Citrus Sinensis ID: 043322

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
Protein Sequence
MIIQKDEATNEKLGDITIGDNNNEEIGDDNPGEWLNLKLGGNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPPPEPLKLDLNLRL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHcccccccccccccccccccEEEccccccccccccccccccccccEEEEccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccc
Coil and Loop (DISEMBL)
miiqkdeatneklgditigdnnneeigddnpgewlnlklggnslstsrdpdsparpttakvfscnfcmrkffssqalgghqnahkRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVrahslvhkpsrdgagvgarfndadtgfgmawtpyvleeatdvmwpgsfrvnlqlpepppeplkldlnlrl
Flexible Loop (DISEMBL)
miiqkdeatneklgditigdnnneeigddNPGEWLNLKLGGNSlstsrdpdsparPTTAKVFSCNFCMRKFFSsqalgghqnahkrerGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLvhkpsrdgagvgARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNlqlpepppeplkldlnlrl
Low Complexity Region (SEG)
MIIQKDEATNEKLGDITigdnnneeigddnpgeWLNLKLGGNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVnlqlpepppeplkldlnlRL
Disordered region (IsUnstruct)
**********************************************************AKVFSCNFCMRKFFSS*****************************GLPVHTNMVRSLGVRAHSLVH*****GAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNL******************
Disordered Region (DISOPRED)
*************************************************************FSCNFCMRKFFSSQALGG**************************PVHTNMV********************************************************************LDLNLRL
Disordered Region (DISEMBL)
MIIQKDEATNEKLGDITIGDNNNEEIGDDNPGEWLNLKLGGNS**************TAKVFSCNFCMRKFFSSQ*******************QSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPPPEPLKLDLNLRL
Disordered Region (DISPRO)
**********************************************************AKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSF****************D*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIIQKDEATNEKLGDITIGDNNNEEIGDDNPGEWLNLKLGGNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPPPEPLKLDLNLRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	187	2.2.26 [Sep-21-2011]
Q39266	209	Zinc finger protein 7 OS=	yes	no	0.721	0.645	0.404	7e-17
Q39263	260	Zinc finger protein 4 OS=	no	no	0.566	0.407	0.405	8e-17
Q42485	228	Zinc finger protein 1 OS=	no	no	0.363	0.298	0.488	3e-16
Q39262	235	Zinc finger protein 3 OS=	no	no	0.368	0.293	0.542	4e-15
Q9FFX4	161	Zinc finger protein KNUCK	no	no	0.213	0.248	0.65	9e-11
Q39261	150	Zinc finger protein 2 OS=	no	no	0.181	0.226	0.764	1e-09
Q39265	197	Zinc finger protein 6 OS=	no	no	0.406	0.385	0.413	8e-09
Q9LHS9	226	Probable transcriptional	no	no	0.433	0.358	0.329	3e-05
Q6S591	253	Zinc finger protein JAGGE	no	no	0.229	0.169	0.441	8e-05
Q38895	204	Transcriptional regulator	no	no	0.192	0.176	0.472	0.0002

>sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 77/146 (52%), Gaps = 11/146 (7%)

Query: 35  LNLKLGGNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRY 94
           L+LKL       ++     A P   +VFSCN+C RKF+SSQALGGHQNAHKRER  AKR 
Sbjct: 35  LDLKLNDTFNDDTKSTKCEANP---RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA 91

Query: 95  QSQ-RMMTMMGLPVHTNMVRSLGVRAHS-LVHKPSRDGAGVGARFNDADTGFGMAWTPYV 152
               RM      P +T    SLG++AHS L+H        + +RF+    G+     P  
Sbjct: 92  MHMGRMFGHHHRP-YTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFH--HQGYFGNTVPLF 148

Query: 153 LEE---ATDVMWPGSFRVNLQLPEPP 175
            +     +D  WPGSFR  ++  E P
Sbjct: 149 FDYDDGGSDFFWPGSFRQVVEEAEAP 174

Arabidopsis thaliana (taxid: 3702)

>sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2

 Score = 86.7 bits (213), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 72/143 (50%), Gaps = 37/143 (25%)

Query: 57  TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRM----------------- 99
            + +VFSCN+C RKF+SSQALGGHQNAHKRER  AKR  + RM                 
Sbjct: 80  VSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR--AMRMGLAGVFPGRGSSSNYAA 137

Query: 100 ----MTMMGLPVH----TNMV--RSLGVRAHSLVHKPSRDGAGVG------ARFNDADTG 143
                 +  LP+H     NM   R+LG+RAHS  H  S             ARFN     
Sbjct: 138 AATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQG--Y 195

Query: 144 FGMAWTPYVLEEATDVMWPGSFR 166
           FG     YV ++  +++WPGSFR
Sbjct: 196 FGNCIPFYVEDDEAEMLWPGSFR 218

Arabidopsis thaliana (taxid: 3702)

>sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 22/90 (24%)

Query: 60  KVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMM------------------- 100
           +VFSCN+C RKF+SSQALGGHQNAHKRER  AKR Q  +M                    
Sbjct: 66  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRF 125

Query: 101 -TMMGLPVH--TNMVRSLGVRAHSLVHKPS 127
            +M  LP+H   N   +LG++AHS +HKPS
Sbjct: 126 ASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

Arabidopsis thaliana (taxid: 3702)

>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1

 Score = 81.3 bits (199), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 51/83 (61%), Gaps = 14/83 (16%)

Query: 57  TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMG----------LP 106
           T  K+FSCN+C R F+SSQALGGHQNAHKRER  AKR   QRM               LP
Sbjct: 56  TEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR--GQRMAASASAFGHPYGFSPLP 113

Query: 107 VH--TNMVRSLGVRAHSLVHKPS 127
            H   N  RSLG++AHS+ HK S
Sbjct: 114 FHGQYNNHRSLGIQAHSISHKLS 136

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1

 Score = 66.6 bits (161), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 33/40 (82%)

Query: 54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKR 93
          A P + ++F C +C RKF++SQALGGHQNAHKRER AA+R
Sbjct: 30 AHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69

May function as a transcriptional repressor of cellular proliferation that regulates floral determinacy and relative size of basal pattern elements along the proximo-distal axis of the developing gynoecium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39261|ZFP2_ARATH Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/34 (76%), Positives = 30/34 (88%)

Query: 60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKR 93
          +VFSCN+C RKF+SSQALGGHQNAHK ER  AK+
Sbjct: 50 RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83

Arabidopsis thaliana (taxid: 3702)

>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 11/87 (12%)

Query: 33  EWLNLKLGGNSL---STSRDPDSPARP-----TTAKVFSCNFCMRKFFSSQALGGHQNAH 84
           E  +LKL G +L   ++ ++  S  RP     + ++ + C +C R+F +SQALGGHQNAH
Sbjct: 4   ETSSLKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAH 63

Query: 85  KRERGAAKRYQSQRMMTMMGLPVHTNM 111
           K+ER   KR Q   M+   GLP H N 
Sbjct: 64  KKERQLLKRAQ---MLATRGLPRHHNF 87

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2

 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 60  KVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRS-LGVR 118
           + +SC+FC R+F S+QALGGH N H+R+R   K+       T    P   +  +  L V 
Sbjct: 53  RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATPPECDRQQQVLDVG 112

Query: 119 AHSLVHKPSRDGAGVGARFNDA 140
           +  LV + +R   G     +D 
Sbjct: 113 SKVLVQEETRKPNGTKREISDV 134

Probable transcriptional regulator essential for petal development. Required for the early development of the organ primordia of the second whorl. Acts downstream of AP1 and PTL.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6S591|JAG_ARATH Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1

 Score = 47.0 bits (110), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 58  TAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMM 100
           + KV+ C FC  KF  SQALGGH N H++ER      Q+++++
Sbjct: 47  SGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLV 89

Controls the morphogenesis of lateral organs. Functions in lateral organ shape and is sufficient to induce proliferation and growth of lateral organ tissue. Is necessary and sufficient for bract formation, but its expression is excluded from the cryptic bract, which could be a cause of bractless flowers in Arabidopsis. Participates with FIL and YAB3 in regulating valve margin development. Functions with JGL to define stamen and carpel shape. Functions with AS1 and AS2 in the sepal and petal primordia to repress boundary-specifying genes for normal development of the organs.

Arabidopsis thaliana (taxid: 3702)

>sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1

 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 26/36 (72%)

Query: 60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQ 95
          + ++C+FC R+F S+QALGGH N H+R+R   +  Q
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQ 80

Probable transcriptional regulator considered as cadastral protein that acts indirectly to prevent the B class homeotic proteins APETALA3 and perhaps PISTILLATA from acting in the gynoecial whorl. Principal function is to balance cell proliferation in the third and fourth whorls of developing flowers thereby maintaining the boundary between stamens and carpels. May fulfill this role by repressing genes implicated in cell division. Plays equally a role in the determinacy of the floral meristem. Is also required for normal ovule development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
224103697	190	predicted protein [Populus trichocarpa]	1.0	0.984	0.642	1e-66
224056210	246	predicted protein [Populus trichocarpa]	1.0	0.760	0.631	4e-65
225429309	189	PREDICTED: zinc finger protein 7-like [V	0.967	0.957	0.653	1e-64
302398659	187	C2H2L domain class transcription factor	0.930	0.930	0.612	1e-55
255573085	204	zinc finger protein, putative [Ricinus c	1.0	0.916	0.602	4e-55
351726684	188	uncharacterized protein LOC100306296 [Gl	0.978	0.973	0.578	6e-55
147790933	248	hypothetical protein VITISV_001090 [Viti	0.989	0.745	0.562	7e-54
225438896	193	PREDICTED: zinc finger protein 7-like [V	0.989	0.958	0.562	1e-53
356575696	191	PREDICTED: zinc finger protein 4-like [G	0.967	0.947	0.598	1e-52
388519679	197	unknown [Lotus japonicus]	0.978	0.928	0.567	1e-51

>gi|224103697|ref|XP_002313159.1| predicted protein [Populus trichocarpa] gi|222849567|gb|EEE87114.1| predicted protein [Populus trichocarpa]

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 122/190 (64%), Positives = 150/190 (78%), Gaps = 3/190 (1%)

Query: 1   MIIQKDE---ATNEKLGDITIGDNNNEEIGDDNPGEWLNLKLGGNSLSTSRDPDSPARPT 57
           MI Q++     T++   +I    N+NE   D+NPGEWLNL+LGGNS ST+ D DS +RPT
Sbjct: 1   MIFQEEAIEIKTSKHQNEIVGNHNSNEGYNDNNPGEWLNLRLGGNSPSTAGDYDSQSRPT 60

Query: 58  TAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGV 117
           ++KVFSCNFC RKFFSSQALGGHQNAHKRERGAA+RY SQRMMTMMGLP+++ M RSLGV
Sbjct: 61  SSKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYHSQRMMTMMGLPINSPMARSLGV 120

Query: 118 RAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPPPE 177
           R H+LVHKP+RDG  +G RFN+A+ GF M+W P+ L++  D+ WPGSFR++ QLPE   E
Sbjct: 121 RPHALVHKPTRDGTPIGGRFNEANPGFVMSWMPFALDDTADLTWPGSFRLDSQLPETSSE 180

Query: 178 PLKLDLNLRL 187
            LKLDLNLRL
Sbjct: 181 SLKLDLNLRL 190

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056210|ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|222846015|gb|EEE83562.1| predicted protein [Populus trichocarpa]

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 120/190 (63%), Positives = 148/190 (77%), Gaps = 3/190 (1%)

Query: 1   MIIQKDEATNEKL---GDITIGDNNNEEIGDDNPGEWLNLKLGGNSLSTSRDPDSPARPT 57
           MI Q++    + L    ++   +N+NE   D+NPGEWLNL LGGNS ST+ D DS +RPT
Sbjct: 57  MIFQEEAIEIKTLKHQNEMLNSNNSNEGYDDNNPGEWLNLSLGGNSPSTAGDYDSQSRPT 116

Query: 58  TAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGV 117
           ++KVFSCNFC RKFFSSQALGGHQNAHKRERGAA+RY SQRMMT+MGLPV++ M RSLGV
Sbjct: 117 SSKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYHSQRMMTIMGLPVNSPMARSLGV 176

Query: 118 RAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPPPE 177
           R H+LVHKP+RDG  +  RFN+A  GF M+W P+ +++ TD+ WPGSFR++ Q PE   E
Sbjct: 177 RPHTLVHKPNRDGTAIAGRFNEASPGFDMSWMPFTVDDTTDLTWPGSFRLDPQPPETSSE 236

Query: 178 PLKLDLNLRL 187
           PLKLDLNLRL
Sbjct: 237 PLKLDLNLRL 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429309|ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 119/182 (65%), Positives = 144/182 (79%), Gaps = 1/182 (0%)

Query: 6   DEATNEKLGDITIGDNNNEEIGDDNPGEWLNLKLGGNSLSTSRDPDSPARPTTAKVFSCN 65
           + + N++ G + I +N +E   +DNPGEWLNL LG N  ST+ D D  +RPT++KVFSCN
Sbjct: 9   ETSVNKQQGGLRISENGDEGAEEDNPGEWLNLSLGRNLPSTALDSDPQSRPTSSKVFSCN 68

Query: 66  FCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHK 125
           FCMRKF+SSQALGGHQNAHKRERGAA+RYQS RMM MMGLP++T  +RSLGVR HSLV K
Sbjct: 69  FCMRKFYSSQALGGHQNAHKRERGAARRYQSHRMMAMMGLPMNTP-IRSLGVRPHSLVQK 127

Query: 126 PSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPPPEPLKLDLNL 185
           P+RDG  + ARF+D++TGFGM WTP+ LEE  DVMWPGS+R+  Q  E   EPLKLDLNL
Sbjct: 128 PNRDGTAIVARFDDSNTGFGMTWTPFTLEETMDVMWPGSYRLEQQPSEQTSEPLKLDLNL 187

Query: 186 RL 187
           RL
Sbjct: 188 RL 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398659|gb|ADL36624.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 109/178 (61%), Positives = 131/178 (73%), Gaps = 4/178 (2%)

Query: 10  NEKLGDITIGDNNNEEIGDDNPGEWLNLKLGGNSLSTSRDPDSPARPTTAKVFSCNFCMR 69
           N++     I +++ EE  D N GEWLNL LG  S+S     DS ARP + KVFSCNFCMR
Sbjct: 14  NKEQNRFLISNDDKEETEDLNRGEWLNLSLG--SISAQGQIDSQARPASGKVFSCNFCMR 71

Query: 70  KFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRD 129
           KFFSSQALGGHQNAHKRERGAA+RYQSQR+M+MMG P  T+ VRSL V+ HSLVHKPSR+
Sbjct: 72  KFFSSQALGGHQNAHKRERGAARRYQSQRLMSMMGFPFTTSTVRSLSVQPHSLVHKPSRE 131

Query: 130 GAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPPPEPLKLDLNLRL 187
              + ARF+DA+  FG    P+ L++  D MWPGSFR++ Q+ EP  EP KLDLNLRL
Sbjct: 132 ETSLVARFSDANARFGT--MPFTLDDVMDSMWPGSFRLDPQVLEPQSEPSKLDLNLRL 187

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573085|ref|XP_002527472.1| zinc finger protein, putative [Ricinus communis] gi|223533112|gb|EEF34870.1| zinc finger protein, putative [Ricinus communis]

 Score =  219 bits (558), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/204 (60%), Positives = 148/204 (72%), Gaps = 17/204 (8%)

Query: 1   MIIQKDE------ATN-EKLGDITIGDNNNEEIGDDNPGEWLNLKLGGNS--------LS 45
           MI ++DE      ATN  ++       ++N E  + NPGEWLNL LGGNS        LS
Sbjct: 1   MIFKEDETEAIEIATNMHQVESRIYSSSSNRETEESNPGEWLNLSLGGNSMSAAGDSSLS 60

Query: 46  TSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGL 105
           T+ D D  +RPT++KVFSCNFC RKF+SSQALGGHQNAHKRERGAA+RY SQRMMT+MG 
Sbjct: 61  TAGDYDLQSRPTSSKVFSCNFCRRKFYSSQALGGHQNAHKRERGAARRYHSQRMMTIMGF 120

Query: 106 PVHTNMVRSLGVRAHSLVHKPSRDGAG--VGARFNDADTGFGMAWTPYVLEEATDVMWPG 163
           P+ T + RSLGVR H+LVHK SR+G G  V  RFN+ + GFGMA  P+ LE+A D+MWPG
Sbjct: 121 PMSTPVGRSLGVRPHALVHKTSREGTGTTVAPRFNEVNGGFGMACLPFTLEDAMDLMWPG 180

Query: 164 SFRVNLQLPEPPPEPLKLDLNLRL 187
           SFR + Q PEPP EPL+LDLNLRL
Sbjct: 181 SFRFDAQPPEPPSEPLELDLNLRL 204

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726684|ref|NP_001236623.1| uncharacterized protein LOC100306296 [Glycine max] gi|255628135|gb|ACU14412.1| unknown [Glycine max]

 Score =  218 bits (556), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 111/192 (57%), Positives = 135/192 (70%), Gaps = 9/192 (4%)

Query: 1   MIIQKDE----ATNEKLGDITIGDNNNEEIGDDNPGEWLNLKLGGNSLSTSRDPDSPARP 56
           M+I +DE    A+ E+  ++  GD +N    DDN  EWLNL +GG +   S    +   P
Sbjct: 1   MMITEDETTLTASKEQQSEMMNGDKDNHGSEDDNSKEWLNLSIGGTTTLLS----TAVPP 56

Query: 57  TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHT-NMVRSL 115
            TAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA+RYQSQR M +MG  ++T  M RSL
Sbjct: 57  ATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSMNTLTMCRSL 116

Query: 116 GVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPP 175
           GV+ HSLVHKP RDG  V   F+DA    GMAWTP+  E+  D++WPGSFR+  + P+ P
Sbjct: 117 GVQPHSLVHKPCRDGIMVAPSFHDAYARIGMAWTPFWTEDQADMVWPGSFRLVPKQPQSP 176

Query: 176 PEPLKLDLNLRL 187
            EPLKLDL+LRL
Sbjct: 177 QEPLKLDLDLRL 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790933|emb|CAN77233.1| hypothetical protein VITISV_001090 [Vitis vinifera]

 Score =  215 bits (547), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 108/192 (56%), Positives = 133/192 (69%), Gaps = 7/192 (3%)

Query: 2   IIQKDEATNE-----KLGDITIGDNNNEEIGDDNPGEWLNLKLGGNSLSTSRDPDSPARP 56
           I Q++E  NE     +  +     ++ +  GDDN GEWL+L L  N   T+ D D  ++P
Sbjct: 3   ISQREEEANEVSSNNQDAESKTRSDDEKTSGDDNLGEWLSLSLSRNEAFTTGDGDPQSKP 62

Query: 57  TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQR-MMTMMGLPVHTNMVRSL 115
              K+FSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQS R MM  MG P+++  +RSL
Sbjct: 63  AGNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSHRMMMATMGFPLNSLTIRSL 122

Query: 116 GVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPP 175
           G + HSL HKP R+G  V ARFND +TGF MAWTP+V+EEA D +WPGSF V+ +LP   
Sbjct: 123 GAQPHSLAHKPGREGTEVAARFNDPNTGFRMAWTPFVMEEAMDSIWPGSFHVD-KLPSQA 181

Query: 176 PEPLKLDLNLRL 187
            +  KLDLNL L
Sbjct: 182 SDQHKLDLNLSL 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438896|ref|XP_002279158.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/192 (56%), Positives = 133/192 (69%), Gaps = 7/192 (3%)

Query: 2   IIQKDEATNE-----KLGDITIGDNNNEEIGDDNPGEWLNLKLGGNSLSTSRDPDSPARP 56
           I Q++E  NE     +  +     ++ +  GDDN GEWL+L L  N   T+ D D  ++P
Sbjct: 3   ISQREEEANEVSSNNQDAESKTRSDDEKTSGDDNLGEWLSLSLSRNEAFTTGDGDPQSKP 62

Query: 57  TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQR-MMTMMGLPVHTNMVRSL 115
              K+FSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQS R MM  MG P+++  +RSL
Sbjct: 63  AGNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSHRMMMATMGFPLNSLTIRSL 122

Query: 116 GVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEATDVMWPGSFRVNLQLPEPP 175
           G + HSL HKP R+G  V ARFND +TGF MAWTP+V+EEA D +WPGSF V+ +LP   
Sbjct: 123 GAQPHSLAHKPGREGTEVAARFNDPNTGFRMAWTPFVMEEAMDSIWPGSFHVD-KLPSQA 181

Query: 176 PEPLKLDLNLRL 187
            +  KLDLNL L
Sbjct: 182 SDQHKLDLNLSL 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575696|ref|XP_003555974.1| PREDICTED: zinc finger protein 4-like [Glycine max]

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/197 (59%), Positives = 138/197 (70%), Gaps = 16/197 (8%)

Query: 1   MIIQKDEAT----NEKLGDITIGDNNNEEIGDDNPGEWLNLKLGG-NSLSTSRDPDSPAR 55
           M+I +DE T     E+  ++  GD +N    D NP EWLNL +GG +SLSTS D DS AR
Sbjct: 1   MMITEDETTLTTGKEQQSEVMNGDKDNHGSEDGNPKEWLNLSIGGTSSLSTSGDTDSQAR 60

Query: 56  P-TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHT-NMVR 113
           P  TAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA+RYQSQR M +MG  ++T  M R
Sbjct: 61  PPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSMNTPTMFR 120

Query: 114 SLGVRAHSLVHKPSRDGAG-VGARFNDADTG--FGMAWTPYVLEEATDVMWPGSFRVNLQ 170
           SLGV+ HSLVHKP R G   V   F+DA+     GMAWTP+  E+  D++WPGSFR+   
Sbjct: 121 SLGVQPHSLVHKPRRGGGTMVTPGFHDANAHARLGMAWTPFSTEDQADMVWPGSFRL--- 177

Query: 171 LPEPPPEPLKLDLNLRL 187
               P EPLKLDL LRL
Sbjct: 178 ---VPREPLKLDLGLRL 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519679|gb|AFK47901.1| unknown [Lotus japonicus]

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/201 (56%), Positives = 139/201 (69%), Gaps = 18/201 (8%)

Query: 1   MIIQKDEAT----NEKLGDITIGDNNNEEIGDDNPGEWLNLKLG--------GNSLSTSR 48
           M+I+++E       E+  +    D+NN+   DDNP EWLNL LG        G++ S SR
Sbjct: 1   MMIKENETIVTTNKEQASEGMSTDSNNDGREDDNPEEWLNLSLGGGSSLSTEGDAESQSR 60

Query: 49  DPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVH 108
            P  P    TAKVFSCNFC RKFFSSQALGGHQNAHKRERGAA+RYQSQR M +MGLP++
Sbjct: 61  PPPPP----TAKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQRTMALMGLPMN 116

Query: 109 TNMVRSLGVRAHSLVHKPSRDGAGVGARFND--ADTGFGMAWTPYVLEEATDVMWPGSFR 166
           T M+R+LGV+ HSLVHKP   G  V   F++  A  G GM  TP+  E+ TD++WPG FR
Sbjct: 117 TPMLRTLGVQPHSLVHKPCGGGTVVAPSFHEAYAAAGIGMPCTPFAAEDQTDLVWPGGFR 176

Query: 167 VNLQLPEPPPEPLKLDLNLRL 187
           + LQ PEPP EPLKLDL+LRL
Sbjct: 177 MVLQQPEPPQEPLKLDLDLRL 197

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
TAIR|locus:2013820	260	ZFP4 "AT1G66140" [Arabidopsis	0.315	0.226	0.583	9.7e-22
TAIR|locus:2825107	209	ZFP7 "AT1G24625" [Arabidopsis	0.673	0.602	0.423	2.5e-17
TAIR|locus:2183780	272	AT5G10970 "AT5G10970" [Arabido	0.379	0.261	0.531	9.8e-16
TAIR|locus:2146960	235	ZFP3 "AT5G25160" [Arabidopsis	0.395	0.314	0.539	5.4e-15
TAIR|locus:2025777	228	ZFP1 "AT1G80730" [Arabidopsis	0.342	0.280	0.569	1e-13
TAIR|locus:2159088	161	KNU "AT5G14010" [Arabidopsis t	0.224	0.260	0.642	2.8e-11
TAIR|locus:2174547	150	ZFP2 "AT5G57520" [Arabidopsis	0.315	0.393	0.539	3.5e-11
TAIR|locus:2019723	197	ZFP6 "AT1G67030" [Arabidopsis	0.385	0.365	0.445	1.5e-10
TAIR|locus:2156529	173	LATE "LATE FLOWERING" [Arabido	0.288	0.312	0.509	3.2e-10
TAIR|locus:2181007	215	AT5G01860 "AT5G01860" [Arabido	0.187	0.162	0.685	2.2e-09

TAIR|locus:2013820 ZFP4 "AT1G66140" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
 Identities = 35/60 (58%), Positives = 43/60 (71%)

Query:    35 LNLKLGGNSLSTSRDPDSPARPTTAK-VFSCNFCMRKFFSSQALGGHQNAHKRERGAAKR 93
             L L L   S S++ +     +P+ +K VFSCN+C RKF+SSQALGGHQNAHKRER  AKR
Sbjct:    57 LTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 116

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2825107 ZFP7 "AT1G24625" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 58/137 (42%), Positives = 73/137 (53%)

Query:    35 LNLKLGGNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRY 94
             L+LKL       ++     A P   +VFSCN+C RKF+SSQALGGHQNAHKRER  AKR 
Sbjct:    35 LDLKLNDTFNDDTKSTKCEANP---RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA 91

Query:    95 QSQ-RMMTMMGLPVHTNMVRSLGVRAHS-LVHKPSRDGAGVGARFNDADTGFGMAWTPYV 152
                 RM      P +T    SLG++AHS L+H        + +RF+     FG    P  
Sbjct:    92 MHMGRMFGHHHRP-YTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGY-FGNT-VPLF 148

Query:   153 LEE---ATDVMWPGSFR 166
              +     +D  WPGSFR
Sbjct:   149 FDYDDGGSDFFWPGSFR 165

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0046982 "protein heterodimerization activity" evidence=IPI

TAIR|locus:2183780 AT5G10970 "AT5G10970" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 42/79 (53%), Positives = 50/79 (63%)

Query:    57 TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMG-------LPVHT 109
             T  K+FSCN+C R F+SSQALGGHQNAHKRER  AKR Q        G       +P H 
Sbjct:    99 TEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFHG 158

Query:   110 NMV-RSLGVRAHSLVHKPS 127
                 R+LG++AHS+ HKPS
Sbjct:   159 QYSNRTLGIQAHSMSHKPS 177

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2146960 ZFP3 "AT5G25160" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 48/89 (53%), Positives = 56/89 (62%)

Query:    57 TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMM---TMMG-------LP 106
             T  K+FSCN+C R F+SSQALGGHQNAHKRER  AKR   QRM    +  G       LP
Sbjct:    56 TEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR--GQRMAASASAFGHPYGFSPLP 113

Query:   107 VHT--NMVRSLGVRAHSLVHK-PSRDGAG 132
              H   N  RSLG++AHS+ HK  S +G G
Sbjct:   114 FHGQYNNHRSLGIQAHSISHKLSSYNGFG 142

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2025777 ZFP1 "AT1G80730" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 37/65 (56%), Positives = 44/65 (67%)

Query:    42 NSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMT 101
             +S STS       +    +VFSCN+C RKF+SSQALGGHQNAHKRER  AKR Q  +M T
Sbjct:    48 SSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKM-T 106

Query:   102 MMGLP 106
             +  LP
Sbjct:   107 LSSLP 111

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009640 "photomorphogenesis" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2159088 KNU "AT5G14010" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 27/42 (64%), Positives = 34/42 (80%)

Query:    52 SPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKR 93
             S A P + ++F C +C RKF++SQALGGHQNAHKRER AA+R
Sbjct:    28 SSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010582 "floral meristem determinacy" evidence=IMP

TAIR|locus:2174547 ZFP2 "AT5G57520" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 34/63 (53%), Positives = 42/63 (66%)

Query:    35 LNLKL----GGNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA 90
             LNL+L       S S+S   +S +     +VFSCN+C RKF+SSQALGGHQNAHK ER  
Sbjct:    21 LNLELVLEPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTL 80

Query:    91 AKR 93
             AK+
Sbjct:    81 AKK 83

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2019723 ZFP6 "AT1G67030" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 37/83 (44%), Positives = 50/83 (60%)

Query:    36 NLKLGG-NSLSTS--RDPDSPARP-----TTAKVFSCNFCMRKFFSSQALGGHQNAHKRE 87
             +LKL G N L T+  ++  S  RP     + ++ + C +C R+F +SQALGGHQNAHK+E
Sbjct:     7 SLKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKE 66

Query:    88 RGAAKRYQSQRMMTMMGLPVHTN 110
             R   KR Q   M+   GLP H N
Sbjct:    67 RQLLKRAQ---MLATRGLPRHHN 86

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2156529 LATE "LATE FLOWERING" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 28/55 (50%), Positives = 38/55 (69%)

Query:    40 GGNSLSTSRDPDSPARPTTA-KVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKR 93
             G   +  S++ +     T++ ++F C FC RKF SSQALGGHQNAHK+ER AA+R
Sbjct:    12 GEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARR 66

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0042752 "regulation of circadian rhythm" evidence=IMP

GO:0048579 "negative regulation of long-day photoperiodism, flowering" evidence=IMP

TAIR|locus:2181007 AT5G01860 "AT5G01860" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 24/35 (68%), Positives = 30/35 (85%)

Query:    59 AKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKR 93
             A+VF+C FC ++F +SQALGGHQNAHK+ER  AKR
Sbjct:    64 ARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKR 98

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_IX000697 hypothetical protein (190 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	187
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.39
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.3
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.66
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.46
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.39
KOG3576	267	consensus Ovo and related transcription factors [T	98.33
KOG3576	267	consensus Ovo and related transcription factors [T	98.25
PHA00616	44	hypothetical protein	98.2
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.09
PHA02768	55	hypothetical protein; Provisional	97.94
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	97.94
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.75
PHA00733	128	hypothetical protein	97.57
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.42
KOG3608	467	consensus Zn finger proteins [General function pre	97.39
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.28
KOG3608	467	consensus Zn finger proteins [General function pre	97.04
PHA02768	55	hypothetical protein; Provisional	96.96
smart00355	26	ZnF_C2H2 zinc finger.	96.87
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.49
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	96.42
PHA00733	128	hypothetical protein	96.32
PHA00732	79	hypothetical protein	95.7
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.64
KOG3993	500	consensus Transcription factor (contains Zn finger	95.17
PLN03086	567	PRLI-interacting factor K; Provisional	94.95
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.56
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.43
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.91
PHA00732	79	hypothetical protein	93.01
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.01
COG5189	423	SFP1 Putative transcriptional repressor regulating	90.32
PHA00616	44	hypothetical protein	90.18
COG5189	423	SFP1 Putative transcriptional repressor regulating	89.62
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	89.24
PLN03086	567	PRLI-interacting factor K; Provisional	86.8
PRK04860	160	hypothetical protein; Provisional	86.55
KOG3993	500	consensus Transcription factor (contains Zn finger	86.35
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	84.45
COG5048	467	FOG: Zn-finger [General function prediction only]	84.1
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	81.92
COG4049	65	Uncharacterized protein containing archaeal-type C	81.74

