Query 043333
Match_columns 809
No_of_seqs 731 out of 4869
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 06:23:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 7.9E-47 2.7E-51 403.1 14.2 206 575-783 13-235 (299)
2 4aoj_A High affinity nerve gro 100.0 3.6E-46 1.2E-50 403.4 16.6 206 575-783 41-265 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 7E-46 2.4E-50 397.4 16.4 205 576-783 27-252 (308)
4 4fih_A Serine/threonine-protei 100.0 1.9E-45 6.5E-50 397.5 19.5 200 575-783 74-274 (346)
5 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-45 3.9E-50 393.3 17.1 202 575-783 32-238 (311)
6 3omv_A RAF proto-oncogene seri 100.0 2.7E-45 9.3E-50 391.3 18.6 200 574-782 35-240 (307)
7 4b9d_A Serine/threonine-protei 100.0 2.6E-45 8.9E-50 397.0 15.6 204 574-783 23-229 (350)
8 4fie_A Serine/threonine-protei 100.0 2E-44 6.8E-49 399.0 21.8 201 574-783 150-351 (423)
9 3ubd_A Ribosomal protein S6 ki 100.0 6.1E-45 2.1E-49 387.7 14.4 201 575-783 24-230 (304)
10 3hyh_A Carbon catabolite-derep 100.0 6.1E-44 2.1E-48 374.9 19.8 199 575-783 13-216 (275)
11 3fpq_A Serine/threonine-protei 100.0 4.7E-44 1.6E-48 379.0 18.0 196 578-782 29-232 (290)
12 4g3f_A NF-kappa-beta-inducing 100.0 4.2E-44 1.4E-48 385.8 17.1 197 575-783 58-260 (336)
13 3hmm_A TGF-beta receptor type- 100.0 2.1E-43 7.3E-48 378.7 14.5 198 575-781 3-220 (303)
14 4ase_A Vascular endothelial gr 100.0 1.9E-43 6.5E-48 385.2 14.3 215 566-783 55-292 (353)
15 4g31_A Eukaryotic translation 100.0 7.6E-42 2.6E-46 365.1 15.7 200 575-781 5-229 (299)
16 4b99_A Mitogen-activated prote 100.0 1.2E-40 4.1E-45 369.4 17.5 205 574-786 53-270 (398)
17 3v5w_A G-protein coupled recep 100.0 2.2E-40 7.5E-45 382.5 19.4 223 574-808 188-418 (689)
18 4f9c_A Cell division cycle 7-r 100.0 1.3E-39 4.4E-44 357.2 19.5 198 572-781 18-249 (361)
19 3uto_A Twitchin; kinase, muscl 100.0 2.6E-39 8.8E-44 376.0 16.7 202 574-783 156-360 (573)
20 3uim_A Brassinosteroid insensi 100.0 9.9E-39 3.4E-43 346.7 18.5 243 563-805 18-263 (326)
21 4aw2_A Serine/threonine-protei 100.0 8.1E-39 2.8E-43 360.2 16.6 212 566-783 65-285 (437)
22 2qkw_B Protein kinase; three-h 100.0 1.9E-38 6.7E-43 343.8 18.8 229 569-800 33-262 (321)
23 3v8s_A RHO-associated protein 100.0 1.4E-37 4.8E-42 347.4 17.4 209 567-783 61-277 (410)
24 3fxz_A Serine/threonine-protei 100.0 9.2E-37 3.2E-41 327.0 22.4 201 574-783 19-220 (297)
25 2vd5_A DMPK protein; serine/th 100.0 2.2E-37 7.4E-42 346.1 16.3 212 566-783 52-274 (412)
26 2c30_A Serine/threonine-protei 100.0 1.5E-36 5E-41 329.2 21.7 216 558-782 18-244 (321)
27 3zgw_A Maternal embryonic leuc 100.0 6.7E-37 2.3E-41 334.8 18.8 203 573-782 8-213 (347)
28 3fe3_A MAP/microtubule affinit 100.0 1.1E-36 3.8E-41 330.9 19.0 201 574-783 14-218 (328)
29 1o6l_A RAC-beta serine/threoni 100.0 1.2E-36 4E-41 331.8 18.5 202 574-783 4-209 (337)
30 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.3E-37 2.8E-41 335.1 16.1 203 573-783 21-228 (353)
31 4dc2_A Protein kinase C IOTA t 100.0 3.1E-36 1.1E-40 334.8 19.9 200 574-781 51-255 (396)
32 3s95_A LIMK-1, LIM domain kina 100.0 4.3E-36 1.5E-40 323.6 19.9 202 574-781 9-224 (310)
33 1fot_A TPK1 delta, CAMP-depend 100.0 3.3E-36 1.1E-40 325.6 18.9 199 574-783 5-207 (318)
34 1xjd_A Protein kinase C, theta 100.0 3.2E-36 1.1E-40 329.3 18.6 205 571-783 13-222 (345)
35 4eqm_A Protein kinase; transfe 100.0 3.4E-36 1.2E-40 322.0 17.4 203 574-783 10-216 (294)
36 4fr4_A YANK1, serine/threonine 100.0 7.4E-36 2.5E-40 330.5 19.8 201 575-784 15-222 (384)
37 3niz_A Rhodanese family protei 100.0 1.2E-35 4E-40 320.6 20.1 204 574-785 20-226 (311)
38 2i0e_A Protein kinase C-beta I 100.0 6.2E-36 2.1E-40 328.0 17.5 203 573-783 18-225 (353)
39 2yab_A Death-associated protei 100.0 1.6E-35 5.5E-40 325.8 20.7 202 573-783 10-222 (361)
40 3a8x_A Protein kinase C IOTA t 100.0 1.1E-35 3.7E-40 325.4 19.2 199 575-781 9-212 (345)
41 3p86_A Serine/threonine-protei 100.0 5.8E-36 2E-40 322.6 16.6 209 571-783 33-243 (309)
42 3a62_A Ribosomal protein S6 ki 100.0 1.2E-35 4.3E-40 322.7 18.7 202 574-783 16-225 (327)
43 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-35 4.1E-40 325.6 18.7 199 574-783 40-242 (350)
44 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.8E-36 1.3E-40 331.9 14.3 203 573-781 63-287 (365)
45 3tki_A Serine/threonine-protei 100.0 1.7E-35 5.9E-40 321.0 19.0 203 574-783 6-212 (323)
46 2psq_A Fibroblast growth facto 100.0 1.2E-35 4.2E-40 328.3 18.1 207 574-783 80-310 (370)
47 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.4E-35 8.3E-40 339.1 21.2 206 574-783 184-393 (543)
48 4hcu_A Tyrosine-protein kinase 100.0 9.2E-36 3.2E-40 314.1 15.7 203 574-783 9-212 (269)
49 1tki_A Titin; serine kinase, m 100.0 1.1E-35 3.8E-40 322.2 16.6 201 574-783 4-207 (321)
50 2pmi_A Negative RE, cyclin-dep 100.0 3.7E-35 1.3E-39 317.5 20.4 206 574-784 4-214 (317)
51 3sxs_A Cytoplasmic tyrosine-pr 100.0 1E-35 3.5E-40 313.4 15.4 203 574-783 7-210 (268)
52 2bdw_A Hypothetical protein K1 100.0 3.3E-35 1.1E-39 323.8 20.0 201 573-782 27-233 (362)
53 2y0a_A Death-associated protei 100.0 4.2E-35 1.4E-39 318.4 20.3 201 574-783 10-221 (326)
54 2izr_A Casein kinase I isoform 100.0 4.3E-35 1.5E-39 318.8 20.2 202 574-784 8-222 (330)
55 3c0i_A Peripheral plasma membr 100.0 1.4E-35 4.7E-40 325.6 16.2 205 574-782 23-236 (351)
56 1ob3_A PFPK5, cell division co 100.0 2.2E-35 7.4E-40 314.7 17.1 201 575-783 2-205 (288)
57 2r5t_A Serine/threonine-protei 100.0 1.7E-35 5.9E-40 326.8 16.7 202 574-783 37-243 (373)
58 1kob_A Twitchin; kinase, intra 100.0 3.6E-35 1.2E-39 325.9 18.7 201 574-782 50-253 (387)
59 2zv2_A Calcium/calmodulin-depe 100.0 1.1E-34 3.7E-39 310.8 21.8 200 574-782 12-243 (298)
60 2nru_A Interleukin-1 receptor- 100.0 9.8E-35 3.3E-39 312.3 21.3 216 562-783 12-238 (307)
61 4ejn_A RAC-alpha serine/threon 100.0 1.2E-35 3.9E-40 337.1 14.7 202 574-783 147-353 (446)
62 3kul_A Ephrin type-A receptor 100.0 1.3E-35 4.6E-40 322.2 14.6 203 574-782 48-258 (325)
63 2acx_A G protein-coupled recep 100.0 5.7E-35 1.9E-39 336.9 20.1 203 574-783 183-389 (576)
64 3o0g_A Cell division protein k 100.0 9.2E-35 3.2E-39 310.4 20.3 199 575-781 2-204 (292)
65 3soa_A Calcium/calmodulin-depe 100.0 6.2E-35 2.1E-39 329.6 20.0 202 573-782 9-216 (444)
66 3g33_A Cell division protein k 100.0 1.3E-34 4.3E-39 311.8 21.3 204 573-784 7-224 (308)
67 2x4f_A Myosin light chain kina 100.0 2.5E-35 8.7E-40 326.0 16.3 196 580-783 94-292 (373)
68 2qol_A Ephrin receptor; recept 100.0 2.1E-35 7.2E-40 326.7 15.4 203 574-782 44-254 (373)
69 3gen_A Tyrosine-protein kinase 100.0 1.9E-35 6.3E-40 314.1 14.3 203 574-783 23-226 (283)
70 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.3E-35 1.1E-39 320.0 16.4 199 574-782 8-211 (336)
71 3soc_A Activin receptor type-2 100.0 1.6E-35 5.4E-40 321.2 13.5 203 574-783 23-242 (322)
72 4euu_A Serine/threonine-protei 100.0 1E-34 3.5E-39 314.2 19.8 203 574-782 8-226 (319)
73 3vhe_A Vascular endothelial gr 100.0 2.8E-35 9.5E-40 323.9 14.8 216 565-783 12-300 (359)
74 3qd2_B Eukaryotic translation 100.0 9.6E-35 3.3E-39 315.5 18.8 203 574-780 5-277 (332)
75 3mtl_A Cell division protein k 100.0 4.2E-35 1.4E-39 318.1 15.7 204 575-786 2-208 (324)
76 3cbl_A C-FES, proto-oncogene t 100.0 1.6E-35 5.4E-40 328.4 12.3 204 574-783 113-320 (377)
77 1qcf_A Haematopoetic cell kina 100.0 2.2E-35 7.5E-40 335.4 13.3 204 573-783 186-390 (454)
78 3ugc_A Tyrosine-protein kinase 100.0 5.3E-35 1.8E-39 312.6 14.9 202 574-781 9-219 (295)
79 3q4u_A Activin receptor type-1 100.0 1.9E-34 6.4E-39 309.0 19.2 196 574-781 7-235 (301)
80 3oz6_A Mitogen-activated prote 100.0 9.8E-35 3.3E-39 323.4 17.6 204 572-784 6-236 (388)
81 3ork_A Serine/threonine protei 100.0 2.1E-35 7.2E-40 318.5 11.8 203 574-783 11-223 (311)
82 1csn_A Casein kinase-1; phosph 100.0 2.5E-34 8.5E-39 307.5 20.1 201 574-783 9-222 (298)
83 1opk_A P150, C-ABL, proto-onco 100.0 6.5E-35 2.2E-39 334.9 16.3 204 574-783 219-424 (495)
84 3pfq_A PKC-B, PKC-beta, protei 100.0 1.4E-34 4.8E-39 343.3 19.6 203 573-783 339-546 (674)
85 2w4o_A Calcium/calmodulin-depe 100.0 8.6E-35 3E-39 319.0 16.5 199 573-782 51-253 (349)
86 2y94_A 5'-AMP-activated protei 100.0 2.7E-34 9.1E-39 326.6 20.9 200 574-782 15-219 (476)
87 3uc3_A Serine/threonine-protei 100.0 2.5E-34 8.6E-39 316.7 20.0 200 574-783 19-222 (361)
88 1vzo_A Ribosomal protein S6 ki 100.0 9E-35 3.1E-39 319.6 16.1 203 574-783 53-266 (355)
89 3dtc_A Mitogen-activated prote 100.0 1.9E-34 6.6E-39 304.1 17.8 200 574-782 6-217 (271)
90 2eue_A Carbon catabolite derep 100.0 3.3E-34 1.1E-38 303.2 19.6 199 575-783 13-216 (275)
91 3l9p_A Anaplastic lymphoma kin 100.0 2.5E-35 8.5E-40 325.6 11.4 207 574-783 70-291 (367)
92 3kn6_A Ribosomal protein S6 ki 100.0 2.6E-34 8.8E-39 312.0 19.2 193 580-783 16-213 (325)
93 1luf_A Muscle-specific tyrosin 100.0 5.7E-35 2E-39 319.2 14.1 209 572-783 44-281 (343)
94 3hko_A Calcium/calmodulin-depe 100.0 1.1E-34 3.8E-39 317.3 16.4 211 570-783 21-280 (345)
95 3mi9_A Cell division protein k 100.0 4.8E-34 1.6E-38 313.3 21.2 208 574-788 16-238 (351)
96 1mp8_A Focal adhesion kinase 1 100.0 6.9E-35 2.4E-39 309.6 14.0 203 574-783 14-222 (281)
97 3f3z_A Calcium/calmodulin-depe 100.0 2.4E-34 8.3E-39 304.5 18.1 201 573-783 7-211 (277)
98 2id5_A Lingo-1, leucine rich r 100.0 3.3E-34 1.1E-38 328.0 20.5 303 1-324 36-342 (477)
99 3poz_A Epidermal growth factor 100.0 9.5E-35 3.3E-39 315.7 14.8 203 574-783 14-224 (327)
100 3tt0_A Basic fibroblast growth 100.0 1.5E-34 5E-39 321.3 16.6 207 574-783 68-298 (382)
101 3gni_B Strad alpha; kinase fol 100.0 2.6E-34 9E-39 320.0 18.6 206 573-783 23-241 (389)
102 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-34 4.2E-39 312.3 15.4 208 574-784 22-258 (314)
103 3kex_A Receptor tyrosine-prote 100.0 1.1E-34 3.9E-39 314.8 15.2 202 575-783 13-222 (325)
104 3is5_A Calcium-dependent prote 100.0 1.4E-34 4.9E-39 307.9 15.6 204 574-783 21-229 (285)
105 3cok_A Serine/threonine-protei 100.0 2.2E-34 7.7E-39 304.9 17.0 203 574-783 10-216 (278)
106 3dls_A PAS domain-containing s 100.0 1.9E-34 6.4E-39 314.5 16.8 200 573-781 22-232 (335)
107 3fdn_A Serine/threonine-protei 100.0 2.3E-34 7.8E-39 305.1 16.8 201 573-783 7-211 (279)
108 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 8.9E-35 3.1E-39 330.1 14.5 204 573-783 182-386 (452)
109 3lb7_A RAF proto-oncogene seri 100.0 4E-34 1.4E-38 307.9 18.8 201 574-783 35-241 (307)
110 3t9t_A Tyrosine-protein kinase 100.0 1E-34 3.4E-39 305.4 13.8 202 574-782 7-209 (267)
111 4agu_A Cyclin-dependent kinase 100.0 4.7E-34 1.6E-38 307.6 19.2 203 575-785 3-209 (311)
112 3llt_A Serine/threonine kinase 100.0 1.1E-34 3.9E-39 319.3 14.6 210 564-784 24-264 (360)
113 2a2a_A Death-associated protei 100.0 3.9E-34 1.3E-38 310.0 18.6 201 574-783 11-222 (321)
114 3op5_A Serine/threonine-protei 100.0 1.9E-34 6.4E-39 318.2 16.0 202 573-781 33-263 (364)
115 1k9a_A Carboxyl-terminal SRC k 100.0 4.5E-34 1.5E-38 324.2 19.5 198 574-783 192-391 (450)
116 3p1a_A MYT1 kinase, membrane-a 100.0 2.9E-34 9.8E-39 309.7 17.0 198 574-781 56-257 (311)
117 3kk8_A Calcium/calmodulin depe 100.0 7.9E-34 2.7E-38 301.6 20.0 200 574-782 5-210 (284)
118 3dbq_A Dual specificity protei 100.0 3.5E-34 1.2E-38 313.4 17.7 199 574-781 8-222 (343)
119 1rjb_A FL cytokine receptor; k 100.0 2.8E-34 9.7E-39 314.0 16.8 208 573-783 43-279 (344)
120 3kfa_A Tyrosine-protein kinase 100.0 1.8E-34 6.2E-39 307.1 14.8 205 573-783 11-217 (288)
121 2qr7_A Ribosomal protein S6 ki 100.0 3.1E-34 1.1E-38 313.4 16.9 198 573-782 20-223 (342)
122 3ttj_A Mitogen-activated prote 100.0 2.1E-34 7.1E-39 327.7 15.9 199 574-784 61-268 (464)
123 2ac3_A MAP kinase-interacting 100.0 3.8E-34 1.3E-38 309.0 17.0 203 574-783 11-230 (316)
124 2vgo_A Serine/threonine-protei 100.0 6.2E-34 2.1E-38 302.6 18.3 200 574-783 13-216 (284)
125 1u5q_A Serine/threonine protei 100.0 2.9E-34 9.9E-39 314.5 16.1 196 575-782 54-256 (348)
126 3lm5_A Serine/threonine-protei 100.0 4.2E-34 1.4E-38 310.6 17.2 219 558-783 11-237 (327)
127 1ua2_A CAK, cell division prot 100.0 4.4E-34 1.5E-38 313.0 17.5 204 572-783 7-217 (346)
128 4f0f_A Serine/threonine-protei 100.0 8.5E-34 2.9E-38 301.9 19.1 198 574-783 18-232 (287)
129 1qpc_A LCK kinase; alpha beta 100.0 4E-34 1.4E-38 303.2 16.4 203 574-783 12-215 (279)
130 3rgz_A Protein brassinosteroid 100.0 5.2E-34 1.8E-38 345.2 19.6 276 1-276 372-723 (768)
131 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.2E-34 1.1E-38 311.8 16.0 203 573-784 32-243 (329)
132 3rgz_A Protein brassinosteroid 100.0 6.3E-34 2.2E-38 344.5 20.3 316 1-317 347-742 (768)
133 1nxk_A MAP kinase-activated pr 100.0 8.9E-34 3.1E-38 316.6 19.7 197 575-783 61-267 (400)
134 2zmd_A Dual specificity protei 100.0 5.8E-34 2E-38 317.2 17.9 198 575-781 56-269 (390)
135 3qup_A Tyrosine-protein kinase 100.0 3.6E-34 1.2E-38 310.3 15.8 208 573-783 21-244 (323)
136 2yex_A Serine/threonine-protei 100.0 1.1E-33 3.9E-38 298.9 19.2 204 573-783 5-212 (276)
137 3i6u_A CDS1, serine/threonine- 100.0 6.1E-34 2.1E-38 320.0 17.9 201 572-782 132-347 (419)
138 2rku_A Serine/threonine-protei 100.0 1.1E-33 3.8E-38 302.2 19.0 202 574-783 14-219 (294)
139 3bhy_A Death-associated protei 100.0 1.1E-33 3.6E-38 300.4 18.6 200 575-783 5-215 (283)
140 2h34_A Serine/threonine-protei 100.0 5.3E-34 1.8E-38 307.3 16.5 202 574-782 33-238 (309)
141 3eb0_A Putative uncharacterize 100.0 6E-34 2.1E-38 316.4 17.1 204 571-784 3-247 (383)
142 4e5w_A Tyrosine-protein kinase 100.0 8.4E-34 2.9E-38 304.2 17.6 200 575-780 21-230 (302)
143 4fvq_A Tyrosine-protein kinase 100.0 2.1E-34 7.3E-39 306.8 12.7 195 574-779 7-218 (289)
144 2owb_A Serine/threonine-protei 100.0 1.1E-33 3.6E-38 308.5 18.5 202 574-783 40-245 (335)
145 3cc6_A Protein tyrosine kinase 100.0 4.4E-34 1.5E-38 303.3 15.0 204 573-783 10-219 (281)
146 1t46_A HOMO sapiens V-KIT hard 100.0 4E-34 1.4E-38 308.2 14.8 207 574-783 22-252 (313)
147 2pvf_A Fibroblast growth facto 100.0 7.1E-34 2.4E-38 309.7 16.9 207 574-783 34-264 (334)
148 3a7i_A MST3 kinase, serine/thr 100.0 1.7E-33 5.8E-38 302.1 19.3 200 574-782 21-222 (303)
149 3rp9_A Mitogen-activated prote 100.0 6.5E-34 2.2E-38 323.9 16.4 193 574-774 52-279 (458)
150 2h8h_A Proto-oncogene tyrosine 100.0 2.2E-34 7.5E-39 333.6 12.5 203 573-782 265-468 (535)
151 3kmu_A ILK, integrin-linked ki 100.0 8.2E-34 2.8E-38 298.8 15.8 199 574-782 9-214 (271)
152 1u59_A Tyrosine-protein kinase 100.0 1.5E-33 5.1E-38 300.2 17.9 202 575-783 9-218 (287)
153 4eut_A Serine/threonine-protei 100.0 6E-34 2.1E-38 317.8 15.3 203 574-782 8-226 (396)
154 1cm8_A Phosphorylated MAP kina 100.0 5.8E-34 2E-38 314.5 15.0 198 574-784 24-231 (367)
155 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-33 4.5E-38 301.0 17.1 201 573-782 22-228 (289)
156 2y7j_A Phosphorylase B kinase 100.0 2.3E-33 7.8E-38 309.6 19.6 207 567-782 86-308 (365)
157 4hgt_A Casein kinase I isoform 100.0 3.2E-33 1.1E-37 298.4 20.1 202 573-783 7-219 (296)
158 3pg1_A Mitogen-activated prote 100.0 1E-33 3.6E-38 311.9 16.8 209 566-783 13-238 (362)
159 2jam_A Calcium/calmodulin-depe 100.0 8.8E-34 3E-38 304.6 15.7 200 573-782 7-210 (304)
160 3nyv_A Calmodulin-domain prote 100.0 1.1E-33 3.9E-38 324.2 17.7 200 574-783 25-231 (484)
161 3mwu_A Calmodulin-domain prote 100.0 1.8E-33 6E-38 322.7 19.2 201 573-783 20-226 (486)
162 2v62_A Serine/threonine-protei 100.0 1E-33 3.5E-38 310.0 16.4 200 574-781 36-262 (345)
163 2w5a_A Serine/threonine-protei 100.0 3.4E-34 1.2E-38 303.5 12.2 209 574-783 5-220 (279)
164 3n9x_A Phosphotransferase; mal 100.0 1.1E-33 3.7E-38 319.4 17.1 198 574-779 25-252 (432)
165 3v47_A TOLL-like receptor 5B a 100.0 7.2E-34 2.5E-38 323.0 15.6 320 1-320 34-413 (455)
166 3lij_A Calcium/calmodulin depe 100.0 2.4E-33 8.1E-38 322.2 20.1 200 574-783 36-241 (494)
167 4aaa_A Cyclin-dependent kinase 100.0 1.3E-33 4.4E-38 307.3 16.9 202 574-783 24-229 (331)
168 2ozo_A Tyrosine-protein kinase 100.0 1.2E-33 4.1E-38 332.2 17.8 195 582-783 343-544 (613)
169 2clq_A Mitogen-activated prote 100.0 5.8E-33 2E-37 296.4 21.5 201 576-781 23-227 (295)
170 2wqm_A Serine/threonine-protei 100.0 1.4E-33 4.7E-38 303.9 16.6 204 575-782 32-239 (310)
171 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-33 4.3E-38 300.0 16.0 200 573-780 9-232 (289)
172 3lxl_A Tyrosine-protein kinase 100.0 6.9E-34 2.4E-38 308.8 14.1 202 574-781 22-232 (327)
173 3lxp_A Non-receptor tyrosine-p 100.0 1.8E-33 6.2E-38 304.4 17.3 197 577-781 33-239 (318)
174 2r3i_A Cell division protein k 100.0 2.5E-33 8.6E-38 300.0 18.2 202 575-783 3-208 (299)
175 3uzp_A CKI-delta, CKID, casein 100.0 4.6E-33 1.6E-37 297.4 20.1 201 574-783 8-219 (296)
176 2eva_A TAK1 kinase - TAB1 chim 100.0 2.1E-33 7E-38 302.4 17.1 198 575-782 8-206 (307)
177 2pml_X PFPK7, Ser/Thr protein 100.0 2.6E-33 9E-38 306.8 18.3 203 574-783 30-256 (348)
178 2a19_B Interferon-induced, dou 100.0 2.5E-33 8.6E-38 297.4 17.4 197 573-780 9-222 (284)
179 3byv_A Rhoptry kinase; malaria 100.0 1.1E-34 3.6E-39 321.8 7.0 200 574-782 72-316 (377)
180 1p4o_A Insulin-like growth fac 100.0 2.9E-34 9.9E-39 310.8 10.2 211 569-782 19-244 (322)
181 2xir_A Vascular endothelial gr 100.0 6E-34 2.1E-38 307.2 12.7 216 565-783 17-255 (316)
182 3eqc_A Dual specificity mitoge 100.0 6.3E-34 2.1E-38 313.4 13.1 201 574-783 32-234 (360)
183 1j1b_A Glycogen synthase kinas 100.0 1.3E-33 4.5E-38 317.4 15.9 200 575-784 54-262 (420)
184 1fvr_A Tyrosine-protein kinase 100.0 2.1E-33 7.1E-38 305.1 16.7 203 575-782 25-245 (327)
185 3lzb_A Epidermal growth factor 100.0 1.4E-33 4.7E-38 306.6 15.3 203 574-783 14-224 (327)
186 1t4h_A Serine/threonine-protei 100.0 3.5E-33 1.2E-37 297.7 18.1 198 575-781 26-231 (290)
187 3mdy_A Bone morphogenetic prot 100.0 6.3E-33 2.2E-37 302.1 20.1 208 565-781 27-264 (337)
188 1mqb_A Ephrin type-A receptor 100.0 2E-33 6.9E-38 306.1 16.1 202 575-782 44-254 (333)
189 2fst_X Mitogen-activated prote 100.0 1E-33 3.5E-38 312.5 13.8 198 574-784 28-235 (367)
190 2buj_A Serine/threonine-protei 100.0 7.1E-34 2.4E-38 307.1 12.3 205 574-781 28-248 (317)
191 3c1x_A Hepatocyte growth facto 100.0 7.3E-34 2.5E-38 314.2 12.6 201 576-782 90-300 (373)
192 3q5i_A Protein kinase; CDPK, m 100.0 4E-33 1.4E-37 321.1 19.3 201 573-783 34-251 (504)
193 2j7t_A Serine/threonine-protei 100.0 1.6E-33 5.5E-38 302.0 14.7 203 573-782 17-225 (302)
194 2xrw_A Mitogen-activated prote 100.0 2.2E-33 7.5E-38 310.5 16.2 198 574-783 24-230 (371)
195 3com_A Serine/threonine-protei 100.0 8.1E-33 2.8E-37 298.3 20.3 201 573-782 27-228 (314)
196 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-33 4E-38 305.1 13.6 256 21-278 50-312 (313)
197 3brb_A Proto-oncogene tyrosine 100.0 3.9E-33 1.3E-37 300.8 17.4 209 572-783 31-254 (313)
198 3qyz_A Mitogen-activated prote 100.0 3.1E-33 1.1E-37 308.5 16.8 202 574-784 26-237 (364)
199 1phk_A Phosphorylase kinase; g 100.0 9.6E-33 3.3E-37 295.3 19.9 202 573-783 15-233 (298)
200 1blx_A Cyclin-dependent kinase 100.0 5.4E-33 1.8E-37 301.3 18.1 203 573-783 9-223 (326)
201 2ycf_A Serine/threonine-protei 100.0 4.8E-33 1.6E-37 301.5 17.7 200 573-782 8-222 (322)
202 4e7w_A Glycogen synthase kinas 100.0 3.2E-33 1.1E-37 311.6 16.6 201 574-784 39-247 (394)
203 4fl3_A Tyrosine-protein kinase 100.0 2.5E-33 8.5E-38 330.4 16.4 195 581-783 375-577 (635)
204 2h6d_A 5'-AMP-activated protei 100.0 3E-33 1E-37 295.8 15.4 200 574-782 10-214 (276)
205 2i6l_A Mitogen-activated prote 100.0 4.3E-33 1.5E-37 300.8 17.0 201 574-783 10-229 (320)
206 2z7x_B TOLL-like receptor 1, v 100.0 3.3E-33 1.1E-37 323.3 17.2 334 2-342 26-512 (520)
207 2jii_A Serine/threonine-protei 100.0 1.6E-33 5.3E-38 309.4 13.5 198 574-782 41-271 (352)
208 1b6c_B TGF-B superfamily recep 100.0 9.8E-33 3.3E-37 301.4 19.6 207 564-782 31-270 (342)
209 2i1m_A Macrophage colony-stimu 100.0 1E-33 3.4E-38 308.2 11.7 207 573-782 44-270 (333)
210 3kvw_A DYRK2, dual specificity 100.0 4.7E-33 1.6E-37 313.7 17.4 200 574-784 96-304 (429)
211 3fme_A Dual specificity mitoge 100.0 2.1E-33 7.1E-38 299.2 13.7 203 574-781 6-215 (290)
212 1xbb_A Tyrosine-protein kinase 100.0 4.4E-33 1.5E-37 297.2 16.2 202 574-783 15-225 (291)
213 2w1i_A JAK2; chromosomal rearr 100.0 2.1E-33 7.3E-38 304.9 13.8 202 574-781 40-250 (326)
214 3e3p_A Protein kinase, putativ 100.0 5.7E-33 2E-37 305.6 17.3 210 568-784 16-237 (360)
215 2vwi_A Serine/threonine-protei 100.0 1.8E-33 6.2E-38 301.4 12.7 209 572-783 12-231 (303)
216 3sv0_A Casein kinase I-like; t 100.0 1.4E-32 4.7E-37 313.1 20.4 202 574-784 6-218 (483)
217 3f66_A Hepatocyte growth facto 100.0 2.6E-33 9E-38 299.8 13.4 203 574-782 24-236 (298)
218 3nsz_A CK II alpha, casein kin 100.0 1.1E-32 3.9E-37 299.4 18.5 193 574-781 35-233 (330)
219 3pls_A Macrophage-stimulating 100.0 4.6E-33 1.6E-37 297.7 15.1 198 576-779 22-228 (298)
220 2yfx_A Tyrosine-protein kinase 100.0 3.3E-33 1.1E-37 303.4 14.1 206 574-782 29-249 (327)
221 3rgf_A Cyclin-dependent kinase 100.0 7E-33 2.4E-37 310.2 17.2 203 575-783 20-240 (405)
222 3an0_A Dual specificity mitoge 100.0 2.5E-33 8.4E-38 306.1 13.1 204 573-781 49-259 (340)
223 3q60_A ROP5B; pseudokinase, tr 100.0 1.6E-33 5.3E-38 311.7 11.2 198 574-782 61-296 (371)
224 3gxj_A TGF-beta receptor type- 100.0 1.3E-34 4.4E-39 310.4 1.9 196 574-781 2-230 (303)
225 2b9h_A MAP kinase FUS3, mitoge 100.0 7.2E-33 2.5E-37 303.9 15.6 201 574-783 10-227 (353)
226 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.2E-32 7.6E-37 319.5 20.5 316 1-323 56-518 (562)
227 2wtk_C Serine/threonine-protei 100.0 2E-32 7E-37 293.8 18.4 204 574-783 4-217 (305)
228 1z57_A Dual specificity protei 100.0 1.4E-32 4.7E-37 299.2 17.1 200 574-784 13-239 (339)
229 1byg_A CSK, protein (C-termina 100.0 3.9E-33 1.3E-37 295.4 12.5 198 574-783 20-219 (278)
230 1u46_A ACK-1, activated CDC42 100.0 6.9E-33 2.4E-37 295.3 14.3 202 574-782 17-228 (291)
231 3ll6_A Cyclin G-associated kin 100.0 3.3E-33 1.1E-37 304.0 12.0 205 574-781 27-255 (337)
232 1wak_A Serine/threonine-protei 100.0 1E-32 3.5E-37 307.4 16.1 200 574-783 36-297 (397)
233 2x7f_A TRAF2 and NCK-interacti 100.0 1.4E-32 4.9E-37 298.0 16.7 204 572-782 21-237 (326)
234 3g2f_A Bone morphogenetic prot 100.0 9.1E-33 3.1E-37 300.9 15.1 199 574-781 12-237 (336)
235 2wei_A Calmodulin-domain prote 100.0 3.4E-32 1.2E-36 289.7 18.4 202 572-783 19-226 (287)
236 1ziw_A TOLL-like receptor 3; i 100.0 1.5E-31 5E-36 319.8 25.9 342 2-343 253-657 (680)
237 4exu_A Mitogen-activated prote 100.0 1.1E-32 3.9E-37 304.8 15.0 196 574-783 41-246 (371)
238 3t6q_A CD180 antigen; protein- 100.0 4.9E-32 1.7E-36 319.5 21.1 300 1-323 258-568 (606)
239 2j0j_A Focal adhesion kinase 1 100.0 1.1E-32 3.6E-37 326.2 15.3 204 573-783 388-597 (656)
240 2vx3_A Dual specificity tyrosi 100.0 1.1E-32 3.9E-37 306.0 14.3 205 571-784 50-263 (382)
241 3vq2_A TLR4, TOLL-like recepto 100.0 3.1E-32 1.1E-36 321.1 18.5 208 135-343 372-591 (606)
242 3cek_A Dual specificity protei 100.0 1E-32 3.4E-37 297.7 12.6 202 571-781 24-241 (313)
243 3coi_A Mitogen-activated prote 100.0 2.2E-32 7.7E-37 300.2 15.0 196 574-783 23-228 (353)
244 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.7E-32 5.7E-37 296.5 13.4 202 573-783 31-247 (319)
245 3a99_A Proto-oncogene serine/t 100.0 2E-32 6.8E-37 296.5 13.9 201 571-781 39-251 (320)
246 3v47_A TOLL-like receptor 5B a 100.0 6.1E-32 2.1E-36 307.1 18.4 274 1-274 58-412 (455)
247 2rio_A Serine/threonine-protei 100.0 3.7E-32 1.3E-36 307.0 15.7 201 575-782 15-243 (434)
248 2iwi_A Serine/threonine-protei 100.0 1.9E-32 6.6E-37 295.2 12.8 201 571-781 27-241 (312)
249 2eu9_A Dual specificity protei 100.0 6E-32 2E-36 296.3 16.5 200 574-784 18-244 (355)
250 1zy4_A Serine/threonine-protei 100.0 4.5E-32 1.5E-36 290.2 14.6 195 573-774 4-226 (303)
251 4eco_A Uncharacterized protein 100.0 6.7E-32 2.3E-36 319.5 16.3 285 2-290 254-575 (636)
252 4g8a_A TOLL-like receptor 4; l 100.0 2.9E-31 9.9E-36 313.8 20.6 136 1-136 56-194 (635)
253 3fhr_A MAP kinase-activated pr 100.0 1E-31 3.5E-36 293.0 15.4 197 573-782 26-232 (336)
254 3p23_A Serine/threonine-protei 100.0 9.1E-32 3.1E-36 303.1 15.1 198 574-781 23-232 (432)
255 3aln_A Dual specificity mitoge 100.0 1.1E-31 3.6E-36 291.5 15.0 203 574-781 21-231 (327)
256 2id5_A Lingo-1, leucine rich r 100.0 3E-31 1E-35 303.4 19.4 272 1-272 60-335 (477)
257 1q8y_A SR protein kinase; tran 100.0 1E-31 3.4E-36 297.0 14.7 200 574-783 18-239 (373)
258 3j0a_A TOLL-like receptor 5; m 100.0 2.7E-31 9.2E-36 324.7 20.0 230 93-324 268-569 (844)
259 2pzi_A Probable serine/threoni 100.0 8.8E-32 3E-36 321.1 15.0 192 574-781 79-278 (681)
260 4eco_A Uncharacterized protein 100.0 5.4E-31 1.8E-35 311.8 20.7 282 1-288 210-543 (636)
261 2vuw_A Serine/threonine-protei 100.0 1.1E-31 3.6E-36 292.8 12.4 191 574-780 19-278 (336)
262 2dyl_A Dual specificity mitoge 100.0 2.7E-31 9.4E-36 286.6 14.4 200 574-781 24-231 (318)
263 3qa8_A MGC80376 protein; kinas 100.0 1.2E-31 4.1E-36 312.2 11.7 202 574-781 13-225 (676)
264 4ecn_A Leucine-rich repeat pro 100.0 8.3E-31 2.9E-35 316.3 17.1 266 1-271 327-687 (876)
265 1ogq_A PGIP-2, polygalacturona 100.0 1.1E-30 3.9E-35 281.7 16.0 231 45-276 51-287 (313)
266 3o6n_A APL1; leucine-rich repe 100.0 1.9E-30 6.5E-35 288.9 18.2 292 2-325 50-362 (390)
267 2z81_A CD282 antigen, TOLL-lik 100.0 3E-30 1E-34 300.4 19.6 318 1-320 30-515 (549)
268 2z63_A TOLL-like receptor 4, v 100.0 1.6E-30 5.3E-35 304.1 16.7 338 2-341 33-561 (570)
269 3uqc_A Probable conserved tran 100.0 3.3E-30 1.1E-34 274.3 16.9 173 574-783 30-206 (286)
270 1xku_A Decorin; proteoglycan, 100.0 1.8E-29 6E-34 274.5 22.4 261 2-271 36-307 (330)
271 3oja_B Anopheles plasmodium-re 100.0 4.4E-30 1.5E-34 302.0 18.6 291 2-324 56-367 (597)
272 3t6q_A CD180 antigen; protein- 100.0 5.6E-30 1.9E-34 301.9 19.5 270 1-272 282-562 (606)
273 4ecn_A Leucine-rich repeat pro 100.0 1.7E-29 5.7E-34 305.0 22.1 282 1-289 452-784 (876)
274 2ft3_A Biglycan; proteoglycan, 100.0 2.5E-29 8.4E-34 273.6 21.2 270 2-281 38-320 (332)
275 1xku_A Decorin; proteoglycan, 100.0 9E-29 3.1E-33 268.9 24.9 251 21-280 31-286 (330)
276 3dzo_A Rhoptry kinase domain; 100.0 1.6E-30 5.5E-35 291.6 10.3 200 575-783 78-321 (413)
277 2ft3_A Biglycan; proteoglycan, 100.0 6.6E-29 2.3E-33 270.2 22.1 260 11-280 17-287 (332)
278 2z66_A Variable lymphocyte rec 100.0 3E-29 1E-33 269.6 18.7 276 2-281 12-298 (306)
279 3vq2_A TLR4, TOLL-like recepto 100.0 2.2E-29 7.4E-34 296.8 18.9 135 1-135 36-173 (606)
280 3j0a_A TOLL-like receptor 5; m 100.0 7.4E-29 2.5E-33 303.1 22.7 283 1-283 28-364 (844)
281 3m2w_A MAP kinase-activated pr 100.0 3.8E-29 1.3E-33 267.9 15.4 174 575-781 17-200 (299)
282 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-28 5.2E-33 287.0 21.5 278 1-285 80-501 (562)
283 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-28 3.8E-33 285.3 18.6 280 1-286 49-473 (520)
284 1ziw_A TOLL-like receptor 3; i 100.0 2E-28 7E-33 292.5 20.0 284 2-285 30-357 (680)
285 3zyj_A Leucine-rich repeat-con 100.0 2.1E-28 7.3E-33 276.9 18.3 226 23-252 45-273 (440)
286 3o6n_A APL1; leucine-rich repe 100.0 2.4E-28 8.4E-33 271.8 18.3 261 1-272 73-354 (390)
287 3zyj_A Leucine-rich repeat-con 100.0 6.9E-28 2.4E-32 272.7 22.2 243 2-249 48-294 (440)
288 3zyi_A Leucine-rich repeat-con 100.0 5.8E-28 2E-32 274.3 21.0 246 23-272 56-305 (452)
289 3zyi_A Leucine-rich repeat-con 100.0 1.8E-28 6.3E-33 278.4 16.9 254 46-324 56-312 (452)
290 2z81_A CD282 antigen, TOLL-lik 100.0 2.5E-28 8.5E-33 284.2 18.3 287 1-289 54-505 (549)
291 1ozn_A Reticulon 4 receptor; N 100.0 4E-28 1.4E-32 258.1 18.0 254 24-279 14-270 (285)
292 3oja_B Anopheles plasmodium-re 100.0 4.1E-28 1.4E-32 285.2 18.3 262 1-272 79-360 (597)
293 4fcg_A Uncharacterized protein 100.0 1.3E-27 4.6E-32 259.4 19.0 225 20-248 80-315 (328)
294 4fcg_A Uncharacterized protein 99.9 2.4E-27 8.1E-32 257.4 19.9 224 45-272 82-316 (328)
295 1wwl_A Monocyte differentiatio 99.9 3.6E-29 1.2E-33 269.9 5.2 248 17-271 39-310 (312)
296 2z66_A Variable lymphocyte rec 99.9 6.7E-28 2.3E-32 259.0 14.3 247 23-272 9-263 (306)
297 2z80_A TOLL-like receptor 2, v 99.9 9.3E-28 3.2E-32 263.4 15.4 279 18-319 28-318 (353)
298 2z63_A TOLL-like receptor 4, v 99.9 1.1E-27 3.7E-32 280.0 16.9 285 1-286 56-523 (570)
299 2z80_A TOLL-like receptor 2, v 99.9 7.9E-28 2.7E-32 264.0 14.0 267 3-272 37-316 (353)
300 4fmz_A Internalin; leucine ric 99.9 1.5E-26 5E-31 253.1 23.4 254 2-273 49-303 (347)
301 4fmz_A Internalin; leucine ric 99.9 1.5E-26 5.3E-31 252.9 23.0 257 1-274 70-328 (347)
302 1ozn_A Reticulon 4 receptor; N 99.9 6.7E-27 2.3E-31 248.6 18.7 224 47-272 14-240 (285)
303 4g8a_A TOLL-like receptor 4; l 99.9 5E-27 1.7E-31 277.5 19.1 113 1-113 80-195 (635)
304 1o6v_A Internalin A; bacterial 99.9 3.3E-26 1.1E-30 260.9 24.6 253 2-272 73-346 (466)
305 4azs_A Methyltransferase WBDD; 99.9 1.7E-28 5.8E-33 285.1 5.0 185 583-779 242-438 (569)
306 1o6v_A Internalin A; bacterial 99.9 6.7E-26 2.3E-30 258.3 22.2 256 1-274 94-370 (466)
307 3bz5_A Internalin-J, INLJ; leu 99.9 7.9E-26 2.7E-30 256.5 21.8 247 2-273 47-302 (457)
308 2z62_A TOLL-like receptor 4, v 99.9 6.2E-26 2.1E-30 240.0 18.2 221 50-272 13-239 (276)
309 3o53_A Protein LRIM1, AGAP0063 99.9 1.2E-27 3.9E-32 258.7 4.5 258 3-272 16-278 (317)
310 3oja_A Leucine-rich immune mol 99.9 9.7E-27 3.3E-31 266.2 8.6 239 15-265 28-270 (487)
311 2z62_A TOLL-like receptor 4, v 99.9 4.1E-25 1.4E-29 233.6 17.5 215 12-251 21-241 (276)
312 1wwl_A Monocyte differentiatio 99.9 5.5E-26 1.9E-30 244.9 10.6 240 1-249 47-311 (312)
313 3bz5_A Internalin-J, INLJ; leu 99.9 1.2E-24 4.1E-29 246.7 21.9 243 7-272 28-279 (457)
314 1p9a_G Platelet glycoprotein I 99.9 1.6E-24 5.4E-29 230.9 19.0 204 63-272 6-210 (290)
315 2o6q_A Variable lymphocyte rec 99.9 2.5E-24 8.6E-29 226.9 20.2 184 67-250 37-221 (270)
316 1jl5_A Outer protein YOPM; leu 99.9 3E-25 1E-29 251.5 13.0 244 1-272 15-272 (454)
317 3en9_A Glycoprotease, O-sialog 99.9 1.2E-25 4E-30 259.7 9.7 185 578-780 339-539 (540)
318 1jl5_A Outer protein YOPM; leu 99.9 3.7E-24 1.3E-28 242.5 21.0 231 21-278 131-380 (454)
319 1p9a_G Platelet glycoprotein I 99.9 3.7E-24 1.3E-28 228.0 19.2 205 17-249 6-210 (290)
320 2o6q_A Variable lymphocyte rec 99.9 6.5E-24 2.2E-28 223.7 20.4 203 67-272 16-220 (270)
321 3rfs_A Internalin B, repeat mo 99.9 1.4E-24 4.9E-29 229.1 13.8 208 63-280 37-245 (272)
322 3rfs_A Internalin B, repeat mo 99.9 3.2E-24 1.1E-28 226.4 16.3 223 22-255 20-243 (272)
323 3m19_A Variable lymphocyte rec 99.9 1.3E-23 4.6E-28 218.8 18.8 210 67-279 14-230 (251)
324 3o53_A Protein LRIM1, AGAP0063 99.9 1.6E-25 5.6E-30 241.8 4.4 237 22-271 11-251 (317)
325 3oja_A Leucine-rich immune mol 99.9 1.4E-25 4.6E-30 256.8 3.9 229 1-242 38-270 (487)
326 3g06_A SSPH2 (leucine-rich rep 99.9 3.3E-23 1.1E-27 242.3 23.5 239 1-272 44-299 (622)
327 2xwt_C Thyrotropin receptor; s 99.9 4.2E-23 1.4E-27 213.3 15.5 177 63-244 51-236 (239)
328 2xwt_C Thyrotropin receptor; s 99.9 3.6E-23 1.2E-27 213.8 14.2 211 49-267 16-236 (239)
329 4glp_A Monocyte differentiatio 99.9 1.7E-23 5.8E-28 225.2 11.1 227 42-271 62-308 (310)
330 3m19_A Variable lymphocyte rec 99.9 4.8E-23 1.6E-27 214.6 13.8 202 49-252 19-226 (251)
331 1z7x_W Ribonuclease inhibitor; 99.9 6.6E-26 2.2E-30 257.7 -9.4 270 2-271 90-412 (461)
332 3goz_A Leucine-rich repeat-con 99.9 4.6E-24 1.6E-28 234.8 2.0 253 2-272 3-299 (362)
333 1z7x_W Ribonuclease inhibitor; 99.9 1E-25 3.5E-30 256.1 -12.3 273 2-274 33-358 (461)
334 2ast_B S-phase kinase-associat 99.9 8.1E-24 2.8E-28 230.1 1.4 250 22-278 48-314 (336)
335 3g06_A SSPH2 (leucine-rich rep 99.9 4.8E-21 1.6E-25 224.0 24.7 218 22-274 41-258 (622)
336 1h6u_A Internalin H; cell adhe 99.9 8.6E-22 2.9E-26 211.6 16.3 173 63-248 59-231 (308)
337 1h6u_A Internalin H; cell adhe 99.9 5.6E-22 1.9E-26 213.1 14.5 208 4-228 26-234 (308)
338 2ca6_A RAN GTPase-activating p 99.9 4.8E-24 1.6E-28 236.8 -2.0 243 12-272 23-318 (386)
339 4glp_A Monocyte differentiatio 99.9 1.5E-21 5.1E-26 210.0 16.2 222 22-248 65-308 (310)
340 1zar_A RIO2 kinase; serine kin 99.9 3.2E-22 1.1E-26 211.9 9.5 151 569-752 84-252 (282)
341 2ast_B S-phase kinase-associat 99.9 6.7E-23 2.3E-27 222.8 2.7 248 2-256 52-315 (336)
342 4ay9_X Follicle-stimulating ho 99.8 9.9E-21 3.4E-25 207.2 16.5 239 24-267 12-256 (350)
343 2ca6_A RAN GTPase-activating p 99.8 9.5E-23 3.2E-27 226.3 -1.8 236 1-251 36-320 (386)
344 4ay9_X Follicle-stimulating ho 99.8 1.2E-20 4E-25 206.6 14.3 216 46-266 11-232 (350)
345 2o6s_A Variable lymphocyte rec 99.8 2E-20 6.9E-25 188.8 14.1 177 70-255 10-186 (208)
346 3cvr_A Invasion plasmid antige 99.8 2.3E-20 8E-25 215.6 15.3 185 68-278 60-251 (571)
347 2o6s_A Variable lymphocyte rec 99.8 2.6E-20 8.8E-25 188.0 13.3 176 49-233 12-187 (208)
348 3goz_A Leucine-rich repeat-con 99.8 5.1E-21 1.7E-25 210.5 6.1 214 59-272 14-268 (362)
349 3cvr_A Invasion plasmid antige 99.8 6.5E-20 2.2E-24 211.9 15.6 166 67-256 80-252 (571)
350 2xot_A Amphoterin-induced prot 99.8 7.7E-20 2.6E-24 201.0 12.7 145 68-212 40-188 (361)
351 1h6t_A Internalin B; cell adhe 99.8 2.5E-19 8.5E-24 190.7 14.7 186 50-249 30-215 (291)
352 2v9t_B SLIT homolog 2 protein 99.8 2.8E-19 9.6E-24 182.2 14.0 152 70-248 14-166 (220)
353 2xot_A Amphoterin-induced prot 99.8 1.5E-19 5.2E-24 198.6 12.3 157 69-228 20-180 (361)
354 1m9s_A Internalin B; cell inva 99.8 2.3E-19 7.8E-24 209.5 14.1 192 47-252 24-215 (605)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-19 4E-24 185.0 9.4 153 70-249 14-168 (220)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 3.8E-19 1.3E-23 181.2 12.9 151 119-272 15-168 (220)
357 2v9t_B SLIT homolog 2 protein 99.8 6.5E-19 2.2E-23 179.4 14.4 153 46-200 13-165 (220)
358 2jwp_A Malectin, MGC80075; sug 99.8 2.3E-19 7.9E-24 174.9 10.3 117 377-500 50-169 (174)
359 1h6t_A Internalin B; cell adhe 99.8 4E-19 1.4E-23 189.2 12.4 175 18-228 43-217 (291)
360 3e6j_A Variable lymphocyte rec 99.8 2.9E-18 1E-22 175.7 16.7 155 69-251 21-176 (229)
361 1m9s_A Internalin B; cell inva 99.8 7.1E-19 2.4E-23 205.3 13.4 193 23-230 23-216 (605)
362 4ezg_A Putative uncharacterize 99.8 1.3E-18 4.6E-23 173.9 12.1 153 64-224 41-194 (197)
363 3e6j_A Variable lymphocyte rec 99.8 3.3E-18 1.1E-22 175.4 15.1 153 46-201 21-173 (229)
364 1xeu_A Internalin C; cellular 99.8 1.6E-18 5.5E-23 181.6 10.4 171 66-250 18-188 (263)
365 1dce_A Protein (RAB geranylger 99.7 4.6E-20 1.6E-24 214.1 -2.8 181 65-252 347-551 (567)
366 1xeu_A Internalin C; cellular 99.7 2.4E-18 8.1E-23 180.3 10.5 169 46-228 21-189 (263)
367 4b8c_D Glucose-repressible alc 99.7 9.9E-19 3.4E-23 209.1 8.1 166 69-244 203-369 (727)
368 4b8c_D Glucose-repressible alc 99.7 7.8E-19 2.7E-23 210.0 5.6 191 21-221 173-369 (727)
369 1zth_A RIO1 serine protein kin 99.7 1.7E-18 5.7E-23 180.9 7.3 137 576-728 48-219 (258)
370 3ogk_B Coronatine-insensitive 99.7 2.7E-19 9.3E-24 209.8 1.2 272 1-273 196-529 (592)
371 1dce_A Protein (RAB geranylger 99.7 1.3E-19 4.4E-24 210.3 -1.8 180 88-273 346-549 (567)
372 4ezg_A Putative uncharacterize 99.7 1.5E-17 5.3E-22 166.1 12.7 146 49-201 49-195 (197)
373 1w8a_A SLIT protein; signaling 99.7 7.5E-18 2.6E-22 167.7 8.5 129 70-225 11-140 (192)
374 1w8a_A SLIT protein; signaling 99.7 7.6E-17 2.6E-21 160.4 11.8 140 140-279 30-171 (192)
375 3ogk_B Coronatine-insensitive 99.7 1.5E-18 5.1E-23 203.4 -3.3 224 46-271 222-477 (592)
376 2ell_A Acidic leucine-rich nuc 99.7 1.9E-16 6.4E-21 153.8 11.5 135 92-228 25-164 (168)
377 3sb4_A Hypothetical leucine ri 99.6 3.2E-16 1.1E-20 169.8 10.0 227 20-255 48-318 (329)
378 2ell_A Acidic leucine-rich nuc 99.6 4.5E-16 1.5E-20 151.1 10.0 135 66-202 23-162 (168)
379 2wfh_A SLIT homolog 2 protein 99.6 2.4E-15 8.3E-20 149.6 13.1 125 70-198 13-137 (193)
380 2je0_A Acidic leucine-rich nuc 99.6 5.7E-16 2E-20 147.2 7.8 129 66-220 16-149 (149)
381 2je0_A Acidic leucine-rich nuc 99.6 5.8E-16 2E-20 147.1 7.3 127 91-243 17-149 (149)
382 2wfh_A SLIT homolog 2 protein 99.6 3.2E-15 1.1E-19 148.8 12.7 108 140-248 32-140 (193)
383 2o6r_A Variable lymphocyte rec 99.6 4.9E-15 1.7E-19 145.1 12.6 91 161-251 50-141 (177)
384 4fdw_A Leucine rich hypothetic 99.6 1.1E-14 3.9E-19 161.5 16.8 232 13-254 128-365 (401)
385 2o6r_A Variable lymphocyte rec 99.6 5.8E-15 2E-19 144.6 12.8 132 69-227 9-140 (177)
386 4gyi_A RIO2 kinase; protein ki 99.6 3.8E-16 1.3E-20 169.8 4.0 138 575-727 95-264 (397)
387 1ds9_A Outer arm dynein; leuci 99.6 4.9E-17 1.7E-21 162.6 -3.2 155 63-224 14-185 (198)
388 2p1m_B Transport inhibitor res 99.6 1.5E-17 5E-22 195.0 -10.2 266 2-270 189-519 (594)
389 2p1m_B Transport inhibitor res 99.5 1.3E-16 4.4E-21 186.9 -3.8 265 2-270 135-494 (594)
390 3sb4_A Hypothetical leucine ri 99.5 5E-15 1.7E-19 160.3 8.2 96 186-283 225-323 (329)
391 1a9n_A U2A', U2A'; complex (nu 99.5 1.1E-14 3.8E-19 142.4 8.4 133 64-224 16-153 (176)
392 4fdw_A Leucine rich hypothetic 99.5 9.8E-14 3.4E-18 153.9 16.6 230 9-247 146-383 (401)
393 1a9n_A U2A', U2A'; complex (nu 99.5 9.4E-15 3.2E-19 143.0 7.1 128 44-175 19-152 (176)
394 1ds9_A Outer arm dynein; leuci 99.5 1.2E-16 4.1E-21 159.7 -6.7 136 87-227 14-156 (198)
395 3g39_A Variable lymphocyte rec 99.4 3.2E-13 1.1E-17 131.2 9.5 86 67-152 30-115 (170)
396 3g39_A Variable lymphocyte rec 99.4 5.4E-13 1.9E-17 129.7 10.7 105 68-175 10-114 (170)
