Query 043330
Match_columns 225
No_of_seqs 119 out of 395
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 06:17:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043330.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043330hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gha_A Disulfide bond formatio 98.6 2.5E-07 8.6E-12 77.0 10.4 160 6-183 24-193 (202)
2 3gyk_A 27KDA outer membrane pr 98.6 4.4E-07 1.5E-11 72.4 10.7 151 6-178 17-169 (175)
3 3bci_A Disulfide bond protein 98.5 6.7E-07 2.3E-11 72.4 11.3 159 5-181 5-177 (186)
4 2rem_A Disulfide oxidoreductas 98.4 2.5E-06 8.5E-11 68.9 10.4 146 10-177 24-179 (193)
5 3h93_A Thiol:disulfide interch 98.3 4.3E-06 1.5E-10 67.8 9.5 136 9-166 23-163 (192)
6 3f4s_A Alpha-DSBA1, putative u 98.3 4E-06 1.4E-10 71.2 9.6 155 6-181 34-210 (226)
7 2znm_A Thiol:disulfide interch 98.2 3.6E-06 1.2E-10 68.1 8.5 138 6-165 17-160 (195)
8 3gmf_A Protein-disulfide isome 98.2 6.7E-06 2.3E-10 68.8 9.6 154 6-181 10-196 (205)
9 4dvc_A Thiol:disulfide interch 98.2 6.5E-06 2.2E-10 65.4 8.6 152 9-177 19-177 (184)
10 3hd5_A Thiol:disulfide interch 98.2 2.1E-05 7.2E-10 63.8 11.5 146 9-177 23-179 (195)
11 3hz8_A Thiol:disulfide interch 98.0 4.8E-05 1.6E-09 62.3 10.2 147 9-177 22-178 (193)
12 1z6m_A Conserved hypothetical 97.9 8.6E-05 2.9E-09 59.0 10.0 144 6-177 22-173 (175)
13 3l9v_A Putative thiol-disulfid 97.7 0.00012 4.1E-09 59.7 7.9 141 10-166 13-156 (189)
14 2in3_A Hypothetical protein; D 97.7 0.00018 6.2E-09 58.9 8.9 165 11-180 6-208 (216)
15 3gn3_A Putative protein-disulf 97.6 0.00049 1.7E-08 56.2 10.2 147 10-177 13-181 (182)
16 2imf_A HCCA isomerase, 2-hydro 97.5 0.00034 1.1E-08 57.3 8.6 159 13-180 1-194 (203)
17 3l9s_A Thiol:disulfide interch 97.5 0.00025 8.5E-09 58.2 7.6 139 9-166 19-162 (191)
18 3c7m_A Thiol:disulfide interch 97.5 0.00014 4.8E-09 58.3 5.9 66 110-177 115-189 (195)
19 3kzq_A Putative uncharacterize 97.2 0.002 6.7E-08 52.8 10.1 165 13-181 3-202 (208)
20 3gl5_A Putative DSBA oxidoredu 97.1 0.0032 1.1E-07 53.4 10.1 167 12-183 2-214 (239)
21 3fz5_A Possible 2-hydroxychrom 96.7 0.0039 1.3E-07 51.1 7.0 160 11-177 3-197 (202)
22 1r4w_A Glutathione S-transfera 96.4 0.013 4.5E-07 48.6 8.4 76 109-187 135-219 (226)
23 3feu_A Putative lipoprotein; a 96.2 0.011 3.8E-07 47.8 7.0 145 11-177 22-179 (185)
24 3rpp_A Glutathione S-transfera 96.1 0.042 1.4E-06 46.1 10.4 170 11-187 4-219 (234)
25 1un2_A DSBA, thiol-disulfide i 93.5 0.042 1.4E-06 45.1 3.1 56 109-166 6-61 (197)
26 1v58_A Thiol:disulfide interch 89.4 0.49 1.7E-05 39.6 5.4 44 7-54 93-136 (241)
27 3gv1_A Disulfide interchange p 81.3 2.2 7.4E-05 33.2 5.0 40 8-54 11-50 (147)
28 3tdg_A DSBG, putative uncharac 81.0 1.5 5.2E-05 38.1 4.4 40 9-54 145-184 (273)
29 4fo5_A Thioredoxin-like protei 80.3 3.3 0.00011 30.5 5.6 47 3-52 24-70 (143)
30 1t3b_A Thiol:disulfide interch 77.2 3.3 0.00011 33.6 5.1 42 8-54 83-124 (211)
31 3hxs_A Thioredoxin, TRXP; elec 75.3 7.5 0.00026 28.4 6.3 40 4-45 44-83 (141)
32 1wjk_A C330018D20RIK protein; 75.3 5.6 0.00019 28.3 5.4 31 8-44 12-42 (100)
33 1fo5_A Thioredoxin; disulfide 74.9 3.2 0.00011 27.3 3.8 35 11-47 2-36 (85)
34 1eej_A Thiol:disulfide interch 74.1 4.3 0.00015 32.9 5.1 42 7-53 82-123 (216)
35 3ha9_A Uncharacterized thiored 71.3 4.4 0.00015 30.5 4.2 43 5-52 31-73 (165)
36 2k8s_A Thioredoxin; dimer, str 70.4 8.6 0.00029 25.6 5.2 16 14-29 3-18 (80)
37 3eyt_A Uncharacterized protein 68.5 7.5 0.00026 28.8 5.0 45 5-51 22-66 (158)
38 3hcz_A Possible thiol-disulfid 66.0 4.1 0.00014 29.6 2.9 45 5-52 25-69 (148)
39 3erw_A Sporulation thiol-disul 65.5 8.7 0.0003 27.6 4.7 42 6-51 30-71 (145)
40 2lrt_A Uncharacterized protein 64.8 6.7 0.00023 29.4 4.0 45 5-52 29-73 (152)
41 1o73_A Tryparedoxin; electron 64.7 10 0.00035 27.5 5.0 45 5-51 22-66 (144)
42 2b5x_A YKUV protein, TRXY; thi 64.2 4.9 0.00017 29.1 3.1 38 9-48 27-64 (148)
43 2l57_A Uncharacterized protein 61.9 14 0.00049 26.3 5.3 31 8-39 23-53 (126)
44 3cxg_A Putative thioredoxin; m 61.5 8.5 0.00029 28.3 4.0 38 7-50 36-73 (133)
45 3rhb_A ATGRXC5, glutaredoxin-C 60.7 19 0.00066 25.5 5.8 47 116-167 39-85 (113)
46 3msz_A Glutaredoxin 1; alpha-b 60.3 3.8 0.00013 27.5 1.7 18 12-29 3-20 (89)
47 3s9f_A Tryparedoxin; thioredox 59.2 6.7 0.00023 30.0 3.2 45 6-52 43-87 (165)
48 2trx_A Thioredoxin; electron t 58.6 21 0.00073 24.3 5.5 34 9-44 18-51 (108)
49 3die_A Thioredoxin, TRX; elect 58.6 19 0.00065 24.3 5.2 34 10-45 18-51 (106)
50 1thx_A Thioredoxin, thioredoxi 57.9 18 0.00062 24.8 5.1 34 9-44 23-56 (115)
51 3gl3_A Putative thiol:disulfid 57.6 9 0.00031 28.0 3.5 43 6-51 23-65 (152)
52 3fkf_A Thiol-disulfide oxidore 57.4 14 0.00049 26.5 4.6 33 8-42 30-62 (148)
53 3raz_A Thioredoxin-related pro 57.4 16 0.00054 26.8 4.9 44 5-51 18-61 (151)
54 3lor_A Thiol-disulfide isomera 57.1 9.8 0.00034 28.1 3.7 42 8-51 27-68 (160)
55 4evm_A Thioredoxin family prot 56.4 9.7 0.00033 26.7 3.5 37 6-44 17-53 (138)
56 1nsw_A Thioredoxin, TRX; therm 55.9 21 0.00072 24.1 5.1 33 10-44 16-48 (105)
57 2i4a_A Thioredoxin; acidophIle 55.6 22 0.00075 24.0 5.1 30 9-39 18-47 (107)
58 2yzu_A Thioredoxin; redox prot 55.5 23 0.00078 23.8 5.2 33 10-44 17-49 (109)
59 3eur_A Uncharacterized protein 55.3 8.9 0.0003 28.0 3.1 45 5-52 25-72 (142)
60 3qmx_A Glutaredoxin A, glutare 54.9 6.2 0.00021 28.2 2.1 23 7-29 10-32 (99)
61 2e0q_A Thioredoxin; electron t 54.9 22 0.00074 23.7 5.0 33 10-44 15-47 (104)
62 1fb6_A Thioredoxin M; electron 54.9 23 0.00079 23.8 5.2 33 10-44 17-49 (105)
63 1nho_A Probable thioredoxin; b 54.8 4.9 0.00017 26.4 1.5 19 12-30 2-20 (85)
64 3or5_A Thiol:disulfide interch 54.3 11 0.00037 27.9 3.5 40 9-51 32-71 (165)
65 1zzo_A RV1677; thioredoxin fol 53.4 11 0.00038 26.5 3.4 33 9-43 23-55 (136)
66 2lrn_A Thiol:disulfide interch 53.0 13 0.00044 27.4 3.8 43 6-51 24-66 (152)
67 1aba_A Glutaredoxin; electron 52.8 7.4 0.00025 26.6 2.2 15 15-29 2-20 (87)
68 1lu4_A Soluble secreted antige 52.8 6.5 0.00022 28.0 2.0 34 8-43 21-54 (136)
69 2l5l_A Thioredoxin; structural 52.5 32 0.0011 24.9 5.9 33 10-44 37-69 (136)
70 3dwv_A Glutathione peroxidase- 52.4 7.3 0.00025 30.4 2.3 44 5-51 40-83 (187)
71 2f9s_A Thiol-disulfide oxidore 52.0 13 0.00045 27.2 3.6 33 6-39 21-53 (151)
72 2ct6_A SH3 domain-binding glut 51.9 10 0.00035 27.5 2.9 17 12-28 7-23 (111)
73 3ctg_A Glutaredoxin-2; reduced 51.7 7.6 0.00026 29.1 2.2 16 14-29 38-53 (129)
74 3c1r_A Glutaredoxin-1; oxidize 51.6 13 0.00045 27.1 3.6 22 14-39 26-47 (118)
75 1xwb_A Thioredoxin; dimerizati 51.6 31 0.0011 23.1 5.4 29 10-39 19-47 (106)
76 1t00_A Thioredoxin, TRX; redox 51.3 28 0.00094 23.9 5.2 33 10-44 22-54 (112)
77 1dby_A Chloroplast thioredoxin 51.2 28 0.00097 23.5 5.2 33 10-44 18-50 (107)
78 2p5q_A Glutathione peroxidase 50.9 11 0.00039 28.0 3.2 42 7-51 28-69 (170)
79 2cvb_A Probable thiol-disulfid 50.4 13 0.00046 28.5 3.6 43 6-52 28-70 (188)
80 3hdc_A Thioredoxin family prot 49.9 17 0.00057 27.0 4.0 45 6-53 36-80 (158)
81 3gnj_A Thioredoxin domain prot 49.8 31 0.0011 23.4 5.2 21 10-30 21-41 (111)
82 1i5g_A Tryparedoxin II; electr 49.6 7.8 0.00027 28.3 2.0 43 8-52 25-67 (144)
83 3ul3_B Thioredoxin, thioredoxi 49.4 39 0.0013 24.0 5.9 31 8-39 39-69 (128)
84 2lqo_A Putative glutaredoxin R 49.0 6.1 0.00021 28.2 1.3 16 14-29 5-20 (92)
85 1w4v_A Thioredoxin, mitochondr 48.8 29 0.001 24.4 5.0 33 10-44 30-62 (119)
86 3nzn_A Glutaredoxin; structura 48.1 8.7 0.0003 27.1 2.0 19 11-29 20-38 (103)
87 2lja_A Putative thiol-disulfid 47.9 13 0.00044 27.1 3.0 43 6-51 25-67 (152)
88 3tco_A Thioredoxin (TRXA-1); d 47.5 33 0.0011 23.0 5.0 32 11-44 21-52 (109)
89 2o8v_B Thioredoxin 1; disulfid 47.3 32 0.0011 24.9 5.1 34 9-44 38-71 (128)
90 3kcm_A Thioredoxin family prot 47.3 19 0.00065 26.2 3.9 42 7-51 24-65 (154)
91 2vlu_A Thioredoxin, thioredoxi 47.2 31 0.0011 24.1 4.9 33 10-44 33-65 (122)
92 3m9j_A Thioredoxin; oxidoreduc 46.3 36 0.0012 22.8 5.1 33 10-44 19-51 (105)
93 1ego_A Glutaredoxin; electron 46.2 8.1 0.00028 25.6 1.5 16 14-29 2-17 (85)
94 3cmi_A Peroxiredoxin HYR1; thi 46.1 33 0.0011 25.8 5.2 43 5-51 26-68 (171)
95 3ia1_A THIO-disulfide isomeras 46.0 17 0.00059 26.6 3.5 32 6-39 26-57 (154)
96 2i1u_A Thioredoxin, TRX, MPT46 45.9 37 0.0013 23.5 5.2 29 10-39 29-57 (121)
97 1ti3_A Thioredoxin H, PTTRXH1; 45.6 34 0.0012 23.3 4.9 29 10-39 25-53 (113)
98 1ep7_A Thioredoxin CH1, H-type 45.1 34 0.0012 23.3 4.8 31 11-43 24-54 (112)
99 2l5o_A Putative thioredoxin; s 44.7 39 0.0013 24.4 5.3 40 10-52 27-66 (153)
100 1o8x_A Tryparedoxin, TRYX, TXN 44.7 15 0.00052 26.8 2.9 42 8-51 25-66 (146)
101 3c1r_A Glutaredoxin-1; oxidize 44.3 29 0.00098 25.2 4.4 29 134-167 66-94 (118)
102 2v1m_A Glutathione peroxidase; 44.2 21 0.00073 26.4 3.8 44 6-52 26-69 (169)
103 2h30_A Thioredoxin, peptide me 43.9 16 0.00054 27.0 3.0 33 6-39 33-65 (164)
104 3fw2_A Thiol-disulfide oxidore 43.7 36 0.0012 24.7 5.0 41 8-51 30-73 (150)
105 2wul_A Glutaredoxin related pr 43.4 25 0.00085 26.3 4.0 43 116-167 45-88 (118)
106 1fov_A Glutaredoxin 3, GRX3; a 43.3 11 0.00038 24.7 1.8 16 14-29 2-17 (82)
107 3l4n_A Monothiol glutaredoxin- 43.3 30 0.001 25.9 4.5 15 153-167 68-82 (127)
108 1h75_A Glutaredoxin-like prote 43.1 11 0.00036 24.9 1.7 16 14-29 2-17 (81)
109 2dml_A Protein disulfide-isome 42.9 24 0.00084 25.0 3.8 35 9-45 33-67 (130)
110 2p31_A CL683, glutathione pero 42.1 23 0.00079 27.2 3.8 43 6-51 44-86 (181)
111 2gs3_A PHGPX, GPX-4, phospholi 41.9 19 0.00064 27.8 3.2 44 6-52 44-87 (185)
112 1r7h_A NRDH-redoxin; thioredox 41.7 12 0.0004 24.0 1.7 16 14-29 2-17 (75)
113 3uvt_A Thioredoxin domain-cont 41.1 26 0.00091 23.7 3.6 20 11-30 21-40 (111)
114 1kng_A Thiol:disulfide interch 41.1 31 0.001 25.0 4.2 25 6-30 37-61 (156)
115 2xc2_A Thioredoxinn; oxidoredu 41.1 17 0.00057 25.5 2.6 21 10-30 32-52 (117)
116 2k6v_A Putative cytochrome C o 41.0 14 0.00047 27.6 2.2 44 7-52 31-77 (172)
117 3l4n_A Monothiol glutaredoxin- 40.9 10 0.00034 28.7 1.4 16 14-29 15-30 (127)
118 3ctg_A Glutaredoxin-2; reduced 40.8 34 0.0012 25.4 4.4 29 134-167 78-106 (129)
119 3f3q_A Thioredoxin-1; His TAG, 40.8 47 0.0016 22.9 5.0 29 10-39 23-51 (109)
120 3aps_A DNAJ homolog subfamily 40.7 42 0.0014 23.3 4.8 29 10-39 20-48 (122)
121 3qfa_C Thioredoxin; protein-pr 40.6 44 0.0015 23.5 4.9 33 10-44 30-62 (116)
122 3gx8_A Monothiol glutaredoxin- 40.0 31 0.001 25.4 4.0 28 135-167 59-86 (121)
123 1kte_A Thioltransferase; redox 39.9 13 0.00045 25.8 1.8 16 14-29 13-28 (105)
124 3hz4_A Thioredoxin; NYSGXRC, P 39.2 42 0.0014 24.4 4.7 21 10-30 23-43 (140)
125 3ewl_A Uncharacterized conserv 39.2 21 0.00071 25.7 2.9 25 6-30 22-46 (142)
126 2vup_A Glutathione peroxidase- 39.1 38 0.0013 26.1 4.6 43 6-51 43-85 (190)
127 1xfl_A Thioredoxin H1; AT3G510 39.0 43 0.0015 23.9 4.7 29 10-39 37-65 (124)
128 3ic4_A Glutaredoxin (GRX-1); s 38.9 8.9 0.0003 26.1 0.8 17 13-29 12-28 (92)
129 3h8q_A Thioredoxin reductase 3 38.8 11 0.00039 27.2 1.4 16 14-29 18-33 (114)
130 2pu9_C TRX-F, thioredoxin F-ty 38.8 47 0.0016 22.7 4.7 29 10-39 23-51 (111)
131 2oe3_A Thioredoxin-3; electron 38.8 42 0.0014 23.6 4.5 33 10-44 29-61 (114)
132 1syr_A Thioredoxin; SGPP, stru 38.7 53 0.0018 22.6 5.0 29 10-39 25-53 (112)
133 2voc_A Thioredoxin; electron t 38.7 36 0.0012 23.5 4.1 21 10-30 16-36 (112)
134 1t1v_A SH3BGRL3, SH3 domain-bi 37.3 18 0.00062 24.9 2.2 14 14-27 3-16 (93)
135 2ggt_A SCO1 protein homolog, m 36.6 21 0.00072 26.3 2.6 33 6-39 18-51 (164)
136 2f8a_A Glutathione peroxidase 36.5 35 0.0012 27.2 4.1 43 6-51 42-84 (208)
137 3kij_A Probable glutathione pe 36.1 32 0.0011 26.2 3.8 43 6-51 33-75 (180)
138 3rhb_A ATGRXC5, glutaredoxin-C 36.0 15 0.0005 26.2 1.6 16 14-29 20-35 (113)
139 2rli_A SCO2 protein homolog, m 35.9 40 0.0014 24.9 4.2 33 6-39 21-54 (171)
140 2khp_A Glutaredoxin; thioredox 35.7 16 0.00055 24.7 1.7 16 14-29 7-22 (92)
141 2obi_A PHGPX, GPX-4, phospholi 35.7 34 0.0012 26.1 3.8 43 6-51 42-84 (183)
142 3lwa_A Secreted thiol-disulfid 35.4 23 0.00078 26.9 2.7 33 6-39 54-86 (183)
143 1wou_A Thioredoxin -related pr 35.1 84 0.0029 22.2 5.7 21 10-30 23-50 (123)
144 1jfu_A Thiol:disulfide interch 34.6 33 0.0011 26.0 3.6 30 9-39 58-87 (186)
145 2djj_A PDI, protein disulfide- 34.0 63 0.0022 22.3 4.8 22 9-30 23-44 (121)
146 3ipz_A Monothiol glutaredoxin- 34.0 15 0.00053 26.4 1.4 14 154-167 72-85 (109)
147 2lus_A Thioredoxion; CR-Trp16, 40.2 8.6 0.00029 27.7 0.0 26 5-30 18-45 (143)
148 2hze_A Glutaredoxin-1; thiored 33.8 18 0.0006 26.0 1.7 17 13-29 19-35 (114)
149 1ilo_A Conserved hypothetical 33.6 67 0.0023 20.2 4.6 17 13-30 2-18 (77)
150 3d6i_A Monothiol glutaredoxin- 33.5 26 0.00087 24.1 2.5 22 9-30 19-40 (112)
151 2vm1_A Thioredoxin, thioredoxi 33.4 67 0.0023 21.9 4.8 28 11-39 28-55 (118)
152 1z6n_A Hypothetical protein PA 33.1 60 0.002 25.2 4.9 22 9-30 52-73 (167)
153 2j23_A Thioredoxin; immune pro 33.0 47 0.0016 23.4 4.0 22 9-30 31-52 (121)
154 2vim_A Thioredoxin, TRX; thior 32.9 78 0.0027 20.9 5.0 29 10-39 18-46 (104)
155 2f51_A Thioredoxin; electron t 32.9 68 0.0023 22.5 4.9 29 10-39 22-50 (118)
156 2dj3_A Protein disulfide-isome 32.5 61 0.0021 22.9 4.6 29 10-39 24-52 (133)
157 1x5d_A Protein disulfide-isome 32.4 54 0.0019 23.0 4.3 21 10-30 24-44 (133)
158 3p2a_A Thioredoxin 2, putative 32.3 78 0.0027 23.0 5.3 34 9-44 53-86 (148)
159 2yan_A Glutaredoxin-3; oxidore 31.9 19 0.00064 25.4 1.6 16 14-29 18-38 (105)
160 1wik_A Thioredoxin-like protei 31.7 20 0.00068 25.6 1.7 16 14-29 16-36 (109)
161 1faa_A Thioredoxin F; electron 31.3 82 0.0028 21.9 5.1 29 10-39 36-64 (124)
162 3zyw_A Glutaredoxin-3; metal b 30.4 19 0.00065 26.1 1.4 14 154-167 70-83 (111)
163 1v98_A Thioredoxin; oxidoreduc 30.3 96 0.0033 22.2 5.4 32 10-44 50-81 (140)
164 1gh2_A Thioredoxin-like protei 30.2 35 0.0012 23.2 2.8 22 9-30 19-40 (107)
165 2klx_A Glutaredoxin; thioredox 30.1 15 0.00053 24.7 0.8 16 14-29 7-22 (89)
166 2e7p_A Glutaredoxin; thioredox 29.7 27 0.00091 24.4 2.1 16 14-29 21-36 (116)
167 2fgx_A Putative thioredoxin; N 29.3 69 0.0023 23.3 4.4 21 9-29 26-46 (107)
168 2hyx_A Protein DIPZ; thioredox 28.8 48 0.0016 29.2 4.0 43 6-51 77-119 (352)
169 1xvw_A Hypothetical protein RV 28.7 38 0.0013 24.9 2.9 41 10-53 34-76 (160)
170 2wem_A Glutaredoxin-related pr 28.1 22 0.00075 26.3 1.4 14 154-167 75-88 (118)
171 2ppt_A Thioredoxin-2; thiredox 27.5 84 0.0029 23.5 4.8 22 9-30 62-83 (155)
172 1zma_A Bacterocin transport ac 27.3 38 0.0013 23.6 2.6 20 11-30 29-48 (118)
173 2l6c_A Thioredoxin; oxidoreduc 27.2 43 0.0015 23.2 2.9 19 11-29 19-37 (110)
174 2ls5_A Uncharacterized protein 33.1 13 0.00045 27.5 0.0 25 6-30 28-52 (159)
175 1un2_A DSBA, thiol-disulfide i 26.9 60 0.0021 25.8 4.0 44 9-53 111-156 (197)
176 3kh7_A Thiol:disulfide interch 26.4 45 0.0016 25.3 3.1 31 8-39 55-85 (176)
177 2dbc_A PDCL2, unnamed protein 26.0 51 0.0017 24.0 3.2 21 10-30 29-49 (135)
178 3drn_A Peroxiredoxin, bacterio 26.0 36 0.0012 25.3 2.4 44 6-52 23-68 (161)
179 3fk8_A Disulphide isomerase; A 25.6 63 0.0022 22.9 3.6 25 10-35 28-52 (133)
180 2cq9_A GLRX2 protein, glutared 25.5 28 0.00096 25.7 1.6 16 14-29 28-43 (130)
181 1we0_A Alkyl hydroperoxide red 25.4 30 0.001 26.6 1.8 44 6-52 26-70 (187)
182 2dj1_A Protein disulfide-isome 25.3 54 0.0018 23.4 3.2 21 10-30 33-53 (140)
183 2axo_A Hypothetical protein AT 25.2 35 0.0012 29.4 2.3 21 9-29 40-60 (270)
184 4euy_A Uncharacterized protein 25.1 1.6E+02 0.0054 19.7 6.1 22 9-30 16-37 (105)
185 1rw1_A Conserved hypothetical 24.8 30 0.001 25.1 1.7 16 14-29 1-16 (114)
186 3kp8_A Vkorc1/thioredoxin doma 24.7 27 0.00093 24.8 1.3 28 11-44 12-39 (106)
187 2ywm_A Glutaredoxin-like prote 24.4 84 0.0029 24.6 4.4 29 9-39 19-48 (229)
188 3u5r_E Uncharacterized protein 23.8 48 0.0016 26.3 2.8 43 6-51 53-96 (218)
189 1uvq_C Orexin; immunology, MHC 22.8 43 0.0015 19.3 1.6 18 147-164 4-21 (33)
190 3dxb_A Thioredoxin N-terminall 22.6 1.3E+02 0.0044 23.7 5.2 34 10-45 29-62 (222)
191 1a8l_A Protein disulfide oxido 22.5 1.1E+02 0.0037 23.8 4.7 23 8-30 131-153 (226)
192 2yj7_A LPBCA thioredoxin; oxid 27.9 18 0.00063 24.1 0.0 22 9-30 17-38 (106)
193 2bmx_A Alkyl hydroperoxidase C 22.2 63 0.0022 24.9 3.2 45 6-53 40-85 (195)
194 2ht9_A Glutaredoxin-2; thiored 22.1 35 0.0012 26.0 1.6 16 14-29 50-65 (146)
195 2ojl_A Hypothetical protein; B 21.8 2.1E+02 0.0071 21.2 5.8 39 11-52 7-47 (108)
196 3gkn_A Bacterioferritin comigr 21.7 59 0.002 23.9 2.8 33 6-39 30-63 (163)
197 1r26_A Thioredoxin; redox-acti 21.4 1.2E+02 0.004 21.7 4.4 29 10-39 36-64 (125)
198 1u6t_A SH3 domain-binding glut 20.8 52 0.0018 24.8 2.3 16 152-167 61-76 (121)
199 2wz9_A Glutaredoxin-3; protein 20.2 1.5E+02 0.0053 21.6 5.0 20 11-30 32-51 (153)
No 1
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=98.60 E-value=2.5e-07 Score=76.99 Aligned_cols=160 Identities=13% Similarity=0.162 Sum_probs=109.2
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccc--cceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLI--SIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACA 83 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~--~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~ 83 (225)
+.....+|.|..|.--.||+|.+|-. .+.|.+.+.+. +.+.|.++||-- ||+.-=..-..-.|+
T Consensus 24 ~G~~~a~vtvvef~D~~CP~C~~~~~-~~~~~l~~~~~~~g~v~~~~~~~p~-------------~~~~s~~Aa~aa~a~ 89 (202)
T 3gha_A 24 LGKDDAPVTVVEFGDYKCPSCKVFNS-DIFPKIQKDFIDKGDVKFSFVNVMF-------------HGKGSRLAALASEEV 89 (202)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHH-HTHHHHHHHTTTTTSEEEEEEECCC-------------SHHHHHHHHHHHHHH
T ss_pred ecCCCCCEEEEEEECCCChhHHHHHH-HhhHHHHHHhccCCeEEEEEEecCc-------------cchhHHHHHHHHHHH
Confidence 45677899999999999999999954 46666653343 467788777632 222111111222233
Q ss_pred hhhccCccchhhhhhhhcchhcc-----CchhhHHHHHhh-cCCCcccccccccCCchhHHHHHHHHhhccCCCCCceee
Q 043330 84 INVLKNVNKYYGFIYCIEFLAIE-----GRHKDWQTCFNT-LGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILP 157 (225)
Q Consensus 84 i~~~~~~~~~~~fI~C~~~~~~~-----~~~~~~~~Ca~~-~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VP 157 (225)
... +..++++|..=+...... .........+.+ .|+|.+.+.+|.++......+.+..+....+ ++.-+|
T Consensus 90 ~~~--~~~~f~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~--gV~gtP 165 (202)
T 3gha_A 90 WKE--DPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKM--NIQATP 165 (202)
T ss_dssp HHH--CGGGHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHT--TCCSSC
T ss_pred Hhh--CHHHHHHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHc--CCCcCC
Confidence 222 456788888877654321 123446678888 9999999999998888777777777766665 589999
Q ss_pred EEEECCeechh--hHhhHHHHHHHhhcC
Q 043330 158 WVLVNNQAIRN--DYENFTAYVCRAYKG 183 (225)
Q Consensus 158 wI~iNG~~~~~--~~~nl~~~IC~~y~g 183 (225)
+++|||+.+.. ..+.|...|=....+
T Consensus 166 tfvvnG~~~~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 166 TIYVNDKVIKNFADYDEIKETIEKELKG 193 (202)
T ss_dssp EEEETTEECSCTTCHHHHHHHHHHHHHH
T ss_pred EEEECCEEecCCCCHHHHHHHHHHHHHh
Confidence 99999998643 467787777666554
No 2
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.57 E-value=4.4e-07 Score=72.38 Aligned_cols=151 Identities=14% Similarity=0.199 Sum_probs=99.7
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAIN 85 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~ 85 (225)
+.....+|.|.+|+-..||+|++|. ..|.+++. +..+ +.|.++++.-. |+.-=...+.-.|+..