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.39  E-value=1.8e-13  Score=113.14  Aligned_cols=86  Identities=26%  Similarity=0.389  Sum_probs=59.6

Q ss_pred             CCCCCCCCCCCCCC-CCCC---CCCccccCcccccccCchhHHHHHhhhcC-------CCCCcccccc-hhhHhhcCC-C
Q 043322           40 GGNSLSTSRDPDSP-ARPT---TAKVFSCNFCMRKFFSSQALGGHQNAHKR-------ERGAAKRYQS-QRMMTMMGL-P  106 (187)
Q Consensus        40 ~~~sF~~~~~L~~h-~~Ht---gekpf~C~~Cgk~F~~~~~L~~H~~~H~g-------ekp~~f~~~s-~l~r~Htge-p  106 (187)
                      .|+.+++.++|.+| ++|-   ..+.+.|.+|+|.|.+..+|..|+++|+-       .|.|...|.. -|+|+|||| |
T Consensus       136 Cgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKP  215 (279)
T KOG2462|consen  136 CGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTGEKP  215 (279)
T ss_pred             cccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccccCCCC
Confidence            55677788888777 4553   35678888888888888888888888872       1222222222 237888888 7


Q ss_pred             C-----CCCCCCchhhHhhhccCC
Q 043322          107 V-----HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       107 ~-----gk~F~~~s~L~~H~riH~  125 (187)
                      |     +|+|..+++|+.||.+|.
T Consensus       216 F~C~hC~kAFADRSNLRAHmQTHS  239 (279)
T KOG2462|consen  216 FSCPHCGKAFADRSNLRAHMQTHS  239 (279)
T ss_pred             ccCCcccchhcchHHHHHHHHhhc
Confidence            7     788888888888888873

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.30  E-value=7.2e-13  Score=109.53  Aligned_cols=82  Identities=20%  Similarity=0.162  Sum_probs=66.6

Q ss_pred             CCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC-CC
Q 043322           40 GGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL-PV  107 (187)
Q Consensus        40 ~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge-p~  107 (187)
                      .++.|..-..|..| ++|+  -+++|.+|||.|....-|++|+|+|+|||||       +|..+++|   |++|.+. +|
T Consensus       167 C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~  244 (279)
T KOG2462|consen  167 CGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKH  244 (279)
T ss_pred             CCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccc
Confidence            34455555566777 6776  6899999999999999999999999999999       66666665   8899887 77


Q ss_pred             -----CCCCCCchhhHhhhcc
Q 043322          108 -----HTNMVRSLGVRAHSLV  123 (187)
Q Consensus       108 -----gk~F~~~s~L~~H~ri  123 (187)
                           +|.|...+-|.+|...
T Consensus       245 qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  245 QCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cCcchhhHHHHHHHHHHhhhh
Confidence                 9999999999999743

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.66  E-value=8.4e-09  Score=96.00  Aligned_cols=76  Identities=24%  Similarity=0.357  Sum_probs=59.6

Q ss_pred             CCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCC----CCCCCCchhh
Q 043322           43 SLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPV----HTNMVRSLGV  117 (187)
Q Consensus        43 sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~----gk~F~~~s~L  117 (187)
                      -.+..+.|+.| ++|+|||||+|.+||++|.++.+|+.|+.+|...-|+  |....       -|+    -+.|...-.|
T Consensus       614 VlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~--R~q~S-------cP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  614 VLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPA--RVQFS-------CPSTFICQKKFTNAVTL  684 (958)
T ss_pred             cccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccc--ccccc-------CCchhhhcccccccccc
Confidence            34566778888 9999999999999999999999999999999865554  11100       021    4668888899


Q ss_pred             HhhhccCCCC
Q 043322          118 RAHSLVHKPS  127 (187)
Q Consensus       118 ~~H~riH~p~  127 (187)
                      ..|+++|.+.
T Consensus       685 pQhIriH~~~  694 (958)
T KOG1074|consen  685 PQHIRIHLGG  694 (958)
T ss_pred             cceEEeecCC
Confidence            9999999744

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.46  E-value=1e-07  Score=87.85  Aligned_cols=34  Identities=24%  Similarity=0.530  Sum_probs=28.7

Q ss_pred             CCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           57 TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        57 tgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      +.+.+|.|+.|.|.|...+.|.+|.--|+|.|||
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPy  923 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPY  923 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcCCCCc
Confidence            4456888999998888888888888888888887

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.39  E-value=3.6e-08  Score=90.81  Aligned_cols=72  Identities=13%  Similarity=0.176  Sum_probs=61.7

Q ss_pred             cCCCCCCCCCCCCCCC-CCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhh
Q 043322           39 LGGNSLSTSRDPDSPA-RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGV  117 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h~-~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L  117 (187)
                      ++++.|...+.|.+|+ -|+|.|||+|.+|.|+|..+..|..|+|.|.|||||.+..            .+|.|..+...
T Consensus       899 qCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdK------------ClKRFSHSGSY  966 (1007)
T KOG3623|consen  899 QCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDK------------CLKRFSHSGSY  966 (1007)
T ss_pred             HHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhh------------hhhhcccccch
Confidence            3566898889999996 5999999999999999999999999999999999983221            26788888889


Q ss_pred             Hhhhc
Q 043322          118 RAHSL  122 (187)
Q Consensus       118 ~~H~r  122 (187)
                      .+||.
T Consensus       967 SQHMN  971 (1007)
T KOG3623|consen  967 SQHMN  971 (1007)
T ss_pred             Hhhhc
Confidence            99983

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.33  E-value=7.1e-08  Score=77.19  Aligned_cols=59  Identities=19%  Similarity=0.298  Sum_probs=38.3

Q ss_pred             CcceeeccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           32 GEWLNLKLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        32 ~~~l~l~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      .+-+.-.++++.|....-|++| +.|...|.|-|..|||.|...-.|.+|.|+|+|-|||
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpy  174 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPY  174 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCcccc
Confidence            3344445566666665556666 4566666677777777777777777777777777776

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.25  E-value=1.6e-07  Score=75.15  Aligned_cols=63  Identities=19%  Similarity=0.358  Sum_probs=41.2

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCCCCC-------ccccc---chhhHhhcCC-CC-----CCCCCCchhhHhhh
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQ---SQRMMTMMGL-PV-----HTNMVRSLGVRAHS  121 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~---s~l~r~Htge-p~-----gk~F~~~s~L~~H~  121 (187)
                      ...|.|.+|+|+|.-..-|.+|++.|..-|.|       .|...   ..++|+|+|- ||     +|+|++...|..|.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            45699999999999999999999999865544       11111   1124555555 55     55555555555553

>PHA00616 hypothetical protein

Probab=98.20  E-value=5.2e-07  Score=55.16  Aligned_cols=30  Identities=13%  Similarity=0.253  Sum_probs=28.9

Q ss_pred             ccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ||+|..||+.|...+.|..|++.|+|++++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            699999999999999999999999999987

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.09  E-value=9.9e-08  Score=52.11  Aligned_cols=24  Identities=21%  Similarity=0.470  Sum_probs=19.9

Q ss_pred             CCCC-CCCCCCCccccCcccccccC
Q 043322           50 PDSP-ARPTTAKVFSCNFCMRKFFS   73 (187)
Q Consensus        50 L~~h-~~Htgekpf~C~~Cgk~F~~   73 (187)
                      |..| ++|++++||.|++|++.|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            3445 67999999999999999964

...

>PHA02768 hypothetical protein; Provisional

Probab=97.94  E-value=4.6e-06  Score=53.45  Aligned_cols=25  Identities=16%  Similarity=0.491  Sum_probs=23.8

Q ss_pred             ccccCcccccccCchhHHHHHhhhc
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      -|+|+.||+.|...++|..|+++|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~   29 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN   29 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC
Confidence            4899999999999999999999998

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=97.94  E-value=2.4e-06  Score=80.02  Aligned_cols=68  Identities=19%  Similarity=0.200  Sum_probs=52.1

Q ss_pred             ccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCCCCCCCCccCCCCC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDA  140 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~~~~~~~~~~f~~~  140 (187)
                      ...|..||+.|.++.+|..|+++|+++|||...+            .++.|..+..|+.||.+|.-.....+.|.+-..+
T Consensus       879 ~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~f------------C~~aFttrgnLKvHMgtH~w~q~~srrG~~~~~~  946 (958)
T KOG1074|consen  879 AHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHF------------CEEAFTTRGNLKVHMGTHMWVQPPSRRGPSPFIG  946 (958)
T ss_pred             hhhhccchhcccchHHHHHhhhcCCCCCCccchh------------hhhhhhhhhhhhhhhccccccCCCccCCCCcccC
Confidence            3679999999999999999999999999984333            2678999999999999996443333335554433

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.75  E-value=1.3e-05  Score=41.96  Aligned_cols=23  Identities=30%  Similarity=0.675  Sum_probs=21.5

Q ss_pred             cccCcccccccCchhHHHHHhhh
Q 043322           62 FSCNFCMRKFFSSQALGGHQNAH   84 (187)
Q Consensus        62 f~C~~Cgk~F~~~~~L~~H~~~H   84 (187)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00733 hypothetical protein

Probab=97.57  E-value=5.5e-05  Score=56.86  Aligned_cols=56  Identities=14%  Similarity=0.194  Sum_probs=39.2

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVH  124 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH  124 (187)
                      .+.+.+||.|+.|++.|.+...|..|+++|.  .+|..            ...++.|.....|..|++..
T Consensus        67 ~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~--~~~~C------------~~CgK~F~~~~sL~~H~~~~  122 (128)
T PHA00733         67 TSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE--HSKVC------------PVCGKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             ccCCCCCccCCCCCCcCCCHHHHHHHHhcCC--cCccC------------CCCCCccCCHHHHHHHHHHh
Confidence            4455788888888888888888888887652  22210            01278888888888887543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.42  E-value=6.5e-05  Score=40.80  Aligned_cols=25  Identities=36%  Similarity=0.630  Sum_probs=23.4

Q ss_pred             ccccCcccccccCchhHHHHHhhhc
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998875

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.39  E-value=4.8e-05  Score=65.57  Aligned_cols=124  Identities=16%  Similarity=0.195  Sum_probs=78.7

Q ss_pred             CCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhc--CCCCC-----ccccc-----chhhHhhcCC--
Q 043322           41 GNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHK--RERGA-----AKRYQ-----SQRMMTMMGL--  105 (187)
Q Consensus        41 ~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~--gekp~-----~f~~~-----s~l~r~Htge--  105 (187)
                      -+.|..++.|+.| +.|+++|...|+.||.-|.+...|-.|.+..+  ...+|     .+++.     ..+++.|..-  
T Consensus       186 t~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~yk  265 (467)
T KOG3608|consen  186 TKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYK  265 (467)
T ss_pred             hhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhccc
Confidence            3478888899988 88999999999999999999999999987554  23456     12221     1124444332  


Q ss_pred             -CC-CCCCCCchhhHhhhcc-C---CCCCCCCCCccCCCCC-----CCCCCCCCCcccccc--c-CCCcCCCCcc
Q 043322          106 -PV-HTNMVRSLGVRAHSLV-H---KPSRDGAGVGARFNDA-----DTGFGMAWTPYVLEE--A-TDVMWPGSFR  166 (187)
Q Consensus       106 -p~-gk~F~~~s~L~~H~ri-H---~p~~~~~~~~~~f~~~-----~~~~~~~~~p~~~~~--~-~~~~wp~s~~  166 (187)
                       |. .......+.|..|++. |   +|.+|.. |..+|..-     +..+|. ..-|.|+-  + -+++|--+++
T Consensus       266 CplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~-Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~  338 (467)
T KOG3608|consen  266 CPLCDMTCSSASSLTTHIRYRHSKDKPFKCDE-CDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMR  338 (467)
T ss_pred             ccccccCCCChHHHHHHHHhhhccCCCccccc-hhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHH
Confidence             33 6677788889999876 3   3445532 34443322     223444 44577775  2 2556654443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.28  E-value=0.00015  Score=37.67  Aligned_cols=23  Identities=35%  Similarity=0.722  Sum_probs=19.6

Q ss_pred             cccCcccccccCchhHHHHHhhh
Q 043322           62 FSCNFCMRKFFSSQALGGHQNAH   84 (187)
Q Consensus        62 f~C~~Cgk~F~~~~~L~~H~~~H   84 (187)
                      |.|++|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999876

...

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.04  E-value=0.00025  Score=61.22  Aligned_cols=81  Identities=19%  Similarity=0.260  Sum_probs=59.9

Q ss_pred             CCCCCCCCCCC-C-CCCCCCccccCcccccccCchhHHHHHhhhcCCCCC---------cccccchh---hH-hhcCC--
Q 043322           43 SLSTSRDPDSP-A-RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA---------AKRYQSQR---MM-TMMGL--  105 (187)
Q Consensus        43 sF~~~~~L~~h-~-~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~---------~f~~~s~l---~r-~Htge--  105 (187)
                      +....++|..| + .|...|||+|+.|.+.|.+.+.|.+|..+|+ +..|         .+++..++   ++ .|-|.  
T Consensus       272 tc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np  350 (467)
T KOG3608|consen  272 TCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNP  350 (467)
T ss_pred             CCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCC
Confidence            55566778888 3 4888999999999999999999999999998 3334         33333222   33 34454  


Q ss_pred             -CC-----CCCCCCchhhHhhhc-cC
Q 043322          106 -PV-----HTNMVRSLGVRAHSL-VH  124 (187)
Q Consensus       106 -p~-----gk~F~~~s~L~~H~r-iH  124 (187)
                       +|     .+.|++-.+|..|.+ .|
T Consensus       351 ~~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  351 ILYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             CceeeecchhhhccchhHHHHHHHhh
Confidence             45     889999999999964 44

>PHA02768 hypothetical protein; Provisional

Probab=96.96  E-value=7.3e-05  Score=47.91  Aligned_cols=38  Identities=8%  Similarity=0.068  Sum_probs=32.9

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHH
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALG   78 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~   78 (187)
                      ..|+.|+...+|..| ++|+  ++|+|..|+|.|...+.|.
T Consensus        10 ~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768         10 ICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             hhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            468899999999988 6888  7999999999999877664

>smart00355 ZnF_C2H2 zinc finger

Probab=96.87  E-value=0.00068  Score=35.45  Aligned_cols=24  Identities=33%  Similarity=0.591  Sum_probs=22.0

Q ss_pred             cccCcccccccCchhHHHHHhhhc
Q 043322           62 FSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        62 f~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            679999999999999999998775

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.49  E-value=0.0021  Score=40.42  Aligned_cols=34  Identities=15%  Similarity=0.259  Sum_probs=24.5

Q ss_pred             CCCCCccccCcccccccCchhHHHHHhhhcCCCC
Q 043322           56 PTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERG   89 (187)
Q Consensus        56 Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp   89 (187)
                      +..+.|-.|++|+..+.++.+|++|+.++.+.||
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            4567899999999999999999999988777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=96.42  E-value=0.00092  Score=36.19  Aligned_cols=23  Identities=22%  Similarity=0.300  Sum_probs=18.3

Q ss_pred             hhHhhhccCCCCCCCCCCccCCCCCCCCCCCCCCcccccc-cCCC
Q 043322          116 GVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEE-ATDV  159 (187)
Q Consensus       116 ~L~~H~riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~~-~~~~  159 (187)
                      +|..|+++|                     +|++||.|+. ++.|
T Consensus         1 ~l~~H~~~H---------------------~~~k~~~C~~C~k~F   24 (26)
T PF13465_consen    1 NLRRHMRTH---------------------TGEKPYKCPYCGKSF   24 (26)
T ss_dssp             HHHHHHHHH---------------------SSSSSEEESSSSEEE
T ss_pred             CHHHHhhhc---------------------CCCCCCCCCCCcCee
Confidence            478899888                     8889999998 4454

...

>PHA00733 hypothetical protein

Probab=96.32  E-value=0.0014  Score=49.25  Aligned_cols=45  Identities=16%  Similarity=0.159  Sum_probs=37.0

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhc
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      ..++.|.....|..| +.|  +.+|.|..|++.|.....|..|+....
T Consensus        78 ~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         78 LCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            367789998888887 444  467999999999999999999987543

>PHA00732 hypothetical protein

Probab=95.70  E-value=0.0061  Score=42.01  Aligned_cols=25  Identities=28%  Similarity=0.478  Sum_probs=19.2

Q ss_pred             ccccCcccccccCchhHHHHHhh-hc
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNA-HK   85 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~-H~   85 (187)
                      ||.|..|++.|.+...|..|++. |.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~   26 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT   26 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC
Confidence            57788888888888888888763 54

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.64  E-value=0.0048  Score=32.59  Aligned_cols=23  Identities=30%  Similarity=0.706  Sum_probs=20.8

Q ss_pred             cccCcccccccCchhHHHHHhhh
Q 043322           62 FSCNFCMRKFFSSQALGGHQNAH   84 (187)
Q Consensus        62 f~C~~Cgk~F~~~~~L~~H~~~H   84 (187)
                      |.|..|.+.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999998754

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=95.17  E-value=0.01  Score=52.48  Aligned_cols=93  Identities=20%  Similarity=0.265  Sum_probs=56.7

Q ss_pred             CcceeeccCCCCCCCCCCCCCCCCC-CCCCccccCcccccccCchhHHHHHhhhcCCCCCc-------ccccch--h--h
Q 043322           32 GEWLNLKLGGNSLSTSRDPDSPARP-TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA-------KRYQSQ--R--M   99 (187)
Q Consensus        32 ~~~l~l~~~~~sF~~~~~L~~h~~H-tgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~-------f~~~s~--l--~   99 (187)
                      |++++- |+.-.|...-.|..|+.- .-.--|+|++|+|.|....+|..|.|-|+-...-+       ......  .  .
T Consensus       266 GdyiCq-LCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  266 GDYICQ-LCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHH-HHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            455442 223356555667777421 11124999999999999999999999997322111       111000  1  0


Q ss_pred             HhhcCC-----CC-----CCCCCCchhhHhhhccCC
Q 043322          100 MTMMGL-----PV-----HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       100 r~Htge-----p~-----gk~F~~~s~L~~H~riH~  125 (187)
                      ..-.|.     -|     +|.|.+..-|++|+.+|.
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence            010111     12     999999999999999885

>PLN03086 PRLI-interacting factor K; Provisional

Probab=94.95  E-value=0.013  Score=54.07  Aligned_cols=55  Identities=13%  Similarity=0.148  Sum_probs=35.8

Q ss_pred             CCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCCCC
Q 043322           58 TAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRD  129 (187)
Q Consensus        58 gekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~~~  129 (187)
                      .++.+.|+.|++.|. ...|..|+.+|+  +++.+.             .|+.+ .+..|..|+.+|.|.+.
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-------------Cg~~~-~R~~L~~H~~thCp~Kp  504 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-------------CGVVL-EKEQMVQHQASTCPLRL  504 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-------------CCCCc-chhHHHhhhhccCCCCc
Confidence            345678999999996 577999998874  454221             13323 34667777777765543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.56  E-value=0.012  Score=31.80  Aligned_cols=22  Identities=32%  Similarity=0.629  Sum_probs=20.1

Q ss_pred             cccCcccccccCchhHHHHHhh
Q 043322           62 FSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        62 f~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      |.|..|++.|.+...+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999864

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.43  E-value=0.025  Score=30.28  Aligned_cols=21  Identities=33%  Similarity=0.736  Sum_probs=17.6

Q ss_pred             cccCcccccccCchhHHHHHhh
Q 043322           62 FSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        62 f~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      ..|+.||+.| ....|..|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 67789999864

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.91  E-value=0.031  Score=29.18  Aligned_cols=23  Identities=22%  Similarity=0.468  Sum_probs=17.9

Q ss_pred             cccCcccccccCchhHHHHHhhhc
Q 043322           62 FSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        62 f~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      |.|+.|..... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998887 889999988754

>PHA00732 hypothetical protein

Probab=93.01  E-value=0.024  Score=38.99  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=31.3

Q ss_pred             cCCCCCCCCCCCCCCC--CCCCCCccccCcccccccCchhHHHHHhhhc
Q 043322           39 LGGNSLSTSRDPDSPA--RPTTAKVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h~--~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      ..+..|.....|..|.  .|.   ++.|+.|++.|.   .|..|.+++.
T Consensus         6 ~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          6 ICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            3577899999999884  355   468999999998   4778876544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.01  E-value=0.086  Score=29.82  Aligned_cols=23  Identities=22%  Similarity=0.514  Sum_probs=20.4

Q ss_pred             ccccCcccccccCchhHHHHHhh
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      +|.|.+|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999763

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=90.32  E-value=0.3  Score=42.08  Aligned_cols=25  Identities=24%  Similarity=0.507  Sum_probs=22.4

Q ss_pred             CCCccccCc--ccccccCchhHHHHHh
Q 043322           58 TAKVFSCNF--CMRKFFSSQALGGHQN   82 (187)
Q Consensus        58 gekpf~C~~--Cgk~F~~~~~L~~H~~   82 (187)
                      ++|||+|++  |.|++.....|+.|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhh
Confidence            469999998  9999999999999965

>PHA00616 hypothetical protein

Probab=90.18  E-value=0.1  Score=31.90  Aligned_cols=18  Identities=17%  Similarity=0.015  Sum_probs=16.6

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      |+.|..++.|..|++.|+
T Consensus         8 G~~F~~~s~l~~H~r~~h   25 (44)
T PHA00616          8 GGIFRKKKEVIEHLLSVH   25 (44)
T ss_pred             hHHHhhHHHHHHHHHHhc
Confidence            889999999999999983

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=89.62  E-value=0.1  Score=44.82  Aligned_cols=23  Identities=22%  Similarity=0.589  Sum_probs=21.0

Q ss_pred             CCccccCcccccccCchhHHHHH
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQ   81 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~   81 (187)
                      .|||.|++|+|++.....|+.|.
T Consensus       396 ~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         396 DKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CCceeccccchhhccCccceecc
Confidence            48999999999999999999885

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=89.24  E-value=0.24  Score=34.10  Aligned_cols=24  Identities=33%  Similarity=0.732  Sum_probs=21.3

Q ss_pred             ccccCcccccccCchhHHHHHhhh
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAH   84 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H   84 (187)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            689999999999999999999864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=86.80  E-value=0.29  Score=45.39  Aligned_cols=47  Identities=13%  Similarity=0.173  Sum_probs=36.0

Q ss_pred             CCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcc
Q 043322           41 GNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAK   92 (187)
Q Consensus        41 ~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f   92 (187)
                      +..|. ...|..| .+|+  +++.|+ ||+.+ .+..|..|+.+|.+++++.+
T Consensus       460 gk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C  507 (567)
T PLN03086        460 GQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITC  507 (567)
T ss_pred             CCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeC
Confidence            44564 4667777 4553  899999 99755 67899999999999999833

>PRK04860 hypothetical protein; Provisional

Probab=86.55  E-value=0.42  Score=37.25  Aligned_cols=27  Identities=15%  Similarity=0.324  Sum_probs=23.7

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      -+|.|. |++   ....+.+|.++|+++++|
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~Y  144 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVY  144 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccE
Confidence            479998 998   677789999999999998

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=86.35  E-value=0.21  Score=44.48  Aligned_cols=25  Identities=40%  Similarity=0.717  Sum_probs=23.1

Q ss_pred             ccccCcccccccCchhHHHHHhhhc
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      .|.|.+|+|+|.....|+.|+.+|.
T Consensus       356 i~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  356 IFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             eeecHHhhhhhHHHHHHHHhHHhhh
Confidence            4899999999999999999998875

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=84.45  E-value=0.88  Score=28.59  Aligned_cols=26  Identities=35%  Similarity=0.713  Sum_probs=20.0

Q ss_pred             ccccCcccccccCchhHHHHHhh-hcCC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNA-HKRE   87 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~-H~ge   87 (187)
                      .|.|++|++ -.+...|..|... |..+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~   28 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSE   28 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCC
Confidence            489999999 5567889999664 5544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=84.10  E-value=0.68  Score=39.51  Aligned_cols=49  Identities=29%  Similarity=0.312  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCCC-C--CCCCC--CccccC--cccccccCchhHHHHHhhhcCCCCC
Q 043322           42 NSLSTSRDPDSP-A--RPTTA--KVFSCN--FCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        42 ~sF~~~~~L~~h-~--~Htge--kpf~C~--~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ..|+....|..| +  .|+++  +|+.|+  .|++.|.....+..|...|.+-+++
T Consensus       297 ~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (467)
T COG5048         297 ISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPA  352 (467)
T ss_pred             CCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcc
Confidence            367777888877 5  68888  899999  7999999999999999888876654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=81.92  E-value=0.58  Score=32.17  Aligned_cols=62  Identities=16%  Similarity=0.199  Sum_probs=15.7

Q ss_pred             ccCcccccccCchhHHHHHhh-hcCCCCC--cccccchh---h--HhhcCC--CC-CCCCCCchhhHhhhccC
Q 043322           63 SCNFCMRKFFSSQALGGHQNA-HKRERGA--AKRYQSQR---M--MTMMGL--PV-HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus        63 ~C~~Cgk~F~~~~~L~~H~~~-H~gekp~--~f~~~s~l---~--r~Htge--p~-gk~F~~~s~L~~H~riH  124 (187)
                      +|..|+..|.+...|..|+.. |.-..+-  .......+   .  .+....  ++ ++.|.....|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            599999999999999999864 4322221  00011111   1  111101  33 88899999999999875

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=81.74  E-value=0.56  Score=30.15  Aligned_cols=29  Identities=17%  Similarity=0.229  Sum_probs=25.6

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhh
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      ...||--+.|+-|+..|.......+|.+.
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            45678889999999999999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	187
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	5e-18

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 72.5 bits (178), Expect = 5e-18
 Identities = 16/33 (48%), Positives = 25/33 (75%)

Query: 60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGAAK 92
          + ++C+FC R+F S+QALGGH N H+R+R   +
Sbjct: 5  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	187
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.59
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.53
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.46
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.43
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.4
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.32
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.29
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.28
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.27
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.26
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.26
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.25
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.24
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.24
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.24
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.23
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.23
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.22
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.21
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.17
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.15
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.14
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.14
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.13
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.13
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.12
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.1
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.03
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.03
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.03
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.02
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.02
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.01
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.01
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.01
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.01
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.0
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.0
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.98
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.97
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.96
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.96
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.96
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.95
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.95
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.95
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.94
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.94
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.94
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.94
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.93
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.93
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.9
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.9
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.86
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.86
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.86
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.83
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.81
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.81
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.79
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.79
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.79
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.79
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.79
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.78
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.78
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.77
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.77
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.73
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.71
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.7
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.7
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.7
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.7
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.68
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.67
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.67
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.67
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.66
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.65
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.62
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.61
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.61
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.59
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.58
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.57
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.56
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.55
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.54
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.53
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.52
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.5
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.49
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.48
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.48
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.47
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.46
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.82
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.44
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.8
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.42
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.42
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.4
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.4
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.38
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.37
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.37
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.35
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.35
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.33
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.32
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.31
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.3
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.22
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.51
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.19
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.08
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.01
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.93
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.92
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.91
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.9
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.87
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.86
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	97.85
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.85
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.84
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.84
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.83
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.83
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.82
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.82
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.81
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.8
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.8
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.79
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.79
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	97.79
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.79
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.79
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.78
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.78
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.78
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.76
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.76
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.74
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.74
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.73
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	97.71
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.7
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.7
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.7
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	97.7
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.69
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.69
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	97.67
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.66
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.66
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.65
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.64
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.64
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.64
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.63
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.62
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.62
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.62
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.61
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	97.61
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.61
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	97.61
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.6
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.6
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.6
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.6
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.58
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.58
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	97.58
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.58
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.57
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.57
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.57
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.56
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.56
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	97.55
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.55
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	97.54
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.53
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	97.53
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.51
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	97.51
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.5
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.49
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.49
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.49
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.48
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.48
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.48
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.48
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.48
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.48
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	97.47
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.47
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.44
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.43
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.43
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.43
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	97.4
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.39
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.37
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	97.35
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	97.35
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.33
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.27
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	97.25
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.24
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.16
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	97.11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.06
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	96.95
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	96.95
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	96.93
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.86
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.64
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	96.59
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	96.54
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	96.13
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	96.1
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.02
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.56
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.42
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	95.37
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.32
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.32
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	95.31
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.2
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.17
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	95.15
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.09
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	94.83
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.38
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	94.25
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.04
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	93.82
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	93.79
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	93.59
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	93.42
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	93.37
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	92.86
1ard_A	29	Yeast transcription factor ADR1; transcription reg	92.52
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	92.45
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	92.05
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	91.28
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	91.99
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	91.56
1paa_A	30	Yeast transcription factor ADR1; transcription reg	91.5
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	91.39
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.63
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	89.46
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	84.5

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.59  E-value=3.5e-16  Score=116.85  Aligned_cols=89  Identities=15%  Similarity=0.134  Sum_probs=74.4

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC-CC-----CCCCCCchhh
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL-PV-----HTNMVRSLGV  117 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge-p~-----gk~F~~~s~L  117 (187)
                      ++|.|+++|.|++|++.|.....|..|+++|++++||       .|.....|   +++|+++ ||     |+.|.+...|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            6799999999999999999999999999999999999       45554444   8899998 88     9999999999


Q ss_pred             HhhhccCCCCCCCCCCccCCCCCCCCCCCCCCcccccccC
Q 043322          118 RAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEAT  157 (187)
Q Consensus       118 ~~H~riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~~~~  157 (187)
                      ..|+++|++..+.               ...++|.|+.++
T Consensus        95 ~~H~~~hh~~~p~---------------~~~k~~~C~~C~  119 (133)
T 2lt7_A           95 SSHIKSVHSQDPS---------------GDSKLYRLHPCR  119 (133)
T ss_dssp             HHHHHHHTCCCTT---------------SSSCCEEECCCC
T ss_pred             HHHhHHhcCCCCC---------------CCCCCeecCCCC
Confidence            9999998655331               223678888843

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.53  E-value=8.7e-17  Score=125.00  Aligned_cols=136  Identities=20%  Similarity=0.237  Sum_probs=101.2

Q ss_pred             cceeeccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHh
Q 043322           33 EWLNLKLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMT  101 (187)
Q Consensus        33 ~~l~l~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~  101 (187)
                      .|.+. +.+..|.....|..| ++|.++++|.|+.|++.|.....|..|+++|.++++|       .|.....+   +++
T Consensus        21 ~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           21 PYACP-ECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             -----------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCcCC-CCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHh
Confidence            34443 567789998889888 6899999999999999999999999999999999998       34433333   788