397 2r9u_A Variable lymphocyte rec 99.4 4.3E-13 1.5E-17 130.9 9.4 86 67-152 33-118 (174)
398 2r9u_A Variable lymphocyte rec 99.4 9.8E-13 3.4E-17 128.3 10.8 105 69-176 14-118 (174)
399 3un9_A NLR family member X1; l 99.3 2.1E-14 7.2E-19 157.8 -7.9 158 67-224 72-252 (372)
400 3un9_A NLR family member X1; l 99.2 1.2E-13 4.2E-18 151.7 -5.4 166 90-255 71-260 (372)
401 2ifg_A High affinity nerve gro 99.2 1.8E-11 6.1E-16 133.2 11.5 130 144-275 13-146 (347)
402 2ifg_A High affinity nerve gro 99.2 1.1E-11 3.6E-16 135.0 9.5 96 55-152 20-116 (347)
403 3tm0_A Aminoglycoside 3'-phosp 99.2 3.8E-11 1.3E-15 125.1 13.3 146 572-727 11-213 (263)
404 1nd4_A Aminoglycoside 3'-phosp 99.0 2.9E-10 1E-14 117.8 8.6 129 584-727 29-214 (264)
405 4fs7_A Uncharacterized protein 98.9 8.4E-09 2.9E-13 114.1 14.8 150 86-242 157-328 (394)
406 2ra8_A Uncharacterized protein 98.9 3.8E-10 1.3E-14 122.9 3.5 157 109-268 166-341 (362)
407 3dxp_A Putative acyl-COA dehyd 98.9 4.3E-09 1.5E-13 114.9 11.1 142 579-727 42-248 (359)
408 3sg8_A APH(2'')-ID; antibiotic 98.9 1.6E-09 5.5E-14 115.4 6.2 186 580-780 25-288 (304)
409 4gt6_A Cell surface protein; l 98.8 4.3E-08 1.5E-12 108.4 17.3 247 14-269 80-369 (394)
410 2ra8_A Uncharacterized protein 98.8 9.6E-10 3.3E-14 119.7 3.7 84 162-245 251-341 (362)
411 4fs7_A Uncharacterized protein 98.8 3.2E-08 1.1E-12 109.4 15.6 218 15-244 156-376 (394)
412 4h09_A Hypothetical leucine ri 98.7 1.9E-07 6.6E-12 102.5 15.3 245 14-267 62-343 (379)
413 4gt6_A Cell surface protein; l 98.6 2.1E-07 7.1E-12 102.9 14.6 244 14-268 107-389 (394)
414 1io0_A Tropomodulin; LRR prote 98.5 2.8E-08 9.4E-13 97.6 1.0 115 62-176 31-164 (185)
415 1io0_A Tropomodulin; LRR prote 98.4 4E-08 1.4E-12 96.5 1.1 118 83-200 28-164 (185)
416 3rw6_A Nuclear RNA export fact 98.4 4.4E-08 1.5E-12 101.3 1.2 80 88-169 167-257 (267)
417 3d1u_A Putative fructosamine-3 98.4 7E-07 2.4E-11 94.0 10.1 142 579-726 19-215 (288)
418 4h09_A Hypothetical leucine ri 98.4 2.6E-06 9E-11 93.3 14.4 146 106-256 208-354 (379)
419 3rw6_A Nuclear RNA export fact 98.4 1E-07 3.6E-12 98.5 2.8 81 136-217 167-257 (267)
420 3r70_A Aminoglycoside phosphot 98.3 1.3E-06 4.5E-11 93.5 10.2 185 576-777 38-296 (320)
421 3tdw_A Gentamicin resistance p 98.2 6.5E-06 2.2E-10 87.4 11.4 137 580-728 24-225 (306)
422 4gkh_A Aminoglycoside 3'-phosp 98.2 5.9E-06 2E-10 85.8 10.8 135 582-727 31-223 (272)
423 3ats_A Putative uncharacterize 98.1 8.2E-06 2.8E-10 88.5 9.5 81 580-660 25-122 (357)
424 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.5E-05 5.2E-10 86.7 11.4 144 579-728 45-244 (362)
425 2q83_A YTAA protein; 2635576, 97.8 3E-05 1E-09 83.3 8.5 142 581-727 38-252 (346)
426 2olc_A MTR kinase, methylthior 97.7 8.9E-05 3E-09 81.6 10.7 75 580-656 35-120 (397)
427 3e4g_A ATP synthase subunit S, 97.7 1.7E-05 5.9E-10 76.1 4.2 84 67-150 61-150 (176)
428 3f7w_A Putative fructosamine-3 97.7 0.00016 5.6E-09 75.7 10.8 79 575-657 15-96 (288)
429 3e4g_A ATP synthase subunit S, 97.6 2E-05 6.9E-10 75.6 3.0 83 91-173 61-149 (176)
430 3jr1_A Putative fructosamine-3 97.5 0.00038 1.3E-08 73.7 11.5 140 579-723 40-232 (312)
431 2pyw_A Uncharacterized protein 97.4 9.4E-05 3.2E-09 82.2 5.4 79 696-776 231-313 (420)
432 1pgv_A TMD-1, tropomodulin TMD 97.3 6.5E-05 2.2E-09 73.5 2.0 64 65-128 39-111 (197)
433 1pgv_A TMD-1, tropomodulin TMD 97.3 5.1E-05 1.7E-09 74.2 1.2 94 59-152 62-170 (197)
434 2ppq_A HSK, HK, homoserine kin 97.2 0.0015 5.1E-08 69.4 11.0 160 565-727 7-217 (322)
435 3csv_A Aminoglycoside phosphot 96.8 0.0043 1.5E-07 66.2 10.7 143 581-728 24-218 (333)
436 1nw1_A Choline kinase (49.2 KD 96.7 0.0018 6.3E-08 71.8 7.4 73 580-658 78-159 (429)
437 1zyl_A Hypothetical protein YI 96.7 0.0057 2E-07 64.9 10.9 143 581-727 32-223 (328)
438 3dxq_A Choline/ethanolamine ki 96.7 0.0037 1.3E-07 65.7 9.2 139 580-727 23-202 (301)
439 2qg7_A Ethanolamine kinase PV0 96.7 0.0093 3.2E-07 66.6 12.3 74 580-658 113-188 (458)
440 3feg_A Choline/ethanolamine ki 96.5 0.0053 1.8E-07 66.7 8.6 143 580-727 55-254 (379)
441 3rfe_A Platelet glycoprotein I 96.2 0.0061 2.1E-07 55.4 5.9 55 71-127 12-67 (130)
442 3rfe_A Platelet glycoprotein I 96.1 0.0049 1.7E-07 56.0 4.8 38 67-104 31-68 (130)
443 3c5i_A Choline kinase; choline 96.1 0.0077 2.6E-07 65.3 7.0 74 580-658 38-121 (369)
444 3i1a_A Spectinomycin phosphotr 95.8 0.035 1.2E-06 59.3 10.5 32 696-727 205-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.2 0.037 1.3E-06 60.4 8.2 143 580-726 57-279 (401)
446 3mes_A Choline kinase; malaria 94.6 0.091 3.1E-06 57.8 9.5 142 580-727 75-291 (424)
447 2yle_A Protein spire homolog 1 87.3 1.1 3.8E-05 44.0 7.0 103 655-778 32-135 (229)
448 3g15_A CK, chetk-alpha, cholin 86.5 0.63 2.2E-05 50.7 5.5 30 698-727 245-280 (401)
449 2ks1_B Epidermal growth factor 80.9 1.3 4.6E-05 31.3 3.2 26 520-545 13-39 (44)
450 2jwa_A Receptor tyrosine-prote 80.8 0.65 2.2E-05 32.7 1.5 25 520-544 13-38 (44)
451 2k1k_A Ephrin type-A receptor 80.6 1.1 3.7E-05 30.7 2.6 16 517-532 9-24 (38)
452 3cxl_A N-chimerin; SH2, RHO-GA 78.8 0.29 9.9E-06 54.5 -1.2 61 579-642 146-215 (463)
453 4ann_A ESSB; membrane protein, 78.3 5.9 0.0002 38.7 8.1 116 629-780 43-158 (215)
454 2l2t_A Receptor tyrosine-prote 78.0 1.2 4.2E-05 31.4 2.3 26 520-545 12-38 (44)
455 2l8s_A Integrin alpha-1; trans 67.4 2.7 9.3E-05 30.9 2.0 32 518-549 9-40 (54)
456 2k9y_A Ephrin type-A receptor 66.2 2.6 8.7E-05 29.3 1.7 14 519-532 14-27 (41)
457 4ano_A ESSB; membrane protein, 65.5 12 0.0004 36.6 6.9 84 629-726 48-132 (219)
458 2knc_A Integrin alpha-IIB; tra 59.8 5.2 0.00018 29.6 2.3 33 517-549 11-43 (54)
459 2k1a_A Integrin alpha-IIB; sin 59.1 7.5 0.00026 27.1 2.9 31 518-548 10-40 (42)
460 2ks1_B Epidermal growth factor 51.6 18 0.00061 25.5 3.9 9 522-530 11-19 (44)
461 2l2t_A Receptor tyrosine-prote 48.0 12 0.00039 26.5 2.4 20 522-541 10-30 (44)
462 2lz0_A Uncharacterized protein 44.7 44 0.0015 28.0 6.3 41 179-220 12-52 (100)
463 2lz0_A Uncharacterized protein 42.9 42 0.0014 28.2 5.8 49 148-197 5-53 (100)
464 2k1k_A Ephrin type-A receptor 42.1 8.6 0.00029 26.2 1.0 23 513-535 9-31 (38)
465 2jwa_A Receptor tyrosine-prote 32.5 21 0.00072 25.1 1.8 21 524-544 14-34 (44)
466 1cja_A Protein (actin-fragmin 30.4 65 0.0022 33.5 5.9 138 580-729 74-239 (342)
467 2l34_A TYRO protein tyrosine k 27.2 40 0.0014 22.1 2.3 23 519-541 7-30 (33)
468 2zxe_G FXYD10, phospholemman-l 26.4 41 0.0014 26.3 2.6 28 522-550 22-49 (74)
469 1iij_A ERBB-2 receptor protein 22.8 13 0.00046 24.7 -0.6 7 537-543 27-33 (35)
470 2jp3_A FXYD domain-containing 21.1 35 0.0012 26.1 1.3 23 522-545 20-42 (67)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.9e-47 Score=403.06 Aligned_cols=206 Identities=30% Similarity=0.540 Sum_probs=179.3
Q ss_pred cCCCCCCeeccCCCccEEEeEee------CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA------DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46777899999999999999863 478899999987666667889999999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCC---------ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEE
Q 043333 649 IYEYMENNSLARALFGPE---------EHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKI 719 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~---------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl 719 (809)
|||||++|+|.++|+... .....++|.++..++.|||+||+|||++ +||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999996432 2345799999999999999999999998 8999999999999999999999
Q ss_pred EecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 720 SDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 720 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
+|||+|+....... .......||+.|||||++.++.++.++|||||||++|||+| |+.||...+
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~ 235 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 235 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999986644332 22334579999999999999999999999999999999999 899997653
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.6e-46 Score=403.45 Aligned_cols=206 Identities=30% Similarity=0.510 Sum_probs=173.4
Q ss_pred cCCCCCCeeccCCCccEEEeEee------CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA------DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
++|...++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45666789999999999999864 478999999987666667889999999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCc-----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCce
Q 043333 649 IYEYMENNSLARALFGPEE-----------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNP 717 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 717 (809)
|||||++|+|.++++.... ...+++|.+++.|+.|||+||+|||++ +||||||||+||||++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 9999999999999975432 234699999999999999999999998 89999999999999999999
Q ss_pred EEEecCCccccCCCC-cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 718 KISDFGLAKLDEEDN-THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 718 kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
||+|||+|+...... .......+||+.|||||++.+..++.++|||||||++|||+| |+.||...+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~ 265 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC
Confidence 999999998664332 223345679999999999999999999999999999999999 899997643
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7e-46 Score=397.42 Aligned_cols=205 Identities=30% Similarity=0.456 Sum_probs=176.8
Q ss_pred CCCCCCeeccCCCccEEEeEee------CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 576 NFAPDNKIGEGGFGPVYKGLLA------DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 576 ~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
+++..+.||+|+||+||+|.+. +++.||||+++.... ...++|.+|++++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3456788999999999999863 468899999976543 335689999999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCc------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc
Q 043333 649 IYEYMENNSLARALFGPEE------------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN 716 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 716 (809)
|||||++|+|.++|+.... ....++|..+..|+.|||+||+|||++ +||||||||+||||+++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999965321 234699999999999999999999998 8999999999999999999
Q ss_pred eEEEecCCccccCCCC-cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 717 PKISDFGLAKLDEEDN-THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 717 ~kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
+||+|||+|+...... .......+||+.|||||++.++.++.++|||||||++|||+| |+.||...+
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~ 252 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence 9999999998654322 223345679999999999999999999999999999999999 899997653
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.9e-45 Score=397.48 Aligned_cols=200 Identities=28% Similarity=0.501 Sum_probs=181.1
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcc
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYM 653 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~ 653 (809)
+.|+..++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56888999999999999999965 68999999997666566677999999999999999999999999999999999999
Q ss_pred cCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc
Q 043333 654 ENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 733 (809)
Q Consensus 654 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 733 (809)
++|+|.+++. +..+++..+..++.||+.||+|||++ +||||||||+||||+.++++||+|||+|+.......
T Consensus 154 ~gg~L~~~l~-----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 154 EGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp TTEEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCcHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 9999999983 34689999999999999999999998 899999999999999999999999999987654332
Q ss_pred ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.....+||+.|||||++.+..++.++||||+||++|||++|+.||...+
T Consensus 226 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 274 (346)
T 4fih_A 226 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 274 (346)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 2345789999999999999999999999999999999999999997643
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-45 Score=393.31 Aligned_cols=202 Identities=26% Similarity=0.414 Sum_probs=180.3
Q ss_pred cCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEeccc---CcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
++|+..+.||+|+||+||+|+. .+|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688999999999999999995 46899999999654 2334567899999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999994 345689999999999999999999998 899999999999999999999999999997754
Q ss_pred CCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
... ......+||+.|||||++.+..++.++||||+||++|||+||+.||...+
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 238 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 332 23445789999999999999999999999999999999999999997643
No 6
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-45 Score=391.33 Aligned_cols=200 Identities=30% Similarity=0.488 Sum_probs=168.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.+++...++||+|+||+||+|++.+ .||||+++... .+..++|.+|++++++++|||||+++|+|.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3567778999999999999998753 58999986542 3345679999999999999999999998864 56899999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
||++|+|.++|+.. ..+++|..+..|+.|||+||+|||++ +||||||||+||||++++++||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred cCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999999643 34699999999999999999999998 8999999999999999999999999999876433
Q ss_pred C-cceeccccccccccchhhhcc---CCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 732 N-THISTRIAGTFGYMAPEYAMR---GYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 732 ~-~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
. .......+||+.|||||++.+ +.++.++|||||||++|||+||+.||...
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~ 240 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCC
Confidence 2 223345689999999999864 46899999999999999999999999764
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.6e-45 Score=397.04 Aligned_cols=204 Identities=24% Similarity=0.420 Sum_probs=173.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.|.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999999964 68999999996542 233567899999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
|||++|+|.+++... ....+++..+..++.||+.||+|||++ +||||||||+||||++++++||+|||+|+....
T Consensus 103 Ey~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp ECCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred eCCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 999999999999532 234578999999999999999999998 899999999999999999999999999987643
Q ss_pred CCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. ......+||+.|||||++.+..++.++||||+||++|||+||+.||...+
T Consensus 178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 229 (350)
T 4b9d_A 178 TV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229 (350)
T ss_dssp HH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred Cc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 21 22334679999999999999999999999999999999999999997653
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2e-44 Score=399.00 Aligned_cols=201 Identities=28% Similarity=0.499 Sum_probs=181.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
.+.|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+.+.+|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 356899999999999999999964 6899999999776666667899999999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
|++|+|.+++. ...+++..+..++.||+.||+|||++ +||||||||+||||+.++++||+|||+|+......
T Consensus 230 ~~gG~L~~~i~-----~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 230 LEGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp CTTEEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCCcHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 99999999983 34589999999999999999999998 89999999999999999999999999998765433
Q ss_pred cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 733 THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
. .....+||+.|||||++.+..++.++|||||||++|||++|+.||...+
T Consensus 302 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 351 (423)
T 4fie_A 302 P-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 351 (423)
T ss_dssp C-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred c-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 2 2345789999999999999999999999999999999999999997643
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.1e-45 Score=387.71 Aligned_cols=201 Identities=27% Similarity=0.389 Sum_probs=170.6
Q ss_pred cCCCCCCeeccCCCccEEEeEee----CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA----DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
++|++.+.||+|+||+||+|+.. .++.||||+++... ......+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57899999999999999999852 46899999987542 2234568899999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
|||||++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999994 344689999999999999999999998 8999999999999999999999999999865
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... .....+||+.|||||++.+..++.++||||+||++|||+||+.||...+
T Consensus 177 ~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 230 (304)
T 3ubd_A 177 IDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230 (304)
T ss_dssp ----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC
Confidence 43322 2335689999999999999999999999999999999999999997654
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.1e-44 Score=374.85 Aligned_cols=199 Identities=29% Similarity=0.483 Sum_probs=162.5
Q ss_pred cCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
++|++.+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999985 468999999986542 223457899999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+ +|+|.+++. .+.++++..+..++.|++.||+|||++ +|+||||||+|||+++++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHH----HSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 689999884 345699999999999999999999998 899999999999999999999999999987643
Q ss_pred CCcceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||...+
T Consensus 165 ~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~ 216 (275)
T 3hyh_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC
Confidence 32 2234689999999999988765 689999999999999999999997643
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.7e-44 Score=378.95 Aligned_cols=196 Identities=31% Similarity=0.492 Sum_probs=168.0
Q ss_pred CCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEe----CCeEEEEE
Q 043333 578 APDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIE----GNQLLLIY 650 (809)
Q Consensus 578 ~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~----~~~~~lV~ 650 (809)
+..+.||+|+||+||+|... +++.||||++.... ....+.|.+|++++++++|||||+++++|.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999965 58899999986542 2335679999999999999999999999875 34579999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCCceEEEecCCccccC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAKLDE 729 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kl~DfGla~~~~ 729 (809)
|||++|+|.+++. ....+++..+..++.||+.||+|||+++ ++||||||||+||||+ +++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999994 3456899999999999999999999983 2499999999999998 47999999999998644
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
.. .....+||+.|||||++.+ .++.++|||||||++|||+||+.||...
T Consensus 184 ~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~ 232 (290)
T 3fpq_A 184 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 32 2335689999999998865 6899999999999999999999999653
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.2e-44 Score=385.82 Aligned_cols=197 Identities=29% Similarity=0.334 Sum_probs=170.9
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcc
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYM 653 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~ 653 (809)
+.|...++||+|+||+||+|+.. +|+.||||+++... .+.+|++++++++|||||++++++.+++..++|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45777889999999999999964 68999999996532 2347999999999999999999999999999999999
Q ss_pred cCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC-ceEEEecCCccccCCCC
Q 043333 654 ENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL-NPKISDFGLAKLDEEDN 732 (809)
Q Consensus 654 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~~~~~ 732 (809)
++|+|.+++. ....+++..+..++.||+.||+|||++ +||||||||+||||+.++ ++||+|||+|+......
T Consensus 133 ~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 133 EGGSLGQLIK----QMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp TTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 9999999994 334699999999999999999999998 899999999999999987 69999999998765432
Q ss_pred cc----eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 733 TH----ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 733 ~~----~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. .....+||+.|||||++.+..++.++||||+||++|||+||+.||...+
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~ 260 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 260 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 21 1223579999999999999999999999999999999999999997644
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.1e-43 Score=378.69 Aligned_cols=198 Identities=33% Similarity=0.450 Sum_probs=162.6
Q ss_pred cCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHH--HHHHHHhhcCCCceEeEEeEEEeCC----eEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFV--NEIGMISALQHPNLVKLYGCCIEGN----QLLL 648 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~--~Ei~~l~~l~H~nIv~l~~~~~~~~----~~~l 648 (809)
++|...+.||+|+||+||+|++ +|+.||||++.... .+++. .|+..+.+++|||||+++|+|.+++ .+++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 3466778999999999999987 58999999986432 23344 4555567889999999999998754 6899
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEcCCCCCCEEEcCCCceEEEecC
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEE-----SRLKIVHRDIKATNVLLDKDLNPKISDFG 723 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 723 (809)
|||||++|+|.++|+ ..+++|..+.+++.|+|+||+|||++ +.++||||||||+|||+++++++||+|||
T Consensus 79 V~Ey~~~gsL~~~l~-----~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEECCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EecCCCCCcHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999994 34689999999999999999999976 24589999999999999999999999999
Q ss_pred CccccCCCCcce---eccccccccccchhhhccC------CCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 724 LAKLDEEDNTHI---STRIAGTFGYMAPEYAMRG------YLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 724 la~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
+|+......... ....+||+.|||||++.+. .++.++|||||||++|||+||++||..
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 998765433221 2245799999999998754 367899999999999999999887743
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.9e-43 Score=385.23 Aligned_cols=215 Identities=27% Similarity=0.391 Sum_probs=182.6
Q ss_pred cHHHHHHHhcCCCCCCeeccCCCccEEEeEeeC------CeEEEEEEecccCc-ccchhHHHHHHHHhhcCC-CceEeEE
Q 043333 566 TLRQIKAATNNFAPDNKIGEGGFGPVYKGLLAD------GKVIAVKQLSSKSK-QGNREFVNEIGMISALQH-PNLVKLY 637 (809)
Q Consensus 566 ~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H-~nIv~l~ 637 (809)
...+.+...++|+..+.||+|+||+||+|.+.. ++.||||++..... ...++|.+|+++|.+++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 344455567889999999999999999998642 36899999976543 335679999999999965 8999999
Q ss_pred eEEEeC-CeEEEEEEcccCCchhhhccCCCc------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCC
Q 043333 638 GCCIEG-NQLLLIYEYMENNSLARALFGPEE------------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDI 704 (809)
Q Consensus 638 ~~~~~~-~~~~lV~ey~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dl 704 (809)
|+|.++ +..++|||||++|+|.++|+.... ....++|..+..++.|||+||+|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999775 568999999999999999964321 234589999999999999999999998 8999999
Q ss_pred CCCCEEEcCCCceEEEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 705 KATNVLLDKDLNPKISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 705 kp~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
||+|||+++++.+||+|||+|+....... ......+||+.|||||++.++.++.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999987654433 23445679999999999999999999999999999999998 99999764
Q ss_pred C
Q 043333 783 T 783 (809)
Q Consensus 783 ~ 783 (809)
+
T Consensus 292 ~ 292 (353)
T 4ase_A 292 K 292 (353)
T ss_dssp C
T ss_pred C
Confidence 3
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=7.6e-42 Score=365.07 Aligned_cols=200 Identities=25% Similarity=0.451 Sum_probs=161.5
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeCC--------
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEGN-------- 644 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~-------- 644 (809)
++|+..+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888999999999999999964 689999999865433 23467899999999999999999999987654
Q ss_pred ----eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEE
Q 043333 645 ----QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 720 (809)
Q Consensus 645 ----~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~ 720 (809)
..++|||||++|+|.+++..... ....++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 36899999999999999965322 23457788899999999999999998 89999999999999999999999
Q ss_pred ecCCccccCCCCcc-----------eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 721 DFGLAKLDEEDNTH-----------ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 721 DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
|||+|+........ ..+..+||+.|||||++.+..++.++|||||||++|||++ ||..
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~ 229 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST 229 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence 99999876543211 1223579999999999999999999999999999999996 7754
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=369.39 Aligned_cols=205 Identities=22% Similarity=0.371 Sum_probs=174.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeC------C
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEG------N 644 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~------~ 644 (809)
.++|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++... +
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 367999999999999999999964 689999999975432 2345688999999999999999999998643 5
Q ss_pred eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCC
Q 043333 645 QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 724 (809)
Q Consensus 645 ~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 724 (809)
..|+|||||+ |+|.+++.. ..++++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 689998843 45799999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCC---cceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCccc
Q 043333 725 AKLDEEDN---THISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNVICRTKEA 786 (809)
Q Consensus 725 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~elltGk~P~~~~~~~~ 786 (809)
|+.+.... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~ 270 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 270 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH
Confidence 98664321 2223457899999999998774 57999999999999999999999998765433
No 17
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.2e-40 Score=382.49 Aligned_cols=223 Identities=28% Similarity=0.377 Sum_probs=181.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHH---HHHHhhcCCCceEeEEeEEEeCCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNE---IGMISALQHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~E---i~~l~~l~H~nIv~l~~~~~~~~~~ 646 (809)
.++|++.+.||+|+||+||+|+.. +|+.||||++.+.. ......+.+| +++++.++|||||++++++.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999965 68999999996542 2222333344 5667778999999999999999999
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
|+|||||++|+|.++|. ....+++..+..++.||+.||+|||++ +||||||||+||||+.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~----~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLS----QHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999994 345689999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCcccchhHHHHHHHhhccCCCCc
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTKEAQFCLLDWVTLALTDFRFPL 805 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~~~~~~l~~~~~~~~~~~~~p~ 805 (809)
...... ....+||+.|||||++.+ ..++.++||||+||++|||++|+.||...+..+...+.+.+ .-....+|+
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i--~~~~~~~p~ 415 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPD 415 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH--HHCCCCCCT
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh--cCCCCCCCc
Confidence 765432 234689999999999975 57899999999999999999999999764333322222222 223455665
Q ss_pred CCC
Q 043333 806 FLS 808 (809)
Q Consensus 806 ~~~ 808 (809)
.+|
T Consensus 416 ~~S 418 (689)
T 3v5w_A 416 SFS 418 (689)
T ss_dssp TSC
T ss_pred cCC
Confidence 543
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.3e-39 Score=357.23 Aligned_cols=198 Identities=27% Similarity=0.426 Sum_probs=170.2
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEee----CCeEEEEEEecccCcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeE
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLLA----DGKVIAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 646 (809)
...++|++.+.||+|+||+||+|+.+ .++.||||++.... ...++.+|+++|..+ +|||||++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34678999999999999999999853 46789999986543 245678999999998 699999999999999999
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC-CceEEEecCCc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD-LNPKISDFGLA 725 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kl~DfGla 725 (809)
++||||+++|+|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +++||+|||+|
T Consensus 96 ~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 99999999999999882 378999999999999999999998 89999999999999877 79999999999
Q ss_pred cccCCCCc---------------------------ceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHcCCC
Q 043333 726 KLDEEDNT---------------------------HISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRS 777 (809)
Q Consensus 726 ~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~elltGk~ 777 (809)
+....... ......+||+.|||||++.+. .++.++||||+||++|||++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 75533211 112235799999999999775 58999999999999999999999
Q ss_pred CCCC
Q 043333 778 NVIC 781 (809)
Q Consensus 778 P~~~ 781 (809)
||..
T Consensus 246 Pf~~ 249 (361)
T 4f9c_A 246 PFYK 249 (361)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 9965
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.6e-39 Score=375.97 Aligned_cols=202 Identities=25% Similarity=0.384 Sum_probs=180.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
.++|++.+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++|+.++|||||++++++.+.+..++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999964 6899999999766555567788999999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC--CceEEEecCCccccCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD--LNPKISDFGLAKLDEE 730 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~--~~~kl~DfGla~~~~~ 730 (809)
|++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 236 ~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 999999999843 234689999999999999999999998 89999999999999854 8999999999997754
Q ss_pred CCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. .....+||+.|||||++.+..++.++||||+||++|||++|+.||...+
T Consensus 310 ~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~ 360 (573)
T 3uto_A 310 KQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360 (573)
T ss_dssp TS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred CC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 33 2334689999999999999999999999999999999999999997654
No 20
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=9.9e-39 Score=346.71 Aligned_cols=243 Identities=42% Similarity=0.775 Sum_probs=209.2
Q ss_pred CCccHHHHHHHhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEE
Q 043333 563 GSFTLRQIKAATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCI 641 (809)
Q Consensus 563 ~~~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~ 641 (809)
..++..++....++|+..+.||+|+||.||+|...+|+.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 46888999999999999999999999999999988899999999876543 33457899999999999999999999999
Q ss_pred eCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEe
Q 043333 642 EGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISD 721 (809)
Q Consensus 642 ~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 721 (809)
+.+..++||||+++|+|.+++.........++|..+..++.|++.||+|||+++.++|+||||||+|||++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 99999999999999999999977666666799999999999999999999998666899999999999999999999999
Q ss_pred cCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC--CcccchhHHHHHHHhhc
Q 043333 722 FGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR--TKEAQFCLLDWVTLALT 799 (809)
Q Consensus 722 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~--~~~~~~~l~~~~~~~~~ 799 (809)
||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||... .......+.+|+.....
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 9999877655555555567999999999999889999999999999999999999999642 12344556777776666
Q ss_pred cCCCCc
Q 043333 800 DFRFPL 805 (809)
Q Consensus 800 ~~~~p~ 805 (809)
....+.
T Consensus 258 ~~~~~~ 263 (326)
T 3uim_A 258 EKKLEA 263 (326)
T ss_dssp SCCSTT
T ss_pred chhhhh
Confidence 554443
No 21
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=8.1e-39 Score=360.18 Aligned_cols=212 Identities=25% Similarity=0.329 Sum_probs=185.3
Q ss_pred cHHHHHHHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEeccc---CcccchhHHHHHHHHhhcCCCceEeEEeEEE
Q 043333 566 TLRQIKAATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLYGCCI 641 (809)
Q Consensus 566 ~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~ 641 (809)
.++++....++|+..++||+|+||+||+|+.. +++.||||++... .....+.+.+|++++..++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34556666789999999999999999999975 4789999998653 2233455889999999999999999999999
Q ss_pred eCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEe
Q 043333 642 EGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISD 721 (809)
Q Consensus 642 ~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 721 (809)
+.+..++|||||++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 999999999999999999999542 34689999999999999999999998 899999999999999999999999
Q ss_pred cCCccccCCCCcceeccccccccccchhhhc-----cCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 722 FGLAKLDEEDNTHISTRIAGTFGYMAPEYAM-----RGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 722 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
||+++.............+||+.|+|||++. .+.++.++|||||||++|||++|+.||...+
T Consensus 219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 285 (437)
T 4aw2_A 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285 (437)
T ss_dssp CTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred hhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence 9999876555444445578999999999987 5678999999999999999999999997654
No 22
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.9e-38 Score=343.78 Aligned_cols=229 Identities=45% Similarity=0.826 Sum_probs=198.2
Q ss_pred HHHHHhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 569 QIKAATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 569 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
++..++++|+..+.||+|+||.||+|...+++.||||++........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 34457789999999999999999999988899999999877666666789999999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++.........++|..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 9999999999999976554555799999999999999999999998 8999999999999999999999999999865
Q ss_pred CCCC-cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCCcccchhHHHHHHHhhcc
Q 043333 729 EEDN-THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRTKEAQFCLLDWVTLALTD 800 (809)
Q Consensus 729 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~~~~~~~l~~~~~~~~~~ 800 (809)
.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||......+...+.+|.......
