCC--CCccc-ccCCCCCCCCcccCCCcc--cchhHHH
Q 043321 263 GEIIAALSAASIVFKD--EIMYSGELIKAAGKLYEVTSREDPGRK--QGIYT-KVDACGGEARDYYNSTSF--IDELVWG 335 (617)
Q Consensus 263 a~~AAALAaAS~vfk~--D~~yA~klL~~A~~ay~fA~~~~~~~~--p~~y~-~~~~~~~~~~g~Y~ss~~--~DE~~WA 335 (617)
.|.+=.|..++++..+ | +...++++.|+++++++.+.-+... .|.+. .++++.+.. ....+ +-|.+-|
T Consensus 250 iE~~wlLl~~~~~~~~~~~-~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~----~~k~~w~~aea~~a 324 (421)
T 2zbl_A 250 IEWGRLMLHLHAALEARFE-TPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIV----RERVRWPIVEAMGT 324 (421)
T ss_dssp HHHHHHHHHHHHHHHHTTC-CCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSC----CCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccc-cchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccC----CCcccHHHHHHHHH
Confidence 3555566667776531 2 0011578888888888765311111 23322 111110000 11112 2478889
Q ss_pred HHHHHHHhCChhHHHHHHHh
Q 043321 336 GTWLFFATGNNSYLAYATER 355 (617)
Q Consensus 336 AaeLy~ATGd~~Yl~~a~~~ 355 (617)
++.||+.||+..|++.+.+.
T Consensus 325 ll~l~~~tgd~~yl~~a~~~ 344 (421)
T 2zbl_A 325 AYALYTLTDDSQYEEWYQKW 344 (421)
T ss_dssp HHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999987764
No 31
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=48.45 E-value=59 Score=33.85 Aligned_cols=116 Identities=9% Similarity=-0.010 Sum_probs=69.2
Q ss_pred ChhHHHHHHHHHHHHHHhhCCCCCCCccCcccCCcCC------------CCCCCCCcceEecCCCchhHHHHHHHHHHHh
Q 043321 205 ELNHVKDIIKWGSDYLLKVGSTGNDTKVSNDINCWQR------------PEDMSYVRPVSVCDSTASDLAGEIIAALSAA 272 (617)
Q Consensus 205 ~~pdiLdEikWglD~Llkmgd~~~g~~~~~Dh~~W~~------------PEd~~~~R~v~~~s~~gsdlaa~~AAALAaA 272 (617)
..+..++.|+=.++|+++.... ..+...|-. ++. ..++.+..|. | +.-++-++..+
T Consensus 224 ~~~~~~~~~~~~~~~l~~~~~~------~~~g~~wp~g~~~~~~~~~~~~~~-~~~~~~~WCh--G---~~Gi~~~l~~~ 291 (409)
T 2g0d_A 224 SNEASLSALQKIIFIYEKFELE------RKKQFLWKDGLVADELKKEKVIRE-ASFIRDAWCY--G---GPGISLLYLYG 291 (409)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCC------GGGTTCCCSEECHHHHHHTSCCSC-CSCCCCCSSS--S---HHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHhc------CCCCCcCCCccccHhhhccccccc-CCCCCCcCCC--C---CHHHHHHHHHH
Confidence 4677888888899999884332 112223422 111 1122233444 4 44578888888
Q ss_pred cccCCCChhHHHHHHHHHHHHHHH-HhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhCChhHHHH
Q 043321 273 SIVFKDEIMYSGELIKAAGKLYEV-TSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATGNNSYLAY 351 (617)
Q Consensus 273 S~vfk~D~~yA~klL~~A~~ay~f-A~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATGd~~Yl~~ 351 (617)
.++++ |+.|.+.+.+.++.+++. .... .++.++ +.+ =.+.....||+.|++..|++.
T Consensus 292 ~~~~~-d~~~~~~a~~~~~~~~~~~~~~~----~~~LCH------G~a-----------G~~~~l~~l~~~~~~~~~~~~ 349 (409)
T 2g0d_A 292 GLALD-NDYFVDKAEKILESAMQRKLGID----SYMICH------GYS-----------GLIEICSLFKRLLNTKKFDSY 349 (409)
T ss_dssp HHHTT-CHHHHHHHHHHHHHHHHHCTTCC----SCCTTT------SHH-----------HHHHHHHHHHHHHCCCTTHHH
T ss_pred HHHcC-CHHHHHHHHHHHHHHHHhccCCC----CCCCCC------hHH-----------HHHHHHHHHHHHhCCHHHHHH
Confidence 88887 677776666666666654 1110 333332 111 136677889999999999988
Q ss_pred HHH
Q 043321 352 ATE 354 (617)
Q Consensus 352 a~~ 354 (617)
+..