Q ss_pred             hcCC-CC-----CCCCCCchhhHhhhccCCCCCCC--CCCccCCCCC-----CCCCCCCCCcccccc-cCCCcCCCCccc
Q 043322          102 MMGL-PV-----HTNMVRSLGVRAHSLVHKPSRDG--AGVGARFNDA-----DTGFGMAWTPYVLEE-ATDVMWPGSFRV  167 (187)
Q Consensus       102 Htge-p~-----gk~F~~~s~L~~H~riH~p~~~~--~~~~~~f~~~-----~~~~~~~~~p~~~~~-~~~~~wp~s~~~  167 (187)
                      |+++ +|     ++.|.+...|..|+++|.+.+..  ..++..|...     +..+|++++||.|+. ++.|....+|+.
T Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~  179 (190)
T 2i13_A          100 HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV  179 (190)
T ss_dssp             HHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHH
Confidence            8887 77     99999999999999999654332  3458888877     356788999999999 788888777766


Q ss_pred             cC
Q 043322          168 NL  169 (187)
Q Consensus       168 ~~  169 (187)
                      ..
T Consensus       180 H~  181 (190)
T 2i13_A          180 HQ  181 (190)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.46  E-value=2e-14  Score=93.32  Aligned_cols=57  Identities=25%  Similarity=0.363  Sum_probs=50.5

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~  127 (187)
                      ||||.|++||+.|.....|..|+++|+|++||....            .|+.|.+.+.|..|+++|++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~------------C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPE------------CGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTT------------TCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCC------------CCCCcCCHHHHHHHhCccCCC
Confidence            799999999999999999999999999999973221            289999999999999999754

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.43  E-value=1.9e-15  Score=117.33  Aligned_cols=114  Identities=19%  Similarity=0.227  Sum_probs=88.9

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC-
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL-  105 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge-  105 (187)
                      .+.+..|.....|..| ++|.++++|.|+.|++.|.+...|..|+++|.++++|       .|.....+   +++|+++ 
T Consensus        53 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  132 (190)
T 2i13_A           53 PECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK  132 (190)
T ss_dssp             TTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCC
T ss_pred             CCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            3567789888888888 6799999999999999999999999999999999998       34443333   8889988 


Q ss_pred             CC-----CCCCCCchhhHhhhccCCCCCCC--CCCccCCCCC-----CCCCCCCCCcc
Q 043322          106 PV-----HTNMVRSLGVRAHSLVHKPSRDG--AGVGARFNDA-----DTGFGMAWTPY  151 (187)
Q Consensus       106 p~-----gk~F~~~s~L~~H~riH~p~~~~--~~~~~~f~~~-----~~~~~~~~~p~  151 (187)
                      ||     ++.|.+...|..|+++|.+.++.  ..++..|...     +..+|+|++||
T Consensus       133 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          133 PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             CeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            77     99999999999999999654332  3458888877     46789999886

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=3.8e-13  Score=96.14  Aligned_cols=84  Identities=14%  Similarity=0.080  Sum_probs=69.2

Q ss_pred             CCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhh--hcCCCCC--------cc--cccchh---hHhhcCC-CC-
Q 043322           46 TSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNA--HKRERGA--------AK--RYQSQR---MMTMMGL-PV-  107 (187)
Q Consensus        46 ~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~--H~gekp~--------~f--~~~s~l---~r~Htge-p~-  107 (187)
                      ....|..| ++|++++||.|.+|++.|.....|..|+++  |.+++++        .|  .....+   +++|+++ || 
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            35678888 789999999999999999999999999999  7777765        23  333333   7889988 88 


Q ss_pred             ----CCCCCCchhhHhhhccCCCCCC
Q 043322          108 ----HTNMVRSLGVRAHSLVHKPSRD  129 (187)
Q Consensus       108 ----gk~F~~~s~L~~H~riH~p~~~  129 (187)
                          ++.|.+...|..|+++|.+...
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCccc
Confidence                9999999999999999866533

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.32  E-value=3e-12  Score=95.94  Aligned_cols=98  Identities=15%  Similarity=0.139  Sum_probs=59.7

Q ss_pred             CCCCccccCcccccccCchhHHHHHhh-hcCCCC--------C-------cccccch---hhHhhcCC-CC-------CC
Q 043322           57 TTAKVFSCNFCMRKFFSSQALGGHQNA-HKRERG--------A-------AKRYQSQ---RMMTMMGL-PV-------HT  109 (187)
Q Consensus        57 tgekpf~C~~Cgk~F~~~~~L~~H~~~-H~gekp--------~-------~f~~~s~---l~r~Htge-p~-------gk  109 (187)
                      ....+|.|..|++.|.+...|..|+++ |.++++        |       .|.....   |+++|+++ ||       ++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            344556666666666666666666554 544432        2       1222222   24455544 33       67


Q ss_pred             CCCCchhhHhhhccCCCC---CCCC-CCccCCCCC-----CCCCCCCCCccccc
Q 043322          110 NMVRSLGVRAHSLVHKPS---RDGA-GVGARFNDA-----DTGFGMAWTPYVLE  154 (187)
Q Consensus       110 ~F~~~s~L~~H~riH~p~---~~~~-~~~~~f~~~-----~~~~~~~~~p~~~~  154 (187)
                      .|.+...|..|+++|...   .|.. .++++|...     +.++|++++||.|+
T Consensus       101 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          101 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             EESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            888888888888888654   3432 367888766     46788888998885

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.29  E-value=1.5e-13  Score=106.55  Aligned_cols=132  Identities=13%  Similarity=0.116  Sum_probs=93.4

Q ss_pred             Ccceee-ccCCCCCCCCCCCCCC-CCCCCCCcccc--CcccccccCchhHHHHHhhhcCCCCCc---------ccccchh
Q 043322           32 GEWLNL-KLGGNSLSTSRDPDSP-ARPTTAKVFSC--NFCMRKFFSSQALGGHQNAHKRERGAA---------KRYQSQR   98 (187)
Q Consensus        32 ~~~l~l-~~~~~sF~~~~~L~~h-~~Htgekpf~C--~~Cgk~F~~~~~L~~H~~~H~gekp~~---------f~~~s~l   98 (187)
                      ..+..- ...+..|.....|..| ++|+++++|.|  ..|++.|.+...|..|+++|.++++|.         |.....+
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHH
Confidence            334442 3567889988888888 67999999999  889999999999999999999998872         2222222


Q ss_pred             ---h-Hhhc-CC-CC-------CCCCCCchhhHhhhccCCCCCCCCC----CccCCCCC-----CCCCCCCCCcccccc-
Q 043322           99 ---M-MTMM-GL-PV-------HTNMVRSLGVRAHSLVHKPSRDGAG----VGARFNDA-----DTGFGMAWTPYVLEE-  155 (187)
Q Consensus        99 ---~-r~Ht-ge-p~-------gk~F~~~s~L~~H~riH~p~~~~~~----~~~~f~~~-----~~~~~~~~~p~~~~~-  155 (187)
                         + +.|. +. +|       ++.|.+...|..|+++|++.++..+    ++++|...     +.++|++   |.|.. 
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~  167 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKD  167 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCST
T ss_pred             HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCC
Confidence               4 4552 33 44       8889999999999999975544322    78888876     3567776   66665 


Q ss_pred             ---cCCCcCCCCcc
Q 043322          156 ---ATDVMWPGSFR  166 (187)
Q Consensus       156 ---~~~~~wp~s~~  166 (187)
                         +..|.....|+
T Consensus       168 ~~C~~~f~~~~~l~  181 (190)
T 1tf6_A          168 DSCSFVGKTWTLYL  181 (190)
T ss_dssp             TTCCCCCSCHHHHH
T ss_pred             CcCCCccccHHHHH
Confidence               33555444443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.28  E-value=3e-13  Score=97.69  Aligned_cols=88  Identities=18%  Similarity=0.243  Sum_probs=66.5

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcc---------cccch---hhHhhcCC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAK---------RYQSQ---RMMTMMGL  105 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f---------~~~s~---l~r~Htge  105 (187)
                      ..+..|.....|..| ++| ++++|.|.+|++.|.+...|..|+++|.++++|..         .....   ++++|+++
T Consensus        12 ~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   90 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   90 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCC
Confidence            467788888888888 567 88999999999999999999999999999988722         22222   26677776


Q ss_pred             -CC-------CCCCCCchhhHhhhccCCCC
Q 043322          106 -PV-------HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       106 -p~-------gk~F~~~s~L~~H~riH~p~  127 (187)
                       ||       ++.|.+...|..|+++|++.
T Consensus        91 ~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           91 RPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence             54       67788888888888777543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.27  E-value=7.1e-13  Score=94.73  Aligned_cols=68  Identities=22%  Similarity=0.448  Sum_probs=41.8

Q ss_pred             CCCCccccCc--ccccccCchhHHHHHhhhcCCCCCc---------ccccch---hhHhhcCC-CC-----CCCCCCchh
Q 043322           57 TTAKVFSCNF--CMRKFFSSQALGGHQNAHKRERGAA---------KRYQSQ---RMMTMMGL-PV-----HTNMVRSLG  116 (187)
Q Consensus        57 tgekpf~C~~--Cgk~F~~~~~L~~H~~~H~gekp~~---------f~~~s~---l~r~Htge-p~-----gk~F~~~s~  116 (187)
                      +++++|.|.+  |++.|.+...|..|+++|.++++|.         |.....   ++++|+++ +|     ++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4556677765  7777777777777766666666651         111122   25556555 54     677777777


Q ss_pred             hHhhhccC
Q 043322          117 VRAHSLVH  124 (187)
Q Consensus       117 L~~H~riH  124 (187)
                      |..|+++|
T Consensus        82 l~~H~~~h   89 (119)
T 2jp9_A           82 LKTHTRTH   89 (119)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            77777777

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.8e-12  Score=90.91  Aligned_cols=75  Identities=9%  Similarity=0.103  Sum_probs=60.8

Q ss_pred             CCCCCCCCCCC-CCCCCCCccccCccccccc-CchhHHHHHhhhcC-CCCCcccccchhhHhhcCCCCCCCCCCchhhHh
Q 043322           43 SLSTSRDPDSP-ARPTTAKVFSCNFCMRKFF-SSQALGGHQNAHKR-ERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRA  119 (187)
Q Consensus        43 sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~-~~~~L~~H~~~H~g-ekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~  119 (187)
                      ++.....+..| ++|+++++|.|.+|++.|. ....|..|+++|++ +++|...            ..++.|.+...|..
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~------------~C~k~F~~~~~L~~   72 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQ------------HCRKQFKSKAGLNY   72 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCS------------SSCCCCSCHHHHHH
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECC------------CCCCccCCHHHHHH
Confidence            45555666666 6899999999999999999 99999999999987 7665221            12899999999999


Q ss_pred             hhccCCCCCC
Q 043322          120 HSLVHKPSRD  129 (187)
Q Consensus       120 H~riH~p~~~  129 (187)
                      |+++|+..++
T Consensus        73 H~~~h~~~kp   82 (98)
T 2gqj_A           73 HTMAEHSAKP   82 (98)
T ss_dssp             HHHHHSCSCS
T ss_pred             HHHHHcCCCC
Confidence            9999965443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.26  E-value=1.4e-12  Score=93.65  Aligned_cols=33  Identities=27%  Similarity=0.432  Sum_probs=18.2

Q ss_pred             CCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           58 TAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        58 gekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++++|.|.+|++.|.....|..|+++|.++++|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   36 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPF   36 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSC
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCe
Confidence            445555555555555555555555555555554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=9.5e-12  Score=82.93  Aligned_cols=60  Identities=18%  Similarity=0.315  Sum_probs=51.6

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~  125 (187)
                      ..+.++++|.|.+|++.|.....|..|+++|.+++||....            .++.|.....|..|+++|+
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~------------C~~~f~~~~~L~~H~~~H~   70 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDE------------CGKAFIQRSHLIGHHRVHT   70 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSS------------SCCEESSHHHHHHHGGGSC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCC------------CCCccCCHHHHHHHHHHhC
Confidence            45778999999999999999999999999999988862211            2788999999999999993

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.24  E-value=2.6e-13  Score=97.02  Aligned_cols=85  Identities=21%  Similarity=0.253  Sum_probs=73.9

Q ss_pred             CCCCCCCCCCCCCC-CCCCCCCccccC--cccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC-
Q 043322           40 GGNSLSTSRDPDSP-ARPTTAKVFSCN--FCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL-  105 (187)
Q Consensus        40 ~~~sF~~~~~L~~h-~~Htgekpf~C~--~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge-  105 (187)
                      .+..|.....|..| ++|.++++|.|.  .|++.|.+...|..|+++|.++++|       .|.....+   +++|+++ 
T Consensus        14 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   93 (119)
T 2jp9_A           14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK   93 (119)
T ss_dssp             SCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCC
T ss_pred             CcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCC
Confidence            67789998899888 679999999999  7999999999999999999999998       34444333   8899987 


Q ss_pred             CC-------CCCCCCchhhHhhhccC
Q 043322          106 PV-------HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       106 p~-------gk~F~~~s~L~~H~riH  124 (187)
                      ||       ++.|.+...|..|+++|
T Consensus        94 ~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           94 PFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CeeCCCCCCccccCCHHHHHHHHhcC
Confidence            65       89999999999999987

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.24  E-value=7.6e-12  Score=86.24  Aligned_cols=74  Identities=16%  Similarity=0.174  Sum_probs=53.3

Q ss_pred             CCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccch---hhHhhcCC-CC-----CCCCCCchhhHh
Q 043322           56 PTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQ---RMMTMMGL-PV-----HTNMVRSLGVRA  119 (187)
Q Consensus        56 Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~---l~r~Htge-p~-----gk~F~~~s~L~~  119 (187)
                      +.+++||.|.+|++.|.....|..|+++|.++++|       .|.....   |+++|+++ +|     ++.|.....|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            45667777777777777777777777777777776       2332222   26667666 65     899999999999


Q ss_pred             hhccCCCCCC
Q 043322          120 HSLVHKPSRD  129 (187)
Q Consensus       120 H~riH~p~~~  129 (187)
                      |+++|++...
T Consensus        83 H~~~h~~~~~   92 (96)
T 2dmd_A           83 HLRSHTGDSG   92 (96)
T ss_dssp             HHTTCCSCCC
T ss_pred             HHHHhcCCCC
Confidence            9999976543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.24  E-value=1.7e-11  Score=86.08  Aligned_cols=74  Identities=28%  Similarity=0.369  Sum_probs=57.3

Q ss_pred             CCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccch---hhHhhcCC-CC-----CCCCCCchhhHh
Q 043322           56 PTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQ---RMMTMMGL-PV-----HTNMVRSLGVRA  119 (187)
Q Consensus        56 Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~---l~r~Htge-p~-----gk~F~~~s~L~~  119 (187)
                      ...+++|.|.+|++.|.....|..|+++|.++++|       .|.....   |+++|+++ +|     ++.|.+...|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            45577889999999999999999998888888887       3333333   26777777 66     889999999999


Q ss_pred             hhccCCCCCC
Q 043322          120 HSLVHKPSRD  129 (187)
Q Consensus       120 H~riH~p~~~  129 (187)
                      |+++|.....
T Consensus        92 H~~~H~~~~~  101 (106)
T 2ee8_A           92 HKTLHMQTSS  101 (106)
T ss_dssp             HHHHTTSCCC
T ss_pred             HHHHhCCCCC
Confidence            9999965443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.23  E-value=2e-12  Score=96.93  Aligned_cols=95  Identities=18%  Similarity=0.168  Sum_probs=76.8

Q ss_pred             ccCCCCCCCCCCCCCC-CC-CCCCCc--------cccCcccccccCchhHHHHHhhhcCCCCCc---------ccccch-
Q 043322           38 KLGGNSLSTSRDPDSP-AR-PTTAKV--------FSCNFCMRKFFSSQALGGHQNAHKRERGAA---------KRYQSQ-   97 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~-Htgekp--------f~C~~Cgk~F~~~~~L~~H~~~H~gekp~~---------f~~~s~-   97 (187)
                      .+.++.|.....|..| ++ |.+.++        |.|.+|++.|.+...|..|+++|.++++|.         |..... 
T Consensus        29 ~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L  108 (155)
T 2rpc_A           29 KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENL  108 (155)
T ss_dssp             CCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHH
T ss_pred             ccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHH
Confidence            3467799999999988 44 877665        899999999999999999999999999982         222222 


Q ss_pred             --hhHhhcCC-CC-------CCCCCCchhhHhhhccCCCCCCCCC
Q 043322           98 --RMMTMMGL-PV-------HTNMVRSLGVRAHSLVHKPSRDGAG  132 (187)
Q Consensus        98 --l~r~Htge-p~-------gk~F~~~s~L~~H~riH~p~~~~~~  132 (187)
                        |+++|+++ ||       ++.|.+...|..|+++|++.++..+
T Consensus       109 ~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A          109 KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             HHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             HHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence              37788887 65       7899999999999999987665444

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.23  E-value=4.2e-12  Score=79.38  Aligned_cols=50  Identities=14%  Similarity=0.296  Sum_probs=47.0

Q ss_pred             CCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           41 GNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        41 ~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++.|.....|..| ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            5688999999998 6899999999999999999999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.22  E-value=4e-12  Score=94.98  Aligned_cols=116  Identities=18%  Similarity=0.224  Sum_probs=67.2

Q ss_pred             CCCCCCCCCCCCCC----CCCCCCccccCcc-----cccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCC
Q 043322           41 GNSLSTSRDPDSPA----RPTTAKVFSCNFC-----MRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNM  111 (187)
Q Consensus        41 ~~sF~~~~~L~~h~----~Htgekpf~C~~C-----gk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F  111 (187)
                      ++.|.....|..|.    +|.++++|.|..|     ++.|.+...|..|+++|.+++||....          +..++.|
T Consensus        10 ~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~----------~~C~~~f   79 (155)
T 2gli_A           10 SQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF----------EGCRKSY   79 (155)
T ss_dssp             CCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCS----------TTCCCCC
T ss_pred             ccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCC----------CCCCCcc
Confidence            34455555555441    4555555554432     255555555555555555555441110          0016788


Q ss_pred             CCchhhHhhhccCCCCC---CCC-CCccCCCCCC-----C-CCCCCCCcccccc---cCCCcCCCCcc
Q 043322          112 VRSLGVRAHSLVHKPSR---DGA-GVGARFNDAD-----T-GFGMAWTPYVLEE---ATDVMWPGSFR  166 (187)
Q Consensus       112 ~~~s~L~~H~riH~p~~---~~~-~~~~~f~~~~-----~-~~~~~~~p~~~~~---~~~~~wp~s~~  166 (187)
                      .....|..|+++|.+.+   +.. .+++.|....     . .+|++++||.|+.   ++.|....+|+
T Consensus        80 ~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~  147 (155)
T 2gli_A           80 SRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR  147 (155)
T ss_dssp             SSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHH
T ss_pred             cCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHH
Confidence            88888888888886544   332 3678887663     3 6788999999975   45666555443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.22  E-value=3.9e-12  Score=98.47  Aligned_cols=103  Identities=14%  Similarity=0.082  Sum_probs=83.8

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccC--cccccccCchhHHHHH-hhh-cCCCCC---------cccccchh---hH
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCN--FCMRKFFSSQALGGHQ-NAH-KRERGA---------AKRYQSQR---MM  100 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~--~Cgk~F~~~~~L~~H~-~~H-~gekp~---------~f~~~s~l---~r  100 (187)
                      .+.++.|.....|..| ++|.++++|.|.  .|++.|.+...|..|+ +.| .++++|         .|.....|   ++
T Consensus        48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~  127 (190)
T 1tf6_A           48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF  127 (190)
T ss_dssp             TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG
T ss_pred             CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH
Confidence            3467899999999988 789999999999  8999999999999999 677 467776         23333333   88


Q ss_pred             hhcCC-CC-------CCCCCCchhhHhhhccCCCCCCCC--CCccCCCCC
Q 043322          101 TMMGL-PV-------HTNMVRSLGVRAHSLVHKPSRDGA--GVGARFNDA  140 (187)
Q Consensus       101 ~Htge-p~-------gk~F~~~s~L~~H~riH~p~~~~~--~~~~~f~~~  140 (187)
                      +|+++ ||       ++.|.+...|..|+++|++..|..  .++..|...
T Consensus       128 ~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~~~~C~~~f~~~  177 (190)
T 1tf6_A          128 SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW  177 (190)
T ss_dssp             GGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCSTTTCCCCCSCH
T ss_pred             HhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCCCCcCCCccccH
Confidence            89988 76       889999999999999999876654  157777765

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.21  E-value=2.4e-13  Score=88.22  Aligned_cols=50  Identities=14%  Similarity=0.225  Sum_probs=46.3

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      ..+++|.....|..| ++|++++||.|++||+.|.....|..|+++|+|++
T Consensus         9 ~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            9 FCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             TTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            468899999999998 78999999999999999999999999999999975

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.19  E-value=1.6e-12  Score=93.33  Aligned_cols=89  Identities=17%  Similarity=0.293  Sum_probs=74.0

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhh---hcCCCCC-------cccccch---hhHhhcC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNA---HKRERGA-------AKRYQSQ---RMMTMMG  104 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~---H~gekp~-------~f~~~s~---l~r~Htg  104 (187)
                      +.+..|.....|..| ++|.++++|.|++|++.|.+...|..|++.   |.++++|       .|.....   |+++|++
T Consensus        12 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (124)
T 2dlq_A           12 TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG   91 (124)
T ss_dssp             TTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             CCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence            467789998889888 679999999999999999999999999985   5778887       3444333   3889998


Q ss_pred             C-CC-----CCCCCCchhhHhhhc-cCCCC
Q 043322          105 L-PV-----HTNMVRSLGVRAHSL-VHKPS  127 (187)
Q Consensus       105 e-p~-----gk~F~~~s~L~~H~r-iH~p~  127 (187)
                      + ||     ++.|.+...|..|++ +|...
T Consensus        92 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           92 EMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             CCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            8 77     999999999999997 67543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=3e-11  Score=81.47  Aligned_cols=67  Identities=16%  Similarity=0.178  Sum_probs=54.0

Q ss_pred             CCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCC----CCCcccccchhhHhhcCCCCCCCCCCchhhHhhhcc
Q 043322           49 DPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRE----RGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLV  123 (187)
Q Consensus        49 ~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~ge----kp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~ri  123 (187)
                      .|..| ++|++++||.|.+|++.|.....|..|++.|.++    ++|...            ..++.|.....|..|+++
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~------------~C~~~f~~~~~L~~H~~~   69 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS------------KCGKTFTRRNTMARHADN   69 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECS------------SSCCEESCHHHHHHHHHH
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECC------------CCCChhCCHHHHHHHHHH
Confidence            45666 7899999999999999999999999999877654    443111            128899999999999999


Q ss_pred             CCCC
Q 043322          124 HKPS  127 (187)
Q Consensus       124 H~p~  127 (187)
                      |...
T Consensus        70 h~~~   73 (86)
T 1x6h_A           70 CAGP   73 (86)
T ss_dssp             CCCC
T ss_pred             ccCC
Confidence            9544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.17  E-value=9.3e-12  Score=84.69  Aligned_cols=70  Identities=21%  Similarity=0.347  Sum_probs=50.4

Q ss_pred             CCCccccC--cccccccCchhHHHHHhhhcCCCCC-------cccccch---hhHhhcCC-CC-----CCCCCCchhhHh
Q 043322           58 TAKVFSCN--FCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQ---RMMTMMGL-PV-----HTNMVRSLGVRA  119 (187)
Q Consensus        58 gekpf~C~--~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~---l~r~Htge-p~-----gk~F~~~s~L~~  119 (187)
                      |++||.|.  .|++.|.....|..|+++|.++++|       .|.....   ++++|+++ ||     ++.|.+...|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            35777786  4888888888888887777777776       2333332   26677776 66     899999999999


Q ss_pred             hhccCCCC
Q 043322          120 HSLVHKPS  127 (187)
Q Consensus       120 H~riH~p~  127 (187)
                      |+++|++.
T Consensus        81 H~~~H~~~   88 (90)
T 1a1h_A           81 HTKIHLRQ   88 (90)
T ss_dssp             HHGGGGC-
T ss_pred             HHHHhccc
Confidence            99999654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.15  E-value=3.3e-11  Score=85.10  Aligned_cols=73  Identities=16%  Similarity=0.269  Sum_probs=59.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC-CC-----CCCCCCchhh
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL-PV-----HTNMVRSLGV  117 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge-p~-----gk~F~~~s~L  117 (187)
                      ++|+++++|.|.+|++.|.....|..|+++|.  ++|       .|.....+   + +|+++ ||     ++.|.+...|
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~-~H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHE-SKCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHH-HHCSTGGGEEGGGTEECSSHHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHH-HcCCCCCccCccccchhCCHHHH
Confidence            67899999999999999999999999999994  566       34333333   5 48888 87     9999999999


Q ss_pred             Hhhhc-cCCCCCC
Q 043322          118 RAHSL-VHKPSRD  129 (187)
Q Consensus       118 ~~H~r-iH~p~~~  129 (187)
                      ..|++ +|...+.
T Consensus        86 ~~H~~~~H~~~~~   98 (107)
T 1wjp_A           86 WRHQVEVHNQNNM   98 (107)
T ss_dssp             HHHHHHTSCCCCC
T ss_pred             HHHHHHHcCCCCC
Confidence            99997 8854433

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.14  E-value=2.1e-12  Score=96.20  Aligned_cols=70  Identities=14%  Similarity=0.138  Sum_probs=60.4

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC-
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL-  105 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge-  105 (187)
                      .+.+++|.....|..| ++|++++||.|++|++.|.....|..|+++|++++||       .|.....|   +++|+++ 
T Consensus        26 ~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           26 IVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCC
Confidence            4578899999999998 7899999999999999999999999999999999999       45554444   7888876 


Q ss_pred             CC
Q 043322          106 PV  107 (187)
Q Consensus       106 p~  107 (187)
                      |+
T Consensus       106 p~  107 (133)
T 2lt7_A          106 PS  107 (133)
T ss_dssp             TT
T ss_pred             CC
Confidence            64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=2.1e-11  Score=79.73  Aligned_cols=63  Identities=16%  Similarity=0.158  Sum_probs=53.2

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCCCC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRD  129 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~~~  129 (187)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|....            .++.|.+...|..|+++|++.++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~------------C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNY------------CSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSS------------SSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCC------------CCCccCCHHHHHHHHHHHhCCCC
Confidence            5788999999999999999999999999999988862211            27889999999999999976554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.14  E-value=2.6e-11  Score=80.14  Aligned_cols=61  Identities=18%  Similarity=0.360  Sum_probs=48.8

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~  127 (187)
                      .+.++++|.|..|++.|.....|..|+++|+++++|....            .++.|.+...|..|+++|++.
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~------------C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI------------CGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTT------------TCCEESCHHHHHHHHHHHCCS
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCC------------CCchhCCHHHHHHHHHhcCCC
Confidence            4677889999999999999999999999998888762211            277888888899998888544

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=1.8e-11  Score=80.64  Aligned_cols=62  Identities=21%  Similarity=0.286  Sum_probs=53.5

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++|++++||.|.+|++.|.....|..|+++|.+++||....            .++.|.+...|..|+++|+..
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~------------C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE------------CGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSS------------SCCEESSHHHHHHHHHHHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCC------------CCcccCCHHHHHHHHHhcCCC
Confidence            67999999999999999999999999999999988872211            278899999999999999644

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.13  E-value=2.1e-11  Score=87.80  Aligned_cols=89  Identities=19%  Similarity=0.308  Sum_probs=58.8

Q ss_pred             CCCccccC--cccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC-CC-------CCCCCCchhh
Q 043322           58 TAKVFSCN--FCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL-PV-------HTNMVRSLGV  117 (187)
Q Consensus        58 gekpf~C~--~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge-p~-------gk~F~~~s~L  117 (187)
                      .+++|.|+  .|++.|.+...|..|+++| ++++|       .|.....+   +++|+++ ||       ++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            35789999  8999999999999999999 77777       22222222   4555554 33       5556666666


Q ss_pred             HhhhccCCCCCCCCCCccCCCCCCCCCCCCCCccccc--c-cCCCcCCCCcccc
Q 043322          118 RAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLE--E-ATDVMWPGSFRVN  168 (187)
Q Consensus       118 ~~H~riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~--~-~~~~~wp~s~~~~  168 (187)
                      ..|+++|                     ++++||.|.  . ++.|.....|+..
T Consensus        81 ~~H~~~h---------------------~~~~~~~C~~~~C~~~f~~~~~L~~H  113 (124)
T 1ubd_C           81 RTHVRIH---------------------TGDRPYVCPFDGCNKKFAQSTNLKSH  113 (124)
T ss_dssp             HHHHHHH---------------------HCCCCCCCCSTTCCCCCSSTTTTHHH
T ss_pred             HHHHHHh---------------------CCCCceECCCCCCCCccCCHHHHHHH
Confidence            6666665                     556777773  4 6677766666543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=2.4e-11  Score=86.80  Aligned_cols=69  Identities=12%  Similarity=0.074  Sum_probs=57.4

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHh-hh---cCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhh-hccCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQN-AH---KRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAH-SLVHKPSR  128 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~-~H---~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H-~riH~p~~  128 (187)
                      ..-+|++||.|.+|++.|.....|..|++ +|   ++++||....            .|+.|.....|..| +++|    
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~------------Cgk~F~~~~~L~~H~~r~H----   74 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE------------CNFLTKRYDALSEHNLKYH----   74 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT------------TTEEESSTHHHHTHHHHTS----
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC------------CCcccCCHHHHHHHHHHhc----
Confidence            34578999999999999999999999997 58   5577762211            28899999999999 8999    


Q ss_pred             CCCCCccCCCCCCCCCCCCCCcccccc
Q 043322          129 DGAGVGARFNDADTGFGMAWTPYVLEE  155 (187)
Q Consensus       129 ~~~~~~~~f~~~~~~~~~~~~p~~~~~  155 (187)
                                       ++++||.|+.
T Consensus        75 -----------------tgekpy~C~~   84 (102)
T 2ghf_A           75 -----------------PGEENFKLTM   84 (102)
T ss_dssp             -----------------TTCCCEEEEE
T ss_pred             -----------------CCCCCeeCCc
Confidence                             6778899987

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=2e-11  Score=86.42  Aligned_cols=70  Identities=16%  Similarity=0.262  Sum_probs=56.9

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccch---hhHhhcCC-CC-----CCCCCCchhhH
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQ---RMMTMMGL-PV-----HTNMVRSLGVR  118 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~---l~r~Htge-p~-----gk~F~~~s~L~  118 (187)
                      .|+++++|.| .|++.|.....|..|+++|.++++|       .|.....   |+++|+++ +|     ++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5788899999 8999999999999999999888887       3333333   36778777 66     89999999999


Q ss_pred             hhhccCC
Q 043322          119 AHSLVHK  125 (187)
Q Consensus       119 ~H~riH~  125 (187)
                      .|+++|.
T Consensus        83 ~H~~~~~   89 (110)
T 2csh_A           83 RHVTSCT   89 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHcc
Confidence            9999884

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.12  E-value=1.6e-11  Score=81.93  Aligned_cols=65  Identities=25%  Similarity=0.345  Sum_probs=41.6