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262 (321)
T ss_dssp SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence 4322 22233456899999999999999999999999999999999999999876555556667776554433
No 23
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.4e-37 Score=347.38 Aligned_cols=209 Identities=23% Similarity=0.341 Sum_probs=182.7
Q ss_pred HHHHHHHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEeccc---CcccchhHHHHHHHHhhcCCCceEeEEeEEEe
Q 043333 567 LRQIKAATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLYGCCIE 642 (809)
Q Consensus 567 ~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~ 642 (809)
.+++....++|+..+.||+|+||+||+|+.. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556789999999999999999999965 5889999998653 22335668899999999999999999999999
Q ss_pred CCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEec
Q 043333 643 GNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 722 (809)
Q Consensus 643 ~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~Df 722 (809)
.+..++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~-----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMS-----NYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 999999999999999999983 23588999999999999999999998 8999999999999999999999999
Q ss_pred CCccccCCCCcceeccccccccccchhhhccCC----CCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 723 GLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGY----LTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 723 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
|+++.............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 277 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC
Confidence 999876654433444678999999999998655 7889999999999999999999997644
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.2e-37 Score=326.96 Aligned_cols=201 Identities=28% Similarity=0.523 Sum_probs=180.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
.++|+..+.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46899999999999999999985 56899999999766655567789999999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
+++|+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||++.......
T Consensus 99 ~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 99999999983 23589999999999999999999998 89999999999999999999999999998765433
Q ss_pred cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 733 THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 171 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 220 (297)
T 3fxz_A 171 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (297)
T ss_dssp CC-BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred cc-cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 234679999999999999999999999999999999999999997643
No 25
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=346.10 Aligned_cols=212 Identities=23% Similarity=0.310 Sum_probs=184.2
Q ss_pred cHHHHHHHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEE
Q 043333 566 TLRQIKAATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCI 641 (809)
Q Consensus 566 ~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~ 641 (809)
.+++.....++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|.+++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 44555556789999999999999999999964 68999999996532 233456889999999999999999999999
Q ss_pred eCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEe
Q 043333 642 EGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISD 721 (809)
Q Consensus 642 ~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 721 (809)
+.+..++||||+++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSK---FGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHH---HSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 99999999999999999999942 234689999999999999999999998 899999999999999999999999
Q ss_pred cCCccccCCCCcceeccccccccccchhhhc-------cCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 722 FGLAKLDEEDNTHISTRIAGTFGYMAPEYAM-------RGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 722 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
||+++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||...+
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 274 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC
Confidence 9999876554443344568999999999987 3568999999999999999999999997654
No 26
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.5e-36 Score=329.17 Aligned_cols=216 Identities=30% Similarity=0.506 Sum_probs=186.7
Q ss_pred ccCCCCCccHHHHHHHhcC----------CCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHh
Q 043333 558 LDLHTGSFTLRQIKAATNN----------FAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMIS 626 (809)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~----------f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~ 626 (809)
...+.+.++.++++.+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~ 97 (321)
T 2c30_A 18 LYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMR 97 (321)
T ss_dssp -------CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHT
T ss_pred eeecCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHH
Confidence 3445567888888888764 666779999999999999965 69999999997766666677899999999
Q ss_pred hcCCCceEeEEeEEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCC
Q 043333 627 ALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKA 706 (809)
Q Consensus 627 ~l~H~nIv~l~~~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp 706 (809)
+++||||+++++++...+..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||
T Consensus 98 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp 169 (321)
T 2c30_A 98 DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKS 169 (321)
T ss_dssp TCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred hCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCH
Confidence 9999999999999999999999999999999999983 34689999999999999999999998 899999999
Q ss_pred CCEEEcCCCceEEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 707 TNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 707 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
+||+++.++++||+|||++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 170 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~ 244 (321)
T 2c30_A 170 DSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244 (321)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred HHEEECCCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999866543222 23467999999999999999999999999999999999999999764
No 27
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.7e-37 Score=334.78 Aligned_cols=203 Identities=23% Similarity=0.387 Sum_probs=169.7
Q ss_pred HhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
..++|+..+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457889999999999999999995 478999999986553 234567899999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYII----SQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999984 234689999999999999999999998 899999999999999999999999999876544
Q ss_pred CCcceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
.........+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 213 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD 213 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 33333345679999999999988765 89999999999999999999999764
No 28
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.1e-36 Score=330.85 Aligned_cols=201 Identities=28% Similarity=0.437 Sum_probs=177.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46788999999999999999996 578999999986542 233466889999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999842 34689999999999999999999998 899999999999999999999999999986654
Q ss_pred CCcceeccccccccccchhhhccCCCC-chHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYLT-DKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
... ....+||+.|+|||++.+..+. .++||||+||++|||++|+.||...+
T Consensus 167 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 218 (328)
T 3fe3_A 167 GGK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218 (328)
T ss_dssp SCG--GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCc--cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence 322 3456799999999999887764 79999999999999999999997654
No 29
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.2e-36 Score=331.76 Aligned_cols=202 Identities=28% Similarity=0.373 Sum_probs=177.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEeccc---CcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||+||+|+.. +|+.||||+++.. .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357888999999999999999965 6899999999754 233456788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999884 234689999999999999999999998 89999999999999999999999999998643
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 157 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 209 (337)
T 1o6l_A 157 SDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209 (337)
T ss_dssp CTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence 3222 2335679999999999999999999999999999999999999997643
No 30
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.3e-37 Score=335.11 Aligned_cols=203 Identities=25% Similarity=0.420 Sum_probs=173.1
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEeccc---CcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSK---SKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~---~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~ 647 (809)
..++|+..+.||+|+||+||+|+.. +|+.||||+++.. .....+.+.+|.+++..+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3468999999999999999999965 5899999999754 223345678899999988 6999999999999999999
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 101 lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQ----KSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 9999999999999984 234689999999999999999999998 899999999999999999999999999985
Q ss_pred cCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 728 DEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 228 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence 43322 22335679999999999998889999999999999999999999997654
No 31
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.1e-36 Score=334.78 Aligned_cols=200 Identities=25% Similarity=0.381 Sum_probs=174.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~l 648 (809)
.++|+..+.||+|+||+||+|+.. +++.||||+++... ....+.+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457889999999999999999965 58899999997642 23345688899999887 89999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999999999884 234689999999999999999999998 8999999999999999999999999999853
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 204 ~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 204 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp CCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred ccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 3222 223456899999999999999999999999999999999999999965
No 32
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=323.62 Aligned_cols=202 Identities=30% Similarity=0.523 Sum_probs=177.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
.++|...+.||+|+||+||+|... +++.||+|++........+.|.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357788899999999999999964 5899999998766666677899999999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 89 IKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999943 245689999999999999999999998 89999999999999999999999999998654332
Q ss_pred cce-------------eccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 733 THI-------------STRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 733 ~~~-------------~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.|+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~ 224 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence 211 1145799999999999999999999999999999999999999865
No 33
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-36 Score=325.64 Aligned_cols=199 Identities=28% Similarity=0.448 Sum_probs=176.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357888999999999999999965 68999999986542 23345678899999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999842 34689999999999999999999998 89999999999999999999999999998654
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 207 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 32 234579999999999999999999999999999999999999997643
No 34
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.2e-36 Score=329.25 Aligned_cols=205 Identities=27% Similarity=0.441 Sum_probs=177.5
Q ss_pred HHHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCe
Q 043333 571 KAATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQ 645 (809)
Q Consensus 571 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 645 (809)
....++|...+.||+|+||.||+|+.. +|+.||||+++... ....+.+..|.+++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999965 68999999997542 23345678899999877 89999999999999999
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCc
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 725 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 725 (809)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 9999999999999999842 34689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 726 KLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 726 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
+....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (345)
T 1xjd_A 166 KENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222 (345)
T ss_dssp BCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC
Confidence 85432222 2345679999999999999999999999999999999999999997644
No 35
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.4e-36 Score=322.01 Aligned_cols=203 Identities=29% Similarity=0.415 Sum_probs=172.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc---cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ---GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~---~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|... +++.||+|++...... ..+.|.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467889999999999999999854 6889999998654322 245788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++. ...++++..+..++.|++.||+|||++ +|+||||||+||+++.++++||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIE----SHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999983 234689999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
...........||+.|+|||.+.+..++.++||||+||++|||++|+.||...+
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 216 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 443333345679999999999999999999999999999999999999997643
No 36
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.4e-36 Score=330.55 Aligned_cols=201 Identities=27% Similarity=0.436 Sum_probs=176.3
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57888999999999999999965 58899999986542 334567889999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999843 34689999999999999999999998 899999999999999999999999999987653
Q ss_pred CCcceeccccccccccchhhhcc---CCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMR---GYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
.. .....+||+.|+|||++.. ..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~ 222 (384)
T 4fr4_A 168 ET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS 222 (384)
T ss_dssp TC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT
T ss_pred CC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC
Confidence 32 2345679999999999864 4589999999999999999999999976443
No 37
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.2e-35 Score=320.55 Aligned_cols=204 Identities=28% Similarity=0.455 Sum_probs=173.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcc--cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQ--GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~--~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|+..+.||+|+||+||+|+..+|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 4678899999999999999999888999999998654322 24578899999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++ +|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9985 88887743 334589999999999999999999998 8999999999999999999999999999876433
Q ss_pred Ccceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCcc
Q 043333 732 NTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTKE 785 (809)
Q Consensus 732 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~~ 785 (809)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 173 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 226 (311)
T 3niz_A 173 VR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD 226 (311)
T ss_dssp CC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT
T ss_pred cc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH
Confidence 22 2234568999999999876 56899999999999999999999999775433
No 38
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.2e-36 Score=328.02 Aligned_cols=203 Identities=25% Similarity=0.363 Sum_probs=177.0
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~ 647 (809)
..++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+..|.+++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999975 47899999987542 23346678899999988 7999999999999999999
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999999842 34689999999999999999999998 899999999999999999999999999985
Q ss_pred cCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 728 DEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 225 (353)
T 2i0e_A 171 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225 (353)
T ss_dssp CCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC
Confidence 432222 2335679999999999999999999999999999999999999997643
No 39
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.6e-35 Score=325.79 Aligned_cols=202 Identities=27% Similarity=0.378 Sum_probs=177.8
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc------cchhHHHHHHHHhhcCCCceEeEEeEEEeCCe
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ------GNREFVNEIGMISALQHPNLVKLYGCCIEGNQ 645 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 645 (809)
..++|+..+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3567889999999999999999965 6899999998765322 23568899999999999999999999999999
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC----ceEEEe
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISD 721 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kl~D 721 (809)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 9999999999999999943 34689999999999999999999998 899999999999998877 799999
Q ss_pred cCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 722 FGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 722 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
||++........ ....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 163 FG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~ 222 (361)
T 2yab_A 163 FGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222 (361)
T ss_dssp CSSCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred cCCceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 999987654322 234679999999999999899999999999999999999999997643
No 40
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-35 Score=325.40 Aligned_cols=199 Identities=26% Similarity=0.381 Sum_probs=174.7
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc---ccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK---QGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV 649 (809)
++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|.+++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888999999999999999965 589999999975432 2245578899999988 899999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999884 234689999999999999999999998 89999999999999999999999999998543
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
.... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 162 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 162 RPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp CTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 2222 23456799999999999999999999999999999999999999965
No 41
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.8e-36 Score=322.60 Aligned_cols=209 Identities=33% Similarity=0.510 Sum_probs=170.0
Q ss_pred HHHhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 571 KAATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 571 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
....++|++.+.||+|+||+||+|.. +|+.||||++..... ...++|.+|++++++++||||+++++++.+.+..++
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 33457888999999999999999986 588999999875532 234578899999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++.... ....+++..+..++.|++.||+|||++++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 112 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTSSS-CCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCC-CEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999995432 12248999999999999999999999821 2999999999999999999999999999754
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~ 243 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN 243 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4322 12234578999999999999999999999999999999999999997643
No 42
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.2e-35 Score=322.70 Aligned_cols=202 Identities=27% Similarity=0.423 Sum_probs=167.6
Q ss_pred hcCCCCCCeeccCCCccEEEeEe----eCCeEEEEEEecccC----cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCe
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL----ADGKVIAVKQLSSKS----KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQ 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~----~~g~~vAVK~~~~~~----~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 645 (809)
.++|+..+.||+|+||.||+++. .+|+.||||+++... ......+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999986 468999999987542 2234567889999999999999999999999999
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCc
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 725 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 725 (809)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999984 234688999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 726 KLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 726 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
+....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 169 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 225 (327)
T 3a62_A 169 KESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence 75433222 2234679999999999999899999999999999999999999997643
No 43
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.2e-35 Score=325.63 Aligned_cols=199 Identities=23% Similarity=0.355 Sum_probs=177.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367889999999999999999965 68999999986542 23346788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999999842 34689999999999999999999998 89999999999999999999999999998654
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 242 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC
Confidence 32 234579999999999999999999999999999999999999997643
No 44
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=331.91 Aligned_cols=203 Identities=17% Similarity=0.195 Sum_probs=174.3
Q ss_pred HhcCCCCCCeeccCCCccEEEeE------eeCCeEEEEEEecccCcccchhHHHHHHHHhhcC---CCceEeEEeEEEeC
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGL------LADGKVIAVKQLSSKSKQGNREFVNEIGMISALQ---HPNLVKLYGCCIEG 643 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~------~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~---H~nIv~l~~~~~~~ 643 (809)
..++|...+.||+|+||+||+|. ..+++.||||++... ...++..|++++..++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45678889999999999999994 446889999998654 3456778888888886 99999999999999
Q ss_pred CeEEEEEEcccCCchhhhccCCCc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---------
Q 043333 644 NQLLLIYEYMENNSLARALFGPEE-HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK--------- 713 (809)
Q Consensus 644 ~~~~lV~ey~~~gsL~~~L~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~--------- 713 (809)
+..++||||+++|+|.+++..... ....++|..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999953221 245699999999999999999999998 8999999999999998
Q ss_pred --CCceEEEecCCccccCC-CCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 714 --DLNPKISDFGLAKLDEE-DNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 714 --~~~~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
++.+||+|||+++.... .........+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 89999999999975432 222334456799999999999999999999999999999999999999854
No 45
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.7e-35 Score=320.99 Aligned_cols=203 Identities=32% Similarity=0.468 Sum_probs=174.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|+..+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467889999999999999999865 689999999865432 334678899999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 9999999999843 34589999999999999999999998 8999999999999999999999999999865432
Q ss_pred Cc-ceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 732 NT-HISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 732 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 212 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 22 22334679999999999987665 778999999999999999999997643
No 46
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.2e-35 Score=328.30 Aligned_cols=207 Identities=29% Similarity=0.460 Sum_probs=176.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEee--------CCeEEEEEEecccCc-ccchhHHHHHHHHhhc-CCCceEeEEeEEEeC
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA--------DGKVIAVKQLSSKSK-QGNREFVNEIGMISAL-QHPNLVKLYGCCIEG 643 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~--------~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~ 643 (809)
.++|...+.||+|+||.||+|... ++..||||+++.... ...+++.+|+++++++ +||||++++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888999999999999999852 356799999975532 3346789999999999 899999999999999
Q ss_pred CeEEEEEEcccCCchhhhccCCCc------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043333 644 NQLLLIYEYMENNSLARALFGPEE------------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL 711 (809)
Q Consensus 644 ~~~~lV~ey~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl 711 (809)
+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999964321 123589999999999999999999998 89999999999999
Q ss_pred cCCCceEEEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 712 DKDLNPKISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 712 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~ 310 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999999986543322 12233457889999999999999999999999999999999 999997643
No 47
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.4e-35 Score=339.13 Aligned_cols=206 Identities=28% Similarity=0.425 Sum_probs=181.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+..|++++++++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367888999999999999999975 68999999996542 23346788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999976554456799999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 341 ~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp TTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred CCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 43322 234579999999999999999999999999999999999999997643
No 48
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.2e-36 Score=314.10 Aligned_cols=203 Identities=30% Similarity=0.533 Sum_probs=178.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYM 653 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~ 653 (809)
.++|+..+.||+|+||.||+|...+++.||||++.... ...+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 35788889999999999999998888999999997543 23467999999999999999999999999999999999999
Q ss_pred cCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc
Q 043333 654 ENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 733 (809)
Q Consensus 654 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 733 (809)
++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 88 ~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 88 EHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999943 234689999999999999999999998 899999999999999999999999999986644332
Q ss_pred ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 22334557788999999999999999999999999999999 999997643
No 49
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-35 Score=322.17 Aligned_cols=201 Identities=20% Similarity=0.330 Sum_probs=177.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
.++|...+.||+|+||.||+|... +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467889999999999999999965 58899999986442 3345688999999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC--CCceEEEecCCccccCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK--DLNPKISDFGLAKLDEE 730 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~--~~~~kl~DfGla~~~~~ 730 (809)
+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 83 ISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 999999999843 234689999999999999999999998 8999999999999987 78999999999987654
Q ss_pred CCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 157 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 207 (321)
T 1tki_A 157 GDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET 207 (321)
T ss_dssp TCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred CCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC
Confidence 332 234578999999999998888999999999999999999999997643
No 50
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.7e-35 Score=317.54 Aligned_cols=206 Identities=29% Similarity=0.469 Sum_probs=162.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|+..+.||+|+||.||+|... +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467889999999999999999854 689999999875533 334678899999999999999999999999999999999
Q ss_pred cccCCchhhhccCCC--ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 652 YMENNSLARALFGPE--EHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 652 y~~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|++ |+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59998884321 2234589999999999999999999998 89999999999999999999999999998764
Q ss_pred CCCcceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.
T Consensus 160 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 214 (317)
T 2pmi_A 160 IPVNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214 (317)
T ss_dssp SCCCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CCccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 33221 234568999999999876 4689999999999999999999999977543
No 51
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1e-35 Score=313.44 Aligned_cols=203 Identities=31% Similarity=0.480 Sum_probs=179.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYM 653 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~ 653 (809)
.++|+..+.||+|+||.||+|...++..||||++..... ..+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467888999999999999999988888999999975433 3467899999999999999999999999999999999999
Q ss_pred cCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc
Q 043333 654 ENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 733 (809)
Q Consensus 654 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 733 (809)
++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 86 SNGCLLNYLRS---HGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp TTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred CCCcHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 99999999843 234589999999999999999999998 899999999999999999999999999987655444
Q ss_pred ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC
Confidence 33344556778999999998889999999999999999999 999997643
No 52
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.3e-35 Score=323.78 Aligned_cols=201 Identities=24% Similarity=0.397 Sum_probs=176.1
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
..++|+..+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4567999999999999999999864 689999999965432 2345688999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC---CceEEEecCCcc
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD---LNPKISDFGLAK 726 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kl~DfGla~ 726 (809)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||++.
T Consensus 107 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999998843 34689999999999999999999998 89999999999999865 459999999998
Q ss_pred ccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 180 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~ 233 (362)
T 2bdw_A 180 EVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 233 (362)
T ss_dssp CCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 6653322 23467999999999999989999999999999999999999999764
No 53
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=318.39 Aligned_cols=201 Identities=26% Similarity=0.381 Sum_probs=176.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc------cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ------GNREFVNEIGMISALQHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 646 (809)
.++|...+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456888999999999999999965 5899999998654321 245688999999999999999999999999999
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC----ceEEEec
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISDF 722 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kl~Df 722 (809)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 999999999999999843 34689999999999999999999998 899999999999999887 8999999
Q ss_pred CCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 723 GLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 723 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
|+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 163 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 221 (326)
T 2y0a_A 163 GLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221 (326)
T ss_dssp TTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred CCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 99987643322 234579999999999998899999999999999999999999997643
No 54
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.3e-35 Score=318.77 Aligned_cols=202 Identities=23% Similarity=0.261 Sum_probs=176.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46788999999999999999995 578999999986543 245788999999999 89999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc-----eEEEecCCcc
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-----PKISDFGLAK 726 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~-----~kl~DfGla~ 726 (809)
|+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 99999998432 34789999999999999999999998 8999999999999998887 9999999998
Q ss_pred ccCCCCcc------eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 727 LDEEDNTH------ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 727 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~ 222 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA 222 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc
Confidence 65433221 12346799999999999999999999999999999999999999987543
No 55
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.4e-35 Score=325.62 Aligned_cols=205 Identities=23% Similarity=0.373 Sum_probs=177.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC-----cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS-----KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-----~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 647 (809)
.++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356888999999999999999864 68999999986431 123567899999999999999999999999999999
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc---eEEEecCC
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDFGL 724 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~DfGl 724 (809)
+||||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988854333445689999999999999999999998 8999999999999987654 99999999
Q ss_pred ccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
+........ .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc
Confidence 987654322 223457999999999999989999999999999999999999999763
No 56
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.2e-35 Score=314.67 Aligned_cols=201 Identities=29% Similarity=0.444 Sum_probs=171.1
Q ss_pred cCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
++|+..+.||+|+||+||+|...+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 56888999999999999999987799999999865432 2346788999999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
+++ +|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 985 898888432 34689999999999999999999998 89999999999999999999999999998654322
Q ss_pred cceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 733 THISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 205 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 1234568999999999876 458999999999999999999999997654
No 57
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.7e-35 Score=326.85 Aligned_cols=202 Identities=28% Similarity=0.406 Sum_probs=167.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc---ccchhHHHHHHH-HhhcCCCceEeEEeEEEeCCeEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK---QGNREFVNEIGM-ISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~f~~Ei~~-l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+..|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 356888999999999999999965 578999999976532 233456677766 567899999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999999842 34688999999999999999999998 8999999999999999999999999999864
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 190 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 243 (373)
T 2r5t_A 190 IEHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243 (373)
T ss_dssp BCCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB
T ss_pred ccCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 33222 2345679999999999999999999999999999999999999997643
No 58
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-35 Score=325.90 Aligned_cols=201 Identities=25% Similarity=0.380 Sum_probs=177.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
.++|+..+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467899999999999999999864 6889999999766554556789999999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC--CCceEEEecCCccccCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK--DLNPKISDFGLAKLDEE 730 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~--~~~~kl~DfGla~~~~~ 730 (809)
+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 999999999843 234689999999999999999999998 8999999999999974 47899999999987654
Q ss_pred CCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 204 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 253 (387)
T 1kob_A 204 DEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 253 (387)
T ss_dssp TSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred Ccc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC
Confidence 332 23356999999999999999999999999999999999999999764
No 59
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=310.75 Aligned_cols=200 Identities=28% Similarity=0.432 Sum_probs=169.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc--------------------------ccchhHHHHHHHHh
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK--------------------------QGNREFVNEIGMIS 626 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--------------------------~~~~~f~~Ei~~l~ 626 (809)
.++|+..+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367889999999999999999854 689999999865421 12356889999999
Q ss_pred hcCCCceEeEEeEEEe--CCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCC
Q 043333 627 ALQHPNLVKLYGCCIE--GNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDI 704 (809)
Q Consensus 627 ~l~H~nIv~l~~~~~~--~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dl 704 (809)
+++||||+++++++.+ .+..++||||+++|+|.+++ ...++++..+..++.|++.||+|||++ +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-----TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-----CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999987 56889999999999998876 234689999999999999999999998 8999999
Q ss_pred CCCCEEEcCCCceEEEecCCccccCCCCcceeccccccccccchhhhccCC---CCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 705 KATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGY---LTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 705 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
||+|||++.++.+||+|||+++....... ......||+.|+|||.+.+.. .+.++|||||||++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654332 233457999999999987655 37889999999999999999999975
Q ss_pred C
Q 043333 782 R 782 (809)
Q Consensus 782 ~ 782 (809)
.
T Consensus 243 ~ 243 (298)
T 2zv2_A 243 E 243 (298)
T ss_dssp S
T ss_pred c
Confidence 4
No 60
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.8e-35 Score=312.33 Aligned_cols=216 Identities=43% Similarity=0.698 Sum_probs=187.1
Q ss_pred CCCccHHHHHHHhcCCCCC------CeeccCCCccEEEeEeeCCeEEEEEEecccC----cccchhHHHHHHHHhhcCCC
Q 043333 562 TGSFTLRQIKAATNNFAPD------NKIGEGGFGPVYKGLLADGKVIAVKQLSSKS----KQGNREFVNEIGMISALQHP 631 (809)
Q Consensus 562 ~~~~~~~~l~~~~~~f~~~------~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~----~~~~~~f~~Ei~~l~~l~H~ 631 (809)
...|++.++..++++|... +.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3578999999999999888 9999999999999986 57899999986542 22346788999999999999
Q ss_pred ceEeEEeEEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043333 632 NLVKLYGCCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL 711 (809)
Q Consensus 632 nIv~l~~~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl 711 (809)
||+++++++.+.+..++||||+++|+|.+++.... ...+++|..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999985432 345689999999999999999999998 89999999999999
Q ss_pred cCCCceEEEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 712 DKDLNPKISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 712 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
++++.+||+|||++........ .......||+.|+|||.+.+ .++.++|||||||++|||++|+.||....
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 238 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence 9999999999999986654322 22334578999999998765 57899999999999999999999997643
No 61
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.2e-35 Score=337.09 Aligned_cols=202 Identities=27% Similarity=0.367 Sum_probs=167.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEeccc---CcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|... +|+.||||++... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467889999999999999999954 6899999998754 233346678899999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHE-ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
|||+++|+|.+++. ....+++..+..++.|++.||+|||+ . +|+||||||+|||++.++++||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999883 23468999999999999999999998 6 8999999999999999999999999999864
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 300 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 300 IKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 33222 2334679999999999999999999999999999999999999997643
No 62
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=322.17 Aligned_cols=203 Identities=31% Similarity=0.486 Sum_probs=173.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee----CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA----DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
.++|++.+.||+|+||.||+|... .+..||||++.... ....+.|.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356778899999999999999964 35579999997653 3345679999999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 9999999999999943 234689999999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCcc--eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 729 EEDNTH--ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 729 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
...... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 258 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 543221 2223446778999999998999999999999999999999 99999664
No 63
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.7e-35 Score=336.86 Aligned_cols=203 Identities=30% Similarity=0.411 Sum_probs=179.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467889999999999999999965 68999999986542 23345688999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999999985432 33589999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 338 ~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~ 389 (576)
T 2acx_A 338 EGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389 (576)
T ss_dssp TTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred cCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 4322 234579999999999999889999999999999999999999997754
No 64
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=9.2e-35 Score=310.37 Aligned_cols=199 Identities=23% Similarity=0.393 Sum_probs=170.1
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc--cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ--GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~--~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
++|+..+.||+|+||+||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57888999999999999999965 5899999998754332 23678899999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++ ++.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 55555522 235689999999999999999999998 8999999999999999999999999999876433
Q ss_pred CcceeccccccccccchhhhccCC-CCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 732 NTHISTRIAGTFGYMAPEYAMRGY-LTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 732 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
.. ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||..
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~ 204 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence 22 223457899999999997765 79999999999999999999888643
No 65
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.2e-35 Score=329.59 Aligned_cols=202 Identities=23% Similarity=0.355 Sum_probs=175.4
Q ss_pred HhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
..++|+..+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 457799999999999999999985 468999999986543 22345688999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc---CCCceEEEecCCcc
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD---KDLNPKISDFGLAK 726 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~---~~~~~kl~DfGla~ 726 (809)
|||+++|+|.+++. .+..+++..+..++.|++.||+|||++ +|+||||||+|||++ +++.+||+|||++.
T Consensus 89 ~E~~~gg~L~~~i~----~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIV----AREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHH----HCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999884 334689999999999999999999998 899999999999998 56789999999998
Q ss_pred ccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~ 216 (444)
T 3soa_A 162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE 216 (444)
T ss_dssp CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc
Confidence 6654332 223467999999999999989999999999999999999999999764
No 66
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=311.83 Aligned_cols=204 Identities=28% Similarity=0.450 Sum_probs=171.3
Q ss_pred HhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCc-----ccchhHHHHHHHHhhcC---CCceEeEEeEEEeC
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSK-----QGNREFVNEIGMISALQ---HPNLVKLYGCCIEG 643 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~-----~~~~~f~~Ei~~l~~l~---H~nIv~l~~~~~~~ 643 (809)
..++|+..+.||+|+||+||+|+. .+++.||||++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999995 4689999999864321 12346777887777765 99999999999876
Q ss_pred C-----eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceE
Q 043333 644 N-----QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPK 718 (809)
Q Consensus 644 ~-----~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 718 (809)
. ..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 5799999997 59999985432 23489999999999999999999998 899999999999999999999
Q ss_pred EEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 719 ISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 719 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
|+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.
T Consensus 161 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 224 (308)
T 3g33_A 161 LADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 224 (308)
T ss_dssp ECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH
T ss_pred EeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999998664332 22456789999999999999999999999999999999999999977543
No 67
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=326.01 Aligned_cols=196 Identities=27% Similarity=0.426 Sum_probs=168.3
Q ss_pred CCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcccCCch
Q 043333 580 DNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSL 658 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~~~gsL 658 (809)
.+.||+|+||.||+|.. .+|+.||||+++.......+++.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56799999999999986 46899999999876555567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE--cCCCceEEEecCCccccCCCCccee
Q 043333 659 ARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL--DKDLNPKISDFGLAKLDEEDNTHIS 736 (809)
Q Consensus 659 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl--~~~~~~kl~DfGla~~~~~~~~~~~ 736 (809)
.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....... .
T Consensus 174 ~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~ 245 (373)
T 2x4f_A 174 FDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--L 245 (373)
T ss_dssp HHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--C
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--c
Confidence 998843 234589999999999999999999998 89999999999999 5678999999999987654332 2
Q ss_pred ccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 737 TRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 737 ~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 292 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 33569999999999998899999999999999999999999997653
No 68
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.1e-35 Score=326.74 Aligned_cols=203 Identities=31% Similarity=0.510 Sum_probs=164.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEee----CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA----DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
.++|+..+.||+|+||.||+|+.. ++..||||+++... ....++|.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999864 46789999987543 3335679999999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 9999999999999953 234689999999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCcce--eccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 729 EEDNTHI--STRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 729 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
....... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~ 254 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 5432211 112345778999999999999999999999999999998 99999654
No 69
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.9e-35 Score=314.10 Aligned_cols=203 Identities=28% Similarity=0.463 Sum_probs=175.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYM 653 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~ 653 (809)
.++|+..+.||+|+||.||+|.+.++..||||++..... ..+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 457888899999999999999988888999999975433 3467899999999999999999999999999999999999
Q ss_pred cCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc
Q 043333 654 ENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 733 (809)
Q Consensus 654 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 733 (809)
++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++++||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 102 ANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp TTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 999999999542 34689999999999999999999998 899999999999999999999999999986644322
Q ss_pred ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.......+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||....
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~ 226 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC
Confidence 22233456788999999999999999999999999999998 999997643
No 70
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-35 Score=320.00 Aligned_cols=199 Identities=28% Similarity=0.453 Sum_probs=173.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEeccc---CcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|.+.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35788999999999999999996 56899999998653 223346788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+ +|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++....
T Consensus 88 ~E~~-~g~l~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIV----EKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 689988884 234689999999999999999999998 89999999999999999999999999998665
Q ss_pred CCCcceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
... .....+||+.|+|||++.+..+ ++++||||+||++|||++|+.||...
T Consensus 160 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~ 211 (336)
T 3h4j_B 160 DGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211 (336)
T ss_dssp TSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred CCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence 432 2234579999999999987765 78999999999999999999999754
No 71
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.6e-35 Score=321.17 Aligned_cols=203 Identities=32% Similarity=0.424 Sum_probs=170.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCC----eEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGN----QLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~----~~~lV 649 (809)
.++|+..+.||+|+||+||+|+.. ++.||||++..... ....+..|+.++++++||||+++++++.+.. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467888999999999999999875 79999999865432 2344566888999999999999999998754 47999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhC-------CCCCeEEcCCCCCCEEEcCCCceEEEec
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEE-------SRLKIVHRDIKATNVLLDKDLNPKISDF 722 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------~~~~iiH~Dlkp~NILl~~~~~~kl~Df 722 (809)
|||+++|+|.+++. ...++|..+..++.|++.||+|||+. +..+|+||||||+|||++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLK-----ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999993 23589999999999999999999986 1237999999999999999999999999
Q ss_pred CCccccCCCCc-ceeccccccccccchhhhccC-----CCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 723 GLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRG-----YLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 723 Gla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-----~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
|+++....... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||....
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 242 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCc
Confidence 99986644322 222345799999999998763 45668899999999999999999997643
No 72
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=314.19 Aligned_cols=203 Identities=25% Similarity=0.350 Sum_probs=175.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCC--eEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGN--QLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~--~~~lV 649 (809)
.++|...+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357888999999999999999965 48999999997543 233567889999999999999999999998765 78999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----cCCCceEEEecCCc
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL----DKDLNPKISDFGLA 725 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kl~DfGla 725 (809)
|||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 99999999999996432 233489999999999999999999998 89999999999999 78888999999999
Q ss_pred cccCCCCcceeccccccccccchhhhc--------cCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 726 KLDEEDNTHISTRIAGTFGYMAPEYAM--------RGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 726 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
+........ ....||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 226 (319)
T 4euu_A 164 RELEDDEQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (319)
T ss_dssp EECCTTCCB--CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred eecCCCCce--eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876543322 3456899999999986 577899999999999999999999999753
No 73
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.8e-35 Score=323.91 Aligned_cols=216 Identities=26% Similarity=0.403 Sum_probs=181.6
Q ss_pred ccHHHHHHHhcCCCCCCeeccCCCccEEEeEee------CCeEEEEEEecccCc-ccchhHHHHHHHHhhc-CCCceEeE
Q 043333 565 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGLLA------DGKVIAVKQLSSKSK-QGNREFVNEIGMISAL-QHPNLVKL 636 (809)
Q Consensus 565 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l 636 (809)
+.........++|+..+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 455566667889999999999999999999742 457899999976432 3346789999999999 79999999
Q ss_pred EeEEEeCCe-EEEEEEcccCCchhhhccCCCcc-----------------------------------------------
Q 043333 637 YGCCIEGNQ-LLLIYEYMENNSLARALFGPEEH----------------------------------------------- 668 (809)
Q Consensus 637 ~~~~~~~~~-~~lV~ey~~~gsL~~~L~~~~~~----------------------------------------------- 668 (809)
+++|.+.+. .++||||+++|+|.+++......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999988654 89999999999999999654321
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc
Q 043333 669 ---------------RLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 733 (809)
Q Consensus 669 ---------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 733 (809)
...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12289999999999999999999998 899999999999999999999999999986543322
Q ss_pred -ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 734 -HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 734 -~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.......||+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 300 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 300 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence 23334568899999999999999999999999999999998 999997643
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.6e-35 Score=315.49 Aligned_cols=203 Identities=24% Similarity=0.430 Sum_probs=171.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeCC-------
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEGN------- 644 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~------- 644 (809)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||++++++|.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888999999999999999975 789999999875433 34567899999999999999999999987643
Q ss_pred --------------------------------------------------eEEEEEEcccCCchhhhccCCCccCCCCCH
Q 043333 645 --------------------------------------------------QLLLIYEYMENNSLARALFGPEEHRLKLDW 674 (809)
Q Consensus 645 --------------------------------------------------~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~ 674 (809)
..++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 37999999999999999965432 334578
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc-----------ceeccccccc
Q 043333 675 PTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT-----------HISTRIAGTF 743 (809)
Q Consensus 675 ~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt~ 743 (809)
..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 88999999999999999998 899999999999999999999999999987654321 1123356999
Q ss_pred cccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 043333 744 GYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVI 780 (809)
Q Consensus 744 ~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~ 780 (809)
.|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~ 277 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM 277 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh
Confidence 9999999999999999999999999999999988763
No 75
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=318.07 Aligned_cols=204 Identities=25% Similarity=0.443 Sum_probs=167.5
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc-cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ-GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~-~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
++|...+.||+|+||+||+|... +++.||||++...... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57888999999999999999965 6899999998654322 233566799999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
++ |+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 98 589888843 234689999999999999999999998 89999999999999999999999999997654322
Q ss_pred cceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCccc
Q 043333 733 THISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTKEA 786 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~~~ 786 (809)
. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 208 (324)
T 3mtl_A 155 K-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred c-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 2 2234568999999999876 568999999999999999999999998755443
No 76
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.6e-35 Score=328.42 Aligned_cols=204 Identities=27% Similarity=0.443 Sum_probs=175.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|...+.||+|+||.||+|.+. +++.||||+++... ....++|.+|++++++++||||++++++|.+.+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457788899999999999999975 68999999987543 2334678999999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 9999999999943 234589999999999999999999998 8999999999999999999999999999864332
Q ss_pred Cccee-ccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 732 NTHIS-TRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 732 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
..... ....+++.|+|||.+.++.++.++|||||||++|||+| |+.||....
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~ 320 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 11111 11235678999999998899999999999999999998 999997643
No 77
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.2e-35 Score=335.41 Aligned_cols=204 Identities=30% Similarity=0.471 Sum_probs=176.6
Q ss_pred HhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
..++|...+.||+|+||.||+|.+.+++.||||+++... ...++|.+|++++++++||||+++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 456788889999999999999999888999999997543 34678999999999999999999999986 5678999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 264 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 264 MAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CTTCBHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred cCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 9999999999542 223578999999999999999999998 89999999999999999999999999998764322
Q ss_pred cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 733 THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
........+++.|+|||++..+.++.++|||||||++|||+| |+.||...+
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~ 390 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC
Confidence 222223446788999999999999999999999999999999 999997643
No 78
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.3e-35 Score=312.64 Aligned_cols=202 Identities=29% Similarity=0.477 Sum_probs=171.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-----eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeC--CeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-----ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEG--NQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~--~~~ 646 (809)
.++|+..+.||+|+||+||+|++ .+++.||||++........+.|.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788899999999999999984 25889999999876655567899999999999999999999999754 458
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 9999999999999999432 33589999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCc--ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 727 LDEEDNT--HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 727 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
....... .......++..|+|||.+.+..++.++|||||||++|||+||+.|+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 7644322 122234577789999999999999999999999999999999999864
No 79
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.9e-34 Score=308.97 Aligned_cols=196 Identities=30% Similarity=0.470 Sum_probs=166.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhh--cCCCceEeEEeEEEeC----CeEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISA--LQHPNLVKLYGCCIEG----NQLL 647 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~~~~~~~----~~~~ 647 (809)
.++|+..+.||+|+||+||+|+. +++.||||++... ..+.+..|.+++.. ++||||+++++++.+. ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 56788999999999999999987 6899999998643 23556677777766 7899999999997653 4579
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEcCCCCCCEEEcCCCceEE
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLH--------EESRLKIVHRDIKATNVLLDKDLNPKI 719 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiH~Dlkp~NILl~~~~~~kl 719 (809)
+||||+++|+|.+++. ...+++..+..++.|++.||+||| +. +|+||||||+|||++.++++||
T Consensus 83 lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEE
T ss_pred EehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEE
Confidence 9999999999999993 346899999999999999999999 65 8999999999999999999999
Q ss_pred EecCCccccCCCCcce---eccccccccccchhhhccC------CCCchHHHHHHHHHHHHHHcC----------CCCCC
Q 043333 720 SDFGLAKLDEEDNTHI---STRIAGTFGYMAPEYAMRG------YLTDKADVYSFGIVALEIVSG----------RSNVI 780 (809)
Q Consensus 720 ~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~ksDVwSlGvil~elltG----------k~P~~ 780 (809)
+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 9999997654433322 2234799999999999876 445799999999999999999 88886
Q ss_pred C
Q 043333 781 C 781 (809)
Q Consensus 781 ~ 781 (809)
.
T Consensus 235 ~ 235 (301)
T 3q4u_A 235 D 235 (301)
T ss_dssp T
T ss_pred c
Confidence 5
No 80
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.8e-35 Score=323.37 Aligned_cols=204 Identities=27% Similarity=0.444 Sum_probs=164.3
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEeccc--CcccchhHHHHHHHHhhcC-CCceEeEEeEEEeCC--e
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSK--SKQGNREFVNEIGMISALQ-HPNLVKLYGCCIEGN--Q 645 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~--~~~~~~~f~~Ei~~l~~l~-H~nIv~l~~~~~~~~--~ 645 (809)
...++|+..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++.++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3467899999999999999999985 46899999998654 2233456788999999997 999999999998654 6
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCc
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 725 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 725 (809)
.++|||||+ |+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 86 ~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIR-----ANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHH-----HTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999998 58998883 24689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCC--------------------Ccceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 726 KLDEED--------------------NTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 726 ~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
+..... ........+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 865321 1112234679999999999876 6789999999999999999999999977543
No 81
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.1e-35 Score=318.49 Aligned_cols=203 Identities=23% Similarity=0.384 Sum_probs=167.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcc---cchhHHHHHHHHhhcCCCceEeEEeEEEeCC----e
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQ---GNREFVNEIGMISALQHPNLVKLYGCCIEGN----Q 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~---~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~----~ 645 (809)
.++|+..+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++++++||||+++++++...+ .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46788999999999999999995 57899999999765322 2356889999999999999999999988654 3
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCc
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 725 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 725 (809)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 4999999999999999842 34689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCc--ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 726 KLDEEDNT--HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 726 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 86543322 12234568999999999999999999999999999999999999997643
No 82
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.5e-34 Score=307.54 Aligned_cols=201 Identities=21% Similarity=0.293 Sum_probs=175.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|++++..+ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46788999999999999999995 578999999986432 345788999999999 79999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc-----eEEEecCCcc
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-----PKISDFGLAK 726 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~-----~kl~DfGla~ 726 (809)
|+ +++|.+++.. ...++++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++
T Consensus 87 ~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDL---CGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 9999999943 234589999999999999999999998 8999999999999987776 9999999998
Q ss_pred ccCCCCcc------eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 727 LDEEDNTH------ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 727 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 222 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 222 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence 76543221 1234579999999999999999999999999999999999999997744
No 83
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.5e-35 Score=334.92 Aligned_cols=204 Identities=26% Similarity=0.461 Sum_probs=178.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeC-CeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLAD-GKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
.++|...+.||+|+||.||+|.+.. ++.||||+++... ...++|.+|++++++++||||++++++|.+.+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4567788999999999999999764 8899999987543 3457899999999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
|++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 298 MTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp CTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred cCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 9999999999532 234689999999999999999999998 89999999999999999999999999998765443
Q ss_pred cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 733 THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
........+++.|+|||++.+..++.++|||||||++|||+| |+.||...+
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~ 424 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC
Confidence 333334456789999999999999999999999999999999 999997643
No 84
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.4e-34 Score=343.28 Aligned_cols=203 Identities=25% Similarity=0.365 Sum_probs=177.7
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEeccc---CcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSK---SKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~---~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~ 647 (809)
..++|+..+.||+|+||.||+|... +++.||||+++.. .....+.+..|.+++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568999999999999999999965 5889999998754 233456678899999988 7999999999999999999
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999999942 34689999999999999999999998 899999999999999999999999999986
Q ss_pred cCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 728 DEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 492 ~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~ 546 (674)
T 3pfq_A 492 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546 (674)
T ss_dssp CCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence 433222 2345689999999999999999999999999999999999999997643
No 85
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=8.6e-35 Score=318.97 Aligned_cols=199 Identities=28% Similarity=0.413 Sum_probs=160.6
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
..++|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4567889999999999999999975 57899999987543 34568889999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCceEEEecCCcccc
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFGLAKLD 728 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~DfGla~~~ 728 (809)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 129 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 129 LVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 9999999999843 34589999999999999999999998 8999999999999975 889999999999865
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 253 (349)
T 2w4o_A 202 EHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE 253 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCT
T ss_pred Cccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 4322 223457899999999999989999999999999999999999999653
No 86
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-34 Score=326.64 Aligned_cols=200 Identities=26% Similarity=0.450 Sum_probs=175.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357888999999999999999965 68999999986542 22345788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 95 ~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 95 MEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 999999999999943 34689999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
... .....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...