T Consensus 17 ~G~~~a~v~i~~f~d~~Cp~C~~~~-~~l~~l~~-~~~~-v~~~~~~~p~~-------------~~~s~~aa~~~~~a~~ 80 (175)
T 3gyk_A 17 LGNPEGDVTVVEFFDYNCPYCRRAM-AEVQGLVD-ADPN-VRLVYREWPIL-------------GEGSDFAARAALAARQ 80 (175)
T ss_dssp EECTTCSEEEEEEECTTCHHHHHHH-HHHHHHHH-HCTT-EEEEEEECCCS-------------CHHHHHHHHHHHHGGG
T ss_pred cCCCCCCEEEEEEECCCCccHHHHH-HHHHHHHH-hCCC-EEEEEEeCCCC-------------CCChHHHHHHHHHHHH
Confidence 4567789999999999999999996 44777776 4555 77777776421 1111111222223322
Q ss_pred hccCccchhhhhhhhcchhccCchhhHHHHHhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECCee
Q 043330 86 VLKNVNKYYGFIYCIEFLAIEGRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNNQA 165 (225)
Q Consensus 86 ~~~~~~~~~~fI~C~~~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~ 165 (225)
...++.|..=+...............+++.|+|.+.+.+|.++......+.+..+....+ ++..+||++|||+.
T Consensus 81 ----~~~~~~~~~~lf~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~~i~g~~ 154 (175)
T 3gyk_A 81 ----QGKYEAFHWALMGMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKL--GFNGTPSFVVEDAL 154 (175)
T ss_dssp ----GTCHHHHHHHHHTCSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHH--TCCSSSEEEETTEE
T ss_pred ----HhHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHc--CCccCCEEEECCEE
Confidence 134455544333321112234566789999999999999999998888888887777766 58999999999986
Q ss_pred chh--hHhhHHHHHH
Q 043330 166 IRN--DYENFTAYVC 178 (225)
Q Consensus 166 ~~~--~~~nl~~~IC 178 (225)
+.. ..+.|...|=
T Consensus 155 ~~G~~~~~~l~~~i~ 169 (175)
T 3gyk_A 155 VPGFVEQSQLQDAVD 169 (175)
T ss_dssp ECSCCCHHHHHHHHH
T ss_pred eeCCCCHHHHHHHHH
Confidence 532 3455555553
No 3
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=98.55 E-value=6.7e-07 Score=72.36 Aligned_cols=159 Identities=13% Similarity=0.181 Sum_probs=97.2
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccc--cceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhh
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLI--SIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEAC 82 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~--~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC 82 (225)
.+.....+|+|.+|+.-.||+|.+|-. .|.+.+...+. +.+.|.+.||.- ||+.-=...+.-.|
T Consensus 5 ~~G~~~a~~~i~~f~D~~Cp~C~~~~~-~l~~~l~~~~~~~~~v~~~~~~~p~-------------~~~~s~~aa~a~~~ 70 (186)
T 3bci_A 5 TTSSKNGKPLVVVYGDYKCPYCKELDE-KVMPKLRKNYIDNHKVEYQFVNLAF-------------LGKDSIVGSRASHA 70 (186)
T ss_dssp ------CCCEEEEEECTTCHHHHHHHH-HHHHHHHHHTTTTTSSEEEEEECCC-------------SCTTHHHHHHHHHH
T ss_pred CcCCCCCCeEEEEEECCCChhHHHHHH-HHHHHHHHHhccCCeEEEEEEecCc-------------CCcchHHHHHHHHH
Confidence 355667899999999999999999953 35565542343 357888888742 12211112223334
Q ss_pred hhhhccCccchhhhhhhhcchhcc-----CchhhHHHHHhhcCCCccc---ccccc--cCCchhHHHHHHHHhhccCCCC
Q 043330 83 AINVLKNVNKYYGFIYCIEFLAIE-----GRHKDWQTCFNTLGLPAKP---VLDCY--KSGNGTKLLLQHAYETSHLIPP 152 (225)
Q Consensus 83 ~i~~~~~~~~~~~fI~C~~~~~~~-----~~~~~~~~Ca~~~gld~~~---I~~C~--~s~~G~~Ll~~~~~~T~~l~P~ 152 (225)
+... ...+.+.|..=+...... .........+++.|+|.+. +.+|. ++......+.+.-+....+ +
T Consensus 71 a~~~--~~~~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~--g 146 (186)
T 3bci_A 71 VLMY--APKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDN--H 146 (186)
T ss_dssp HHHH--CGGGHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHT--T
T ss_pred HHHh--CHHHHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHc--C
Confidence 4332 123456665545433210 1234566788999999988 99998 8777777777666555555 5
Q ss_pred CceeeEEEECCeechh--hHhhHHHHHHHhh
Q 043330 153 HTILPWVLVNNQAIRN--DYENFTAYVCRAY 181 (225)
Q Consensus 153 ~~~VPwI~iNG~~~~~--~~~nl~~~IC~~y 181 (225)
+..+|+++|||+.+.. ..+.|...|=...
T Consensus 147 v~GtPt~vvnG~~~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 147 IKTTPTAFINGEKVEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp CCSSSEEEETTEECSCTTCHHHHHHHHHC--
T ss_pred CCCCCeEEECCEEcCCCCCHHHHHHHHHHHH
Confidence 8999999999997642 3566766665433
No 4
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.37 E-value=2.5e-06 Score=68.90 Aligned_cols=146 Identities=12% Similarity=0.096 Sum_probs=93.2
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhhhccC
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAINVLKN 89 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~~~~~ 89 (225)
..+|.|.+|+...||+|..|.. .|..+.. +..+.+.|..+|+... +..+ ...+.-.|+..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~-~l~~l~~-~~~~~v~~~~~p~~~~-------------~~s~-~a~~a~~~a~~---- 83 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDS-KLQAWGA-RQAKDVRFTLVPAVFG-------------GVWD-PFARAYLAADV---- 83 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH-HHHHHHH-TSCTTEEEEEEECCCS-------------TTHH-HHHHHHHHHHH----
T ss_pred CCCeEEEEEECCCChhHhhhhH-HHHHHHH-hcCCceEEEEeCcccC-------------CCcH-HHHHHHHHHHH----
Confidence 6789999999999999999964 4666665 4566678888887421 0000 01111222221
Q ss_pred ccchhhhhhhhcchhc--------cCchhhHHHHHhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEE
Q 043330 90 VNKYYGFIYCIEFLAI--------EGRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLV 161 (225)
Q Consensus 90 ~~~~~~fI~C~~~~~~--------~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~i 161 (225)
....+.|..-+..... ..........+++.|+|.+.+.+|.++......+.+..+....+ ++..+|+++|
T Consensus 84 ~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~vi 161 (193)
T 2rem_A 84 LGVAKRSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKV--RPVGTPTIVV 161 (193)
T ss_dssp TTCHHHHHHHHHHHHHTTCCSCSTTCCHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHH--CCSSSSEEEE
T ss_pred cCcHHHHHHHHHHHHHHhcccCcCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHh--CCCCCCeEEE
Confidence 1234455444433211 01234567788999999999999999888877777776666655 5899999999
Q ss_pred CCeec-h-hhHhhHHHHH
Q 043330 162 NNQAI-R-NDYENFTAYV 177 (225)
Q Consensus 162 NG~~~-~-~~~~nl~~~I 177 (225)
||+.. . ...+.|...|
T Consensus 162 ng~~~~~g~~~~~l~~~i 179 (193)
T 2rem_A 162 NGRYMVTGHDFEDTLRIT 179 (193)
T ss_dssp TTTEEECCSSHHHHHHHH
T ss_pred CCEEEecCCCHHHHHHHH
Confidence 99864 2 1344454444
No 5
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.26 E-value=4.3e-06 Score=67.75 Aligned_cols=136 Identities=12% Similarity=0.037 Sum_probs=90.3
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhhhcc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAINVLK 88 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~~~~ 88 (225)
...+|.|..|+-..||+|.+|.. .|..+.. ++.+.+.|..+|... |+... ...+.-.|+-.
T Consensus 23 ~~~~~~i~~f~d~~Cp~C~~~~~-~l~~l~~-~~~~~v~~~~~p~~~-------------~~~~~-~aa~a~~aa~~--- 83 (192)
T 3h93_A 23 QPGKIEVVELFWYGCPHCYAFEP-TIVPWSE-KLPADVHFVRLPALF-------------GGIWN-VHGQMFLTLES--- 83 (192)
T ss_dssp STTSEEEEEEECTTCHHHHHHHH-HHHHHHH-TCCTTEEEEEEECCC-------------STHHH-HHHHHHHHHHH---
T ss_pred CCCCCEEEEEECCCChhHHHhhH-HHHHHHH-hCCCCeEEEEEehhh-------------ccchH-HHHHHHHHHHH---
Confidence 46789999999999999999964 3444444 566667777777521 11100 00111222221
Q ss_pred Cccchhhhhhhhcchhc-----cCchhhHHHHHhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECC
Q 043330 89 NVNKYYGFIYCIEFLAI-----EGRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNN 163 (225)
Q Consensus 89 ~~~~~~~fI~C~~~~~~-----~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG 163 (225)
..+.++|..=+..... ..........+...|+|.+.+.+|.++......+.+..+....+ ++..+||++|||
T Consensus 84 -~g~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~~vng 160 (192)
T 3h93_A 84 -MGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAY--QVTGVPTMVVNG 160 (192)
T ss_dssp -HTCCHHHHHHHHHHHHTSCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHH--TCCSSSEEEETT
T ss_pred -cCCHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHh--CCCCCCeEEECC
Confidence 2245555555544321 12344567889999999999999999988888888777776665 589999999999
Q ss_pred eec
Q 043330 164 QAI 166 (225)
Q Consensus 164 ~~~ 166 (225)
+..
T Consensus 161 ~~~ 163 (192)
T 3h93_A 161 KYR 163 (192)
T ss_dssp TEE
T ss_pred EEE
Confidence 864
No 6
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=98.26 E-value=4e-06 Score=71.15 Aligned_cols=155 Identities=11% Similarity=0.102 Sum_probs=100.0
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcc--ccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDL--ISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACA 83 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l--~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~ 83 (225)
+.....+|.|.+|.-=.||+|.+|-.. +.|.+..++ .+.+.|.+.+|-- . +.--.+-+.-.|+
T Consensus 34 ~G~~~A~vtIvef~Dy~CP~C~~~~~~-~~~~l~~~~~~~g~V~~v~~~~p~-~-------------~~s~~Aa~aa~aa 98 (226)
T 3f4s_A 34 LGDPKAPILMIEYASLTCYHCSLFHRN-VFPKIKEKYIDTGKMLYIFRHFPL-D-------------YRGLKAAMLSHCY 98 (226)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHHH-THHHHHHHHTTTTSEEEEEEECCC-S-------------HHHHHHHHHGGGC
T ss_pred cCCCCCCEEEEEEECCCCHHHHHHHHH-HHHHHHHHcccCCeEEEEEEeCCC-C-------------hhHHHHHHHHHHh
Confidence 456778999999999999999999543 455544233 2356666666531 0 1001111222333
Q ss_pred hhhccCccchhhhhhhhcchhcc------CchhhHHHHHhhcCCCcccccccccCCchhHHHHHHHHhhcc-CCCCCcee
Q 043330 84 INVLKNVNKYYGFIYCIEFLAIE------GRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSH-LIPPHTIL 156 (225)
Q Consensus 84 i~~~~~~~~~~~fI~C~~~~~~~------~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~-l~P~~~~V 156 (225)
.+..++|+|..=++..... .........++..|+|.+.+.+|.++......+.+..+.... + +++.+
T Consensus 99 ----~~~~~f~~~~~aLF~~q~~~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~--GV~Gt 172 (226)
T 3f4s_A 99 ----EKQEDYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKL--GITAV 172 (226)
T ss_dssp ----CSHHHHHHHHHHHHHTGGGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHH--CCCSS
T ss_pred ----hChHHHHHHHHHHHHhCHhhcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHc--CCCcC
Confidence 2344567776666543210 123456778999999999999999988887777776666655 5 58999
Q ss_pred eEEEE---CCeechh--h--------HhhHHHHHHHhh
Q 043330 157 PWVLV---NNQAIRN--D--------YENFTAYVCRAY 181 (225)
Q Consensus 157 PwI~i---NG~~~~~--~--------~~nl~~~IC~~y 181 (225)
|+++| ||+.+.. . ++.|...|=...
T Consensus 173 Ptfvv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l 210 (226)
T 3f4s_A 173 PIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLY 210 (226)
T ss_dssp CEEEEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCEEeeCCCCcccccccCHHHHHHHHHHHH
Confidence 99999 9987532 3 566766664443
No 7
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.23 E-value=3.6e-06 Score=68.12 Aligned_cols=138 Identities=14% Similarity=0.038 Sum_probs=90.9
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAIN 85 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~ 85 (225)
......+|.|.+|+...||+|.+|.. .|..+.. +..+.+.+..+|+.. |+.. -...+.-.|+-.
T Consensus 17 ~g~~~~~~~i~~f~d~~Cp~C~~~~~-~l~~l~~-~~~~~v~~~~~p~~~-------------~~~s-~~aa~a~~aa~~ 80 (195)
T 2znm_A 17 PQEQSGKIEVLEFFGYFCVHCHHFDP-LLLKLGK-ALPSDAYLRTEHVVW-------------QPEM-LGLARMAAAVNL 80 (195)
T ss_dssp CCSSSSSEEEEEEECTTSCCTTSSCH-HHHHHHH-HSCTTEEEEEEECCC-------------SGGG-HHHHHHHHHHHH
T ss_pred CCCCCCCcEEEEEECCCChhHHHHhH-HHHHHHH-HCCCceEEEEecccc-------------Cccc-HHHHHHHHHHHH
Confidence 34456899999999999999999964 3556555 455567777777521 1111 011122222221
Q ss_pred hccCccchhhhhhhhcchhc-----cCchhhHHHHHhhc-CCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEE
Q 043330 86 VLKNVNKYYGFIYCIEFLAI-----EGRHKDWQTCFNTL-GLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWV 159 (225)
Q Consensus 86 ~~~~~~~~~~fI~C~~~~~~-----~~~~~~~~~Ca~~~-gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI 159 (225)
....+.|..=+..... ..........+.+. |+|.+.+..|.++......+.+..+....+ ++..+|++
T Consensus 81 ----~~~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~ 154 (195)
T 2znm_A 81 ----SGLKYQANPAVFKAVYEQKIRLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQY--RIDSTPTV 154 (195)
T ss_dssp ----HTCHHHHHHHHHHHHHHCSSCTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHT--TCCSSSEE
T ss_pred ----cCcHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHc--CCCCCCeE
Confidence 2344556555543211 01234566788999 999999999999888888887776666665 58999999
Q ss_pred EECCee
Q 043330 160 LVNNQA 165 (225)
Q Consensus 160 ~iNG~~ 165 (225)
+|||+.
T Consensus 155 ving~~ 160 (195)
T 2znm_A 155 IVGGKY 160 (195)
T ss_dssp EETTTE
T ss_pred EECCEE
Confidence 999985
No 8
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=98.20 E-value=6.7e-06 Score=68.79 Aligned_cols=154 Identities=11% Similarity=0.184 Sum_probs=102.3
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcc--ccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDL--ISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACA 83 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l--~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~ 83 (225)
+.....+|+|.+|..-.||+|++|. ..+.|.+..++ .+.|.|.+.+|- . |+... .+-..-.|+
T Consensus 10 ~G~~~a~vtivef~D~~Cp~C~~~~-~~~~~~l~~~~i~~g~v~~v~r~~p--l-----------~~~s~-~aa~aa~~~ 74 (205)
T 3gmf_A 10 LGNPAAKLRLVEFVSYTCPHCSHFE-IESEGQLKIGMVQPGKGAIEVRNFV--R-----------DPIDM-TVALITNCV 74 (205)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHH-HHHHHHHHHHTTTTTSEEEEEEECC--C-----------SHHHH-HHHHHHHHS
T ss_pred ecCCCCCeEEEEEECCCCHHHHHHH-HHHHHHHHHHhccCCeEEEEEEeCC--C-----------CcchH-HHHHHHHhc
Confidence 4567789999999999999999996 44677776333 456777776662 1 11111 111222343
Q ss_pred hhhccCccchhhhhhhhcchhcc-------Cch---------------------hhHHHHHhhcCCCcccccccccCCch
Q 043330 84 INVLKNVNKYYGFIYCIEFLAIE-------GRH---------------------KDWQTCFNTLGLPAKPVLDCYKSGNG 135 (225)
Q Consensus 84 i~~~~~~~~~~~fI~C~~~~~~~-------~~~---------------------~~~~~Ca~~~gld~~~I~~C~~s~~G 135 (225)
.+.++|+|..=++..... -.. ......+...|+|.+.+.+|.++...
T Consensus 75 -----~~~~f~~~~~~Lf~~q~~~~~~~~~~~~~~~~~w~~~~~~~~l~~ia~~~~L~~~a~~~Gld~~~~~~~l~s~~~ 149 (205)
T 3gmf_A 75 -----PPSRFFTLHTAFMRSQAQWIGPLANSTEAQRQRWFNGTFATRTRAIASDFRFYDFMAARGMDRSTLDRCLSNEAL 149 (205)
T ss_dssp -----CHHHHHHHHHHHHHTHHHHCHHHHHCCHHHHHTTSSSCHHHHHHHHHHHTTHHHHHHTTTCCHHHHHHHHTCHHH
T ss_pred -----CHhHHHHHHHHHHHcCHHHHhcccccchhhhhccccchhHHHHHhccCHHHHHHHHHHcCCCHHHHHHHHcCHHH
Confidence 356788887777653210 000 12456778899999999999998877
Q ss_pred hHHHHHHHHhh-ccCCCCCceeeEEEECCeechh--hHhhHHHHHHHhh
Q 043330 136 TKLLLQHAYET-SHLIPPHTILPWVLVNNQAIRN--DYENFTAYVCRAY 181 (225)
Q Consensus 136 ~~Ll~~~~~~T-~~l~P~~~~VPwI~iNG~~~~~--~~~nl~~~IC~~y 181 (225)
...+.+..+.. ..+ +++-+|+++|||+.+.. .++.|...|=...
T Consensus 150 ~~~v~~~~~~a~~~~--GV~GtPtfvvng~~~~G~~~~e~l~~~i~~~~ 196 (205)
T 3gmf_A 150 AKKLAAETDEAINQY--NVSGTPSFMIDGILLAGTHDWASLRPQILARL 196 (205)
T ss_dssp HHHHHHHHHHHHHHH--CCCSSSEEEETTEECTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc--CCccCCEEEECCEEEeCCCCHHHHHHHHHHHh
Confidence 76666666555 555 58999999999998752 4667777765443
No 9
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.17 E-value=6.5e-06 Score=65.38 Aligned_cols=152 Identities=13% Similarity=0.098 Sum_probs=89.4
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhhhcc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAINVLK 88 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~~~~ 88 (225)
...++.|..|+-=.||+|.+|- ..|.++.. ++.+.+.+.++|+--.... ..=..-+..+|+...-
T Consensus 19 ~~~~~~vvEf~dy~Cp~C~~~~-~~~~~l~~-~~~~~~~~~~~~~~~~~~~------------~~~~~a~a~~~~~~~~- 83 (184)
T 4dvc_A 19 ASSSPVVSEFFSFYCPHCNTFE-PIIAQLKQ-QLPEGAKFQKNHVSFMGGN------------MGQAMSKAYATMIALE- 83 (184)
T ss_dssp CCSSCEEEEEECTTCHHHHHHH-HHHHHHHH-TSCTTCEEEEEECSSSSGG------------GHHHHHHHHHHHHHHT-
T ss_pred CCCCCEEEEEECCCCHhHHHHh-HHHHHHHh-hcCCceEEEEEecCCCCCc------------hHHHHHHHHHHHHHcC-
Confidence 3567788889999999999994 45666666 5666677777665211100 0000011112221111
Q ss_pred Cccchhhhh-hh-hcchhccCchhhHHHHHhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECCeec
Q 043330 89 NVNKYYGFI-YC-IEFLAIEGRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNNQAI 166 (225)
Q Consensus 89 ~~~~~~~fI-~C-~~~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~ 166 (225)
........+ .= ...............=+...|+|.+.+.+|.++..-...+.+..+....+ +++.+|+++|||++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gTPtfiINGky~ 161 (184)
T 4dvc_A 84 VEDKMVPVMFNRIHTLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDS--GLTGVPAVVVNNRYL 161 (184)
T ss_dssp CHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHH--TCCSSSEEEETTTEE
T ss_pred cHHHHHHHHHHHHHHHhhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHc--CCCcCCEEEECCEEe
Confidence 111111111 10 11111112233455667889999999999999888778777777766665 589999999999853
Q ss_pred h-----hhHhhHHHHH
Q 043330 167 R-----NDYENFTAYV 177 (225)
Q Consensus 167 ~-----~~~~nl~~~I 177 (225)
- ..+++|..+|
T Consensus 162 v~~~~~~s~e~~~~~i 177 (184)
T 4dvc_A 162 VQGQSAKSLDEYFDLV 177 (184)
T ss_dssp ECGGGCSSHHHHHHHH
T ss_pred eCCcCCCCHHHHHHHH
Confidence 1 2356676665
No 10
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.16 E-value=2.1e-05 Score=63.76 Aligned_cols=146 Identities=11% Similarity=0.023 Sum_probs=92.8
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhhhcc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAINVLK 88 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~~~~ 88 (225)
...++.|.+|+-..||.|++|. ..|..+.. .+.+.+.|..+|.-.. +.-=...+.-.|+.. .