Q ss_pred             ccccCcccccccCchhHHHHHhhhcCCCCC-------cccccch---hhHhhcCC-CC-----CCCCCCchhhHhhhccC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQ---RMMTMMGL-PV-----HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~---l~r~Htge-p~-----gk~F~~~s~L~~H~riH  124 (187)
                      ||.|.+|++.|.....|..|+++|.++++|       .|.....   ++++|+++ ||     ++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            455666666666666666666666665555       2222222   24555555 44     89999999999999998


Q ss_pred             C
Q 043322          125 K  125 (187)
Q Consensus       125 ~  125 (187)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.10  E-value=1.3e-10  Score=80.28  Aligned_cols=62  Identities=19%  Similarity=0.259  Sum_probs=52.3

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhh-ccCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHS-LVHKPS  127 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~-riH~p~  127 (187)
                      .++.+.++|.|++|++.|.....|..|+++|++++||....            .++.|.+...|..|+ ++|+.+
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~------------C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKY------------CPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTT------------SSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCC------------CCCEeCCHHHHHHhCcccCcCC
Confidence            45778899999999999999999999999999999873221            288999999999996 678543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=1e-10  Score=77.84  Aligned_cols=67  Identities=16%  Similarity=0.210  Sum_probs=54.2

Q ss_pred             CCCCC-CCCCCCCccccCcccccccCchhHHHHHh-hhcCC-CCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCC
Q 043322           49 DPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQN-AHKRE-RGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus        49 ~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~-~H~ge-kp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~  125 (187)
                      .|..| ++|++++||.|++|++.|.....|..|++ .|.++ ++|....            .++.|.+...|..|+++|.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~------------C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH------------CDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS------------SSCEESSHHHHHHHHHHTS
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC------------CCCccCCHHHHHHHHHHhC
Confidence            45666 78999999999999999999999999997 67764 6652211            2889999999999999875


Q ss_pred             CC
Q 043322          126 PS  127 (187)
Q Consensus       126 p~  127 (187)
                      +.
T Consensus        70 ~~   71 (77)
T 2ct1_A           70 SY   71 (77)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.09  E-value=1.2e-10  Score=79.88  Aligned_cols=71  Identities=18%  Similarity=0.286  Sum_probs=48.3

Q ss_pred             CCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccch---hhHhhcCC---CC-----CCCCCCchhhH
Q 043322           57 TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQ---RMMTMMGL---PV-----HTNMVRSLGVR  118 (187)
Q Consensus        57 tgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~---l~r~Htge---p~-----gk~F~~~s~L~  118 (187)
                      +++++|.|.+|++.|.....|..|+++|.++++|       .|.....   |+++|+++   +|     ++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            4566777777777777777777777777777766       2222222   25566653   44     89999999999


Q ss_pred             hhhc-cCCCC
Q 043322          119 AHSL-VHKPS  127 (187)
Q Consensus       119 ~H~r-iH~p~  127 (187)
                      .|++ +|...
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9985 88543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=6.6e-11  Score=78.69  Aligned_cols=71  Identities=20%  Similarity=0.319  Sum_probs=57.8

Q ss_pred             CCCCccccCc--ccccccCchhHHHHHh-hhcCCCCCcccccchhhHhhcCCC-CCCCCCCchhhHhhhccCCCCCCCCC
Q 043322           57 TTAKVFSCNF--CMRKFFSSQALGGHQN-AHKRERGAAKRYQSQRMMTMMGLP-VHTNMVRSLGVRAHSLVHKPSRDGAG  132 (187)
Q Consensus        57 tgekpf~C~~--Cgk~F~~~~~L~~H~~-~H~gekp~~f~~~s~l~r~Htgep-~gk~F~~~s~L~~H~riH~p~~~~~~  132 (187)
                      +++++|.|..  |++.|.....|..|++ +|.++++|....           + .++.|.+...|..|+++|        
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~-----------~~C~k~f~~~~~L~~H~~~H--------   63 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPE-----------PACGKSFNFKKHLKEHMKLH--------   63 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSC-----------TTTCCEESSHHHHHHHHHHH--------
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCC-----------CCCcCccCCHHHHHHHHHHh--------
Confidence            5788999997  9999999999999999 799988873221           1 278899999999999999        


Q ss_pred             CccCCCCCCCCCCCCCCcccccc-cCCC
Q 043322          133 VGARFNDADTGFGMAWTPYVLEE-ATDV  159 (187)
Q Consensus       133 ~~~~f~~~~~~~~~~~~p~~~~~-~~~~  159 (187)
                                   ++++||.|+. ++.|
T Consensus        64 -------------~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           64 -------------SDTRDYICEFSGPSS   78 (79)
T ss_dssp             -------------HTSCCCSCCSSSCCC
T ss_pred             -------------CCCCCeeCCCCCCCC
Confidence                         5567888887 5554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.07  E-value=1.7e-11  Score=91.43  Aligned_cols=85  Identities=18%  Similarity=0.183  Sum_probs=68.4

Q ss_pred             CCCCCCCCCCCCC-CCCCCCCccccCc--ccccccCchhHHHHHhhhcCCCCCc---------ccccch---hh-HhhcC
Q 043322           41 GNSLSTSRDPDSP-ARPTTAKVFSCNF--CMRKFFSSQALGGHQNAHKRERGAA---------KRYQSQ---RM-MTMMG  104 (187)
Q Consensus        41 ~~sF~~~~~L~~h-~~Htgekpf~C~~--Cgk~F~~~~~L~~H~~~H~gekp~~---------f~~~s~---l~-r~Htg  104 (187)
                      +..|.....|..| ++|++++||.|.+  |++.|.+...|..|+++|.++++|.         |.....   ++ ++|++
T Consensus        46 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~  125 (155)
T 2gli_A           46 LRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN  125 (155)
T ss_dssp             TCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             hhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            4789888888888 6799999999985  9999999999999999999999881         222222   24 67777


Q ss_pred             C-CC-------CCCCCCchhhHhhhccCC
Q 043322          105 L-PV-------HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       105 e-p~-------gk~F~~~s~L~~H~riH~  125 (187)
                      + ||       ++.|.+...|..|+++|.
T Consensus       126 ~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            6 55       778888888888888774

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.1e-10  Score=69.60  Aligned_cols=37  Identities=24%  Similarity=0.416  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (44)
T 2epv_A            5 SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGP   41 (44)
T ss_dssp             CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCC
T ss_pred             cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCC
Confidence            6899999999999999999999999999999999987

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.4e-10  Score=68.01  Aligned_cols=37  Identities=27%  Similarity=0.485  Sum_probs=35.6

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGP   39 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            6799999999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=68.51  Aligned_cols=37  Identities=19%  Similarity=0.319  Sum_probs=35.6

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            4 GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            6799999999999999999999999999999999987

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=69.38  Aligned_cols=38  Identities=29%  Similarity=0.521  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.04  E-value=1.4e-10  Score=68.20  Aligned_cols=37  Identities=24%  Similarity=0.478  Sum_probs=35.6

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGP   39 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCC
Confidence            6799999999999999999999999999999999997

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.5e-10  Score=69.56  Aligned_cols=37  Identities=24%  Similarity=0.415  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPS   41 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999998

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.03  E-value=1.8e-10  Score=69.16  Aligned_cols=38  Identities=26%  Similarity=0.441  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.8e-10  Score=69.10  Aligned_cols=38  Identities=26%  Similarity=0.450  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            5 SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.03  E-value=1.7e-11  Score=81.06  Aligned_cols=58  Identities=21%  Similarity=0.257  Sum_probs=51.4

Q ss_pred             CcceeeccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           32 GEWLNLKLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        32 ~~~l~l~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      +.+-+ .+.++.|.....|..| ++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus        16 ~~~~C-~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           16 KPYKC-DRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CSBCC-TTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCeEC-CCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            44444 3578899999999988 6899999999999999999999999999999999987

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.6e-10  Score=69.27  Aligned_cols=38  Identities=24%  Similarity=0.507  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG   42 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCS
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.1e-10  Score=68.90  Aligned_cols=37  Identities=27%  Similarity=0.528  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPS   41 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCS
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            6799999999999999999999999999999999998

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.5e-10  Score=69.49  Aligned_cols=38  Identities=21%  Similarity=0.406  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCC
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.03  E-value=3.3e-11  Score=84.66  Aligned_cols=71  Identities=11%  Similarity=0.076  Sum_probs=57.9

Q ss_pred             CCCCCCCCCCC-CCCCCCCccccCcccccc-cCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhh
Q 043322           43 SLSTSRDPDSP-ARPTTAKVFSCNFCMRKF-FSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAH  120 (187)
Q Consensus        43 sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F-~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H  120 (187)
                      .|.....|..| +.|.++++|.|++|++.| .....|..|+++| +++||....            .++.|.+...|..|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~------------Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHH------------CGKQLRSLAGMKYH   81 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSS------------SCCCCSSHHHHHHH
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCC------------CCCeeCCHHHHHHH
Confidence            45555555554 568889999999999999 9999999999999 999873221            28999999999999


Q ss_pred             -hccCCC
Q 043322          121 -SLVHKP  126 (187)
Q Consensus       121 -~riH~p  126 (187)
                       +++|+.
T Consensus        82 ~~~~H~~   88 (96)
T 2ctd_A           82 VMANHNS   88 (96)
T ss_dssp             HHHHTCC
T ss_pred             hHHhcCC
Confidence             999953

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.7e-10  Score=69.10  Aligned_cols=38  Identities=29%  Similarity=0.487  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSG   42 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSC
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.3e-10  Score=68.98  Aligned_cols=37  Identities=24%  Similarity=0.445  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGP   41 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCC
Confidence            6899999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.5e-10  Score=69.38  Aligned_cols=38  Identities=26%  Similarity=0.417  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG   42 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCC
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.6e-10  Score=69.35  Aligned_cols=38  Identities=29%  Similarity=0.467  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yto_A            5 SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG   42 (46)
T ss_dssp             CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTT
T ss_pred             cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=2e-10  Score=68.27  Aligned_cols=37  Identities=27%  Similarity=0.499  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP   41 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSS
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCC
Confidence            6799999999999999999999999999999999997

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.02  E-value=1.8e-10  Score=69.04  Aligned_cols=37  Identities=24%  Similarity=0.407  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPS   41 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCS
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999998

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.8e-10  Score=68.27  Aligned_cols=37  Identities=32%  Similarity=0.439  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGP   41 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSS
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCC
Confidence            6899999999999999999999999999999999997

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.3e-10  Score=68.64  Aligned_cols=38  Identities=26%  Similarity=0.480  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCS
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.8e-10  Score=69.06  Aligned_cols=38  Identities=24%  Similarity=0.405  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG   42 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSS
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.7e-10  Score=67.89  Aligned_cols=37  Identities=22%  Similarity=0.407  Sum_probs=35.5

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            6799999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.2e-10  Score=68.55  Aligned_cols=37  Identities=24%  Similarity=0.339  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHS   41 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCS
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999998

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2e-10  Score=68.90  Aligned_cols=37  Identities=27%  Similarity=0.502  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPS   41 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCS
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCC
Confidence            6899999999999999999999999999999999998

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2e-10  Score=68.84  Aligned_cols=38  Identities=26%  Similarity=0.483  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            67999999999999999999999999999999999983

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.3e-10  Score=68.64  Aligned_cols=38  Identities=26%  Similarity=0.527  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG   42 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSS
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.02  E-value=3e-10  Score=68.19  Aligned_cols=38  Identities=29%  Similarity=0.439  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=68.46  Aligned_cols=37  Identities=19%  Similarity=0.350  Sum_probs=35.6

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            6799999999999999999999999999999999987

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2e-10  Score=68.04  Aligned_cols=37  Identities=32%  Similarity=0.534  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGP   41 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCS
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.6e-10  Score=69.36  Aligned_cols=37  Identities=24%  Similarity=0.436  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSS   41 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSS
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCC
Confidence            6899999999999999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.01  E-value=2.3e-10  Score=68.60  Aligned_cols=37  Identities=27%  Similarity=0.393  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPS   41 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCS
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCc
Confidence            6899999999999999999999999999999999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.01  E-value=1.8e-10  Score=67.54  Aligned_cols=37  Identities=16%  Similarity=0.318  Sum_probs=35.6

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            6799999999999999999999999999999999997

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.8e-10  Score=67.45  Aligned_cols=37  Identities=19%  Similarity=0.406  Sum_probs=35.4

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS   39 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCS
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCc
Confidence            5799999999999999999999999999999999997

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.4e-10  Score=76.09  Aligned_cols=62  Identities=16%  Similarity=0.192  Sum_probs=50.6

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcC---CCCCcccccchhhHhhcCCCCCCCCCCchhhHhhh-ccCCCCC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKR---ERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHS-LVHKPSR  128 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~g---ekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~-riH~p~~  128 (187)
                      +|++++||.|.+|++.|.....|..|+++|.+   +++|....            .++.|.....|..|+ ++|....
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~------------C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF------------CGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT------------TCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC------------CCchhCCHHHHHHHHHHhCCCCC
Confidence            48899999999999999999999999999985   66652111            288999999999999 5564443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.2e-10  Score=68.79  Aligned_cols=38  Identities=24%  Similarity=0.512  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            67999999999999999999999999999999999983

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2e-10  Score=68.91  Aligned_cols=37  Identities=24%  Similarity=0.417  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPS   41 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCS
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCC
Confidence            6899999999999999999999999999999999998

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.1e-10  Score=68.66  Aligned_cols=38  Identities=26%  Similarity=0.502  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~   42 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSC
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcC
Confidence            68999999999999999999999999999999999983

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.01  E-value=2e-10  Score=68.99  Aligned_cols=38  Identities=32%  Similarity=0.483  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSS
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.3e-10  Score=68.54  Aligned_cols=37  Identities=27%  Similarity=0.465  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPS   41 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSC
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            6899999999999999999999999999999999998

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.4e-10  Score=68.54  Aligned_cols=38  Identities=29%  Similarity=0.386  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG   42 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            67999999999999999999999999999999999983

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.2e-10  Score=68.72  Aligned_cols=38  Identities=29%  Similarity=0.461  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSS
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.01  E-value=2.1e-10  Score=68.81  Aligned_cols=38  Identities=29%  Similarity=0.491  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG   42 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCS
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.5e-10  Score=68.51  Aligned_cols=38  Identities=32%  Similarity=0.549  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCS
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.2e-10  Score=68.70  Aligned_cols=37  Identities=27%  Similarity=0.500  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPS   41 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSC
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999998

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.4e-10  Score=68.42  Aligned_cols=38  Identities=26%  Similarity=0.447  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCS
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.3e-10  Score=68.66  Aligned_cols=38  Identities=26%  Similarity=0.528  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.9e-10  Score=68.08  Aligned_cols=37  Identities=30%  Similarity=0.441  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHS   41 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSC
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCC
Confidence            6799999999999999999999999999999999998

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.3e-10  Score=68.52  Aligned_cols=38  Identities=29%  Similarity=0.468  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG   42 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSC
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2e-10  Score=68.92  Aligned_cols=38  Identities=29%  Similarity=0.432  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCS
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.1e-10  Score=68.78  Aligned_cols=38  Identities=24%  Similarity=0.452  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG   42 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.5e-10  Score=67.77  Aligned_cols=37  Identities=27%  Similarity=0.454  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGP   41 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCT
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            6799999999999999999999999999999999997

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.2e-10  Score=68.71  Aligned_cols=38  Identities=26%  Similarity=0.429  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG   42 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.3e-10  Score=68.53  Aligned_cols=38  Identities=26%  Similarity=0.451  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.4e-10  Score=68.54  Aligned_cols=38  Identities=26%  Similarity=0.538  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            67999999999999999999999999999999999983

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2e-10  Score=68.86  Aligned_cols=38  Identities=24%  Similarity=0.447  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSG   42 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSS
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=69.04  Aligned_cols=38  Identities=32%  Similarity=0.507  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG   42 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSS
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            67999999999999999999999999999999999983

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.7e-10  Score=68.20  Aligned_cols=37  Identities=27%  Similarity=0.327  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPS   41 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCS
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            6899999999999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.8e-10  Score=68.21  Aligned_cols=37  Identities=22%  Similarity=0.433  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPS   41 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSS
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCC
Confidence            6899999999999999999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.4e-10  Score=68.59  Aligned_cols=38  Identities=29%  Similarity=0.479  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG   42 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.7e-10  Score=68.18  Aligned_cols=38  Identities=24%  Similarity=0.466  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG   42 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.8e-10  Score=68.22  Aligned_cols=38  Identities=24%  Similarity=0.378  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG   42 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.6e-10  Score=68.28  Aligned_cols=38  Identities=26%  Similarity=0.412  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSG   42 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSC
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.7e-10  Score=68.32  Aligned_cols=37  Identities=24%  Similarity=0.442  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPS   41 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCS
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCC
Confidence            6899999999999999999999999999999999998

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.2e-10  Score=68.55  Aligned_cols=38  Identities=26%  Similarity=0.501  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   42 (46)
T 2eor_A            5 SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG   42 (46)
T ss_dssp             SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSS
T ss_pred             cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.7e-10  Score=68.17  Aligned_cols=37  Identities=30%  Similarity=0.459  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPS   41 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTT
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.7e-10  Score=68.28  Aligned_cols=37  Identities=30%  Similarity=0.476  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPS   41 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCC
Confidence            6899999999999999999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.3e-10  Score=67.93  Aligned_cols=37  Identities=30%  Similarity=0.503  Sum_probs=35.6

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPS   39 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6799999999999999999999999999999999998

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.2e-10  Score=68.00  Aligned_cols=37  Identities=32%  Similarity=0.555  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGP   41 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999997

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.5e-10  Score=67.88  Aligned_cols=37  Identities=22%  Similarity=0.399  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTS   41 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCC
Confidence            6899999999999999999999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.1e-10  Score=67.90  Aligned_cols=37  Identities=30%  Similarity=0.517  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPS   41 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCC
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            6799999999999999999999999999999999998

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.3e-10  Score=68.59  Aligned_cols=38  Identities=29%  Similarity=0.366  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.1e-10  Score=68.20  Aligned_cols=38  Identities=29%  Similarity=0.489  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG   42 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCT
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCC
Confidence            68999999999999999999999999999999999983

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.98  E-value=3.4e-10  Score=67.73  Aligned_cols=37  Identities=27%  Similarity=0.434  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPS   41 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.8e-10  Score=68.20  Aligned_cols=38  Identities=26%  Similarity=0.441  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytg_A            5 SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            67999999999999999999999999999999999983

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.1e-10  Score=68.03  Aligned_cols=37  Identities=27%  Similarity=0.532  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPS   41 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCS
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            6899999999999999999999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.7e-10  Score=67.77  Aligned_cols=37  Identities=24%  Similarity=0.369  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPS   41 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSS
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.9e-10  Score=68.17  Aligned_cols=38  Identities=26%  Similarity=0.515  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSS
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCC
Confidence            67999999999999999999999999999999999983

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.9e-10  Score=67.49  Aligned_cols=37  Identities=27%  Similarity=0.495  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPS   41 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCC
Confidence            6899999999999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.4e-10  Score=67.84  Aligned_cols=38  Identities=24%  Similarity=0.439  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSG   42 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSS
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.1e-10  Score=67.93  Aligned_cols=38  Identities=26%  Similarity=0.467  Sum_probs=36.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq3_A            5 SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG   42 (46)
T ss_dssp             CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCC
T ss_pred             cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.4e-10  Score=67.82  Aligned_cols=38  Identities=26%  Similarity=0.431  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG   42 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCS
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999999999999983

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.5e-10  Score=67.85  Aligned_cols=38  Identities=24%  Similarity=0.433  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG   42 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            67999999999999999999999999999999999983

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.7e-10  Score=64.95  Aligned_cols=36  Identities=17%  Similarity=0.469  Sum_probs=34.0

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERG   89 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp   89 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.97  E-value=3.7e-10  Score=67.78  Aligned_cols=37  Identities=24%  Similarity=0.442  Sum_probs=35.9

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPS   41 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            7899999999999999999999999999999999998

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5e-10  Score=67.16  Aligned_cols=38  Identities=26%  Similarity=0.531  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG   42 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            67999999999999999999999999999999999983

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.8e-10  Score=67.63  Aligned_cols=37  Identities=24%  Similarity=0.512  Sum_probs=35.8

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPS   41 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.6e-10  Score=67.81  Aligned_cols=37  Identities=27%  Similarity=0.454  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCS
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCC
Confidence            6799999999999999999999999999999999998

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.8e-10  Score=68.32  Aligned_cols=38  Identities=29%  Similarity=0.555  Sum_probs=36.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG   42 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCC
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            67999999999999999999999999999999999983

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.96  E-value=6.8e-11  Score=78.68  Aligned_cols=58  Identities=24%  Similarity=0.368  Sum_probs=51.1

Q ss_pred             CcceeeccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           32 GEWLNLKLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        32 ~~~l~l~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ..+.+ .+.++.|.....|..| ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus        17 ~~~~C-~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           17 RRYKC-DECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             CSSBC-SSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             CCEEC-CCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            33443 3567899999999988 7899999999999999999999999999999999997

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.96  E-value=1.7e-10  Score=71.99  Aligned_cols=56  Identities=20%  Similarity=0.284  Sum_probs=44.1

Q ss_pred             CCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCC
Q 043322           58 TAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus        58 gekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~  125 (187)
                      |++||.|.+|++.|.....|..|+++|++++||....            .++.|.....|..|+++|.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~------------C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEF------------CEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSS------------SSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCC------------CcchhCCHHHHHHHHHHhc
Confidence            4789999999999999999999999999988862211            2788899999999998874

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.96  E-value=3e-10  Score=65.80  Aligned_cols=36  Identities=44%  Similarity=0.921  Sum_probs=33.4

Q ss_pred             CCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           56 PTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        56 Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      |++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            678999999999999999999999999999999983

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=4.4e-10  Score=67.53  Aligned_cols=39  Identities=15%  Similarity=0.307  Sum_probs=36.5

Q ss_pred             CCCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           53 PARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        53 h~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      .++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCC
Confidence            367999999999999999999999999999999999983

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.96  E-value=3.8e-10  Score=63.33  Aligned_cols=35  Identities=23%  Similarity=0.458  Sum_probs=33.0

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcCCCC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERG   89 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp   89 (187)
                      +|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999876

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.95  E-value=5.4e-10  Score=77.24  Aligned_cols=66  Identities=20%  Similarity=0.376  Sum_probs=38.5

Q ss_pred             CccccCc--ccccccCchhHHHHHhhhcCCCCCcc---------cccch---hhHhhcCC-CC-----CCCCCCchhhHh
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQNAHKRERGAAK---------RYQSQ---RMMTMMGL-PV-----HTNMVRSLGVRA  119 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~~~H~gekp~~f---------~~~s~---l~r~Htge-p~-----gk~F~~~s~L~~  119 (187)
                      ++|.|..  |++.|.....|..|+++|.++++|..         .....   ++++|+++ ||     ++.|.....|..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            4455554  55555555555555555555554411         11111   14445554 44     899999999999


Q ss_pred             hhccCC
Q 043322          120 HSLVHK  125 (187)
Q Consensus       120 H~riH~  125 (187)
                      |+++|+
T Consensus        94 H~~~H~   99 (100)
T 2ebt_A           94 HMKRHQ   99 (100)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            999985

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.95  E-value=4.6e-10  Score=66.54  Aligned_cols=38  Identities=18%  Similarity=0.362  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCcc
Confidence            57899999999999999999999999999999999983

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=4.6e-10  Score=66.72  Aligned_cols=37  Identities=27%  Similarity=0.363  Sum_probs=35.5

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGP   41 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCC
Confidence            6799999999999999999999999999999999997

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.95  E-value=1.3e-10  Score=74.79  Aligned_cols=60  Identities=13%  Similarity=0.263  Sum_probs=50.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhh-h-cCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNA-H-KRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~-H-~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~  125 (187)
                      ++|++++||.|+.|++.|.....|..|++. | .+++||....            .++.|.+...|..|+++|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~------------C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF------------CFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT------------TCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC------------CCCccCCHHHHHHHHHHHc
Confidence            578999999999999999999999999988 7 5777762211            2788999999999998774

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.9e-10  Score=67.77  Aligned_cols=37  Identities=24%  Similarity=0.386  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPS   41 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            6799999999999999999999999999999999998

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=4.7e-10  Score=67.28  Aligned_cols=38  Identities=29%  Similarity=0.542  Sum_probs=36.0

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcC-CCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKR-ERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~g-ekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++ ++||.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~   43 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGP   43 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSS
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCC
Confidence            679999999999999999999999999999999 99983

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4e-10  Score=67.52  Aligned_cols=37  Identities=30%  Similarity=0.456  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPS   41 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSS
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCC
Confidence            6799999999999999999999999999999999998

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.94  E-value=4.5e-10  Score=63.19  Aligned_cols=35  Identities=17%  Similarity=0.438  Sum_probs=33.0

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcCCCC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERG   89 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp   89 (187)
                      +|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            48899999999999999999999999999999875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.94  E-value=5.2e-10  Score=73.34  Aligned_cols=60  Identities=23%  Similarity=0.325  Sum_probs=51.8

Q ss_pred             CCCCCCCccccC--cccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCC
Q 043322           54 ARPTTAKVFSCN--FCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus        54 ~~Htgekpf~C~--~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~  125 (187)
                      .+|+++++|.|+  .|++.|.....|..|+++|.++++|....            .++.|.+...|..|+++|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~------------C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI------------CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT------------TCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC------------CCchhCCHHHHHHHHHhcC
Confidence            568999999997  59999999999999999999988863221            2889999999999999984

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6e-10  Score=66.83  Aligned_cols=37  Identities=24%  Similarity=0.389  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHh-hhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQN-AHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~-~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|++ +|++++||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~   42 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPS   42 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSS
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCC
Confidence            68999999999999999999999999999 99999998

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.7e-10  Score=67.45  Aligned_cols=38  Identities=29%  Similarity=0.491  Sum_probs=35.9

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP   42 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCC
Confidence            67999999999999999999999999999999999983

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=79.89  Aligned_cols=70  Identities=17%  Similarity=0.253  Sum_probs=59.2

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC-
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL-  105 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge-  105 (187)
                      .+.+..|.....|..| ++|+++++|.|.+|++.|.....|..|+++|.++++|       .|.....|   +++|+++ 
T Consensus        21 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  100 (106)
T 2ee8_A           21 KFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS  100 (106)
T ss_dssp             SSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCC
T ss_pred             CCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCC
Confidence            3467889998889888 6899999999999999999999999999999999998       34444433   8899887 


Q ss_pred             CC
Q 043322          106 PV  107 (187)
Q Consensus       106 p~  107 (187)
                      ||
T Consensus       101 ~~  102 (106)
T 2ee8_A          101 SP  102 (106)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.93  E-value=4.3e-10  Score=76.10  Aligned_cols=72  Identities=24%  Similarity=0.279  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCC-CCCCCCCccccC--cccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhh
Q 043322           41 GNSLSTSRDPDSP-ARPTTAKVFSCN--FCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGV  117 (187)
Q Consensus        41 ~~sF~~~~~L~~h-~~Htgekpf~C~--~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L  117 (187)
                      ++.|.....|..| ++|.++++|.|.  .|++.|.....|..|+++|+++++|....            .++.|.....|
T Consensus        14 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~------------C~~~f~~~~~l   81 (89)
T 2wbs_A           14 GKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK------------CDRAFSRSDHL   81 (89)
T ss_dssp             CCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS------------SSCEESSHHHH
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC------------CCcccCCHHHH
Confidence            4445555555544 445555555554  35555555555555555555554431110            18899999999


Q ss_pred             HhhhccC
Q 043322          118 RAHSLVH  124 (187)
Q Consensus       118 ~~H~riH  124 (187)
                      ..|+++|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            9999998

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.90  E-value=8.6e-10  Score=68.75  Aligned_cols=55  Identities=16%  Similarity=0.188  Sum_probs=41.4

Q ss_pred             ccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~  127 (187)
                      ||.|..|++.|.....|..|+++|++++||....            .++.|.+...|..|+++|.+.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~------------C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTY------------CNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSS------------SSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCC------------CCchhcCHHHHHHHHHHhccc
Confidence            5788888888888888888888888877752111            267788888888888888654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=2.8e-10  Score=74.08  Aligned_cols=60  Identities=8%  Similarity=0.089  Sum_probs=47.2

Q ss_pred             CCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccC
Q 043322           46 TSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVH  124 (187)
Q Consensus        46 ~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH  124 (187)
                      ....|..| ++|++++||.|.+|++.|.....|..       +++|....            .++.|.+...|..|+++|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~------------C~~~f~~~~~l~~H~~~H   62 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEK------------CRKDSCQEAALNKDEGNE   62 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHH------------HHHTCSCCCSSCCCSSCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCC------------CChhhcCHHHHHHHHHhh
Confidence            35677777 78999999999999999999888775       44441110            177899999999999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.4e-10  Score=66.39  Aligned_cols=37  Identities=22%  Similarity=0.334  Sum_probs=35.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLS   41 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCC
Confidence            6799999999999999999999999999999999998

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.2e-10  Score=66.75  Aligned_cols=39  Identities=26%  Similarity=0.404  Sum_probs=36.4

Q ss_pred             CCCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           53 PARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        53 h~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      .++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSG   42 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCS
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            367999999999999999999999999999999999983

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=9.5e-10  Score=65.82  Aligned_cols=38  Identities=26%  Similarity=0.482  Sum_probs=36.1

Q ss_pred             CCCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           53 PARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        53 h~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      .++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCC
Confidence            36899999999999999999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.2e-09  Score=65.16  Aligned_cols=37  Identities=22%  Similarity=0.431  Sum_probs=35.2

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      .+|++++||.|.+|++.|.....|..|+++|+++++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~   39 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK   39 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCC
Confidence            4689999999999999999999999999999999998

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.86  E-value=1.7e-09  Score=61.48  Aligned_cols=34  Identities=32%  Similarity=0.413  Sum_probs=32.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      ++|++++||.|+.|++.|.....|..|+++|+++
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            6799999999999999999999999999999874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.86  E-value=7.5e-11  Score=85.81  Aligned_cols=71  Identities=17%  Similarity=0.145  Sum_probs=57.4

Q ss_pred             CCCCCCCCCCCCCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhc
Q 043322           43 SLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSL  122 (187)
Q Consensus        43 sF~~~~~L~~h~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~r  122 (187)
                      .|.....|..|..|++++||.|++|++.|.....|..|+++|  ++||....            .++.|.+...|..|++
T Consensus        56 ~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~------------C~k~f~~~~~l~~H~~  121 (129)
T 2wbt_A           56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV------------CKKEFTSTDSALDHVC  121 (129)
T ss_dssp             GTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTT------------TCCBCSSHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCC------------CCcccCCHHHHHHHHH
Confidence            344555566677789999999999999999999999999998  77762211            2899999999999999


Q ss_pred             cCCCC
Q 043322          123 VHKPS  127 (187)
Q Consensus       123 iH~p~  127 (187)
                      +|++.
T Consensus       122 ~h~~~  126 (129)
T 2wbt_A          122 KKHNI  126 (129)
T ss_dssp             HTTCC
T ss_pred             HHCCc
Confidence            99754

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.4e-09  Score=61.91  Aligned_cols=35  Identities=20%  Similarity=0.454  Sum_probs=32.6