T Consensus 168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 219 (476)
T 2y94_A 168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219 (476)
T ss_dssp TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC
Confidence 432 2234579999999999988765 78999999999999999999999764
No 87
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.5e-34 Score=316.72 Aligned_cols=200 Identities=27% Similarity=0.366 Sum_probs=164.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
.++|+..+.||+|+||.||+++.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467889999999999999999965 68999999986543 3346788999999999999999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc--eEEEecCCccccCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN--PKISDFGLAKLDEE 730 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~--~kl~DfGla~~~~~ 730 (809)
+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~----~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 98 ASGGELYERIC----NAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 99999999883 234689999999999999999999998 8999999999999987765 99999999974332
Q ss_pred CCcceeccccccccccchhhhccCCCCch-HHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYLTDK-ADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-sDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. ......||+.|+|||++.+..++.+ +||||+||++|||++|+.||....
T Consensus 171 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 171 HS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred cC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 22 1234569999999999988777665 899999999999999999997643
No 88
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9e-35 Score=319.64 Aligned_cols=203 Identities=27% Similarity=0.365 Sum_probs=174.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEe----eCCeEEEEEEecccC----cccchhHHHHHHHHhhc-CCCceEeEEeEEEeCC
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL----ADGKVIAVKQLSSKS----KQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGN 644 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~----~~g~~vAVK~~~~~~----~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~ 644 (809)
.++|+..+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++.++ +||||+++++++.+.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36788999999999999999986 368999999986542 23345677899999999 6999999999999999
Q ss_pred eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCC
Q 043333 645 QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 724 (809)
Q Consensus 645 ~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 724 (809)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999999842 34689999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcceeccccccccccchhhhcc--CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMR--GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
++.............+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~ 266 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTT
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCC
Confidence 98664433333345679999999999985 347899999999999999999999997543
No 89
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.9e-34 Score=304.10 Aligned_cols=200 Identities=30% Similarity=0.545 Sum_probs=163.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCc----ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSK----QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~----~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|... ++.||||+++.... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999874 88999999865432 2246788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC--------CCceEEEe
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK--------DLNPKISD 721 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~--------~~~~kl~D 721 (809)
|||+++++|.+++. ...+++..+..++.|++.||+|||+++..+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999983 346899999999999999999999984334999999999999986 67899999
Q ss_pred cCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 722 FGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 722 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
||++........ ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 217 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI 217 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999986543322 2356899999999999999999999999999999999999999764
No 90
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.3e-34 Score=303.24 Aligned_cols=199 Identities=28% Similarity=0.463 Sum_probs=152.9
Q ss_pred cCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
++|+..+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999985 468999999987542 233457889999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+ +++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 6788887743 34589999999999999999999998 899999999999999999999999999986543
Q ss_pred CCcceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
... .....||+.|+|||.+.+..+ +.++||||+||++|||++|+.||....
T Consensus 165 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (275)
T 2eue_A 165 GNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 322 234568999999999987665 789999999999999999999997643
No 91
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=325.59 Aligned_cols=207 Identities=29% Similarity=0.415 Sum_probs=174.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEee------CCeEEEEEEeccc-CcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA------DGKVIAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 646 (809)
.++|+..+.||+|+||.||+|.+. +++.||||+++.. ......++.+|++++++++||||+++++++.+.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356888899999999999999843 4678999998654 233456788999999999999999999999999999
Q ss_pred EEEEEcccCCchhhhccCCC---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC---ceEEE
Q 043333 647 LLIYEYMENNSLARALFGPE---EHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL---NPKIS 720 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl~ 720 (809)
++||||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999995432 2234689999999999999999999998 899999999999999554 59999
Q ss_pred ecCCccccCCC-CcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 721 DFGLAKLDEED-NTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 721 DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
|||+++..... .........||+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~ 291 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999754221 1112233567899999999999999999999999999999998 999997643
No 92
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.6e-34 Score=312.01 Aligned_cols=193 Identities=26% Similarity=0.398 Sum_probs=151.0
Q ss_pred CCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcC-CCceEeEEeEEEeCCeEEEEEEcccCCc
Q 043333 580 DNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYEYMENNS 657 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~lV~ey~~~gs 657 (809)
.+.||+|+||.||+|... +++.||||++... ....+.+|++++..++ ||||+++++++.+.+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999965 6899999998643 3456788999999997 9999999999999999999999999999
Q ss_pred hhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC---ceEEEecCCccccCCCCcc
Q 043333 658 LARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL---NPKISDFGLAKLDEEDNTH 734 (809)
Q Consensus 658 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl~DfGla~~~~~~~~~ 734 (809)
|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++........
T Consensus 93 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 93 LFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp HHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 9999843 35689999999999999999999998 899999999999998765 8999999999865443222
Q ss_pred eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 735 ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 735 ~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 166 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 213 (325)
T 3kn6_A 166 -LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred -ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence 234568999999999999999999999999999999999999997643
No 93
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-35 Score=319.19 Aligned_cols=209 Identities=30% Similarity=0.476 Sum_probs=177.3
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEee------CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeCC
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLLA------DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEGN 644 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~ 644 (809)
...++|+..+.||+|+||.||+|... +++.||||+++.... ...+.|.+|++++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34678899999999999999999975 348899999975532 33567899999999999999999999999999
Q ss_pred eEEEEEEcccCCchhhhccCCCc--------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCC
Q 043333 645 QLLLIYEYMENNSLARALFGPEE--------------------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDI 704 (809)
Q Consensus 645 ~~~lV~ey~~~gsL~~~L~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dl 704 (809)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 99999999999999999854321 125789999999999999999999998 8999999
Q ss_pred CCCCEEEcCCCceEEEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 705 KATNVLLDKDLNPKISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 705 kp~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
||+||+++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999976543221 12233567889999999999999999999999999999999 99999764
Q ss_pred C
Q 043333 783 T 783 (809)
Q Consensus 783 ~ 783 (809)
.
T Consensus 281 ~ 281 (343)
T 1luf_A 281 A 281 (343)
T ss_dssp C
T ss_pred C
Confidence 3
No 94
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-34 Score=317.30 Aligned_cols=211 Identities=24% Similarity=0.311 Sum_probs=173.1
Q ss_pred HHHHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEeccc-----CcccchhHHHHHHHHhhcCCCceEeEEeEEEeC
Q 043333 570 IKAATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSK-----SKQGNREFVNEIGMISALQHPNLVKLYGCCIEG 643 (809)
Q Consensus 570 l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~-----~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~ 643 (809)
+....++|+..+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456788999999999999999999864 6789999998653 233456789999999999999999999999999
Q ss_pred CeEEEEEEcccCCchhhhccCCCc------------------------------------cCCCCCHHHHHHHHHHHHHH
Q 043333 644 NQLLLIYEYMENNSLARALFGPEE------------------------------------HRLKLDWPTRHSICIGLARG 687 (809)
Q Consensus 644 ~~~~lV~ey~~~gsL~~~L~~~~~------------------------------------~~~~l~~~~~~~i~~~ia~~ 687 (809)
+..++||||+++|+|.+++..... ....+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999998842100 01223567788899999999
Q ss_pred HHHHHhCCCCCeEEcCCCCCCEEEcCCC--ceEEEecCCccccCCCCc---ceeccccccccccchhhhcc--CCCCchH
Q 043333 688 LAYLHEESRLKIVHRDIKATNVLLDKDL--NPKISDFGLAKLDEEDNT---HISTRIAGTFGYMAPEYAMR--GYLTDKA 760 (809)
Q Consensus 688 L~yLH~~~~~~iiH~Dlkp~NILl~~~~--~~kl~DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~ks 760 (809)
|+|||+. +|+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999998 899999999999998776 899999999986533221 12234579999999999865 6789999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCC
Q 043333 761 DVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 761 DVwSlGvil~elltGk~P~~~~~ 783 (809)
|||||||++|||++|+.||....
T Consensus 258 DiwslG~il~el~~g~~pf~~~~ 280 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVN 280 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCC
Confidence 99999999999999999997643
No 95
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.8e-34 Score=313.28 Aligned_cols=208 Identities=27% Similarity=0.413 Sum_probs=174.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeC-------
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEG------- 643 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~------- 643 (809)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++.+.
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36788999999999999999996 4689999999865432 2345788999999999999999999999874
Q ss_pred -CeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEec
Q 043333 644 -NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 722 (809)
Q Consensus 644 -~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~Df 722 (809)
+..++||||+++ +|.+.+.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 468999999985 77777643 234589999999999999999999998 8999999999999999999999999
Q ss_pred CCccccCCCC---cceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCcccch
Q 043333 723 GLAKLDEEDN---THISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTKEAQF 788 (809)
Q Consensus 723 Gla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~~~~~ 788 (809)
|+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+..+..
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 238 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 238 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 9998654221 122234578999999999876 45799999999999999999999999876544433
No 96
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.9e-35 Score=309.56 Aligned_cols=203 Identities=28% Similarity=0.406 Sum_probs=162.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeC----CeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLAD----GKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~----g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
.++|+..+.||+|+||.||+|.... +..||||+..... ....+.+.+|++++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678889999999999999998642 4679999986543 233467899999999999999999999984 567899
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 93 IMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 9999999999999843 234689999999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~ 222 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC
Confidence 5433332334457789999999998999999999999999999997 999997643
No 97
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.4e-34 Score=304.48 Aligned_cols=201 Identities=23% Similarity=0.371 Sum_probs=176.8
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
..++|+..+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3467889999999999999999965 477899999977666667789999999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCceEEEecCCcccc
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 728 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~ 728 (809)
|+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999884 234589999999999999999999998 89999999999999 78899999999999866
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||....
T Consensus 160 ~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 211 (277)
T 3f3z_A 160 KPGKM--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT 211 (277)
T ss_dssp CTTSC--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCccc--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCC
Confidence 54322 234568999999998865 48999999999999999999999997643
No 98
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=327.98 Aligned_cols=303 Identities=19% Similarity=0.176 Sum_probs=261.0
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCch-hhcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPK-AVASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|++.+..|..|..+++|++|+|++|.+++..|..|..++ |+.|++++|.+..+|. .+.++++|++|+|++|.
T Consensus 36 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 115 (477)
T 2id5_A 36 LLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 115 (477)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSC
T ss_pred EEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCc
Confidence 478999999988888999999999999999999988888898886 9999999999999986 46889999999999999
Q ss_pred cccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCcc
Q 043333 79 FSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSG 158 (809)
Q Consensus 79 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 158 (809)
+++..+..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++.+..+..
T Consensus 116 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~ 195 (477)
T 2id5_A 116 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 195 (477)
T ss_dssp CCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTC
T ss_pred cccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhh
Confidence 99888888999999999999999999888888999999999999999999777777999999999999999999888888
Q ss_pred ccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCcc
Q 043333 159 IASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLT 237 (809)
Q Consensus 159 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~ 237 (809)
|..+++|+.|++++|......+.......+|+.|+|++|+++...+..|..+++|+.|+|++|++++.++..+.. ++|+
T Consensus 196 ~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 275 (477)
T 2id5_A 196 FKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ 275 (477)
T ss_dssp SCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCC
T ss_pred cccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCC
Confidence 999999999999998776655555555669999999999999877788999999999999999999988888876 9999
Q ss_pred EEEeeCccCCCCCChhhhh-ccCccccccCCccccCCCCCcccccccceeccccCCCCCCccccccccCCCCCCCcceee
Q 043333 238 YMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSEGSNSTGIVSCLKSFTCPTNHSSLHI 316 (809)
Q Consensus 238 ~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 316 (809)
.|+|++|++++..|..+.. .+++.|+|++|.++..++..+. .|.+.......+|||.|
T Consensus 276 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------------------~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 276 EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFH---------------------SVGNLETLILDSNPLAC 334 (477)
T ss_dssp EEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBS---------------------CGGGCCEEECCSSCEEC
T ss_pred EEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcC---------------------CCcccCEEEccCCCccC
Confidence 9999999999988877755 6779999999999876443332 34455566788999999
Q ss_pred cCCCceee
Q 043333 317 NCGGKQVI 324 (809)
Q Consensus 317 ~C~~~~~~ 324 (809)
+|.+.++.
T Consensus 335 ~c~~~~~~ 342 (477)
T 2id5_A 335 DCRLLWVF 342 (477)
T ss_dssp SGGGHHHH
T ss_pred ccchHhHH
Confidence 99877753
No 99
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9.5e-35 Score=315.72 Aligned_cols=203 Identities=29% Similarity=0.524 Sum_probs=167.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCe----EEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGK----VIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~----~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 647 (809)
.++|+..+.||+|+||+||+|++. +++ .||+|.+.... ....++|.+|++++++++||||++++++|.+.+ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 356888999999999999999854 344 46888876443 344578999999999999999999999998754 78
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+|+||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 99999999999999853 234689999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcc-eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 728 DEEDNTH-ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
....... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 224 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC
Confidence 6443322 2233456889999999999999999999999999999999 999997644
No 100
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=321.28 Aligned_cols=207 Identities=30% Similarity=0.444 Sum_probs=177.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee--------CCeEEEEEEecccCc-ccchhHHHHHHHHhhc-CCCceEeEEeEEEeC
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA--------DGKVIAVKQLSSKSK-QGNREFVNEIGMISAL-QHPNLVKLYGCCIEG 643 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~--------~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~ 643 (809)
.++|...+.||+|+||.||+|... .++.||||++..... ...+++.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467888999999999999999852 236799999976532 3346788999999999 899999999999999
Q ss_pred CeEEEEEEcccCCchhhhccCCCc------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043333 644 NQLLLIYEYMENNSLARALFGPEE------------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL 711 (809)
Q Consensus 644 ~~~~lV~ey~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl 711 (809)
+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 999999999999999999854321 124589999999999999999999998 89999999999999
Q ss_pred cCCCceEEEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 712 DKDLNPKISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 712 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
++++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~ 298 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999986643322 22334567889999999999999999999999999999999 999997643
No 101
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.6e-34 Score=320.00 Aligned_cols=206 Identities=19% Similarity=0.271 Sum_probs=176.4
Q ss_pred HhcCCCCCCeeccC--CCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEE
Q 043333 573 ATNNFAPDNKIGEG--GFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 573 ~~~~f~~~~~LG~G--~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 647 (809)
..++|++.+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 35678999999999 99999999965 68999999997543 223456788999999999999999999999999999
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.+..
T Consensus 103 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 999999999999998532 224589999999999999999999998 899999999999999999999999998864
Q ss_pred cCCCCc------ceeccccccccccchhhhcc--CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 728 DEEDNT------HISTRIAGTFGYMAPEYAMR--GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 422211 11123468999999999987 578999999999999999999999997643
No 102
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-34 Score=312.32 Aligned_cols=208 Identities=32% Similarity=0.481 Sum_probs=177.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEe------eCCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL------ADGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 646 (809)
.++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 56788899999999999999985 235789999987543 23346788999999999999999999999999999
Q ss_pred EEEEEcccCCchhhhccCCCc--------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCC
Q 043333 647 LLIYEYMENNSLARALFGPEE--------------------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKA 706 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp 706 (809)
++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999964322 123488999999999999999999998 899999999
Q ss_pred CCEEEcCCCceEEEecCCccccCCCCcc-eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCc
Q 043333 707 TNVLLDKDLNPKISDFGLAKLDEEDNTH-ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRTK 784 (809)
Q Consensus 707 ~NILl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~~ 784 (809)
+||++++++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999866443322 2223457789999999999889999999999999999999 9999976543
No 103
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.1e-34 Score=314.81 Aligned_cols=202 Identities=28% Similarity=0.466 Sum_probs=170.0
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCe----EEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGK----VIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~----~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
++|+..+.||+|+||.||+|.+. +++ .||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 56888899999999999999854 444 37888875443 334567889999999999999999999986 456899
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++... +..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 99999999999998542 34688899999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCcc-eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 729 EEDNTH-ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
...... ......+|..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 222 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC
Confidence 543322 2334567889999999999999999999999999999999 999997644
No 104
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-34 Score=307.90 Aligned_cols=204 Identities=27% Similarity=0.406 Sum_probs=172.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 357888999999999999999864 58899999987653 3345778999999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCceEEEecCCcccc
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 728 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~ 728 (809)
|+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999998854433446799999999999999999999998 89999999999999 45688999999999865
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... .....||+.|+|||.+. +.++.++|||||||++|||++|+.||....
T Consensus 178 ~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~ 229 (285)
T 3is5_A 178 KSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC
Confidence 43322 23456899999999875 568999999999999999999999997643
No 105
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=304.90 Aligned_cols=203 Identities=28% Similarity=0.461 Sum_probs=156.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35688899999999999999986 478999999986542 22246788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++++|.+++.. ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999853 234689999999999999999999998 89999999999999999999999999998654
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 164 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 216 (278)
T 3cok_A 164 MPHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT 216 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred CCCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChh
Confidence 32221 223568999999999998889999999999999999999999997643
No 106
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=314.46 Aligned_cols=200 Identities=24% Similarity=0.363 Sum_probs=174.9
Q ss_pred HhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCc--------ccchhHHHHHHHHhhcCCCceEeEEeEEEeC
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSK--------QGNREFVNEIGMISALQHPNLVKLYGCCIEG 643 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~--------~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~ 643 (809)
..++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456899999999999999999985 4689999999876431 1334678899999999999999999999999
Q ss_pred CeEEEEEEcccCC-chhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEec
Q 043333 644 NQLLLIYEYMENN-SLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 722 (809)
Q Consensus 644 ~~~~lV~ey~~~g-sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~Df 722 (809)
+..++||||+..| +|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999877 99998843 34689999999999999999999998 8999999999999999999999999
Q ss_pred CCccccCCCCcceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 723 GLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 723 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
|++........ .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 175 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 175 GSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp TTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred ccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 99987654332 234569999999999988776 8899999999999999999999964
No 107
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.3e-34 Score=305.11 Aligned_cols=201 Identities=29% Similarity=0.497 Sum_probs=173.1
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
+.++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3567889999999999999999865 57799999986532 2234678899999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999883 234689999999999999999999998 8999999999999999999999999998654
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 211 (279)
T 3fdn_A 160 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred Cccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence 3322 234568999999999999999999999999999999999999997644
No 108
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=8.9e-35 Score=330.12 Aligned_cols=204 Identities=31% Similarity=0.513 Sum_probs=170.7
Q ss_pred HhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
..++|+..+.||+|+||.||+|.+.++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 346678889999999999999998888889999997543 335679999999999999999999999876 678999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 260 ~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 260 MSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 9999999999431 234589999999999999999999998 89999999999999999999999999998765433
Q ss_pred cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 733 THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
........++..|+|||.+.++.++.++|||||||++|||++ |+.||....
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~ 386 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC
Confidence 222233456789999999999999999999999999999999 999997643
No 109
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4e-34 Score=307.92 Aligned_cols=201 Identities=30% Similarity=0.486 Sum_probs=166.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|...+.||+|+||.||+|... ..+|||+++... ....+.|.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357888999999999999999864 358899886543 233467899999999999999999999875 456889999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999853 344689999999999999999999998 8999999999999999999999999999865432
Q ss_pred -Ccceeccccccccccchhhhc---cCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 732 -NTHISTRIAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 732 -~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~ 241 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC
Confidence 122233457999999999986 5678999999999999999999999997643
No 110
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1e-34 Score=305.44 Aligned_cols=202 Identities=30% Similarity=0.521 Sum_probs=177.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYM 653 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~ 653 (809)
.++|+..+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 356788899999999999999988889999999976433 3467899999999999999999999999999999999999
Q ss_pred cCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc
Q 043333 654 ENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 733 (809)
Q Consensus 654 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 733 (809)
++++|.+++.. ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 86 EHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp TTCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHhh---CcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 99999999843 234689999999999999999999998 899999999999999999999999999986543222
Q ss_pred ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 209 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 209 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC
Confidence 22233457788999999998899999999999999999999 89999764
No 111
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.7e-34 Score=307.61 Aligned_cols=203 Identities=26% Similarity=0.381 Sum_probs=170.6
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc--cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ--GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~--~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
++|+..+.||+|+||+||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999965 5899999998654322 24567899999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999988742 34589999999999999999999998 8999999999999999999999999999876533
Q ss_pred Ccceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCcc
Q 043333 732 NTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTKE 785 (809)
Q Consensus 732 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~~ 785 (809)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 209 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV 209 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 22 2234568999999999876 67899999999999999999999999775443
No 112
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-34 Score=319.35 Aligned_cols=210 Identities=27% Similarity=0.359 Sum_probs=180.0
Q ss_pred CccHHHHHHHhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcC-----CCceEeEE
Q 043333 564 SFTLRQIKAATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-----HPNLVKLY 637 (809)
Q Consensus 564 ~~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-----H~nIv~l~ 637 (809)
.+++++.....++|...+.||+|+||+||+|+. .+++.||||+++.. ....+.+..|+++++.++ ||||++++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 344455555678999999999999999999996 46889999998643 233456778999999986 99999999
Q ss_pred eEEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC----
Q 043333 638 GCCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK---- 713 (809)
Q Consensus 638 ~~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~---- 713 (809)
+++...+..++||||+ +++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCC
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccc
Confidence 9999999999999999 89999998532 223589999999999999999999998 8999999999999975
Q ss_pred ---------------------CCceEEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHH
Q 043333 714 ---------------------DLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEI 772 (809)
Q Consensus 714 ---------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~el 772 (809)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 7899999999998654322 245789999999999999999999999999999999
Q ss_pred HcCCCCCCCCCc
Q 043333 773 VSGRSNVICRTK 784 (809)
Q Consensus 773 ltGk~P~~~~~~ 784 (809)
++|+.||...+.
T Consensus 253 l~g~~pf~~~~~ 264 (360)
T 3llt_A 253 YTGSLLFRTHEH 264 (360)
T ss_dssp HHSSCSCCCSSH
T ss_pred HHCCCCCCCCcH
Confidence 999999977543
No 113
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.9e-34 Score=309.96 Aligned_cols=201 Identities=26% Similarity=0.367 Sum_probs=176.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc------cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ------GNREFVNEIGMISALQHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 646 (809)
.++|+..+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456889999999999999999965 6899999998754322 245689999999999999999999999999999
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC----ceEEEec
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISDF 722 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kl~Df 722 (809)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999943 34689999999999999999999998 899999999999999887 7999999
Q ss_pred CCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 723 GLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 723 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
|++........ .....||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 164 g~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 222 (321)
T 2a2a_A 164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222 (321)
T ss_dssp TTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred ccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC
Confidence 99987654322 234568999999999999999999999999999999999999997643
No 114
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.9e-34 Score=318.23 Aligned_cols=202 Identities=20% Similarity=0.273 Sum_probs=167.3
Q ss_pred HhcCCCCCCeeccCCCccEEEeEeeC------CeEEEEEEecccCcc-----------cchhHHHHHHHHhhcCCCceEe
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLAD------GKVIAVKQLSSKSKQ-----------GNREFVNEIGMISALQHPNLVK 635 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vAVK~~~~~~~~-----------~~~~f~~Ei~~l~~l~H~nIv~ 635 (809)
..++|...+.||+|+||.||+|.+.+ ++.||||++...... ....+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34678899999999999999998754 478999998654321 1123445666777888999999
Q ss_pred EEeEEEeC----CeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043333 636 LYGCCIEG----NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL 711 (809)
Q Consensus 636 l~~~~~~~----~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl 711 (809)
+++++... ...++||||+ +++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99999874 4589999999 9999999843 235699999999999999999999998 89999999999999
Q ss_pred c--CCCceEEEecCCccccCCCCcc------eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 712 D--KDLNPKISDFGLAKLDEEDNTH------ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 712 ~--~~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
+ .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 9 8899999999999765432211 11234599999999999999999999999999999999999999975
No 115
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.5e-34 Score=324.17 Aligned_cols=198 Identities=32% Similarity=0.464 Sum_probs=171.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCC-eEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGN-QLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~-~~~lV~ey 652 (809)
.++|+..+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 456788899999999999999875 7899999997543 4578999999999999999999999998765 78999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
|++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 269 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343 (450)
T ss_dssp CTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence 9999999999532 223478999999999999999999998 89999999999999999999999999998543221
Q ss_pred cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 733 THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
....+++.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 344 ----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~ 391 (450)
T 1k9a_A 344 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred ----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 12356889999999999999999999999999999998 999997643
No 116
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=309.66 Aligned_cols=198 Identities=28% Similarity=0.334 Sum_probs=164.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc--ccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK--QGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..++||+|+||+||+|... +|+.||||++..... ....++..|+..+.++ +||||++++++|.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357889999999999999999975 689999999865432 2233455666666555 899999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+ +++|.+++.. ....++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 136 ~e~~-~~~L~~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 136 TELC-GPSLQQHCEA---WGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EECC-CCBHHHHHHH---HCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred Eecc-CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 9999 6789888743 234699999999999999999999998 89999999999999999999999999998664
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
... ......||+.|+|||++.+ .++.++|||||||++|||++|+.|+..
T Consensus 209 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~ 257 (311)
T 3p1a_A 209 TAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG 257 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred cCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 332 2234569999999998875 789999999999999999999776643
No 117
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=7.9e-34 Score=301.57 Aligned_cols=200 Identities=24% Similarity=0.406 Sum_probs=175.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578899999999999999999864 58899999986543 223466889999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc---eEEEecCCccc
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDFGLAKL 727 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~DfGla~~ 727 (809)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999988884 234689999999999999999999998 8999999999999986655 99999999976
Q ss_pred cCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 728 DEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 728 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
...... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...
T Consensus 158 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 210 (284)
T 3kk8_A 158 VNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210 (284)
T ss_dssp CCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC
Confidence 654322 23457899999999999999999999999999999999999999664
No 118
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=313.41 Aligned_cols=199 Identities=26% Similarity=0.396 Sum_probs=166.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccC--cccchhHHHHHHHHhhcCC--CceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQH--PNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H--~nIv~l~~~~~~~~~~~lV 649 (809)
.++|++.+.||+|+||.||++...+++.||||++.... ....+.+.+|++++.+++| |||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45688899999999999999998889999999986543 2234678899999999986 9999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|| +.+|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLK----KKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 56889999984 344689999999999999999999998 899999999999997 5789999999998765
Q ss_pred CCCcc-eeccccccccccchhhhcc-----------CCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 730 EDNTH-ISTRIAGTFGYMAPEYAMR-----------GYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 730 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
..... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 43322 2334679999999999865 6789999999999999999999999965
No 119
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-34 Score=314.00 Aligned_cols=208 Identities=30% Similarity=0.438 Sum_probs=175.4
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee------CCeEEEEEEecccC-cccchhHHHHHHHHhhc-CCCceEeEEeEEEeCC
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA------DGKVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGN 644 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~ 644 (809)
..++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 3467888999999999999999852 35689999997543 33457799999999999 8999999999999999
Q ss_pred eEEEEEEcccCCchhhhccCCCcc-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCC
Q 043333 645 QLLLIYEYMENNSLARALFGPEEH-------------------RLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIK 705 (809)
Q Consensus 645 ~~~lV~ey~~~gsL~~~L~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlk 705 (809)
..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||++ +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999653221 13489999999999999999999998 89999999
Q ss_pred CCCEEEcCCCceEEEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 706 ATNVLLDKDLNPKISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 706 p~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
|+||+++.++.+||+|||++........ .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999986544332 22334567889999999999999999999999999999998 999997643
No 120
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.8e-34 Score=307.14 Aligned_cols=205 Identities=27% Similarity=0.457 Sum_probs=180.4
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
..++|+..+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4567888999999999999999975 48899999986543 335678999999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 90 FMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp CCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred cCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 99999999998532 234689999999999999999999998 8999999999999999999999999999877655
Q ss_pred CcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 732 NTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 732 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...+
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~ 217 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 4444445567889999999999999999999999999999999 999997643
No 121
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.1e-34 Score=313.42 Aligned_cols=198 Identities=23% Similarity=0.390 Sum_probs=170.7
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
..++|+..+.||+|+||.||+|... +|+.||||++.... ..+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3567899999999999999999965 68999999986543 2345788888888 7999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC----CceEEEecCCcc
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD----LNPKISDFGLAK 726 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~----~~~kl~DfGla~ 726 (809)
||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+.++ +.+||+|||+++
T Consensus 96 E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 96 ELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp CCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999998843 34689999999999999999999998 89999999999998543 359999999998
Q ss_pred ccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
........ ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 169 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 223 (342)
T 2qr7_A 169 QLRAENGL-LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223 (342)
T ss_dssp ECBCTTCC-BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred cCcCCCCc-eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCC
Confidence 76543322 23457899999999998878899999999999999999999999764
No 122
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.1e-34 Score=327.71 Aligned_cols=199 Identities=25% Similarity=0.369 Sum_probs=166.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEeccc--CcccchhHHHHHHHHhhcCCCceEeEEeEEEeC------C
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLYGCCIEG------N 644 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~------~ 644 (809)
.++|+..+.||+|+||+||+|... +|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468899999999999999999854 6899999999754 223356788999999999999999999999754 4
Q ss_pred eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCC
Q 043333 645 QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 724 (809)
Q Consensus 645 ~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 724 (809)
..++|||||+++ |.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSEE-HHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCCC-HHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 679999999864 666552 2488999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
++...... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.
T Consensus 211 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~ 268 (464)
T 3ttj_A 211 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 268 (464)
T ss_dssp C-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred eeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 98654322 23456799999999999999999999999999999999999999987543
No 123
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.8e-34 Score=309.00 Aligned_cols=203 Identities=23% Similarity=0.360 Sum_probs=169.0
Q ss_pred hcCCCCC-CeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEEE
Q 043333 574 TNNFAPD-NKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 574 ~~~f~~~-~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.+.|.+. +.||+|+||.||+|.. .+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567664 7899999999999985 46899999999766555567889999999985 7999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc---eEEEecCCccc
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDFGLAKL 727 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~DfGla~~ 727 (809)
||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||++..
T Consensus 91 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999843 34689999999999999999999998 8999999999999998776 99999999875
Q ss_pred cCCCCc------ceeccccccccccchhhhcc-----CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 728 DEEDNT------HISTRIAGTFGYMAPEYAMR-----GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
...... ......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 230 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence 532211 11223468999999999875 457889999999999999999999997643
No 124
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.2e-34 Score=302.59 Aligned_cols=200 Identities=26% Similarity=0.444 Sum_probs=175.6
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357888999999999999999965 57899999986542 22346788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999999842 34689999999999999999999998 89999999999999999999999999987654
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence 322 224568999999999999899999999999999999999999997643
No 125
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.9e-34 Score=314.54 Aligned_cols=196 Identities=32% Similarity=0.526 Sum_probs=171.0
Q ss_pred cCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcc---cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQ---GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~---~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
+.|+..+.||+|+||.||+|.. .+|+.||||++...... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4577889999999999999995 57899999998654322 2356889999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||++ |+|.+++.. ....+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 134 e~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9997 688887732 345689999999999999999999998 899999999999999999999999999986543
Q ss_pred CCcceeccccccccccchhhhc---cCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
. ....||+.|+|||++. .+.++.++|||||||++|||++|+.||...
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 256 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 256 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2 2356899999999984 567899999999999999999999999654
No 126
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.2e-34 Score=310.62 Aligned_cols=219 Identities=23% Similarity=0.367 Sum_probs=179.3
Q ss_pred ccCCCCCccHHHHHHHhcCCCCC-CeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcC-CCc
Q 043333 558 LDLHTGSFTLRQIKAATNNFAPD-NKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQ-HPN 632 (809)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~f~~~-~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~-H~n 632 (809)
.+...+...++......++|... +.||+|+||.||+|... +++.||||++.... .....++.+|++++..++ |||
T Consensus 11 ~~~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 90 (327)
T 3lm5_A 11 VDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR 90 (327)
T ss_dssp -----CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTT
T ss_pred ccccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCC
Confidence 33334444455556677778877 88999999999999865 58999999987543 233567889999999995 699
Q ss_pred eEeEEeEEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc
Q 043333 633 LVKLYGCCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD 712 (809)
Q Consensus 633 Iv~l~~~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~ 712 (809)
|+++++++.+.+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 91 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~ 165 (327)
T 3lm5_A 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLS 165 (327)
T ss_dssp BCCEEEEEECSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEES
T ss_pred EEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEe
Confidence 999999999999999999999999999998432 235689999999999999999999998 899999999999999
Q ss_pred C---CCceEEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 713 K---DLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 713 ~---~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
. ++.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 166 ~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 166 SIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp CBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCCCcEEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 8 78999999999987643322 234579999999999999999999999999999999999999997643
No 127
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-34 Score=313.00 Aligned_cols=204 Identities=27% Similarity=0.405 Sum_probs=168.3
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc-----ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCe
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-----QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQ 645 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-----~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 645 (809)
...++|+..+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999964 589999999865322 123568899999999999999999999999999
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCc
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 725 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 725 (809)
.++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CEEEEECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eEEEEEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 9999999986 88888843 234578889999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 726 KLDEEDNTHISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 726 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
+....... ......||+.|+|||++.+. .++.++|||||||++|||++|++||...+
T Consensus 160 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~ 217 (346)
T 1ua2_A 160 KSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS 217 (346)
T ss_dssp STTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC
Confidence 87643322 22345789999999998764 58999999999999999999999997654
No 128
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.5e-34 Score=301.93 Aligned_cols=198 Identities=32% Similarity=0.589 Sum_probs=169.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCccc-------chhHHHHHHHHhhcCCCceEeEEeEEEeCCe
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQG-------NREFVNEIGMISALQHPNLVKLYGCCIEGNQ 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~-------~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 645 (809)
.++|+..+.||+|+||.||+|+. .+++.||||++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46788899999999999999996 468999999986543322 267889999999999999999999987655
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCEEEcCCCc-----eE
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLK--IVHRDIKATNVLLDKDLN-----PK 718 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiH~Dlkp~NILl~~~~~-----~k 718 (809)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 699999999999998854 334689999999999999999999998 6 999999999999988776 99
Q ss_pred EEecCCccccCCCCcceeccccccccccchhhh--ccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 719 ISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYA--MRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 719 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
|+|||+++.... ......||+.|+|||.+ ....++.++|||||||++|||++|+.||....
T Consensus 170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 232 (287)
T 4f0f_A 170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232 (287)
T ss_dssp ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 999999975432 22345789999999998 34567899999999999999999999997643
No 129
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4e-34 Score=303.15 Aligned_cols=203 Identities=34% Similarity=0.536 Sum_probs=176.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYM 653 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~ 653 (809)
.++|+..+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 46788899999999999999998888899999986543 33567899999999999999999999986 45689999999
Q ss_pred cCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc
Q 043333 654 ENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 733 (809)
Q Consensus 654 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 733 (809)
++++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||++........
T Consensus 90 ~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 90 ENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp TTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 999999998432 223689999999999999999999998 899999999999999999999999999987655433
Q ss_pred ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 215 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC
Confidence 33334557889999999998889999999999999999999 999997643
No 130
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.2e-34 Score=345.21 Aligned_cols=276 Identities=31% Similarity=0.449 Sum_probs=247.9
Q ss_pred CccccCCCCCccCCccCCC--CCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCC-CCchhhcCCccCcEEeecc
Q 043333 1 HRILKSQNLPGRLPPELTR--LPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANG-AIPKAVASISTLADLTLEF 76 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~--l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~-~ip~~l~~l~~L~~L~L~~ 76 (809)
+|+|++|++.+.+|+.+.. +++|++|+|++|.+++.+|..+..++ |+.|++++|.+. .+|..+..+++|+.|+|++
T Consensus 372 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 451 (768)
T 3rgz_A 372 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451 (768)
T ss_dssp EEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred EEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCC
Confidence 4788999999999988877 88999999999999988999888886 889999988885 6788999999999999999
Q ss_pred cccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCC
Q 043333 77 NQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIP 156 (809)
Q Consensus 77 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 156 (809)
|.+++.+|..+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++.+|..++++++|+.|+|++|++++.+|
T Consensus 452 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 531 (768)
T 3rgz_A 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531 (768)
T ss_dssp SCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECC
T ss_pred CcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCEEeccCCCCCCCCC--------------------------------------------------------
Q 043333 157 SGIASLVELTDLRISDLNGPEGPF-------------------------------------------------------- 180 (809)
Q Consensus 157 ~~~~~l~~L~~L~l~~n~l~~~~~-------------------------------------------------------- 180 (809)
..+..+++|+.|++++|.+....+
T Consensus 532 ~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 611 (768)
T 3rgz_A 532 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 611 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTC
T ss_pred HHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccc
Confidence 999999999999999987762211
Q ss_pred --------------ccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCcc
Q 043333 181 --------------PRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNL 245 (809)
Q Consensus 181 --------------~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~ 245 (809)
..+.++++|+.|+|++|++++.+|..|+++++|+.|+|++|+++|.+|..+.. ++|+.|||++|+
T Consensus 612 ~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp CSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred ccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 13455788999999999999999999999999999999999999999998887 999999999999
Q ss_pred CCCCCChhhhh-ccCccccccCCccccCCCCC
Q 043333 246 LTGPVPDWIVR-KRNKHIDLSYNNFIDGSSDS 276 (809)
Q Consensus 246 l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~ 276 (809)
++|.+|..+.. ..++.|||++|++++.+|..
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 99999998876 46799999999999988754
No 131
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.2e-34 Score=311.81 Aligned_cols=203 Identities=25% Similarity=0.384 Sum_probs=165.2
Q ss_pred HhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
..++|+..+.||+|+||+||+|.. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 346788999999999999999985 4689999999865432 2245678999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-----CCCceEEEecCC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD-----KDLNPKISDFGL 724 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~-----~~~~~kl~DfGl 724 (809)
|||++ |+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++ +++.+||+|||+
T Consensus 112 ~e~~~-~~L~~~~~----~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAE-NDLKKYMD----KNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCS-EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCC-CCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 99998 59999884 234589999999999999999999998 899999999999994 555699999999
Q ss_pred ccccCCCCcceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 184 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 243 (329)
T 3gbz_A 184 ARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH
Confidence 986643322 22345689999999999874 589999999999999999999999976543
No 132
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.3e-34 Score=344.45 Aligned_cols=316 Identities=26% Similarity=0.327 Sum_probs=278.2
Q ss_pred CccccCCCCCccCCccCCCCC-CCCEEEccCCCCCCCCCcccCC--C-CccccccccccCC-CCchhhcCCccCcEEeec
Q 043333 1 HRILKSQNLPGRLPPELTRLP-FLQEIDLTRNYLNGTIPSEWAS--L-PLVNLPLWKQANG-AIPKAVASISTLADLTLE 75 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~-~L~~L~Ls~n~l~~~~p~~~~~--l-~L~~L~l~~n~~~-~ip~~l~~l~~L~~L~L~ 75 (809)
+|+|++|++.+.+|..+..++ +|++|+|++|.+++.+|..+.. + .|+.|++++|.+. .+|..+.++++|+.|+|+
T Consensus 347 ~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 426 (768)
T 3rgz_A 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426 (768)
T ss_dssp EEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECC
T ss_pred EEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECc
Confidence 478999999999999999887 9999999999999999988876 4 3999999999886 789999999999999999
Q ss_pred ccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCC
Q 043333 76 FNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPI 155 (809)
Q Consensus 76 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 155 (809)
+|++++.+|..|+++++|++|+|++|++++.+|..+..+++|+.|+|++|++++.+|..+.++++|+.|+|++|++++.+
T Consensus 427 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 506 (768)
T 3rgz_A 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506 (768)
T ss_dssp SSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred CCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhh---------------------------
Q 043333 156 PSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLG--------------------------- 208 (809)
Q Consensus 156 p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--------------------------- 208 (809)
|..++.+++|+.|++++|++....+..+.++++|+.|+|++|++.+.+|..+.
T Consensus 507 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (768)
T 3rgz_A 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 586 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTT
T ss_pred ChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccc
Confidence 99999999999999999999988888999999999999999999988886543
Q ss_pred -------------------------------------------ccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCc
Q 043333 209 -------------------------------------------QMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGN 244 (809)
Q Consensus 209 -------------------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N 244 (809)
.+++|+.|||++|+++|.+|..+.. ++|+.|+|++|
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N 666 (768)
T 3rgz_A 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 666 (768)
T ss_dssp CCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCC
Confidence 3577999999999999999998887 99999999999
Q ss_pred cCCCCCChhhhh-ccCccccccCCccccCCCCCcccccccceeccccCCCCCCcccccc---ccCCCCCCCcceeec
Q 043333 245 LLTGPVPDWIVR-KRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSEGSNSTGIVSCL---KSFTCPTNHSSLHIN 317 (809)
Q Consensus 245 ~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~---~~~~~~~~~~~~~~~ 317 (809)
+++|.+|..+.. ..++.|||++|++++.+|..+.....+..+..+.+. ..+.+|.-. ........+||+-|.