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~-~~l~~l~~-~~~~~v~~~~~~~~~~--------------~~s~~aa~a~~aa~~-~- 84 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIE-PMVEDWAK-TAPQDVVLKQVPIAFN--------------AGMKPLQQLYYTLQA-L- 84 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHH-HHHHHHHH-TCCTTEEEEEEECCSS--------------GGGHHHHHHHHHHHH-T-
T ss_pred CCCCeEEEEEECCCCccHHHhh-HHHHHHHH-HCCCCeEEEEEecccC--------------cchHHHHHHHHHHHh-c-
Confidence 4578999999999999999995 33444444 5666677777775320 000011122222221 1
Q ss_pred Cccchhhhhhhhcchhc-----cCchhhHHHHHhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECC
Q 043330 89 NVNKYYGFIYCIEFLAI-----EGRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNN 163 (225)
Q Consensus 89 ~~~~~~~fI~C~~~~~~-----~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG 163 (225)
. .++|..=+..... ..........+++.|+|.+.+.+|.++......+.+..+....+ ++..+|+++|||
T Consensus 85 --g-~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gtPt~ving 159 (195)
T 3hd5_A 85 --E-RPDLHPKVFTAIHTERKRLFDKKAMGEWAASQGVDRAKFDSVFDSFSVQTQVQRASQLAEAA--HIDGTPAFAVGG 159 (195)
T ss_dssp --T-CTTHHHHHHHHHHTSCCCCCSHHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHT--TCCSSSEEEETT
T ss_pred --C-HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCHHHHHHHHcCHHHHHHHHHHHHHHHHh--CCCcCceEEECC
Confidence 1 2333333322110 02344567789999999999999999988888888887777766 589999999999
Q ss_pred eechh-----hH-hhHHHHH
Q 043330 164 QAIRN-----DY-ENFTAYV 177 (225)
Q Consensus 164 ~~~~~-----~~-~nl~~~I 177 (225)
+.... .. ++|.++|
T Consensus 160 ~~~~~g~~~~~~~e~~~~~i 179 (195)
T 3hd5_A 160 RYMTSPVLAGNDYAGALKVV 179 (195)
T ss_dssp TEEECTTTTTGGGTTHHHHH
T ss_pred EEEeCccccCChHHHHHHHH
Confidence 86421 23 5666555
No 11
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.96 E-value=4.8e-05 Score=62.30 Aligned_cols=147 Identities=15% Similarity=0.073 Sum_probs=90.1
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhhhcc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAINVLK 88 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~~~~ 88 (225)
...+|.|..|+.-.||.|.+|- ..|..+.+ ++.+.+.|..+|... ||.. =...+.-.|+...-
T Consensus 22 ~~~~v~vv~f~d~~Cp~C~~~~-~~l~~~~~-~~~~~v~~~~~p~~~-------------~~~~-~~aa~a~~aa~~~g- 84 (193)
T 3hz8_A 22 QAGKVEVLEFFGYFCPHCAHLE-PVLSKHAK-SFKDDMYLRTEHVVW-------------QKEM-LTLARLAAAVDMAA- 84 (193)
T ss_dssp STTSEEEEEEECTTCHHHHHHH-HHHHHHHT-TCCTTEEEEEEECCC-------------SGGG-HHHHHHHHHHHHHT-
T ss_pred CCCCcEEEEEECCCChhHHHHH-HHHHHHHH-HCCCCeEEEEecCCC-------------Cccc-HHHHHHHHHHHHcC-
Confidence 4568999999999999999995 33544444 566667777777631 1111 01112222332111
Q ss_pred Cccchhh--hhhhhcchh----c-cCchhhHHHHHhhc-CCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEE
Q 043330 89 NVNKYYG--FIYCIEFLA----I-EGRHKDWQTCFNTL-GLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVL 160 (225)
Q Consensus 89 ~~~~~~~--fI~C~~~~~----~-~~~~~~~~~Ca~~~-gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~ 160 (225)
.++. |..=+.... . .........-+.+. |+|.+.+.+|.++......+.+..+....+ +++-+|+++
T Consensus 85 ---~~~~~~~~~~lf~a~~~~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gtPt~v 159 (193)
T 3hz8_A 85 ---ADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTAFDGKKVLAAYESPESQARADKMQELTETF--QIDGVPTVI 159 (193)
T ss_dssp ---GGGHHHHHHHHHHHHHTSCCCTTSHHHHHHHHHHCTTTTHHHHHHHHHSHHHHHHHHHHHHHHHHT--TCCSSSEEE
T ss_pred ---chhHHhHHHHHHHHHHHhCcCCCCHHHHHHHHHHccCCCHHHHHHHHcCHHHHHHHHHHHHHHHHh--CCCcCCEEE
Confidence 1121 221111110 0 02234566788889 999999999999888888887777776665 589999999
Q ss_pred ECCeechh--hHhhHHHHH
Q 043330 161 VNNQAIRN--DYENFTAYV 177 (225)
Q Consensus 161 iNG~~~~~--~~~nl~~~I 177 (225)
|||+.... ..+.|..+|
T Consensus 160 vng~~~~~~~~~e~l~~~i 178 (193)
T 3hz8_A 160 VGGKYKVEFADWESGMNTI 178 (193)
T ss_dssp ETTTEEECCSSHHHHHHHH
T ss_pred ECCEEEecCCCHHHHHHHH
Confidence 99986432 344554444
No 12
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.88 E-value=8.6e-05 Score=58.97 Aligned_cols=144 Identities=10% Similarity=0.113 Sum_probs=79.8
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcc--ccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDL--ISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACA 83 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l--~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~ 83 (225)
+.....+|.|.+|+--.||+|.+|.. .|.+++. ++ .+-+.|.++||.-.. ... . .++..+.|+
T Consensus 22 ~G~~~a~v~i~~f~D~~Cp~C~~~~~-~~~~~~~-~~~~~~~v~~~~~~~~~~~-----~~~----~----~a~~~~~~~ 86 (175)
T 1z6m_A 22 IGESNAPVKMIEFINVRCPYCRKWFE-ESEELLA-QSVKSGKVERIIKLFDKEK-----ESL----Q----RGNVMHHYI 86 (175)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHHHTTSEEEEEEECCCCS-----TTT----H----HHHHHHTTC
T ss_pred cCCCCCCeEEEEEECCCCcchHHHHH-HHHHHHH-HHhhCCcEEEEEEeCCCCc-----ccH----H----HHHHHHHHH
Confidence 34567799999999999999999964 4666665 45 456888888774211 000 0 122233332
Q ss_pred hhhccCccchhhhhhhhcchhcc---CchhhHHHH-HhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEE
Q 043330 84 INVLKNVNKYYGFIYCIEFLAIE---GRHKDWQTC-FNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWV 159 (225)
Q Consensus 84 i~~~~~~~~~~~fI~C~~~~~~~---~~~~~~~~C-a~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI 159 (225)
.. .+..+++.|..=+...... ........- ++..|+|.+. ...++.+..+....+ ++..+|++
T Consensus 87 ~~--~~~~~~~~~~~~lf~~~~~~~~~~~~~l~~~a~~~~Gld~~~---------~~~~~~~~~~~a~~~--gv~gtPt~ 153 (175)
T 1z6m_A 87 DY--SAPEQALSALHKMFATQDEWGNLTLEEVATYAEKNLGLKEQK---------DATLVSAVIAEANAA--HIQFVPTI 153 (175)
T ss_dssp CT--TCHHHHHHHHHHHHHTHHHHTTSCHHHHHHHHHHTSCCCCCC---------CHHHHHHHHHHHHHH--TCCSSCEE
T ss_pred Hh--cChHHHHHHHHHHHHcChhhccCCHHHHHHHHHHhcCCCccc---------CHHHHHHHHHHHHHc--CCCCcCeE
Confidence 11 2334455555544432100 011222233 4568887641 123334443434443 58999999
Q ss_pred EECCeechh--hHhhHHHHH
Q 043330 160 LVNNQAIRN--DYENFTAYV 177 (225)
Q Consensus 160 ~iNG~~~~~--~~~nl~~~I 177 (225)
+|||+.+.. ..+.|...|
T Consensus 154 vvng~~~~G~~~~~~l~~~i 173 (175)
T 1z6m_A 154 IIGEYIFDESVTEEELRGYI 173 (175)
T ss_dssp EETTEEECTTCCHHHHHHHH
T ss_pred EECCEEccCCCCHHHHHHHh
Confidence 999987642 345565543
No 13
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.67 E-value=0.00012 Score=59.68 Aligned_cols=141 Identities=12% Similarity=0.022 Sum_probs=85.1
Q ss_pred CCceEEEEEEEeCChhhHHHHHHh-hHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhhhcc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKN-LEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAINVLK 88 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~q-L~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~~~~ 88 (225)
..++.|..|+--.||.|.+|-... +.+.+...+.+.+.|.++|+--. . .. .+ ..-+.-.|+... .
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~--~~--------s~-~aa~a~~aA~~~-g 78 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLL--G--PL--------GH-ELTRAWALAMVM-K 78 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSS--S--TT--------HH-HHHHHHHHHHHH-T
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechhc--c--cc--------cH-HHHHHHHHHHHc-C
Confidence 346788899999999999995442 34666545666677777776321 0 00 00 011111233221 1
Q ss_pred Cccchh-hhhhhhcchhccCchhhHHHHHhhc-CCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECCeec
Q 043330 89 NVNKYY-GFIYCIEFLAIEGRHKDWQTCFNTL-GLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNNQAI 166 (225)
Q Consensus 89 ~~~~~~-~fI~C~~~~~~~~~~~~~~~Ca~~~-gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~ 166 (225)
...+.+ .+..=+...............+... |+|.+.+.+|.++......+.+..+....+ ++.-+|+++|||++.
T Consensus 79 ~~~~~~~~lf~a~~~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~GtPt~~vng~~~ 156 (189)
T 3l9v_A 79 ETDVIEKAFFTAGMVEKRLHSPDDVRRVFMSATGISRGEYDRSIKSPAVNDMVALQERLFKEY--GVRGTPSVYVRGRYH 156 (189)
T ss_dssp CHHHHHHHHHHHHTTTCCCCSHHHHHHHHHHHHCCCHHHHHHHTTSHHHHHHHHHHHHHHHHT--TCCSSSEEEETTTEE
T ss_pred cHHHHHHHHHHHHhhhccCCCHHHHHHHHHHccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHh--CCCccCEEEECCEEE
Confidence 111111 1111111110012344567889999 999999999999988888888777766665 589999999999753
No 14
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=97.66 E-value=0.00018 Score=58.89 Aligned_cols=165 Identities=12% Similarity=0.130 Sum_probs=96.9
Q ss_pred CceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc-ceEEEEEEEeeeeeecCC-------------------CCeeecC-
Q 043330 11 GNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS-IINLRLVPWGDANISKSN-------------------NACICKH- 69 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~-~vdl~lvP~G~a~~~~~~-------------------~~~~CqH- 69 (225)
++|+|++|+.-.||.|.. ..++.+.+.. +.+ -++|+++||+-......+ .++.-..
T Consensus 6 ~~~~I~~f~D~~CP~C~~--~~~~~~~l~~-~~~~~v~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~a~~~g~~~~~~ 82 (216)
T 2in3_A 6 EKPVLWYIADPMCSWCWG--FAPVIENIRQ-EYSAFLTVKIMPGGLRPGTNTPLLPEKRAQILHHWHSVHITTGQPFTFE 82 (216)
T ss_dssp CCCEEEEEECTTCHHHHH--HHHHHHHHHH-HHTTTCEEEEEECC----CCSBCCHHHHHHHHHHHHHHHHHHCCCCCCT
T ss_pred cceeEEEEECCCCchhhc--chHHHHHHHh-cCCCCeEEEEeecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCccChH
Confidence 358999999999999983 3445555552 323 489999998743221100 0000000
Q ss_pred --ChhhhccChhhhhhhhh-ccCc--cchhhhhhhhcchhc-c----CchhhHHHHHhhcCCCcccccccccCCchhHHH
Q 043330 70 --GPDECLLNEVEACAINV-LKNV--NKYYGFIYCIEFLAI-E----GRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLL 139 (225)
Q Consensus 70 --G~~EC~gN~iqaC~i~~-~~~~--~~~~~fI~C~~~~~~-~----~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll 139 (225)
-+..=..|...++.+-. .... .+.++|..=+..... . .........+++.|+|.+.+.+|.++.+....+
T Consensus 83 ~~~~~~~~~~s~~a~r~~~~a~~~~~~~~~~~~~~lf~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v 162 (216)
T 2in3_A 83 NALPEGFIYDTEPACRGVVSVSLIEPEKVFPFFAAIQRAFYVGQEDVAQLAILKKLAVDLGIPESRFTPVFQSDEAKQRT 162 (216)
T ss_dssp TCSCTTCBCCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTTCCCTTSHHHHHHHHHHTTCCHHHHHHHHHSHHHHHHH
T ss_pred HHccCCcccCcHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcchHHHHHH
Confidence 01111234444443211 1111 455666666654221 1 123456788999999999999999988887777
Q ss_pred HHHHHhhccCCCCCceeeEEEE--CCee---ch--hhHhhHHHHHHHh
Q 043330 140 LQHAYETSHLIPPHTILPWVLV--NNQA---IR--NDYENFTAYVCRA 180 (225)
Q Consensus 140 ~~~~~~T~~l~P~~~~VPwI~i--NG~~---~~--~~~~nl~~~IC~~ 180 (225)
.+..+....+ ++.-+||++| ||+. .. ...+.|...|=..
T Consensus 163 ~~~~~~a~~~--gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 163 LAGFQRVAQW--GISGFPALVVESGTDRYLITTGYRPIEALRQLLDTW 208 (216)
T ss_dssp HHHHHHHHHT--TCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHc--CCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHH
Confidence 7776666665 6899999998 9985 22 2345666655443
No 15
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=97.57 E-value=0.00049 Score=56.21 Aligned_cols=147 Identities=10% Similarity=0.066 Sum_probs=88.9
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhhhc--
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAINVL-- 87 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~~~-- 87 (225)
..+|+|.+|..=.||+|.+|. ..+.+.+.....+.|.|.+.+|--. -|.... ....+++...
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~-~~~~~~l~~~~~g~v~~v~r~~p~~-----------~h~~s~----~aaraa~aa~~~ 76 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAF-FKLDDLLAQAGEDNVTVRIRLQSQP-----------WHMFSG----VIVRCILAAATL 76 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHH-TTHHHHHHHHCTTTEEEEEEECCCT-----------TSTTHH----HHHHHHHHHTTS
T ss_pred CCCEEEEEEECCCCHhHHHHH-HHHHHHHHHhCCCCEEEEEEEcCCC-----------CCccHH----HHHHHHHHHHHh
Confidence 578999999999999999995 4577777632255677777665311 021110 1112222111
Q ss_pred -cCccchhhhhhhhcchhcc--------------CchhhHHHHHhhcCCCcccccccccCCchhHHHHHHHHhhccCCCC
Q 043330 88 -KNVNKYYGFIYCIEFLAIE--------------GRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPP 152 (225)
Q Consensus 88 -~~~~~~~~fI~C~~~~~~~--------------~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~ 152 (225)
+...++++|..-++..... +.......-++..|+|.+.+ .++.+-..-+.+..+...++ +
T Consensus 77 ~~~~~~f~~~~~aLf~~q~~~~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~---l~~~~~~~~v~~~~~~a~~~--G 151 (182)
T 3gn3_A 77 EGGKESAKAVMTAVASHREEFEFEHHAGGPNLDATPNDIIARIERYSGLALAEA---FANPELEHAVKWHTKYARQN--G 151 (182)
T ss_dssp TTHHHHHHHHHHHHHHTGGGGSCBTTTBSGGGGCCHHHHHHHHHHHHTCCCHHH---HHCGGGHHHHHHHHHHHHHH--T
T ss_pred ccChHHHHHHHHHHHhcCcccccccccccccCCCCHHHHHHHHHHHhCCCHHHH---hcChHHHHHHHHHHHHHHHC--C
Confidence 1114678888777654210 11234567788899998765 45555555555544444444 6
Q ss_pred CceeeEEEECCeech-----hhHhhHHHHH
Q 043330 153 HTILPWVLVNNQAIR-----NDYENFTAYV 177 (225)
Q Consensus 153 ~~~VPwI~iNG~~~~-----~~~~nl~~~I 177 (225)
+.-+|+++|||+.+. ...+++.+.|
T Consensus 152 V~gtPtf~ing~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 152 IHVSPTFMINGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp CCSSSEEEETTEECTTCCTTSCHHHHHHHH
T ss_pred CCccCEEEECCEEccCCCCCCCHHHHHHHh
Confidence 899999999999863 2355665543
No 16
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=97.52 E-value=0.00034 Score=57.28 Aligned_cols=159 Identities=10% Similarity=-0.003 Sum_probs=97.2
Q ss_pred eEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEe---eeeee--cCCC----------------------Ce
Q 043330 13 VNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWG---DANIS--KSNN----------------------AC 65 (225)
Q Consensus 13 V~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G---~a~~~--~~~~----------------------~~ 65 (225)
++|++|+.-.||+|..+. ..|..+.. ... ++|++.||- ..... .... ++
T Consensus 1 m~I~~~~D~~CP~cy~~~-~~l~~~~~-~~~--~~v~~~p~~L~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~a~~~G~ 76 (203)
T 2imf_A 1 MIVDFYFDFLSPFSYLAN-QRLSKLAQ-DYG--LTIRYNAIDLARVKIAIGNVGPSNRDLKVKLDYLKVDLQRWAQLYGI 76 (203)
T ss_dssp CEEEEEECTTCHHHHHHH-HHHHHHHH-HHC--CEEEEEECCHHHHHHHHTCCSCCGGGCHHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEeCCCHHHHHHH-HHHHHHHH-HcC--CeEEEEeeecchhhHhhCCCCcccccChHHHHHHHHHHHHHHHHcCC
Confidence 579999999999997773 44555555 232 788888882 11000 0000 01
Q ss_pred eecCChhhhccChhhhhhhhhc-cCccchhhhhhhhcchhc-c----CchhhHHHHHhhcCCCcccccccccCCchhHHH
Q 043330 66 ICKHGPDECLLNEVEACAINVL-KNVNKYYGFIYCIEFLAI-E----GRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLL 139 (225)
Q Consensus 66 ~CqHG~~EC~gN~iqaC~i~~~-~~~~~~~~fI~C~~~~~~-~----~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll 139 (225)
.-.. +. ..|...++.+-.. ....+.++|..=+..... . +........+.+.|+|.+.+.+|.++.+....+
T Consensus 77 ~~~~-~~--~~~t~~a~r~~~~a~~~g~~~~~~~~lf~a~~~~~~~i~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~~v 153 (203)
T 2imf_A 77 PLVF-PA--NYNSRRMNIGFYYSGAEAQAAAYVNVVFNAVWGEGIAPDLESLPALVSEKLGWDRSAFEHFLSSNAATERY 153 (203)
T ss_dssp CCCC-CS--CCCCHHHHHHGGGCCSHHHHHHHHHHHHHHHHHSCCCTTCTTHHHHHHHHHTCCHHHHHHHHHSHHHHHHH
T ss_pred CCCC-CC--CCChHHHHHHHHHHhCcChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcCCCHHHHHHHhcCHHHHHHH
Confidence 1011 11 4555555533222 223345566555544321 1 123456788999999999999999988888888
Q ss_pred HHHHHhhccCCCCCceeeEEEECCeech--hhHhhHHHHHHHh
Q 043330 140 LQHAYETSHLIPPHTILPWVLVNNQAIR--NDYENFTAYVCRA 180 (225)
Q Consensus 140 ~~~~~~T~~l~P~~~~VPwI~iNG~~~~--~~~~nl~~~IC~~ 180 (225)
.+..+....+ ++.-+||++|||+... +.++.|...+-..
T Consensus 154 ~~~~~~a~~~--Gv~G~Ptfvi~g~~~~G~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 154 DEQTHAAIER--KVFGVPTMFLGDEMWWGNDRLFMLESAMGRL 194 (203)
T ss_dssp HHHHHHHHHT--TCCSSSEEEETTEEEESGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHC--CCCcCCEEEECCEEEECCCCHHHHHHHHhcc
Confidence 7776666655 6899999999998653 3455666665543
No 17
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.50 E-value=0.00025 Score=58.16 Aligned_cols=139 Identities=13% Similarity=0.062 Sum_probs=84.0
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHh-hHHHHhhccccceEEEEEEEeeeeeecCCC--CeeecCChhhhccC--hhhhhh
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKN-LEGVFNNDLISIINLRLVPWGDANISKSNN--ACICKHGPDECLLN--EVEACA 83 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~q-L~p~~~~~l~~~vdl~lvP~G~a~~~~~~~--~~~CqHG~~EC~gN--~iqaC~ 83 (225)
...+|.|..|+--.||.|.+|-... ..|.|...+.+-+.|.++|+--........ .+. -.+|.|. +.+.=+
T Consensus 19 ~~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~~~~~~s~~aa~a~~----aA~~~g~~~~~~~~l 94 (191)
T 3l9s_A 19 VAGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEFLGPLGKELTQAWA----VAMALGVEDKVTVPL 94 (191)
T ss_dssp CCSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECSSSSTTHHHHHHHHH----HHHHHTCHHHHHHHH
T ss_pred CCCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecccccccCHHHHHHHH----HHHHcCcHHHHHHHH
Confidence 3458899999999999999995331 135555456666777777763210000000 000 0122221 111101
Q ss_pred hhhccCccchhhhhhhhcchhccCchhhHHHHHhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECC
Q 043330 84 INVLKNVNKYYGFIYCIEFLAIEGRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNN 163 (225)
Q Consensus 84 i~~~~~~~~~~~fI~C~~~~~~~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG 163 (225)
.+. =+.... .........-+...|+|.+.+.+|.++......+.+..+...++ ++.-+|+++|||
T Consensus 95 f~a------------~~~~~~-~~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~gtPtfvvnG 159 (191)
T 3l9s_A 95 FEA------------VQKTQT-VQSAADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAAADL--QLQGVPAMFVNG 159 (191)
T ss_dssp HHH------------HHTSCC-CSSHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHT--TCCSSSEEEETT
T ss_pred HHH------------HHhcCC-CCCHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHh--CCcccCEEEECC
Confidence 110 011111 12344567789999999999999999988888888777777665 589999999999
Q ss_pred eec
Q 043330 164 QAI 166 (225)
Q Consensus 164 ~~~ 166 (225)
++.
T Consensus 160 ~~~ 162 (191)
T 3l9s_A 160 KYQ 162 (191)
T ss_dssp TEE
T ss_pred EEE
Confidence 863
No 18
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.50 E-value=0.00014 Score=58.29 Aligned_cols=66 Identities=12% Similarity=0.104 Sum_probs=48.2
Q ss_pred hhHHHH----HhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECCeec-h----hhHhhHHHHH
Q 043330 110 KDWQTC----FNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNNQAI-R----NDYENFTAYV 177 (225)
Q Consensus 110 ~~~~~C----a~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~-~----~~~~nl~~~I 177 (225)
...... +++.|+|.+.+.+|.++......+.+..+....+ ++..+||++|||+.. . ...+.|...|
T Consensus 115 ~~l~~~~~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~--gv~gtPt~~ing~~~~~~~g~~~~~~l~~~i 189 (195)
T 3c7m_A 115 KDPAAFIKTGLDAAGMSQADFEAALKEPAVQETLEKWKASYDVA--KIQGVPAYVVNGKYLIYTKSIKSIDAMADLI 189 (195)
T ss_dssp TCHHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHGGGHHHHH--HHHCSSEEEETTTEEECGGGCCCHHHHHHHH
T ss_pred HHHHHHHHhHHHHcCCCHHHHHHHHcChHHHHHHHHHHHHHHHc--CCCccCEEEECCEEEeccCCCCCHHHHHHHH
Confidence 356678 8899999999999999887777776665554444 579999999999852 2 1345666554
No 19
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=97.25 E-value=0.002 Score=52.82 Aligned_cols=165 Identities=10% Similarity=0.057 Sum_probs=97.5
Q ss_pred eEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCC-C------------------CeeecCChh-
Q 043330 13 VNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSN-N------------------ACICKHGPD- 72 (225)
Q Consensus 13 V~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~-~------------------~~~CqHG~~- 72 (225)
++|++|+.-.||.|-.+ ...|..+.. .+.+-++|+++||+-......+ + ++.-...+.