Q ss_pred             CCCCCCCccccCcccccccCc-hhHHHHHhhhcCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSS-QALGGHQNAHKRER   88 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~-~~L~~H~~~H~gek   88 (187)
                      ++|++++||.|++|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            478999999999999999999 99999999999875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.84  E-value=2.2e-09  Score=67.66  Aligned_cols=56  Identities=21%  Similarity=0.386  Sum_probs=45.1

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhh-ccCCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHS-LVHKPS  127 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~-riH~p~  127 (187)
                      +||.|..|++.|.....|..|+++|++++||....            .++.|.+...|..|+ ++|.+.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~------------C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL------------CNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTT------------TCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCC------------CCCccCCHHHHHHHHHHHcCCc
Confidence            58999999999999999999999999888762211            278889999999996 688543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.83  E-value=2.9e-10  Score=78.19  Aligned_cols=68  Identities=25%  Similarity=0.300  Sum_probs=57.4

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL  105 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge  105 (187)
                      .+.+..|.....|..| ++|.++++|.|.+|++.|.....|..|+++|.++++|       .|.....+   +++|+++
T Consensus        12 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   90 (96)
T 2dmd_A           12 EVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGD   90 (96)
T ss_dssp             TTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence            3567789998889888 6899999999999999999999999999999999998       34444333   7788876

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.2e-09  Score=60.78  Aligned_cols=35  Identities=29%  Similarity=0.511  Sum_probs=32.5

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +.|++++||.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            46899999999999999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.3e-09  Score=60.45  Aligned_cols=35  Identities=20%  Similarity=0.333  Sum_probs=32.4

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      .+|++++||.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            36889999999999999999999999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.1e-09  Score=60.85  Aligned_cols=35  Identities=20%  Similarity=0.433  Sum_probs=32.3

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +.|++++||.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            35889999999999999999999999999999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.81  E-value=1.1e-08  Score=70.11  Aligned_cols=62  Identities=15%  Similarity=0.015  Sum_probs=44.7

Q ss_pred             CCccccCcccccccCchhHHHHHhh-hcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNA-HKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVH  124 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~-H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH  124 (187)
                      ...|.|..|++.|.....|..|+++ |.++++.......    .+.-...++.|.....|..|+++|
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~----~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY----WEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCC----CTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCcccee----ccCCCCCCcccCCHHHHHHHHHhc
Confidence            3457899999999999999999998 8887763100000    000001289999999999999999

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=1.9e-09  Score=61.73  Aligned_cols=35  Identities=23%  Similarity=0.376  Sum_probs=33.0

Q ss_pred             CCCCCccccC--cccccccCchhHHHHHhhhcCCCCC
Q 043322           56 PTTAKVFSCN--FCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        56 Htgekpf~C~--~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      |++++||.|.  .|++.|.....|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6789999999  5999999999999999999999987

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.4e-09  Score=59.73  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=32.0

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +|++++||.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5889999999999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.80  E-value=2.5e-09  Score=59.84  Aligned_cols=31  Identities=26%  Similarity=0.466  Sum_probs=29.8

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      +||.|++|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5899999999999999999999999999987

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.79  E-value=1.3e-10  Score=77.37  Aligned_cols=66  Identities=18%  Similarity=0.335  Sum_probs=53.9

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMG  104 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htg  104 (187)
                      +.+..|.....|..| ++|.++++|.|..|++.|.....|..|+++|.++++|       .|.....+   +++|+|
T Consensus         6 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A            6 ICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             SSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            456788888888888 6799999999999999999999999999999999998       34444333   777764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=2.2e-09  Score=74.31  Aligned_cols=56  Identities=18%  Similarity=0.251  Sum_probs=44.9

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~  125 (187)
                      ++|++++||.|.+|++.|.....|..|+++|++++||..                +.|.....|..|+++|.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C----------------~~~~~~~~~~~~~~~~~   73 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA----------------KRQERRKQLLSKQKYAD   73 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC----------------CCCSCCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc----------------chhhhHHHHHhhhcccc
Confidence            579999999999999999999999999999998887621                22344556667777773

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.79  E-value=1.9e-10  Score=78.37  Aligned_cols=66  Identities=23%  Similarity=0.323  Sum_probs=47.8

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCCCC-----CCCCCCchhhHhhhcc
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGLPV-----HTNMVRSLGVRAHSLV  123 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htgep~-----gk~F~~~s~L~~H~ri  123 (187)
                      ++||.|.+|++.|.....|..|+++|.+++||       .|.....+   +++|++.+|     ++.|.....|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHH
Confidence            47888888888888888888888888888887       23333332   555554444     7778888888888765


Q ss_pred             C
Q 043322          124 H  124 (187)
Q Consensus       124 H  124 (187)
                      +
T Consensus        81 ~   81 (88)
T 1llm_C           81 L   81 (88)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.79  E-value=2.8e-10  Score=74.27  Aligned_cols=53  Identities=17%  Similarity=0.196  Sum_probs=48.5

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      .+.++.|.....|..| ++|+++++|.|.+|++.|.....|..|+++|++++|.
T Consensus        13 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           13 SECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            3577899999999988 7899999999999999999999999999999998874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.79  E-value=2.8e-10  Score=78.55  Aligned_cols=51  Identities=27%  Similarity=0.541  Sum_probs=46.2

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHH-hhhcCCC
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQ-NAHKRER   88 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~-~~H~gek   88 (187)
                      .+.++.|.....|..| ++|++++||.|++|++.|.....|..|+ ++|++|.
T Consensus        32 ~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           32 PVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4678899999999999 7899999999999999999999999996 6798764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.78  E-value=1.6e-10  Score=78.49  Aligned_cols=67  Identities=24%  Similarity=0.281  Sum_probs=55.5

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hHhhcCC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MMTMMGL  105 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r~Htge  105 (187)
                      ..+..|.....|..| ++|.++++|.|..|++.|.+...|..|+++|.++++|       .|.....+   +++|+++
T Consensus        11 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           11 SCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ   88 (90)
T ss_dssp             SCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC-
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhccc
Confidence            367789888888888 6799999999999999999999999999999999998       34444333   7788764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.78  E-value=3.1e-10  Score=70.83  Aligned_cols=50  Identities=14%  Similarity=0.263  Sum_probs=45.6

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +.+..|.....|..| ++|++++||.|++|++.|.....|..|+++|.+++
T Consensus         6 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            6 ECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             TTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            467789988889888 68999999999999999999999999999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=3.7e-09  Score=70.39  Aligned_cols=37  Identities=27%  Similarity=0.396  Sum_probs=33.9

Q ss_pred             CCCCCCCccccCc--ccccccCchhHHHHH-hhhcCCCCC
Q 043322           54 ARPTTAKVFSCNF--CMRKFFSSQALGGHQ-NAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~--Cgk~F~~~~~L~~H~-~~H~gekp~   90 (187)
                      ..++++|||.|.+  |+|+|..++.|..|+ ++|+++|||
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~   59 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA   59 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCc
Confidence            4578999999976  999999999999997 689999998

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.6e-09  Score=69.07  Aligned_cols=60  Identities=13%  Similarity=0.189  Sum_probs=49.6

Q ss_pred             CCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCCC
Q 043322           56 PTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSR  128 (187)
Q Consensus        56 Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~~  128 (187)
                      ..+++||.|.+|++.|. ...|..|+++ ++++||....           ..|+.|.....|..|+++|-|.+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~-----------~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPN-----------QCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTT-----------CCSCCEEETTTHHHHHHTTSSSC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCc-----------ccCcccccHHHHHHHHHhhcccC
Confidence            45789999999999999 9999999998 8888873220           12788999999999999997654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=4.8e-09  Score=61.55  Aligned_cols=33  Identities=15%  Similarity=0.231  Sum_probs=30.7

Q ss_pred             CCCCCCccccCc--ccccccCchhHHHHHhhhcCC
Q 043322           55 RPTTAKVFSCNF--CMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        55 ~Htgekpf~C~~--Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      .+++++||.|++  |++.|.....|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            478899999986  999999999999999999986

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=5.7e-09  Score=58.96  Aligned_cols=34  Identities=26%  Similarity=0.664  Sum_probs=31.6

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      .|++++||.|++|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4788999999999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4.7e-09  Score=60.01  Aligned_cols=34  Identities=15%  Similarity=0.371  Sum_probs=31.7

Q ss_pred             CCCCCCCccccCcccccccCchhHHHH-HhhhcCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGH-QNAHKRE   87 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H-~~~H~ge   87 (187)
                      ++|++++||.|+.|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            578999999999999999999999999 9999875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6e-09  Score=62.61  Aligned_cols=37  Identities=27%  Similarity=0.460  Sum_probs=35.5

Q ss_pred             CCCCCCCccccC--cccccccCchhHHHHHhhhcCCCCC
Q 043322           54 ARPTTAKVFSCN--FCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~--~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ++|++++||.|.  .|++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   43 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPS   43 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            689999999998  8999999999999999999999998

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.71  E-value=1.6e-08  Score=65.96  Aligned_cols=61  Identities=20%  Similarity=0.371  Sum_probs=51.2

Q ss_pred             CCCCCCCccccCc--ccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccC
Q 043322           54 ARPTTAKVFSCNF--CMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVH  124 (187)
Q Consensus        54 ~~Htgekpf~C~~--Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH  124 (187)
                      ..+...++|.|..  |++.|.....|..|+++|++++||....          +..++.|.....|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~----------~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSW----------KGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCC----------TTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCC----------CCCCcccCCHHHHHhHhhcC
Confidence            4567789999998  9999999999999999999999873321          01378899999999999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.70  E-value=2.3e-09  Score=74.02  Aligned_cols=77  Identities=14%  Similarity=0.076  Sum_probs=59.9

Q ss_pred             CCCCCcceeec-cCCCCCCCCCCCCCC-CCCCCCCccccC--cccccccCchhHHHHHhhhcCCCCC-------cccccc
Q 043322           28 DDNPGEWLNLK-LGGNSLSTSRDPDSP-ARPTTAKVFSCN--FCMRKFFSSQALGGHQNAHKRERGA-------AKRYQS   96 (187)
Q Consensus        28 ~~~~~~~l~l~-~~~~sF~~~~~L~~h-~~Htgekpf~C~--~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s   96 (187)
                      ......+.+.- ..++.|.....|..| ++|.++++|.|.  .|++.|.....|..|+++|+++++|       .|....
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence            33445555442 367899999999988 689999999996  6999999999999999999999999       344443


Q ss_pred             hh---hHhhcC
Q 043322           97 QR---MMTMMG  104 (187)
Q Consensus        97 ~l---~r~Htg  104 (187)
                      .+   +++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            33   677753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.70  E-value=5.2e-09  Score=63.72  Aligned_cols=35  Identities=20%  Similarity=0.463  Sum_probs=30.2

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHh-hhcCCCC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQN-AHKRERG   89 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~-~H~gekp   89 (187)
                      +|++++||.|.+|++.|.....|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5899999999999999999999999999 9998754

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.70  E-value=7e-09  Score=69.17  Aligned_cols=70  Identities=13%  Similarity=0.104  Sum_probs=38.4

Q ss_pred             CCCCCCCCCCCCC-CCCCCCCccccCc--ccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCC-C--CCCCCCCc
Q 043322           41 GNSLSTSRDPDSP-ARPTTAKVFSCNF--CMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGL-P--VHTNMVRS  114 (187)
Q Consensus        41 ~~sF~~~~~L~~h-~~Htgekpf~C~~--Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htge-p--~gk~F~~~  114 (187)
                      ++.|.....|..| ++|++++||.|++  |++.|.....|..|+++|++   |.            -. +  .++.|...
T Consensus        10 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~------------C~~~~~C~~~f~~~   74 (85)
T 2j7j_A           10 GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YP------------CKKDDSCSFVGKTW   74 (85)
T ss_dssp             CCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EE------------CCSCSSCCCEESSH
T ss_pred             CcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CC------------CCCCCCCCCccCCH
Confidence            3444444444444 3444555555544  55555555555555554443   10            02 2  27888888


Q ss_pred             hhhHhhhccCC
Q 043322          115 LGVRAHSLVHK  125 (187)
Q Consensus       115 s~L~~H~riH~  125 (187)
                      ..|..|+++|+
T Consensus        75 ~~l~~H~~~hh   85 (85)
T 2j7j_A           75 TLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhcC
Confidence            88999988773

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.70  E-value=5.6e-10  Score=79.60  Aligned_cols=53  Identities=15%  Similarity=0.019  Sum_probs=48.0

Q ss_pred             ccCCCCCCCCCCCCCC-C-CC---CCCCccccCcccccccCchhHHHH-HhhhcCCCCC
Q 043322           38 KLGGNSLSTSRDPDSP-A-RP---TTAKVFSCNFCMRKFFSSQALGGH-QNAHKRERGA   90 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~-~H---tgekpf~C~~Cgk~F~~~~~L~~H-~~~H~gekp~   90 (187)
                      ...++.|.....|..| + +|   ++++||.|++||+.|.....|..| +++|++++||
T Consensus        22 ~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy   80 (102)
T 2ghf_A           22 KYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENF   80 (102)
T ss_dssp             SSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCE
T ss_pred             CCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCe
Confidence            4578899999999988 4 48   678999999999999999999999 8999999999

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=8.9e-09  Score=62.26  Aligned_cols=38  Identities=24%  Similarity=0.391  Sum_probs=35.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ..|.++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   42 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCcc
Confidence            35788999999999999999999999999999999983

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.67  E-value=5e-09  Score=63.37  Aligned_cols=39  Identities=23%  Similarity=0.416  Sum_probs=34.7

Q ss_pred             CCCCCCCCCCCccccC--cccccccCchhHHHHHhhhcCCC
Q 043322           50 PDSPARPTTAKVFSCN--FCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        50 L~~h~~Htgekpf~C~--~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +..+.+|++++||.|.  .|++.|.....|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4455779999999996  79999999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=4.5e-10  Score=78.48  Aligned_cols=52  Identities=15%  Similarity=0.179  Sum_probs=48.1

Q ss_pred             cCCCCCC-CCCCCCCC-CCCCC-CCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           39 LGGNSLS-TSRDPDSP-ARPTT-AKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        39 ~~~~sF~-~~~~L~~h-~~Htg-ekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      +.++.|. ....|..| ++|++ +++|.|.+|++.|.....|..|+++|++++|+
T Consensus        29 ~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           29 TCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             TTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            5778999 99999988 67888 99999999999999999999999999999986

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.67  E-value=1.4e-09  Score=60.32  Aligned_cols=31  Identities=26%  Similarity=0.436  Sum_probs=29.6

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      +||.|++|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.66  E-value=1.6e-09  Score=74.37  Aligned_cols=53  Identities=15%  Similarity=0.111  Sum_probs=47.9

Q ss_pred             cCCCCCCCCCCCCCC-CC-CCCCCc--------cccCcccccccCchhHHHHHhhhcCCCCCc
Q 043322           39 LGGNSLSTSRDPDSP-AR-PTTAKV--------FSCNFCMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~-Htgekp--------f~C~~Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      ..++.|.....|..| ++ |+++++        |.|.+|++.|.....|..|+++|++++||.
T Consensus        30 ~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           30 SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             CCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             ccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            467799999999988 55 999888        999999999999999999999999999983

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.65  E-value=1.2e-08  Score=58.32  Aligned_cols=34  Identities=26%  Similarity=0.465  Sum_probs=31.3

Q ss_pred             CCCCCCccccCc--ccccccCchhHHHHHhhhcCCC
Q 043322           55 RPTTAKVFSCNF--CMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        55 ~Htgekpf~C~~--Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      .|++++||.|.+  |++.|.....|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478999999995  9999999999999999999875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.64  E-value=1.1e-09  Score=71.93  Aligned_cols=52  Identities=23%  Similarity=0.233  Sum_probs=46.8

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCC
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERG   89 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp   89 (187)
                      .+.++.|.....|..| ++|++++||.|.+|++.|.....|..|+++|+++.+
T Consensus        18 ~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           18 VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             SSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            4577899999999988 789999999999999999999999999999988653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.63  E-value=5.3e-09  Score=71.58  Aligned_cols=68  Identities=13%  Similarity=0.211  Sum_probs=55.5

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCC--CCC-------cccccchh---h-Hhhc
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRE--RGA-------AKRYQSQR---M-MTMM  103 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~ge--kp~-------~f~~~s~l---~-r~Ht  103 (187)
                      .+.+..|.....|..| ++|+++++|.|.+|++.|.....|..|+++|.++  ++|       .|.....+   + ++|+
T Consensus        11 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           11 EICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS   90 (95)
T ss_dssp             SSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred             CCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcC
Confidence            3567889999999888 6799999999999999999999999999999987  888       34444443   4 3676


Q ss_pred             CC
Q 043322          104 GL  105 (187)
Q Consensus       104 ge  105 (187)
                      ++
T Consensus        91 ~~   92 (95)
T 2yt9_A           91 GP   92 (95)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.62  E-value=2.7e-09  Score=75.22  Aligned_cols=60  Identities=18%  Similarity=0.292  Sum_probs=53.3

Q ss_pred             CCCCcceeeccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           29 DNPGEWLNLKLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        29 ~~~~~~l~l~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      .....+.+  ..++.|.....|..| ++|.++++|.|.+|++.|.....|..|+++|.++++|
T Consensus         6 ~~~k~~~C--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   66 (110)
T 2csh_A            6 SGDKLYPC--QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY   66 (110)
T ss_dssp             CCCCCEEC--TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCE
T ss_pred             CCCCCEec--cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCe
Confidence            34456777  478899999999988 6799999999999999999999999999999999998

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.61  E-value=1.6e-09  Score=71.90  Aligned_cols=52  Identities=23%  Similarity=0.291  Sum_probs=48.0

Q ss_pred             cCCCCCCCCCCCCCC-C-CCCCCCccccCc--ccccccCchhHHHHHhhhcCCCCC
Q 043322           39 LGGNSLSTSRDPDSP-A-RPTTAKVFSCNF--CMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~-~Htgekpf~C~~--Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ..++.|.....|..| + +|+++++|.|.+  |++.|.....|..|+++|++++||
T Consensus        14 ~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~   69 (79)
T 2dlk_A           14 GCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY   69 (79)
T ss_dssp             TTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             CCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCe
Confidence            367889999999988 4 799999999999  999999999999999999999998

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.61  E-value=2.2e-09  Score=75.23  Aligned_cols=50  Identities=14%  Similarity=0.171  Sum_probs=44.4

Q ss_pred             ccCCCCC-CCCCCCCCC-CCCCCCCccccCcccccccCchhHHHH-HhhhcCCC
Q 043322           38 KLGGNSL-STSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGH-QNAHKRER   88 (187)
Q Consensus        38 ~~~~~sF-~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H-~~~H~gek   88 (187)
                      ...++.| .....|..| ++| +++||.|.+|+|.|.....|..| +++|+++.
T Consensus        38 ~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           38 PTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             TTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            3467899 899999988 679 99999999999999999999999 89998643

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.59  E-value=2.9e-09  Score=67.05  Aligned_cols=50  Identities=18%  Similarity=0.325  Sum_probs=44.4

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHH-hhhcCCC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQ-NAHKRER   88 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~-~~H~gek   88 (187)
                      ..++.|.....|..| ++|++++||.|++|++.|.....|..|+ ++|.++.
T Consensus         7 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            7 VCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             TTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            467789999999988 6899999999999999999999999996 7888753

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.58  E-value=1.4e-09  Score=67.70  Aligned_cols=48  Identities=19%  Similarity=0.292  Sum_probs=43.0

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      +.++.|.....|..| ++|++++||.|++|++.|.....|..|+++|.+
T Consensus         9 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            9 YCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             TTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467789999999888 689999999999999999999999999998863

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=8.8e-08  Score=67.81  Aligned_cols=50  Identities=22%  Similarity=0.258  Sum_probs=41.9

Q ss_pred             cCCCCC--CCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           39 LGGNSL--STSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        39 ~~~~sF--~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +.+..|  .....|..| ++|++++||.|.+|++.|.....|..|+++|....
T Consensus        55 ~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           55 NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            456666  888889888 67999999999999999999999999998876543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.56  E-value=4.7e-09  Score=70.87  Aligned_cols=58  Identities=19%  Similarity=0.329  Sum_probs=40.7

Q ss_pred             CCccccCc--ccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCC
Q 043322           59 AKVFSCNF--CMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus        59 ekpf~C~~--Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p  126 (187)
                      .++|.|..  |++.|.....|..|+++|.++++|.....          ..++.|.....|..|+++|.+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~----------~C~~~f~~~~~l~~H~~~h~~   62 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWD----------GCGWKFARSDELTRHYRKHTG   62 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCST----------TTCCEESSHHHHHHHHHHHHC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCC----------CCCCccCCHHHHHHHHHHcCC
Confidence            45788888  88888888888888888888887633210          125666667777777777643

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.55  E-value=3.2e-09  Score=74.70  Aligned_cols=66  Identities=15%  Similarity=0.146  Sum_probs=51.4

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC-------cccccchh---hH-hhcCC-
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA-------AKRYQSQR---MM-TMMGL-  105 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~-------~f~~~s~l---~r-~Htge-  105 (187)
                      +.+..|.....|..| ++|  .++|.|.+|++.|.....|..|++ |++++||       .|.....|   ++ +|+++ 
T Consensus        21 ~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   97 (107)
T 1wjp_A           21 LCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNN   97 (107)
T ss_dssp             TTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCC
T ss_pred             CCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCC
Confidence            467788888888887 556  478999999999999999999995 9999998       34444333   65 78777 


Q ss_pred             CC
Q 043322          106 PV  107 (187)
Q Consensus       106 p~  107 (187)
                      ||
T Consensus        98 ~~   99 (107)
T 1wjp_A           98 MA   99 (107)
T ss_dssp             CC
T ss_pred             CC
Confidence            66

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.54  E-value=3.3e-08  Score=52.78  Aligned_cols=30  Identities=23%  Similarity=0.609  Sum_probs=27.9

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            479999999999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.53  E-value=4.1e-08  Score=52.27  Aligned_cols=29  Identities=28%  Similarity=0.529  Sum_probs=27.1

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999875

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=4.7e-08  Score=60.59  Aligned_cols=37  Identities=27%  Similarity=0.517  Sum_probs=34.4

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHh-hhcCCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQN-AHKRERGA   90 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~-~H~gekp~   90 (187)
                      ..|++++||.|.+|++.|.....|..|++ +|++++||
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~   42 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH   42 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCc
Confidence            35788999999999999999999999997 99999998

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.50  E-value=5.9e-08  Score=51.51  Aligned_cols=29  Identities=31%  Similarity=0.705  Sum_probs=27.0

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999874

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.49  E-value=7.9e-08  Score=51.23  Aligned_cols=30  Identities=20%  Similarity=0.458  Sum_probs=27.7

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRERG   89 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gekp   89 (187)
                      +||.|.+|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            589999999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.48  E-value=6.5e-08  Score=51.15  Aligned_cols=29  Identities=28%  Similarity=0.470  Sum_probs=27.1

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999999874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.48  E-value=9.8e-08  Score=52.16  Aligned_cols=30  Identities=23%  Similarity=0.582  Sum_probs=27.9

Q ss_pred             CCccccC--cccccccCchhHHHHHhhhcCCC
Q 043322           59 AKVFSCN--FCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        59 ekpf~C~--~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4799999  89999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=7.5e-08  Score=63.26  Aligned_cols=36  Identities=19%  Similarity=0.382  Sum_probs=32.6

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCCCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERG   89 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp   89 (187)
                      ..|.+++||.|.+|+|.|.....|..|+++|++++.
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            357889999999999999999999999999998754

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.46  E-value=5.2e-08  Score=51.64  Aligned_cols=29  Identities=28%  Similarity=0.503  Sum_probs=27.1

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999999875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=2.3e-08  Score=53.58  Aligned_cols=30  Identities=33%  Similarity=0.606  Sum_probs=27.6

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            478999999999999999999999998864

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.2e-08  Score=65.77  Aligned_cols=53  Identities=11%  Similarity=0.041  Sum_probs=45.5

Q ss_pred             eeeccCCCCCCCCCCCCCC-CCCCCCCccccC-cccccccCchhHHHHHhhhcCCCC
Q 043322           35 LNLKLGGNSLSTSRDPDSP-ARPTTAKVFSCN-FCMRKFFSSQALGGHQNAHKRERG   89 (187)
Q Consensus        35 l~l~~~~~sF~~~~~L~~h-~~Htgekpf~C~-~Cgk~F~~~~~L~~H~~~H~gekp   89 (187)
                      ..-...++.|. ...|..| ++ ++++||.|+ .|++.|.....|..|+++|...++
T Consensus        11 ~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           11 QPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             EECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             eeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            33345778899 8888888 56 999999999 999999999999999999987765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=2.6e-08  Score=53.21  Aligned_cols=29  Identities=28%  Similarity=0.522  Sum_probs=26.9

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998864

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.42  E-value=4e-09  Score=69.02  Aligned_cols=54  Identities=26%  Similarity=0.363  Sum_probs=46.5

Q ss_pred             Ccceee-ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhc
Q 043322           32 GEWLNL-KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        32 ~~~l~l-~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      ..|.+. ...++.|.....|..| ++|++++||.|.+|++.|.....|..|+++|+
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            345554 2578899999999988 68999999999999999999999999999885

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.42  E-value=1.1e-07  Score=51.63  Aligned_cols=29  Identities=31%  Similarity=0.764  Sum_probs=27.0

Q ss_pred             CccccC--cccccccCchhHHHHHhhhcCCC
Q 043322           60 KVFSCN--FCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        60 kpf~C~--~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +||.|+  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=9.8e-08  Score=50.44  Aligned_cols=28  Identities=21%  Similarity=0.564  Sum_probs=26.0

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      ++||.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4799999999999999999999999874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=1.4e-07  Score=50.42  Aligned_cols=29  Identities=31%  Similarity=0.599  Sum_probs=26.7

Q ss_pred             CccccCcccccccCchhHHHH-HhhhcCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGH-QNAHKRER   88 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H-~~~H~gek   88 (187)
                      +||.|..|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 78999875

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.38  E-value=1.3e-07  Score=49.72  Aligned_cols=27  Identities=30%  Similarity=0.536  Sum_probs=25.2

Q ss_pred             CCccccCcccccccCchhHHHHHhhhc
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999885

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.37  E-value=8.2e-08  Score=61.40  Aligned_cols=38  Identities=16%  Similarity=0.184  Sum_probs=33.4

Q ss_pred             CCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           50 PDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        50 L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      |..| ++|++++||.|++|++.|.....|.   ++|++++||
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~   40 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTF   40 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEE
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCE
Confidence            4556 7899999999999999999988876   789999987

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.37  E-value=1.4e-08  Score=65.00  Aligned_cols=49  Identities=16%  Similarity=0.374  Sum_probs=43.0

Q ss_pred             ccCCCCCCCCCCCCCC-CC-C-CCCCccccCcccccccCchhHHHHHhhhcC
Q 043322           38 KLGGNSLSTSRDPDSP-AR-P-TTAKVFSCNFCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~-H-tgekpf~C~~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      ...++.|.....|..| ++ | ++++||.|+.|++.|.....|..|+++|.+
T Consensus        14 ~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           14 KVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3467889999999988 45 7 689999999999999999999999998865

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.35  E-value=1.9e-07  Score=48.75  Aligned_cols=27  Identities=37%  Similarity=0.816  Sum_probs=24.1

Q ss_pred             ccccCcccccccCchhHHHHHhhhcCC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=1.2e-07  Score=50.08  Aligned_cols=27  Identities=22%  Similarity=0.450  Sum_probs=25.0

Q ss_pred             CCccccCcccccccCchhHHHHHhhhc
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      ++||.|+.|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999884

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=1e-08  Score=67.98  Aligned_cols=52  Identities=19%  Similarity=0.355  Sum_probs=45.4

Q ss_pred             cCCCCCCCCCCCCCC-CCCCC---CCccccCcccccccCchhHHHHH-hhhcCCCCC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTT---AKVFSCNFCMRKFFSSQALGGHQ-NAHKRERGA   90 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htg---ekpf~C~~Cgk~F~~~~~L~~H~-~~H~gekp~   90 (187)
                      +.++.|.....|..| ++|++   +++|.|.+|++.|.....|..|+ +.|.++++.
T Consensus        12 ~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A           12 ICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             SSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            467899999999988 67885   89999999999999999999998 678877765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.32  E-value=2.9e-07  Score=53.22  Aligned_cols=29  Identities=28%  Similarity=0.291  Sum_probs=26.2

Q ss_pred             CCCCCccccCcccccccCchhHHHHHhhh
Q 043322           56 PTTAKVFSCNFCMRKFFSSQALGGHQNAH   84 (187)
Q Consensus        56 Htgekpf~C~~Cgk~F~~~~~L~~H~~~H   84 (187)
                      +.+++||.|++|+|+|.+.+.|..|+..+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py~   31 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAYY   31 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHHT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCeE
Confidence            57899999999999999999999998543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.31  E-value=3.3e-08  Score=66.15  Aligned_cols=53  Identities=15%  Similarity=0.276  Sum_probs=45.5

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCC----CccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTA----KVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htge----kpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      ...++.|.....|..| ++|.+.    ++|.|.+|++.|.....|..|+++|++++++
T Consensus        19 ~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   76 (86)
T 1x6h_A           19 SHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGV   76 (86)
T ss_dssp             SSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSC
T ss_pred             CCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCc
Confidence            3467789998889888 445544    8999999999999999999999999999887

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=2.2e-07  Score=62.08  Aligned_cols=67  Identities=13%  Similarity=0.139  Sum_probs=50.9

Q ss_pred             CCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCC
Q 043322           47 SRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus        47 ~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~  125 (187)
                      +.+|..| ++|.+++|+.|.+|++.|. ...|..|+ .|.+++|+....            .++.|. ...|..|+++|.
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~------------C~~~~~-~~~l~~H~~~c~   66 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGN------------CGRNVL-VKDLKTHPEVCG   66 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSS------------SCCEEE-TTGGGTHHHHBT
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEccc------------CCCcCc-HHHHHHHHHHcc
Confidence            4578888 5699999999999999995 88999999 888888862211            145555 367888888886


Q ss_pred             CCC
Q 043322          126 PSR  128 (187)
Q Consensus       126 p~~  128 (187)
                      ...
T Consensus        67 ~~~   69 (75)
T 2d9k_A           67 REG   69 (75)
T ss_dssp             TBS
T ss_pred             CCc
Confidence            543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=1e-07  Score=61.63  Aligned_cols=47  Identities=13%  Similarity=0.165  Sum_probs=42.2

Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           38 KLGGNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      .+.++.|.....|..      +++|.|..|++.|.....|..|+++|++++||
T Consensus        22 ~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~   68 (73)
T 2ctu_A           22 SKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTS   68 (73)
T ss_dssp             SSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCS
T ss_pred             CcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCC
Confidence            356778888888776      78999999999999999999999999999987

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.51  E-value=1.8e-07  Score=48.63  Aligned_cols=26  Identities=31%  Similarity=0.674  Sum_probs=24.1

Q ss_pred             CccccCcccccccCchhHHHHHhhhc
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      +||.|+.|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999874

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.19  E-value=1e-07  Score=62.04  Aligned_cols=53  Identities=26%  Similarity=0.421  Sum_probs=44.0