T Consensus 350 a~~ 352 (409)
T 2g0d_A 350 MEE 352 (409)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 32
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=43.10 E-value=94 Score=33.20 Aligned_cols=82 Identities=16% Similarity=0.113 Sum_probs=55.7
Q ss_pred hhHHHHHHHHHHHHHHhhCCCCCCCc-cCcccCCcCCCCCCCCCcceEecCCCchhHHHHHHHHHHHhccc---CCC-Ch
Q 043321 206 LNHVKDIIKWGSDYLLKVGSTGNDTK-VSNDINCWQRPEDMSYVRPVSVCDSTASDLAGEIIAALSAASIV---FKD-EI 280 (617)
Q Consensus 206 ~pdiLdEikWglD~Llkmgd~~~g~~-~~~Dh~~W~~PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~v---fk~-D~ 280 (617)
-+...+-++=|++|||.||.++||=. +. |+...+...+-. +=|+++.+.-.|+....- |.- ++
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFd--------pdn~~y~~~IpF----nDDvt~rvle~L~~~~~~~~~~~~~~~ 237 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQFPNGGWPQVW--------PLEGGYHDAITY----NDDALVHVAELLSDIAAGRDGFGFVPP 237 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSCTTSCCBSBS--------SCCCGGGGSEEC----GGGHHHHHHHHHHHHHHTCTTCTTSCH
T ss_pred cHHHHHHHHHHHHHHHHccCCCCCCcCcC--------ccccccccCCCc----CcHHHHHHHHHHHHHHhccCcccccch
Confidence 46789999999999999999866411 11 222122222211 226788888877776652 322 78
Q ss_pred hHHHHHHHHHHHHHHHHhc
Q 043321 281 MYSGELIKAAGKLYEVTSR 299 (617)
Q Consensus 281 ~yA~klL~~A~~ay~fA~~ 299 (617)
++..+...+.+++-+|..+
T Consensus 238 ~~~~~~~~av~Rgi~~Ll~ 256 (408)
T 1r76_A 238 AIRTRALEATNAAIHCIVE 256 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHH
Confidence 8888999999999999877
No 33
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=39.65 E-value=1.4e+02 Score=31.44 Aligned_cols=65 Identities=8% Similarity=-0.029 Sum_probs=38.4
Q ss_pred HHHHHHHhcccCCCChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCCCcccchhHHHHHHHHHHhC
Q 043321 265 IIAALSAASIVFKDEIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNSTSFIDELVWGGTWLFFATG 344 (617)
Q Consensus 265 ~AAALAaAS~vfk~D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~ss~~~DE~~WAAaeLy~ATG 344 (617)
++++++..+...+ |++.+++|++...++- .. ... .. ..-.|+..+ .+||...|++.|+
T Consensus 125 ~l~~l~~ly~~~g-~~~~a~~~~~~l~~~~---~~-----~~~-~~--------~dll~G~AG----~l~aLl~L~~~~~ 182 (411)
T 3e6u_A 125 PLAVAAVLYHKMN-NEKQAEDCITRLIHLN---KI-----DPH-AP--------NEMLYGRIG----YIYALLFVNKNFG 182 (411)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHGGG---GG-----CTT-CC--------SSTTTSHHH----HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhC-CHHHHHHHHHHHHHHh---cc-----ccc-CC--------hhhhcCcHH----HHHHHHHHHHHcC
Confidence 5555665555555 5557788877665432 22 110 00 011333443 3899999999999
Q ss_pred ChhHHHH
Q 043321 345 NNSYLAY 351 (617)
Q Consensus 345 d~~Yl~~ 351 (617)
+.++++.
T Consensus 183 ~~~~~~~ 189 (411)
T 3e6u_A 183 VEKIPQS 189 (411)
T ss_dssp SCCSCHH
T ss_pred CccchHH
Confidence 9887765
No 34
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=35.99 E-value=39 Score=36.76 Aligned_cols=25 Identities=16% Similarity=0.066 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHhCChhHHHHHHHhh
Q 043321 332 LVWGGTWLFFATGNNSYLAYATERF 356 (617)
Q Consensus 332 ~~WAAaeLy~ATGd~~Yl~~a~~~~ 356 (617)
++.|.+|||++|++..|++.|..-.