T Consensus 3 ~~I~~~~D~~CP~cy~~-~~~l~~l~~-~~~~~v~v~~~p~~L~~~~~~~~~~~~~~~~~~~~~r~a~~~G~~f~~~~~~ 80 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGY-KPTIEKLKQ-QLPGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFWK 80 (208)
T ss_dssp EEEEEEECTTCHHHHHH-HHHHHHHHH-HSCTTSEEEEEECCSSCSCCCBCCHHHHHHHHHHHHHHHHHHCCCCCTTHHH
T ss_pred eEEEEEECCCCchhhhh-hHHHHHHHH-hCCCCceEEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCcccHHHHh
Confidence 68999999999999755 344555555 4667799999998742211000 0 000111000
Q ss_pred --hhccChhhhhhhhh-ccCccchhhhhhhhcchhc-----cCchhhHHHHHhhcCCCcccccccccCCchhHHHHHHHH
Q 043330 73 --ECLLNEVEACAINV-LKNVNKYYGFIYCIEFLAI-----EGRHKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAY 144 (225)
Q Consensus 73 --EC~gN~iqaC~i~~-~~~~~~~~~fI~C~~~~~~-----~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~ 144 (225)
.=..|...++-+-. .......++|..=+..... ..........+.+.|+|.+.+.+|.++......+.+..+
T Consensus 81 ~~~~~~~s~~a~r~~~aa~~~g~~~~~~~~l~~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~ 160 (208)
T 3kzq_A 81 LCTPVRSTYQSCRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMDGTLLEGVFQDQLS 160 (208)
T ss_dssp HSCCBCCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHH
T ss_pred cCCCcCCcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHH
Confidence 00124334432211 1122234555555543221 122345678899999999999999999888888888777
Q ss_pred hhccCCCCCceeeEEEEC--Ceech-----hhHhhHHHHHHHhh
Q 043330 145 ETSHLIPPHTILPWVLVN--NQAIR-----NDYENFTAYVCRAY 181 (225)
Q Consensus 145 ~T~~l~P~~~~VPwI~iN--G~~~~-----~~~~nl~~~IC~~y 181 (225)
....+ ++.-+||++|| |+... ...+.|.+.|=...
T Consensus 161 ~a~~~--gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 161 LAKSL--GVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHT--TCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHc--CCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 77765 68999999996 44321 23455665554443
No 20
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=97.10 E-value=0.0032 Score=53.39 Aligned_cols=167 Identities=10% Similarity=0.064 Sum_probs=104.3
Q ss_pred ceEEEEEEEeCChhhHHHHHHhhHHHHhhccc--cceEEEEEEEeeeeeecCCC--------------------------
Q 043330 12 NVNLSVYYETLSPTCSNFIVKNLEGVFNNDLI--SIINLRLVPWGDANISKSNN-------------------------- 63 (225)
Q Consensus 12 kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~--~~vdl~lvP~G~a~~~~~~~-------------------------- 63 (225)
|++|++|+.-.||.|--. ...|..+.. .+. .-++|++.||.-.-.....+
T Consensus 2 ~~~I~~~~D~~cPwcyig-~~~l~~a~~-~~~~~~~v~v~~~P~~L~p~~~~~g~~~~~~~~~~k~g~~~~~~~~~~~~~ 79 (239)
T 3gl5_A 2 HMRVEIWSDIACPWCYVG-KARFEKALA-AFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNL 79 (239)
T ss_dssp CEEEEEEECSSCHHHHHH-HHHHHHHHH-TCTTGGGEEEEEEECCSCTTCCTTCCEEHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CeEEEEEEeCcCHhHHHH-HHHHHHHHH-hcCccCceEEEEEEeccccCCCCCCCCCHHHHHHHhhCCCHHHHHHHHHHH
Confidence 689999999999999544 344666655 343 46999999995211100000
Q ss_pred -------CeeecCChhhhccChhhhhhhhhc-cCccchhhhhhhhcchhc-----cCc-hhhHHHHHhhcCCCccccccc
Q 043330 64 -------ACICKHGPDECLLNEVEACAINVL-KNVNKYYGFIYCIEFLAI-----EGR-HKDWQTCFNTLGLPAKPVLDC 129 (225)
Q Consensus 64 -------~~~CqHG~~EC~gN~iqaC~i~~~-~~~~~~~~fI~C~~~~~~-----~~~-~~~~~~Ca~~~gld~~~I~~C 129 (225)
++.=...+ -=..|...++-+-.. ....+.+.|+.=+..... -+. .......+.+.|+|.+.+.++
T Consensus 80 ~r~a~~~Gl~f~~~~-~~~~nt~~a~r~~~~A~~~g~~~~~~~alf~a~~~~g~~i~d~~~~L~~~a~~~Gld~~~~~~~ 158 (239)
T 3gl5_A 80 GAQAAAEGLAYRTRD-RDHGSTFDLHRLLHLAKERGRHEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAV 158 (239)
T ss_dssp HHHHHHTTCCCCCSS-CEECCCHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCSSCCSSCHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHcCCCccCCC-CCCCChHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCHHHHHHH
Confidence 11111110 012455555533221 222345555555543321 123 455778899999999999999
Q ss_pred ccC-CchhHHHHHHHHhhccCCCCCceeeEEEECCee-ch--hhHhhHHHHHHHhhcC
Q 043330 130 YKS-GNGTKLLLQHAYETSHLIPPHTILPWVLVNNQA-IR--NDYENFTAYVCRAYKG 183 (225)
Q Consensus 130 ~~s-~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~-~~--~~~~nl~~~IC~~y~g 183 (225)
.++ ......+.+..+....+ ++.-|||++|||++ +. ...+.|...|=.....
T Consensus 159 l~s~~~~~~~v~~~~~~a~~~--Gv~GvPtfvv~g~~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 159 LADPAAYADEVRADEREAAQL--GATGVPFFVLDRAYGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHCTTTTHHHHHHHHHHHHHT--TCCSSSEEEETTTEEEESSCCHHHHHHHHHHHHHT
T ss_pred HcCcHhHHHHHHHHHHHHHHC--CCCeeCeEEECCcEeecCCCCHHHHHHHHHHHHhh
Confidence 999 88888888777776665 58999999999974 32 2466777777666654
No 21
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=96.66 E-value=0.0039 Score=51.06 Aligned_cols=160 Identities=11% Similarity=0.066 Sum_probs=96.3
Q ss_pred CceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEE--eeeeeec--C-C--------------------CCe
Q 043330 11 GNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPW--GDANISK--S-N--------------------NAC 65 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~--G~a~~~~--~-~--------------------~~~ 65 (225)
.+++|++|+.-.||.|--. ...|..+.. .. -++|++.|| |...... . . .++
T Consensus 3 ~~~~I~~~~D~~cPwcyi~-~~~l~~~~~-~~--~~~v~~~p~~L~~~~~~~g~~~~~~~~~k~~~~~~~~~r~a~~~G~ 78 (202)
T 3fz5_A 3 AMNPIEFWFDFSSGYAFFA-AQRIEALAA-EL--GRTVLWRPYMLGAAFSVTGARGLSSTPLKRDYAQRDWARIARQRGL 78 (202)
T ss_dssp CCSCEEEEECTTCHHHHHH-HTTHHHHHH-HH--TCCEEEEECTTC----------CCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCceeEEEEeCCCHHHHHH-HHHHHHHHH-Hh--CCeEEEEeeeccchhhhcCCCCcccCcHHHHHHHHHHHHHHHHhCC
Confidence 4678999999999999544 344555544 22 378999998 3211100 0 0 011
Q ss_pred eecCChhhhccChhhhhhhhhc-cCc--cchhhhhhhhcchhc-----cCchhhHHHHHhhcCCCcccccccccCCchhH
Q 043330 66 ICKHGPDECLLNEVEACAINVL-KNV--NKYYGFIYCIEFLAI-----EGRHKDWQTCFNTLGLPAKPVLDCYKSGNGTK 137 (225)
Q Consensus 66 ~CqHG~~EC~gN~iqaC~i~~~-~~~--~~~~~fI~C~~~~~~-----~~~~~~~~~Ca~~~gld~~~I~~C~~s~~G~~ 137 (225)
.-.. +.-=..|...++-+-.. ... .+..+|+.=+..... .+........+.+.|+|.+.+.++.++.+...
T Consensus 79 ~f~~-~~~~~~~t~~a~r~~~~a~~~g~~~~~~~~~alf~a~~~~g~~i~~~~~L~~~a~~~Gld~~~~~~~~~s~~~~~ 157 (202)
T 3fz5_A 79 TFRP-PADHPHVALAATRAFYWIEAQSPDAATAFAQRVFDLYFSDRLDTASPEAVSRLGPEVGLEPEALLAGIADPALKE 157 (202)
T ss_dssp CCCC-CTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTCCCTTCHHHHHTTHHHHTCCHHHHHHHTTCHHHHH
T ss_pred CCCC-CCCCCCChHHHHHHHHHHHhhCchHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcCHHHHH
Confidence 1111 11112355555532221 111 245556555544321 12234567889999999999999999999888
Q ss_pred HHHHHHHhhccCCCCCceeeEEEECCeech--hhHhhHHHHH
Q 043330 138 LLLQHAYETSHLIPPHTILPWVLVNNQAIR--NDYENFTAYV 177 (225)
Q Consensus 138 Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~--~~~~nl~~~I 177 (225)
.+.+..++...+ ++.-|||++|||+... +.++.|...+
T Consensus 158 ~v~~~~~~a~~~--Gv~GvPtfvv~g~~~~G~~~~~~l~~~l 197 (202)
T 3fz5_A 158 TVRKIGEDAVAR--GIFGSPFFLVDDEPFWGWDRMEMMAEWI 197 (202)
T ss_dssp HHHHHHHHHHHT--TCCSSSEEEETTEEEESGGGHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCCcCCEEEECCEEEecCCCHHHHHHHH
Confidence 888887777766 6899999999998653 3455555554
No 22
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=96.36 E-value=0.013 Score=48.57 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=55.0
Q ss_pred hhhHHHHHhhcCCCc---ccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEEC----Ceech--hhHhhHHHHHHH
Q 043330 109 HKDWQTCFNTLGLPA---KPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVN----NQAIR--NDYENFTAYVCR 179 (225)
Q Consensus 109 ~~~~~~Ca~~~gld~---~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN----G~~~~--~~~~nl~~~IC~ 179 (225)
.......+.+.|+|. +.+.+|.++.+....+.+..+....+ ++.-|||++|| |+... +.++.|...+=.
T Consensus 135 ~~~L~~~a~~~Gl~~~d~~~~~~~~~s~~~~~~v~~~~~~a~~~--gv~G~Ptfvv~~~g~~~~~~G~~~~~~l~~~l~~ 212 (226)
T 1r4w_A 135 SQNILSAAEKAGMATAQAQHLLNKISTELVKSKLRETTGAACKY--GAFGLPTTVAHVDGKTYMLFGSDRMELLAYLLGE 212 (226)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHT--TCCSSCEEEEEETTEEEEEESTTCHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHcCCHHHHHHHHHHHHHHHHC--CCCCCCEEEEeCCCCcCceeCCCcHHHHHHHhcC
Confidence 345678899999964 47778888888888887777766665 68999999999 76542 335666666666
Q ss_pred hhcCCCCC
Q 043330 180 AYKGNVVP 187 (225)
Q Consensus 180 ~y~g~~~P 187 (225)
.+.| +.|
T Consensus 213 ~~~~-~~~ 219 (226)
T 1r4w_A 213 KWMG-PVP 219 (226)
T ss_dssp CCCC-SSC
T ss_pred cccC-CCC
Confidence 6666 444
No 23
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.21 E-value=0.011 Score=47.78 Aligned_cols=145 Identities=10% Similarity=0.067 Sum_probs=81.2
Q ss_pred CceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEeeeeeecCCCCeeecCChhhhccChhhhhhhhhccCc
Q 043330 11 GNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWGDANISKSNNACICKHGPDECLLNEVEACAINVLKNV 90 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G~a~~~~~~~~~~CqHG~~EC~gN~iqaC~i~~~~~~ 90 (225)
+++.|..|+--.||.|.+|- . ..+-|..++ + +.|..+|... |+..+ ..-+.-..+-.... .
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~-~-~~~~~~~~~-~-v~~~~~p~~~-------------~~~~~-~aa~a~~Aa~~q~g-~ 82 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNME-N-FLPVISQEA-G-TDIGKMHITF-------------NQSAH-IASMFYYAAEMQVD-G 82 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHG-G-GHHHHHHHH-T-SCCEEEECCS-------------SSHHH-HHHHHHHHHHTTSS-S
T ss_pred CCCEEEEEECCCChhHHHhh-H-HHHHHHHHh-C-CeEEEEeccC-------------Cccch-HHHHHHHHHHHHhC-C
Confidence 67899999999999999993 3 333333234 3 5566666421 11111 00011111111111 0
Q ss_pred cchhhhhhhhcchhcc-------CchhhHHHHHhhcCC-CcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEEC
Q 043330 91 NKYYGFIYCIEFLAIE-------GRHKDWQTCFNTLGL-PAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVN 162 (225)
Q Consensus 91 ~~~~~fI~C~~~~~~~-------~~~~~~~~Ca~~~gl-d~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN 162 (225)
...++|..=+...... .........+.+.|+ |.+.+.++..+ .....+.+..+....+ +++.+|+++||
T Consensus 83 ~~~~~~~~~lf~a~~~~~~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~-~~~~~v~~~~~~a~~~--gv~GtPtfvvn 159 (185)
T 3feu_A 83 APDHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRD-TLIKKVDNAKMLSEKS--GISSVPTFVVN 159 (185)
T ss_dssp SCCHHHHHHHHHHHTCCTTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHH-HHHHHHHHHHHHHHHH--TCCSSSEEEET
T ss_pred chHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHc--CCCccCEEEEC
Confidence 0123343333322110 123346678999998 99999999876 4455555565555555 58999999999
Q ss_pred Ceec---h--hhHhhHHHHH
Q 043330 163 NQAI---R--NDYENFTAYV 177 (225)
Q Consensus 163 G~~~---~--~~~~nl~~~I 177 (225)
|++. . ...+.|..+|
T Consensus 160 g~~~v~~~Ga~~~e~~~~~i 179 (185)
T 3feu_A 160 GKYNVLIGGHDDPKQIADTI 179 (185)
T ss_dssp TTEEECGGGCSSHHHHHHHH
T ss_pred CEEEEecCCCCCHHHHHHHH
Confidence 9863 1 2355666555
No 24
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=96.13 E-value=0.042 Score=46.13 Aligned_cols=170 Identities=14% Similarity=0.054 Sum_probs=95.3
Q ss_pred CceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEE--eeeeee---cCCC--------------------Ce
Q 043330 11 GNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPW--GDANIS---KSNN--------------------AC 65 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~--G~a~~~---~~~~--------------------~~ 65 (225)
.+++|++|+.-.||.|--.. ..|..+.. .+ -++|++.|| |..... .... ++
T Consensus 4 ~~~~I~~~~D~~CPwcyi~~-~~L~~~~~-~~--~v~v~~~p~~L~~~~~~~g~~~~~~~~~k~~y~~~~~~r~a~~~G~ 79 (234)
T 3rpp_A 4 LPRTVELFYDVLSPYSWLGF-EILCRYQN-IW--NINLQLRPSLITGIMKDSGNKPPGLLPRKGLYMANDLKLLRHHLQI 79 (234)
T ss_dssp CCEEEEEEECTTCHHHHHHH-HHHHHHTT-TS--SEEEEEEECCHHHHCC----CCCSSSCHHHHHHHHHHHHHHHHHTC
T ss_pred CCceEEEEEeCCCHHHHHHH-HHHHHHHH-Hc--CCeEEEEEeecchhhhhcCCCCcccChHHHHHHHHHHHHHHHHhCC
Confidence 56899999999999995442 33443333 22 388999998 311000 0000 11
Q ss_pred eecCCh--h--hhccChhhhhhhhhc-c--Cccchhhhhhhhcchhc-----cCchhhHHHHHhhcCCCc---ccccccc
Q 043330 66 ICKHGP--D--ECLLNEVEACAINVL-K--NVNKYYGFIYCIEFLAI-----EGRHKDWQTCFNTLGLPA---KPVLDCY 130 (225)
Q Consensus 66 ~CqHG~--~--EC~gN~iqaC~i~~~-~--~~~~~~~fI~C~~~~~~-----~~~~~~~~~Ca~~~gld~---~~I~~C~ 130 (225)
.-...+ . .-..|.+.++-+-.. . ...+...|+.=+..... -+........+.+.|+|. +.+.+-.
T Consensus 80 ~f~~~~~~~~~~~~~nt~~a~r~~~aa~~~~~~~~~~~~~al~~A~~~~g~di~d~~~L~~~a~~~GLd~~~~~~~l~~~ 159 (234)
T 3rpp_A 80 PIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRELWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKI 159 (234)
T ss_dssp CCCCCSSCHHHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHHHHHHTTT
T ss_pred CCCCCCCCcccccCCCCHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence 111100 0 001144444432211 1 12334455444432211 123456778999999999 4555556
Q ss_pred cCCchhHHHHHHHHhhccCCCCCceeeEEEEC--Ce-e-c--hhhHhhHHHHHHHhhcCCCCC
Q 043330 131 KSGNGTKLLLQHAYETSHLIPPHTILPWVLVN--NQ-A-I--RNDYENFTAYVCRAYKGNVVP 187 (225)
Q Consensus 131 ~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iN--G~-~-~--~~~~~nl~~~IC~~y~g~~~P 187 (225)
++.+..+.+.+..++..++ ++.-|||++|| |+ . . .+.+..|...+=..+.| +.|
T Consensus 160 ~s~~~~~~l~~~~~~a~~~--Gv~GvPtfvv~~~g~~~~f~G~drl~~l~~~L~~~~~~-p~~ 219 (234)
T 3rpp_A 160 ATPKVKNQLKETTEAACRY--GAFGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMG-PIP 219 (234)
T ss_dssp TSHHHHHHHHHHHHHHHHT--TCSSSCEEEEEETTEEEEEESSSCHHHHHHHHTCCCCC-SSC
T ss_pred cCHHHHHHHHHHHHHHHHc--CCCCCCEEEEeCCCCcCceeCccCHHHHHHHhccccCC-CCC
Confidence 7888888888887777766 68999999995 74 2 2 23466666666556666 555
No 25
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=93.53 E-value=0.042 Score=45.12 Aligned_cols=56 Identities=16% Similarity=0.162 Sum_probs=46.7
Q ss_pred hhhHHHHHhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECCeec
Q 043330 109 HKDWQTCFNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNNQAI 166 (225)
Q Consensus 109 ~~~~~~Ca~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~ 166 (225)
.......+...|+|.+.+.+|.++......+.+.......+ +++.||+++|||++.
T Consensus 6 ~~~L~~~a~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~--gi~gvP~fvingk~~ 61 (197)
T 1un2_A 6 ASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADV--QLRGVPAMFVNGKYQ 61 (197)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHHHHHHHHT--TCCSSSEEEETTTEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHc--CCCcCCEEEEcceEe
Confidence 44566789999999999999999998888888777766665 578899999999864
No 26
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=89.45 E-value=0.49 Score=39.55 Aligned_cols=44 Identities=20% Similarity=0.342 Sum_probs=34.1
Q ss_pred CCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEe
Q 043330 7 PAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWG 54 (225)
Q Consensus 7 ~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G 54 (225)
.....++.|.+|+--.||+|++|.. +|.+.++ . +.+.|.++||.
T Consensus 93 G~~~ak~~v~~F~D~~Cp~C~~~~~-~l~~~~~-~--g~v~v~~~~~p 136 (241)
T 1v58_A 93 GKKDAPVIVYVFADPFCPYCKQFWQ-QARPWVD-S--GKVQLRTLLVG 136 (241)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHH-HHHHHHH-T--TSEEEEEEECC
T ss_pred CCCCCCeEEEEEECCCChhHHHHHH-HHHHHHh-C--CcEEEEEEECC
Confidence 3456789999999999999999964 4677665 2 35778888874
No 27
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=81.28 E-value=2.2 Score=33.16 Aligned_cols=40 Identities=13% Similarity=0.303 Sum_probs=28.3
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEe
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWG 54 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G 54 (225)
....++.|.+|..-.||+|++|.. .+. ++.+ +.|.++.|.
T Consensus 11 ~~~a~~~vv~f~D~~Cp~C~~~~~-----~l~-~l~~-v~v~~~~~P 50 (147)
T 3gv1_A 11 RGNGKLKVAVFSDPDCPFCKRLEH-----EFE-KMTD-VTVYSFMMP 50 (147)
T ss_dssp ETTCCEEEEEEECTTCHHHHHHHH-----HHT-TCCS-EEEEEEECC
T ss_pred cCCCCEEEEEEECCCChhHHHHHH-----HHh-hcCc-eEEEEEEcc
Confidence 356789999999999999999843 344 4533 566655544
No 28
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=81.01 E-value=1.5 Score=38.11 Aligned_cols=40 Identities=18% Similarity=0.363 Sum_probs=32.0
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEe
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWG 54 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G 54 (225)
...+..|.+|..-.||+|+++. .+|.+.++ + ++|++++|+
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~-~~l~~~l~-~----~~Vr~i~~P 184 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKEL-TKLRDHLK-E----NTVRMVVVG 184 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHH-HTHHHHHH-H----CEEEEEECC
T ss_pred CCCCeEEEEEECcCChhHHHHH-HHHHHHhh-C----CcEEEEEee
Confidence 3577899999999999999995 45777665 2 778888876
No 29
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=80.34 E-value=3.3 Score=30.49 Aligned_cols=47 Identities=13% Similarity=0.157 Sum_probs=32.9
Q ss_pred CCCCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 3 EASLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 3 ~~~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
.-+++.-..|+.|-.|+-+-||.|+..+ ..|..+++ ++.+. ++++|-
T Consensus 24 ~~~l~~~~gk~vll~F~a~wC~~C~~~~-~~l~~l~~-~~~~~-~~~vv~ 70 (143)
T 4fo5_A 24 KASFHNQLGRYTLLNFWAAYDAESRARN-VQLANEVN-KFGPD-KIAMCS 70 (143)
T ss_dssp CCCSCCSSCCEEEEEEECTTCHHHHHHH-HHHHHHHT-TSCTT-TEEEEE
T ss_pred EEEHHHhCCCEEEEEEEcCcCHHHHHHH-HHHHHHHH-HhCcC-CEEEEE
Confidence 3456666678889999999999999886 34666666 45543 455553
No 30
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=77.20 E-value=3.3 Score=33.61 Aligned_cols=42 Identities=17% Similarity=0.273 Sum_probs=30.0
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEEe
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPWG 54 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~G 54 (225)
....++.|.+|+-..||+|++|. ..|.++.+ . + +.|.++.|.
T Consensus 83 ~~~~k~~vv~F~d~~Cp~C~~~~-~~l~~~~~-~--~-v~v~~~~~p 124 (211)
T 1t3b_A 83 AKNEKHVVTVFMDITCHYCHLLH-QQLKEYND-L--G-ITVRYLAFP 124 (211)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHH-TTHHHHHH-T--T-EEEEEEECC
T ss_pred CCCCCEEEEEEECCCCHhHHHHH-HHHHHHHh-C--C-cEEEEEECC
Confidence 34678999999999999999995 34555322 1 3 677766554
No 31
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=75.35 E-value=7.5 Score=28.35 Aligned_cols=40 Identities=10% Similarity=0.112 Sum_probs=27.2
Q ss_pred CCCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccc
Q 043330 4 ASLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISI 45 (225)
Q Consensus 4 ~~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~ 45 (225)
.++.....++-|-.||-+-||.|+.+. ..|..+.. .+.+.
T Consensus 44 ~~l~~~~~k~vlv~f~a~wC~~C~~~~-~~~~~~~~-~~~~~ 83 (141)
T 3hxs_A 44 KEWKYLGDKPAIVDFYADWCGPCKMVA-PILEELSK-EYAGK 83 (141)
T ss_dssp CCCCCCCSSCEEEEEECTTCTTHHHHH-HHHHHHHH-HTTTT
T ss_pred hHHHHhCCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HhcCc
Confidence 345555678889999999999999984 23444443 34443
No 32
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=75.28 E-value=5.6 Score=28.27 Aligned_cols=31 Identities=13% Similarity=0.278 Sum_probs=22.1
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
+...+..|.+|+-.-||+|+.. .|+++ ++..
T Consensus 12 ~~~~~~~v~~f~~~~C~~C~~~-----~~~L~-~l~~ 42 (100)
T 1wjk_A 12 SNRALPVLTLFTKAPCPLCDEA-----KEVLQ-PYKD 42 (100)
T ss_dssp SCCCCCEEEEEECSSCHHHHHH-----HHHTS-TTSS
T ss_pred ccCCCCEEEEEeCCCCcchHHH-----HHHHH-Hhhh
Confidence 4456678999999999999765 55555 3443
No 33
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=74.95 E-value=3.2 Score=27.34 Aligned_cols=35 Identities=17% Similarity=0.411 Sum_probs=23.3
Q ss_pred CceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceE
Q 043330 11 GNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIIN 47 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vd 47 (225)
.+|.|.+||-+-||.|+.+.. .|..+.. ++.+.+.
T Consensus 2 ~~~~vv~f~~~~C~~C~~~~~-~l~~~~~-~~~~~~~ 36 (85)
T 1fo5_A 2 SKVKIELFTSPMCPHCPAAKR-VVEEVAN-EMPDAVE 36 (85)
T ss_dssp CCEEEEEEECCCSSCCCTHHH-HHHHHHH-HCSSSEE
T ss_pred CceEEEEEeCCCCCchHHHHH-HHHHHHH-HcCCceE
Confidence 368899999999999998842 3444433 3443333
No 34
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=74.14 E-value=4.3 Score=32.88 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=29.5
Q ss_pred CCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEE
Q 043330 7 PAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPW 53 (225)
Q Consensus 7 ~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~ 53 (225)
.....++.|.+|+-.-||+|++|.. .|..+.+ . -+.|.++.|
T Consensus 82 g~~~~k~~vv~F~d~~Cp~C~~~~~-~l~~l~~-~---~v~v~~~~~ 123 (216)
T 1eej_A 82 KAPQEKHVITVFTDITCGYCHKLHE-QMADYNA-L---GITVRYLAF 123 (216)
T ss_dssp CCTTCCEEEEEEECTTCHHHHHHHT-THHHHHH-T---TEEEEEEEC
T ss_pred cCCCCCEEEEEEECCCCHHHHHHHH-HHHHHHh-C---CcEEEEEEC
Confidence 3456789999999999999999953 3544433 1 366666555
No 35
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=71.28 E-value=4.4 Score=30.46 Aligned_cols=43 Identities=16% Similarity=0.344 Sum_probs=30.5
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
+++....|+.|-.|+-+-||.|+..+ ..|..+++ ++. +++++-
T Consensus 31 ~l~~~~gk~~lv~F~~~~C~~C~~~~-~~l~~l~~-~~~---~v~vv~ 73 (165)
T 3ha9_A 31 SLNNVGGDVVILWFMAAWCPSCVYMA-DLLDRLTE-KYR---EISVIA 73 (165)
T ss_dssp CGGGCCSSEEEEEEECTTCTTHHHHH-HHHHHHHH-HCT---TEEEEE
T ss_pred eHHHhCCCEEEEEEECCCCcchhhhH-HHHHHHHH-HcC---CcEEEE
Confidence 34445678899999999999999986 44666665 455 555553
No 36
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=70.45 E-value=8.6 Score=25.59 Aligned_cols=16 Identities=19% Similarity=0.611 Sum_probs=14.6
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.+|+-+-||+|++.