Q ss_pred             Ccceeec-cCCCCCCCCCCCCCC-CCCCCCCccccCc--ccccccCchhHHHHHhhh
Q 043322           32 GEWLNLK-LGGNSLSTSRDPDSP-ARPTTAKVFSCNF--CMRKFFSSQALGGHQNAH   84 (187)
Q Consensus        32 ~~~l~l~-~~~~sF~~~~~L~~h-~~Htgekpf~C~~--Cgk~F~~~~~L~~H~~~H   84 (187)
                      ..+.+.. -.++.|.....|..| ++|++++||.|.+  |++.|.....|..|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4454432 167899999999988 7899999999975  999999999999999876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.15  E-value=1.2e-07  Score=68.58  Aligned_cols=48  Identities=17%  Similarity=0.167  Sum_probs=43.1

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCC
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      .+.++.|.....|..| ++|  ++||.|++|++.|.....|..|+++|++.
T Consensus        78 ~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           78 PLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            3578899999999888 678  89999999999999999999999999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.14  E-value=5.6e-08  Score=65.90  Aligned_cols=51  Identities=24%  Similarity=0.325  Sum_probs=45.3

Q ss_pred             cCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           39 LGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      +.++.|.....|..| ++|++++||.|.+|++.|.....|..|+++|.+ ++|
T Consensus         8 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~   59 (88)
T 1llm_C            8 ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPI   59 (88)
T ss_dssp             TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-Ccc
Confidence            467789998899888 679999999999999999999999999999885 555

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.08  E-value=1.9e-07  Score=61.59  Aligned_cols=52  Identities=15%  Similarity=0.185  Sum_probs=43.6

Q ss_pred             ccCCCCCCCCCCCCCC-C-CCCCC-CccccCcccccccCchhHHHHHhhh-cCCCC
Q 043322           38 KLGGNSLSTSRDPDSP-A-RPTTA-KVFSCNFCMRKFFSSQALGGHQNAH-KRERG   89 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~-~Htge-kpf~C~~Cgk~F~~~~~L~~H~~~H-~gekp   89 (187)
                      .+.++.|.....|..| + .|.++ ++|.|.+|++.|.....|..|+++| ..+.|
T Consensus        19 ~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           19 YICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             TTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            3577899999999998 3 58875 8999999999999999999999874 44554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.05  E-value=1.6e-06  Score=45.68  Aligned_cols=27  Identities=30%  Similarity=0.615  Sum_probs=25.1

Q ss_pred             CccccC--cccccccCchhHHHHHhhhcC
Q 043322           60 KVFSCN--FCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        60 kpf~C~--~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      +||.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            579999  999999999999999999974

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.01  E-value=1.2e-07  Score=63.07  Aligned_cols=69  Identities=14%  Similarity=0.124  Sum_probs=55.0

Q ss_pred             cccc--CcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCCCCCC--CCccC
Q 043322           61 VFSC--NFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSRDGA--GVGAR  136 (187)
Q Consensus        61 pf~C--~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~~~~~--~~~~~  136 (187)
                      ||.|  +.|++.|.....|..|+++|.+++||....          +..++.|.....|..|+++|++..|..  .++..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~   70 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH----------EGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFV   70 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCS----------TTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCE
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCC----------CCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCc
Confidence            6899  999999999999999999999999873322          013788999999999999998876643  14665


Q ss_pred             CCC
Q 043322          137 FND  139 (187)
Q Consensus       137 f~~  139 (187)
                      |..
T Consensus        71 f~~   73 (85)
T 2j7j_A           71 GKT   73 (85)
T ss_dssp             ESS
T ss_pred             cCC
Confidence            543

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.93  E-value=3.4e-06  Score=49.82  Aligned_cols=17  Identities=18%  Similarity=0.253  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eq2_A           19 GKAFSQTSKLARHQRVH   35 (46)
T ss_dssp             CCCCSSHHHHHHHGGGG
T ss_pred             CcccCCHHHHHHHHHHc
Confidence            89999999999999999

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.92  E-value=3.9e-06  Score=49.61  Aligned_cols=27  Identities=19%  Similarity=0.174  Sum_probs=23.6

Q ss_pred             CCCCCCchhhHhhhccCCCCCCCCCCccCCCCCCCCCCCCCCcccccc
Q 043322          108 HTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEE  155 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~~  155 (187)
                      ++.|.+...|..|+++|                     ++++||.|+.
T Consensus        19 ~k~f~~~~~L~~H~~~H---------------------~~~k~~~C~~   45 (46)
T 2em6_A           19 GKEFSQSSHLQTHQRVH---------------------TGEKPSGPSS   45 (46)
T ss_dssp             CCBCSSHHHHHHHHTTT---------------------SSSCCCCTTC
T ss_pred             CcccCCHHHHHHHHHHc---------------------CCCCCCCCCC
Confidence            89999999999999999                     6667888875

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.91  E-value=3.9e-06  Score=49.58  Aligned_cols=17  Identities=12%  Similarity=0.133  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2enf_A           19 GKVFTQNSHLVRHRGIH   35 (46)
T ss_dssp             CCBCSSHHHHHHHHTTT
T ss_pred             CcccCCHHHHHHHHHhh
Confidence            89999999999999999

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.90  E-value=3.1e-06  Score=50.07  Aligned_cols=27  Identities=15%  Similarity=0.158  Sum_probs=23.5

Q ss_pred             CCCCCCchhhHhhhccCCCCCCCCCCccCCCCCCCCCCCCCCcccccc
Q 043322          108 HTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEE  155 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~~  155 (187)
                      ++.|.+...|..|+++|                     ++++||.|++
T Consensus        19 ~k~f~~~~~L~~H~~~H---------------------~~~k~~~C~~   45 (46)
T 2yth_A           19 GKRFTQNSHLHSHQRVH---------------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCBSSHHHHHHHGGGG---------------------TTCCCSSCCC
T ss_pred             CcccCCHHHHHHHHHhc---------------------CCCCCCCCCC
Confidence            89999999999999999                     5667888875

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.87  E-value=5.1e-06  Score=49.05  Aligned_cols=17  Identities=12%  Similarity=0.161  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2yti_A           19 GKVFTQNSHLARHRGIH   35 (46)
T ss_dssp             CCCCSSHHHHHHHHTTT
T ss_pred             CcccCChhHHHHHhHhc
Confidence            89999999999999999

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.86  E-value=5.7e-06  Score=48.81  Aligned_cols=17  Identities=12%  Similarity=0.161  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2ytn_A           19 GKVFTQNSHLARHRGIH   35 (46)
T ss_dssp             CCBCSSHHHHHHHGGGT
T ss_pred             CCeeCCHHHHHHHhhhc
Confidence            89999999999999999

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=97.85  E-value=2.4e-06  Score=52.55  Aligned_cols=48  Identities=10%  Similarity=0.045  Sum_probs=37.6

Q ss_pred             cccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCC
Q 043322           68 MRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus        68 gk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~  127 (187)
                      +|.|.....|..|+++|++++||....            .|+.|.....|..|+++|+..
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~------------C~k~f~~~~~L~~H~~~H~~~   50 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI------------CYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT------------TCCEESSHHHHHHHHHHHTTT
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC------------CCcccCCHHHHHHHHHHhccC
Confidence            467888888888998998888863221            288999999999999999543

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.85  E-value=5.8e-06  Score=48.79  Aligned_cols=17  Identities=12%  Similarity=0.292  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eq1_A           19 GKAFRAHSNLTTHQVIH   35 (46)
T ss_dssp             TCCCSSHHHHHHHHTTT
T ss_pred             ChhhCCHHHHHHHHHHh
Confidence            89999999999999999

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.84  E-value=5.8e-06  Score=48.70  Aligned_cols=17  Identities=12%  Similarity=0.385  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ep1_A           19 GKSFIKKSQLHVHQRIH   35 (46)
T ss_dssp             CCCCSSHHHHHHHHGGG
T ss_pred             CchhCCHHHHHHHHHHh
Confidence            89999999999999999

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=97.84  E-value=6.5e-06  Score=48.55  Aligned_cols=17  Identities=24%  Similarity=0.343  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2em0_A           19 DMCFSQASSLRLHQNVH   35 (46)
T ss_dssp             CCCCSSHHHHHHHGGGG
T ss_pred             CcccCCHHHHHHHHHHc
Confidence            89999999999999999

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.83  E-value=6e-06  Score=48.78  Aligned_cols=17  Identities=18%  Similarity=0.296  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eoh_A           19 RKTFIQIGHLNQHKRVH   35 (46)
T ss_dssp             CCCCSSHHHHHHHHHHC
T ss_pred             CchhCCHHHHHHHHHHh
Confidence            89999999999999999

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.83  E-value=2.1e-06  Score=50.87  Aligned_cols=28  Identities=14%  Similarity=0.100  Sum_probs=24.4

Q ss_pred             CCCCCCchhhHhhhccCCCCCCCCCCccCCCCCCCCCCCCCCccccccc
Q 043322          108 HTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEEA  156 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~~~  156 (187)
                      ++.|.+...|..|+++|                     ++++||.|++|
T Consensus        19 ~k~f~~~~~L~~H~~~H---------------------~~~k~~~C~~g   46 (46)
T 2yto_A           19 GKAFTRKSGLHIHQQSH---------------------TGERHSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHHHH---------------------TCCCBTTTBCC
T ss_pred             CCccCCHhHHHHHHHHc---------------------CCCCCCCCCCC
Confidence            89999999999999999                     56688888764

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.82  E-value=8.5e-06  Score=48.11  Aligned_cols=17  Identities=18%  Similarity=0.304  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2enh_A           19 RKAFSHHASLTQHQRVH   35 (46)
T ss_dssp             CCBCSSSHHHHHHGGGS
T ss_pred             CchhCCHHHHHHHHHHh
Confidence            89999999999999999

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.82  E-value=3.9e-06  Score=49.46  Aligned_cols=27  Identities=11%  Similarity=0.160  Sum_probs=23.5

Q ss_pred             CCCCCCchhhHhhhccCCCCCCCCCCccCCCCCCCCCCCCCCcccccc
Q 043322          108 HTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEE  155 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~~  155 (187)
                      ++.|.+...|..|+++|                     ++++||.|+.
T Consensus        19 ~k~f~~~~~L~~H~~~H---------------------~~~~p~~C~~   45 (46)
T 2yts_A           19 GKSFIQKSHLNRHRRIH---------------------TGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHGGGT---------------------SSCCSSCCCC
T ss_pred             ChhhCChHHHHHHHHhc---------------------CCCCCcCCCC
Confidence            89999999999999999                     5667888875

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.81  E-value=8.2e-06  Score=48.24  Aligned_cols=17  Identities=24%  Similarity=0.147  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eon_A           19 GKAFRVSSHLVQHHSVH   35 (46)
T ss_dssp             CCBCSSHHHHHHHTTTT
T ss_pred             CcccCcHHHHHHHHHhc
Confidence            89999999999999999

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.80  E-value=3.9e-06  Score=49.54  Aligned_cols=17  Identities=12%  Similarity=0.202  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ep3_A           19 GKAFTDRSNLFTHQKIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHTTT
T ss_pred             CchhCCHHHHHHHHHHc
Confidence            89999999999999999

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.80  E-value=7.5e-06  Score=48.27  Aligned_cols=17  Identities=12%  Similarity=0.192  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2emg_A           19 GKVFTHKTNLIIHQKIH   35 (46)
T ss_dssp             CCBCSSHHHHHHHHTTT
T ss_pred             CcccCCHHHHHHHHHHh
Confidence            89999999999999999

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.79  E-value=7.9e-06  Score=48.08  Aligned_cols=17  Identities=12%  Similarity=0.147  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eop_A           19 GKSFSFNSQLIVHQRIH   35 (46)
T ss_dssp             CCBCSSHHHHHHHHTTT
T ss_pred             CchhCCHHHHHHHHHHc
Confidence            89999999999999999

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=97.79  E-value=2.5e-06  Score=50.52  Aligned_cols=17  Identities=18%  Similarity=0.233  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2emj_A           19 GKSFSISSQLATHQRIH   35 (46)
T ss_dssp             SCEESSHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHh
Confidence            89999999999999999

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.79  E-value=7.4e-06  Score=48.23  Aligned_cols=17  Identities=18%  Similarity=0.251  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eq4_A           19 GKSFSRAPCLLKHERLH   35 (46)
T ss_dssp             TBCCSCHHHHHHHHHHC
T ss_pred             CCccCchHHHHHHHHhc
Confidence            89999999999999999

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.79  E-value=5.7e-06  Score=48.73  Aligned_cols=17  Identities=12%  Similarity=0.225  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eq3_A           19 GKAFSVRSSLTTHQAIH   35 (46)
T ss_dssp             TEECSSHHHHHHHHTTS
T ss_pred             ChhhCCHHHHHHHHHHh
Confidence            89999999999999999

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.79  E-value=7.8e-06  Score=47.56  Aligned_cols=17  Identities=12%  Similarity=0.036  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (44)
T 2en7_A           19 GKAFRSKSYLIIHTRTH   35 (44)
T ss_dssp             CCCCSSHHHHHHHHTTT
T ss_pred             CCccCCHHHHHHHhhhc
Confidence            89999999999999999

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.78  E-value=5.2e-06  Score=49.05  Aligned_cols=17  Identities=18%  Similarity=0.309  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2emf_A           19 GKAFTRKSTLSMHQKIH   35 (46)
T ss_dssp             CCEESCHHHHHHHGGGT
T ss_pred             CchhCCHHHHHHHHHHh
Confidence            89999999999999999

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.78  E-value=9.2e-06  Score=47.94  Aligned_cols=17  Identities=12%  Similarity=-0.001  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ytq_A           19 GKAFSSKSYLIIHMRTH   35 (46)
T ss_dssp             CCBCSCHHHHHHHHTTT
T ss_pred             ChhhCChHHHHHHHHHh
Confidence            89999999999999999

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.78  E-value=9.3e-06  Score=47.77  Aligned_cols=17  Identities=12%  Similarity=0.247  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ytr_A           19 GKAFSQTSKLARHQRIH   35 (46)
T ss_dssp             CCCCSSHHHHHHHHTTT
T ss_pred             CCccCCHHHHHHHHHhc
Confidence            89999999999999999

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.76  E-value=8.2e-06  Score=48.10  Aligned_cols=17  Identities=24%  Similarity=0.370  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eoq_A           19 GKSFCGRSRLNRHSMVH   35 (46)
T ss_dssp             CCCCSSHHHHHHHHHHT
T ss_pred             CchhCCHHHHHHHHHHc
Confidence            89999999999999999

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.76  E-value=5.9e-06  Score=48.81  Aligned_cols=27  Identities=15%  Similarity=0.122  Sum_probs=23.5

Q ss_pred             CCCCCCchhhHhhhccCCCCCCCCCCccCCCCCCCCCCCCCCcccccc
Q 043322          108 HTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEE  155 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~~  155 (187)
                      ++.|.+...|..|+++|                     ++++||.|++
T Consensus        19 ~k~F~~~~~L~~H~~~H---------------------~~~k~~~C~~   45 (46)
T 2ytp_A           19 GKAFARKSTLIMHQRIH---------------------TGEKPSGPSS   45 (46)
T ss_dssp             CCEESSHHHHHHHHTTT---------------------SCCCCCSSCC
T ss_pred             CcccCCHHHHHHHHHHh---------------------CCCCCCCCCC
Confidence            89999999999999999                     5667888875

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.74  E-value=5.4e-06  Score=48.85  Aligned_cols=17  Identities=12%  Similarity=0.161  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ytf_A           19 QKAFNTKSNLIVHQRTH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHTS
T ss_pred             CcccCCHHHHHHHHHHh
Confidence            89999999999999999

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.74  E-value=7.6e-06  Score=48.18  Aligned_cols=17  Identities=12%  Similarity=0.217  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2eoe_A           19 GKVFTQNSHLANHQRIH   35 (46)
T ss_dssp             TEECSSHHHHHHHHGGG
T ss_pred             ChhhCCHHHHHHHHHHc
Confidence            89999999999999999

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=97.73  E-value=7e-06  Score=48.47  Aligned_cols=17  Identities=18%  Similarity=0.235  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2emk_A           19 GKAFSQTTHLIQHQRVH   35 (46)
T ss_dssp             CCBCSCHHHHHHHHHHH
T ss_pred             CchhCCHHHHHHHHHHc
Confidence            89999999999999999

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.71  E-value=6.7e-06  Score=48.40  Aligned_cols=17  Identities=12%  Similarity=0.303  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2yrj_A           19 GKAFAQKANLTQHQRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHTTT
T ss_pred             CCccCCHHHHHHHHHHc
Confidence            89999999999999999

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.70  E-value=6.9e-06  Score=48.44  Aligned_cols=17  Identities=12%  Similarity=0.157  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ytj_A           19 GKAFTIRSNLIKHQKIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHT
T ss_pred             ChhhCCHHHHHHHHHHc
Confidence            89999999999999999

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.70  E-value=4.4e-06  Score=49.24  Aligned_cols=17  Identities=12%  Similarity=0.137  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eow_A           19 GKAFRARSSLAIHQATH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CChhcCHHHHHHHHHHc
Confidence            89999999999999999

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.70  E-value=1.4e-05  Score=47.09  Aligned_cols=17  Identities=29%  Similarity=0.389  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2elz_A           19 GKGYNRRLNLDMHQRVH   35 (46)
T ss_dssp             CCBCSSHHHHHHHGGGG
T ss_pred             CchhCCHHHHHHHHHhc
Confidence            89999999999999999

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=97.70  E-value=7.6e-06  Score=48.17  Aligned_cols=17  Identities=12%  Similarity=0.075  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2el4_A           19 AKTFSLKSQLIVHQRSH   35 (46)
T ss_dssp             SCEESSHHHHHHHGGGS
T ss_pred             CchhCCHHHHHHHHHHh
Confidence            89999999999999999

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.69  E-value=6.9e-06  Score=48.44  Aligned_cols=17  Identities=12%  Similarity=0.257  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eml_A           19 GKAFSHRQSLSVHQRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHGGG
T ss_pred             CCccCCHHHHHHHHHHh
Confidence            89999999999999999

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=97.69  E-value=6.4e-06  Score=48.60  Aligned_cols=17  Identities=18%  Similarity=0.280  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ema_A           19 GKVFSRNSQLSQHQKIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHTGG
T ss_pred             cchhCCHHHHHHHHHhc
Confidence            89999999999999999

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.67  E-value=1.5e-05  Score=46.95  Aligned_cols=17  Identities=18%  Similarity=0.442  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2epz_A           19 GKAFSDHIGLNQHRRIH   35 (46)
T ss_dssp             CCCBSSHHHHHHHHTTT
T ss_pred             CceeCCHHHHHHHHHHh
Confidence            89999999999999999

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.66  E-value=9.7e-06  Score=47.78  Aligned_cols=17  Identities=12%  Similarity=0.305  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2emi_A           19 GKAFIQKSTLSMHQRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHGGG
T ss_pred             CcccCCHHHHHHHHhHh
Confidence            89999999999999999

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.66  E-value=1.3e-05  Score=47.40  Aligned_cols=17  Identities=12%  Similarity=0.200  Sum_probs=16.5

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2eom_A           19 GKFFLQASNFIQHRRIH   35 (46)
T ss_dssp             CCCCSSHHHHHHHHHHH
T ss_pred             CCeeCChHHHHHHHHHh
Confidence            89999999999999999

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.65  E-value=1.1e-05  Score=47.61  Aligned_cols=17  Identities=12%  Similarity=0.337  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ep2_A           19 GKSFTKKSQLHVHQQIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHTT
T ss_pred             CcccCCHHHHHHHHHHh
Confidence            89999999999999999

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.64  E-value=1.2e-05  Score=47.34  Aligned_cols=17  Identities=18%  Similarity=0.245  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eov_A           19 GKSFTWKSRLRIHQKCH   35 (46)
T ss_dssp             CCBCSSHHHHHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHhc
Confidence            89999999999999999

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.64  E-value=8.8e-06  Score=47.97  Aligned_cols=17  Identities=18%  Similarity=0.270  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ytg_A           19 GKSYNQRVHLTQHQRVH   35 (46)
T ss_dssp             CCEESSSHHHHTTGGGG
T ss_pred             CcccCCHHHHHHHHHHc
Confidence            89999999999999999

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.64  E-value=1.4e-05  Score=47.07  Aligned_cols=17  Identities=18%  Similarity=0.386  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2en9_A           19 KKTFTQSSSLTVHQRIH   35 (46)
T ss_dssp             CCBCSSHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHc
Confidence            89999999999999999

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=97.63  E-value=1e-05  Score=47.60  Aligned_cols=17  Identities=18%  Similarity=0.143  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2em9_A           19 GKSFRWASCLLKHQRVH   35 (46)
T ss_dssp             CCEESSHHHHHHHGGGG
T ss_pred             ccccCChHHHHHHHHHh
Confidence            89999999999999999

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.62  E-value=1.3e-05  Score=47.21  Aligned_cols=17  Identities=24%  Similarity=0.356  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2eq0_A           19 GKVFRRNSHLARHQLIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHTTT
T ss_pred             CchhCCHHHHHHHHHHc
Confidence            89999999999999999

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.62  E-value=6.7e-06  Score=48.41  Aligned_cols=17  Identities=18%  Similarity=0.348  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2emm_A           19 GKSFIQSAHLIQHQRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHh
Confidence            89999999999999999

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.62  E-value=5.6e-06  Score=48.91  Aligned_cols=17  Identities=29%  Similarity=0.272  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eoz_A           19 GKAFVLSAHLNQHLRVH   35 (46)
T ss_dssp             TEEESSHHHHHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHh
Confidence            88999999999999999

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.61  E-value=1.1e-05  Score=47.54  Aligned_cols=17  Identities=18%  Similarity=0.331  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2en1_A           19 GKRFTQNSQLHSHQRVH   35 (46)
T ss_dssp             TEEESSHHHHHHHGGGG
T ss_pred             CcccCCHHHHHHHHHHc
Confidence            88999999999999999

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.61  E-value=2.1e-05  Score=45.21  Aligned_cols=18  Identities=11%  Similarity=0.180  Sum_probs=16.8

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ++.|.+...|..|+++|.
T Consensus        17 ~k~f~~~~~L~~H~~~H~   34 (42)
T 2yte_A           17 KETFSDNNRLVQHQKMHT   34 (42)
T ss_dssp             CCBCSSHHHHHHHHHHTS
T ss_pred             CCccCCHHHHHHHHHHhC
Confidence            899999999999999993

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.61  E-value=1.1e-05  Score=47.42  Aligned_cols=17  Identities=29%  Similarity=0.354  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2en8_A           19 GKNFCYISALRIHQRVH   35 (46)
T ss_dssp             CCEESSHHHHHHHHTTT
T ss_pred             CcccCCHHHHHHHHHHh
Confidence            89999999999999999

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.61  E-value=2.7e-06  Score=52.43  Aligned_cols=36  Identities=14%  Similarity=0.164  Sum_probs=32.1

Q ss_pred             ccCCCCCCCCCCCCCC-C-CCCCCCccccCcccccccC
Q 043322           38 KLGGNSLSTSRDPDSP-A-RPTTAKVFSCNFCMRKFFS   73 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~-~Htgekpf~C~~Cgk~F~~   73 (187)
                      .+.++.|.....|..| + +|++++||.|.+|++.|.+
T Consensus        16 ~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           16 QSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4577899999999998 5 8999999999999999975

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.60  E-value=8.1e-06  Score=48.19  Aligned_cols=17  Identities=12%  Similarity=0.100  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2em4_A           19 GKAFKTKSSLICHRRSH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHhc
Confidence            89999999999999999

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.60  E-value=7.4e-06  Score=48.29  Aligned_cols=17  Identities=12%  Similarity=0.157  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ytk_A           19 GKVFTQNSHLTNHWRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHH
Confidence            89999999999999999

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.60  E-value=7.2e-06  Score=48.42  Aligned_cols=17  Identities=12%  Similarity=0.294  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2em2_A           19 GKAFRQNIHLASHLRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CchhCCHHHHHHHHHHh
Confidence            89999999999999999

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.60  E-value=1.3e-05  Score=47.06  Aligned_cols=17  Identities=18%  Similarity=0.139  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eme_A           19 GKAFGLSAELVRHQRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHGGG
T ss_pred             ChhhCCHHHHHHHHHhc
Confidence            89999999999999999

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=97.58  E-value=1.4e-05  Score=47.06  Aligned_cols=17  Identities=18%  Similarity=0.321  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ely_A           19 GKGFSRRSALNVHHKLH   35 (46)
T ss_dssp             CCCBSSTTHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHc
Confidence            89999999999999999

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.58  E-value=1.9e-05  Score=45.88  Aligned_cols=17  Identities=18%  Similarity=0.157  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (44)
T 2eoj_A           19 GKVFSRKDQLVSHQKTH   35 (44)
T ss_dssp             TEECSSHHHHHHHHTTS
T ss_pred             CCccCCHHHHHHHHHHc
Confidence            89999999999999999

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.58  E-value=1.1e-05  Score=47.38  Aligned_cols=17  Identities=12%  Similarity=0.083  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2epw_A           19 GKAFCWKSQLIMHQRTH   35 (46)
T ss_dssp             CCEESSSHHHHHHHHHC
T ss_pred             CCccCCHHHHHHHHHHh
Confidence            89999999999999999

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.58  E-value=1.1e-05  Score=47.48  Aligned_cols=17  Identities=18%  Similarity=0.262  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ysp_A           19 GKGYNSKFNLDMHQKVH   35 (46)
T ss_dssp             TEEESCHHHHHHHHTTS
T ss_pred             CCccCCHHHHHHHHHhh
Confidence            89999999999999999

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.57  E-value=1.5e-05  Score=46.86  Aligned_cols=17  Identities=12%  Similarity=0.112  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ene_A           19 GKVFRHNSYLSRHQRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHTTT
T ss_pred             CchhCChHHHHHHHhhc
Confidence            89999999999999999

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.57  E-value=9.6e-06  Score=47.80  Aligned_cols=17  Identities=12%  Similarity=0.223  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2em3_A           19 SKAFTQKAHLAQHQKTH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHh
Confidence            89999999999999999

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.57  E-value=6.6e-06  Score=48.54  Aligned_cols=17  Identities=12%  Similarity=0.198  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2emh_A           19 GKAFTDRSNLIKHQKIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CchhCCHHHHHHHHHhc
Confidence            89999999999999999

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.56  E-value=7e-06  Score=48.41  Aligned_cols=17  Identities=12%  Similarity=0.251  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2emp_A           19 GKAFSVYSSLTTHQVIH   35 (46)
T ss_dssp             CCEESCHHHHHHHHHHH
T ss_pred             CchhCCHHHHHHHHHHc
Confidence            89999999999999999

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.56  E-value=1.7e-05  Score=46.70  Aligned_cols=17  Identities=18%  Similarity=0.352  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2em7_A           19 GKGFICRRDLYTHHMVH   35 (46)
T ss_dssp             CCEESCHHHHHHHGGGG
T ss_pred             cchhCCHHHHHHHHHHh
Confidence            89999999999999999

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=97.55  E-value=1.6e-05  Score=45.83  Aligned_cols=17  Identities=18%  Similarity=0.161  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        17 ~k~f~~~~~L~~H~~~H   33 (42)
T 2el5_A           17 GKAFNRKDQLISHQRTH   33 (42)
T ss_dssp             CCEESSHHHHHHHHGGG
T ss_pred             ChhhCCHHHHHHHHHhc
Confidence            89999999999999999

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.55  E-value=9.5e-06  Score=47.81  Aligned_cols=17  Identities=18%  Similarity=0.262  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2emy_A           19 GKAFSRKYQLISHQRTH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CcccCcHHHHHHHHHHc
Confidence            89999999999999999

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.54  E-value=2.4e-05  Score=44.96  Aligned_cols=18  Identities=17%  Similarity=0.143  Sum_probs=16.6

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ++.|.+...|..|+++|+
T Consensus        18 ~k~f~~~~~L~~H~~~H~   35 (42)
T 2ytb_A           18 GKAFSQKGSLIVHIRVHT   35 (42)
T ss_dssp             TCCBSSHHHHHTTGGGTS
T ss_pred             cchhCCHHHHHHHHHHhC
Confidence            899999999999999993

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.53  E-value=7.8e-06  Score=48.20  Aligned_cols=17  Identities=18%  Similarity=0.210  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2yu8_A           19 GKVFTQNSHLARHRRVH   35 (46)
T ss_dssp             CCEESSSHHHHHHTHHH
T ss_pred             CchhCCHHHHHHHHHhc
Confidence            89999999999999999

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=97.53  E-value=1.8e-05  Score=46.60  Aligned_cols=17  Identities=18%  Similarity=0.303  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2el6_A           19 EKSFSGKLRLLVHQRMH   35 (46)
T ss_dssp             SCEESSHHHHHHHHGGG
T ss_pred             CcccCCHHHHHHHHHHc
Confidence            89999999999999999

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.51  E-value=1e-05  Score=47.62  Aligned_cols=17  Identities=12%  Similarity=0.344  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eor_A           19 GKAFIHDSQLQEHQRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CCCcCCHHHHHHHHHhc
Confidence            89999999999999999

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.51  E-value=2.2e-05  Score=45.72  Aligned_cols=17  Identities=12%  Similarity=0.280  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        17 ~k~f~~~~~L~~H~~~H   33 (43)
T 2yrm_A           17 DCRFSEEASLKRHTLQT   33 (43)
T ss_dssp             CCCBSSHHHHHHHHHHH
T ss_pred             CCeeCChHHHHHHHHhh
Confidence            89999999999999999

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.50  E-value=2e-05  Score=46.35  Aligned_cols=17  Identities=12%  Similarity=0.110  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2enc_A           19 GKGFYTNSQCYSHQRSH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHS
T ss_pred             CCcCCChHHHHHHHHHh
Confidence            89999999999999999

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.49  E-value=2.2e-05  Score=46.22  Aligned_cols=17  Identities=12%  Similarity=0.194  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2em5_A           19 GRGFTLKSHLNQHQRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHTTT
T ss_pred             CCccCCHHHHHHHHHHh
Confidence            89999999999999999

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.49  E-value=2e-05  Score=46.47  Aligned_cols=17  Identities=12%  Similarity=0.139  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ytm_A           19 GKAFGDNSSCTQHQRLH   35 (46)
T ss_dssp             TBCCSSHHHHHHHHHHH
T ss_pred             CchhCCHHHHHHHHHHc
Confidence            89999999999999999

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.49  E-value=1.8e-05  Score=46.68  Aligned_cols=17  Identities=18%  Similarity=0.190  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2emz_A           19 GKGFGRRSHLAGHLRLH   35 (46)
T ss_dssp             CCCCSSHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHh
Confidence            89999999999999999

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.48  E-value=1.9e-05  Score=46.49  Aligned_cols=25  Identities=20%  Similarity=0.244  Sum_probs=20.7

Q ss_pred             HhhcCC-CC-----CCCCCCchhhHhhhccC
Q 043322          100 MTMMGL-PV-----HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       100 r~Htge-p~-----gk~F~~~s~L~~H~riH  124 (187)
                      ++|+++ ||     ++.|.+...|..|+++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITH   35 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHH
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHc
Confidence            445555 55     89999999999999999