T Consensus 667 ~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~-l~g~iP~~~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 667 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN-LSGPIPEMGQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE-EEEECCSSSSGGGSCGGGGCSCTEEES
T ss_pred ccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc-ccccCCCchhhccCCHHHhcCCchhcC
Confidence 999999998876 567999999999999999988877777666554432 222222211 112233557777764
No 133
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=8.9e-34 Score=316.61 Aligned_cols=197 Identities=22% Similarity=0.305 Sum_probs=161.7
Q ss_pred cCCCCC-CeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhh-cCCCceEeEEeEEEe----CCeEE
Q 043333 575 NNFAPD-NKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISA-LQHPNLVKLYGCCIE----GNQLL 647 (809)
Q Consensus 575 ~~f~~~-~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~-l~H~nIv~l~~~~~~----~~~~~ 647 (809)
++|... +.||+|+||+||+|... +|+.||||++.. ...+.+|++++.+ .+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456555 68999999999999864 688999999853 2457788888744 589999999999876 56789
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCceEEEecCC
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFGL 724 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~DfGl 724 (809)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 136 lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccc
Confidence 999999999999999543 234689999999999999999999998 8999999999999997 78999999999
Q ss_pred ccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
++...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 211 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 267 (400)
T 1nxk_A 211 AKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267 (400)
T ss_dssp CEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCT
T ss_pred ccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 98654322 2234678999999999999999999999999999999999999997643
No 134
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.8e-34 Score=317.15 Aligned_cols=198 Identities=26% Similarity=0.391 Sum_probs=167.1
Q ss_pred cCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccC--cccchhHHHHHHHHhhcC--CCceEeEEeEEEeCCeEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQ--HPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~lV~ 650 (809)
++|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4588899999999999999998779999999986543 233467899999999996 599999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
| +.+++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 678899999843 34688999999999999999999998 899999999999996 57899999999987654
Q ss_pred CCcc-eeccccccccccchhhhcc-----------CCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 731 DNTH-ISTRIAGTFGYMAPEYAMR-----------GYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 731 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
.... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 3222 2334679999999999865 4689999999999999999999999965
No 135
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.6e-34 Score=310.31 Aligned_cols=208 Identities=25% Similarity=0.439 Sum_probs=161.1
Q ss_pred HhcCCCCCCeeccCCCccEEEeEeeC-Ce---EEEEEEeccc--CcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLAD-GK---VIAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~---~vAVK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 646 (809)
..++|+..+.||+|+||.||+|.... ++ .||||+++.. .....+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45689999999999999999998653 32 7999998754 233457789999999999999999999999887665
Q ss_pred ------EEEEEcccCCchhhhccCCC--ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceE
Q 043333 647 ------LLIYEYMENNSLARALFGPE--EHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPK 718 (809)
Q Consensus 647 ------~lV~ey~~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 718 (809)
++||||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 99999999999999885322 2333689999999999999999999998 899999999999999999999
Q ss_pred EEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 719 ISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 719 l~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
|+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 999999986543322 12223456789999999999999999999999999999999 999997643
No 136
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.1e-33 Score=298.89 Aligned_cols=204 Identities=32% Similarity=0.460 Sum_probs=176.2
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
..++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3467888999999999999999965 68999999986543 233467889999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 85 EYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp ECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 99999999999843 34589999999999999999999998 899999999999999999999999999976543
Q ss_pred CCc-ceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNT-HISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
... .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 212 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence 221 12234578999999999987664 779999999999999999999997643
No 137
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.1e-34 Score=320.04 Aligned_cols=201 Identities=26% Similarity=0.412 Sum_probs=163.9
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--------cccchhHHHHHHHHhhcCCCceEeEEeEEEe
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--------KQGNREFVNEIGMISALQHPNLVKLYGCCIE 642 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--------~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~ 642 (809)
...++|...+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 35678999999999999999999864 57899999986532 122346889999999999999999999975
Q ss_pred CCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC---ceEE
Q 043333 643 GNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL---NPKI 719 (809)
Q Consensus 643 ~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl 719 (809)
.+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred cCceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 5568999999999999998843 34689999999999999999999998 899999999999997544 5999
Q ss_pred EecCCccccCCCCcceeccccccccccchhhhcc---CCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 720 SDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMR---GYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 720 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
+|||+++...... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 284 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~ 347 (419)
T 3i6u_A 284 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred eecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 9999998765322 2334679999999999853 67788999999999999999999999753
No 138
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-33 Score=302.19 Aligned_cols=202 Identities=26% Similarity=0.399 Sum_probs=176.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467888999999999999999965 57899999986542 22345688999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++++|.+++. ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999873 234689999999999999999999998 89999999999999999999999999998664
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 167 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 219 (294)
T 2rku_A 167 YDGER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219 (294)
T ss_dssp STTCC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cCccc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 33222 234568999999999998889999999999999999999999997643
No 139
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-33 Score=300.41 Aligned_cols=200 Identities=27% Similarity=0.403 Sum_probs=172.9
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc------cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ------GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 647 (809)
++|+..+.||+|+||.||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56888999999999999999965 6899999998654221 2467899999999999999999999999999999
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC----ceEEEecC
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISDFG 723 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kl~DfG 723 (809)
+||||+++++|.+++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999983 234689999999999999999999998 899999999999998877 89999999
Q ss_pred CccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 724 LAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 724 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
++........ .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 215 (283)
T 3bhy_A 158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET 215 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc
Confidence 9986643322 234568999999999998999999999999999999999999997643
No 140
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.3e-34 Score=307.26 Aligned_cols=202 Identities=24% Similarity=0.317 Sum_probs=165.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc---cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ---GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~---~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999964 6899999998754322 236788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999842 34689999999999999999999998 89999999999999999999999999997665
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
...........||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 43333333456899999999999989999999999999999999999999763
No 141
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6e-34 Score=316.43 Aligned_cols=204 Identities=26% Similarity=0.361 Sum_probs=168.9
Q ss_pred HHHhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeC------
Q 043333 571 KAATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEG------ 643 (809)
Q Consensus 571 ~~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~------ 643 (809)
....++|+..+.||+|+||.||+|.. .+|+.||||++.... +...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999985 568999999986442 2234799999999999999999998543
Q ss_pred --------------------------------CeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHH
Q 043333 644 --------------------------------NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYL 691 (809)
Q Consensus 644 --------------------------------~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yL 691 (809)
...++||||++ |+|.+.+.........+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34889999998 588877754333456799999999999999999999
Q ss_pred HhCCCCCeEEcCCCCCCEEEc-CCCceEEEecCCccccCCCCcceeccccccccccchhhhccC-CCCchHHHHHHHHHH
Q 043333 692 HEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVA 769 (809)
Q Consensus 692 H~~~~~~iiH~Dlkp~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil 769 (809)
|+. +|+||||||+|||++ +++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||++
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 998 899999999999998 689999999999986644332 2345689999999998764 489999999999999
Q ss_pred HHHHcCCCCCCCCCc
Q 043333 770 LEIVSGRSNVICRTK 784 (809)
Q Consensus 770 ~elltGk~P~~~~~~ 784 (809)
|||++|+.||...+.
T Consensus 233 ~ell~g~~pf~~~~~ 247 (383)
T 3eb0_A 233 GELILGKPLFSGETS 247 (383)
T ss_dssp HHHHHSSCSSCCSSH
T ss_pred HHHHhCCCCCCCCCh
Confidence 999999999987543
No 142
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.4e-34 Score=304.15 Aligned_cols=200 Identities=30% Similarity=0.461 Sum_probs=171.1
Q ss_pred cCCCCCCeeccCCCccEEEeEe-----eCCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeC--CeE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLL-----ADGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEG--NQL 646 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~--~~~ 646 (809)
++|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++.+. +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4577889999999999999983 358899999997543 33456789999999999999999999999876 668
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 999999999999999843 334689999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCc--ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 043333 727 LDEEDNT--HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVI 780 (809)
Q Consensus 727 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~ 780 (809)
....... .......||..|+|||.+.+..++.++||||+||++|||++|+.|+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 7654432 12234567888999999999999999999999999999999999874
No 143
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.1e-34 Score=306.77 Aligned_cols=195 Identities=25% Similarity=0.427 Sum_probs=169.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeC-C-------eEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCe
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLAD-G-------KVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQ 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g-------~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 645 (809)
.++|...+.||+|+||.||+|.... + +.||+|++........+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578888999999999999998542 3 5799999977666666789999999999999999999999999999
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc--------e
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN--------P 717 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~--------~ 717 (809)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +
T Consensus 87 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CEEEEECCTTCBHHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CEEEEECCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccccee
Confidence 9999999999999999943 233489999999999999999999998 8999999999999998887 9
Q ss_pred EEEecCCccccCCCCcceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCC
Q 043333 718 KISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNV 779 (809)
Q Consensus 718 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~ 779 (809)
||+|||++...... ....||+.|+|||.+.+ ..++.++|||||||++|||++|..|+
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 99999998754321 23457889999999987 77899999999999999999965544
No 144
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-33 Score=308.52 Aligned_cols=202 Identities=26% Similarity=0.399 Sum_probs=176.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|...+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356888899999999999999965 57899999986542 22346688999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 120 ~e~~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999873 234689999999999999999999998 89999999999999999999999999998664
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 245 (335)
T 2owb_A 193 YDGER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245 (335)
T ss_dssp STTCC-BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cCccc-ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC
Confidence 33222 234568999999999999889999999999999999999999997643
No 145
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.4e-34 Score=303.27 Aligned_cols=204 Identities=27% Similarity=0.412 Sum_probs=170.4
Q ss_pred HhcCCCCCCeeccCCCccEEEeEeeC----CeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLAD----GKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~~----g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 647 (809)
..++|...+.||+|+||.||+|...+ +..||||++.... ....+.|.+|++++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 35678889999999999999998643 3469999987653 3345678999999999999999999999865 4568
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+||||+++++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 89 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 99999999999999843 334689999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 728 DEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.............+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~ 219 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC
Confidence 65433333334557889999999998999999999999999999998 999997543
No 146
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4e-34 Score=308.23 Aligned_cols=207 Identities=30% Similarity=0.456 Sum_probs=177.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEe------eCCeEEEEEEecccCc-ccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCe
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL------ADGKVIAVKQLSSKSK-QGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQ 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 645 (809)
.++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788899999999999999984 2467899999975533 2346789999999999 89999999999999999
Q ss_pred EEEEEEcccCCchhhhccCCCc--------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043333 646 LLLIYEYMENNSLARALFGPEE--------------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL 711 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~--------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl 711 (809)
.++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 9999999999999999854321 123589999999999999999999998 89999999999999
Q ss_pred cCCCceEEEecCCccccCCCCcc-eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 712 DKDLNPKISDFGLAKLDEEDNTH-ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 712 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
+.++.+||+|||++......... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 99999999999999876544322 2233457889999999999999999999999999999999 999997643
No 147
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=7.1e-34 Score=309.75 Aligned_cols=207 Identities=29% Similarity=0.458 Sum_probs=175.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEe--------eCCeEEEEEEecccCc-ccchhHHHHHHHHhhc-CCCceEeEEeEEEeC
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL--------ADGKVIAVKQLSSKSK-QGNREFVNEIGMISAL-QHPNLVKLYGCCIEG 643 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~--------~~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~ 643 (809)
.++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 56788899999999999999985 3467899999875432 3346788999999999 899999999999999
Q ss_pred CeEEEEEEcccCCchhhhccCCCc------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043333 644 NQLLLIYEYMENNSLARALFGPEE------------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL 711 (809)
Q Consensus 644 ~~~~lV~ey~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl 711 (809)
+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 999999999999999999965432 123489999999999999999999998 89999999999999
Q ss_pred cCCCceEEEecCCccccCCCCcc-eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 712 DKDLNPKISDFGLAKLDEEDNTH-ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 712 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 264 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence 99999999999999866543321 2223457789999999998889999999999999999999 999997643
No 148
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.7e-33 Score=302.13 Aligned_cols=200 Identities=34% Similarity=0.499 Sum_probs=176.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.+.|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 456888999999999999999854 68899999986553 3345778999999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++++|.+++. ..++++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999983 34689999999999999999999998 8999999999999999999999999999866443
Q ss_pred CcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 732 NTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 732 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
.. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 173 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 222 (303)
T 3a7i_A 173 QI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222 (303)
T ss_dssp BC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc
Confidence 22 123456899999999999999999999999999999999999999764
No 149
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.5e-34 Score=323.90 Aligned_cols=193 Identities=25% Similarity=0.422 Sum_probs=153.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeC-----Ce
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEG-----NQ 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~-----~~ 645 (809)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... +.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999854 68999999986542 22346788999999999999999999999543 56
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCc
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 725 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 725 (809)
.++||||++ |+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||++
T Consensus 132 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 899999985 68999884 334689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCc--------------------------ceeccccccccccchhhh-ccCCCCchHHHHHHHHHHHHHHc
Q 043333 726 KLDEEDNT--------------------------HISTRIAGTFGYMAPEYA-MRGYLTDKADVYSFGIVALEIVS 774 (809)
Q Consensus 726 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~ksDVwSlGvil~ellt 774 (809)
+....... ......+||+.|+|||++ ....++.++|||||||++|||++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 86542211 122345789999999986 45679999999999999999999
No 150
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.2e-34 Score=333.60 Aligned_cols=203 Identities=32% Similarity=0.516 Sum_probs=175.3
Q ss_pred HhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEc
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
..++|+..+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++||||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 356778889999999999999998888889999997543 335679999999999999999999999876 678999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
|++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 343 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 343 MSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 9999999999431 234589999999999999999999998 89999999999999999999999999998654322
Q ss_pred cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 733 THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
........++..|+|||++.++.++.++|||||||++|||++ |+.||...
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 112223456789999999999999999999999999999999 99999764
No 151
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.2e-34 Score=298.82 Aligned_cols=199 Identities=23% Similarity=0.341 Sum_probs=169.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeC--CeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEG--NQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~--~~~~lV 649 (809)
.++|...+.||+|+||.||+|+.. ++.||||++.... ....+.|.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357888999999999999999974 8899999987553 23346789999999999999999999999887 778999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ .+++||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 9999999999999542 2336899999999999999999999972 139999999999999999999999998875432
Q ss_pred CCCcceeccccccccccchhhhccCCCCc---hHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTD---KADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---ksDVwSlGvil~elltGk~P~~~~ 782 (809)
. ....||+.|+|||.+.+...+. ++|||||||++|||++|+.||...
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 214 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 2 2346889999999998755444 899999999999999999999764
No 152
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-33 Score=300.24 Aligned_cols=202 Identities=29% Similarity=0.478 Sum_probs=172.1
Q ss_pred cCCCCCC-eeccCCCccEEEeEee---CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 575 NNFAPDN-KIGEGGFGPVYKGLLA---DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 575 ~~f~~~~-~LG~G~fG~Vy~~~~~---~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
++|...+ .||+|+||.||+|.+. +++.||||+++... ....+++.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4455555 8999999999999853 57889999997653 23456789999999999999999999999 55678999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 999999999999843 344689999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcce--eccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 730 EDNTHI--STRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
...... .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 218 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 433221 123456889999999998889999999999999999999 999997643
No 153
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6e-34 Score=317.84 Aligned_cols=203 Identities=25% Similarity=0.348 Sum_probs=173.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCC--eEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGN--QLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~--~~~lV 649 (809)
.++|...+.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 457888999999999999999965 48999999997543 233567889999999999999999999998765 78999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----cCCCceEEEecCCc
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL----DKDLNPKISDFGLA 725 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kl~DfGla 725 (809)
|||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 99999999999995432 233489999999999999999999998 89999999999999 77788999999999
Q ss_pred cccCCCCcceeccccccccccchhhhcc--------CCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 726 KLDEEDNTHISTRIAGTFGYMAPEYAMR--------GYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 726 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~ 226 (396)
T 4eut_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (396)
T ss_dssp EECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred eEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 8764332 2234579999999999865 56788999999999999999999999653
No 154
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-34 Score=314.55 Aligned_cols=198 Identities=24% Similarity=0.409 Sum_probs=165.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCC------
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGN------ 644 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~------ 644 (809)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46788899999999999999996 468999999986542 223466889999999999999999999998653
Q ss_pred eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCC
Q 043333 645 QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 724 (809)
Q Consensus 645 ~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 724 (809)
..++||||+ +++|.+++. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMK-----HEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 789999883 24689999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
++..... ....++|+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 231 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH 231 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9875432 234578999999999877 6789999999999999999999999987543
No 155
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-33 Score=301.00 Aligned_cols=201 Identities=32% Similarity=0.527 Sum_probs=160.5
Q ss_pred HhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
..++|+..+.||+|+||+||+|+.. ..||||+++.... ...+.|.+|++++++++||||+++++++ ..+..++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3567888999999999999999864 3599999865432 3346789999999999999999999965 456789999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 99 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 99 QWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp ECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999999853 334689999999999999999999998 899999999999999999999999999976543
Q ss_pred CC-cceeccccccccccchhhhc---cCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 731 DN-THISTRIAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 731 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
.. ........||+.|+|||.+. +..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 228 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcccc
Confidence 21 22223456899999999986 567889999999999999999999999764
No 156
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.3e-33 Score=309.59 Aligned_cols=207 Identities=24% Similarity=0.424 Sum_probs=178.1
Q ss_pred HHHHHHHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc--------cchhHHHHHHHHhhc-CCCceEeE
Q 043333 567 LRQIKAATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ--------GNREFVNEIGMISAL-QHPNLVKL 636 (809)
Q Consensus 567 ~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~--------~~~~f~~Ei~~l~~l-~H~nIv~l 636 (809)
........++|...+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++.++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3344556678999999999999999999975 6899999998654321 134578899999999 79999999
Q ss_pred EeEEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc
Q 043333 637 YGCCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN 716 (809)
Q Consensus 637 ~~~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 716 (809)
++++...+..++||||+++|+|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLT----EKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 999999999999999999999999984 234689999999999999999999998 8999999999999999999
Q ss_pred eEEEecCCccccCCCCcceeccccccccccchhhhcc------CCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 717 PKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMR------GYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 717 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 239 ikl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 308 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR 308 (365)
T ss_dssp EEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC
Confidence 99999999987654322 234679999999999863 35788999999999999999999999764
No 157
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.2e-33 Score=298.42 Aligned_cols=202 Identities=25% Similarity=0.321 Sum_probs=168.5
Q ss_pred HhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEE-EeCCeEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCC-IEGNQLLLIY 650 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~-~~~~~~~lV~ 650 (809)
..++|+..+.||+|+||.||+|.. .+++.||||++..... .+++.+|+++++.++|++++..++++ .+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999995 5789999998754432 35688999999999988877666555 5678889999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCceEEEecCCccc
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKL 727 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~ 727 (809)
||+ +|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||+ ++++.+||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 85 ELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Ecc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999 9999999842 234689999999999999999999998 89999999999999 7889999999999987
Q ss_pred cCCCCc------ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 728 DEEDNT------HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence 654322 11234578999999999999999999999999999999999999997643
No 158
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1e-33 Score=311.86 Aligned_cols=209 Identities=26% Similarity=0.422 Sum_probs=171.7
Q ss_pred cHHHHHHHhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCccc-----------chhHHHHHHHHhhcCCCceE
Q 043333 566 TLRQIKAATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQG-----------NREFVNEIGMISALQHPNLV 634 (809)
Q Consensus 566 ~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~-----------~~~f~~Ei~~l~~l~H~nIv 634 (809)
...++....++|...+.||+|+||.||+|...+|+.||||++....... .+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3567778889999999999999999999998789999999986542221 26788999999999999999
Q ss_pred eEEeEEEeC-----CeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCE
Q 043333 635 KLYGCCIEG-----NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNV 709 (809)
Q Consensus 635 ~l~~~~~~~-----~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NI 709 (809)
++++++... ...++||||++ |+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999999653 36899999998 688888853 344689999999999999999999998 899999999999
Q ss_pred EEcCCCceEEEecCCccccCCCCcceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 710 LLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 710 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
+++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred EEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999997544322 2234578999999999877 678999999999999999999999997754
No 159
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=8.8e-34 Score=304.61 Aligned_cols=200 Identities=25% Similarity=0.414 Sum_probs=173.4
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
..++|...+.||+|+||.||+|... +|+.||||++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3467889999999999999999964 689999999976554455678899999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCceEEEecCCcccc
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 728 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~ 728 (809)
|+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 87 LVSGGELFDRIL----ERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred cCCCccHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 999999999883 234689999999999999999999998 89999999999999 78899999999998754
Q ss_pred CCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||...
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 210 (304)
T 2jam_A 160 QNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210 (304)
T ss_dssp CCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 322 122356899999999999999999999999999999999999999764
No 160
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-33 Score=324.18 Aligned_cols=200 Identities=30% Similarity=0.467 Sum_probs=175.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467888999999999999999965 68999999986542 23456789999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCceEEEecCCcc
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAK 726 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~ 726 (809)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999998843 34689999999999999999999998 89999999999999 567899999999998
Q ss_pred ccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
....... ....+||+.|+|||++.+ .++.++||||+||++|||++|+.||...+
T Consensus 178 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 231 (484)
T 3nyv_A 178 HFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 231 (484)
T ss_dssp HBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Ecccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC
Confidence 7654332 234579999999999866 68999999999999999999999997643
No 161
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.8e-33 Score=322.72 Aligned_cols=201 Identities=27% Similarity=0.441 Sum_probs=173.4
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
..++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3467899999999999999999965 68999999986542 33456789999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc---CCCceEEEecCCcc
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD---KDLNPKISDFGLAK 726 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~---~~~~~kl~DfGla~ 726 (809)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999998842 34689999999999999999999998 899999999999995 45679999999998
Q ss_pred ccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
...... .....+||+.|+|||++.+ .++.++||||+||++|||++|+.||...+
T Consensus 173 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 226 (486)
T 3mwu_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (486)
T ss_dssp TBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 664332 2234579999999999875 58999999999999999999999997643
No 162
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=309.96 Aligned_cols=200 Identities=21% Similarity=0.274 Sum_probs=164.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEee----CCeEEEEEEecccCcc-----------cchhHHHHHHHHhhcCCCceEeEEe
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA----DGKVIAVKQLSSKSKQ-----------GNREFVNEIGMISALQHPNLVKLYG 638 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~~~-----------~~~~f~~Ei~~l~~l~H~nIv~l~~ 638 (809)
.++|...+.||+|+||.||+|... .+..||||+....... ..+.+.+|+..+..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 356888999999999999999965 5678999998654321 2234677888999999999999999
Q ss_pred EEEe----CCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC
Q 043333 639 CCIE----GNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD 714 (809)
Q Consensus 639 ~~~~----~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~ 714 (809)
++.+ .+..++||||+ +++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9998 67899999999 9999999843 22789999999999999999999998 89999999999999988
Q ss_pred C--ceEEEecCCccccCCCCc------ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 715 L--NPKISDFGLAKLDEEDNT------HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 715 ~--~~kl~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
+ .+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 7 999999999986543211 111345799999999999999999999999999999999999999965
No 163
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.4e-34 Score=303.53 Aligned_cols=209 Identities=29% Similarity=0.461 Sum_probs=174.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEe--CCeEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIE--GNQLLL 648 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~--~~~~~l 648 (809)
.++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+ .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467888999999999999999965 68999999986543 2334678899999999999999999998865 568899
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEES--RLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
||||+++|+|.+++.........+++..+..++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||++.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999654444556999999999999999999999982 0129999999999999999999999999998
Q ss_pred ccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 220 (279)
T 2w5a_A 165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220 (279)
T ss_dssp HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence 6644322 1223568999999999999899999999999999999999999997643
No 164
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-33 Score=319.37 Aligned_cols=198 Identities=26% Similarity=0.411 Sum_probs=166.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeC-----Ce
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEG-----NQ 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~-----~~ 645 (809)
.++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468899999999999999999864 58899999997542 22346788999999999999999999999876 57
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCc
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 725 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 725 (809)
.++||||++ |+|.+++.. ...+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999987 599998843 34689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCc---------------------ceeccccccccccchhhh-ccCCCCchHHHHHHHHHHHHHHcCCCCC
Q 043333 726 KLDEEDNT---------------------HISTRIAGTFGYMAPEYA-MRGYLTDKADVYSFGIVALEIVSGRSNV 779 (809)
Q Consensus 726 ~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~ksDVwSlGvil~elltGk~P~ 779 (809)
+....... ......+||+.|+|||++ ....++.++||||+||++|||++|..||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 87643221 112456799999999986 5567999999999999999999865554
No 165
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7.2e-34 Score=323.02 Aligned_cols=320 Identities=18% Similarity=0.154 Sum_probs=186.1
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCC-CcccCCCC-ccccccccccCCCC-chhhcCCccCcEEeeccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTI-PSEWASLP-LVNLPLWKQANGAI-PKAVASISTLADLTLEFN 77 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~-L~~L~l~~n~~~~i-p~~l~~l~~L~~L~L~~N 77 (809)
+|+|++|++.+..|..|.++++|++|+|++|.+.+.+ +..|..++ |+.|++++|.+..+ |..+.++++|++|+|++|
T Consensus 34 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 113 (455)
T 3v47_A 34 YVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQC 113 (455)
T ss_dssp EEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTS
T ss_pred EEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCC
Confidence 3678888888777788888888888888888876444 45677765 78888888877766 667788888888888888
Q ss_pred ccccCCCcc--ccCCCCCCEEEccCCccCccCchh-hhcccccceeeeecccccCcCchhhhcc--cccceEecccCcCC
Q 043333 78 QFSGDLPAE--LGNLINLEKLHLNSNNFTGKLPES-FANLTRLKHFRISDNHFTGQIPDYIQNW--TKLEKLFIEGSGLA 152 (809)
Q Consensus 78 ~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~ 152 (809)
++++..+.. |.++++|++|+|++|++++..|.. +.++++|++|+|++|++++..|..+..+ .+|+.|++++|.+.
T Consensus 114 ~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~ 193 (455)
T 3v47_A 114 NLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQ 193 (455)
T ss_dssp CCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCT
T ss_pred CCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCccc
Confidence 887644444 777888888888888888776665 7778888888888888887777666655 23333333333333
Q ss_pred CCCCcc--------ccCCCCCCEEeccCCCCCCCCCcc-------------------------------------cc--C
Q 043333 153 GPIPSG--------IASLVELTDLRISDLNGPEGPFPR-------------------------------------LS--N 185 (809)
Q Consensus 153 ~~~p~~--------~~~l~~L~~L~l~~n~l~~~~~~~-------------------------------------l~--~ 185 (809)
+..+.. +..+++|+.|++++|.+....+.. +. .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (455)
T 3v47_A 194 DMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLE 273 (455)
T ss_dssp TCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGT
T ss_pred ccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccccccc
Confidence 222111 112234444444444332211000 00 1
Q ss_pred CcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCcccc
Q 043333 186 LKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHID 263 (809)
Q Consensus 186 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~ 263 (809)
.++|+.|+|++|++.+..|..|..+++|+.|+|++|++++.+|..+.. ++|+.|+|++|.+++..|..+.. .+++.|+
T Consensus 274 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 274 ASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp TSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred ccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 134555555555555555555555555555555555555554544443 55555555555555444444432 3445555
Q ss_pred ccCCccccCCCCCcccccccceeccccCCCC---CCccccccccCCCCCCCcceeecCCC
Q 043333 264 LSYNNFIDGSSDSNCENQSVNLFASSSEGSN---STGIVSCLKSFTCPTNHSSLHINCGG 320 (809)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~c~~~~~~~~~~~~~~~~C~~ 320 (809)
|++|+++...+..+.....+..+..+.+... ......+++.......+|+|.|+|..
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 5555555444444443333333322222111 11122445566677889999999974
No 166
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.4e-33 Score=322.23 Aligned_cols=200 Identities=29% Similarity=0.459 Sum_probs=169.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||++++++|.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456888999999999999999965 68899999987553 334567899999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC---CceEEEecCCccc
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD---LNPKISDFGLAKL 727 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kl~DfGla~~ 727 (809)
||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.. +.+||+|||++..
T Consensus 116 e~~~~g~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEII----HRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999998883 334689999999999999999999998 89999999999999764 5599999999987
Q ss_pred cCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 728 DEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..... .....+||+.|+|||++. +.++.++||||+||++|||++|+.||...+
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 241 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT 241 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 65432 223467999999999886 568999999999999999999999997644
No 167
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.3e-33 Score=307.27 Aligned_cols=202 Identities=24% Similarity=0.423 Sum_probs=170.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc--cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ--GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~--~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.++|+..+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357888999999999999999965 5899999998654322 2455789999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999988763 234589999999999999999999998 899999999999999999999999999976543
Q ss_pred CCcceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 177 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 229 (331)
T 4aaa_A 177 PGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS 229 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred Ccc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 322 22345689999999999875 78999999999999999999999997754
No 168
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=332.19 Aligned_cols=195 Identities=29% Similarity=0.473 Sum_probs=164.8
Q ss_pred eeccCCCccEEEeEee---CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcccCCc
Q 043333 582 KIGEGGFGPVYKGLLA---DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNS 657 (809)
Q Consensus 582 ~LG~G~fG~Vy~~~~~---~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~~~gs 657 (809)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|++++++++||||++++++|.+ +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 45679999997653 3345789999999999999999999999976 56899999999999
Q ss_pred hhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCcce--
Q 043333 658 LARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHI-- 735 (809)
Q Consensus 658 L~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~-- 735 (809)
|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.........
T Consensus 422 L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 9999954 244689999999999999999999998 89999999999999999999999999998764332221
Q ss_pred eccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 736 STRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 736 ~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||...+
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~ 544 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 122345689999999999999999999999999999998 999997643
No 169
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.8e-33 Score=296.43 Aligned_cols=201 Identities=30% Similarity=0.433 Sum_probs=170.3
Q ss_pred CCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEccc
Q 043333 576 NFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYME 654 (809)
Q Consensus 576 ~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~~ 654 (809)
+|.....||+|+||.||+|.. .+++.||||++........+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455566999999999999995 4688999999977665556789999999999999999999999999999999999999
Q ss_pred CCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC-CCceEEEecCCccccCCCCc
Q 043333 655 NNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK-DLNPKISDFGLAKLDEEDNT 733 (809)
Q Consensus 655 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfGla~~~~~~~~ 733 (809)
+++|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 103 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999985321 234567899999999999999999998 8999999999999997 89999999999986543222
Q ss_pred ceeccccccccccchhhhccCC--CCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGY--LTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~--~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
......||+.|+|||++.+.. ++.++||||||+++|||++|+.||..
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 123456899999999987643 78999999999999999999999965
No 170
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-33 Score=303.91 Aligned_cols=204 Identities=27% Similarity=0.454 Sum_probs=165.3
Q ss_pred cCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 5688899999999999999985 468999999987532 223466889999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+++|+|.+++.........+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999854333455689999999999999999999998 899999999999999999999999999986543
Q ss_pred CCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 239 (310)
T 2wqm_A 189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 322 122356899999999999999999999999999999999999999653
No 171
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.3e-33 Score=299.97 Aligned_cols=200 Identities=24% Similarity=0.365 Sum_probs=171.4
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~l 648 (809)
..++|+..+.||+|+||.||+|... +++.||||++.... .....++.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3567889999999999999999965 68999999987542 23356788899999999 89999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC--------------
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD-------------- 714 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~-------------- 714 (809)
||||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999954333335789999999999999999999998 89999999999999844
Q ss_pred -----CceEEEecCCccccCCCCcceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHcCCCCCC
Q 043333 715 -----LNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNVI 780 (809)
Q Consensus 715 -----~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~elltGk~P~~ 780 (809)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++|||||||++|||++|++|+.
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 232 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 479999999998765432 23589999999999765 56689999999999999999998764
No 172
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.9e-34 Score=308.82 Aligned_cols=202 Identities=30% Similarity=0.456 Sum_probs=175.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-----eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEe--CCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-----ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIE--GNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~--~~~~ 646 (809)
.++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. .+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35788899999999999999984 3588999999987665556779999999999999999999999874 5668
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 102 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEECCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEeecCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccce
Confidence 999999999999999843 234589999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcc--eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 727 LDEEDNTH--ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 727 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 76543322 22334578889999999998899999999999999999999999854
No 173
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.8e-33 Score=304.38 Aligned_cols=197 Identities=31% Similarity=0.470 Sum_probs=170.3
Q ss_pred CCCCCeeccCCCccEEEeEee-----CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeC--CeEEE
Q 043333 577 FAPDNKIGEGGFGPVYKGLLA-----DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEG--NQLLL 648 (809)
Q Consensus 577 f~~~~~LG~G~fG~Vy~~~~~-----~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~--~~~~l 648 (809)
|+..+.||+|+||+||++.+. +++.||||++..... ...+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 378899999999999888642 578999999976532 3356789999999999999999999999984 67899
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~-----~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLP-----RHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGG-----GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999999999993 33489999999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCcc--eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 729 EEDNTH--ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 729 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
...... ......+|..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 544321 22335678889999999998999999999999999999999999965
No 174
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.5e-33 Score=299.99 Aligned_cols=202 Identities=30% Similarity=0.483 Sum_probs=171.4
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999965 68999999986543 2234678899999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|++ |+|.+++... ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 998 6999988432 224588999999999999999999998 8999999999999999999999999999765432
Q ss_pred CcceeccccccccccchhhhccCC-CCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 732 NTHISTRIAGTFGYMAPEYAMRGY-LTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 732 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. ......+|+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 208 (299)
T 2r3i_A 157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208 (299)
T ss_dssp SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 21 123356899999999988755 7999999999999999999999997754
No 175
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.6e-33 Score=297.37 Aligned_cols=201 Identities=25% Similarity=0.325 Sum_probs=171.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEE-EeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCC-IEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~-~~~~~~~lV~e 651 (809)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|+++++.++|++++..+.++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 56889999999999999999995 578999999986543 245788999999999988876655555 56778899999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCceEEEecCCcccc
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 728 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~ 728 (809)
|+ +++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||++...
T Consensus 86 ~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 86 LL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ec-CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99 8999999842 234689999999999999999999998 89999999999999 58899999999999876
Q ss_pred CCCCcc------eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 729 EEDNTH------ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 729 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcC
Confidence 543321 1234579999999999999999999999999999999999999997643
No 176
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=302.37 Aligned_cols=198 Identities=34% Similarity=0.540 Sum_probs=163.9
Q ss_pred cCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEccc
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYME 654 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~~ 654 (809)
++|+..+.||+|+||.||+|.+. ++.||||++... ...+.|.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 56778899999999999999874 788999998643 33567899999999999999999999886 44789999999
Q ss_pred CCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc-eEEEecCCccccCCCCc
Q 043333 655 NNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-PKISDFGLAKLDEEDNT 733 (809)
Q Consensus 655 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~-~kl~DfGla~~~~~~~~ 733 (809)
+|+|.+++.... ....+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++.......
T Consensus 83 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~- 160 (307)
T 2eva_A 83 GGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM- 160 (307)
T ss_dssp TCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc-
Confidence 999999996532 2235788999999999999999999943338999999999999998886 7999999997553321
Q ss_pred ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 161 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 206 (307)
T 2eva_A 161 ---TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred ---ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence 2346899999999999999999999999999999999999999753
No 177
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.6e-33 Score=306.76 Aligned_cols=203 Identities=23% Similarity=0.371 Sum_probs=175.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCccc---c--------------hhHHHHHHHHhhcCCCceEeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQG---N--------------REFVNEIGMISALQHPNLVKL 636 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~---~--------------~~f~~Ei~~l~~l~H~nIv~l 636 (809)
.++|...+.||+|+||.||+|.. +|+.||||++....... . +.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888999999999999999998 89999999986542211 1 778999999999999999999
Q ss_pred EeEEEeCCeEEEEEEcccCCchhhhccC----CCccCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEcCCCCCCEEE
Q 043333 637 YGCCIEGNQLLLIYEYMENNSLARALFG----PEEHRLKLDWPTRHSICIGLARGLAYLHE-ESRLKIVHRDIKATNVLL 711 (809)
Q Consensus 637 ~~~~~~~~~~~lV~ey~~~gsL~~~L~~----~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiH~Dlkp~NILl 711 (809)
++++.+.+..++||||+++|+|.+++.. .......+++..+..++.|++.||+|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999998321 11124678999999999999999999998 7 89999999999999
Q ss_pred cCCCceEEEecCCccccCCCCcceeccccccccccchhhhccC-CCCc-hHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 712 DKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRG-YLTD-KADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 712 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
+.++.+||+|||++...... ......||+.|+|||.+.+. .++. ++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999865433 23346789999999999877 5666 9999999999999999999997643
No 178
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.5e-33 Score=297.40 Aligned_cols=197 Identities=27% Similarity=0.474 Sum_probs=172.1
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEe---------
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIE--------- 642 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~--------- 642 (809)
..++|+..+.||+|+||.||+|... +++.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567889999999999999999975 78999999986542 467889999999999999999999865
Q ss_pred -------CCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC
Q 043333 643 -------GNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL 715 (809)
Q Consensus 643 -------~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~ 715 (809)
....++||||+++|+|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 34579999999999999999532 234689999999999999999999998 899999999999999999
Q ss_pred ceEEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 043333 716 NPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVI 780 (809)
Q Consensus 716 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~ 780 (809)
.+||+|||++........ .....||+.|+|||.+.+..++.++|||||||++|||++|+.|+.
T Consensus 160 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp EEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred CEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 999999999987654322 234568999999999999999999999999999999999998874
No 179
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-34 Score=321.83 Aligned_cols=200 Identities=15% Similarity=0.181 Sum_probs=163.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEeccc---CcccchhHHHHH---HHHhhcCCCceEeEE-------eE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSK---SKQGNREFVNEI---GMISALQHPNLVKLY-------GC 639 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~---~~~~~~~f~~Ei---~~l~~l~H~nIv~l~-------~~ 639 (809)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.|.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788889999999999999995 56899999998743 223356788999 555666899999998 66
Q ss_pred EEeCCe-----------------EEEEEEcccCCchhhhccCCC---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 043333 640 CIEGNQ-----------------LLLIYEYMENNSLARALFGPE---EHRLKLDWPTRHSICIGLARGLAYLHEESRLKI 699 (809)
Q Consensus 640 ~~~~~~-----------------~~lV~ey~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 699 (809)
+.+.+. .++||||+ +|+|.+++.... .....+++..+..++.|++.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 665532 78999999 689999985321 1122345788899999999999999998 89
Q ss_pred EEcCCCCCCEEEcCCCceEEEecCCccccCCCCcceeccccccccccchhhhccC-----------CCCchHHHHHHHHH
Q 043333 700 VHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRG-----------YLTDKADVYSFGIV 768 (809)
Q Consensus 700 iH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~ksDVwSlGvi 768 (809)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985332 2234567 999999999887 89999999999999
Q ss_pred HHHHHcCCCCCCCC
Q 043333 769 ALEIVSGRSNVICR 782 (809)
Q Consensus 769 l~elltGk~P~~~~ 782 (809)
+|||++|+.||...
T Consensus 303 l~elltg~~Pf~~~ 316 (377)
T 3byv_A 303 IYWIWCADLPITKD 316 (377)
T ss_dssp HHHHHHSSCCC---
T ss_pred HHHHHHCCCCCccc
Confidence 99999999999653
No 180
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.9e-34 Score=310.85 Aligned_cols=211 Identities=27% Similarity=0.423 Sum_probs=178.4
Q ss_pred HHHHHhcCCCCCCeeccCCCccEEEeEee------CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEE
Q 043333 569 QIKAATNNFAPDNKIGEGGFGPVYKGLLA------DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCI 641 (809)
Q Consensus 569 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~ 641 (809)
+.....++|...+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 34456788999999999999999999854 367899999875432 23456889999999999999999999999
Q ss_pred eCCeEEEEEEcccCCchhhhccCCCc------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC
Q 043333 642 EGNQLLLIYEYMENNSLARALFGPEE------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL 715 (809)
Q Consensus 642 ~~~~~~lV~ey~~~gsL~~~L~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~ 715 (809)
+.+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 99999999999999999999853211 124578999999999999999999998 899999999999999999
Q ss_pred ceEEEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 716 NPKISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 716 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 999999999976543221 11223457889999999999999999999999999999999 89999764
No 181
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6e-34 Score=307.24 Aligned_cols=216 Identities=27% Similarity=0.412 Sum_probs=180.7
Q ss_pred ccHHHHHHHhcCCCCCCeeccCCCccEEEeEe------eCCeEEEEEEecccCc-ccchhHHHHHHHHhhc-CCCceEeE
Q 043333 565 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGLL------ADGKVIAVKQLSSKSK-QGNREFVNEIGMISAL-QHPNLVKL 636 (809)
Q Consensus 565 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l 636 (809)
+.........++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34445555678899999999999999999974 2468899999976533 2345788999999999 79999999
Q ss_pred EeEEEeCC-eEEEEEEcccCCchhhhccCCCcc------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcC
Q 043333 637 YGCCIEGN-QLLLIYEYMENNSLARALFGPEEH------------RLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRD 703 (809)
Q Consensus 637 ~~~~~~~~-~~~lV~ey~~~gsL~~~L~~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~D 703 (809)
++++...+ ..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99998765 489999999999999999654321 22378999999999999999999998 899999
Q ss_pred CCCCCEEEcCCCceEEEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCC
Q 043333 704 IKATNVLLDKDLNPKISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVIC 781 (809)
Q Consensus 704 lkp~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~ 781 (809)
|||+||+++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999986644332 22334567889999999999999999999999999999998 9999976
Q ss_pred CC
Q 043333 782 RT 783 (809)
Q Consensus 782 ~~ 783 (809)
..
T Consensus 254 ~~ 255 (316)
T 2xir_A 254 VK 255 (316)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 182
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.3e-34 Score=313.45 Aligned_cols=201 Identities=25% Similarity=0.425 Sum_probs=174.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 457889999999999999999965 68999999987653 2335678999999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999842 346899999999999999999999842 6999999999999999999999999999754321
Q ss_pred CcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 732 NTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 732 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1224578999999999999999999999999999999999999997643
No 183
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.3e-33 Score=317.38 Aligned_cols=200 Identities=29% Similarity=0.386 Sum_probs=165.4
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeC----C--eEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEG----N--QLL 647 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~----~--~~~ 647 (809)
.+|+..+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++++++||||+++++++... + ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46788899999999999999975 58999999986432 2334799999999999999999998652 2 367
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC-CceEEEecCCcc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD-LNPKISDFGLAK 726 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kl~DfGla~ 726 (809)
+||||+++ +|.+.+.........+++..+..++.|+++||+|||++ +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999986 66665533223456799999999999999999999998 89999999999999965 678999999998
Q ss_pred ccCCCCcceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+.