T Consensus 3 ~~~~f~~~~C~~C~~~ 18 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSA 18 (80)
T ss_dssp EEEEEEECSCHHHHHH
T ss_pred ceEEEeCCCCCchHHH
Confidence 5899999999999877
No 37
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=68.54 E-value=7.5 Score=28.76 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=30.4
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
+++.-..|+.|-.||-+-||.|+..+...|..+++ ++.+. ++.+|
T Consensus 22 ~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~-~~~~~-~v~~v 66 (158)
T 3eyt_A 22 TLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRA-AFPED-KVAVL 66 (158)
T ss_dssp CTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHH-HSCTT-TEEEE
T ss_pred CHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHH-HhCcC-CEEEE
Confidence 45555678888888999999999963345666666 45531 35554
No 38
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=65.98 E-value=4.1 Score=29.59 Aligned_cols=45 Identities=7% Similarity=0.109 Sum_probs=30.0
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
+++....|+.|-.||-+-||.|+..+. .|..+++ ++.+. +++++.
T Consensus 25 ~l~~~~gk~vll~f~~~~C~~C~~~~~-~l~~l~~-~~~~~-~~~~v~ 69 (148)
T 3hcz_A 25 YLYDVQAKYTILFFWDSQCGHCQQETP-KLYDWWL-KNRAK-GIQVYA 69 (148)
T ss_dssp CGGGCCCSEEEEEEECGGGCTTCSHHH-HHHHHHH-HHGGG-TEEEEE
T ss_pred EhHHcCCCEEEEEEECCCCccHHHHHH-HHHHHHH-HhccC-CEEEEE
Confidence 344556788888899999999998853 3555555 34443 355543
No 39
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=65.52 E-value=8.7 Score=27.57 Aligned_cols=42 Identities=17% Similarity=0.487 Sum_probs=28.4
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++. ..++.|-.||-+-||.|+.++ ..|..++. ++.+ -++.++
T Consensus 30 l~~-~gk~~ll~f~~~~C~~C~~~~-~~l~~~~~-~~~~-~~~~~v 71 (145)
T 3erw_A 30 IPN-KGQKTILHFWTSWCPPCKKEL-PQFQSFYD-AHPS-DSVKLV 71 (145)
T ss_dssp ESC-TTSEEEEEEECSSCHHHHHHH-HHHHHHHH-HCCC-SSEEEE
T ss_pred HHH-CCCEEEEEEECCCCHHHHHHH-HHHHHHHH-HcCC-CCEEEE
Confidence 444 678888889999999999975 34666665 4542 134444
No 40
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=64.85 E-value=6.7 Score=29.37 Aligned_cols=45 Identities=18% Similarity=0.197 Sum_probs=29.1
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
+++.-..|+.|-.||-+-||.|+..+. .|..+++ ++.+. ++++|-
T Consensus 29 ~l~~~~gk~vll~F~a~wC~~C~~~~~-~l~~l~~-~~~~~-~~~vv~ 73 (152)
T 2lrt_A 29 SLTDLKGKVVLIDFTVYNNAMSAAHNL-ALRELYN-KYASQ-GFEIYQ 73 (152)
T ss_dssp CTTTGGGSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHGGG-TEEEEE
T ss_pred eHHHhCCCEEEEEEEcCCChhhHHHHH-HHHHHHH-HhccC-CeEEEE
Confidence 344445677888888899999998753 3555555 45443 455543
No 41
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=64.73 E-value=10 Score=27.50 Aligned_cols=45 Identities=20% Similarity=0.334 Sum_probs=28.7
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
+++....|+.|-.|+-+-||.|+.++. .|..+++ ++.+.-+++++
T Consensus 22 ~l~~~~gk~vll~F~a~wC~~C~~~~~-~l~~l~~-~~~~~~~~~vv 66 (144)
T 1o73_A 22 SLGSLVGKTVFLYFSASWCPPCRGFTP-VLAEFYE-KHHVAKNFEVV 66 (144)
T ss_dssp CSGGGTTCEEEEEEECTTCHHHHHHHH-HHHHHHH-HHTTTTTEEEE
T ss_pred cHHHhCCCEEEEEEECcCCHHHHHHHH-HHHHHHH-HhccCCCEEEE
Confidence 344455678888899999999998853 3555555 34421244444
No 42
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=64.16 E-value=4.9 Score=29.06 Aligned_cols=38 Identities=8% Similarity=0.169 Sum_probs=25.9
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEE
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINL 48 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl 48 (225)
...++.|-.||-+-||.|+.++ ..|..+++ ++.+.+.|
T Consensus 27 ~~gk~~lv~f~~~~C~~C~~~~-~~l~~l~~-~~~~~~~~ 64 (148)
T 2b5x_A 27 IGEKPTLIHFWSISCHLCKEAM-PQVNEFRD-KYQDQLNV 64 (148)
T ss_dssp TTTSCEEEEEECTTCHHHHHHH-HHHHHHHH-HHTTTSEE
T ss_pred cCCCEEEEEEEcCCCHHHHHHh-HHHHHHHH-HhcCCcEE
Confidence 3457788888999999999885 33555555 45554333
No 43
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=61.87 E-value=14 Score=26.25 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=22.4
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
....++.|-.||-+-||.|+.+.. .|..+..
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~-~l~~~~~ 53 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQK-ELSYVSK 53 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHH-HHHHHHH
T ss_pred HhCCCcEEEEEECCCCccHHHHHH-HHHHHHH
Confidence 345677888899999999999853 3444444
No 44
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=61.53 E-value=8.5 Score=28.32 Aligned_cols=38 Identities=8% Similarity=0.226 Sum_probs=25.7
Q ss_pred CCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEE
Q 043330 7 PAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRL 50 (225)
Q Consensus 7 ~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~l 50 (225)
.....++-|-.||-+-||.|+.+ .|.+. ++.+..++.+
T Consensus 36 ~~~~~k~vvv~F~a~wC~~C~~~-----~p~l~-~l~~~~~v~~ 73 (133)
T 3cxg_A 36 SSTQNSSIVIKFGAVWCKPCNKI-----KEYFK-NQLNYYYVTL 73 (133)
T ss_dssp TC-CCSEEEEEEECTTCHHHHHT-----HHHHH-GGGGTEECEE
T ss_pred HhcCCCEEEEEEECCCCHHHHHH-----HHHHH-HHHHhcCEEE
Confidence 34456788999999999999985 56666 4544334433
No 45
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=60.68 E-value=19 Score=25.53 Aligned_cols=47 Identities=23% Similarity=0.171 Sum_probs=26.0
Q ss_pred HhhcCCCcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECCeech
Q 043330 116 FNTLGLPAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNNQAIR 167 (225)
Q Consensus 116 a~~~gld~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 167 (225)
+++.|+++..+.-=.....+.++.....+.+ +...||.|+|||+++.
T Consensus 39 L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~-----g~~tvP~ifi~g~~ig 85 (113)
T 3rhb_A 39 FKRLGVQPLVVELDQLGPQGPQLQKVLERLT-----GQHTVPNVFVCGKHIG 85 (113)
T ss_dssp HHHTTCCCEEEEGGGSTTHHHHHHHHHHHHH-----SCCSSCEEEETTEEEE
T ss_pred HHHcCCCCeEEEeecCCCChHHHHHHHHHHh-----CCCCcCEEEECCEEEc
Confidence 3455666542211111123555554444444 2478999999999874
No 46
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=60.32 E-value=3.8 Score=27.49 Aligned_cols=18 Identities=17% Similarity=0.370 Sum_probs=15.6
Q ss_pred ceEEEEEEEeCChhhHHH
Q 043330 12 NVNLSVYYETLSPTCSNF 29 (225)
Q Consensus 12 kV~V~vyyESlCPds~~F 29 (225)
.+.|.||+-+.||+|++.
T Consensus 3 ~m~v~ly~~~~Cp~C~~~ 20 (89)
T 3msz_A 3 AMKVKIYTRNGCPYCVWA 20 (89)
T ss_dssp CCCEEEEECTTCHHHHHH
T ss_pred ceEEEEEEcCCChhHHHH
Confidence 357999999999999875
No 47
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=59.24 E-value=6.7 Score=29.99 Aligned_cols=45 Identities=13% Similarity=0.326 Sum_probs=30.1
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
++....|+.|-.||-+-||.|+.++- .|..+++ ++.+.-++.+|-
T Consensus 43 l~~~~gk~vll~F~a~wC~~C~~~~p-~l~~l~~-~~~~~~~v~vv~ 87 (165)
T 3s9f_A 43 MDSLSGKTVFFYFSASWCPPCRGFTP-QLVEFYE-KHHDSKNFEIIL 87 (165)
T ss_dssp SGGGTTSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHTTTTTEEEEE
T ss_pred HHHcCCCEEEEEEECCcChhHHHHHH-HHHHHHH-HhccCCCeEEEE
Confidence 44445688888899999999999863 3555555 455422555553
No 48
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=58.62 E-value=21 Score=24.25 Aligned_cols=34 Identities=12% Similarity=0.232 Sum_probs=23.3
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
..+++-|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 51 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAP-ILDEIAD-EYQG 51 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred hcCCeEEEEEECCCCHhHHHHHH-HHHHHHH-HhCC
Confidence 45677888999999999999843 2444443 3444
No 49
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=58.60 E-value=19 Score=24.28 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=23.5
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISI 45 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~ 45 (225)
.+++.|-.||-+-||.|+.+. ..|..+.. .+.+.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~-~~~~~~~~-~~~~~ 51 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIA-PVLEELAA-DYEGK 51 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHH-HHHHHHHH-HTTTT
T ss_pred cCCcEEEEEECCCCHHHHHHh-HHHHHHHH-HhcCC
Confidence 567788889999999999984 33444444 45443
No 50
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=57.94 E-value=18 Score=24.82 Aligned_cols=34 Identities=12% Similarity=0.131 Sum_probs=23.5
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
...++.|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 56 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSP-LINLAAN-TYSD 56 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHH-HHHHHHH-HTTT
T ss_pred cCCceEEEEEECCCCHHHHHhHH-HHHHHHH-HhCC
Confidence 45677888999999999998853 3444443 3444
No 51
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=57.55 E-value=9 Score=28.03 Aligned_cols=43 Identities=14% Similarity=0.254 Sum_probs=28.5
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++....|+.|-.||-+-||.|+.++.. |..+.. ++.+. ++.++
T Consensus 23 l~~~~gk~vll~f~~~~C~~C~~~~~~-l~~l~~-~~~~~-~~~~v 65 (152)
T 3gl3_A 23 LSDKTGSVVYLDFWASWCGPCRQSFPW-MNQMQA-KYKAK-GFQVV 65 (152)
T ss_dssp GGGGTTSEEEEEEECTTCTHHHHHHHH-HHHHHH-HHGGG-TEEEE
T ss_pred HHHhCCCEEEEEEECCcCHHHHHHHHH-HHHHHH-HhhcC-CeEEE
Confidence 344456788888999999999988643 665555 34442 24444
No 52
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=57.42 E-value=14 Score=26.49 Aligned_cols=33 Identities=6% Similarity=0.025 Sum_probs=24.8
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcc
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDL 42 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l 42 (225)
....++.|-.||-+-||.|+..+. .|..+.+ ++
T Consensus 30 ~~~gk~vll~F~~~~C~~C~~~~~-~l~~l~~-~~ 62 (148)
T 3fkf_A 30 RFRNRYLLLNFWASWCDPQPEANA-ELKRLNK-EY 62 (148)
T ss_dssp TTTTSEEEEEEECGGGCCCHHHHH-HHHHHHH-HT
T ss_pred ccCCcEEEEEEECCCCHHHHHHhH-HHHHHHH-Hh
Confidence 446788888999999999998863 3555555 45
No 53
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=57.35 E-value=16 Score=26.85 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=29.9
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
+++....|+-|-.||-+-||.|+..+. .|..++. ++.+ -++.++
T Consensus 18 ~l~~~~gk~vlv~F~a~wC~~C~~~~~-~l~~l~~-~~~~-~~v~vv 61 (151)
T 3raz_A 18 SLQSLKAPVRIVNLWATWCGPCRKEMP-AMSKWYK-AQKK-GSVDMV 61 (151)
T ss_dssp CGGGCCSSEEEEEEECTTCHHHHHHHH-HHHHHHH-TSCT-TTEEEE
T ss_pred cHHHhCCCEEEEEEEcCcCHHHHHHHH-HHHHHHH-Hhcc-CCeEEE
Confidence 344556788889999999999999864 3666665 4532 244444
No 54
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=57.13 E-value=9.8 Score=28.06 Aligned_cols=42 Identities=17% Similarity=0.312 Sum_probs=28.3
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
....|+.|-.||-+-||.|+..+...|..+++ ++.+. ++.+|
T Consensus 27 ~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~-~~~~~-~v~~v 68 (160)
T 3lor_A 27 DLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHR-MIDES-QVQVI 68 (160)
T ss_dssp HHTTSEEEEEEECTTCHHHHHTHHHHHHHHHH-HSCTT-TEEEE
T ss_pred HhCCCEEEEEEEcCCCcchhhhhhHHHHHHHH-HhCcC-CcEEE
Confidence 34568888889999999999853344666666 45543 34444
No 55
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=56.42 E-value=9.7 Score=26.70 Aligned_cols=37 Identities=8% Similarity=0.184 Sum_probs=25.9
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
+.....|+.|-.||-+-||.|+..+. .|..+.. +..+
T Consensus 17 l~~~~gk~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 53 (138)
T 4evm_A 17 LSDYKGKKVYLKFWASWCSICLASLP-DTDEIAK-EAGD 53 (138)
T ss_dssp GGGGTTSEEEEEECCTTCHHHHHHHH-HHHHHHH-TCTT
T ss_pred HHHhCCCEEEEEEEcCcCHHHHHHHH-HHHHHHH-HhCC
Confidence 33445677888888999999988854 3666665 4444
No 56
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=55.86 E-value=21 Score=24.13 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=22.3
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
.+++.|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 48 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAP-VLEEFAE-AHAD 48 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HSTT
T ss_pred CCCcEEEEEECCCCHHHHHHHH-HHHHHHH-HhcC
Confidence 4567788899999999998853 2444433 3444
No 57
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=55.61 E-value=22 Score=24.00 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=21.5
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
...+.-|-.||-+-||.|+.+.. .|..+..
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~-~~~~~~~ 47 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGP-ALGEIGK 47 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred hCCCEEEEEEECCCChhHHHHhH-HHHHHHH
Confidence 45677888899999999998843 2444333
No 58
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=55.52 E-value=23 Score=23.85 Aligned_cols=33 Identities=12% Similarity=0.200 Sum_probs=22.5
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
.+++-|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 49 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAP-ILEEIAK-EYEG 49 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHH-HHHHHHH-HTBT
T ss_pred CCCeEEEEEECCCCHHHHHhhH-HHHHHHH-HhhC
Confidence 3567788889999999999853 3444444 3443
No 59
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=55.27 E-value=8.9 Score=27.97 Aligned_cols=45 Identities=16% Similarity=0.220 Sum_probs=29.8
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHH---HHhhccccceEEEEEE
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEG---VFNNDLISIINLRLVP 52 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p---~~~~~l~~~vdl~lvP 52 (225)
+++.-..++.|-.||-+-||.|+..+-. |.. +++ ++.+ -++++|-
T Consensus 25 ~l~~~~gk~vll~F~a~wC~~C~~~~~~-l~~~~~l~~-~~~~-~~~~vi~ 72 (142)
T 3eur_A 25 TLYQFPAEYTLLFINNPGCHACAEMIEG-LKASPVING-FTAA-KKLKVLS 72 (142)
T ss_dssp ETTTCCCSEEEEEECCSSSHHHHHHHHH-HHHCHHHHH-HHHT-TSEEEEE
T ss_pred eHHHcCCCEEEEEEECCCCccHHHHHHH-HhhhHHHHH-Hhcc-CCeEEEE
Confidence 3555556888888999999999998643 555 444 3433 2556654
No 60
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=54.92 E-value=6.2 Score=28.18 Aligned_cols=23 Identities=13% Similarity=0.289 Sum_probs=19.4
Q ss_pred CCCCCceEEEEEEEeCChhhHHH
Q 043330 7 PAKPGNVNLSVYYETLSPTCSNF 29 (225)
Q Consensus 7 ~~~~~kV~V~vyyESlCPds~~F 29 (225)
..+..+.+|.||.-+-||+|++.
T Consensus 10 ~~~~~~~~v~vy~~~~Cp~C~~a 32 (99)
T 3qmx_A 10 HGSAVSAKIEIYTWSTCPFCMRA 32 (99)
T ss_dssp CCSCCCCCEEEEECTTCHHHHHH
T ss_pred cCccCCCCEEEEEcCCChhHHHH
Confidence 34566778999999999999887
No 61
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=54.90 E-value=22 Score=23.66 Aligned_cols=33 Identities=9% Similarity=0.214 Sum_probs=22.4
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
..++.|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 47 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAP-IIEELAE-DYPQ 47 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHH-HHHHHHH-HCTT
T ss_pred cCCcEEEEEECCCChhHHHHhH-HHHHHHH-HcCC
Confidence 3567788888999999999853 3444443 3444
No 62
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=54.86 E-value=23 Score=23.78 Aligned_cols=33 Identities=3% Similarity=0.109 Sum_probs=22.7
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
.++..|-.||-+-||.|+.+.. .|..+.. ++.+
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 49 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAP-VIDELAK-EYSG 49 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred CCCcEEEEEECCCChHHHHHHH-HHHHHHH-HhcC
Confidence 4677888899999999999853 2444443 3444
No 63
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=54.76 E-value=4.9 Score=26.36 Aligned_cols=19 Identities=32% Similarity=0.541 Sum_probs=16.5
Q ss_pred ceEEEEEEEeCChhhHHHH
Q 043330 12 NVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 12 kV~V~vyyESlCPds~~Fi 30 (225)
.|.|.+||-+-||.|+.+.
T Consensus 2 m~~vv~f~~~~C~~C~~~~ 20 (85)
T 1nho_A 2 VVNIEVFTSPTCPYCPMAI 20 (85)
T ss_dssp CCCEEEESCSSSCCSTTHH
T ss_pred eEEEEEEECCCCcchHHHH
Confidence 4678999999999999884
No 64
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=54.26 E-value=11 Score=27.94 Aligned_cols=40 Identities=20% Similarity=0.359 Sum_probs=26.8
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
...|+.|-.||-+-||.|+.++. .|..+.. ++.+. ++.++
T Consensus 32 ~~gk~vlv~f~~~~C~~C~~~~~-~l~~l~~-~~~~~-~v~~v 71 (165)
T 3or5_A 32 LKGKAYIVNFFATWCPPCRSEIP-DMVQVQK-TWASR-GFTFV 71 (165)
T ss_dssp GTTCEEEEEEECTTSHHHHHHHH-HHHHHHH-HHTTT-TEEEE
T ss_pred cCCCEEEEEEEcCcCHHHHHHHH-HHHHHHH-HhccC-CeEEE
Confidence 35677888899999999999853 3555555 34442 34444
No 65
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=53.40 E-value=11 Score=26.52 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=23.4
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLI 43 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~ 43 (225)
...++.|-.||-+-||.|+.++. .|..+.. ++.
T Consensus 23 ~~~k~~ll~f~~~~C~~C~~~~~-~l~~~~~-~~~ 55 (136)
T 1zzo_A 23 LLGKPAVLWFWAPWCPTCQGEAP-VVGQVAA-SHP 55 (136)
T ss_dssp GTTSCEEEEEECTTCHHHHHHHH-HHHHHHH-HCT
T ss_pred hCCCeEEEEEEcCCChhHHHHHH-HHHHHHH-HcC
Confidence 35677888889999999999853 3555555 344
No 66
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=53.00 E-value=13 Score=27.41 Aligned_cols=43 Identities=14% Similarity=0.133 Sum_probs=27.5
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++.-..|+.|-.||-+-||.|+..+. .|..++. ++.+. +++++
T Consensus 24 l~~~~gk~vll~F~a~~C~~C~~~~~-~l~~l~~-~~~~~-~~~vv 66 (152)
T 2lrn_A 24 LNDFKGKYVLVDFWFAGCSWCRKETP-YLLKTYN-AFKDK-GFTIY 66 (152)
T ss_dssp SGGGTTSEEEEEEECTTCTTHHHHHH-HHHHHHH-HHTTT-TEEEE
T ss_pred HHHcCCCEEEEEEECCCChhHHHHHH-HHHHHHH-HhccC-CeEEE
Confidence 33445678888889999999998753 3555554 34432 34444
No 67
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=52.82 E-value=7.4 Score=26.55 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=12.7
Q ss_pred EEEEEEe----CChhhHHH
Q 043330 15 LSVYYET----LSPTCSNF 29 (225)
Q Consensus 15 V~vyyES----lCPds~~F 29 (225)
|.||.-+ .||+|++.
T Consensus 2 v~iY~~~~~~~~Cp~C~~a 20 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNA 20 (87)
T ss_dssp EEEEECCTTTSCCHHHHHH
T ss_pred EEEEEeCCCCCcCccHHHH
Confidence 7788888 99999776
No 68
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=52.77 E-value=6.5 Score=27.99 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=24.1
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccc
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLI 43 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~ 43 (225)
....++.|-.||-+-||.|+.++ ..|..+.. ++.
T Consensus 21 ~~~~k~~lv~f~~~~C~~C~~~~-~~l~~~~~-~~~ 54 (136)
T 1lu4_A 21 SLQGKPAVLWFWTPWCPFCNAEA-PSLSQVAA-ANP 54 (136)
T ss_dssp GGTTSCEEEEEECTTCHHHHHHH-HHHHHHHH-HCT
T ss_pred HhCCCEEEEEEECCcChhHHHHH-HHHHHHHH-HCC
Confidence 33567788888899999999975 34555555 344
No 69
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=52.51 E-value=32 Score=24.93 Aligned_cols=33 Identities=9% Similarity=0.169 Sum_probs=23.1
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
..++.|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~-~l~~l~~-~~~~ 69 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAP-ILDELAK-EYDG 69 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHH-HHHHHHH-HTTT
T ss_pred CCCEEEEEEECCcCHHHHHHHH-HHHHHHH-HhcC
Confidence 5678888999999999999853 3444443 3444
No 70
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=52.39 E-value=7.3 Score=30.38 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=29.7
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
+++.-..|+.|-.|+-+-||+|+..+- .|..+++ ++.+. ++++|
T Consensus 40 ~l~~~~Gk~vlv~F~atwC~~C~~~~p-~l~~l~~-~~~~~-~~~vi 83 (187)
T 3dwv_A 40 NLVQHKGSPLLIYNVASKCGYTKGGYE-TATTLYN-KYKSQ-GFTVL 83 (187)
T ss_dssp CGGGGTTSCEEEEEECCBCSCCTTHHH-HHHHHHH-HHGGG-TCEEE
T ss_pred eHHHhCCCEEEEEEecCCCCCcHHHHH-HHHHHHH-HhhhC-CeEEE
Confidence 444556788899999999999998753 3566655 45443 34444
No 71
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=51.96 E-value=13 Score=27.20 Aligned_cols=33 Identities=12% Similarity=0.252 Sum_probs=23.5
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
++.-..++.|-.||-+-||.|+..+. .|..++.
T Consensus 21 l~~~~gk~vlv~F~~~~C~~C~~~~~-~l~~~~~ 53 (151)
T 2f9s_A 21 LSDLKGKGVFLNFWGTWCEPCKKEFP-YMANQYK 53 (151)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred HHHcCCCEEEEEEECCCCHHHHHHHH-HHHHHHH
Confidence 33345678888899999999998753 3555554
No 72
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.93 E-value=10 Score=27.53 Aligned_cols=17 Identities=12% Similarity=0.126 Sum_probs=14.9
Q ss_pred ceEEEEEEEeCChhhHH
Q 043330 12 NVNLSVYYETLSPTCSN 28 (225)
Q Consensus 12 kV~V~vyyESlCPds~~ 28 (225)
..+|.||.-+.||+|..
T Consensus 7 ~m~V~vy~~~~C~~C~~ 23 (111)
T 2ct6_A 7 GMVIRVFIASSSGFVAI 23 (111)
T ss_dssp CCCEEEEECSSCSCHHH
T ss_pred ccEEEEEEcCCCCCccc
Confidence 35799999999999985
No 73
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=51.71 E-value=7.6 Score=29.14 Aligned_cols=16 Identities=25% Similarity=0.366 Sum_probs=14.5
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.||+-+-||+|++.