T Consensus 431 lL~allEL~~atq~~~~l~lA~~~g 455 (543)
T 2v8i_A 431 ALFALLDLYHASQVADYRKLAEKIG 455 (543)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5689999999999999999988643
No 35
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=24.52 E-value=3e+02 Score=30.05 Aligned_cols=103 Identities=10% Similarity=-0.013 Sum_probs=57.7
Q ss_pred HHHHHHHHhHHHHhhcCCh-hHHHHHHHHHHHHHHhhCCCCC--CCcc-------------------C--cccCCcC--C
Q 043321 188 ILSWSVIEYQEKYAEIGEL-NHVKDIIKWGSDYLLKVGSTGN--DTKV-------------------S--NDINCWQ--R 241 (617)
Q Consensus 188 ~L~wa~~e~~~~~~~~~~~-pdiLdEikWglD~Llkmgd~~~--g~~~-------------------~--~Dh~~W~--~ 241 (617)
.|+|.|. ....+..-+ +..++-++--+++|...|+.++ +-.. + .-...|. |
T Consensus 187 ~la~~Yy---~~TgD~~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fR 263 (489)
T 2p0v_A 187 RLAYHYW---KTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFR 263 (489)
T ss_dssp HHHHHHH---HHHCCCTTSSHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBC
T ss_pred HHHHHHH---HHhCCchhhHHHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCC
Confidence 3555443 333333333 3566788889999998776542 1000 0 0011231 4
Q ss_pred CCCCCCCcceEecCCCchhHHHHHHHHHHHhcccCCC---ChhHHHHHHHHHHHHHHHHhc
Q 043321 242 PEDMSYVRPVSVCDSTASDLAGEIIAALSAASIVFKD---EIMYSGELIKAAGKLYEVTSR 299 (617)
Q Consensus 242 PEd~~~~R~v~~~s~~gsdlaa~~AAALAaAS~vfk~---D~~yA~klL~~A~~ay~fA~~ 299 (617)
|.|+.. |.-|-+. | .+.++++|-.++.+.+. |.+.|++|.+.|+++-+--++
T Consensus 264 PSDDa~-~yg~~ip---S--N~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~ 318 (489)
T 2p0v_A 264 PSDDAT-TFQFLVP---S--NFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKK 318 (489)
T ss_dssp TTSCBC-SSSEEHH---H--HHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcch-hcCcchH---H--HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 555442 2223322 1 34577777777766654 778999999999997765444
No 36
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=21.89 E-value=1.9e+02 Score=31.96 Aligned_cols=93 Identities=16% Similarity=0.066 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHhcccCCC--ChhHHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCCCcccCC---C--cccchhH
Q 043321 261 LAGEIIAALSAASIVFKD--EIMYSGELIKAAGKLYEVTSREDPGRKQGIYTKVDACGGEARDYYNS---T--SFIDELV 333 (617)
Q Consensus 261 laa~~AAALAaAS~vfk~--D~~yA~klL~~A~~ay~fA~~~~~~~~p~~y~~~~~~~~~~~g~Y~s---s--~~~DE~~ 333 (617)
++.=+...+|+++.++.. +-++|+++.+.--.+|..-. .|--|+.|.-++........++-. . -..-|.+
T Consensus 364 L~cF~gG~~aLgg~~~~~~~~l~~a~~L~~tC~~~Y~~~~---tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~I 440 (538)
T 1x9d_A 364 LVCFLPGTLALGVYHGLPASHMELAQELMETCYQMNRQME---TGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETV 440 (538)
T ss_dssp GGGHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTST---TSCCCSEEECCSSCCTTCCSCBCCGGGCCBCCCCHHH
T ss_pred HhhhhhhHHHhcCcccCcHHHHHHHHHHHHHHHHHHHhcc---cCCCceEEEeccCCCccccceeeeccCcccCCChHHH
Confidence 344567788999998876 44567777777666665422 233576543111000001111111 1 1234777
Q ss_pred HHHHHHHHHhCChhHHHHHHHhh
Q 043321 334 WGGTWLFFATGNNSYLAYATERF 356 (617)
Q Consensus 334 WAAaeLy~ATGd~~Yl~~a~~~~ 356 (617)
=.--.|||+|||..|++.+-+-+
T Consensus 441 ES~fylyR~TgD~~yre~gw~~f 463 (538)
T 1x9d_A 441 ESLFYLYRVTGDRKYQDWGWEIL 463 (538)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHH
Confidence 77788999999999999877644
Done!