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~ 262 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 7643322 2345789999999998764 789999999999999999999999987543
No 184
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.1e-33 Score=305.06 Aligned_cols=203 Identities=32% Similarity=0.489 Sum_probs=170.7
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeE--EEEEEeccc-CcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKV--IAVKQLSSK-SKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~--vAVK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV 649 (809)
++|+..+.||+|+||.||+|+.. ++.. ||||++... .....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999964 5664 499988654 333456789999999999 899999999999999999999
Q ss_pred EEcccCCchhhhccCCC------------ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCce
Q 043333 650 YEYMENNSLARALFGPE------------EHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNP 717 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 717 (809)
|||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999996543 2335789999999999999999999998 89999999999999999999
Q ss_pred EEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 718 KISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 718 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
||+|||+++...... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 245 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence 999999987432211 1123456789999999998889999999999999999998 99999764
No 185
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=306.55 Aligned_cols=203 Identities=29% Similarity=0.521 Sum_probs=165.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCe----EEEEEEeccc-CcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGK----VIAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~----~vAVK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 647 (809)
.++|+..+.||+|+||.||+|... +++ .||+|.+... .....+++.+|++++++++||||+++++++.+.. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367888999999999999999854 444 3577777544 3344677999999999999999999999998765 78
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+|+||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 99999999999999843 234689999999999999999999998 899999999999999999999999999986
Q ss_pred cCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 728 DEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
...... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 224 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 643322 12223456788999999999999999999999999999999 999997644
No 186
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.5e-33 Score=297.72 Aligned_cols=198 Identities=30% Similarity=0.481 Sum_probs=168.2
Q ss_pred cCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEe----CCeEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIE----GNQLL 647 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~----~~~~~ 647 (809)
+.|...+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34677788999999999999864 57899999986542 3335678899999999999999999999876 35689
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCCceEEEecCCcc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAK 726 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kl~DfGla~ 726 (809)
+||||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ .+|+||||||+||+++ +++.+||+|||++.
T Consensus 106 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEecCCCCHHHHHH----HccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 9999999999999993 2346899999999999999999999982 1399999999999998 78999999999997
Q ss_pred ccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
...... .....||+.|+|||++. +.++.++||||+||++|||++|+.||..
T Consensus 181 ~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 181 LKRASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp GCCTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 654332 22456899999999876 4589999999999999999999999965
No 187
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-33 Score=302.08 Aligned_cols=208 Identities=29% Similarity=0.425 Sum_probs=169.1
Q ss_pred ccHHHHHHHhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhc--CCCceEeEEeEEEe
Q 043333 565 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISAL--QHPNLVKLYGCCIE 642 (809)
Q Consensus 565 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l--~H~nIv~l~~~~~~ 642 (809)
..........++|+..+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++... +||||+++++++.+
T Consensus 27 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 102 (337)
T 3mdy_A 27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIK 102 (337)
T ss_dssp SCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred CCcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence 334444456688999999999999999999875 8999999985432 34455666666655 89999999999998
Q ss_pred C----CeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEcCCCCCCEEEcC
Q 043333 643 G----NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEES-----RLKIVHRDIKATNVLLDK 713 (809)
Q Consensus 643 ~----~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiH~Dlkp~NILl~~ 713 (809)
. ...++||||+++|+|.+++. ...+++..+..++.|++.||+|||+++ ..+|+||||||+|||++.
T Consensus 103 ~~~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~ 177 (337)
T 3mdy_A 103 GTGSWTQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177 (337)
T ss_dssp SCGGGCEEEEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred CCCCCCceEEEEeccCCCcHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence 7 78999999999999999993 336899999999999999999999861 237999999999999999
Q ss_pred CCceEEEecCCccccCCCCcce---eccccccccccchhhhccCCCCch------HHHHHHHHHHHHHHcC---------
Q 043333 714 DLNPKISDFGLAKLDEEDNTHI---STRIAGTFGYMAPEYAMRGYLTDK------ADVYSFGIVALEIVSG--------- 775 (809)
Q Consensus 714 ~~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------sDVwSlGvil~elltG--------- 775 (809)
++++||+|||+++......... .....||+.|+|||++.+.....+ +|||||||++|||+||
T Consensus 178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~ 257 (337)
T 3mdy_A 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257 (337)
T ss_dssp TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence 9999999999997654332221 123579999999999987766554 9999999999999999
Q ss_pred -CCCCCC
Q 043333 776 -RSNVIC 781 (809)
Q Consensus 776 -k~P~~~ 781 (809)
+.||..
T Consensus 258 ~~~p~~~ 264 (337)
T 3mdy_A 258 YQLPYHD 264 (337)
T ss_dssp CCCTTTT
T ss_pred ccccHhh
Confidence 777754
No 188
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-33 Score=306.10 Aligned_cols=202 Identities=31% Similarity=0.496 Sum_probs=166.6
Q ss_pred cCCCCCCeeccCCCccEEEeEeeC-----CeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLAD-----GKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~~-----g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
++|...+.||+|+||.||+|.... +..||||+++.... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456678999999999999998653 24699999875432 334578899999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 9999999999999843 234689999999999999999999998 8999999999999999999999999999866
Q ss_pred CCCCcc--eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 729 EEDNTH--ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 729 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
...... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 254 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC
Confidence 433221 1122346788999999999999999999999999999999 99999654
No 189
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1e-33 Score=312.47 Aligned_cols=198 Identities=26% Similarity=0.418 Sum_probs=155.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeC------C
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEG------N 644 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~------~ 644 (809)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46888999999999999999985 468999999986542 22346788999999999999999999999754 5
Q ss_pred eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCC
Q 043333 645 QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 724 (809)
Q Consensus 645 ~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 724 (809)
..++|+||+ +++|.+++. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 689998883 24689999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 235 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9865432 234578999999999877 6789999999999999999999999977543
No 190
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.1e-34 Score=307.05 Aligned_cols=205 Identities=24% Similarity=0.355 Sum_probs=172.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEe----CCeEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIE----GNQLLL 648 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~----~~~~~l 648 (809)
.++|+..+.||+|+||.||++.. .+++.||||++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46788999999999999999996 5789999999876655556788999999999999999999999973 347899
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999864433456799999999999999999999998 8999999999999999999999999998754
Q ss_pred CCCCcc--------eeccccccccccchhhhccCC---CCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 729 EEDNTH--------ISTRIAGTFGYMAPEYAMRGY---LTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 729 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
...... ......||+.|+|||.+.... ++.++|||||||++|||++|+.||..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 248 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence 321100 011245789999999987543 68899999999999999999999954
No 191
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-34 Score=314.18 Aligned_cols=201 Identities=29% Similarity=0.456 Sum_probs=159.8
Q ss_pred CCCCCCeeccCCCccEEEeEee--CC--eEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEe-CCeEEEE
Q 043333 576 NFAPDNKIGEGGFGPVYKGLLA--DG--KVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIE-GNQLLLI 649 (809)
Q Consensus 576 ~f~~~~~LG~G~fG~Vy~~~~~--~g--~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~-~~~~~lV 649 (809)
.|...+.||+|+||.||+|.+. ++ ..||||.++.... ...++|.+|++++++++||||++++++|.+ .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4566789999999999999864 22 4689999865432 345678999999999999999999999865 4578999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++.. ....+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 999999999999953 334578999999999999999999998 89999999999999999999999999998654
Q ss_pred CCCc---ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 730 EDNT---HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 730 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
.... .......+|+.|+|||.+.+..++.++|||||||++|||+| |++||...
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~ 300 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence 3221 11223457789999999999999999999999999999999 67788654
No 192
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4e-33 Score=321.12 Aligned_cols=201 Identities=29% Similarity=0.457 Sum_probs=172.1
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc-------------ccchhHHHHHHHHhhcCCCceEeEEe
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-------------QGNREFVNEIGMISALQHPNLVKLYG 638 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-------------~~~~~f~~Ei~~l~~l~H~nIv~l~~ 638 (809)
..++|...+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578899999999999999999965 578999999865421 22456889999999999999999999
Q ss_pred EEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC---
Q 043333 639 CCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL--- 715 (809)
Q Consensus 639 ~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~--- 715 (809)
++.+.+..++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQII----NRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999883 234689999999999999999999998 899999999999998775
Q ss_pred ceEEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 716 NPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 716 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.+||+|||++........ ....+||+.|+|||++. +.++.++||||+||++|||++|+.||...+
T Consensus 187 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 251 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251 (504)
T ss_dssp SEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 699999999987654322 23457999999999986 468999999999999999999999997654
No 193
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.6e-33 Score=301.99 Aligned_cols=203 Identities=27% Similarity=0.464 Sum_probs=170.7
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
..++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4578889999999999999999975 588999999977666667789999999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++++|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp CCTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred eCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999998842 234689999999999999999999998 8999999999999999999999999987532211
Q ss_pred Ccceeccccccccccchhhhc-----cCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 732 NTHISTRIAGTFGYMAPEYAM-----RGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 732 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 171 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 225 (302)
T 2j7t_A 171 L-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225 (302)
T ss_dssp H-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred c-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 0 1112346899999999983 567899999999999999999999999764
No 194
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.2e-33 Score=310.53 Aligned_cols=198 Identities=24% Similarity=0.358 Sum_probs=163.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCC------
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGN------ 644 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~------ 644 (809)
.++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 467889999999999999999854 68999999986542 223456889999999999999999999998765
Q ss_pred eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCC
Q 043333 645 QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 724 (809)
Q Consensus 645 ~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 724 (809)
..++||||+++ +|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999974 7888773 2488999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 174 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 230 (371)
T 2xrw_A 174 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 98654321 2234578999999999999899999999999999999999999997654
No 195
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.1e-33 Score=298.34 Aligned_cols=201 Identities=30% Similarity=0.484 Sum_probs=171.9
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~e 651 (809)
..++|+..+.||+|+||.||+|... +|+.||||++.... ..+++.+|++++.+++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4578999999999999999999965 58999999986543 35778999999999999999999999999999999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCC
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 731 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 731 (809)
|+++|+|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 105 YCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp CCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred cCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 9999999999842 345689999999999999999999998 8999999999999999999999999999765433
Q ss_pred CcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 732 NTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 732 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
.. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 179 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 228 (314)
T 3com_A 179 MA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228 (314)
T ss_dssp BS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 22 223456899999999999989999999999999999999999999764
No 196
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-33 Score=305.13 Aligned_cols=256 Identities=26% Similarity=0.343 Sum_probs=234.8
Q ss_pred CCCCEEEccCCCCCC--CCCcccCCCC-cccccccc-ccC-CCCchhhcCCccCcEEeecccccccCCCccccCCCCCCE
Q 043333 21 PFLQEIDLTRNYLNG--TIPSEWASLP-LVNLPLWK-QAN-GAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEK 95 (809)
Q Consensus 21 ~~L~~L~Ls~n~l~~--~~p~~~~~l~-L~~L~l~~-n~~-~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 95 (809)
.++++|+|++|.+.+ .+|..+..++ |+.|++++ |.+ +.+|..+.++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 678999999999998 8888888886 88899983 555 578999999999999999999999999999999999999
Q ss_pred EEccCCccCccCchhhhcccccceeeeecccccCcCchhhhccc-ccceEecccCcCCCCCCccccCCCCCCEEeccCCC
Q 043333 96 LHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWT-KLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLN 174 (809)
Q Consensus 96 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 174 (809)
|+|++|++++.+|..+.++++|++|+|++|++++.+|..+..++ +|+.|+|++|++++.+|..+..+. |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999997 9999999999
Q ss_pred CCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChh
Q 043333 175 GPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDW 253 (809)
Q Consensus 175 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~ 253 (809)
+....+..+..+++|+.|+|++|++.+.+|. +..+++|++|+|++|+|++.+|..+.. ++|+.|+|++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9998888999999999999999999988777 888999999999999999999988876 99999999999999999988
Q ss_pred hhhccCccccccCCccccCCCCCcc
Q 043333 254 IVRKRNKHIDLSYNNFIDGSSDSNC 278 (809)
Q Consensus 254 ~~~~~l~~L~Ls~N~l~~~~~~~~~ 278 (809)
....+++.+++++|+..|+.|...|
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred ccccccChHHhcCCCCccCCCCCCC
Confidence 6567889999999997776554444
No 197
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.9e-33 Score=300.77 Aligned_cols=209 Identities=26% Similarity=0.427 Sum_probs=165.2
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEee----CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCe
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLLA----DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQ 645 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 645 (809)
...++|...+.||+|+||.||+|... .++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34577888999999999999999854 34589999986543 2234678999999999999999999999987653
Q ss_pred -----EEEEEEcccCCchhhhccCCC--ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceE
Q 043333 646 -----LLLIYEYMENNSLARALFGPE--EHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPK 718 (809)
Q Consensus 646 -----~~lV~ey~~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 718 (809)
.++||||+++|+|.+++.... .....+++..+..++.|+++||.|||++ +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 499999999999999884322 3345699999999999999999999998 899999999999999999999
Q ss_pred EEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 719 ISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 719 l~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
|+|||++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 254 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 999999986543321 12223457889999999999999999999999999999999 899997643
No 198
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.1e-33 Score=308.50 Aligned_cols=202 Identities=26% Similarity=0.403 Sum_probs=172.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeC-----CeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEG-----NQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~-----~~~ 646 (809)
.++|+..+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 467899999999999999999854 688999999875432 2346788999999999999999999999765 368
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++||||++ |+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 106 ~iv~e~~~-~~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 99999997 59999883 34589999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcce--eccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 727 LDEEDNTHI--STRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 727 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
......... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 237 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh
Confidence 664332211 234579999999998754 4589999999999999999999999977543
No 199
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=9.6e-33 Score=295.34 Aligned_cols=202 Identities=25% Similarity=0.412 Sum_probs=174.7
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc---------ccchhHHHHHHHHhhcC-CCceEeEEeEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK---------QGNREFVNEIGMISALQ-HPNLVKLYGCCI 641 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---------~~~~~f~~Ei~~l~~l~-H~nIv~l~~~~~ 641 (809)
..++|+..+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578899999999999999999965 689999999865431 12356788999999996 999999999999
Q ss_pred eCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEe
Q 043333 642 EGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISD 721 (809)
Q Consensus 642 ~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 721 (809)
+.+..++||||+++++|.+++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 9999999999999999999984 234689999999999999999999998 899999999999999999999999
Q ss_pred cCCccccCCCCcceeccccccccccchhhhc------cCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 722 FGLAKLDEEDNTHISTRIAGTFGYMAPEYAM------RGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 722 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
||++........ .....||+.|+|||++. ...++.++||||||+++|||++|+.||...+
T Consensus 168 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 168 FGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp CTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 999986654322 23456899999999985 4567899999999999999999999997643
No 200
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.4e-33 Score=301.29 Aligned_cols=203 Identities=27% Similarity=0.463 Sum_probs=172.0
Q ss_pred HhcCCCCCCeeccCCCccEEEeEe--eCCeEEEEEEecccCc--ccchhHHHHHHHHhhc---CCCceEeEEeEEE----
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLL--ADGKVIAVKQLSSKSK--QGNREFVNEIGMISAL---QHPNLVKLYGCCI---- 641 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~--~~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l---~H~nIv~l~~~~~---- 641 (809)
+.++|+..+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999996 4688999999865432 2245677888877766 8999999999997
Q ss_pred -eCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEE
Q 043333 642 -EGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 720 (809)
Q Consensus 642 -~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~ 720 (809)
.....++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 69999885322 23489999999999999999999998 89999999999999999999999
Q ss_pred ecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 721 DFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 721 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999997654322 2234568999999999999999999999999999999999999997654
No 201
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.8e-33 Score=301.48 Aligned_cols=200 Identities=26% Similarity=0.411 Sum_probs=168.0
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc--------ccchhHHHHHHHHhhcCCCceEeEEeEEEeC
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK--------QGNREFVNEIGMISALQHPNLVKLYGCCIEG 643 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--------~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~ 643 (809)
..++|...+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4567899999999999999999864 589999999865321 2234688999999999999999999998765
Q ss_pred CeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc---eEEE
Q 043333 644 NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKIS 720 (809)
Q Consensus 644 ~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~ 720 (809)
+ .++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 5 8999999999999998843 34689999999999999999999998 8999999999999987654 9999
Q ss_pred ecCCccccCCCCcceeccccccccccchhhhc---cCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 721 DFGLAKLDEEDNTHISTRIAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 721 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
|||+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 160 Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (322)
T 2ycf_A 160 DFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222 (322)
T ss_dssp CCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred cCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 999998764322 223456899999999874 467889999999999999999999999754
No 202
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.2e-33 Score=311.62 Aligned_cols=201 Identities=27% Similarity=0.374 Sum_probs=165.6
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCe------EE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQ------LL 647 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~------~~ 647 (809)
..+|...+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+. .+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 356888999999999999999987777799998854322 22369999999999999999999976443 78
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCCceEEEecCCcc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAK 726 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kl~DfGla~ 726 (809)
+||||++++.+ +.+.........+++..+..++.|+++||+|||++ +|+||||||+|||++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999987543 33322222345789999999999999999999998 899999999999999 78999999999998
Q ss_pred ccCCCCcceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 727 LDEEDNTHISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 727 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
........ ....||+.|+|||++.+. .++.++||||+||++|||++|+.||...+.
T Consensus 191 ~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 247 (394)
T 4e7w_A 191 ILIAGEPN--VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247 (394)
T ss_dssp ECCTTCCC--CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cccCCCCC--cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 76443322 345689999999998764 589999999999999999999999987543
No 203
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.5e-33 Score=330.38 Aligned_cols=195 Identities=30% Similarity=0.449 Sum_probs=164.3
Q ss_pred CeeccCCCccEEEeEee---CCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEEEcccC
Q 043333 581 NKIGEGGFGPVYKGLLA---DGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMEN 655 (809)
Q Consensus 581 ~~LG~G~fG~Vy~~~~~---~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ey~~~ 655 (809)
+.||+|+||.||+|.+. .++.||||+++.... ...++|.+|++++++++|||||+++++|.+ +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 467899999976432 235679999999999999999999999964 568899999999
Q ss_pred CchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc--
Q 043333 656 NSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT-- 733 (809)
Q Consensus 656 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~-- 733 (809)
|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999994 334689999999999999999999998 899999999999999999999999999987654332
Q ss_pred ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~ 577 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 12233456789999999999999999999999999999998 999997643
No 204
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3e-33 Score=295.83 Aligned_cols=200 Identities=25% Similarity=0.426 Sum_probs=167.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367888999999999999999975 68999999986542 23345788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++++|.+++.. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999842 34589999999999999999999998 89999999999999999999999999998664
Q ss_pred CCCcceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
.... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...
T Consensus 163 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 163 DGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 3321 234568999999999987665 68999999999999999999999764
No 205
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.3e-33 Score=300.85 Aligned_cols=201 Identities=27% Similarity=0.410 Sum_probs=165.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEE-----------
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCI----------- 641 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~----------- 641 (809)
.++|...+.||+|+||.||+|... +++.||||++........+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467889999999999999999975 48999999987665555678899999999999999999999873
Q ss_pred ---eCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCCce
Q 043333 642 ---EGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNP 717 (809)
Q Consensus 642 ---~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~ 717 (809)
+.+..++||||++ |+|.+++. ..++++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3467899999998 69999983 34688999999999999999999998 899999999999997 56799
Q ss_pred EEEecCCccccCCCCc--ceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 718 KISDFGLAKLDEEDNT--HISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 718 kl~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
||+|||+++....... .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 9999999986643221 11223457889999998865 678999999999999999999999997654
No 206
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-33 Score=323.30 Aligned_cols=334 Identities=17% Similarity=0.165 Sum_probs=224.4
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFS 80 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~ 80 (809)
|+|++|++.+..|..|..+++|++|+|++|++++..|..|..++ |+.|++++|.+..+|.. .+++|++|+|++|.++
T Consensus 26 L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~~N~l~ 103 (520)
T 2z7x_B 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLSFNAFD 103 (520)
T ss_dssp EECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECCSSCCS
T ss_pred EECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEeccCCccc
Confidence 55666666655555666666666666666666655566666654 66666666666666655 5666666666666666
Q ss_pred c-CCCccccCCCCCCEEEccCCccCccCchhhhccccc--ceeeeecccc--cCcCchhhhccc----------------
Q 043333 81 G-DLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRL--KHFRISDNHF--TGQIPDYIQNWT---------------- 139 (809)
Q Consensus 81 ~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~---------------- 139 (809)
+ .+|..|+++++|++|+|++|++++ ..+..+++| +.|+|++|++ .+..|..+..+.
T Consensus 104 ~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~ 180 (520)
T 2z7x_B 104 ALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHF 180 (520)
T ss_dssp SCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCC
T ss_pred cccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhh
Confidence 4 345566666666666666666653 234444444 5555555555 444444444322
Q ss_pred -------------------------------------------------------------------ccceEecccCcCC
Q 043333 140 -------------------------------------------------------------------KLEKLFIEGSGLA 152 (809)
Q Consensus 140 -------------------------------------------------------------------~L~~L~L~~N~l~ 152 (809)
+|++|++++|+++
T Consensus 181 ~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 260 (520)
T 2z7x_B 181 ILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQ 260 (520)
T ss_dssp CCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEE
T ss_pred hhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeeccccc
Confidence 5666777777777
Q ss_pred CCCCccc-----------------------------------------------------cCCCCCCEEeccCCCCCCCC
Q 043333 153 GPIPSGI-----------------------------------------------------ASLVELTDLRISDLNGPEGP 179 (809)
Q Consensus 153 ~~~p~~~-----------------------------------------------------~~l~~L~~L~l~~n~l~~~~ 179 (809)
+.+|..+ ..+++|+.|++++|.+....
T Consensus 261 ~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~ 340 (520)
T 2z7x_B 261 GQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTV 340 (520)
T ss_dssp SCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTT
T ss_pred CccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhh
Confidence 6666554 56778889999999988877
Q ss_pred CccccCCcCCceeeeccccccC--CCChhhhccccccEEeccCCCCCCCCC-CCCCC-CCccEEEeeCccCCCCCChhhh
Q 043333 180 FPRLSNLKNMNYLILRSGNIIG--EMPEYLGQMIGLRVLDLSFNKLSGVIP-SNFSG-SGLTYMYLTGNLLTGPVPDWIV 255 (809)
Q Consensus 180 ~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~-~~L~~L~Ls~N~l~~~~p~~~~ 255 (809)
+..+.++++|++|+|++|++.+ .+|..+..+++|+.|+|++|++++.+| ..+.. ++|+.|+|++|++++..|..+.
T Consensus 341 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 420 (520)
T 2z7x_B 341 FENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP 420 (520)
T ss_dssp TTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC
T ss_pred hhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc
Confidence 7888999999999999999987 566789999999999999999998444 44555 8999999999999887776654
Q ss_pred hccCccccccCCccccCCCCCcccccccceeccccCCCC--CC-ccccccccCCCCCCCcceeecCCCcee-ee---cCC
Q 043333 256 RKRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSEGSN--ST-GIVSCLKSFTCPTNHSSLHINCGGKQV-IA---NGS 328 (809)
Q Consensus 256 ~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~c~~~~~~~~~~~~~~~~C~~~~~-~~---~~~ 328 (809)
..++.|+|++|+++.. +..+.....+..+..+.+... +. ....+.+.......+|||.|+|...++ .. ...
T Consensus 421 -~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~~~~~~~~ 498 (520)
T 2z7x_B 421 -PRIKVLDLHSNKIKSI-PKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNS 498 (520)
T ss_dssp -TTCCEEECCSSCCCCC-CGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHHHHHTT
T ss_pred -ccCCEEECCCCccccc-chhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCchHHHHHHHHhcc
Confidence 5789999999999854 443434444444444333222 11 133455667778999999999998777 21 223
Q ss_pred eeecCCCCCCCCcc
Q 043333 329 TTFEDDLDAAGPSR 342 (809)
Q Consensus 329 ~~~~~~~~~~g~~~ 342 (809)
....++..|.+|+.
T Consensus 499 ~~~~~~~~C~~p~~ 512 (520)
T 2z7x_B 499 QKEQGSAKCSGSGK 512 (520)
T ss_dssp TTEESCCBBTTTCC
T ss_pred ccCCCCCCcCCccc
Confidence 34567888988853
No 207
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=309.37 Aligned_cols=198 Identities=17% Similarity=0.217 Sum_probs=169.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeC---------CeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEe---------
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLAD---------GKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVK--------- 635 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~---------g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~--------- 635 (809)
.++|...+.||+|+||.||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3678899999999999999999653 789999998643 56889999999999999987
Q ss_pred ------EEeEEEe-CCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCC
Q 043333 636 ------LYGCCIE-GNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATN 708 (809)
Q Consensus 636 ------l~~~~~~-~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~N 708 (809)
+++++.. .+..++||||+ +|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 6788876 67889999999 99999999532 135699999999999999999999998 89999999999
Q ss_pred EEEcCCC--ceEEEecCCccccCCCCcc------eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 043333 709 VLLDKDL--NPKISDFGLAKLDEEDNTH------ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVI 780 (809)
Q Consensus 709 ILl~~~~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~ 780 (809)
||++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 9999999999865432211 1133579999999999999899999999999999999999999997
Q ss_pred CC
Q 043333 781 CR 782 (809)
Q Consensus 781 ~~ 782 (809)
..
T Consensus 270 ~~ 271 (352)
T 2jii_A 270 NC 271 (352)
T ss_dssp GG
T ss_pred cC
Confidence 64
No 208
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=9.8e-33 Score=301.35 Aligned_cols=207 Identities=30% Similarity=0.441 Sum_probs=174.6
Q ss_pred CccHHHHHHHhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhh--cCCCceEeEEeEEE
Q 043333 564 SFTLRQIKAATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISA--LQHPNLVKLYGCCI 641 (809)
Q Consensus 564 ~~~~~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~~~~~ 641 (809)
..+........++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++.
T Consensus 31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred CCceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 344445556678999999999999999999987 5899999998643 34567889998887 78999999999999
Q ss_pred eCC----eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEcCCCCCCE
Q 043333 642 EGN----QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLH--------EESRLKIVHRDIKATNV 709 (809)
Q Consensus 642 ~~~----~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiH~Dlkp~NI 709 (809)
..+ ..++||||+++|+|.+++. ...+++..+..++.|++.||+||| +. +|+||||||+||
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NI 178 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNI 178 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGE
T ss_pred ccCCccceeEEEEeecCCCcHHHHHh-----ccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHE
Confidence 876 7899999999999999993 236899999999999999999999 55 899999999999
Q ss_pred EEcCCCceEEEecCCccccCCCCcc---eeccccccccccchhhhccCC------CCchHHHHHHHHHHHHHHcC-----
Q 043333 710 LLDKDLNPKISDFGLAKLDEEDNTH---ISTRIAGTFGYMAPEYAMRGY------LTDKADVYSFGIVALEIVSG----- 775 (809)
Q Consensus 710 Ll~~~~~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~ksDVwSlGvil~elltG----- 775 (809)
+++.++++||+|||++......... ......||+.|+|||++.+.. ++.++|||||||++|||+||
T Consensus 179 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 258 (342)
T 1b6c_B 179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258 (342)
T ss_dssp EECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred EECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCC
Confidence 9999999999999999866543322 123457899999999987652 33689999999999999999
Q ss_pred -----CCCCCCC
Q 043333 776 -----RSNVICR 782 (809)
Q Consensus 776 -----k~P~~~~ 782 (809)
+.||...
T Consensus 259 ~~~~~~~p~~~~ 270 (342)
T 1b6c_B 259 IHEDYQLPYYDL 270 (342)
T ss_dssp BCCCCCCTTTTT
T ss_pred cccccccCcccc
Confidence 7788653
No 209
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1e-33 Score=308.22 Aligned_cols=207 Identities=30% Similarity=0.428 Sum_probs=175.6
Q ss_pred HhcCCCCCCeeccCCCccEEEeEeeC------CeEEEEEEecccCc-ccchhHHHHHHHHhhc-CCCceEeEEeEEEeCC
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLAD------GKVIAVKQLSSKSK-QGNREFVNEIGMISAL-QHPNLVKLYGCCIEGN 644 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~ 644 (809)
..++|...+.||+|+||.||+|.... ++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 45778889999999999999998532 24799999876532 3356789999999999 8999999999999999
Q ss_pred eEEEEEEcccCCchhhhccCCCc----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC
Q 043333 645 QLLLIYEYMENNSLARALFGPEE----------HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD 714 (809)
Q Consensus 645 ~~~lV~ey~~~gsL~~~L~~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~ 714 (809)
..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 99999999999999999853211 134579999999999999999999998 89999999999999999
Q ss_pred CceEEEecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 715 LNPKISDFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 715 ~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
+.+||+|||++........ .......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 9999999999986543322 22233457889999999999999999999999999999999 99999764
No 210
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.7e-33 Score=313.72 Aligned_cols=200 Identities=21% Similarity=0.312 Sum_probs=171.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhc------CCCceEeEEeEEEeCCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISAL------QHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l------~H~nIv~l~~~~~~~~~~ 646 (809)
..+|+..+.||+|+||.||+|... +++.||||+++.. ....+++.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457889999999999999999854 5899999999653 22345677888888777 577999999999999999
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc--eEEEecCC
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN--PKISDFGL 724 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~--~kl~DfGl 724 (809)
++||||++ ++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 99999996 6899888532 223589999999999999999999998 8999999999999999987 99999999
Q ss_pred ccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
++..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+.
T Consensus 249 a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 249 SCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 9764432 2245789999999999999999999999999999999999999977543
No 211
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.1e-33 Score=299.15 Aligned_cols=203 Identities=25% Similarity=0.369 Sum_probs=158.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCc-ccc-hhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSK-QGN-REFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~-~~~-~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.++|+..+.||+|+||.||+|.. .+|+.||||++..... ... +.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788999999999999999996 4789999999875422 222 33444555688889999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||++ |+|.+++.........+++..+..++.|++.||+|||++. +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 5888877543334567999999999999999999999862 699999999999999999999999999986543
Q ss_pred CCcceeccccccccccchhhh----ccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYA----MRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
... .....||+.|+|||.+ .+..++.++||||+||++|||++|+.||..
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 322 2234689999999996 556789999999999999999999999975
No 212
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.4e-33 Score=297.16 Aligned_cols=202 Identities=30% Similarity=0.441 Sum_probs=169.1
Q ss_pred hcCCCCCC-eeccCCCccEEEeEee---CCeEEEEEEecccCcc--cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEE
Q 043333 574 TNNFAPDN-KIGEGGFGPVYKGLLA---DGKVIAVKQLSSKSKQ--GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 574 ~~~f~~~~-~LG~G~fG~Vy~~~~~---~g~~vAVK~~~~~~~~--~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 647 (809)
.++|...+ .||+|+||.||+|.+. .++.||||++...... ..+++.+|+++++.++||||+++++++ +.+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 8999999999999643 4688999998755322 246789999999999999999999999 667789
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999943 34589999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcce--eccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 728 DEEDNTHI--STRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 225 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 65443322 122346788999999998889999999999999999999 999997643
No 213
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=304.86 Aligned_cols=202 Identities=29% Similarity=0.478 Sum_probs=173.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-----eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCC--eE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-----ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGN--QL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~--~~ 646 (809)
.++|+..+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35677889999999999999984 358899999997765555678999999999999999999999987654 67
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 120 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEEECCCTTCBHHHHHHH---STTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 999999999999999943 234589999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcce--eccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 727 LDEEDNTHI--STRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 727 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
......... .....++..|+|||.+.+..++.++|||||||++|||+||+.|+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 250 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 765443221 2234567789999999988899999999999999999999999864
No 214
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.7e-33 Score=305.55 Aligned_cols=210 Identities=24% Similarity=0.336 Sum_probs=162.4
Q ss_pred HHHHHHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeCCe-
Q 043333 568 RQIKAATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQ- 645 (809)
Q Consensus 568 ~~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~- 645 (809)
.......++|+..+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 344566789999999999999999999964 68999999985543 334567788899999999999999999976443
Q ss_pred ------EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEEcCCCCCCEEEcC-CCc
Q 043333 646 ------LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLH--EESRLKIVHRDIKATNVLLDK-DLN 716 (809)
Q Consensus 646 ------~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~iiH~Dlkp~NILl~~-~~~ 716 (809)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 7899999987 444444222234456889999999999999999999 66 8999999999999997 899
Q ss_pred eEEEecCCccccCCCCcceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 717 PKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 717 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
+||+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+.
T Consensus 171 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 237 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237 (360)
T ss_dssp EEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh
Confidence 99999999987654332 2345689999999998664 489999999999999999999999987543
No 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.8e-33 Score=301.43 Aligned_cols=209 Identities=27% Similarity=0.425 Sum_probs=159.0
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
...++|+..+.||+|+||.||+|.. .+++.||||++.... ....+++.+|++++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3467899999999999999999985 468899999986543 33456788999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCC----CccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCc
Q 043333 650 YEYMENNSLARALFGP----EEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 725 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 725 (809)
|||+++|+|.+++... ......+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 9999999999988421 11244689999999999999999999998 8999999999999999999999999998
Q ss_pred cccCCCCc----ceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 726 KLDEEDNT----HISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 726 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
........ .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 231 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 231 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc
Confidence 76543221 11233568999999999876 568999999999999999999999997643
No 216
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.4e-32 Score=313.11 Aligned_cols=202 Identities=25% Similarity=0.341 Sum_probs=172.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcCC-CceEeEEeEEEeCCeEEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQH-PNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H-~nIv~l~~~~~~~~~~~lV~e 651 (809)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .+++..|+++++.++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999995 5689999998765433 3568899999999986 566677777788889999999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCceEEEecCCcccc
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 728 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~ 728 (809)
|+ +++|.+++.. ....+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~-g~sL~~ll~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 9999999842 234689999999999999999999998 89999999999999 68899999999999876
Q ss_pred CCCCcc------eeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 729 EEDNTH------ISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 729 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~ 218 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 218 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 543321 12246799999999999999999999999999999999999999977443
No 217
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.6e-33 Score=299.83 Aligned_cols=203 Identities=29% Similarity=0.441 Sum_probs=167.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeC----CeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEe-CCeEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLAD----GKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIE-GNQLL 647 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~----g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~-~~~~~ 647 (809)
..+|+..+.||+|+||.||+|...+ +..||||.+..... ...+.+.+|++++++++||||++++++|.+ .+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3467788999999999999998542 23689999875432 335678999999999999999999999764 45789
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 99999999999999953 334678999999999999999999998 899999999999999999999999999986
Q ss_pred cCCCCc---ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 728 DEEDNT---HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 728 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
...... .......+|+.|+|||.+.+..++.++||||+|+++|||++ |++||...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~ 236 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 236 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 543221 11233557889999999999999999999999999999999 55566543
No 218
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.1e-32 Score=299.37 Aligned_cols=193 Identities=19% Similarity=0.357 Sum_probs=169.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcC-CCceEeEEeEEEe--CCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLYGCCIE--GNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~~~~~~--~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|.. .+++.||||++... ..+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36788999999999999999985 46899999998643 3467889999999997 9999999999998 5678999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC-ceEEEecCCcccc
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL-NPKISDFGLAKLD 728 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~ 728 (809)
|||+++++|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++..
T Consensus 112 ~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 99999999999872 378899999999999999999998 899999999999999776 8999999999876
Q ss_pred CCCCcceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 729 EEDNTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 729 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 182 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 182 HPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp CTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 54332 234568999999999877 6789999999999999999999999954
No 219
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-33 Score=297.70 Aligned_cols=198 Identities=30% Similarity=0.429 Sum_probs=166.9
Q ss_pred CCCCCCeeccCCCccEEEeEeeC----CeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeE-EEE
Q 043333 576 NFAPDNKIGEGGFGPVYKGLLAD----GKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQL-LLI 649 (809)
Q Consensus 576 ~f~~~~~LG~G~fG~Vy~~~~~~----g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~-~lV 649 (809)
.|...+.||+|+||+||+|.+.+ +..||+|++..... ...+.|.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45566899999999999998542 23799999875433 3356789999999999999999999999876665 999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+.+|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 999999999999954 234689999999999999999999998 89999999999999999999999999997553
Q ss_pred CCC---cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCC
Q 043333 730 EDN---THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNV 779 (809)
Q Consensus 730 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~ 779 (809)
... ........+++.|+|||.+.+..++.++|||||||++|||++|+.|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~ 228 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence 321 11223356788999999999999999999999999999999966554
No 220
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.3e-33 Score=303.43 Aligned_cols=206 Identities=29% Similarity=0.417 Sum_probs=170.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEe------eCCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL------ADGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 646 (809)
.++|...+.||+|+||.||+|++ .+++.||||++.... .....++.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788899999999999999984 246789999986542 33456789999999999999999999999999999
Q ss_pred EEEEEcccCCchhhhccCCCc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCceEEE
Q 043333 647 LLIYEYMENNSLARALFGPEE---HRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKIS 720 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~ 720 (809)
++||||+++|+|.+++..... ....+++..+..++.|++.||.|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999964321 224589999999999999999999998 8999999999999984 4569999
Q ss_pred ecCCccccCCCCc-ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 721 DFGLAKLDEEDNT-HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 721 DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
|||++........ .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 249 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence 9999875432221 22233567889999999999999999999999999999998 99999764
No 221
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7e-33 Score=310.18 Aligned_cols=203 Identities=27% Similarity=0.440 Sum_probs=155.3
Q ss_pred cCCCC-CCeeccCCCccEEEeEee---CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEe--CCeEEE
Q 043333 575 NNFAP-DNKIGEGGFGPVYKGLLA---DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIE--GNQLLL 648 (809)
Q Consensus 575 ~~f~~-~~~LG~G~fG~Vy~~~~~---~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~--~~~~~l 648 (809)
+.|+. .++||+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.. ....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34554 568999999999999965 47889999986432 24578899999999999999999999965 668999
Q ss_pred EEEcccCCchhhhccCCC-----ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----cCCCceEE
Q 043333 649 IYEYMENNSLARALFGPE-----EHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL----DKDLNPKI 719 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~-----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kl 719 (809)
||||++ |+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999997 47877774211 1233589999999999999999999998 89999999999999 77899999
Q ss_pred EecCCccccCCCCc--ceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 720 SDFGLAKLDEEDNT--HISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 720 ~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
+|||+++....... ......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 99999987643221 22234678999999999987 458999999999999999999999997643
No 222
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.5e-33 Score=306.12 Aligned_cols=204 Identities=24% Similarity=0.390 Sum_probs=170.3
Q ss_pred HhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCc-ccchhHHHHHHH-HhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSK-QGNREFVNEIGM-ISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~-~~~~~f~~Ei~~-l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
..++|+..+.||+|+||.||+|.. .+|+.||||++..... ....++..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 346788899999999999999995 4789999999875532 233455566655 7788999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++ +|.+++.........+++..+..++.|++.||+|||++. +|+||||||+|||++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999985 998888543334567999999999999999999999752 79999999999999999999999999998654
Q ss_pred CCCcceeccccccccccchhhhc----cCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAM----RGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
.. .......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 206 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~ 259 (340)
T 3an0_A 206 DS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259 (340)
T ss_dssp CH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred cc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 32 1122356899999999974 34789999999999999999999999975
No 223
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.6e-33 Score=311.72 Aligned_cols=198 Identities=12% Similarity=0.055 Sum_probs=152.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc---ccchhHHHHHHHHhhc--CCCceEeEE-------eEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK---QGNREFVNEIGMISAL--QHPNLVKLY-------GCC 640 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~f~~Ei~~l~~l--~H~nIv~l~-------~~~ 640 (809)
..+|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++..+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999964 789999999976543 2245567775544444 699988755 455
Q ss_pred EeC-----------------CeEEEEEEcccCCchhhhccCCCccCCCCCHHHH------HHHHHHHHHHHHHHHhCCCC
Q 043333 641 IEG-----------------NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTR------HSICIGLARGLAYLHEESRL 697 (809)
Q Consensus 641 ~~~-----------------~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~ 697 (809)
... ...++||||++ |+|.+++... ...+.+..+ ..++.|++.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 443 33799999999 8999999532 223455556 78889999999999998
Q ss_pred CeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCcceeccccccccccchhhhcc--CCCCchHHHHHHHHHHHHHHcC
Q 043333 698 KIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMR--GYLTDKADVYSFGIVALEIVSG 775 (809)
Q Consensus 698 ~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDVwSlGvil~elltG 775 (809)
+|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999865422 113456799999999987 6789999999999999999999
Q ss_pred CCCCCCC
Q 043333 776 RSNVICR 782 (809)
Q Consensus 776 k~P~~~~ 782 (809)
+.||...
T Consensus 290 ~~Pf~~~ 296 (371)
T 3q60_A 290 FLPFGLV 296 (371)
T ss_dssp SCSTTBC
T ss_pred CCCCCCc
Confidence 9999764
No 224
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-34 Score=310.36 Aligned_cols=196 Identities=32% Similarity=0.467 Sum_probs=153.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhh--cCCCceEeEEeEEEeCC----eEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISA--LQHPNLVKLYGCCIEGN----QLL 647 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~~~~~~~~----~~~ 647 (809)
.++|...+.||+|+||.||+|+.. |+.||||++... ..+.+.+|.+++.. ++||||+++++++.+.+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 367899999999999999999874 889999998643 34567788888887 78999999999999876 789
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEcCCCCCCEEEcCCCceEE
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLH--------EESRLKIVHRDIKATNVLLDKDLNPKI 719 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiH~Dlkp~NILl~~~~~~kl 719 (809)
+||||+++|+|.+++. ...+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||
T Consensus 78 lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEECCTTCCHHHHHH-----HCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEeccCCCCHHHHHh-----ccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 9999999999999993 335778889999999999999999 65 8999999999999999999999
Q ss_pred EecCCccccCCCCcce---eccccccccccchhhhccC------CCCchHHHHHHHHHHHHHHcC----------CCCCC
Q 043333 720 SDFGLAKLDEEDNTHI---STRIAGTFGYMAPEYAMRG------YLTDKADVYSFGIVALEIVSG----------RSNVI 780 (809)
Q Consensus 720 ~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~ksDVwSlGvil~elltG----------k~P~~ 780 (809)
+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 9999997654433221 2234699999999998776 344689999999999999999 77775
Q ss_pred C
Q 043333 781 C 781 (809)
Q Consensus 781 ~ 781 (809)
.
T Consensus 230 ~ 230 (303)
T 3gxj_A 230 D 230 (303)
T ss_dssp T
T ss_pred c
Confidence 4
No 225
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=7.2e-33 Score=303.88 Aligned_cols=201 Identities=24% Similarity=0.407 Sum_probs=170.1
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeC-----CeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEG-----NQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~-----~~~ 646 (809)
.++|...+.||+|+||.||+|... +|+.||||++..... .....+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999965 689999999864432 2345688999999999999999999998764 678
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++||||++ |+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 90 ~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIS-----TQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 68999883 24689999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcc---------eeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 727 LDEEDNTH---------ISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 727 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 227 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 66432211 1123568999999998765 678999999999999999999999997754
No 226
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.2e-32 Score=319.45 Aligned_cols=316 Identities=20% Similarity=0.196 Sum_probs=237.8
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeeccccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQF 79 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l 79 (809)
+|+|++|++.+..|..|..+++|++|+|++|++++..|..|..++ |+.|++++|.+..+|.. .+++|++|+|++|++
T Consensus 56 ~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls~N~l 133 (562)
T 3a79_B 56 ALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLSFNDF 133 (562)
T ss_dssp EEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECCSSCC
T ss_pred EEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECCCCCc
Confidence 367888888877777888888888888888888877788888775 88888888888888877 788888888888888
Q ss_pred cc-CCCccccCCCCCCEEEccCCccCccCchhhhccccc--ceeeeecccc--cCcCchhhhccc---------------
Q 043333 80 SG-DLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRL--KHFRISDNHF--TGQIPDYIQNWT--------------- 139 (809)
Q Consensus 80 ~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~--------------- 139 (809)
++ .+|..|+++++|++|+|++|++++ ..+..+++| +.|+|++|++ ++..|..+..+.