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.48  E-value=2.8e-05  Score=45.30  Aligned_cols=17  Identities=18%  Similarity=0.081  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (44)
T 2eou_A           19 GKIFRHSSLLIEHQALH   35 (44)
T ss_dssp             CCCCSSHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHH
Confidence            89999999999999999

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.48  E-value=3.4e-05  Score=44.43  Aligned_cols=18  Identities=17%  Similarity=0.248  Sum_probs=16.6

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ++.|.+...|..|+++|.
T Consensus        18 ~k~f~~~~~L~~H~~~H~   35 (42)
T 2eos_A           18 GTRFRHLQTLKSHLRIHT   35 (42)
T ss_dssp             CCCBSSHHHHHHHTTTTS
T ss_pred             CCccCCHHHHHHHHHhcC
Confidence            899999999999999993

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.48  E-value=2.3e-05  Score=46.16  Aligned_cols=17  Identities=18%  Similarity=0.198  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2eoy_A           19 EKTFSCSKYLTQHERIH   35 (46)
T ss_dssp             CCEESSSHHHHHHHTTC
T ss_pred             CCcCCCHHHHHHHHHHc
Confidence            89999999999999999

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.48  E-value=1.5e-05  Score=46.45  Aligned_cols=17  Identities=12%  Similarity=0.098  Sum_probs=16.4

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        17 ~k~f~~~~~L~~H~~~H   33 (44)
T 2emx_A           17 EKAFSSKSYLLVHQQTH   33 (44)
T ss_dssp             SCEESSHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHh
Confidence            89999999999999999

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.48  E-value=2.6e-05  Score=45.85  Aligned_cols=25  Identities=20%  Similarity=0.329  Sum_probs=20.2

Q ss_pred             HhhcCC-CC-----CCCCCCchhhHhhhccC
Q 043322          100 MTMMGL-PV-----HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       100 r~Htge-p~-----gk~F~~~s~L~~H~riH  124 (187)
                      ++|+++ ||     ++.|.+...|..|+++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH   35 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHh
Confidence            345555 44     89999999999999999

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.47  E-value=3.8e-05  Score=45.15  Aligned_cols=17  Identities=12%  Similarity=0.174  Sum_probs=16.1

Q ss_pred             CCCCCCchhhHhhhc-cC
Q 043322          108 HTNMVRSLGVRAHSL-VH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~r-iH  124 (187)
                      ++.|.+...|..|++ +|
T Consensus        19 ~k~F~~~~~L~~H~~~~H   36 (47)
T 2epx_A           19 GKAFIQNTSLIRHWRYYH   36 (47)
T ss_dssp             CCCBSSHHHHHHHHTTTT
T ss_pred             CchhCChHHHHHHhHhhc
Confidence            899999999999998 88

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.47  E-value=2e-05  Score=45.70  Aligned_cols=17  Identities=12%  Similarity=0.175  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (44)
T 2eof_A           19 QKAFNTKSNLMVHQRTH   35 (44)
T ss_dssp             CCEESCHHHHHHHHHHT
T ss_pred             CcccCCHhHHHHHHHHh
Confidence            89999999999999999

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.44  E-value=2.8e-05  Score=45.26  Aligned_cols=17  Identities=12%  Similarity=0.102  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (44)
T 2emb_A           19 QATFNLRKHLIQHQKTH   35 (44)
T ss_dssp             CCEESCHHHHHHHGGGG
T ss_pred             CCccCCHHHHHHHHHHc
Confidence            89999999999999999

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.43  E-value=1.6e-05  Score=46.82  Aligned_cols=17  Identities=18%  Similarity=0.174  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2en6_A           19 GKTFSQKSILSAHQRTH   35 (46)
T ss_dssp             TEEESSHHHHHHHHHHH
T ss_pred             CcccCchHHHHHHHHHc
Confidence            89999999999999999

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.43  E-value=2e-05  Score=46.37  Aligned_cols=17  Identities=12%  Similarity=0.284  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2yso_A           19 GEIFFQYVSLIEHQVLH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHh
Confidence            89999999999999999

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.43  E-value=1.9e-05  Score=46.42  Aligned_cols=17  Identities=18%  Similarity=0.288  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2ytd_A           19 GKAFHRHTHLNEHRRIH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CCeeCChHHHHHHHHHc
Confidence            89999999999999999

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.40  E-value=4e-05  Score=43.85  Aligned_cols=25  Identities=12%  Similarity=0.117  Sum_probs=20.4

Q ss_pred             hhcCC-CC-----CCCCCCchhhHhhhccCC
Q 043322          101 TMMGL-PV-----HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       101 ~Htge-p~-----gk~F~~~s~L~~H~riH~  125 (187)
                      +|+++ ||     ++.|.+...|..|+++|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHT   34 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhC
Confidence            45555 55     899999999999999993

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.39  E-value=1.7e-05  Score=46.76  Aligned_cols=17  Identities=29%  Similarity=0.362  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~f~~~~~L~~H~~~H   35 (46)
T 2em8_A           19 GKGYKRRLDLDFHQRVH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CchhCCHHHHHHHHHHH
Confidence            89999999999999999

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.37  E-value=1.8e-05  Score=46.60  Aligned_cols=17  Identities=24%  Similarity=0.139  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      |+.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2eoo_A           19 GKNFGRHSHLIEHLKRH   35 (46)
T ss_dssp             CCEESSHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHH
Confidence            89999999999999999

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=97.35  E-value=3.2e-05  Score=44.35  Aligned_cols=18  Identities=6%  Similarity=0.032  Sum_probs=16.7

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ++.|.+...|..|+++|+
T Consensus        18 ~k~f~~~~~l~~H~~~H~   35 (42)
T 2epc_A           18 GKSFTQRGSLAVHQRSCS   35 (42)
T ss_dssp             CCEESSHHHHHHHHHHTT
T ss_pred             CcccCCHHHHHHHhhhcC
Confidence            899999999999999993

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.35  E-value=3.4e-05  Score=45.16  Aligned_cols=17  Identities=12%  Similarity=0.163  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (45)
T 2epu_A           19 GKSFRAKGNLVTHQRIH   35 (45)
T ss_dssp             TEEESSHHHHHHHHTTT
T ss_pred             CCccCChHHHHHHHHHh
Confidence            89999999999999999

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.33  E-value=3.7e-05  Score=44.72  Aligned_cols=18  Identities=11%  Similarity=0.060  Sum_probs=16.6

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ++.|.+...|..|+++|+
T Consensus        19 ~k~f~~~~~L~~H~~~H~   36 (44)
T 2yu5_A           19 DRVFTQRNYLVQHERTHA   36 (44)
T ss_dssp             SCEESSSHHHHHHHHHCC
T ss_pred             CchhCCHHHHHHHhHhcC
Confidence            889999999999999993

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.27  E-value=2.3e-05  Score=45.05  Aligned_cols=17  Identities=35%  Similarity=0.577  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        18 ~k~f~~~~~L~~H~~~H   34 (42)
T 2en2_A           18 GARFVQVAHLRAHVLIH   34 (42)
T ss_dssp             CCEESSHHHHHHHTHHH
T ss_pred             ChhhCCHHHHHHHHHHc
Confidence            89999999999999999

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.25  E-value=8.5e-06  Score=48.71  Aligned_cols=32  Identities=9%  Similarity=0.071  Sum_probs=28.4

Q ss_pred             ccCCCCCCCCCCCCCC-CCCCCCCccccCcccc
Q 043322           38 KLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMR   69 (187)
Q Consensus        38 ~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk   69 (187)
                      .+.++.|.....|..| ++|++++||.|++|+|
T Consensus        16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           16 EICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             TTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3567899999999988 7899999999999986

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.24  E-value=2.6e-05  Score=45.83  Aligned_cols=17  Identities=24%  Similarity=0.135  Sum_probs=16.2

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        19 ~k~F~~~~~L~~H~~~H   35 (46)
T 2en3_A           19 GMNFSWSCSLFKHLRSH   35 (46)
T ss_dssp             CCEESSSHHHHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHh
Confidence            88999999999999999

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.16  E-value=3.7e-05  Score=44.72  Aligned_cols=18  Identities=17%  Similarity=0.331  Sum_probs=16.5

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ++.|.+...|..|+++|+
T Consensus        19 ~k~F~~~~~L~~H~~~H~   36 (44)
T 2eox_A           19 GKAFTRIFHLTRHQKIHT   36 (44)
T ss_dssp             TEEESSSHHHHTTHHHHC
T ss_pred             CcccCCHHHHHHHHHHhC
Confidence            889999999999999993

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.11  E-value=0.00014  Score=42.47  Aligned_cols=18  Identities=17%  Similarity=0.091  Sum_probs=16.8

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ++.|.+...|..|+++|+
T Consensus        17 ~k~f~~~~~l~~H~~~H~   34 (45)
T 2epq_A           17 GLRFKRKDRMSYHVRSHD   34 (45)
T ss_dssp             TEECSCHHHHHHHHHHHS
T ss_pred             CcccCCHHHHHHHHHHcc
Confidence            899999999999999993

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.06  E-value=0.00011  Score=42.71  Aligned_cols=19  Identities=11%  Similarity=0.048  Sum_probs=17.1

Q ss_pred             CCCCCCchhhHhhhccCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p  126 (187)
                      ++.|.+...|..|+++|+.
T Consensus        19 ~k~F~~~~~L~~H~~~H~~   37 (44)
T 2epv_A           19 GKAFIWKSLLIVHERTHAG   37 (44)
T ss_dssp             CCEESSHHHHHHHHGGGSS
T ss_pred             CcccCchHHHHHHHhHhcC
Confidence            8899999999999999943

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.95  E-value=0.00041  Score=45.97  Aligned_cols=27  Identities=19%  Similarity=0.114  Sum_probs=23.2

Q ss_pred             CCCCCCchhhHhhh-ccCCCCCCCCCCccCCCCCCCCCCCCCCcccccc
Q 043322          108 HTNMVRSLGVRAHS-LVHKPSRDGAGVGARFNDADTGFGMAWTPYVLEE  155 (187)
Q Consensus       108 gk~F~~~s~L~~H~-riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~~  155 (187)
                      +++|.+++.|..|+ ++|                     ++++||.|.+
T Consensus        36 gKaFsr~s~L~~H~rriH---------------------TgEKP~~~~~   63 (73)
T 1x3c_A           36 FAAFTIQQNLILHYQAVH---------------------KSDLPAFSAE   63 (73)
T ss_dssp             CCBCSSHHHHHHHHHHHS---------------------SSCCCCCCCS
T ss_pred             ChhHcCHHHHHHHhhhhC---------------------CCCCCccccc
Confidence            89999999999997 689                     6777887765

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=0.00022  Score=41.88  Aligned_cols=17  Identities=24%  Similarity=0.153  Sum_probs=16.0

Q ss_pred             CCCCCCchhhHhhhccC
Q 043322          108 HTNMVRSLGVRAHSLVH  124 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH  124 (187)
                      ++.|.+...|..|+++|
T Consensus        21 ~k~f~~~~~L~~H~~~H   37 (48)
T 2ent_A           21 GWRFSRSDELSRHRRSH   37 (48)
T ss_dssp             CCEESSHHHHHHHHTTS
T ss_pred             CCccCCHHHHHHHHHHh
Confidence            78999999999999999

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=96.93  E-value=2.1e-05  Score=49.87  Aligned_cols=39  Identities=10%  Similarity=0.244  Sum_probs=31.4

Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCccccCcccccccCchhHHH
Q 043322           39 LGGNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGG   79 (187)
Q Consensus        39 ~~~~sF~~~~~L~~h~~Htgekpf~C~~Cgk~F~~~~~L~~   79 (187)
                      ..++.|.....|.  ++|++++||.|.+|++.|.....+..
T Consensus        19 ~C~k~F~~~~~l~--~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A           19 VCSSTFTDLEANQ--LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             SSCCEEEHHHHHH--HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             CCCchhccHHHhH--hhcCCCCCEECCCCCCccccCccccc
Confidence            4567787766665  78999999999999999998776543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.86  E-value=0.0002  Score=52.48  Aligned_cols=30  Identities=23%  Similarity=0.381  Sum_probs=27.6

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhh
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      ..|+|++||.|..|+|.|.+...|..|++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            568999999999999999999999999874

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.64  E-value=0.00033  Score=38.70  Aligned_cols=28  Identities=7%  Similarity=0.067  Sum_probs=22.5

Q ss_pred             HhhcCC-CC-----CCCCCCchhhHhhhccCCCC
Q 043322          100 MTMMGL-PV-----HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       100 r~Htge-p~-----gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++|+++ ||     ++.|.+...|..|+++|+..
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            345555 55     89999999999999999654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=96.59  E-value=0.00066  Score=38.10  Aligned_cols=20  Identities=15%  Similarity=0.257  Sum_probs=17.8

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      |+.|.+.+.|..|+++|+..
T Consensus        13 ~k~f~~~~~L~~H~~~H~~~   32 (39)
T 1njq_A           13 KREFRSAQALGGHMNVHRRD   32 (39)
T ss_dssp             CCEESSHHHHHHHHHTTCCS
T ss_pred             CcccCCHHHHHHHHHHcCCC
Confidence            89999999999999999544

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.54  E-value=2.9e-05  Score=51.50  Aligned_cols=46  Identities=20%  Similarity=0.211  Sum_probs=37.4

Q ss_pred             CCCCCCCCCCCCCCCCCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           41 GNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        41 ~~sF~~~~~L~~h~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +..| ...+|..|..|.+++||.|..|++.|. ...|..|+++|.+++
T Consensus        24 ~~~~-~~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           24 DLEL-SILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCEE-CHHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             ChHh-hHHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            4455 355667777889999999999999987 589999999998764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=96.13  E-value=0.0019  Score=35.48  Aligned_cols=19  Identities=21%  Similarity=0.128  Sum_probs=17.3

Q ss_pred             CCCCCCchhhHhhhccCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p  126 (187)
                      ++.|.+...|..|+++|..
T Consensus        18 ~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A           18 DRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CCCBSSHHHHHHHHGGGTC
T ss_pred             CcccCcHHHHHHHHHHhcc
Confidence            8999999999999999954

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=96.10  E-value=0.0016  Score=35.28  Aligned_cols=20  Identities=15%  Similarity=0.184  Sum_probs=18.1

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.+...|..|+++|+..
T Consensus        14 ~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A           14 LSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CCEESSHHHHHHHHGGGTSC
T ss_pred             CcccCCHHHHHHHHHHcCCC
Confidence            89999999999999999654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=96.02  E-value=0.0016  Score=35.20  Aligned_cols=20  Identities=20%  Similarity=0.228  Sum_probs=18.1

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.+...|..|+++|+..
T Consensus        14 ~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A           14 LKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCEESSHHHHHHHHHHTSCT
T ss_pred             cchhCCHHHHHHHHHHHcCC
Confidence            89999999999999999654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.56  E-value=0.0029  Score=34.49  Aligned_cols=20  Identities=25%  Similarity=0.317  Sum_probs=18.0

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.+...|..|+++|+..
T Consensus        16 ~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A           16 ERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCEESSHHHHHHHHTTTSTT
T ss_pred             CCccCCHHHHHHHHHHhcCC
Confidence            89999999999999999653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.42  E-value=0.0031  Score=36.21  Aligned_cols=20  Identities=20%  Similarity=0.184  Sum_probs=18.1

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      +++|.+++.|..|+++|+..
T Consensus        18 ~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A           18 DYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCEESCHHHHHHHHHHHSCC
T ss_pred             CCccCCHHHHHHHHHhcCCC
Confidence            89999999999999999753

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=95.37  E-value=0.0067  Score=32.62  Aligned_cols=21  Identities=19%  Similarity=0.188  Sum_probs=18.4

Q ss_pred             CCCCCCchhhHhhhccCCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPSR  128 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~~  128 (187)
                      |+.|.....|..|+++|++.+
T Consensus         9 ~k~F~~~~~L~~H~~~H~~~~   29 (33)
T 1rim_A            9 PKRFMRSDHLSKHITLHELLG   29 (33)
T ss_dssp             CCCCSSHHHHHHHHHHHTTTC
T ss_pred             CchhCCHHHHHHHHHHhCCCC
Confidence            899999999999999995443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.32  E-value=0.0017  Score=36.01  Aligned_cols=27  Identities=11%  Similarity=-0.005  Sum_probs=21.3

Q ss_pred             HhhcCC-CC-----CCCCCCchhhHhh-hccCCC
Q 043322          100 MTMMGL-PV-----HTNMVRSLGVRAH-SLVHKP  126 (187)
Q Consensus       100 r~Htge-p~-----gk~F~~~s~L~~H-~riH~p  126 (187)
                      ++|+++ ||     ++.|.....|..| +++|+.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            345555 55     8999999999999 999964

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.32  E-value=0.0057  Score=33.11  Aligned_cols=20  Identities=15%  Similarity=0.305  Sum_probs=18.0

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.+...|..|+++|+..
T Consensus        16 ~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A           16 GKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCcCchHHHHHHHHHhcCC
Confidence            89999999999999999653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=95.31  E-value=0.0045  Score=36.61  Aligned_cols=22  Identities=14%  Similarity=0.158  Sum_probs=17.9

Q ss_pred             CCCCCCchhhHhhhc-cCCCCCC
Q 043322          108 HTNMVRSLGVRAHSL-VHKPSRD  129 (187)
Q Consensus       108 gk~F~~~s~L~~H~r-iH~p~~~  129 (187)
                      ++.|.+...|..|++ +|+....
T Consensus        14 ~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A           14 GKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CCEESSHHHHHHHHHHSSCC---
T ss_pred             CcccCCHHHHHHHhhhhcCCCCC
Confidence            899999999999999 9976543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.20  E-value=0.0038  Score=34.02  Aligned_cols=20  Identities=15%  Similarity=0.114  Sum_probs=17.9

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.+...|..|+++|+..
T Consensus        16 ~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A           16 EYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCEESCHHHHHHHHHHSSTT
T ss_pred             CchhCCHHHHHHHHHHhccC
Confidence            89999999999999999653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.17  E-value=0.0021  Score=35.33  Aligned_cols=19  Identities=11%  Similarity=0.239  Sum_probs=17.2

Q ss_pred             CCCCCCc-hhhHhhhccCCC
Q 043322          108 HTNMVRS-LGVRAHSLVHKP  126 (187)
Q Consensus       108 gk~F~~~-s~L~~H~riH~p  126 (187)
                      ++.|.+. ..|..|+++|+.
T Consensus        16 ~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A           16 DFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             SCEECSSCHHHHHHHHHHHT
T ss_pred             ChhhccCHHHHHHHHHhcCC
Confidence            8999999 999999999964

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.15  E-value=0.0029  Score=43.01  Aligned_cols=18  Identities=11%  Similarity=0.313  Sum_probs=16.8

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ++.|.+...|..|+++|+
T Consensus        32 ~k~F~~~~~L~~H~~~Ht   49 (88)
T 1x6f_A           32 DSKLQSTAELTSHLNIHN   49 (88)
T ss_dssp             CCEESSHHHHHHHHHHHH
T ss_pred             CCEeCCHHHHHHHHHHhC
Confidence            899999999999999994

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.09  E-value=0.0037  Score=33.90  Aligned_cols=20  Identities=10%  Similarity=0.004  Sum_probs=17.8

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.....|..|+++|+..
T Consensus        16 ~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A           16 SYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCEESSHHHHHHHHHHHTCC
T ss_pred             CcccCCHHHHHHHHHHccCC
Confidence            89999999999999999653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.83  E-value=0.037  Score=35.63  Aligned_cols=21  Identities=14%  Similarity=0.147  Sum_probs=19.0

Q ss_pred             CCCCCCchhhHhhhccCCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPSR  128 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~~  128 (187)
                      ++.|.+...|..|+++|+...
T Consensus        20 gK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           20 GKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCccCCHHHHHhhhhhhCCCc
Confidence            899999999999999997653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.38  E-value=0.009  Score=32.40  Aligned_cols=20  Identities=15%  Similarity=0.174  Sum_probs=18.0

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.....|..|+++|+..
T Consensus        16 ~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A           16 NKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCEESSHHHHHHHHHHHCCC
T ss_pred             CceeCCHHHHHHHHHHhCCC
Confidence            89999999999999999654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=94.25  E-value=0.025  Score=29.40  Aligned_cols=20  Identities=20%  Similarity=0.235  Sum_probs=18.2

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      |+.|.+.+.|..|+++|++.
T Consensus        11 ~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A           11 GKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCSSHHHHHHHHTTTSCC
T ss_pred             CcccCCHhHHHHHHHHhcCC
Confidence            89999999999999999754

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.04  E-value=0.024  Score=34.27  Aligned_cols=28  Identities=29%  Similarity=0.323  Sum_probs=24.3

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      .+|.|+.|++.|.....|++|++.--++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            5789999999999999999999865443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=93.82  E-value=0.037  Score=27.47  Aligned_cols=19  Identities=26%  Similarity=0.382  Sum_probs=17.3

Q ss_pred             CCCCCCchhhHhhhccCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p  126 (187)
                      ++.|.+...|..|+++|+.
T Consensus         8 ~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            8 ERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CCBCSSHHHHHHHGGGTCC
T ss_pred             CCcCCCHHHHHHHHHHcCC
Confidence            8999999999999999964

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=93.79  E-value=0.008  Score=31.99  Aligned_cols=20  Identities=15%  Similarity=0.028  Sum_probs=17.1

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      |+.|.+.+.|..|+++|+..
T Consensus         9 ~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            9 PKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             CTTHHHHHTTSSSTTSSSSS
T ss_pred             CcccCCHHHHHHHHHHHccC
Confidence            88899999999999999543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=93.59  E-value=0.01  Score=32.61  Aligned_cols=20  Identities=20%  Similarity=0.109  Sum_probs=17.8

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.+.+.|..|+++|++.
T Consensus        17 ~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A           17 GKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCEESCHHHHHHHHHHHHTT
T ss_pred             CCccCCHHHHHHHHHhcCCC
Confidence            88999999999999999653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=93.42  E-value=0.04  Score=28.71  Aligned_cols=20  Identities=20%  Similarity=0.300  Sum_probs=18.0

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.+...|..|+++|+..
T Consensus        12 ~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A           12 DKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCCBSSSHHHHHHHGGGTCC
T ss_pred             CCccCCHHHHHHHHHHccCC
Confidence            89999999999999999653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=93.37  E-value=0.012  Score=32.29  Aligned_cols=20  Identities=10%  Similarity=0.097  Sum_probs=17.5

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.+...|..|+++|+..
T Consensus        15 ~k~f~~~~~L~~H~~~H~~~   34 (38)
T 1bhi_A           15 GQRFTNEDHLAVHKHKHEMT   34 (38)
T ss_dssp             CCEESSHHHHHHHHHHHHTT
T ss_pred             CcccCCHHHHHHHHHHhCCC
Confidence            78999999999999999543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=92.86  E-value=0.0094  Score=34.86  Aligned_cols=40  Identities=10%  Similarity=0.092  Sum_probs=27.4

Q ss_pred             HHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCC
Q 043322           78 GGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus        78 ~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~  127 (187)
                      ..|...|++++||...+.          ..++.|.+.+.|..|+++|+..
T Consensus         7 ~~~~~~H~~~k~~~C~~~----------~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFP----------GCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTEEECCCT----------TCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCCeECCCC----------CCCCccCCHHHHHHHHHHccCC
Confidence            344456777777632110          1288999999999999999654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=92.52  E-value=0.05  Score=27.29  Aligned_cols=20  Identities=15%  Similarity=0.199  Sum_probs=17.9

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.....|..|+++|++.
T Consensus         9 ~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            9 TRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCSSHHHHHHHHHHHSCC
T ss_pred             CcccCCHHHHHHHHHHhcCC
Confidence            89999999999999999653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=92.45  E-value=0.017  Score=32.71  Aligned_cols=24  Identities=4%  Similarity=0.041  Sum_probs=20.6

Q ss_pred             CCCCCcccccc-cCCCcCCCCcccc
Q 043322          145 GMAWTPYVLEE-ATDVMWPGSFRVN  168 (187)
Q Consensus       145 ~~~~~p~~~~~-~~~~~wp~s~~~~  168 (187)
                      .++++||.|++ +++|.+..+|+..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H   27 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAH   27 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCc
Confidence            47899999999 8999998887654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=92.05  E-value=0.039  Score=27.81  Aligned_cols=20  Identities=25%  Similarity=0.348  Sum_probs=17.7

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.....|..|+++|++.
T Consensus         9 ~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            9 PKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             SCEESCSHHHHHHHTGGGSC
T ss_pred             CchhCCHHHHHHHHHHhcCC
Confidence            88999999999999999653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=91.28  E-value=0.028  Score=28.53  Aligned_cols=20  Identities=15%  Similarity=0.147  Sum_probs=17.6

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.....|..|+++|++.
T Consensus         9 ~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            9 GKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            88999999999999999643

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=91.99  E-value=0.047  Score=27.26  Aligned_cols=20  Identities=15%  Similarity=0.230  Sum_probs=17.6

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.....|..|+++|...
T Consensus         9 ~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            9 DKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCTTTHHHHHHHHHHSC
T ss_pred             CcccCCHHHHHHHHHHhccC
Confidence            88999999999999998543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=91.56  E-value=0.086  Score=26.44  Aligned_cols=20  Identities=10%  Similarity=0.107  Sum_probs=17.8

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.....|..|+++|.+.
T Consensus         9 ~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            9 EFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             SCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCHHHHHHHHHHHccC
Confidence            88999999999999999654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=91.50  E-value=0.13  Score=25.85  Aligned_cols=20  Identities=15%  Similarity=0.165  Sum_probs=17.6

Q ss_pred             CCCCCCchhhHhh-hccCCCC
Q 043322          108 HTNMVRSLGVRAH-SLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H-~riH~p~  127 (187)
                      ++.|.+...|..| +++|+..
T Consensus         9 ~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            9 NRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcccCChHHHHHHHHHHccCC
Confidence            8999999999999 7999653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=91.39  E-value=0.073  Score=26.74  Aligned_cols=20  Identities=10%  Similarity=0.057  Sum_probs=17.9

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      ++.|.....|..|+++|.+.
T Consensus        10 ~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A           10 GRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEESCHHHHHHHHHTTCCC
T ss_pred             CcccCCHHHHHHHHHHhccC
Confidence            88999999999999999654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.63  E-value=0.18  Score=28.27  Aligned_cols=25  Identities=32%  Similarity=0.505  Sum_probs=21.7

Q ss_pred             ccccCcccccccCchhHHHHH-hhhc
Q 043322           61 VFSCNFCMRKFFSSQALGGHQ-NAHK   85 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~-~~H~   85 (187)
                      .|.|++|.+.|.+...|..|- ..|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            489999999999999999995 4564

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=89.46  E-value=0.031  Score=35.68  Aligned_cols=22  Identities=23%  Similarity=0.215  Sum_probs=12.5

Q ss_pred             ccccccCchhHHHHH-hhhcCCC
Q 043322           67 CMRKFFSSQALGGHQ-NAHKRER   88 (187)
Q Consensus        67 Cgk~F~~~~~L~~H~-~~H~gek   88 (187)
                      |++.|.+...|..|+ +.|.+.+
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~   31 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQD   31 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcc
Confidence            566666666666665 3455443

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=84.50  E-value=0.37  Score=32.78  Aligned_cols=28  Identities=25%  Similarity=0.312  Sum_probs=22.3

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      .-..|-+||+.|..   |.+|++.|.|..|.
T Consensus        20 d~iiClecGK~fK~---LkRHL~~~hgltpe   47 (87)
T 2jsp_A           20 DHIVCLECGGSFKS---LKRHLTTHHSMTPE   47 (87)
T ss_dssp             SCEECTBTCCEESB---HHHHHHHTTCSCHH
T ss_pred             CceEecccchhhHH---HHHHHHHccCCCHH
Confidence            34579999999984   88999997776654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	187
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-13

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 59.3 bits (144), Expect = 2e-13
 Identities = 16/33 (48%), Positives = 25/33 (75%)

Query: 60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGAAK 92
          + ++C+FC R+F S+QALGGH N H+R+R   +
Sbjct: 4  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	187
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.35
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.34
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.33
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.24
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.19
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.16
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.13
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.12
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.11
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.09
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.05
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.02
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.97
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.84
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.81
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.8
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.6
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.59
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.58
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.52
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.27
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.18
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.05
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.88
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.83
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	97.82
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.8
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.8
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.75
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.75
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.69
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.69
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	97.55
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.53
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.44
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.43
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.38
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.34
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.33
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.16
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.15
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.14
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.05
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.05
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.93
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	96.89
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.84
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	96.77
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.68
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.67
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	96.48
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.38
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.13
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.11
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.02
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.0
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.74
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.42
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	95.34
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.27
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.24
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.24
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.37
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.92
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.52
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.59
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.74
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.54
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	91.33
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	91.33
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	91.02
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	89.88
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.46
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	89.37
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.36
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.16
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.45
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	87.06
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	86.79
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	83.59
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	82.99
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	80.74
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	80.51

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.6e-13  Score=77.03  Aligned_cols=33  Identities=30%  Similarity=0.431  Sum_probs=31.9

Q ss_pred             CCCCCCccccCcccccccCchhHHHHHhhhcCC
Q 043322           55 RPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        55 ~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      +|+|+|||+|.+|||+|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.1e-13  Score=84.73  Aligned_cols=53  Identities=17%  Similarity=0.272  Sum_probs=46.6

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVH  124 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH  124 (187)
                      ||||.|. ||+.|.....|..|+++|+|++||....            .|++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~------------C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGV------------CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTT------------TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCC------------cCCEecCHHHHHHHHhcC
Confidence            6899995 9999999999999999999999973222            288999999999999998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.1e-13  Score=78.45  Aligned_cols=34  Identities=24%  Similarity=0.489  Sum_probs=33.1

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      ++|+++|||.|++|||.|...+.|..|+++|+||
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            7899999999999999999999999999999997

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.6e-12  Score=74.46  Aligned_cols=34  Identities=24%  Similarity=0.375  Sum_probs=32.4

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcCC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      |+|+|+|||+|.+||++|..++.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            6899999999999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=5.2e-12  Score=72.72  Aligned_cols=33  Identities=33%  Similarity=0.444  Sum_probs=31.5

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHhhhcC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      |+|+|+|||.|++|+++|..++.|..|+++|.+
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            789999999999999999999999999999964

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=7.2e-12  Score=71.06  Aligned_cols=33  Identities=18%  Similarity=0.471  Sum_probs=31.0

Q ss_pred             CCCCCccccCcccccccCchhHHHHHhhhcCCC
Q 043322           56 PTTAKVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        56 Htgekpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      |+|+|||.|.+|+|.|..+..|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            799999999999999999999999999998753

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.13  E-value=5e-12  Score=76.52  Aligned_cols=42  Identities=24%  Similarity=0.478  Sum_probs=38.0