T Consensus 38 ~Vvvy~~~~Cp~C~~a 53 (129)
T 3ctg_A 38 EVFVAAKTYCPYCKAT 53 (129)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEECCCCCchHHH
Confidence 5899999999999977
No 74
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=51.61 E-value=13 Score=27.10 Aligned_cols=22 Identities=27% Similarity=0.484 Sum_probs=18.0
Q ss_pred EEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 14 NLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 14 ~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
.|.||+-+-||+|++. |.++++
T Consensus 26 ~Vvvf~~~~Cp~C~~a----lk~~L~ 47 (118)
T 3c1r_A 26 EIFVASKTYCPYCHAA----LNTLFE 47 (118)
T ss_dssp SEEEEECSSCHHHHHH----HHHHHT
T ss_pred cEEEEEcCCCcCHHHH----HHHHHH
Confidence 5889999999999987 466665
No 75
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=51.60 E-value=31 Score=23.11 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=21.3
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
.+++.|-.||.+-||.|+.+.. .|..+..
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~~ 47 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISP-KLVELST 47 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHhhH-HHHHHHH
Confidence 5677888999999999999853 3444443
No 76
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=51.27 E-value=28 Score=23.88 Aligned_cols=33 Identities=12% Similarity=0.228 Sum_probs=22.6
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
.+++-|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 54 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAP-SLEAIAA-EYGD 54 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred CCCeEEEEEECCCCHhHHhcCH-HHHHHHH-HhcC
Confidence 4677788899999999998843 2444443 3443
No 77
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=51.17 E-value=28 Score=23.53 Aligned_cols=33 Identities=6% Similarity=0.129 Sum_probs=22.4
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
.+++.|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 50 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAP-VVDEIAG-EYKD 50 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT
T ss_pred CCCcEEEEEECCCCHhHHHHHH-HHHHHHH-HhCC
Confidence 4677788899999999999843 2444433 3444
No 78
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=50.88 E-value=11 Score=27.99 Aligned_cols=42 Identities=12% Similarity=0.155 Sum_probs=27.3
Q ss_pred CCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 7 PAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 7 ~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
+.-..|+.|-.|+-+-||.|+..+. .|..++. ++.+. ++++|
T Consensus 28 ~~~~gk~vll~f~a~~C~~C~~~~~-~l~~l~~-~~~~~-~~~vv 69 (170)
T 2p5q_A 28 SIFKGKVLLIVNVASKCGMTNSNYA-EMNQLYE-KYKDQ-GLEIL 69 (170)
T ss_dssp GGGTTSEEEEEEECSSSTTHHHHHH-HHHHHHH-HHGGG-TEEEE
T ss_pred HHhCCCEEEEEEEeccCCccHHHHH-HHHHHHH-HhccC-CEEEE
Confidence 3345677788888899999998753 3555555 34443 35554
No 79
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=50.38 E-value=13 Score=28.46 Aligned_cols=43 Identities=14% Similarity=0.076 Sum_probs=29.2
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
++.-..|+.|-.|+-+-||.|+..+ ..|..++. ++.+. +++|-
T Consensus 28 l~~~~gk~vlv~F~a~~C~~C~~~~-~~l~~l~~-~~~~~--~~~v~ 70 (188)
T 2cvb_A 28 LSQFHEPLLAVVFMCNHCPYVKGSI-GELVALAE-RYRGK--VAFVG 70 (188)
T ss_dssp GGGCCSSEEEEEEECSSCHHHHTTH-HHHHHHHH-HTTTT--EEEEE
T ss_pred HHHhCCCEEEEEEECCCCccHHHHH-HHHHHHHH-HhhcC--eEEEE
Confidence 3334568888889999999999775 33666665 46554 55553
No 80
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=49.94 E-value=17 Score=27.01 Aligned_cols=45 Identities=13% Similarity=0.347 Sum_probs=29.5
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPW 53 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~ 53 (225)
++....|+.|-.||-+-||.|+..+ ..|..++. ++.+ -++.++..
T Consensus 36 l~~~~gk~vll~F~~~~C~~C~~~~-~~l~~~~~-~~~~-~~~~~v~v 80 (158)
T 3hdc_A 36 LAQYRGKIVLVNFWASWCPYCRDEM-PSMDRLVK-SFPK-GDLVVLAV 80 (158)
T ss_dssp SGGGTTSEEEEEEECTTCHHHHHHH-HHHHHHHH-HSST-TSEEEEEE
T ss_pred hHHhCCCEEEEEEECCcCHHHHHHH-HHHHHHHH-Hccc-CCeEEEEE
Confidence 3344567888888999999999875 33666665 4543 24555543
No 81
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=49.82 E-value=31 Score=23.44 Aligned_cols=21 Identities=14% Similarity=0.343 Sum_probs=17.6
Q ss_pred CCceEEEEEEEeCChhhHHHH
Q 043330 10 PGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi 30 (225)
.++.-|-.||-+-||.|+.+.
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~ 41 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVT 41 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHH
T ss_pred cCCEEEEEEeCCCChhHHHHH
Confidence 457778889999999999884
No 82
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=49.57 E-value=7.8 Score=28.29 Aligned_cols=43 Identities=12% Similarity=0.211 Sum_probs=27.3
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
....|+.|-.||-+-||.|+.++- .|..+++ ++.+.-+++++-
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~~-~l~~l~~-~~~~~~~~~vv~ 67 (144)
T 1i5g_A 25 SLAGKTVFFYFSASWCPPSRAFTP-QLIDFYK-AHAEKKNFEVML 67 (144)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHTTTTTEEEEE
T ss_pred HcCCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HhccCCCEEEEE
Confidence 335677888888899999998853 3555555 344212455543
No 83
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=49.37 E-value=39 Score=24.04 Aligned_cols=31 Identities=6% Similarity=0.214 Sum_probs=22.5
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
....++-|-.||-+-||.|+.+. ..|..+..
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~-p~l~~~~~ 69 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQS-TEMDKLQK 69 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred HccCCEEEEEEECCCCHHHHHHh-HHHHHHHH
Confidence 35678888899999999999884 23444443
No 84
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=49.04 E-value=6.1 Score=28.20 Aligned_cols=16 Identities=19% Similarity=0.484 Sum_probs=11.5
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
.|+||.-+.||+|.+.
T Consensus 5 ~I~vYs~~~Cp~C~~a 20 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRL 20 (92)
T ss_dssp CEEEEECTTCSSHHHH
T ss_pred cEEEEcCCCCHhHHHH
Confidence 4777777777777665
No 85
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=48.84 E-value=29 Score=24.43 Aligned_cols=33 Identities=9% Similarity=0.061 Sum_probs=22.7
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
..++.|-.||-.-||.|+.+. ..|..+.. ++.+
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~-~~l~~~~~-~~~~ 62 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILG-PRLEKMVA-KQHG 62 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCCcEEEEEECCCCHHHHHHH-HHHHHHHH-HhcC
Confidence 456778888999999999985 33444444 3443
No 86
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=48.08 E-value=8.7 Score=27.15 Aligned_cols=19 Identities=11% Similarity=0.102 Sum_probs=16.0
Q ss_pred CceEEEEEEEeCChhhHHH
Q 043330 11 GNVNLSVYYETLSPTCSNF 29 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~F 29 (225)
.+-+|.||+-+.||+|++.
T Consensus 20 ~~~~v~ly~~~~Cp~C~~a 38 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKT 38 (103)
T ss_dssp CCSCEEEEECSSCHHHHHH
T ss_pred CCCeEEEEcCCCCchHHHH
Confidence 3456899999999999887
No 87
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=47.91 E-value=13 Score=27.11 Aligned_cols=43 Identities=14% Similarity=0.189 Sum_probs=27.7
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++....++.|-.|+-+-||.|+..+. .|..++. ++.+ -++.++
T Consensus 25 l~~~~gk~~lv~f~~~~C~~C~~~~~-~l~~l~~-~~~~-~~~~~v 67 (152)
T 2lja_A 25 LADLKGKYIYIDVWATWCGPCRGELP-ALKELEE-KYAG-KDIHFV 67 (152)
T ss_dssp STTTTTSEEEEEECCSSCCGGGGTHH-HHHHHHH-HSTT-SSEEEE
T ss_pred HHHcCCCEEEEEEECCcCHhHHHHhH-HHHHHHH-Hhcc-CCeEEE
Confidence 44445678888889999999988753 3555554 3443 234444
No 88
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=47.45 E-value=33 Score=23.05 Aligned_cols=32 Identities=9% Similarity=0.131 Sum_probs=22.4
Q ss_pred CceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 11 GNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
+++-|-.||-+-||.|+.+. ..|..+.. .+.+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~-~~~~~~~~-~~~~ 52 (109)
T 3tco_A 21 NKLVLVDCWAEWCAPCHLYE-PIYKKVAE-KYKG 52 (109)
T ss_dssp SSEEEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCeEEEEEECCCCHHHHhhh-HHHHHHHH-HhCC
Confidence 56778889999999999985 33444444 4444
No 89
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=47.33 E-value=32 Score=24.86 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=23.3
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
..+++.|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p-~l~~l~~-~~~~ 71 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAP-ILDEIAD-EYQG 71 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHH-HHHHHHH-HTTT
T ss_pred hcCCEEEEEEECCCCHHHHHHhH-HHHHHHH-HhcC
Confidence 45678888999999999998842 2444433 3444
No 90
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=47.29 E-value=19 Score=26.23 Aligned_cols=42 Identities=17% Similarity=0.353 Sum_probs=28.1
Q ss_pred CCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 7 PAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 7 ~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
.....++.|-.||-+-||.|+..+. .|..++. ++.+ .+++++
T Consensus 24 ~~~~gk~vll~f~~~~C~~C~~~~~-~l~~~~~-~~~~-~~~~~v 65 (154)
T 3kcm_A 24 SDLKGQVVIVNFWATWCPPCREEIP-SMMRLNA-AMAG-KPFRML 65 (154)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHHHH-HHHHHHH-HTTT-SSEEEE
T ss_pred hhcCCCEEEEEEECCCCHHHHHHHH-HHHHHHH-Hhcc-CCeEEE
Confidence 3335678888888999999999854 3666655 4544 234444
No 91
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=47.20 E-value=31 Score=24.08 Aligned_cols=33 Identities=3% Similarity=0.081 Sum_probs=22.8
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
..++.|-.||-+-||.|+.+.. .|..+.. ++.+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~~-~~~~ 65 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAP-VFADLAK-KFPN 65 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHH-HHHHHHH-HCTT
T ss_pred cCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HCCC
Confidence 4567788899999999999853 3444444 3444
No 92
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=46.33 E-value=36 Score=22.79 Aligned_cols=33 Identities=6% Similarity=0.064 Sum_probs=23.1
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
.+++.|-.||-+-||.|+.+.. .|..+.. .+.+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~-~~~~~~~-~~~~ 51 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKP-FFHSLSE-KYSN 51 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHH-HSTT
T ss_pred CCCeEEEEEECCCChhhHHHHH-HHHHHHH-HccC
Confidence 5778888999999999998842 3444433 3444
No 93
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=46.18 E-value=8.1 Score=25.58 Aligned_cols=16 Identities=13% Similarity=0.301 Sum_probs=13.8
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.+|+-+-||+|++.
T Consensus 2 ~v~~f~~~~C~~C~~~ 17 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRA 17 (85)
T ss_dssp EEEEECCTTSTHHHHH
T ss_pred EEEEEeCCCCCCHHHH
Confidence 6888999999999876
No 94
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=46.12 E-value=33 Score=25.82 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=28.6
Q ss_pred CCCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 5 SLPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 5 ~~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
+++.-..|+.|-.|+-+-||.|+ .+ .+|..+++ ++.+. ++++|
T Consensus 26 ~l~~~~Gk~vll~F~a~wC~~C~-~~-~~l~~l~~-~~~~~-~v~vv 68 (171)
T 3cmi_A 26 PFDQLKGKVVLIVNVASKCGFTP-QY-KELEALYK-RYKDE-GFTII 68 (171)
T ss_dssp CGGGGTTCEEEEEEEESSSCCHH-HH-HHHHHHHH-HHGGG-TEEEE
T ss_pred cHHHcCCCEEEEEEEecCCCcch-hH-HHHHHHHH-HhccC-CeEEE
Confidence 34445667888888999999999 54 45666666 45442 34444
No 95
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=46.04 E-value=17 Score=26.55 Aligned_cols=32 Identities=13% Similarity=0.231 Sum_probs=23.3
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
+.... ++.|-.||-+-||.|+..+. .|..+++
T Consensus 26 l~~~~-k~vll~f~~~~C~~C~~~~~-~l~~l~~ 57 (154)
T 3ia1_A 26 PATVS-KPAVIVFWASWCTVCKAEFP-GLHRVAE 57 (154)
T ss_dssp TTTSC-SSEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred hHHcC-CeEEEEEEcccChhHHHHHH-HHHHHHH
Confidence 44444 78888899999999998753 3555555
No 96
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=45.87 E-value=37 Score=23.50 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=20.9
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..+.-|-.||-.-||.|+.+.. .|..+..
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~-~~~~~~~ 57 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAP-VLEEIAT 57 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCcEEEEEECCCCHHHHHHHH-HHHHHHH
Confidence 4667788899999999999853 2444433
No 97
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=45.59 E-value=34 Score=23.29 Aligned_cols=29 Identities=7% Similarity=0.179 Sum_probs=21.0
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..++.|-.||-+-||.|+.+.. .|..+..
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~-~l~~~~~ 53 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAP-IFAELAK 53 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHH-HHHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHHH-HHHHHHH
Confidence 4677888889999999998853 3444443
No 98
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=45.12 E-value=34 Score=23.29 Aligned_cols=31 Identities=16% Similarity=0.134 Sum_probs=21.6
Q ss_pred CceEEEEEEEeCChhhHHHHHHhhHHHHhhccc
Q 043330 11 GNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLI 43 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~ 43 (225)
.++.|-.||-+-||.|+.+.. .|..+.. .+.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~-~l~~~~~-~~~ 54 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAP-LFETLSN-DYA 54 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHH-HHHHHHH-HTT
T ss_pred CCeEEEEEECCCCHHHHHHHH-HHHHHHH-HcC
Confidence 567788899999999999853 2444443 344
No 99
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=44.68 E-value=39 Score=24.39 Aligned_cols=40 Identities=20% Similarity=0.360 Sum_probs=26.4
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
..++.|-.||-+-||+|+..+. .|..+.. ++.+. ++.++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~-~l~~l~~-~~~~~-~~~vv~ 66 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMP-KIIKTAN-DYKNK-NFQVLA 66 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHH-HHHHHHH-HGGGT-TEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHH-HHHHHHH-HhccC-CeEEEE
Confidence 4577888888999999998753 3555555 34432 344543
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=44.65 E-value=15 Score=26.80 Aligned_cols=42 Identities=14% Similarity=0.304 Sum_probs=26.7
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
....++.|-.||-+-||.|+.++- .|..++. ++.+.-+++++
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~p-~l~~l~~-~~~~~~~~~vv 66 (146)
T 1o8x_A 25 SLAGKLVFFYFSASWCPPARGFTP-QLIEFYD-KFHESKNFEVV 66 (146)
T ss_dssp GGTTCEEEEEEECTTCHHHHHHHH-HHHHHHH-HHTTTTTEEEE
T ss_pred HhCCCEEEEEEEccCCHHHHHHHH-HHHHHHH-HhhhcCCeEEE
Confidence 335677788888899999998853 3555555 34421144444
No 101
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=44.29 E-value=29 Score=25.20 Aligned_cols=29 Identities=14% Similarity=0.233 Sum_probs=20.6
Q ss_pred chhHHHHHHHHhhccCCCCCceeeEEEECCeech
Q 043330 134 NGTKLLLQHAYETSHLIPPHTILPWVLVNNQAIR 167 (225)
Q Consensus 134 ~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 167 (225)
.|.++..+..+++. ...||.|+|||+.+.
T Consensus 66 ~~~~~~~~l~~~~g-----~~tvP~vfi~g~~ig 94 (118)
T 3c1r_A 66 EGADIQAALYEING-----QRTVPNIYINGKHIG 94 (118)
T ss_dssp THHHHHHHHHHHHS-----CCSSCEEEETTEEEE
T ss_pred ChHHHHHHHHHHhC-----CCCcCEEEECCEEEE
Confidence 45566666655553 467999999999874
No 102
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=44.22 E-value=21 Score=26.40 Aligned_cols=44 Identities=20% Similarity=0.235 Sum_probs=28.0
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
++.-..|+.|-.|+-+-||.|+..+. .|..++. ++.+. ++++|-
T Consensus 26 l~~~~gk~vlv~f~a~~C~~C~~~~~-~l~~l~~-~~~~~-~~~vv~ 69 (169)
T 2v1m_A 26 LEKYRGHVCLIVNVACKCGATDKNYR-QLQEMHT-RLVGK-GLRILA 69 (169)
T ss_dssp GGGGTTSEEEEEEECSSSTTHHHHHH-HHHHHHH-HHGGG-TEEEEE
T ss_pred HHHcCCCEEEEEEeeccCCchHHHHH-HHHHHHH-HhhcC-CeEEEE
Confidence 33345677788888899999988753 3555555 34442 355543
No 103
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=43.87 E-value=16 Score=26.98 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=23.6
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
+.....++.|-.||-+-||.|+.++. .|..++.
T Consensus 33 ~~~~~gk~vlv~F~a~~C~~C~~~~~-~l~~l~~ 65 (164)
T 2h30_A 33 VYLKKDKPTLIKFWASWCPLCLSELG-QAEKWAQ 65 (164)
T ss_dssp GGCCTTSCEEEEECCTTCHHHHHHHH-HHHHHHT
T ss_pred HHHhCCCEEEEEEECCCCHHHHHHHH-HHHHHHH
Confidence 33445678888888999999998853 3555554
No 104
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=43.66 E-value=36 Score=24.75 Aligned_cols=41 Identities=7% Similarity=0.121 Sum_probs=27.6
Q ss_pred CCCCceEEEEEEEeCChh--hHHHHHHhhHHHHhhcc-ccceEEEEE
Q 043330 8 AKPGNVNLSVYYETLSPT--CSNFIVKNLEGVFNNDL-ISIINLRLV 51 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPd--s~~Fi~~qL~p~~~~~l-~~~vdl~lv 51 (225)
.-..|+.|-.||-+-||. |+..+ ..|..+++ ++ .+ -++++|
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~-~~l~~l~~-~~~~~-~~~~~v 73 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSN-SELREIYK-KYKKN-KYIGML 73 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHH-HHHHHHHH-HHTTC-SSEEEE
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHH-HHHHHHHH-HhccC-CCeEEE
Confidence 446688888889999999 99886 33555555 44 32 235554
No 105
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=43.41 E-value=25 Score=26.35 Aligned_cols=43 Identities=12% Similarity=0.075 Sum_probs=27.2
Q ss_pred HhhcCC-CcccccccccCCchhHHHHHHHHhhccCCCCCceeeEEEECCeech
Q 043330 116 FNTLGL-PAKPVLDCYKSGNGTKLLLQHAYETSHLIPPHTILPWVLVNNQAIR 167 (225)
Q Consensus 116 a~~~gl-d~~~I~~C~~s~~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 167 (225)
+...|+ ++..+. -..+.++.....+.|.. +.||-|+|||+++.
T Consensus 45 L~~~gv~~~~~~~----v~~~~~~r~~l~~~sg~-----~TvPqIFI~g~~IG 88 (118)
T 2wul_A 45 LRLHGVRDYAAYN----VLDDPELRQGIKDYSNW-----PTIPQVYLNGEFVG 88 (118)
T ss_dssp HHHTTCCSCEEEE----TTSCHHHHHHHHHHHTC-----CSSCEEEETTEEEE
T ss_pred HHHhCCcCeEeec----ccCCHHHHHHHHHhccC-----CCCCeEeECCEEEC
Confidence 445565 344332 13345666666666643 57999999999985
No 106
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=43.34 E-value=11 Score=24.67 Aligned_cols=16 Identities=25% Similarity=0.619 Sum_probs=13.1
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.+|+-+.||+|++.
T Consensus 2 ~i~~y~~~~C~~C~~~ 17 (82)
T 1fov_A 2 NVEIYTKETCPYCHRA 17 (82)
T ss_dssp CEEEEECSSCHHHHHH
T ss_pred cEEEEECCCChhHHHH
Confidence 4678888999999875
No 107
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=43.32 E-value=30 Score=25.95 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=12.9
Q ss_pred CceeeEEEECCeech
Q 043330 153 HTILPWVLVNNQAIR 167 (225)
Q Consensus 153 ~~~VPwI~iNG~~~~ 167 (225)
...||.|+|||+++.
T Consensus 68 ~~tVP~IfI~G~~IG 82 (127)
T 3l4n_A 68 RGTVPNLLVNGVSRG 82 (127)
T ss_dssp CCSSCEEEETTEECC
T ss_pred CCCcceEEECCEEEc
Confidence 368999999999875
No 108
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=43.14 E-value=11 Score=24.85 Aligned_cols=16 Identities=13% Similarity=0.368 Sum_probs=14.0
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.+|+-+-||+|++.
T Consensus 2 ~v~~f~~~~C~~C~~~ 17 (81)
T 1h75_A 2 RITIYTRNDCVQCHAT 17 (81)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred EEEEEcCCCChhHHHH
Confidence 5789999999999875
No 109
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=42.91 E-value=24 Score=24.97 Aligned_cols=35 Identities=11% Similarity=0.265 Sum_probs=23.3
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISI 45 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~ 45 (225)
...++-|-.||-.-||.|+.+.. .|..+.. .+.+.
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~-~~~~~~~-~~~~~ 67 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTP-EWKKAAT-ALKDV 67 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHH-HHHHHHH-HTTTT
T ss_pred cCCCeEEEEEECCCCHHHHhhCH-HHHHHHH-HhcCc
Confidence 34677888999999999998843 2444433 34443
No 110
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=42.07 E-value=23 Score=27.15 Aligned_cols=43 Identities=19% Similarity=0.173 Sum_probs=28.8
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++.-..|+-|-.|+-+-||.|+..+. +|..++. ++.+. ++++|
T Consensus 44 l~~~~Gk~vlv~F~atwC~~C~~~~p-~l~~l~~-~~~~~-~v~vv 86 (181)
T 2p31_A 44 LEKYRGSVSLVVNVASECGFTDQHYR-ALQQLQR-DLGPH-HFNVL 86 (181)
T ss_dssp GGGGTTSEEEEEEECSSSTTHHHHHH-HHHHHHH-HHGGG-TEEEE
T ss_pred HHHcCCCEEEEEEeccCCCCcHHHHH-HHHHHHH-HhhcC-CEEEE
Confidence 33345678888999999999998753 4666665 45442 35554
No 111
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=41.90 E-value=19 Score=27.84 Aligned_cols=44 Identities=14% Similarity=0.102 Sum_probs=28.7
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
++.-..|+.|-.|+-+-||.|+..+ .+|..+++ ++.+. ++++|-
T Consensus 44 l~~~~Gk~vlv~F~atwC~~C~~~~-~~l~~l~~-~~~~~-~v~vv~ 87 (185)
T 2gs3_A 44 LDKYRGFVCIVTNVASQGGKTEVNY-TQLVDLHA-RYAEC-GLRILA 87 (185)
T ss_dssp GGGGTTSEEEEEEECSSSTTHHHHH-HHHHHHHH-HHGGG-TEEEEE
T ss_pred HHHcCCCEEEEEEecCCCCchHHHH-HHHHHHHH-HhhcC-CeEEEE
Confidence 3334567888899999999998875 33666555 34442 355553
No 112
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=41.73 E-value=12 Score=24.03 Aligned_cols=16 Identities=13% Similarity=0.455 Sum_probs=13.7
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
.|.+|+-+-||+|++.
T Consensus 2 ~i~~y~~~~C~~C~~~ 17 (75)
T 1r7h_A 2 SITLYTKPACVQCTAT 17 (75)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred eEEEEeCCCChHHHHH
Confidence 5789999999999875
No 113
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=41.11 E-value=26 Score=23.73 Aligned_cols=20 Identities=10% Similarity=0.426 Sum_probs=16.9
Q ss_pred CceEEEEEEEeCChhhHHHH
Q 043330 11 GNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi 30 (225)
.++.|-.||-+-||.|+.+.
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~ 40 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLA 40 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHH
T ss_pred CCcEEEEEECCCChhHHHhh
Confidence 45678889999999999874
No 114
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=41.10 E-value=31 Score=25.03 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=19.3
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHH
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi 30 (225)
+.....++.|-.||-+-||.|+.++
T Consensus 37 l~~~~gk~~ll~f~~~~C~~C~~~~ 61 (156)
T 1kng_A 37 PAAFKGKVSLVNVWASWCVPCHDEA 61 (156)
T ss_dssp GGGGTTSCEEEEEECTTCHHHHHHH
T ss_pred hHHhCCCEEEEEEEcccCHhHHHHH
Confidence 3344467788889999999998874
No 115
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=41.06 E-value=17 Score=25.51 Aligned_cols=21 Identities=10% Similarity=0.335 Sum_probs=17.9
Q ss_pred CCceEEEEEEEeCChhhHHHH
Q 043330 10 PGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi 30 (225)
.+++-|-.||-+-||.|+.+.