T Consensus 134 ~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~ 210 (562)
T 3a79_B 134 DVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFS 210 (562)
T ss_dssp SBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCC
T ss_pred cccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchh
Confidence 85 345788888888888888888874 244455555 7788887777 555555554432
Q ss_pred ------------------------------------------------------------------ccceEecccCcCCC
Q 043333 140 ------------------------------------------------------------------KLEKLFIEGSGLAG 153 (809)
Q Consensus 140 ------------------------------------------------------------------~L~~L~L~~N~l~~ 153 (809)
+|++|++++|++++
T Consensus 211 ~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 290 (562)
T 3a79_B 211 VQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITE 290 (562)
T ss_dssp CCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECS
T ss_pred hhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeec
Confidence 67777777888877
Q ss_pred CCCccc-----------------------------------------------------cCCCCCCEEeccCCCCCCCCC
Q 043333 154 PIPSGI-----------------------------------------------------ASLVELTDLRISDLNGPEGPF 180 (809)
Q Consensus 154 ~~p~~~-----------------------------------------------------~~l~~L~~L~l~~n~l~~~~~ 180 (809)
.+|..+ ..+++|+.|++++|.++...+
T Consensus 291 ~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 370 (562)
T 3a79_B 291 RIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVF 370 (562)
T ss_dssp CCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTT
T ss_pred cccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchh
Confidence 777655 567889999999999998888
Q ss_pred ccccCCcCCceeeeccccccCCC--ChhhhccccccEEeccCCCCCC-CCCCCCCC-CCccEEEeeCccCCCCCChhhhh
Q 043333 181 PRLSNLKNMNYLILRSGNIIGEM--PEYLGQMIGLRVLDLSFNKLSG-VIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR 256 (809)
Q Consensus 181 ~~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~ 256 (809)
..+.++++|++|+|++|++.+.. |..|..+++|+.|+|++|++++ +++..+.. ++|+.|+|++|++++.+|..+.
T Consensus 371 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~- 449 (562)
T 3a79_B 371 QGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP- 449 (562)
T ss_dssp TTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-
T ss_pred hhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc-
Confidence 88899999999999999998754 5678899999999999999998 44455555 8999999999999887776554
Q ss_pred ccCccccccCCccccCCCCCcccccccceeccccCCCC--CC-ccccccccCCCCCCCcceeecCCCcee
Q 043333 257 KRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSEGSN--ST-GIVSCLKSFTCPTNHSSLHINCGGKQV 323 (809)
Q Consensus 257 ~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~c~~~~~~~~~~~~~~~~C~~~~~ 323 (809)
..++.|+|++|+++..+.... ....+..+..+.+... +. ....+++.......+|||.|+|.+.++
T Consensus 450 ~~L~~L~L~~N~l~~ip~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 450 PKVKVLDLHNNRIMSIPKDVT-HLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp TTCSEEECCSSCCCCCCTTTT-SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHH
T ss_pred CcCCEEECCCCcCcccChhhc-CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHH
Confidence 578999999999986544333 4444444433333221 11 133455666778999999999987665
No 227
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=293.81 Aligned_cols=204 Identities=25% Similarity=0.331 Sum_probs=169.6
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC----cccchhHHHHHHHHhhcCCCceEeEEeEEEe--CCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS----KQGNREFVNEIGMISALQHPNLVKLYGCCIE--GNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~----~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~--~~~~ 646 (809)
.++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 478999999999999999999964 68899999986542 2335678999999999999999999999853 4578
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++||||++++ |.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 66666332 234689999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCC-cceeccccccccccchhhhccCC--CCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 727 LDEEDN-THISTRIAGTFGYMAPEYAMRGY--LTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 727 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
...... ........||+.|+|||++.+.. .+.++|||||||++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence 664322 22233456899999999987644 3789999999999999999999997643
No 228
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.98 E-value=1.4e-32 Score=299.25 Aligned_cols=200 Identities=22% Similarity=0.358 Sum_probs=172.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEe--eCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCc------eEeEEeEEEeCCe
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL--ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPN------LVKLYGCCIEGNQ 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~--~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~n------Iv~l~~~~~~~~~ 645 (809)
.++|++.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+++++.++|++ ++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46888999999999999999985 368899999986432 33466888999999887664 9999999999999
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC------------
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK------------ 713 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~------------ 713 (809)
.++||||+ +++|.+++... ...++++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 88999988432 224688999999999999999999998 8999999999999987
Q ss_pred -------CCceEEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 714 -------DLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 714 -------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred cccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 6789999999998654322 245789999999999998999999999999999999999999977543
No 229
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.98 E-value=3.9e-33 Score=295.44 Aligned_cols=198 Identities=32% Similarity=0.464 Sum_probs=164.3
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEeC-CeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEG-NQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~-~~~~lV~ey 652 (809)
.++|+..+.||+|+||.||+|.. .|+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 46788899999999999999986 48899999986543 456789999999999999999999997655 468999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCC
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 732 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 732 (809)
+++|+|.+++... ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 97 MAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 9999999998432 122378999999999999999999998 89999999999999999999999999987544321
Q ss_pred cceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 733 THISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 733 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 219 (278)
T 1byg_A 172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence 12357889999999999999999999999999999998 999997643
No 230
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.98 E-value=6.9e-33 Score=295.26 Aligned_cols=202 Identities=28% Similarity=0.470 Sum_probs=162.8
Q ss_pred hcCCCCCCeeccCCCccEEEeEee--CCe--EEEEEEecccC---cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA--DGK--VIAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~--~g~--~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 646 (809)
.++|+..+.||+|+||.||+|.+. +++ .||||+++... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357888999999999999999864 233 68999886542 233567889999999999999999999998765 8
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++|+||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHh---ccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 899999999999999843 234589999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcce--eccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 727 LDEEDNTHI--STRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 727 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
......... .....+|..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 228 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 228 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC
Confidence 765433221 223457888999999998889999999999999999999 99999764
No 231
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.98 E-value=3.3e-33 Score=304.03 Aligned_cols=205 Identities=25% Similarity=0.328 Sum_probs=157.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcC-CCceEeEEeEEEe--------C
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLYGCCIE--------G 643 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~~~~~~--------~ 643 (809)
..+|+..+.||+|+||.||+|... +++.||||++........+.+.+|++++.++. ||||+++++++.. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457888999999999999999964 68999999986665555677899999999996 9999999999953 3
Q ss_pred CeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecC
Q 043333 644 NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFG 723 (809)
Q Consensus 644 ~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 723 (809)
...++||||++ |+|.+++.... ....+++..+..++.|++.||+|||+++ ++|+||||||+|||++.++.+||+|||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred ceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCc
Confidence 45799999996 79998884321 2346899999999999999999999982 129999999999999999999999999
Q ss_pred CccccCCCCcce-----------eccccccccccchhhh---ccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 724 LAKLDEEDNTHI-----------STRIAGTFGYMAPEYA---MRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 724 la~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
+++......... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 998664432211 1134589999999998 566789999999999999999999999965
No 232
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=1e-32 Score=307.38 Aligned_cols=200 Identities=24% Similarity=0.344 Sum_probs=168.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcC--------CCceEeEEeEEE---
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQ--------HPNLVKLYGCCI--- 641 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~--------H~nIv~l~~~~~--- 641 (809)
.++|+..+.||+|+||+||+|+. .+++.||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46788999999999999999985 46899999998643 233467889999999986 788999999998
Q ss_pred -eCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC-----
Q 043333 642 -EGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDL----- 715 (809)
Q Consensus 642 -~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~----- 715 (809)
.....++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhh
Confidence 445789999999 55666655322 2346899999999999999999999963 699999999999999775
Q ss_pred --------------------------------------------ceEEEecCCccccCCCCcceeccccccccccchhhh
Q 043333 716 --------------------------------------------NPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYA 751 (809)
Q Consensus 716 --------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~ 751 (809)
.+||+|||++...... .....||+.|+|||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhh
Confidence 7999999999866432 2335689999999999
Q ss_pred ccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 752 MRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 752 ~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.+..++.++|||||||++|||++|+.||...+
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 99999999999999999999999999997644
No 233
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=1.4e-32 Score=298.01 Aligned_cols=204 Identities=30% Similarity=0.477 Sum_probs=168.5
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhc-CCCceEeEEeEEEe------C
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLYGCCIE------G 643 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~------~ 643 (809)
...++|+..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++.++ +||||+++++++.. .
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 99 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence 3567899999999999999999996 468999999986543 3457789999999999 79999999999987 4
Q ss_pred CeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecC
Q 043333 644 NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFG 723 (809)
Q Consensus 644 ~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 723 (809)
+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 100 DQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred ceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCc
Confidence 6789999999999999998532 234689999999999999999999998 89999999999999999999999999
Q ss_pred CccccCCCCcceeccccccccccchhhhc-----cCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 724 LAKLDEEDNTHISTRIAGTFGYMAPEYAM-----RGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 724 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
++........ ......||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 175 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 237 (326)
T 2x7f_A 175 VSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237 (326)
T ss_dssp TTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 9876543221 123356899999999986 567899999999999999999999999664
No 234
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.98 E-value=9.1e-33 Score=300.91 Aligned_cols=199 Identities=32% Similarity=0.501 Sum_probs=160.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHH--HhhcCCCceEeEEeEEEe-----CCeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGM--ISALQHPNLVKLYGCCIE-----GNQL 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~--l~~l~H~nIv~l~~~~~~-----~~~~ 646 (809)
.++|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++.+.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46788899999999999999976 68999999986432 2345555555 445899999999987653 2357
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEEcCCCCCCEEEcCCCceEEE
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEES------RLKIVHRDIKATNVLLDKDLNPKIS 720 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~iiH~Dlkp~NILl~~~~~~kl~ 720 (809)
++||||+++|+|.+++. ....++..+..++.|++.||+|||+.. .++|+||||||+|||++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLS-----LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHh-----hcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999993 234589999999999999999999872 2279999999999999999999999
Q ss_pred ecCCccccCCCC-------cceeccccccccccchhhhcc-------CCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 721 DFGLAKLDEEDN-------THISTRIAGTFGYMAPEYAMR-------GYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 721 DfGla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 999998664321 111224569999999999876 3566789999999999999999877643
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.98 E-value=3.4e-32 Score=289.74 Aligned_cols=202 Identities=26% Similarity=0.432 Sum_probs=173.8
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEE
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLL 648 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~l 648 (809)
...++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999965 68999999986543 2345678899999999999999999999999999999
Q ss_pred EEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC---CceEEEecCCc
Q 043333 649 IYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD---LNPKISDFGLA 725 (809)
Q Consensus 649 V~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kl~DfGla 725 (809)
|+||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999998842 34689999999999999999999998 89999999999999764 47999999999
Q ss_pred cccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 726 KLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 726 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
........ .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||...+
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC
Confidence 86543322 223458899999998865 48999999999999999999999997643
No 236
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.98 E-value=1.5e-31 Score=319.77 Aligned_cols=342 Identities=18% Similarity=0.176 Sum_probs=221.2
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCC------CCch----hhcCCccCc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANG------AIPK----AVASISTLA 70 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~------~ip~----~l~~l~~L~ 70 (809)
|+|++|++.+..|..|..+++|++|+|++|.+.+..|..|..++ |+.|++.+|..+ .+|. .+..+++|+
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~ 332 (680)
T 1ziw_A 253 LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLE 332 (680)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCC
T ss_pred EECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCC
Confidence 67777777777777778888888888888888777777776664 666666655443 3443 566777788
Q ss_pred EEeecccccccCCCccccCCCCCCEEEccC----------------------------CccCccCchhhhcccccceeee
Q 043333 71 DLTLEFNQFSGDLPAELGNLINLEKLHLNS----------------------------NNFTGKLPESFANLTRLKHFRI 122 (809)
Q Consensus 71 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~----------------------------N~l~~~~p~~~~~l~~L~~L~L 122 (809)
+|+|++|.+++..+..|.++++|++|+|++ |++++..|..|..+++|+.|+|
T Consensus 333 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 412 (680)
T 1ziw_A 333 HLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDL 412 (680)
T ss_dssp EEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred EEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeC
Confidence 888888888776666677666666666554 4455555666666777777777
Q ss_pred ecccccCcCc-hhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCC--CCCccccCCcCCceeeeccccc
Q 043333 123 SDNHFTGQIP-DYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPE--GPFPRLSNLKNMNYLILRSGNI 199 (809)
Q Consensus 123 s~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~--~~~~~l~~l~~L~~L~Ls~N~l 199 (809)
++|++++.+| ..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+.. ..+..+.++++|+.|+|++|++
T Consensus 413 ~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l 492 (680)
T 1ziw_A 413 GLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNI 492 (680)
T ss_dssp CSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCC
T ss_pred CCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCC
Confidence 7777765554 456677777777777777766666666666777777777666653 3345577788888888888888
Q ss_pred cCCCChhhhccccccEEeccCCCCCCCCCC--------CCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCcc
Q 043333 200 IGEMPEYLGQMIGLRVLDLSFNKLSGVIPS--------NFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNF 269 (809)
Q Consensus 200 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--------~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l 269 (809)
++..+..|.++++|+.|+|++|++++..+. .+.. ++|+.|+|++|+++..++..+.. ..++.|+|++|++
T Consensus 493 ~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l 572 (680)
T 1ziw_A 493 ANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL 572 (680)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCC
Confidence 877777788888888888888888765322 2333 78888888888888655555543 5678888888888
Q ss_pred ccCCCCCcccccccceeccccCCCCCCc---cc-cccccCCCCCCCcceeecCCC-ceeeec--CC-e---eecCCCCCC
Q 043333 270 IDGSSDSNCENQSVNLFASSSEGSNSTG---IV-SCLKSFTCPTNHSSLHINCGG-KQVIAN--GS-T---TFEDDLDAA 338 (809)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~c~~~~~~~~~~~~~~~~C~~-~~~~~~--~~-~---~~~~~~~~~ 338 (809)
+..++..+.....+..+..+.+...... .. .+.+.......+|||.|+|.+ .++..- .. . ....+..|.
T Consensus 573 ~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~C~ 652 (680)
T 1ziw_A 573 NTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCN 652 (680)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCSSCC--------------
T ss_pred CcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHHHHhcCcccccccCCcEEC
Confidence 8776665555555554444433221111 11 355667778899999999996 776531 11 1 123456788
Q ss_pred CCcce
Q 043333 339 GPSRF 343 (809)
Q Consensus 339 g~~~~ 343 (809)
+|..+
T Consensus 653 ~p~~~ 657 (680)
T 1ziw_A 653 TPPHY 657 (680)
T ss_dssp -----
T ss_pred CchHH
Confidence 88754
No 237
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.98 E-value=1.1e-32 Score=304.79 Aligned_cols=196 Identities=24% Similarity=0.441 Sum_probs=167.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeE----
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQL---- 646 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~---- 646 (809)
.++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467888999999999999999854 689999999875432 2246788999999999999999999999877654
Q ss_pred --EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCC
Q 043333 647 --LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 724 (809)
Q Consensus 647 --~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 724 (809)
++||||++ ++|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 68888772 2489999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+
T Consensus 191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 246 (371)
T 4exu_A 191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9865432 234568999999999887 688999999999999999999999997654
No 238
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.98 E-value=4.9e-32 Score=319.46 Aligned_cols=300 Identities=20% Similarity=0.155 Sum_probs=263.3
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCC-chhhcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAI-PKAVASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~i-p~~l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|++.+..+..|..+++|++|+|++|.++ .+|..+..++ |+.|++++|.+..+ |..+..+++|++|+|++|.
T Consensus 258 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 336 (606)
T 3t6q_A 258 SINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNT 336 (606)
T ss_dssp EEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCS
T ss_pred EEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCC
Confidence 3688999999888888999999999999999999 7788888875 99999999999887 5588999999999999999
Q ss_pred cccCCCc-cccCCCCCCEEEccCCccCccC--chhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCC
Q 043333 79 FSGDLPA-ELGNLINLEKLHLNSNNFTGKL--PESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPI 155 (809)
Q Consensus 79 l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 155 (809)
+.+.+|. .+..+++|++|+|++|++++.. +..+.++++|++|+|++|++.+..|..|..+++|+.|+|++|++++..
T Consensus 337 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 416 (606)
T 3t6q_A 337 KRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKD 416 (606)
T ss_dssp SCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCT
T ss_pred cccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcc
Confidence 9877765 5899999999999999999765 778999999999999999999888999999999999999999999876
Q ss_pred Cc-cccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCC---CChhhhccccccEEeccCCCCCCCCCCCC
Q 043333 156 PS-GIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGE---MPEYLGQMIGLRVLDLSFNKLSGVIPSNF 231 (809)
Q Consensus 156 p~-~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 231 (809)
|. .+..+++|+.|++++|.+....+..+.++++|++|+|++|++.+. .+..+..+++|+.|+|++|++++.+|..+
T Consensus 417 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 496 (606)
T 3t6q_A 417 AQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAF 496 (606)
T ss_dssp TCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTT
T ss_pred cchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhh
Confidence 65 489999999999999999999989999999999999999999873 44679999999999999999999999888
Q ss_pred CC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccCCCCCcccccccceeccccCCCCCCccccccccCCCCC
Q 043333 232 SG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSEGSNSTGIVSCLKSFTCPT 309 (809)
Q Consensus 232 ~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 309 (809)
.. ++|+.|+|++|++++.+|..+.. ..+ .|+|++|++++.++..+. .+.+......
T Consensus 497 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~---------------------~l~~L~~L~l 554 (606)
T 3t6q_A 497 TSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLP---------------------ILSQQRTINL 554 (606)
T ss_dssp TTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHH---------------------HHHTSSEEEC
T ss_pred ccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcc---------------------cCCCCCEEeC
Confidence 77 99999999999999999988876 455 999999999876554443 2334455677
Q ss_pred CCcceeecCCCcee
Q 043333 310 NHSSLHINCGGKQV 323 (809)
Q Consensus 310 ~~~~~~~~C~~~~~ 323 (809)
.+|||.|+|...++
T Consensus 555 ~~N~~~c~c~~~~~ 568 (606)
T 3t6q_A 555 RQNPLDCTCSNIYF 568 (606)
T ss_dssp TTCCEECSGGGHHH
T ss_pred CCCCccccCCcHHH
Confidence 89999999986654
No 239
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.98 E-value=1.1e-32 Score=326.19 Aligned_cols=204 Identities=28% Similarity=0.405 Sum_probs=170.3
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee----CCeEEEEEEecccCc-ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA----DGKVIAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLL 647 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 647 (809)
..++|+..+.||+|+||.||+|.+. .+..||||++..... ...+.|.+|+.++++++||||+++++++. .+..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 3567888999999999999999864 246799999865432 33467899999999999999999999985 46689
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 467 lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCee
Confidence 99999999999999943 234689999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCC
Q 043333 728 DEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNVICRT 783 (809)
Q Consensus 728 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~ellt-Gk~P~~~~~ 783 (809)
.............+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 597 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 65443333334557789999999999999999999999999999997 999997643
No 240
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.98 E-value=1.1e-32 Score=306.03 Aligned_cols=205 Identities=22% Similarity=0.292 Sum_probs=172.0
Q ss_pred HHHhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcC-CC-----ceEeEEeEEEeC
Q 043333 571 KAATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-HP-----NLVKLYGCCIEG 643 (809)
Q Consensus 571 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-H~-----nIv~l~~~~~~~ 643 (809)
....++|+..+.||+|+||+||+|... +++.||||+++.. ....+++..|+++++.++ |+ +|+++++++...
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 345688999999999999999999864 6889999999643 223456778888888875 54 499999999999
Q ss_pred CeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc--CCCceEEEe
Q 043333 644 NQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD--KDLNPKISD 721 (809)
Q Consensus 644 ~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~--~~~~~kl~D 721 (809)
+..++||||++ |+|.+++.... ...+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 99999999996 59999885322 23589999999999999999999953 13899999999999994 578899999
Q ss_pred cCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 722 FGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 722 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.
T Consensus 205 FG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 205 FGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp CTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999876432 2245789999999999999999999999999999999999999987543
No 241
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.98 E-value=3.1e-32 Score=321.15 Aligned_cols=208 Identities=14% Similarity=0.101 Sum_probs=139.3
Q ss_pred hhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCC-ccccCCcCCceeeeccccccCCCChhhhccccc
Q 043333 135 IQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPF-PRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGL 213 (809)
Q Consensus 135 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 213 (809)
+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+....+ ..+.++++|++|++++|.+.+..|..+..+++|
T Consensus 372 ~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 450 (606)
T 3vq2_A 372 DLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSL 450 (606)
T ss_dssp HHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred hccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCC
Confidence 333444444444444444 234556666777777777777766655 567788888888888888888888888888888
Q ss_pred cEEeccCCCCCC-CCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccCCCCCcccccccceecccc
Q 043333 214 RVLDLSFNKLSG-VIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSS 290 (809)
Q Consensus 214 ~~L~Ls~N~l~~-~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~ 290 (809)
+.|+|++|++++ .+|..+.. ++|+.|+|++|++++.+|..+.. .+++.|+|++|++++..+..++....+..+..+.
T Consensus 451 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 530 (606)
T 3vq2_A 451 NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSF 530 (606)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTT
T ss_pred CEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCC
Confidence 888888888887 46777666 89999999999999888877654 6679999999999888777777666665555444
Q ss_pred CCCC--CCcccccc-ccCCCCCCCcceeecCCCceeeec-----CCeeecCCCCCCCCcce
Q 043333 291 EGSN--STGIVSCL-KSFTCPTNHSSLHINCGGKQVIAN-----GSTTFEDDLDAAGPSRF 343 (809)
Q Consensus 291 ~~~~--~~~~~~c~-~~~~~~~~~~~~~~~C~~~~~~~~-----~~~~~~~~~~~~g~~~~ 343 (809)
+... +.....++ +.......+|||.|+|...++..- ......++..|..|..+
T Consensus 531 N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 591 (606)
T 3vq2_A 531 NRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQFLVNVEQMTCATPVEM 591 (606)
T ss_dssp SCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTTTTTSSSSBSSGGGCCCC-----
T ss_pred CcCcccCHhHhhhcccCcEEEccCCCcccCCccHHHHHHHHcCcccccCCccceeCCChHh
Confidence 4322 11122333 245667899999999998765331 11112345667777643
No 242
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.98 E-value=1e-32 Score=297.67 Aligned_cols=202 Identities=25% Similarity=0.378 Sum_probs=167.5
Q ss_pred HHHhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccC--cccchhHHHHHHHHhhcC--CCceEeEEeEEEeCCeE
Q 043333 571 KAATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQ--HPNLVKLYGCCIEGNQL 646 (809)
Q Consensus 571 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~ 646 (809)
....++|+..+.||+|+||.||++...+++.||||++.... ....+.+.+|++++.+++ ||||+++++++.+.+..
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 34567899999999999999999998889999999986543 233467889999999997 59999999999999999
Q ss_pred EEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 647 LLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 647 ~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++||| +.+++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||++++ +.+||+|||++.
T Consensus 104 ~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~ 174 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIAN 174 (313)
T ss_dssp EEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSC
T ss_pred EEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccc
Confidence 99999 668899999842 34689999999999999999999998 8999999999999975 899999999998
Q ss_pred ccCCCCcc-eeccccccccccchhhhcc-----------CCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 727 LDEEDNTH-ISTRIAGTFGYMAPEYAMR-----------GYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 727 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
........ ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (313)
T 3cek_A 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241 (313)
T ss_dssp C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence 66433221 2234568999999999865 4788899999999999999999999965
No 243
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=2.2e-32 Score=300.24 Aligned_cols=196 Identities=24% Similarity=0.443 Sum_probs=166.6
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc--ccchhHHHHHHHHhhcCCCceEeEEeEEEeCCe-----
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLYGCCIEGNQ----- 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~----- 645 (809)
.++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467888999999999999999964 689999999865422 224678899999999999999999999987654
Q ss_pred -EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCC
Q 043333 646 -LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 724 (809)
Q Consensus 646 -~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 724 (809)
.++||||++ |+|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 68888772 2489999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcceeccccccccccchhhhcc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 228 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9865432 223568999999999877 678999999999999999999999997754
No 244
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=1.7e-32 Score=296.49 Aligned_cols=202 Identities=23% Similarity=0.391 Sum_probs=167.2
Q ss_pred HhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccC--cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
..++|+..+.||+|+||.||+|.... .||||++.... ....+.|.+|++++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35678899999999999999998753 48999986542 233466888999999999999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+++++|.+++.. ....+++..+..++.|++.||+|||++ +++||||||+||+++ ++.+||+|||++.....
T Consensus 109 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp BCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred ecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999999943 234688999999999999999999998 899999999999998 67999999999875432
Q ss_pred CC----cceeccccccccccchhhhcc---------CCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 731 DN----THISTRIAGTFGYMAPEYAMR---------GYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 731 ~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
.. ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 247 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 111223458999999999864 457899999999999999999999997643
No 245
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=2e-32 Score=296.46 Aligned_cols=201 Identities=24% Similarity=0.361 Sum_probs=172.6
Q ss_pred HHHhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcc------cchhHHHHHHHHhhcC--CCceEeEEeEEE
Q 043333 571 KAATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQ------GNREFVNEIGMISALQ--HPNLVKLYGCCI 641 (809)
Q Consensus 571 ~~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~------~~~~f~~Ei~~l~~l~--H~nIv~l~~~~~ 641 (809)
....++|+..+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34567899999999999999999985 46899999998655322 2356778999999996 599999999999
Q ss_pred eCCeEEEEEEcccC-CchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCCceEE
Q 043333 642 EGNQLLLIYEYMEN-NSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKI 719 (809)
Q Consensus 642 ~~~~~~lV~ey~~~-gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kl 719 (809)
+.+..++|+||+.+ ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL 191 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKL 191 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEE
Confidence 99999999999986 899999842 34689999999999999999999998 899999999999999 7899999
Q ss_pred EecCCccccCCCCcceeccccccccccchhhhccCCC-CchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 720 SDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 720 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
+|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 192 ~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 192 IDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp CCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred eeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence 9999998765332 224568999999999887665 6889999999999999999999964
No 246
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=6.1e-32 Score=307.08 Aligned_cols=274 Identities=18% Similarity=0.150 Sum_probs=240.6
Q ss_pred CccccCCCCCccC-CccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCC-Cchh--hcCCccCcEEeec
Q 043333 1 HRILKSQNLPGRL-PPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGA-IPKA--VASISTLADLTLE 75 (809)
Q Consensus 1 ~L~L~~nnl~~~l-p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~-ip~~--l~~l~~L~~L~L~ 75 (809)
+|+|++|.+.+.+ |..|..+++|++|+|++|++++..|..|..++ |+.|++++|.+.. +|.. +..+++|++|+|+
T Consensus 58 ~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~ 137 (455)
T 3v47_A 58 FLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLR 137 (455)
T ss_dssp EEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECC
T ss_pred EEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECC
Confidence 4789999998666 56789999999999999999988899999886 9999999999876 4544 8899999999999
Q ss_pred ccccccCCCcc-ccCCCCCCEEEccCCccCccCchhhhcc----------------------------------ccccee
Q 043333 76 FNQFSGDLPAE-LGNLINLEKLHLNSNNFTGKLPESFANL----------------------------------TRLKHF 120 (809)
Q Consensus 76 ~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l----------------------------------~~L~~L 120 (809)
+|++++..|.. +.++++|++|+|++|++++..|..+..+ ++|++|
T Consensus 138 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L 217 (455)
T 3v47_A 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTL 217 (455)
T ss_dssp SSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEE
T ss_pred CCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeE
Confidence 99999877776 8999999999999999998888777655 678899
Q ss_pred eeecccccCcCchhhhcc---------------------------------------cccceEecccCcCCCCCCccccC
Q 043333 121 RISDNHFTGQIPDYIQNW---------------------------------------TKLEKLFIEGSGLAGPIPSGIAS 161 (809)
Q Consensus 121 ~Ls~N~l~~~~p~~~~~l---------------------------------------~~L~~L~L~~N~l~~~~p~~~~~ 161 (809)
+|++|++++..|..+..+ ++|+.|+|++|++++..|..+..
T Consensus 218 ~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 297 (455)
T 3v47_A 218 DLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSH 297 (455)
T ss_dssp ECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTT
T ss_pred ecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhccc
Confidence 999998887776655433 57899999999999888999999
Q ss_pred CCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEE
Q 043333 162 LVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMY 240 (809)
Q Consensus 162 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ 240 (809)
+++|+.|++++|.+..+.+..|.++++|++|+|++|.+.+..|..|..+++|+.|+|++|++++.+|..+.. ++|++|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 999999999999999998889999999999999999999999999999999999999999999998888877 9999999
Q ss_pred eeCccCCCCCChhhhh-ccCccccccCCccccCCC
Q 043333 241 LTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDGSS 274 (809)
Q Consensus 241 Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~ 274 (809)
|++|++++.++..+.. .+++.|+|++|+++|..+
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999999877776644 678999999999998654
No 247
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=3.7e-32 Score=306.98 Aligned_cols=201 Identities=27% Similarity=0.339 Sum_probs=156.9
Q ss_pred cCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEEEEcc
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYM 653 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ey~ 653 (809)
+.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 3445568899999999987666679999999986432 34678899999886 8999999999999999999999999
Q ss_pred cCCchhhhccCCCccCCC---CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC-------------Cce
Q 043333 654 ENNSLARALFGPEEHRLK---LDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKD-------------LNP 717 (809)
Q Consensus 654 ~~gsL~~~L~~~~~~~~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~-------------~~~ 717 (809)
+ |+|.+++......... ..+..+..++.||+.||+|||++ +|+||||||+|||++.+ +++
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 6999999654322211 13335678999999999999998 89999999999999754 489
Q ss_pred EEEecCCccccCCCCcc---eeccccccccccchhhhcc-------CCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 043333 718 KISDFGLAKLDEEDNTH---ISTRIAGTFGYMAPEYAMR-------GYLTDKADVYSFGIVALEIVS-GRSNVICR 782 (809)
Q Consensus 718 kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~ksDVwSlGvil~ellt-Gk~P~~~~ 782 (809)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||...
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 99999999876543321 1224579999999999965 678999999999999999999 99999653
No 248
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.9e-32 Score=295.21 Aligned_cols=201 Identities=24% Similarity=0.367 Sum_probs=163.8
Q ss_pred HHHhcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCc------ccchhHHHHHHHHhhc----CCCceEeEEeE
Q 043333 571 KAATNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSK------QGNREFVNEIGMISAL----QHPNLVKLYGC 639 (809)
Q Consensus 571 ~~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~------~~~~~f~~Ei~~l~~l----~H~nIv~l~~~ 639 (809)
....++|+..+.||+|+||.||+|.. .+++.||||++..... .....+.+|++++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34567899999999999999999985 4688999999865432 1234567899999998 89999999999
Q ss_pred EEeCCeEEEEEEc-ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCCce
Q 043333 640 CIEGNQLLLIYEY-MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNP 717 (809)
Q Consensus 640 ~~~~~~~~lV~ey-~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~ 717 (809)
+.+.+..++|+|| +++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 789999999842 34689999999999999999999998 899999999999999 88999
Q ss_pred EEEecCCccccCCCCcceeccccccccccchhhhccCCCC-chHHHHHHHHHHHHHHcCCCCCCC
Q 043333 718 KISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLT-DKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 718 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDVwSlGvil~elltGk~P~~~ 781 (809)
||+|||++....... .....||..|+|||++.+..+. .++|||||||++|||++|+.||..
T Consensus 180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 999999998765432 2345689999999998876654 589999999999999999999964
No 249
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=6e-32 Score=296.30 Aligned_cols=200 Identities=23% Similarity=0.343 Sum_probs=170.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CC-eEEEEEEecccCcccchhHHHHHHHHhhcCCCc------eEeEEeEEEeCCe
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DG-KVIAVKQLSSKSKQGNREFVNEIGMISALQHPN------LVKLYGCCIEGNQ 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g-~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~n------Iv~l~~~~~~~~~ 645 (809)
.++|+..+.||+|+||.||+|... ++ +.||||+++.. ....+.+.+|++++++++|++ ++.+.+++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468899999999999999999864 34 78999998643 233466788999999998766 8999999999999
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE--------------
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLL-------------- 711 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl-------------- 711 (809)
.++||||+ ++++.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence 99999999 56676666332 224689999999999999999999998 89999999999999
Q ss_pred -----cCCCceEEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCCc
Q 043333 712 -----DKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRTK 784 (809)
Q Consensus 712 -----~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~~ 784 (809)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 678899999999998654322 245789999999999999999999999999999999999999987543
No 250
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=4.5e-32 Score=290.24 Aligned_cols=195 Identities=29% Similarity=0.477 Sum_probs=160.8
Q ss_pred HhcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEEEe---------
Q 043333 573 ATNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIE--------- 642 (809)
Q Consensus 573 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~--------- 642 (809)
..++|+..+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567889999999999999999964 6899999998543 2335678899999999999999999999875
Q ss_pred ----CCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceE
Q 043333 643 ----GNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPK 718 (809)
Q Consensus 643 ----~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 718 (809)
.+..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 3467999999999999999953 234578889999999999999999998 899999999999999999999
Q ss_pred EEecCCccccCCCC-------------cceeccccccccccchhhhccC-CCCchHHHHHHHHHHHHHHc
Q 043333 719 ISDFGLAKLDEEDN-------------THISTRIAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVS 774 (809)
Q Consensus 719 l~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDVwSlGvil~ellt 774 (809)
|+|||++....... ........||+.|+|||.+.+. .++.++|||||||++|||++
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 99999997654221 1112345689999999998764 78999999999999999998
No 251
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=6.7e-32 Score=319.55 Aligned_cols=285 Identities=18% Similarity=0.222 Sum_probs=173.7
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCC-CCC-CCCcccCCC-------CccccccccccCCCCch--hhcCCccCc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNY-LNG-TIPSEWASL-------PLVNLPLWKQANGAIPK--AVASISTLA 70 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~-l~~-~~p~~~~~l-------~L~~L~l~~n~~~~ip~--~l~~l~~L~ 70 (809)
|+|++|++.+.+|+.|.++++|++|+|++|+ +++ .+|..+..+ .|+.|++++|.+..+|. .++++++|+
T Consensus 254 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~ 333 (636)
T 4eco_A 254 VEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLG 333 (636)
T ss_dssp EEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCC
T ss_pred EEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCC
Confidence 5666666666666666666666666666666 665 566655543 36666666666666666 666666666
Q ss_pred EEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccc-cceeeeecccccCcCchhhhccc--ccceEecc
Q 043333 71 DLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTR-LKHFRISDNHFTGQIPDYIQNWT--KLEKLFIE 147 (809)
Q Consensus 71 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~ 147 (809)
+|+|++|+++|.+| .|+.+++|++|+|++|+++ .+|..+.++++ |++|+|++|+++ .+|..+..++ +|+.|+|+
T Consensus 334 ~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls 410 (636)
T 4eco_A 334 MLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFS 410 (636)
T ss_dssp EEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECC
T ss_pred EEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECc
Confidence 66666666666666 6666666666666666666 56666666666 666666666666 5565555543 66666666
Q ss_pred cCcCCCCCCcccc-------CCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccc-------cc
Q 043333 148 GSGLAGPIPSGIA-------SLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMI-------GL 213 (809)
Q Consensus 148 ~N~l~~~~p~~~~-------~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------~L 213 (809)
+|++++.+|..+. .+++|+.|++++|.++.++...+..+++|+.|+|++|+++...+..+..+. +|
T Consensus 411 ~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L 490 (636)
T 4eco_A 411 YNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLL 490 (636)
T ss_dssp SSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGC
T ss_pred CCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCc
Confidence 6666666666665 556666666666666666655566666666666666666633333333222 66
Q ss_pred cEEeccCCCCCCCCCCCC--CCCCccEEEeeCccCCCCCChhh-hhccCccccc------cCCccccCCCCCcccccccc
Q 043333 214 RVLDLSFNKLSGVIPSNF--SGSGLTYMYLTGNLLTGPVPDWI-VRKRNKHIDL------SYNNFIDGSSDSNCENQSVN 284 (809)
Q Consensus 214 ~~L~Ls~N~l~~~~p~~~--~~~~L~~L~Ls~N~l~~~~p~~~-~~~~l~~L~L------s~N~l~~~~~~~~~~~~~~~ 284 (809)
+.|+|++|+|+.++...+ ..++|+.|+|++|++++ +|..+ ....++.|+| ++|++.+..|..++....+.
T Consensus 491 ~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~ 569 (636)
T 4eco_A 491 TSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLT 569 (636)
T ss_dssp CEEECCSSCCCBCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCC
T ss_pred cEEECcCCcCCccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCC
Confidence 666666666664333333 33666666666666666 34333 3345566666 34555555555555544444
Q ss_pred eecccc
Q 043333 285 LFASSS 290 (809)
Q Consensus 285 ~~~~~~ 290 (809)
.+..+.
T Consensus 570 ~L~Ls~ 575 (636)
T 4eco_A 570 QLQIGS 575 (636)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 443333
No 252
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=2.9e-31 Score=313.80 Aligned_cols=136 Identities=25% Similarity=0.282 Sum_probs=121.6
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCch-hhcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPK-AVASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|+|.+..|.+|.++++|++|||++|+|++..|..|..++ |+.|++++|.+..+|. .|.++++|++|+|++|+
T Consensus 56 ~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~ 135 (635)
T 4g8a_A 56 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN 135 (635)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSC
T ss_pred EEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCc
Confidence 489999999988888999999999999999999988888899986 9999999999999976 67999999999999999
Q ss_pred cccCCCccccCCCCCCEEEccCCccCc-cCchhhhcccccceeeeecccccCcCchhhh
Q 043333 79 FSGDLPAELGNLINLEKLHLNSNNFTG-KLPESFANLTRLKHFRISDNHFTGQIPDYIQ 136 (809)
Q Consensus 79 l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 136 (809)
+++..+..|+++++|++|+|++|++++ .+|..++++++|++|+|++|+|++..+..|.
T Consensus 136 l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 136 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp CCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccccc
Confidence 997777789999999999999999986 4688899999999999999998866555443
No 253
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=1e-31 Score=292.95 Aligned_cols=197 Identities=23% Similarity=0.306 Sum_probs=145.8
Q ss_pred HhcCCCCCC-eeccCCCccEEEeEee-CCeEEEEEEecccCcccchhHHHH-HHHHhhcCCCceEeEEeEEEe----CCe
Q 043333 573 ATNNFAPDN-KIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNE-IGMISALQHPNLVKLYGCCIE----GNQ 645 (809)
Q Consensus 573 ~~~~f~~~~-~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~E-i~~l~~l~H~nIv~l~~~~~~----~~~ 645 (809)
..++|.+.+ .||+|+||.||+|... +|+.||||++... ....+| ...+..++||||+++++++.. ...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 356787754 6999999999999965 6899999998543 122233 344667799999999999986 445
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCceEEEec
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDF 722 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~Df 722 (809)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 89999999999999999543 234689999999999999999999998 8999999999999976 455999999
Q ss_pred CCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 043333 723 GLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICR 782 (809)
Q Consensus 723 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~ 782 (809)
|+++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 176 g~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (336)
T 3fhr_A 176 GFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232 (336)
T ss_dssp TTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 9998654322 22456899999999998888999999999999999999999999654
No 254
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=9.1e-32 Score=303.09 Aligned_cols=198 Identities=24% Similarity=0.338 Sum_probs=157.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEEEEc
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEY 652 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ey 652 (809)
..+|...+.||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +||||+++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 34677889999999999765555678999999986432 34467899999999 799999999999999999999999
Q ss_pred ccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC-----CCceEEEecCCccc
Q 043333 653 MENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK-----DLNPKISDFGLAKL 727 (809)
Q Consensus 653 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~-----~~~~kl~DfGla~~ 727 (809)
++ |+|.+++.... ....+..+..++.||+.||+|||+. +|+||||||+|||++. ...+||+|||+++.
T Consensus 100 ~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 100 CA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 96 69999985432 2334445678999999999999998 8999999999999953 34688999999986
Q ss_pred cCCCCc--ceeccccccccccchhhhc---cCCCCchHHHHHHHHHHHHHHc-CCCCCCC
Q 043333 728 DEEDNT--HISTRIAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVS-GRSNVIC 781 (809)
Q Consensus 728 ~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~ksDVwSlGvil~ellt-Gk~P~~~ 781 (809)
...... ......+||+.|+|||++. ...++.++|||||||++|||++ |+.||..
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 643321 2233467999999999997 4567889999999999999999 9999954
No 255
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=1.1e-31 Score=291.51 Aligned_cols=203 Identities=28% Similarity=0.416 Sum_probs=150.4
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCc-ccchhHHHHHH-HHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-QGNREFVNEIG-MISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~f~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.++|+..+.||+|+||.||+|... +|+.||||++..... ....++..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367888999999999999999964 689999999875432 23345566665 677789999999999999999999999
Q ss_pred EcccCCchhhhccCC-CccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 651 EYMENNSLARALFGP-EEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 651 ey~~~gsL~~~L~~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
||+++ +|.+++... ......+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99985 787766321 112456899999999999999999999862 69999999999999999999999999997654
Q ss_pred CCCcceeccccccccccchhhh----ccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYA----MRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
.... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 178 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (327)
T 3aln_A 178 DSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred cccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 3322 2234689999999998 456789999999999999999999999965
No 256
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=303.43 Aligned_cols=272 Identities=19% Similarity=0.169 Sum_probs=253.2
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCC-chhhcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAI-PKAVASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~i-p~~l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|++.+..|..|.++++|++|+|++|+++...+..|..++ |+.|++++|.+..+ |..+..+++|++|+|++|.
T Consensus 60 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~ 139 (477)
T 2id5_A 60 ELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND 139 (477)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTT
T ss_pred EEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCc
Confidence 478999999999999999999999999999999977777788886 99999999999887 5688999999999999999
Q ss_pred cccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCcc
Q 043333 79 FSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSG 158 (809)
Q Consensus 79 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 158 (809)
+++..+..|.++++|++|+|++|++++..+..+.++++|+.|+|++|.+.+..+..|..+++|+.|+|++|.+.+.+|..