Q ss_pred             CCCCCCCCCCCCCCccccCc--ccccccCchhHHHHHhhhcCCC
Q 043322           47 SRDPDSPARPTTAKVFSCNF--CMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        47 ~~~L~~h~~Htgekpf~C~~--Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      ++.|..|..|++++||.|.+  |+|.|..++.|..|+++|+|||
T Consensus         4 ~~~l~~h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhhccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            35567787899999999988  9999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.12  E-value=1e-11  Score=67.55  Aligned_cols=29  Identities=31%  Similarity=0.705  Sum_probs=28.0

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      |||.|++|+|.|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.5e-11  Score=66.81  Aligned_cols=29  Identities=31%  Similarity=0.713  Sum_probs=28.0

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      |||.|++|+|.|..++.|..|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.1e-11  Score=70.81  Aligned_cols=34  Identities=29%  Similarity=0.551  Sum_probs=31.3

Q ss_pred             CCCccccCcccccccCchhHHHHHh-hhcCCCCCc
Q 043322           58 TAKVFSCNFCMRKFFSSQALGGHQN-AHKRERGAA   91 (187)
Q Consensus        58 gekpf~C~~Cgk~F~~~~~L~~H~~-~H~gekp~~   91 (187)
                      .+|||.|.+|||.|..+..|..|++ +|+|||||.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~   36 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK   36 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcC
Confidence            4799999999999999999999975 799999983

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.1e-11  Score=69.60  Aligned_cols=33  Identities=21%  Similarity=0.413  Sum_probs=29.5

Q ss_pred             CCCCCCCccccCcccccccCchhHHHHHh-hhcC
Q 043322           54 ARPTTAKVFSCNFCMRKFFSSQALGGHQN-AHKR   86 (187)
Q Consensus        54 ~~Htgekpf~C~~Cgk~F~~~~~L~~H~~-~H~g   86 (187)
                      ++|+|+|||.|++|++.|..+..|..|++ .|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            58999999999999999999999999975 4543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=2.2e-11  Score=65.62  Aligned_cols=28  Identities=39%  Similarity=0.723  Sum_probs=27.0

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      ||||.|.+|+|.|..+..|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=4.1e-12  Score=78.73  Aligned_cols=50  Identities=22%  Similarity=0.407  Sum_probs=45.3

Q ss_pred             cceeeccCCCCCCCCCCCCCC-CCCCCCCccccCcccccccCchhHHHHHhhh
Q 043322           33 EWLNLKLGGNSLSTSRDPDSP-ARPTTAKVFSCNFCMRKFFSSQALGGHQNAH   84 (187)
Q Consensus        33 ~~l~l~~~~~sF~~~~~L~~h-~~Htgekpf~C~~Cgk~F~~~~~L~~H~~~H   84 (187)
                      .|-+ . .|++|.....|..| ++|++++||.|.+||+.|.....|..|+++|
T Consensus         3 ~y~C-~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           3 LYPC-Q-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CEEC-T-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCC-C-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3455 5 78899999999998 7899999999999999999999999999987

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=6.8e-11  Score=62.32  Aligned_cols=26  Identities=31%  Similarity=0.535  Sum_probs=25.0

Q ss_pred             CccccCcccccccCchhHHHHHhhhc
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      |||+|++|||.|..++.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999995

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=6.2e-10  Score=60.69  Aligned_cols=28  Identities=29%  Similarity=0.604  Sum_probs=26.9

Q ss_pred             CccccCc--ccccccCchhHHHHHhhhcCC
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      |||.|++  |+|+|..++.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999999  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=8.8e-10  Score=60.60  Aligned_cols=29  Identities=31%  Similarity=0.764  Sum_probs=27.1

Q ss_pred             CccccC--cccccccCchhHHHHHhhhcCCC
Q 043322           60 KVFSCN--FCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        60 kpf~C~--~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      |||.|+  .|+|.|..++.|..|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            699996  59999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=6.6e-10  Score=60.62  Aligned_cols=28  Identities=32%  Similarity=0.648  Sum_probs=26.7

Q ss_pred             CccccCc--ccccccCchhHHHHHhhhcCC
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      |||.|++  |+|+|..++.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999988  999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=6.3e-09  Score=59.02  Aligned_cols=30  Identities=30%  Similarity=0.476  Sum_probs=28.2

Q ss_pred             cccCc--ccccccCchhHHHHHhhhcCCCCCc
Q 043322           62 FSCNF--CMRKFFSSQALGGHQNAHKRERGAA   91 (187)
Q Consensus        62 f~C~~--Cgk~F~~~~~L~~H~~~H~gekp~~   91 (187)
                      |.|+.  |+|.|..+..|.+|+++|+|+|||.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~   33 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   33 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEe
Confidence            78887  9999999999999999999999984

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=5.5e-09  Score=56.38  Aligned_cols=27  Identities=30%  Similarity=0.618  Sum_probs=25.7

Q ss_pred             CccccCc--ccccccCchhHHHHHhhhcC
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      |||.|++  |+|+|..+..|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999988  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.58  E-value=1.7e-08  Score=55.64  Aligned_cols=29  Identities=24%  Similarity=0.667  Sum_probs=27.0

Q ss_pred             CCccccCc--ccccccCchhHHHHHhhhcCC
Q 043322           59 AKVFSCNF--CMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        59 ekpf~C~~--Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      ||||.|++  |+|+|..+..|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999853

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=1.7e-08  Score=53.83  Aligned_cols=26  Identities=35%  Similarity=0.708  Sum_probs=24.7

Q ss_pred             CccccCc--ccccccCchhHHHHHhhhc
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~~~H~   85 (187)
                      |||.|++  |||+|..+..|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999998  9999999999999999996

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=7.5e-08  Score=50.02  Aligned_cols=27  Identities=37%  Similarity=0.658  Sum_probs=25.5

Q ss_pred             CCccccCcccccccCchhHHHHHhhhc
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      |+||.|++||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.6e-07  Score=50.68  Aligned_cols=31  Identities=26%  Similarity=0.456  Sum_probs=29.0

Q ss_pred             CccccCcccccccCchhHHHHHhhhcCCCCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHKRERGA   90 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~gekp~   90 (187)
                      +...|..|||.|.....|.+|...|++||||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4568999999999999999999999999998

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.27  E-value=1.8e-07  Score=52.60  Aligned_cols=31  Identities=52%  Similarity=1.113  Sum_probs=27.9

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCCCC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRERG   89 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~gekp   89 (187)
                      .+.|.|.+|+|.|.+.++|..|++.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            4679999999999999999999999987653

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=3.5e-07  Score=46.94  Aligned_cols=27  Identities=37%  Similarity=0.564  Sum_probs=25.0

Q ss_pred             ccccCcccccccCchhHHHHHhhhcCC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      .+.|.+|||+|..++.|.+|+.+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            467999999999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=9.3e-07  Score=44.47  Aligned_cols=26  Identities=23%  Similarity=0.461  Sum_probs=24.4

Q ss_pred             ccccCcccccccCchhHHHHHhhhcC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      |++|+.|+|.|..+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=2.8e-06  Score=43.75  Aligned_cols=29  Identities=24%  Similarity=0.442  Sum_probs=27.1

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      ++||+|..|...-..++.|..|.+.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999974

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=3.6e-06  Score=44.25  Aligned_cols=29  Identities=24%  Similarity=0.490  Sum_probs=27.0

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      ++||+|++|+..|..+..+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=2.7e-06  Score=48.32  Aligned_cols=37  Identities=11%  Similarity=0.067  Sum_probs=27.6

Q ss_pred             HHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCC
Q 043322           79 GHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus        79 ~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~  127 (187)
                      +|+++|+++|||....            .||+|.+.+.|..|+++|+++
T Consensus         2 rH~~~Ht~ekpy~C~~------------CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE------------CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS------------SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC------------CCceeeCHHHHHHhCccCCCC
Confidence            4666677777662221            299999999999999999763

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=1.8e-06  Score=47.52  Aligned_cols=26  Identities=27%  Similarity=0.230  Sum_probs=21.9

Q ss_pred             hhcCC-CC-----CCCCCCchhhHhhhccCCC
Q 043322          101 TMMGL-PV-----HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       101 ~Htge-p~-----gk~F~~~s~L~~H~riH~p  126 (187)
                      +|+|+ ||     |++|.+.+.|..|+++|++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            35566 55     9999999999999999975

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=6e-06  Score=42.59  Aligned_cols=27  Identities=22%  Similarity=0.370  Sum_probs=25.7

Q ss_pred             cccCcccccccCchhHHHHHhhhcCCC
Q 043322           62 FSCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        62 f~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      |.|++||......+-|..|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999975

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=3.9e-06  Score=47.93  Aligned_cols=26  Identities=19%  Similarity=0.174  Sum_probs=23.4

Q ss_pred             CCCCCCchhhHhhhc-cCCCCCCCCCCccCCCCCCCCCCCCCCccccc
Q 043322          108 HTNMVRSLGVRAHSL-VHKPSRDGAGVGARFNDADTGFGMAWTPYVLE  154 (187)
Q Consensus       108 gk~F~~~s~L~~H~r-iH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~  154 (187)
                      |++|.+++.|..|++ +|                     +|++||.|+
T Consensus        12 gk~F~~~~~L~~H~r~~H---------------------t~ekpy~C~   38 (39)
T d2epsa1          12 GKGFSRPDHLNGHIKQVH---------------------TSERPHKCQ   38 (39)
T ss_dssp             CCEESSHHHHHHHHHHTS---------------------CCCCCCCSS
T ss_pred             CCCcCChHHhhccCcCcc---------------------CCCcCcCCc
Confidence            999999999999975 78                     888999986

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.75  E-value=7.4e-06  Score=40.74  Aligned_cols=24  Identities=42%  Similarity=0.904  Sum_probs=22.8

Q ss_pred             cccCcccccccCchhHHHHHhhhc
Q 043322           62 FSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        62 f~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      |+|..|.+.|..+++|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=3.3e-06  Score=47.36  Aligned_cols=27  Identities=15%  Similarity=0.039  Sum_probs=22.2

Q ss_pred             HhhcCC-CC-----CCCCCCchhhHhhhccCCC
Q 043322          100 MTMMGL-PV-----HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       100 r~Htge-p~-----gk~F~~~s~L~~H~riH~p  126 (187)
                      |+|+|+ ||     |++|.+++.|..|+++|+.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            355666 55     9999999999999999964

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=2.6e-06  Score=47.85  Aligned_cols=26  Identities=15%  Similarity=0.183  Sum_probs=23.8

Q ss_pred             CCCCCCchhhHhhhccCCCCCCCCCCccCCCCCCCCCCCCCCccccc
Q 043322          108 HTNMVRSLGVRAHSLVHKPSRDGAGVGARFNDADTGFGMAWTPYVLE  154 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~~~~~~~~~~f~~~~~~~~~~~~p~~~~  154 (187)
                      |+.|.++..|++|+++|                     +|++||.|+
T Consensus        10 ~k~F~~~~~L~~H~r~H---------------------tgekpy~C~   35 (36)
T d2dlka2          10 GKSFNFKKHLKEHMKLH---------------------SDTRDYICE   35 (36)
T ss_dssp             CCEESSHHHHHHHHHHH---------------------HTSCCCSCC
T ss_pred             CCeeCChhHhccccCee---------------------CCCCCEeCC
Confidence            89999999999999999                     778888885

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=8.9e-06  Score=45.80  Aligned_cols=34  Identities=12%  Similarity=-0.013  Sum_probs=25.4

Q ss_pred             HHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCC
Q 043322           80 HQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus        80 H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~  125 (187)
                      |.|+|+|||||....            .+++|.+++.|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~------------C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD------------CDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTT------------TCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCC------------CCCEecCHHHHHHHHhcCc
Confidence            556666666662221            1899999999999999994

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=2.4e-05  Score=39.41  Aligned_cols=26  Identities=35%  Similarity=0.637  Sum_probs=24.7

Q ss_pred             ccCcccccccCchhHHHHHhhhcCCC
Q 043322           63 SCNFCMRKFFSSQALGGHQNAHKRER   88 (187)
Q Consensus        63 ~C~~Cgk~F~~~~~L~~H~~~H~gek   88 (187)
                      +|+.|.|.|.++..|..|-+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999986

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=2.9e-05  Score=40.94  Aligned_cols=28  Identities=29%  Similarity=0.628  Sum_probs=24.9

Q ss_pred             CccccCc--ccccccCchhHHHHH-hhhcCC
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQ-NAHKRE   87 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~-~~H~ge   87 (187)
                      |||.|.+  |.|+|.+++.-..|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6999998  999999999999998 788653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=2.7e-05  Score=43.99  Aligned_cols=26  Identities=27%  Similarity=0.660  Sum_probs=23.8

Q ss_pred             CCCCccccCcccccccCchhHHHHHh
Q 043322           57 TTAKVFSCNFCMRKFFSSQALGGHQN   82 (187)
Q Consensus        57 tgekpf~C~~Cgk~F~~~~~L~~H~~   82 (187)
                      +|-|||.|..|+|.|-...++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57899999999999999999999964

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.38  E-value=2.1e-05  Score=43.69  Aligned_cols=26  Identities=19%  Similarity=0.262  Sum_probs=21.5

Q ss_pred             hcCC-CC-----CCCCCCchhhHhhhccCCCC
Q 043322          102 MMGL-PV-----HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       102 Htge-p~-----gk~F~~~s~L~~H~riH~p~  127 (187)
                      |+|+ ||     ++.|.+++.|.+|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            4555 55     99999999999999999654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.34  E-value=4.7e-05  Score=39.31  Aligned_cols=28  Identities=36%  Similarity=0.572  Sum_probs=25.7

Q ss_pred             CccccCc--ccccccCchhHHHHHhhhcCC
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      +||.|.+  |.|.|.+...|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            6899987  999999999999999999886

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=5.4e-05  Score=38.48  Aligned_cols=27  Identities=26%  Similarity=0.443  Sum_probs=25.2

Q ss_pred             CCccccCcccccccCchhHHHHHhhhc
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      .+||+|..|...-..+++|..|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            379999999999999999999999986

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.16  E-value=6.4e-05  Score=39.60  Aligned_cols=26  Identities=27%  Similarity=0.574  Sum_probs=23.1

Q ss_pred             ccccCcccccccCchhHHHHH-hhhcC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQ-NAHKR   86 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~-~~H~g   86 (187)
                      ||.|.+|++.|....-|.+|+ +.|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999995 46765

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00016  Score=37.31  Aligned_cols=28  Identities=29%  Similarity=0.619  Sum_probs=24.4

Q ss_pred             CccccCcccccccCchhHHHHHhh-hcCC
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNA-HKRE   87 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~-H~ge   87 (187)
                      +||.|.+|......+++|..|+++ |..|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            699999999999999999999876 5444

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=9.6e-05  Score=38.52  Aligned_cols=27  Identities=19%  Similarity=0.576  Sum_probs=24.0

Q ss_pred             CccccCc--ccccccCchhHHHHHhhhcC
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      |||.|..  |+|++...++|+.|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899988  99999999999999987554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00012  Score=38.71  Aligned_cols=20  Identities=20%  Similarity=0.235  Sum_probs=18.8

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      |++|.+++.|..|+++|++.
T Consensus         9 ~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           9 PKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             TCCCSCSHHHHHHHHGGGCC
T ss_pred             CCeecchHHhhhhcCccCCc
Confidence            99999999999999999765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.05  E-value=0.00011  Score=38.86  Aligned_cols=21  Identities=14%  Similarity=0.232  Sum_probs=19.1

Q ss_pred             CCCCCCchhhHhhhccCCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPSR  128 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~~  128 (187)
                      |++|.+++.|..|+++|++++
T Consensus         9 ~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           9 TRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBSCHHHHHHHHHTTTSSC
T ss_pred             CCCCCCchHcccccCcccCCC
Confidence            999999999999999997653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.93  E-value=0.00019  Score=36.78  Aligned_cols=25  Identities=24%  Similarity=0.592  Sum_probs=23.0

Q ss_pred             CccccCc--ccccccCchhHHHHHhhh
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQNAH   84 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~~~H   84 (187)
                      .||.|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899986  999999999999999987

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00026  Score=37.96  Aligned_cols=20  Identities=20%  Similarity=0.235  Sum_probs=18.8

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      |++|.+++.|..|+++|++.
T Consensus        11 ~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_          11 GKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCcCChhHhhhhcCccccc
Confidence            89999999999999999765

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.00033  Score=35.91  Aligned_cols=29  Identities=31%  Similarity=0.581  Sum_probs=26.8

Q ss_pred             CCccccCcccccccCchhHHHHHhhhcCC
Q 043322           59 AKVFSCNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        59 ekpf~C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      +..|.|..|...|...-.|+.|+-.|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=7.3e-05  Score=41.62  Aligned_cols=24  Identities=33%  Similarity=0.458  Sum_probs=18.7

Q ss_pred             hhcCC-CC-----CCCCCCchhhHhhhc-cC
Q 043322          101 TMMGL-PV-----HTNMVRSLGVRAHSL-VH  124 (187)
Q Consensus       101 ~Htge-p~-----gk~F~~~s~L~~H~r-iH  124 (187)
                      +|+|+ ||     +++|.++..|+.|++ .|
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            45555 55     999999999999975 55

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00038  Score=37.03  Aligned_cols=20  Identities=15%  Similarity=0.187  Sum_probs=18.5

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      |++|.+++.|+.|+++|+++
T Consensus        11 gk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3          11 RKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCSSHHHHHHHHHHTTTC
T ss_pred             CceECChhHhhhhcCcCcCC
Confidence            89999999999999999763

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.67  E-value=8.8e-05  Score=38.98  Aligned_cols=19  Identities=26%  Similarity=0.232  Sum_probs=17.6

Q ss_pred             CCCCCCchhhHhhhccCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p  126 (187)
                      +++|.+++.|..|+++|++
T Consensus        10 ~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2          10 MRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEESCHHHHHHHHHHHHC
T ss_pred             cCEecccccccccCCCccC
Confidence            8999999999999999964

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.00011  Score=37.85  Aligned_cols=18  Identities=17%  Similarity=0.338  Sum_probs=17.1

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ||+|.+++.|..|+|||+
T Consensus         9 gK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           9 GKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEESSHHHHHHHHHHHH
T ss_pred             cCeeccCcccccCccCCC
Confidence            999999999999999984

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.38  E-value=0.00019  Score=42.23  Aligned_cols=43  Identities=12%  Similarity=0.177  Sum_probs=30.7

Q ss_pred             hhHHHHHhhhcCCCCCcccccchhhHhhcCCCCCCCCCCchhhHhhhccCCCCC
Q 043322           75 QALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHSLVHKPSR  128 (187)
Q Consensus        75 ~~L~~H~~~H~gekp~~f~~~s~l~r~Htgep~gk~F~~~s~L~~H~riH~p~~  128 (187)
                      ..|..|+. |+|+|||...+.          ..++.|.+++.|..|+++|++.+
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~----------~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFP----------GCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCT----------TCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcC----------CCCccccCchHHHhhcccccCCC
Confidence            34566664 888888732220          13899999999999999997653

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.00075  Score=35.24  Aligned_cols=18  Identities=22%  Similarity=0.482  Sum_probs=17.1

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      ||+|.+++.|++|+++|+
T Consensus        11 ~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4          11 NKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCHHHHHHHHhhcc
Confidence            999999999999999995

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.0003  Score=37.47  Aligned_cols=19  Identities=16%  Similarity=0.314  Sum_probs=17.9

Q ss_pred             CCCCCCchhhHhhhccCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p  126 (187)
                      |++|.+++.|..|+|+|++
T Consensus        11 gk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3          11 GKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEESCHHHHHHHHHHHHC
T ss_pred             CceECcHHHcCccccccCC
Confidence            8999999999999999975

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.02  E-value=0.0014  Score=35.18  Aligned_cols=20  Identities=20%  Similarity=0.300  Sum_probs=18.4

Q ss_pred             CCCCCCchhhHhhhccCCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKPS  127 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p~  127 (187)
                      +++|.+++.|.+|+++|++.
T Consensus        12 ~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_          12 DKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCCBSSSHHHHHHHGGGTCC
T ss_pred             CCeeCCHHHHHHHhhhccCC
Confidence            89999999999999999753

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0013  Score=33.62  Aligned_cols=23  Identities=22%  Similarity=0.567  Sum_probs=21.5

Q ss_pred             ccccCcccccccCchhHHHHHhh
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      ||.|..|.-.|.++.+|..|+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.74  E-value=0.0022  Score=32.86  Aligned_cols=24  Identities=25%  Similarity=0.549  Sum_probs=21.8

Q ss_pred             CccccCcccccccCchhHHHHHhh
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      +||+|.+|.---.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            699999999999999999999764

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.42  E-value=0.0038  Score=31.33  Aligned_cols=22  Identities=27%  Similarity=0.609  Sum_probs=20.3

Q ss_pred             ccccCcccccccCchhHHHHHh
Q 043322           61 VFSCNFCMRKFFSSQALGGHQN   82 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~   82 (187)
                      ||+|..|||.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999964

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.34  E-value=0.00078  Score=35.46  Aligned_cols=19  Identities=21%  Similarity=0.309  Sum_probs=17.6

Q ss_pred             CCCCCCchhhHhhhccCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p  126 (187)
                      +++|.+++.|.+|+++|++
T Consensus        11 ~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1          11 DRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEESSHHHHHHHTHHHHT
T ss_pred             CcEECchhHhhhhcCccCC
Confidence            8999999999999999963

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.0042  Score=31.33  Aligned_cols=26  Identities=27%  Similarity=0.270  Sum_probs=23.4

Q ss_pred             ccccCcccccccCchhHHHHHhhhcC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      |-+|..|.....++.+|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56899999999999999999999853

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0038  Score=36.15  Aligned_cols=26  Identities=23%  Similarity=0.614  Sum_probs=23.3

Q ss_pred             CccccCcccccccCchhHHHHHhhhc
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      -.|.|..|+|.|.....|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35889999999999999999988774

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0048  Score=33.92  Aligned_cols=28  Identities=29%  Similarity=0.552  Sum_probs=24.5

Q ss_pred             CCCcccc--CcccccccCchhHHHHHhhhc
Q 043322           58 TAKVFSC--NFCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        58 gekpf~C--~~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      .+|||.|  +-|+.+|.+...|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4799999  559999999999999988774

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.37  E-value=0.0082  Score=29.38  Aligned_cols=22  Identities=23%  Similarity=0.634  Sum_probs=20.4

Q ss_pred             ccccCcccccccCchhHHHHHh
Q 043322           61 VFSCNFCMRKFFSSQALGGHQN   82 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~   82 (187)
                      ||+|.-|...|..+..|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999964

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.01  Score=29.87  Aligned_cols=20  Identities=30%  Similarity=0.414  Sum_probs=18.3

Q ss_pred             CCCCCCCchhhHhhhccCCC
Q 043322          107 VHTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       107 ~gk~F~~~s~L~~H~riH~p  126 (187)
                      .||+|..++.|++|+.+|++
T Consensus         8 cgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           8 CGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             TCCEESSHHHHHHHGGGTSC
T ss_pred             HhHHHHHHHHHHHHhhcccC
Confidence            38999999999999999975

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.52  E-value=0.015  Score=31.08  Aligned_cols=24  Identities=29%  Similarity=0.369  Sum_probs=19.1

Q ss_pred             cCcccccccCchhHHHHHhhhcCC
Q 043322           64 CNFCMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        64 C~~Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      |.-=++.|.....|..|+|+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333446799999999999999986

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.59  E-value=0.028  Score=29.90  Aligned_cols=26  Identities=19%  Similarity=0.501  Sum_probs=22.4

Q ss_pred             ccccCcccccccCchhHHHHHhhhcC
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      .|.|..|||.|.....+.+|--..+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58999999999999999999765554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.74  E-value=0.032  Score=27.72  Aligned_cols=24  Identities=33%  Similarity=0.703  Sum_probs=20.3

Q ss_pred             cccCc--ccccccCchhHHHHHhhhc
Q 043322           62 FSCNF--CMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        62 f~C~~--Cgk~F~~~~~L~~H~~~H~   85 (187)
                      |.|..  |+|.|.....|..|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            55654  9999999999999998875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.057  Score=26.50  Aligned_cols=19  Identities=16%  Similarity=0.163  Sum_probs=17.6

Q ss_pred             CCCCCCchhhHhhhccCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p  126 (187)
                      +|.|.++..|+.|+|.|++
T Consensus         8 ~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           8 GKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             TBCCCCHHHHHHHGGGCCC
T ss_pred             hhHhcchhHHHHHhhccCC
Confidence            8999999999999999964

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=91.33  E-value=0.054  Score=26.34  Aligned_cols=18  Identities=28%  Similarity=0.420  Sum_probs=16.3

Q ss_pred             CCCCCCchhhHhhhccCC
Q 043322          108 HTNMVRSLGVRAHSLVHK  125 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~  125 (187)
                      .++|..++.|.+|+++|+
T Consensus         7 ersfveksalsrhqrvhk   24 (26)
T d1znfa_           7 ERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CCBCSSHHHHHHHGGGTC
T ss_pred             HHHHHHHHHHHHHHHhhc
Confidence            578999999999999996

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.33  E-value=0.0095  Score=33.24  Aligned_cols=23  Identities=30%  Similarity=0.543  Sum_probs=19.7

Q ss_pred             CCCCcccccc-cCCCcCCCCcccc
Q 043322          146 MAWTPYVLEE-ATDVMWPGSFRVN  168 (187)
Q Consensus       146 ~~~~p~~~~~-~~~~~wp~s~~~~  168 (187)
                      +|-+||.|.. ++.|.|-.||...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH   24 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHh
Confidence            4679999999 8999999998754

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.02  E-value=0.048  Score=26.60  Aligned_cols=23  Identities=26%  Similarity=0.804  Sum_probs=20.5

Q ss_pred             ccccCcccccccCchhHHHHHhh
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      .|.|+.|-|.|..+.++..|.++
T Consensus         1 vypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCchhhHHhccccCceEEEEE
Confidence            37899999999999999999764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.88  E-value=0.056  Score=28.42  Aligned_cols=20  Identities=15%  Similarity=0.134  Sum_probs=17.2

Q ss_pred             CCCCCCCchhhHhhhccCCC
Q 043322          107 VHTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       107 ~gk~F~~~s~L~~H~riH~p  126 (187)
                      .||.|.....|.+|...|..
T Consensus        11 cgk~frdvyhlnrhklshs~   30 (35)
T d2epra1          11 CGKIFRDVYHLNRHKLSHSG   30 (35)
T ss_dssp             TTEEESSHHHHHHHGGGSCS
T ss_pred             HHHHHHHHHHHHhhhcccCC
Confidence            48999999999999999933

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.46  E-value=0.074  Score=27.94  Aligned_cols=22  Identities=36%  Similarity=0.504  Sum_probs=20.3

Q ss_pred             ccccCcccccccCchhHHHHHh
Q 043322           61 VFSCNFCMRKFFSSQALGGHQN   82 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~   82 (187)
                      .|.|.-||-.|.+.+.|..||.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4889999999999999999985

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.37  E-value=0.079  Score=26.39  Aligned_cols=23  Identities=26%  Similarity=0.469  Sum_probs=20.6

Q ss_pred             ccccCcccccccCchhHHHHHhh
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      .|.|+.|+-....++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            47899999999999999999864

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.36  E-value=0.15  Score=25.77  Aligned_cols=23  Identities=26%  Similarity=0.530  Sum_probs=20.2

Q ss_pred             ccccCcccccccCchhHHHHHhh
Q 043322           61 VFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        61 pf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      .|.|..|||...+...+..|...
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            48899999999999999999654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.16  E-value=0.093  Score=26.93  Aligned_cols=28  Identities=29%  Similarity=0.571  Sum_probs=24.1

Q ss_pred             CccccCc--ccccccCchhHHHHHhhhcCC
Q 043322           60 KVFSCNF--CMRKFFSSQALGGHQNAHKRE   87 (187)
Q Consensus        60 kpf~C~~--Cgk~F~~~~~L~~H~~~H~ge   87 (187)
                      |.|.|.+  |+-.|.....|..|.-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577765  999999999999999999986

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.45  E-value=0.11  Score=25.96  Aligned_cols=20  Identities=25%  Similarity=0.444  Sum_probs=17.5

Q ss_pred             cccccccCchhHHHHHhhhc
Q 043322           66 FCMRKFFSSQALGGHQNAHK   85 (187)
Q Consensus        66 ~Cgk~F~~~~~L~~H~~~H~   85 (187)
                      -|.|.|...++++.|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            39999999999999988774

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.06  E-value=0.067  Score=28.43  Aligned_cols=19  Identities=11%  Similarity=-0.036  Sum_probs=15.7

Q ss_pred             CCCCCCchhhHhhhccCCC
Q 043322          108 HTNMVRSLGVRAHSLVHKP  126 (187)
Q Consensus       108 gk~F~~~s~L~~H~riH~p  126 (187)
                      ++.|.....|..|+|+|++
T Consensus        14 ~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHC
T ss_pred             CCcchhHHHHHHHHhhcCC
Confidence            6778888888899988865

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.79  E-value=0.22  Score=28.37  Aligned_cols=27  Identities=19%  Similarity=0.353  Sum_probs=23.8

Q ss_pred             CCCCccccCcccccccCchhHHHHHhh
Q 043322           57 TTAKVFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        57 tgekpf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      ..+.|-.|++|+....++.+|++|...
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            347789999999999999999999764

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.59  E-value=0.24  Score=24.84  Aligned_cols=18  Identities=33%  Similarity=0.394  Sum_probs=15.7

Q ss_pred             CcccccccCchhHHHHHh
Q 043322           65 NFCMRKFFSSQALGGHQN   82 (187)
Q Consensus        65 ~~Cgk~F~~~~~L~~H~~   82 (187)
                      +-|||.|.+.+.|.-|.+
T Consensus         6 ~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTTCCEESSHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHH
Confidence            359999999999998875

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.99  E-value=0.14  Score=31.61  Aligned_cols=23  Identities=30%  Similarity=0.521  Sum_probs=20.8

Q ss_pred             CccccCcccccccCchhHHHHHh
Q 043322           60 KVFSCNFCMRKFFSSQALGGHQN   82 (187)
Q Consensus        60 kpf~C~~Cgk~F~~~~~L~~H~~   82 (187)
                      ..|-|..|.|.|.+...|..|++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            45889999999999999999976

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=80.74  E-value=0.27  Score=26.00  Aligned_cols=26  Identities=15%  Similarity=0.416  Sum_probs=22.2

Q ss_pred             CCCccccCcccccccCchhHHHHHhh
Q 043322           58 TAKVFSCNFCMRKFFSSQALGGHQNA   83 (187)
Q Consensus        58 gekpf~C~~Cgk~F~~~~~L~~H~~~   83 (187)
                      |+..|.|..|.+.+..-+++-+|--+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            45679999999999999999999543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.51  E-value=0.34  Score=29.52  Aligned_cols=29  Identities=28%  Similarity=0.571  Sum_probs=25.6

Q ss_pred             CCCccccCcccccccCchhHHHHHhhhcC
Q 043322           58 TAKVFSCNFCMRKFFSSQALGGHQNAHKR   86 (187)
Q Consensus        58 gekpf~C~~Cgk~F~~~~~L~~H~~~H~g   86 (187)
                      +...|.|..|.-+|.+...|..|...|..
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            34569999999999999999999999874