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~ 52 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIA 52 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHh
Confidence 567788889999999999884
No 116
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=40.98 E-value=14 Score=27.59 Aligned_cols=44 Identities=16% Similarity=0.252 Sum_probs=28.8
Q ss_pred CCCCCceEEEEEEEeCChh-hHHHHHHhhHHHHhhccccc--eEEEEEE
Q 043330 7 PAKPGNVNLSVYYETLSPT-CSNFIVKNLEGVFNNDLISI--INLRLVP 52 (225)
Q Consensus 7 ~~~~~kV~V~vyyESlCPd-s~~Fi~~qL~p~~~~~l~~~--vdl~lvP 52 (225)
+.-..|+.|-.|+-+-||. |+..+. .|..++. ++.+. -++++|-
T Consensus 31 ~~~~gk~vll~f~~~~C~~~C~~~~~-~l~~~~~-~~~~~~~~~v~vv~ 77 (172)
T 2k6v_A 31 SQFQDKVVLLFFGFTRCPDVCPTTLL-ALKRAYE-KLPPKAQERVQVIF 77 (172)
T ss_dssp GGSTTSEEEEEEECTTCSSHHHHHHH-HHHHHHT-TSCHHHHTTEEEEE
T ss_pred HHhCCCEEEEEEECCCCcchhHHHHH-HHHHHHH-HhhhhccCCEEEEE
Confidence 3345678888999999997 998753 4666665 45542 1455543
No 117
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=40.89 E-value=10 Score=28.66 Aligned_cols=16 Identities=0% Similarity=0.181 Sum_probs=14.7
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.||.-+.||+|.+.
T Consensus 15 ~Vvvysk~~Cp~C~~a 30 (127)
T 3l4n_A 15 PIIIFSKSTCSYSKGM 30 (127)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEEcCCCccHHHH
Confidence 5999999999999887
No 118
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=40.82 E-value=34 Score=25.39 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=20.5
Q ss_pred chhHHHHHHHHhhccCCCCCceeeEEEECCeech
Q 043330 134 NGTKLLLQHAYETSHLIPPHTILPWVLVNNQAIR 167 (225)
Q Consensus 134 ~G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 167 (225)
.|.++..+..+++. ...||.|+|||+++.
T Consensus 78 ~~~~~~~~L~~~~g-----~~tVP~vfi~g~~ig 106 (129)
T 3ctg_A 78 NGSEIQDALEEISG-----QKTVPNVYINGKHIG 106 (129)
T ss_dssp THHHHHHHHHHHHS-----CCSSCEEEETTEEEE
T ss_pred CHHHHHHHHHHHhC-----CCCCCEEEECCEEEc
Confidence 45566655655553 367999999999875
No 119
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=40.76 E-value=47 Score=22.95 Aligned_cols=29 Identities=14% Similarity=0.252 Sum_probs=21.1
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..++-|-.||-+-||.|+.+. ..|..+..
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~-p~l~~l~~ 51 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIA-PMIEKFSE 51 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred cCCEEEEEEECCcCHhHHHHH-HHHHHHHH
Confidence 467788889999999999885 23444443
No 120
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=40.69 E-value=42 Score=23.35 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=20.6
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..++-|-.||-+-||.|+.+.. .|..+..
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~-~~~~~~~ 48 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAP-EFELLAR 48 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHH-HHHHHHH
Confidence 4567788899999999999842 2444433
No 121
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=40.56 E-value=44 Score=23.45 Aligned_cols=33 Identities=3% Similarity=-0.051 Sum_probs=23.0
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
..++-|-.||-+-||.|+.+.. .|..+.. ++.+
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p-~l~~l~~-~~~~ 62 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKP-FFHSLSE-KYSN 62 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHT-TCTT
T ss_pred CCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HCCC
Confidence 5677888899999999998842 3444443 3444
No 122
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=40.01 E-value=31 Score=25.44 Aligned_cols=28 Identities=18% Similarity=0.127 Sum_probs=19.3
Q ss_pred hhHHHHHHHHhhccCCCCCceeeEEEECCeech
Q 043330 135 GTKLLLQHAYETSHLIPPHTILPWVLVNNQAIR 167 (225)
Q Consensus 135 G~~Ll~~~~~~T~~l~P~~~~VPwI~iNG~~~~ 167 (225)
+.++.....+.|. ...||.|+|||+++.
T Consensus 59 ~~~~~~~l~~~sg-----~~tvP~vfI~g~~iG 86 (121)
T 3gx8_A 59 DPELREGIKEFSE-----WPTIPQLYVNKEFIG 86 (121)
T ss_dssp CHHHHHHHHHHHT-----CCSSCEEEETTEEEE
T ss_pred CHHHHHHHHHHhC-----CCCCCeEEECCEEEe
Confidence 3455555555553 367999999999875
No 123
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=39.87 E-value=13 Score=25.78 Aligned_cols=16 Identities=19% Similarity=0.517 Sum_probs=14.0
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
.|.+|+-+-||+|++.
T Consensus 13 ~v~~f~~~~C~~C~~~ 28 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKT 28 (105)
T ss_dssp CEEEEECSSCHHHHHH
T ss_pred CEEEEEcCCCHhHHHH
Confidence 4788999999999875
No 124
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=39.18 E-value=42 Score=24.44 Aligned_cols=21 Identities=14% Similarity=0.422 Sum_probs=17.9
Q ss_pred CCceEEEEEEEeCChhhHHHH
Q 043330 10 PGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi 30 (225)
..++-|-.||-+-||.|+.+.
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~ 43 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAME 43 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHH
T ss_pred CCCcEEEEEECCCChhHHHHH
Confidence 367778889999999999984
No 125
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=39.17 E-value=21 Score=25.67 Aligned_cols=25 Identities=12% Similarity=0.406 Sum_probs=20.5
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHH
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi 30 (225)
++.-..++.|-.||-+-||.|+..+
T Consensus 22 l~~~~gk~vll~F~a~~C~~C~~~~ 46 (142)
T 3ewl_A 22 MSRLKAQYTMLFFYDPDCSNCRKFE 46 (142)
T ss_dssp GGGCCCSEEEEEECCSSCHHHHHHH
T ss_pred hhhcCCCEEEEEEECCCCccHHHHH
Confidence 4444678888889999999999985
No 126
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=39.13 E-value=38 Score=26.14 Aligned_cols=43 Identities=12% Similarity=0.064 Sum_probs=27.6
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++.-..|+.|-.|+-+-||.|+..+ ..|..+++ ++.+. ++++|
T Consensus 43 l~~~~Gk~vll~F~atwC~~C~~~~-~~l~~l~~-~~~~~-~v~vv 85 (190)
T 2vup_A 43 LVQHKGSPLLIYNVASKCGYTKGGY-ETATTLYN-KYKSQ-GFTVL 85 (190)
T ss_dssp GGGGTTSCEEEEEECSSSTTHHHHH-HHHHHHHH-HHGGG-TCEEE
T ss_pred HHHcCCCEEEEEEecCCCCccHHHH-HHHHHHHH-HHhcC-CeEEE
Confidence 4444567788888889999998875 33555555 44442 24443
No 127
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=38.99 E-value=43 Score=23.89 Aligned_cols=29 Identities=3% Similarity=0.069 Sum_probs=20.9
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..++-|-.||-+-||.|+.+.. .|..+..
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~-~l~~l~~ 65 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAP-FFADLAK 65 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred cCCEEEEEEECCCCHHHHHHHH-HHHHHHH
Confidence 4677888899999999999853 2444433
No 128
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=38.89 E-value=8.9 Score=26.06 Aligned_cols=17 Identities=18% Similarity=0.405 Sum_probs=14.8
Q ss_pred eEEEEEEEeCChhhHHH
Q 043330 13 VNLSVYYETLSPTCSNF 29 (225)
Q Consensus 13 V~V~vyyESlCPds~~F 29 (225)
.+|.||+-+.||+|++.
T Consensus 12 ~~v~ly~~~~Cp~C~~~ 28 (92)
T 3ic4_A 12 AEVLMYGLSTCPHCKRT 28 (92)
T ss_dssp SSSEEEECTTCHHHHHH
T ss_pred ceEEEEECCCChHHHHH
Confidence 45899999999999885
No 129
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=38.78 E-value=11 Score=27.17 Aligned_cols=16 Identities=6% Similarity=0.407 Sum_probs=12.8
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.||.-+-||+|.+.
T Consensus 18 ~v~vy~~~~Cp~C~~a 33 (114)
T 3h8q_A 18 RVVIFSKSYCPHSTRV 33 (114)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEEcCCCCcHHHH
Confidence 5778888889998765
No 130
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=38.78 E-value=47 Score=22.68 Aligned_cols=29 Identities=3% Similarity=-0.027 Sum_probs=21.0
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..++-|-.||-+-||.|+.+.. .|..+..
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~-~l~~~~~ 51 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAP-KYEKLAE 51 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHCH-HHHHHHH
Confidence 5677788899999999998853 2444443
No 131
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=38.78 E-value=42 Score=23.59 Aligned_cols=33 Identities=12% Similarity=0.209 Sum_probs=22.2
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
..++-|-.||-+-||.|+.+.. .|..+.. ++.+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p-~l~~~~~-~~~~ 61 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQP-HLTKLIQ-AYPD 61 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHH-HHHHHHH-HCTT
T ss_pred CCCEEEEEEECCCCHHHHHHHH-HHHHHHH-HCCC
Confidence 3567788899999999998853 2444443 3444
No 132
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=38.74 E-value=53 Score=22.57 Aligned_cols=29 Identities=7% Similarity=0.181 Sum_probs=20.8
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..++.|-.||-.-||.|+.+.. .|..+..
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~-~l~~l~~ 53 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAP-FYEECSK 53 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHHH-HHHHHHH
Confidence 3567788899999999999843 3444444
No 133
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=38.72 E-value=36 Score=23.54 Aligned_cols=21 Identities=10% Similarity=0.142 Sum_probs=17.6
Q ss_pred CCceEEEEEEEeCChhhHHHH
Q 043330 10 PGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi 30 (225)
..++-|-.||-+-||.|+.+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~ 36 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIA 36 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHH
T ss_pred CCCEEEEEEECCCCHHHHHHH
Confidence 456778888999999999884
No 134
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=37.27 E-value=18 Score=24.94 Aligned_cols=14 Identities=21% Similarity=0.384 Sum_probs=12.0
Q ss_pred EEEEEEEeCChhhH
Q 043330 14 NLSVYYETLSPTCS 27 (225)
Q Consensus 14 ~V~vyyESlCPds~ 27 (225)
+|.||.-+.||+|.
T Consensus 3 ~v~ly~~~~C~~c~ 16 (93)
T 1t1v_A 3 GLRVYSTSVTGSRE 16 (93)
T ss_dssp CEEEEECSSCSCHH
T ss_pred CEEEEEcCCCCCch
Confidence 58899999999993
No 135
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=36.55 E-value=21 Score=26.30 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=22.6
Q ss_pred CCCCCCceEEEEEEEeCChh-hHHHHHHhhHHHHh
Q 043330 6 LPAKPGNVNLSVYYETLSPT-CSNFIVKNLEGVFN 39 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPd-s~~Fi~~qL~p~~~ 39 (225)
++.-..|+.|-.|+-+-||+ |+..+. .|..++.
T Consensus 18 l~~~~gk~vll~f~~~~C~~~C~~~~~-~l~~l~~ 51 (164)
T 2ggt_A 18 DKDYLGQWLLIYFGFTHCPDVCPEELE-KMIQVVD 51 (164)
T ss_dssp GGGGTTCEEEEEEECTTCSSHHHHHHH-HHHHHHH
T ss_pred HHHcCCCEEEEEEEeCCCCchhHHHHH-HHHHHHH
Confidence 33345677888888899998 998753 3444444
No 136
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=36.53 E-value=35 Score=27.24 Aligned_cols=43 Identities=19% Similarity=0.102 Sum_probs=28.1
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++.-..|+-|-.|+-+-||.|+.-+ -.|..+++ ++.+. +|++|
T Consensus 42 l~~~~Gk~vlv~FwatwC~~C~~e~-p~l~~l~~-~~~~~-g~~vv 84 (208)
T 2f8a_A 42 LGSLRGKVLLIENVASLGGTTVRDY-TQMNELQR-RLGPR-GLVVL 84 (208)
T ss_dssp GGGGTTSEEEEEEECSSSTTHHHHH-HHHHHHHH-HHGGG-TEEEE
T ss_pred HHHcCCCEEEEEEECCCCccHHHHH-HHHHHHHH-HccCC-CeEEE
Confidence 4444568888999999999998764 23555555 34432 35554
No 137
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=36.11 E-value=32 Score=26.20 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=28.8
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++.-..|+-|-.|+-+-||.|+..+- .|..+++ ++.+. ++.+|
T Consensus 33 l~~~~Gk~vlv~F~atwC~~C~~~~p-~l~~l~~-~~~~~-~~~vi 75 (180)
T 3kij_A 33 LEKYKGKVSLVVNVASDCQLTDRNYL-GLKELHK-EFGPS-HFSVL 75 (180)
T ss_dssp GGGGTTSEEEEEEECSSSTTHHHHHH-HHHHHHH-HHTTT-SEEEE
T ss_pred HHHcCCCEEEEEEEecCCCCcHHHHH-HHHHHHH-HhccC-CeEEE
Confidence 44446788888999999999998863 3555555 34442 34444
No 138
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=35.95 E-value=15 Score=26.20 Aligned_cols=16 Identities=19% Similarity=0.540 Sum_probs=14.2
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.||.-+-||+|++.
T Consensus 20 ~v~vy~~~~Cp~C~~~ 35 (113)
T 3rhb_A 20 TVVIYSKTWCSYCTEV 35 (113)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEECCCChhHHHH
Confidence 4889999999999876
No 139
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=35.87 E-value=40 Score=24.92 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=23.7
Q ss_pred CCCCCCceEEEEEEEeCChh-hHHHHHHhhHHHHh
Q 043330 6 LPAKPGNVNLSVYYETLSPT-CSNFIVKNLEGVFN 39 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPd-s~~Fi~~qL~p~~~ 39 (225)
++.-..|+.|-.|+-+-||+ |+..+. .|..++.
T Consensus 21 l~~~~gk~vll~F~~~~C~~~C~~~~~-~l~~l~~ 54 (171)
T 2rli_A 21 KADFRGQWVLMYFGFTHCPDICPDELE-KLVQVVR 54 (171)
T ss_dssp TTTTTTSEEEEEEECTTCSSSHHHHHH-HHHHHHH
T ss_pred HHHhCCCEEEEEEEcCCCCchhHHHHH-HHHHHHH
Confidence 44455788888999999998 998753 3444444
No 140
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=35.70 E-value=16 Score=24.67 Aligned_cols=16 Identities=19% Similarity=0.494 Sum_probs=14.1
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.+|+-+.||+|++.
T Consensus 7 ~v~ly~~~~C~~C~~~ 22 (92)
T 2khp_A 7 DVIIYTRPGCPYCARA 22 (92)
T ss_dssp CEEEEECTTCHHHHHH
T ss_pred cEEEEECCCChhHHHH
Confidence 5889999999999875
No 141
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=35.68 E-value=34 Score=26.13 Aligned_cols=43 Identities=14% Similarity=0.100 Sum_probs=28.1
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++.-..|+.|-.|+-+-||.|+..+ ..|..++. ++.+. ++++|
T Consensus 42 l~~~~gk~vll~F~atwC~~C~~~~-~~l~~l~~-~~~~~-~v~vv 84 (183)
T 2obi_A 42 LDKYRGFVCIVTNVASQCGKTEVNY-TQLVDLHA-RYAEC-GLRIL 84 (183)
T ss_dssp GGGGTTSEEEEEEECSSSTTHHHHH-HHHHHHHH-HHGGG-TEEEE
T ss_pred HHHcCCCEEEEEEeCCCCCCcHHHH-HHHHHHHH-HHhcC-CeEEE
Confidence 3334567888888999999999875 33556555 44442 35554
No 142
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=35.45 E-value=23 Score=26.94 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=23.0
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
++.-..|+.|-.||-+-||.|+..+. .|..++.
T Consensus 54 l~~~~gk~vlv~F~a~~C~~C~~~~~-~l~~l~~ 86 (183)
T 3lwa_A 54 LSDFENQVVILNAWGQWCAPCRSESD-DLQIIHE 86 (183)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred HHHhCCCEEEEEEECCcCHhHHHHHH-HHHHHHH
Confidence 33345678888888999999998753 3555544
No 143
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=35.07 E-value=84 Score=22.17 Aligned_cols=21 Identities=14% Similarity=0.363 Sum_probs=17.0
Q ss_pred CCceEEEEEEEe-------CChhhHHHH
Q 043330 10 PGNVNLSVYYET-------LSPTCSNFI 30 (225)
Q Consensus 10 ~~kV~V~vyyES-------lCPds~~Fi 30 (225)
..++-|-.||-+ -||+|+.+.
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~ 50 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAE 50 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHH
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhh
Confidence 366777788888 999999884
No 144
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=34.62 E-value=33 Score=26.02 Aligned_cols=30 Identities=17% Similarity=0.216 Sum_probs=22.4
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
-..|+.|-.||-+-||.|+..+.. |..++.
T Consensus 58 ~~gk~vll~F~a~~C~~C~~~~~~-l~~l~~ 87 (186)
T 1jfu_A 58 FRGKTLLVNLWATWCVPCRKEMPA-LDELQG 87 (186)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHH-HHHHHH
T ss_pred cCCCEEEEEEEeCCCHhHHHHHHH-HHHHHH
Confidence 356788888899999999988643 555555
No 145
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=34.05 E-value=63 Score=22.26 Aligned_cols=22 Identities=14% Similarity=0.270 Sum_probs=18.6
Q ss_pred CCCceEEEEEEEeCChhhHHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi 30 (225)
...++-|-.||-+-||.|+.+.
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~ 44 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALA 44 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHH
T ss_pred cCCCCEEEEEECCCCHhHHHhh
Confidence 3567788899999999999985
No 146
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=33.96 E-value=15 Score=26.38 Aligned_cols=14 Identities=7% Similarity=0.275 Sum_probs=11.7
Q ss_pred ceeeEEEECCeech
Q 043330 154 TILPWVLVNNQAIR 167 (225)
Q Consensus 154 ~~VPwI~iNG~~~~ 167 (225)
..||.|+|||+++.
T Consensus 72 ~tvP~ifi~g~~iG 85 (109)
T 3ipz_A 72 PTFPQLYIGGEFFG 85 (109)
T ss_dssp SSSCEEEETTEEEE
T ss_pred CCCCeEEECCEEEe
Confidence 67899999999864
No 147
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=40.21 E-value=8.6 Score=27.73 Aligned_cols=26 Identities=12% Similarity=0.221 Sum_probs=19.3
Q ss_pred CCCC-CCCc-eEEEEEEEeCChhhHHHH
Q 043330 5 SLPA-KPGN-VNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 5 ~~~~-~~~k-V~V~vyyESlCPds~~Fi 30 (225)
+++. -..+ +-|-.|+-+-||.|+.++
T Consensus 18 ~l~~~~~gk~~vll~F~a~wC~~C~~~~ 45 (143)
T 2lus_A 18 NANEALKDKDIIGFYFSAHWCPPCRGFT 45 (143)
Confidence 3444 4456 778888889999998875
No 148
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=33.76 E-value=18 Score=25.96 Aligned_cols=17 Identities=18% Similarity=0.497 Sum_probs=14.8
Q ss_pred eEEEEEEEeCChhhHHH
Q 043330 13 VNLSVYYETLSPTCSNF 29 (225)
Q Consensus 13 V~V~vyyESlCPds~~F 29 (225)
-.|.+|+-+-||+|++.
T Consensus 19 ~~vv~f~~~~Cp~C~~~ 35 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNA 35 (114)
T ss_dssp TCEEEEECTTCHHHHHH
T ss_pred CCEEEEEeCCChhHHHH
Confidence 46899999999999876
No 149
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=33.57 E-value=67 Score=20.17 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=12.9
Q ss_pred eEEEEEEEeCChhhHHHH
Q 043330 13 VNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 13 V~V~vyyESlCPds~~Fi 30 (225)
+.|.+|. +-||.|+.+.
T Consensus 2 ~~v~f~a-~wC~~C~~~~ 18 (77)
T 1ilo_A 2 MKIQIYG-TGCANCQMLE 18 (77)
T ss_dssp EEEEEEC-SSSSTTHHHH
T ss_pred cEEEEEc-CCChhHHHHH
Confidence 4666666 6999999874
No 150
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=33.50 E-value=26 Score=24.13 Aligned_cols=22 Identities=5% Similarity=0.184 Sum_probs=16.6
Q ss_pred CCCceEEEEEEEeCChhhHHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi 30 (225)
..+++-|-.||-+-||.|+.+.
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~ 40 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALK 40 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHH
Confidence 4567788899999999999984
No 151
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=33.43 E-value=67 Score=21.87 Aligned_cols=28 Identities=7% Similarity=0.140 Sum_probs=20.2
Q ss_pred CceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 11 GNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
+++.|-.||.+-||.|+.+.. .|..+..
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~-~l~~~~~ 55 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAP-VFAEYAK 55 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCEEEEEEECCCCHhHHHHhH-HHHHHHH
Confidence 567788899999999999852 3444433
No 152
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=33.11 E-value=60 Score=25.18 Aligned_cols=22 Identities=23% Similarity=0.208 Sum_probs=18.5
Q ss_pred CCCceEEEEEEEeCChhhHHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi 30 (225)
...++.|-.|+.+=||+|+.++
T Consensus 52 ~~~k~vvv~F~A~WC~pC~~~~ 73 (167)
T 1z6n_A 52 IERRYRLLVAGEMWCPDCQINL 73 (167)
T ss_dssp CCSCEEEEEECCTTCHHHHHHH
T ss_pred hCCCEEEEEEECCCChhHHHHH
Confidence 3467888889999999999874
No 153
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=32.97 E-value=47 Score=23.39 Aligned_cols=22 Identities=14% Similarity=0.184 Sum_probs=17.9
Q ss_pred CCCceEEEEEEEeCChhhHHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi 30 (225)
..+++-|-.||-+-||.|+.+.
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~ 52 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIG 52 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHH
T ss_pred cCCCEEEEEEECCCCHhHHHHH
Confidence 3456778888999999999885
No 154
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=32.92 E-value=78 Score=20.90 Aligned_cols=29 Identities=14% Similarity=0.367 Sum_probs=21.0
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
.+++-|-.||-+-||.|+.+.. .|..+..
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~-~l~~~~~ 46 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAP-KVEALAK 46 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHhhH-HHHHHHH
Confidence 5677788889999999999853 3444433
No 155
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=32.87 E-value=68 Score=22.51 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=20.7
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..++.|-.||-+-||.|+.+. ..|..+..
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~-~~l~~l~~ 50 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLG-QILPSIAE 50 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHH-HHHHHHHH
Confidence 356788889999999999884 23444443
No 156
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=32.54 E-value=61 Score=22.85 Aligned_cols=29 Identities=14% Similarity=0.213 Sum_probs=21.2
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..++-|-.||-+-||.|+.+.-. |..+..
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~-~~~~~~ 52 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPI-YTSLGK 52 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHH-HHHHHH
T ss_pred CCCcEEEEEECCCChhHHHHHHH-HHHHHH
Confidence 46778888999999999998532 444433
No 157
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.39 E-value=54 Score=23.01 Aligned_cols=21 Identities=19% Similarity=0.425 Sum_probs=17.8
Q ss_pred CCceEEEEEEEeCChhhHHHH
Q 043330 10 PGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi 30 (225)
..++-|-.||-+-||.|+.+.
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~ 44 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLE 44 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHH
T ss_pred CCCeEEEEEECCCCHHHHhhc
Confidence 457788889999999999884
No 158
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=32.30 E-value=78 Score=22.96 Aligned_cols=34 Identities=6% Similarity=0.119 Sum_probs=23.5
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
...++-|-.||-+-||.|+.+. ..|..+.. .+.+
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~-p~l~~~~~-~~~~ 86 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFA-PIFAETAA-ERAG 86 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHH-HHHHHHHH-HTTT
T ss_pred hcCCcEEEEEECCCCHHHHHHH-HHHHHHHH-HcCC
Confidence 4567778889999999999984 33444444 3444
No 159
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=31.94 E-value=19 Score=25.39 Aligned_cols=16 Identities=0% Similarity=0.125 Sum_probs=13.1
Q ss_pred EEEEEEE-----eCChhhHHH
Q 043330 14 NLSVYYE-----TLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyE-----SlCPds~~F 29 (225)
+|.||+- +-||+|++.
T Consensus 18 ~vvvf~~g~~~~~~C~~C~~~ 38 (105)
T 2yan_A 18 SVMLFMKGNKQEAKCGFSKQI 38 (105)
T ss_dssp SEEEEESBCSSSBCTTHHHHH
T ss_pred CEEEEEecCCCCCCCccHHHH
Confidence 4778888 899999865
No 160
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=31.71 E-value=20 Score=25.56 Aligned_cols=16 Identities=0% Similarity=0.125 Sum_probs=13.8
Q ss_pred EEEEEEE-----eCChhhHHH
Q 043330 14 NLSVYYE-----TLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyE-----SlCPds~~F 29 (225)
+|.||+. +.||+|++.
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~a 36 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQI 36 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHH
T ss_pred CEEEEEecCCCCCCCchHHHH
Confidence 4889999 899999876
No 161
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=31.34 E-value=82 Score=21.87 Aligned_cols=29 Identities=7% Similarity=0.103 Sum_probs=20.7
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
.+++.|-.||-+-||.|+.+.. .|..+..
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~-~l~~~~~ 64 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAP-KYEKLAE 64 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHhH-HHHHHHH
Confidence 4667788889999999998853 2444433
No 162
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=30.42 E-value=19 Score=26.14 Aligned_cols=14 Identities=21% Similarity=0.344 Sum_probs=11.6
Q ss_pred ceeeEEEECCeech
Q 043330 154 TILPWVLVNNQAIR 167 (225)
Q Consensus 154 ~~VPwI~iNG~~~~ 167 (225)
..||.|+|||+++.
T Consensus 70 ~tvP~ifi~g~~iG 83 (111)
T 3zyw_A 70 PTYPQLYVSGELIG 83 (111)
T ss_dssp CSSCEEEETTEEEE
T ss_pred CCCCEEEECCEEEe
Confidence 56899999998875
No 163
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=30.32 E-value=96 Score=22.20 Aligned_cols=32 Identities=16% Similarity=0.176 Sum_probs=21.1
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
.++ -|-.||-+-||.|+.+. ..|..+.. ++.+
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~-~~l~~l~~-~~~~ 81 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVS-PILEELAR-DHAG 81 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHH-HHHHHHHH-HTTT
T ss_pred CCC-EEEEEECCCCHHHHHHH-HHHHHHHH-HccC
Confidence 445 67778889999999984 33444444 4444
No 164
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=30.23 E-value=35 Score=23.22 Aligned_cols=22 Identities=5% Similarity=0.069 Sum_probs=18.2
Q ss_pred CCCceEEEEEEEeCChhhHHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi 30 (225)
..+++.|-.||-+-||.|+.+.
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~ 40 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIA 40 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHH
T ss_pred CCCCEEEEEEECCCChhhHHHH
Confidence 3567788899999999999884
No 165
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=30.13 E-value=15 Score=24.74 Aligned_cols=16 Identities=19% Similarity=0.470 Sum_probs=14.0
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|.+|+-+.||+|++.
T Consensus 7 ~v~~y~~~~C~~C~~~ 22 (89)
T 2klx_A 7 EIILYTRPNCPYCKRA 22 (89)
T ss_dssp CEEEESCSCCTTTHHH
T ss_pred eEEEEECCCChhHHHH
Confidence 5889999999999875
No 166
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=29.66 E-value=27 Score=24.39 Aligned_cols=16 Identities=19% Similarity=0.409 Sum_probs=13.3
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
.|.+||-+-||+|+.+
T Consensus 21 ~vv~f~a~~C~~C~~~ 36 (116)
T 2e7p_A 21 PVVVFSKTYCGYCNRV 36 (116)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEECCCChhHHHH
Confidence 3566999999999876
No 167
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=29.31 E-value=69 Score=23.29 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=17.2
Q ss_pred CCCceEEEEEEEeCChhhHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNF 29 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~F 29 (225)
......|.+|+-.-||.|...
T Consensus 26 ~~~m~~vv~y~~~~C~~C~~a 46 (107)
T 2fgx_A 26 QVEPRKLVVYGREGCHLCEEM 46 (107)
T ss_dssp CCCCCCEEEEECSSCHHHHHH
T ss_pred CCCccEEEEEeCCCChhHHHH
Confidence 334567999999999999876
No 168
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=28.78 E-value=48 Score=29.18 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=27.5
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
+..-..|+.|-.||-+-||.|+..+- .|..+++ ++.+. ++.+|
T Consensus 77 Lsdl~GK~vLl~F~atwC~~C~~~~p-~L~~l~~-~~~~~-~v~vi 119 (352)
T 2hyx_A 77 LKSLRGKVVLIDFWAYSCINCQRAIP-HVVGWYQ-AYKDS-GLAVI 119 (352)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHH-HHHHHHH-HHGGG-TEEEE
T ss_pred HHHhCCCEEEEEEECCCChhHHHHHH-HHHHHHH-HhhcC-CeEEE
Confidence 44445678888888899999998753 3555554 34431 34444
No 169
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=28.74 E-value=38 Score=24.86 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=25.4
Q ss_pred CCc-eEEEEEE-EeCChhhHHHHHHhhHHHHhhccccceEEEEEEE
Q 043330 10 PGN-VNLSVYY-ETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPW 53 (225)
Q Consensus 10 ~~k-V~V~vyy-ESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~ 53 (225)
..+ +.|-.|| -+-||.|+..+. .|..++. ++.+ -++++|-.
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~-~l~~~~~-~~~~-~~~~vv~i 76 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELD-QLRDHLP-EFEN-DDSAALAI 76 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHH-HHHHTGG-GTSS-SSEEEEEE
T ss_pred cCCCCEEEEEECCCCCCchHHHHH-HHHHHHH-HHHH-CCcEEEEE
Confidence 344 6677776 999999988753 3555555 4543 24555543
No 170
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=28.07 E-value=22 Score=26.30 Aligned_cols=14 Identities=21% Similarity=0.432 Sum_probs=11.5
Q ss_pred ceeeEEEECCeech
Q 043330 154 TILPWVLVNNQAIR 167 (225)
Q Consensus 154 ~~VPwI~iNG~~~~ 167 (225)
..||.|+|||+++.
T Consensus 75 ~tvP~vfI~g~~IG 88 (118)
T 2wem_A 75 PTIPQVYLNGEFVG 88 (118)
T ss_dssp CSSCEEEETTEEEE
T ss_pred CCcCeEEECCEEEe
Confidence 56899999998864
No 171
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=27.46 E-value=84 Score=23.45 Aligned_cols=22 Identities=9% Similarity=0.220 Sum_probs=17.9
Q ss_pred CCCceEEEEEEEeCChhhHHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi 30 (225)
..+++-|-.||-+-||.|+.+.
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~ 83 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMA 83 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHH
T ss_pred hCCCcEEEEEECCCCHHHHHHH
Confidence 3466778888899999999984
No 172
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=27.33 E-value=38 Score=23.65 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=16.5
Q ss_pred CceEEEEEEEeCChhhHHHH
Q 043330 11 GNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi 30 (225)
.+.-|-.||-+-||+|+.+.
T Consensus 29 ~~~~~v~f~a~wC~~C~~~~ 48 (118)
T 1zma_A 29 KETATFFIGRKTCPYCRKFA 48 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHH
T ss_pred CCeEEEEEECCCCccHHHHH
Confidence 35678888999999999984
No 173
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=27.23 E-value=43 Score=23.16 Aligned_cols=19 Identities=21% Similarity=0.495 Sum_probs=16.5
Q ss_pred CceEEEEEEEeCChhhHHH
Q 043330 11 GNVNLSVYYETLSPTCSNF 29 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~F 29 (225)
.+..|-.||-+-||.|+.+
T Consensus 19 ~~~~vv~f~a~wC~~C~~~ 37 (110)
T 2l6c_A 19 LSDAIVFFHKNLCPHCKNM 37 (110)
T ss_dssp CSEEEEEEECSSCSTHHHH
T ss_pred CCCEEEEEECCCCHhHHHH
Confidence 4667888999999999987
No 174
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=33.08 E-value=13 Score=27.49 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=19.3
Q ss_pred CCCCCCceEEEEEEEeCChhhHHHH
Q 043330 6 LPAKPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 6 ~~~~~~kV~V~vyyESlCPds~~Fi 30 (225)
++.-..|+.|-.||-+-||.|+..+
T Consensus 28 l~~~~gk~vll~f~a~~C~~C~~~~ 52 (159)
T 2ls5_A 28 LSSLRGKVVMLQFTASWCGVCRKEM 52 (159)
Confidence 4444567778888899999998875
No 175
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=26.91 E-value=60 Score=25.80 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=28.2
Q ss_pred CCCceEEEEEEEeCChhhHHHHHHhh--HHHHhhccccceEEEEEEE
Q 043330 9 KPGNVNLSVYYETLSPTCSNFIVKNL--EGVFNNDLISIINLRLVPW 53 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi~~qL--~p~~~~~l~~~vdl~lvP~ 53 (225)
...++.|.-||---||.|.+|-- .| .+-+...+.+.+.|..+|.
T Consensus 111 ~~~~~~vveFf~~~C~~C~~~~p-~~~~~~~l~~~~~~~v~~~~~~v 156 (197)
T 1un2_A 111 VAGAPQVLEFFSFFCPHCYQFEE-VLHISDNVKKKLPEGVKMTKYHV 156 (197)
T ss_dssp CTTCCSEEEEECTTCHHHHHHHH-TSCHHHHHTTSSCTTCCEEEEEC
T ss_pred CCCCCEEEEEECCCChhHHHhCc-ccccHHHHHHHCCCCCEEEEecc
Confidence 34567788888899999999932 12 1333334556666766664
No 176
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=26.37 E-value=45 Score=25.35 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=21.9
Q ss_pred CCCCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
....|+.|-.||-+-||.|+..+. .|..+++
T Consensus 55 ~~~gk~vll~F~a~~C~~C~~~~~-~l~~l~~ 85 (176)
T 3kh7_A 55 DLKGKPALVNVWGTWCPSCRVEHP-ELTRLAE 85 (176)
T ss_dssp GGCSSCEEEEEECTTCHHHHHHHH-HHHHHHH
T ss_pred HhCCCEEEEEEECCcCHHHHHHHH-HHHHHHH
Confidence 334677888889999999998853 3444444
No 177
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=26.02 E-value=51 Score=24.01 Aligned_cols=21 Identities=14% Similarity=0.126 Sum_probs=17.2
Q ss_pred CCceEEEEEEEeCChhhHHHH
Q 043330 10 PGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi 30 (225)
..++-|-.||-+-||.|+.+.
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~ 49 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVN 49 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEEEECCCChHHHHHH
Confidence 346778889999999999883
No 178
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=25.96 E-value=36 Score=25.32 Aligned_cols=44 Identities=11% Similarity=0.181 Sum_probs=26.3
Q ss_pred CCCCCCce-EEEEEE-EeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 6 LPAKPGNV-NLSVYY-ETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 6 ~~~~~~kV-~V~vyy-ESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
++.-..++ .|-.|| -+-||.|+..+. .|..+++ ++.+. ++++|-
T Consensus 23 l~~~~gk~~vvl~F~~a~~C~~C~~~~~-~l~~~~~-~~~~~-~v~vv~ 68 (161)
T 3drn_A 23 LSDYIGKHNIVLYFYPKDDTPGSTREAS-AFRDNWD-LLKDY-DVVVIG 68 (161)
T ss_dssp GGGTTTTSEEEEEECSCTTCHHHHHHHH-HHHHTHH-HHHTT-CEEEEE
T ss_pred HHHhcCCCCEEEEEEcCCCCCchHHHHH-HHHHHHH-HHHHc-CCEEEE
Confidence 33344565 566666 899999999753 3555555 34432 345543
No 179
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=25.65 E-value=63 Score=22.88 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=19.4
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhH
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLE 35 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~ 35 (225)
..++-|-.||-+-||+|+.+.. .|.
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~-~l~ 52 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDK-SLR 52 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHH-HHT
T ss_pred cCCcEEEEEcCCCCHHHHHHHH-HhC
Confidence 3567788889999999999864 344
No 180
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.47 E-value=28 Score=25.68 Aligned_cols=16 Identities=13% Similarity=0.293 Sum_probs=13.8
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
.|.||+-.-||+|++.
T Consensus 28 ~vvvf~~~~Cp~C~~~ 43 (130)
T 2cq9_A 28 CVVIFSKTSCSYCTMA 43 (130)
T ss_dssp SEEEEECSSCSHHHHH
T ss_pred cEEEEEcCCChHHHHH
Confidence 4778999999999875
No 181
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=25.38 E-value=30 Score=26.56 Aligned_cols=44 Identities=14% Similarity=0.356 Sum_probs=27.8
Q ss_pred CCCCCCceEEEEEE-EeCChhhHHHHHHhhHHHHhhccccceEEEEEE
Q 043330 6 LPAKPGNVNLSVYY-ETLSPTCSNFIVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 6 ~~~~~~kV~V~vyy-ESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP 52 (225)
++.-..++.|-.|| -+-||.|+..+. .|..++. ++.+. ++++|-
T Consensus 26 l~~~~gk~vvl~F~~a~~C~~C~~~~~-~l~~~~~-~~~~~-~v~vv~ 70 (187)
T 1we0_A 26 EADLKGKWSIVVFYPADFSFVCPTELE-DVQKEYA-ELKKL-GVEVYS 70 (187)
T ss_dssp TTTTSSSEEEEEECSCTTCSSCTHHHH-HHHHHHH-HHHHT-TEEEEE
T ss_pred HHHHCCCCEEEEEECCCCCcchHHHHH-HHHHHHH-HHHHc-CCEEEE
Confidence 44445678888888 999999998753 3555554 34432 445543
No 182
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=25.35 E-value=54 Score=23.40 Aligned_cols=21 Identities=19% Similarity=0.433 Sum_probs=17.6
Q ss_pred CCceEEEEEEEeCChhhHHHH
Q 043330 10 PGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi 30 (225)
..++-|-.||-+-||.|+.+.
T Consensus 33 ~~~~vlv~f~a~wC~~C~~~~ 53 (140)
T 2dj1_A 33 DKDTVLLEFYAPWCGHCKQFA 53 (140)
T ss_dssp TCSEEEEEECCTTCHHHHTTH
T ss_pred cCCeEEEEEECCCCHHHHHhh
Confidence 357778889999999999884
No 183
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=25.23 E-value=35 Score=29.38 Aligned_cols=21 Identities=5% Similarity=0.112 Sum_probs=18.4
Q ss_pred CCCceEEEEEEEeCChhhHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNF 29 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~F 29 (225)
..+++.|+||.-.-||+|.+.
T Consensus 40 ~~~~~~VelyTs~gCp~C~~A 60 (270)
T 2axo_A 40 EAVKGVVELFTSQGCASCPPA 60 (270)
T ss_dssp SCCCCEEEEEECTTCTTCHHH
T ss_pred cCCCcEEEEEeCCCCCChHHH
Confidence 455699999999999999977
No 184
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=25.07 E-value=1.6e+02 Score=19.70 Aligned_cols=22 Identities=9% Similarity=0.134 Sum_probs=18.3
Q ss_pred CCCceEEEEEEEeCChhhHHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi 30 (225)
...++-|-.||-+-||.|+.+.
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~ 37 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVML 37 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHH
T ss_pred hcCCCEEEEEeCCCCcchHHHH
Confidence 3567788889999999999973
No 185
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=24.78 E-value=30 Score=25.08 Aligned_cols=16 Identities=13% Similarity=0.021 Sum_probs=14.2
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
+|+||+-..||+|++.
T Consensus 1 ~i~iY~~~~C~~C~ka 16 (114)
T 1rw1_A 1 TYVLYGIKACDTMKKA 16 (114)
T ss_dssp CEEEEECSSCHHHHHH
T ss_pred CEEEEECCCChHHHHH
Confidence 3789999999999877
No 186
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=24.65 E-value=27 Score=24.82 Aligned_cols=28 Identities=14% Similarity=0.375 Sum_probs=21.4
Q ss_pred CceEEEEEEEeCChhhHHHHHHhhHHHHhhcccc
Q 043330 11 GNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLIS 44 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~ 44 (225)
.++.|..||-+-||.|+.+ .|+|+ ++.+
T Consensus 12 ~k~~vV~F~A~WC~~C~~~-----~p~~~-~~a~ 39 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQ-----KELFG-AAFD 39 (106)
T ss_dssp HHHTCEEEECTTCHHHHHH-----HHHHG-GGGG
T ss_pred CCCEEEEEECCCCHHHHHH-----HHHHH-HHHH
Confidence 4566788999999999987 57776 4544
No 187
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=24.43 E-value=84 Score=24.62 Aligned_cols=29 Identities=10% Similarity=0.133 Sum_probs=20.8
Q ss_pred CCCceEEEEEEEe-CChhhHHHHHHhhHHHHh
Q 043330 9 KPGNVNLSVYYET-LSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 9 ~~~kV~V~vyyES-lCPds~~Fi~~qL~p~~~ 39 (225)
...+|.|.+|+.. -||.|... .++.|.|.
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c--~~~~~~~~ 48 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTA--EELLKETV 48 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHH--HHHHHHHH
T ss_pred ccCCeEEEEEccCCCCcccHHH--HHHHHHHH
Confidence 3567888888766 58888776 55677766
No 188
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=23.83 E-value=48 Score=26.33 Aligned_cols=43 Identities=16% Similarity=0.118 Sum_probs=26.8
Q ss_pred CCCCCCc-eEEEEEEEeCChhhHHHHHHhhHHHHhhccccceEEEEE
Q 043330 6 LPAKPGN-VNLSVYYETLSPTCSNFIVKNLEGVFNNDLISIINLRLV 51 (225)
Q Consensus 6 ~~~~~~k-V~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lv 51 (225)
++.-..+ |.|-.|+-+-||.|+..+. .|..+++ ++.+. ++++|
T Consensus 53 l~~~~gk~~vll~F~a~~C~~C~~~~~-~l~~l~~-~~~~~-~v~vv 96 (218)
T 3u5r_E 53 LAEFKDSPALLVAFISNRCPFVVLIRE-ALAKFAG-DYAGQ-GLAVV 96 (218)
T ss_dssp GGGGTTCSEEEEEECCSSCHHHHTTHH-HHHHHHH-HHTTT-TEEEE
T ss_pred HHHhCCCCeEEEEEECCCCccHHHHHH-HHHHHHH-HHHhC-CcEEE
Confidence 3333445 5777888899999987753 3666665 45442 34554
No 189
>1uvq_C Orexin; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens}
Probab=22.79 E-value=43 Score=19.27 Aligned_cols=18 Identities=22% Similarity=0.451 Sum_probs=14.7
Q ss_pred ccCCCCCceeeEEEECCe
Q 043330 147 SHLIPPHTILPWVLVNNQ 164 (225)
Q Consensus 147 ~~l~P~~~~VPwI~iNG~ 164 (225)
+++.|+.+-|||-.|.|-
T Consensus 4 dsMN~pSTKVsWAaVtgg 21 (33)
T 1uvq_C 4 DSMNLPSTKVSWAAVGGG 21 (33)
T ss_pred cccCCCccccceEEecCC
Confidence 467788999999999763
No 190
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=22.55 E-value=1.3e+02 Score=23.73 Aligned_cols=34 Identities=9% Similarity=0.192 Sum_probs=23.7
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHhhccccc
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFNNDLISI 45 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~~~l~~~ 45 (225)
..++-|-.||-+-||.|+.+. ..|..+.. .+.+.
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~-p~l~~l~~-~~~~~ 62 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIA-PILDEIAD-EYQGK 62 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHH-HHHHHHHH-HTTTT
T ss_pred cCCEEEEEEECCcCHHHHHHH-HHHHHHHH-HhcCC
Confidence 567788888999999999884 23444444 45553
No 191
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=22.47 E-value=1.1e+02 Score=23.81 Aligned_cols=23 Identities=17% Similarity=0.351 Sum_probs=19.2
Q ss_pred CCCCceEEEEEEEeCChhhHHHH
Q 043330 8 AKPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 8 ~~~~kV~V~vyyESlCPds~~Fi 30 (225)
....++.|..||-+-||.|+++.
T Consensus 131 ~~~~~~~~v~F~a~wC~~C~~~~ 153 (226)
T 1a8l_A 131 NIDQDVRILVFVTPTCPYCPLAV 153 (226)
T ss_dssp TCCSCEEEEEEECSSCTTHHHHH
T ss_pred hcCCCcEEEEEeCCCCCccHHHH
Confidence 34567779999999999999884
No 192
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=27.95 E-value=18 Score=24.13 Aligned_cols=22 Identities=14% Similarity=0.261 Sum_probs=17.7
Q ss_pred CCCceEEEEEEEeCChhhHHHH
Q 043330 9 KPGNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 9 ~~~kV~V~vyyESlCPds~~Fi 30 (225)
..++.-|-.||.+-||.|+.+.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~ 38 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIA 38 (106)
Confidence 4466778888999999999873
No 193
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=22.22 E-value=63 Score=24.90 Aligned_cols=45 Identities=9% Similarity=0.289 Sum_probs=28.2
Q ss_pred CCCCCCceEEEEEE-EeCChhhHHHHHHhhHHHHhhccccceEEEEEEE
Q 043330 6 LPAKPGNVNLSVYY-ETLSPTCSNFIVKNLEGVFNNDLISIINLRLVPW 53 (225)
Q Consensus 6 ~~~~~~kV~V~vyy-ESlCPds~~Fi~~qL~p~~~~~l~~~vdl~lvP~ 53 (225)
++.-..|+.|-.|| -+-||.|+..+. .|..++. ++.+. ++++|-.
T Consensus 40 l~~~~gk~vvl~F~~a~~C~~C~~~~~-~l~~l~~-~~~~~-~v~vv~V 85 (195)
T 2bmx_A 40 SDEHPGKWRVVFFWPKDFTFVCPTEIA-AFSKLND-EFEDR-DAQILGV 85 (195)
T ss_dssp TTSSTTCEEEEEECSCTTSCCCHHHHH-HHHHTHH-HHHTT-TEEEEEE
T ss_pred HHHhCCCcEEEEEEcCCCCCCcHHHHH-HHHHHHH-HHHHC-CCEEEEE
Confidence 44445677788888 899999998753 3555554 34332 4555533
No 194
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=22.10 E-value=35 Score=26.00 Aligned_cols=16 Identities=13% Similarity=0.293 Sum_probs=13.9
Q ss_pred EEEEEEEeCChhhHHH
Q 043330 14 NLSVYYETLSPTCSNF 29 (225)
Q Consensus 14 ~V~vyyESlCPds~~F 29 (225)
.|.||+-+-||+|++.
T Consensus 50 ~Vvvf~~~~Cp~C~~~ 65 (146)
T 2ht9_A 50 CVVIFSKTSCSYCTMA 65 (146)
T ss_dssp SEEEEECTTCHHHHHH
T ss_pred CEEEEECCCChhHHHH
Confidence 4788999999999875
No 195
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=21.78 E-value=2.1e+02 Score=21.16 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=29.8
Q ss_pred CceEEEEEEEeCChhhHHH--HHHhhHHHHhhccccceEEEEEE
Q 043330 11 GNVNLSVYYETLSPTCSNF--IVKNLEGVFNNDLISIINLRLVP 52 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~F--i~~qL~p~~~~~l~~~vdl~lvP 52 (225)
.+++|+|.|=+.|-+--|. +.+.|..++.+ ++..++++|
T Consensus 7 ~~~~V~I~YC~~C~w~lRa~~laqeLl~tF~~---~l~eV~L~P 47 (108)
T 2ojl_A 7 HPPRIAIQYCTQCQWLLRAAWMAQELLSTFGA---DLGEVALVP 47 (108)
T ss_dssp CCCEEEEEEETTTTCHHHHHHHHHHHHHHHGG---GSSEEEEEE
T ss_pred CCCEEEEEECCCCCChHHHHHHHHHHHHhcCc---ccceEEEEe
Confidence 4688999999999887665 57777777764 345788998
No 196
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=21.72 E-value=59 Score=23.94 Aligned_cols=33 Identities=15% Similarity=0.306 Sum_probs=21.4
Q ss_pred CCCCCCceEEEEEEE-eCChhhHHHHHHhhHHHHh
Q 043330 6 LPAKPGNVNLSVYYE-TLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 6 ~~~~~~kV~V~vyyE-SlCPds~~Fi~~qL~p~~~ 39 (225)
++.-..|+.|-.||- +-||.|+.-+. .|...++
T Consensus 30 l~~~~gk~~vl~F~~~~~c~~C~~~~~-~l~~~~~ 63 (163)
T 3gkn_A 30 LRAHAGHWLVIYFYPKDSTPGATTEGL-DFNALLP 63 (163)
T ss_dssp SGGGTTSCEEEEECSCTTSHHHHHHHH-HHHHHHH
T ss_pred HHHhCCCcEEEEEeCCCCCCcHHHHHH-HHHHHHH
Confidence 444345666666665 89999998853 3555555
No 197
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=21.43 E-value=1.2e+02 Score=21.65 Aligned_cols=29 Identities=7% Similarity=0.151 Sum_probs=20.8
Q ss_pred CCceEEEEEEEeCChhhHHHHHHhhHHHHh
Q 043330 10 PGNVNLSVYYETLSPTCSNFIVKNLEGVFN 39 (225)
Q Consensus 10 ~~kV~V~vyyESlCPds~~Fi~~qL~p~~~ 39 (225)
..++.|-.||-+-||.|+.+... |..+..
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~-l~~l~~ 64 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERP-MEKIAY 64 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHH-HHHHHH
T ss_pred cCCEEEEEEECCcCHhHHHHHHH-HHHHHH
Confidence 45678888999999999988532 444333
No 198
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=20.81 E-value=52 Score=24.75 Aligned_cols=16 Identities=13% Similarity=0.075 Sum_probs=12.6
Q ss_pred CCceeeEEEECCeech
Q 043330 152 PHTILPWVLVNNQAIR 167 (225)
Q Consensus 152 ~~~~VPwI~iNG~~~~ 167 (225)
+..-||-|+|||+++.
T Consensus 61 G~~tvPQIFi~~~~iG 76 (121)
T 1u6t_A 61 GYPLPPQIFNESQYRG 76 (121)
T ss_dssp SSCCSCEEEETTEEEE
T ss_pred CCcCCCEEEECCEEEe
Confidence 3457899999999875
No 199
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=20.15 E-value=1.5e+02 Score=21.60 Aligned_cols=20 Identities=10% Similarity=0.448 Sum_probs=17.4
Q ss_pred CceEEEEEEEeCChhhHHHH
Q 043330 11 GNVNLSVYYETLSPTCSNFI 30 (225)
Q Consensus 11 ~kV~V~vyyESlCPds~~Fi 30 (225)
.++-|-.||-+-||.|+.+.
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~ 51 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMN 51 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHH
T ss_pred CCeEEEEEECCCCHhHHHHH
Confidence 67788899999999999974
Done!