T Consensus 140 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~ 219 (477)
T 2id5_A 140 LVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPN 219 (477)
T ss_dssp CCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTT
T ss_pred cceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcc
Confidence 99888889999999999999999999887788999999999999999999888888999999999999999988888887
Q ss_pred ccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCcc
Q 043333 159 IASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLT 237 (809)
Q Consensus 159 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~ 237 (809)
.....+|+.|++++|.++.++...+.++++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..|..+.. ++|+
T Consensus 220 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 299 (477)
T 2id5_A 220 CLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLR 299 (477)
T ss_dssp TTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCC
T ss_pred cccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCC
Confidence 777789999999999999998889999999999999999999999999999999999999999999999998877 9999
Q ss_pred EEEeeCccCCCCCChhhhh-ccCccccccCCccccC
Q 043333 238 YMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 238 ~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~ 272 (809)
.|+|++|+|++..+..+.. .+++.|+|++|+|.|.
T Consensus 300 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 300 VLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp EEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred EEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 9999999999888877654 6789999999999874
No 257
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=1e-31 Score=297.00 Aligned_cols=200 Identities=23% Similarity=0.304 Sum_probs=167.0
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHHhhcC-----------CCceEeEEeEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-----------HPNLVKLYGCCI 641 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-----------H~nIv~l~~~~~ 641 (809)
.++|...+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++.+++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35788999999999999999995 46899999998643 223466788999998886 899999999998
Q ss_pred eCC----eEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-----
Q 043333 642 EGN----QLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD----- 712 (809)
Q Consensus 642 ~~~----~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~----- 712 (809)
..+ ..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+++ +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 654 789999999 889999885322 335899999999999999999999963 699999999999994
Q ss_pred -CCCceEEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 713 -KDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 713 -~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
..+.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred cCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 44589999999998664322 23568999999999999999999999999999999999999997643
No 258
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=324.72 Aligned_cols=230 Identities=17% Similarity=0.144 Sum_probs=150.0
Q ss_pred CCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccC
Q 043333 93 LEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISD 172 (809)
Q Consensus 93 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 172 (809)
|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|++++
T Consensus 268 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 347 (844)
T 3j0a_A 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347 (844)
T ss_dssp CCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCS
T ss_pred ccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCC
Confidence 44444444444444455566667777777777777777777777777788888888877777777777777888888888
Q ss_pred CCCCCCCCccccCCcCCceeeeccccccCCC----------------------------------------Chhhhcccc
Q 043333 173 LNGPEGPFPRLSNLKNMNYLILRSGNIIGEM----------------------------------------PEYLGQMIG 212 (809)
Q Consensus 173 n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~----------------------------------------p~~~~~l~~ 212 (809)
|.+..++...|.++++|+.|+|++|.+++.. +..+..+++
T Consensus 348 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~ 427 (844)
T 3j0a_A 348 NHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPH 427 (844)
T ss_dssp CCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTT
T ss_pred CCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCc
Confidence 8777777777777777777777777665421 011335566
Q ss_pred ccEEeccCCCCCCCCC------------------------------CCCCC-CCccEEEeeCccCCCCCChhhhh-ccCc
Q 043333 213 LRVLDLSFNKLSGVIP------------------------------SNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNK 260 (809)
Q Consensus 213 L~~L~Ls~N~l~~~~p------------------------------~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~ 260 (809)
|+.|+|++|++++..+ ..+.. ++|+.|+|++|.|++.+|..+.. ..++
T Consensus 428 L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 507 (844)
T 3j0a_A 428 LQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALR 507 (844)
T ss_dssp CCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCS
T ss_pred cceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhh
Confidence 6666666666654322 23444 78888999999998888877654 5678
Q ss_pred cccccCCccccCCCCCcccccccceeccccCCCCCCccccccccCCCCCCCcceeecCCCceee
Q 043333 261 HIDLSYNNFIDGSSDSNCENQSVNLFASSSEGSNSTGIVSCLKSFTCPTNHSSLHINCGGKQVI 324 (809)
Q Consensus 261 ~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~ 324 (809)
.|+|++|++++.++..+. ..+..+..+.+...........+.......+|||.|+|...++.
T Consensus 508 ~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~~~f~ 569 (844)
T 3j0a_A 508 GLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECELSTFI 569 (844)
T ss_dssp EEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSCCSHH
T ss_pred eeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccccHHHH
Confidence 889999998887766554 22222222222211111111224455678899999999876653
No 259
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=8.8e-32 Score=321.07 Aligned_cols=192 Identities=22% Similarity=0.361 Sum_probs=165.9
Q ss_pred hcCCCCCCeeccCCCccEEEeEee--CCeEEEEEEecccC-cccchhHHHHHHHHhhcCCCceEeEEeEEEeCCe-----
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA--DGKVIAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQ----- 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~--~g~~vAVK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~----- 645 (809)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.|.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 468999999999999999999965 58999999986542 2334578899999999999999999999997665
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCc
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 725 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 725 (809)
.++||||+++++|.+++.. .++|..+..++.||+.||+|||++ +|+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 7999999999999987722 689999999999999999999998 89999999999999986 8999999999
Q ss_pred cccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 726 KLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 726 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
+..... ....||+.|+|||++.++. +.++|||||||++|||++|..||..
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcc
Confidence 876433 3456999999999987765 8999999999999999999998864
No 260
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=5.4e-31 Score=311.80 Aligned_cols=282 Identities=18% Similarity=0.204 Sum_probs=252.7
Q ss_pred CccccCCCCCcc-----------------CCccCC--CCCCCCEEEccCCCCCCCCCcccCCCC-cccccccccc-CC--
Q 043333 1 HRILKSQNLPGR-----------------LPPELT--RLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQA-NG-- 57 (809)
Q Consensus 1 ~L~L~~nnl~~~-----------------lp~~l~--~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~-~~-- 57 (809)
+|+|++|++.+. +|+.+. ++++|++|+|++|.+.+.+|..+..++ |+.|++++|. +.
T Consensus 210 ~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~ 289 (636)
T 4eco_A 210 QFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGE 289 (636)
T ss_dssp EEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHH
T ss_pred EEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccc
Confidence 478999999986 999999 999999999999999999999999996 9999999997 76
Q ss_pred CCchhhcCC------ccCcEEeecccccccCCCc--cccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccC
Q 043333 58 AIPKAVASI------STLADLTLEFNQFSGDLPA--ELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTG 129 (809)
Q Consensus 58 ~ip~~l~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 129 (809)
.+|..++.+ ++|++|+|++|+++ .+|. .++++++|++|+|++|+++|.+| .++++++|+.|+|++|+++
T Consensus 290 ~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~- 366 (636)
T 4eco_A 290 QLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT- 366 (636)
T ss_dssp HHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-
T ss_pred cchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-
Confidence 599998887 99999999999999 8898 99999999999999999999999 9999999999999999999
Q ss_pred cCchhhhcccc-cceEecccCcCCCCCCccccCCC--CCCEEeccCCCCCCCCCcccc-------CCcCCceeeeccccc
Q 043333 130 QIPDYIQNWTK-LEKLFIEGSGLAGPIPSGIASLV--ELTDLRISDLNGPEGPFPRLS-------NLKNMNYLILRSGNI 199 (809)
Q Consensus 130 ~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~l~~n~l~~~~~~~l~-------~l~~L~~L~Ls~N~l 199 (809)
.+|..+.++++ |+.|+|++|+++ .+|..+..+. +|+.|++++|.+....+..+. .+++|+.|+|++|++
T Consensus 367 ~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l 445 (636)
T 4eco_A 367 EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQI 445 (636)
T ss_dssp ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCC
T ss_pred cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCcc
Confidence 89999999999 999999999999 8898887765 999999999999998888887 888999999999999
Q ss_pred cCCCChhhhccccccEEeccCCCCCCCCCCCCCCC--------CccEEEeeCccCCCCCChhh---hhccCccccccCCc
Q 043333 200 IGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGS--------GLTYMYLTGNLLTGPVPDWI---VRKRNKHIDLSYNN 268 (809)
Q Consensus 200 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--------~L~~L~Ls~N~l~~~~p~~~---~~~~l~~L~Ls~N~ 268 (809)
....+..+..+++|+.|+|++|+|+.+++..+... +|+.|+|++|+++ .+|..+ ....++.|+|++|+
T Consensus 446 ~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 524 (636)
T 4eco_A 446 SKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNS 524 (636)
T ss_dssp CSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSC
T ss_pred CcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCC
Confidence 97666677889999999999999997666666543 9999999999999 566555 45788999999999
Q ss_pred cccCCCCCcccccccceecc
Q 043333 269 FIDGSSDSNCENQSVNLFAS 288 (809)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~ 288 (809)
+++ .|..+.....+..+..
T Consensus 525 l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 525 FSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp CSS-CCCGGGGCSSCCEEEC
T ss_pred CCC-cChhhhcCCCCCEEEC
Confidence 998 5666666666655544
No 261
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=1.1e-31 Score=292.79 Aligned_cols=191 Identities=21% Similarity=0.233 Sum_probs=161.5
Q ss_pred hcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCc--------ccchhHHHHHHHHhhcC---------CCceEeE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSK--------QGNREFVNEIGMISALQ---------HPNLVKL 636 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~--------~~~~~f~~Ei~~l~~l~---------H~nIv~l 636 (809)
.++|+..+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45688899999999999999987 689999999975532 12367889999998886 8888888
Q ss_pred EeEEE------------------------------eCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHH
Q 043333 637 YGCCI------------------------------EGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLAR 686 (809)
Q Consensus 637 ~~~~~------------------------------~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~ 686 (809)
.+.+. +.+..++||||+++|++.+.+. +..+++..+..++.|++.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHHH
Confidence 87754 2678999999999998777662 245799999999999999
Q ss_pred HHHHHH-hCCCCCeEEcCCCCCCEEEcCCC--------------------ceEEEecCCccccCCCCcceeccccccccc
Q 043333 687 GLAYLH-EESRLKIVHRDIKATNVLLDKDL--------------------NPKISDFGLAKLDEEDNTHISTRIAGTFGY 745 (809)
Q Consensus 687 ~L~yLH-~~~~~~iiH~Dlkp~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y 745 (809)
||+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ..+||+.|
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 77 899999999999999887 8999999999866432 24799999
Q ss_pred cchhhhccCCCCchHHHHHHHHH-HHHHHcCCCCCC
Q 043333 746 MAPEYAMRGYLTDKADVYSFGIV-ALEIVSGRSNVI 780 (809)
Q Consensus 746 ~aPE~~~~~~~~~ksDVwSlGvi-l~elltGk~P~~ 780 (809)
+|||++.+.. +.++||||++++ .+++++|..||.
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 9999998766 899999998776 778899999984
No 262
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=286.65 Aligned_cols=200 Identities=27% Similarity=0.430 Sum_probs=149.6
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc-cc-hhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ-GN-REFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~-~~-~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.++|+..+.||+|+||.||+|... +|+.||||++...... .. +.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356788899999999999999975 6899999998754322 22 33444556788889999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||+ ++.+..+.. .....+++..+..++.|++.||+|||++. +++||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~-~~~~~~l~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 104 ELM-GTCAEKLKK---RMQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CCC-SEEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecc-CCcHHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999 444544442 12356899999999999999999999831 799999999999999999999999999976543
Q ss_pred CCcceeccccccccccchhhhc-----cCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAM-----RGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
... .....||+.|+|||.+. ...++.++|||||||++|||++|+.||..
T Consensus 178 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 178 DKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred Ccc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 222 23456899999999984 55788999999999999999999999975
No 263
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=1.2e-31 Score=312.19 Aligned_cols=202 Identities=30% Similarity=0.458 Sum_probs=171.7
Q ss_pred hcCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEeccc-CcccchhHHHHHHHHhhcCCCceEeEEeEEEe------CCe
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLYGCCIE------GNQ 645 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~------~~~ 645 (809)
.++|+..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999986 46899999998654 23335678999999999999999999998765 567
Q ss_pred EEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCc---eEEEec
Q 043333 646 LLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDF 722 (809)
Q Consensus 646 ~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~Df 722 (809)
.++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 899999999999999996532 233588889999999999999999998 8999999999999997765 899999
Q ss_pred CCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 723 GLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 723 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
|++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 169 G~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 169 GYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 99987654332 2346789999999999999999999999999999999999999954
No 264
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=8.3e-31 Score=316.35 Aligned_cols=266 Identities=19% Similarity=0.214 Sum_probs=176.1
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEc-cCCCCCCCCCcc---------------------------------------
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDL-TRNYLNGTIPSE--------------------------------------- 40 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~L-s~n~l~~~~p~~--------------------------------------- 40 (809)
+|+|++|++.|.+|++|++|++|++|+| ++|.+.+..|-.
T Consensus 327 ~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~ 406 (876)
T 4ecn_A 327 GLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQD 406 (876)
T ss_dssp EEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred EEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHH
Confidence 4789999999999999999999999999 888765542211
Q ss_pred -------------cCCCCccccccc--cccCCCCchhhcCCccCcEEeeccccccc-----------------CCCcccc
Q 043333 41 -------------WASLPLVNLPLW--KQANGAIPKAVASISTLADLTLEFNQFSG-----------------DLPAELG 88 (809)
Q Consensus 41 -------------~~~l~L~~L~l~--~n~~~~ip~~l~~l~~L~~L~L~~N~l~~-----------------~~p~~~~ 88 (809)
...+.++.+.+. .|.+..||..++++++|+.|+|++|+|++ .+|..++
T Consensus 407 ~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~ 486 (876)
T 4ecn_A 407 AINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELS 486 (876)
T ss_dssp HHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCC
T ss_pred HhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhh
Confidence 001112223332 24444477777777777777777777776 2666665
Q ss_pred --CCCCCCEEEccCCccCccCchhhhcccccceeeeeccc-ccC-cCchhhhccc-------ccceEecccCcCCCCCCc
Q 043333 89 --NLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNH-FTG-QIPDYIQNWT-------KLEKLFIEGSGLAGPIPS 157 (809)
Q Consensus 89 --~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~ 157 (809)
++++|++|+|++|++.+.+|..|+++++|+.|+|++|+ +++ .+|..+++++ +|+.|+|++|+++ .+|.
T Consensus 487 f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~ 565 (876)
T 4ecn_A 487 WSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPA 565 (876)
T ss_dssp GGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCC
T ss_pred hccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCC
Confidence 77777777777777777777777777777777777776 666 6676666655 7777777777777 6666
Q ss_pred --cccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhcccc-ccEEeccCCCCCCCCCCCCCC-
Q 043333 158 --GIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIG-LRVLDLSFNKLSGVIPSNFSG- 233 (809)
Q Consensus 158 --~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~- 233 (809)
.|..+++|+.|++++|.+..++ .|.++++|+.|+|++|++. .+|..+..+++ |+.|+|++|+|+ .+|..+..
T Consensus 566 ~~~l~~L~~L~~L~Ls~N~l~~lp--~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~ 641 (876)
T 4ecn_A 566 SASLQKMVKLGLLDCVHNKVRHLE--AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAK 641 (876)
T ss_dssp HHHHTTCTTCCEEECTTSCCCBCC--CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTT
T ss_pred hhhhhcCCCCCEEECCCCCcccch--hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhcc
Confidence 6777777777777777776444 6677777777777777776 66666777776 777777777776 34444433
Q ss_pred --CCccEEEeeCccCCCCCChhh------hhccCccccccCCcccc
Q 043333 234 --SGLTYMYLTGNLLTGPVPDWI------VRKRNKHIDLSYNNFID 271 (809)
Q Consensus 234 --~~L~~L~Ls~N~l~~~~p~~~------~~~~l~~L~Ls~N~l~~ 271 (809)
++|+.|+|++|++++.+|... ...+++.|+|++|+++.
T Consensus 642 ~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~ 687 (876)
T 4ecn_A 642 SVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK 687 (876)
T ss_dssp CSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS
T ss_pred ccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc
Confidence 236666666666666554322 11244555556655553
No 265
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=1.1e-30 Score=281.74 Aligned_cols=231 Identities=22% Similarity=0.326 Sum_probs=216.2
Q ss_pred CccccccccccCC---CCchhhcCCccCcEEeecc-cccccCCCccccCCCCCCEEEccCCccCccCchhhhccccccee
Q 043333 45 PLVNLPLWKQANG---AIPKAVASISTLADLTLEF-NQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHF 120 (809)
Q Consensus 45 ~L~~L~l~~n~~~---~ip~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 120 (809)
.++.|++++|.+. .+|..+.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 5889999999997 5899999999999999995 99999999999999999999999999999999999999999999
Q ss_pred eeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCC-CCCEEeccCCCCCCCCCccccCCcCCceeeeccccc
Q 043333 121 RISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLV-ELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNI 199 (809)
Q Consensus 121 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l 199 (809)
+|++|++++.+|..+..+++|++|+|++|++++.+|..+..++ +|+.|++++|.+....+..+..++ |+.|+|++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 9999999999999999999999999999999999999999998 999999999999988888898887 99999999999
Q ss_pred cCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccCCCCC
Q 043333 200 IGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDGSSDS 276 (809)
Q Consensus 200 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~ 276 (809)
.+..|..|..+++|+.|+|++|++++.+|.....++|++|+|++|++++.+|..+.. ..++.|+|++|++++..|..
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 999999999999999999999999998888544599999999999999999988865 57799999999999766643
No 266
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=1.9e-30 Score=288.90 Aligned_cols=292 Identities=17% Similarity=0.098 Sum_probs=199.6
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCch-hhcCCccCcEEeeccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPK-AVASISTLADLTLEFNQF 79 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~l 79 (809)
|++++|.+....+..+..+++|++|+|++|.++...+..|..++ |+.|++++|.+..+|. .+..+++|++|+|++|++
T Consensus 50 l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 129 (390)
T 3o6n_A 50 VTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 129 (390)
T ss_dssp EEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCcc
Confidence 44555555533333356666666666666666655555666654 6666666666666643 456666666666666666
Q ss_pred ccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhccc-------------------c
Q 043333 80 SGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWT-------------------K 140 (809)
Q Consensus 80 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------------------~ 140 (809)
+...+..|.++++|++|+|++|++++..|..+.++++|++|+|++|++++.. +..++ +
T Consensus 130 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~ 206 (390)
T 3o6n_A 130 SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIA 206 (390)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSS
T ss_pred CcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCc
Confidence 6333334566666666666666666655656666666666666666666432 23333 4
Q ss_pred cceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccC
Q 043333 141 LEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSF 220 (809)
Q Consensus 141 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (809)
|+.|++++|+++.. |.. ..++|+.|++++|.++.. +.+..+++|++|+|++|.+.+..|..|..+++|+.|+|++
T Consensus 207 L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (390)
T 3o6n_A 207 VEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 281 (390)
T ss_dssp CSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCS
T ss_pred ceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCC
Confidence 55555555555532 222 246888999999988875 5788999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhhccCccccccCCccccCCCCCcccccccceeccccCCCCCCcccc
Q 043333 221 NKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSEGSNSTGIVS 300 (809)
Q Consensus 221 N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (809)
|++++.+......++|+.|+|++|++++.++......+++.|+|++|+++..+.. .
T Consensus 282 n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i~~~~~~------------------------~ 337 (390)
T 3o6n_A 282 NRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLS------------------------T 337 (390)
T ss_dssp SCCCEEECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCCCCC------------------------T
T ss_pred CcCcccCcccCCCCCCCEEECCCCcceecCccccccCcCCEEECCCCccceeCch------------------------h
Confidence 9999876555445899999999999996655554557889999999998764321 2
Q ss_pred ccccCCCCCCCcceeecCCCceeee
Q 043333 301 CLKSFTCPTNHSSLHINCGGKQVIA 325 (809)
Q Consensus 301 c~~~~~~~~~~~~~~~~C~~~~~~~ 325 (809)
+++.......+|+|.|+|....+..
T Consensus 338 ~~~L~~L~l~~N~~~~~~~~~~~~~ 362 (390)
T 3o6n_A 338 HHTLKNLTLSHNDWDCNSLRALFRN 362 (390)
T ss_dssp TCCCSEEECCSSCEEHHHHHHHTTT
T ss_pred hccCCEEEcCCCCccchhHHHHHHH
Confidence 3344556678999999996655443
No 267
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=3e-30 Score=300.43 Aligned_cols=318 Identities=16% Similarity=0.115 Sum_probs=211.6
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchh-hcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKA-VASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~-l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|++.+..|..|..+++|++|+|++|++++..|..|..++ |+.|++++|.+..+|.. ++.+++|++|+|++|.
T Consensus 30 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 109 (549)
T 2z81_A 30 SLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNP 109 (549)
T ss_dssp EEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCC
T ss_pred EEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCc
Confidence 478999999988888999999999999999999988888888886 99999999999888764 8999999999999999
Q ss_pred ccc-CCCccccCCCCCCEEEccCCccCccC-chhhhcccccceeeeecccccCcCchhhhc-------------------
Q 043333 79 FSG-DLPAELGNLINLEKLHLNSNNFTGKL-PESFANLTRLKHFRISDNHFTGQIPDYIQN------------------- 137 (809)
Q Consensus 79 l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------------------- 137 (809)
+++ ..|..++++++|++|+|++|++.+.+ +..|.++++|++|+|++|++++..|..+..
T Consensus 110 l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 189 (549)
T 2z81_A 110 YQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLE 189 (549)
T ss_dssp CSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHH
T ss_pred ccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccch
Confidence 986 35678888999999999998844344 467888888888888888888777666543
Q ss_pred -----ccccceEecccCcCCCC----------------------------------------------------------
Q 043333 138 -----WTKLEKLFIEGSGLAGP---------------------------------------------------------- 154 (809)
Q Consensus 138 -----l~~L~~L~L~~N~l~~~---------------------------------------------------------- 154 (809)
+++|+.|+|++|++++.
T Consensus 190 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~ 269 (549)
T 2z81_A 190 IFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDF 269 (549)
T ss_dssp HHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCC
T ss_pred hhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccc
Confidence 45666666666666542
Q ss_pred -------------------------------------------------------CCccc-cCCCCCCEEeccCCCCCCC
Q 043333 155 -------------------------------------------------------IPSGI-ASLVELTDLRISDLNGPEG 178 (809)
Q Consensus 155 -------------------------------------------------------~p~~~-~~l~~L~~L~l~~n~l~~~ 178 (809)
+|..+ ..+++|+.|++++|.+...
T Consensus 270 ~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~ 349 (549)
T 2z81_A 270 NPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEE 349 (549)
T ss_dssp CCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHH
T ss_pred cccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccc
Confidence 11111 2345555555555555442
Q ss_pred CC---ccccCCcCCceeeeccccccCCCC--hhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChh
Q 043333 179 PF---PRLSNLKNMNYLILRSGNIIGEMP--EYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDW 253 (809)
Q Consensus 179 ~~---~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~ 253 (809)
.+ ..+..+++|++|+|++|++++..+ ..+..+++|+.|+|++|+++.+++.....++|++|+|++|+++......
T Consensus 350 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~ 429 (549)
T 2z81_A 350 YLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCI 429 (549)
T ss_dssp HHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSCCCTTS
T ss_pred cccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCcccccchh
Confidence 21 124455666666666666655432 4467777777777777777754333222266666666666665322211
Q ss_pred h------------------hhccCccccccCCccccCCCCCcccccccceeccccC---CCCCCccccccccCCCCCCCc
Q 043333 254 I------------------VRKRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSE---GSNSTGIVSCLKSFTCPTNHS 312 (809)
Q Consensus 254 ~------------------~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~c~~~~~~~~~~~ 312 (809)
. ....++.|+|++|+++..+.. .....+..+..+.+ ...+.....+.+.......+|
T Consensus 430 ~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~ip~~--~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 507 (549)
T 2z81_A 430 PQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDA--SLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTN 507 (549)
T ss_dssp CTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCG--GGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSS
T ss_pred cCCceEEECCCCChhhhcccCChhcEEECCCCccCcCCCc--ccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCC
Confidence 1 123556677777777644321 22222333322222 222223345566677789999
Q ss_pred ceeecCCC
Q 043333 313 SLHINCGG 320 (809)
Q Consensus 313 ~~~~~C~~ 320 (809)
||.|+|..
T Consensus 508 ~~~~~~~~ 515 (549)
T 2z81_A 508 PWDCSCPR 515 (549)
T ss_dssp CBCCCHHH
T ss_pred CccCCCcc
Confidence 99999974
No 268
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=304.08 Aligned_cols=338 Identities=19% Similarity=0.181 Sum_probs=209.4
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCc-hhhcCCccCcEEeeccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIP-KAVASISTLADLTLEFNQF 79 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l 79 (809)
|+|++|++.+..+..|..+++|++|+|++|++++..|..|..++ |+.|++++|.+..+| ..|..+++|++|+|++|++
T Consensus 33 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 112 (570)
T 2z63_A 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112 (570)
T ss_dssp EECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccccc
Confidence 56666666666666666666677777766666665566666654 666666666666554 4556666666666666666
Q ss_pred ccCCCccccCCCCCCEEEccCCccCc-cCchhhhcccccceeeeecccccCcCchhhhc---------------------
Q 043333 80 SGDLPAELGNLINLEKLHLNSNNFTG-KLPESFANLTRLKHFRISDNHFTGQIPDYIQN--------------------- 137 (809)
Q Consensus 80 ~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------------------- 137 (809)
++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..++.
T Consensus 113 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~ 192 (570)
T 2z63_A 113 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI 192 (570)
T ss_dssp CCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEE
T ss_pred ccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceec
Confidence 64333345666666666666666654 24555666666666666655554433332222
Q ss_pred --------------------------------------------------------------------------------
Q 043333 138 -------------------------------------------------------------------------------- 137 (809)
Q Consensus 138 -------------------------------------------------------------------------------- 137 (809)
T Consensus 193 ~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~ 272 (570)
T 2z63_A 193 QPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLD 272 (570)
T ss_dssp CTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEES
T ss_pred CHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhh
Confidence
Q ss_pred --------ccccceEecccCcCCCCCCccc------------------------------------------cCCCCCCE
Q 043333 138 --------WTKLEKLFIEGSGLAGPIPSGI------------------------------------------ASLVELTD 167 (809)
Q Consensus 138 --------l~~L~~L~L~~N~l~~~~p~~~------------------------------------------~~l~~L~~ 167 (809)
+++|+.|++++|.++ .+|..+ ..+++|+.
T Consensus 273 ~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~ 351 (570)
T 2z63_A 273 DIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEF 351 (570)
T ss_dssp CSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCE
T ss_pred hchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCE
Confidence 233333333333333 122111 23344455
Q ss_pred EeccCCCCC--------------------------CCCCccccCCcCCceeeeccccccCCCC-hhhhccccccEEeccC
Q 043333 168 LRISDLNGP--------------------------EGPFPRLSNLKNMNYLILRSGNIIGEMP-EYLGQMIGLRVLDLSF 220 (809)
Q Consensus 168 L~l~~n~l~--------------------------~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~ 220 (809)
|++++|.+. .++.. +..+++|+.|++++|.+.+..| ..+..+++|+.|+|++
T Consensus 352 L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 430 (570)
T 2z63_A 352 LDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 430 (570)
T ss_dssp EECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTT
T ss_pred EeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcC
Confidence 555555443 33322 6677778888888888877766 5678888888888888
Q ss_pred CCCCCCCCCCCCC-CCccEEEeeCccCC-CCCChhhhh-ccCccccccCCccccCCCCCcccccccceeccccCC---CC
Q 043333 221 NKLSGVIPSNFSG-SGLTYMYLTGNLLT-GPVPDWIVR-KRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSEG---SN 294 (809)
Q Consensus 221 N~l~~~~p~~~~~-~~L~~L~Ls~N~l~-~~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~---~~ 294 (809)
|++++.+|..+.. ++|+.|+|++|.++ +.+|..+.. ..++.|+|++|++++..+..+.....+..+..+.+. ..
T Consensus 431 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 510 (570)
T 2z63_A 431 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510 (570)
T ss_dssp SCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCC
Confidence 8888888887776 88999999999887 466665544 567889999999988877777665555554443332 22
Q ss_pred CCccccccccCCCCCCCcceeecCCCceee-e---cCCeeecCCCCCCCCc
Q 043333 295 STGIVSCLKSFTCPTNHSSLHINCGGKQVI-A---NGSTTFEDDLDAAGPS 341 (809)
Q Consensus 295 ~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~-~---~~~~~~~~~~~~~g~~ 341 (809)
......|++.......+|+|.|+|...++. . .......+...|.+|.
T Consensus 511 ~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~~C~~~~ 561 (570)
T 2z63_A 511 DGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSG 561 (570)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCCBBTTTC
T ss_pred HHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCchhhCCCC
Confidence 233445677778889999999999876653 1 1222333334676664
No 269
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.97 E-value=3.3e-30 Score=274.32 Aligned_cols=173 Identities=11% Similarity=0.029 Sum_probs=150.2
Q ss_pred hcCCCCCCeeccCCCccEEEeEee-CCeEEEEEEecccCcc---cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 574 TNNFAPDNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSKQ---GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 574 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~---~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
.++|+..+.||+|+||.||+|... +++.||||++...... ..+.|.+|++++.+++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 357888999999999999999965 4899999999765332 236789999999999999999999999999999999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++++|.+++.. . .....+..++.|++.||+|||++ +|+||||||+|||++.++.+||+++
T Consensus 110 ~e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~------- 173 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP------- 173 (286)
T ss_dssp EECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC-------
T ss_pred EEecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec-------
Confidence 999999999999832 1 34557888999999999999998 8999999999999999999999744
Q ss_pred CCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Q 043333 730 EDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVICRT 783 (809)
Q Consensus 730 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~~~ 783 (809)
+|++| ++.++|||||||++|||+||+.||...+
T Consensus 174 --------------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~ 206 (286)
T 3uqc_A 174 --------------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAG 206 (286)
T ss_dssp --------------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred --------------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 34443 6889999999999999999999997644
No 270
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.8e-29 Score=274.48 Aligned_cols=261 Identities=23% Similarity=0.250 Sum_probs=226.3
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCC-chhhcCCccCcEEeeccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAI-PKAVASISTLADLTLEFNQF 79 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~i-p~~l~~l~~L~~L~L~~N~l 79 (809)
++++++++. .+|..+. ++|++|+|++|++++..+..|..++ |+.|++++|.+..+ |..+..+++|++|+|++|++
T Consensus 36 l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (330)
T 1xku_A 36 VQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 112 (330)
T ss_dssp EECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcC
Confidence 567777777 6777665 6899999999999988787888886 99999999999888 77899999999999999999
Q ss_pred ccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccC--cCchhhhcccccceEecccCcCCCCCCc
Q 043333 80 SGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTG--QIPDYIQNWTKLEKLFIEGSGLAGPIPS 157 (809)
Q Consensus 80 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 157 (809)
+ .+|..+. ++|++|++++|++++..+..+.++++|+.|+|++|.+.. ..+..+.++++|+.|++++|+++ .+|.
T Consensus 113 ~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~ 188 (330)
T 1xku_A 113 K-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ 188 (330)
T ss_dssp S-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCS
T ss_pred C-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCc
Confidence 9 6666554 799999999999998888889999999999999999963 67888999999999999999999 4666
Q ss_pred cccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCcc
Q 043333 158 GIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLT 237 (809)
Q Consensus 158 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~ 237 (809)
.+. ++|+.|++++|.++.+.+..+.++++|+.|+|++|.+.+..+..|..+++|+.|+|++|+++.++......++|+
T Consensus 189 ~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~ 266 (330)
T 1xku_A 189 GLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQ 266 (330)
T ss_dssp SCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCC
T ss_pred ccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcC
Confidence 554 899999999999999988999999999999999999999999899999999999999999996555444449999
Q ss_pred EEEeeCccCCCCCChhhhh-------ccCccccccCCcccc
Q 043333 238 YMYLTGNLLTGPVPDWIVR-------KRNKHIDLSYNNFID 271 (809)
Q Consensus 238 ~L~Ls~N~l~~~~p~~~~~-------~~l~~L~Ls~N~l~~ 271 (809)
.|+|++|++++..+..+.. ..++.|++++|++..
T Consensus 267 ~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 267 VVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp EEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred EEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 9999999999887776642 355789999999864
No 271
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=4.4e-30 Score=302.00 Aligned_cols=291 Identities=18% Similarity=0.104 Sum_probs=203.8
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCch-hhcCCccCcEEeeccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPK-AVASISTLADLTLEFNQF 79 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~l 79 (809)
|++++|.+....+..+..+++|++|+|++|.+++..|..|..++ |+.|++++|.+..+|. .++++++|++|+|++|.+
T Consensus 56 l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 135 (597)
T 3oja_B 56 VTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 135 (597)
T ss_dssp EEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCC
Confidence 34555666544444456677777777777777766666666664 6777777777766654 456677777777777777
Q ss_pred ccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccc-------------------
Q 043333 80 SGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTK------------------- 140 (809)
Q Consensus 80 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~------------------- 140 (809)
++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.. +..+++
T Consensus 136 ~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~ 212 (597)
T 3oja_B 136 SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIA 212 (597)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTT
T ss_pred CCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCch
Confidence 7444445667777777777777777666666777777777777777776442 333444
Q ss_pred cceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccC
Q 043333 141 LEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSF 220 (809)
Q Consensus 141 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (809)
|+.|++++|.++.. +..+ .++|+.|++++|.++.. ..+..+++|+.|+|++|.+.+..|..|..+++|+.|+|++
T Consensus 213 L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 287 (597)
T 3oja_B 213 VEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 287 (597)
T ss_dssp CSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTT
T ss_pred hheeeccCCccccc-cccc--CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCC
Confidence 45555555555422 2111 25788888888888764 6788999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhhccCccccccCCccccCCCCCcccccccceeccccCCCCCCcccc
Q 043333 221 NKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSEGSNSTGIVS 300 (809)
Q Consensus 221 N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (809)
|+++++++.....++|+.|+|++|.+++.++......+++.|+|++|+++..+.. .
T Consensus 288 N~l~~l~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~l~~L~~L~L~~N~l~~~~~~------------------------~ 343 (597)
T 3oja_B 288 NRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLS------------------------T 343 (597)
T ss_dssp SCCCEEECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCCCCC------------------------T
T ss_pred CCCCCCCcccccCCCCcEEECCCCCCCccCcccccCCCCCEEECCCCCCCCcChh------------------------h
Confidence 9999875555445899999999999996554544557889999999998764321 2
Q ss_pred ccccCCCCCCCcceeecCCCceee
Q 043333 301 CLKSFTCPTNHSSLHINCGGKQVI 324 (809)
Q Consensus 301 c~~~~~~~~~~~~~~~~C~~~~~~ 324 (809)
++........+|||.|+|...++.
T Consensus 344 ~~~L~~L~l~~N~~~~~~~~~~~~ 367 (597)
T 3oja_B 344 HHTLKNLTLSHNDWDCNSLRALFR 367 (597)
T ss_dssp TCCCSEEECCSSCEEHHHHHHHTT
T ss_pred cCCCCEEEeeCCCCCChhHHHHHH
Confidence 334455667899999999655543
No 272
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=5.6e-30 Score=301.86 Aligned_cols=270 Identities=20% Similarity=0.251 Sum_probs=248.1
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCC-CCch-hhcCCccCcEEeeccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANG-AIPK-AVASISTLADLTLEFN 77 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~-~ip~-~l~~l~~L~~L~L~~N 77 (809)
+|+|++|++. .+|+.+..+++|++|++++|.+.+..|..+..++ |+.|++++|.+. .+|. .+..+++|++|+|++|
T Consensus 282 ~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 360 (606)
T 3t6q_A 282 ELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHD 360 (606)
T ss_dssp EEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSS
T ss_pred EEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCC
Confidence 4789999998 8999999999999999999999988888888886 999999999876 6766 5899999999999999
Q ss_pred ccccCC--CccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchh-hhcccccceEecccCcCCCC
Q 043333 78 QFSGDL--PAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDY-IQNWTKLEKLFIEGSGLAGP 154 (809)
Q Consensus 78 ~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~ 154 (809)
.+++.. +..+..+++|++|+|++|++++..|..|.++++|+.|+|++|++.+..|.. +.++++|+.|+|++|.+++.
T Consensus 361 ~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 440 (606)
T 3t6q_A 361 DIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDIS 440 (606)
T ss_dssp CCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTT
T ss_pred ccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCc
Confidence 999765 778999999999999999999999999999999999999999999876654 89999999999999999999
Q ss_pred CCccccCCCCCCEEeccCCCCCCC---CCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCC
Q 043333 155 IPSGIASLVELTDLRISDLNGPEG---PFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNF 231 (809)
Q Consensus 155 ~p~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 231 (809)
.|..+..+++|+.|++++|.+... ....+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++.+|..+
T Consensus 441 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 520 (606)
T 3t6q_A 441 SEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEAL 520 (606)
T ss_dssp CTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGG
T ss_pred CHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHh
Confidence 999999999999999999999863 23568999999999999999999999999999999999999999999999988
Q ss_pred CC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccC
Q 043333 232 SG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 232 ~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~ 272 (809)
.. ++| .|+|++|++++.+|..+.. ..++.|++++|+|.|.
T Consensus 521 ~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 521 SHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp TTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred Cccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 87 899 9999999999999887765 6789999999999984
No 273
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=1.7e-29 Score=305.03 Aligned_cols=282 Identities=18% Similarity=0.185 Sum_probs=242.5
Q ss_pred CccccCCCCCc-----------------cCCccCC--CCCCCCEEEccCCCCCCCCCcccCCCC-cccccccccc-CC--
Q 043333 1 HRILKSQNLPG-----------------RLPPELT--RLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQA-NG-- 57 (809)
Q Consensus 1 ~L~L~~nnl~~-----------------~lp~~l~--~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~-~~-- 57 (809)
+|+|++|++.+ .+|+.++ ++++|++|+|++|.+.+.+|..|..++ |+.|++++|. +.
T Consensus 452 ~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~ 531 (876)
T 4ecn_A 452 IIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAA 531 (876)
T ss_dssp EEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHH
T ss_pred EEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccc
Confidence 47899999998 4999998 999999999999999999999999996 9999999997 76
Q ss_pred CCchhhcCCc-------cCcEEeecccccccCCCc--cccCCCCCCEEEccCCccCccCchhhhcccccceeeeeccccc
Q 043333 58 AIPKAVASIS-------TLADLTLEFNQFSGDLPA--ELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFT 128 (809)
Q Consensus 58 ~ip~~l~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 128 (809)
.+|..++.++ +|+.|+|++|+++ .+|. .|+++++|++|+|++|+++ .+| .|+++++|+.|+|++|+++
T Consensus 532 ~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 532 QLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp HHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS
T ss_pred cchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc
Confidence 4898887776 9999999999999 8888 9999999999999999999 888 9999999999999999999
Q ss_pred CcCchhhhcccc-cceEecccCcCCCCCCccccCCCC--CCEEeccCCCCCCCCCc---ccc--CCcCCceeeecccccc
Q 043333 129 GQIPDYIQNWTK-LEKLFIEGSGLAGPIPSGIASLVE--LTDLRISDLNGPEGPFP---RLS--NLKNMNYLILRSGNII 200 (809)
Q Consensus 129 ~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~l~~n~l~~~~~~---~l~--~l~~L~~L~Ls~N~l~ 200 (809)
.+|..+.++++ |+.|+|++|+++ .+|..+..+.. |+.|++++|.+....+. .+. .+++|+.|+|++|++.
T Consensus 609 -~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~ 686 (876)
T 4ecn_A 609 -EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ 686 (876)
T ss_dssp -CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC
T ss_pred -cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC
Confidence 89999999999 999999999999 88988877755 99999999999775432 222 4458999999999999
Q ss_pred CCCChhhhccccccEEeccCCCCCCCCCCCCCCC--------CccEEEeeCccCCCCCChhh---hhccCccccccCCcc
Q 043333 201 GEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGS--------GLTYMYLTGNLLTGPVPDWI---VRKRNKHIDLSYNNF 269 (809)
Q Consensus 201 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--------~L~~L~Ls~N~l~~~~p~~~---~~~~l~~L~Ls~N~l 269 (809)
...+..+..+++|+.|+|++|+|+.+++..+... +|+.|+|++|+|+ .+|..+ ...+++.|+|++|++
T Consensus 687 ~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L 765 (876)
T 4ecn_A 687 KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCF 765 (876)
T ss_dssp SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCC
T ss_pred ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCC
Confidence 6555556689999999999999997776666543 8999999999999 566655 457889999999999
Q ss_pred ccCCCCCcccccccceeccc
Q 043333 270 IDGSSDSNCENQSVNLFASS 289 (809)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~ 289 (809)
++ .|..+.....+..+..+
T Consensus 766 ~~-lp~~l~~L~~L~~L~Ls 784 (876)
T 4ecn_A 766 SS-FPTQPLNSSQLKAFGIR 784 (876)
T ss_dssp SS-CCCGGGGCTTCCEEECC
T ss_pred Cc-cchhhhcCCCCCEEECC
Confidence 98 46566665555555443
No 274
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=2.5e-29 Score=273.60 Aligned_cols=270 Identities=22% Similarity=0.213 Sum_probs=229.7
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCC-chhhcCCccCcEEeeccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAI-PKAVASISTLADLTLEFNQF 79 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~i-p~~l~~l~~L~~L~L~~N~l 79 (809)
++++++++. .+|..+. ++|++|+|++|.+++..|..|..++ |+.|++++|.+..+ |..+..+++|++|+|++|++
T Consensus 38 l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 114 (332)
T 2ft3_A 38 VQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHL 114 (332)
T ss_dssp EECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCC
T ss_pred EECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcC
Confidence 577888887 7787775 7899999999999988888898886 99999999999888 77899999999999999999
Q ss_pred ccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeeccccc--CcCchhhhcccccceEecccCcCCCCCCc
Q 043333 80 SGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFT--GQIPDYIQNWTKLEKLFIEGSGLAGPIPS 157 (809)
Q Consensus 80 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 157 (809)
+ .+|..+. ++|++|+|++|++++..+..|.++++|+.|+|++|.++ +..|..+..+ +|+.|++++|++++ +|.
T Consensus 115 ~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~ 189 (332)
T 2ft3_A 115 V-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPK 189 (332)
T ss_dssp C-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCS
T ss_pred C-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCc
Confidence 9 6676555 79999999999999777778999999999999999996 4677888888 99999999999995 666
Q ss_pred cccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCcc
Q 043333 158 GIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLT 237 (809)
Q Consensus 158 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~ 237 (809)
.+. ++|+.|++++|.+..+++..+.++++|+.|+|++|++.+..+..|..+++|+.|+|++|+|+.+++.....++|+
T Consensus 190 ~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~ 267 (332)
T 2ft3_A 190 DLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQ 267 (332)
T ss_dssp SSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCC
T ss_pred ccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCC
Confidence 554 799999999999999998999999999999999999999999999999999999999999996555443449999
Q ss_pred EEEeeCccCCCCCChhhhh-------ccCccccccCCccc--cCCCCCccccc
Q 043333 238 YMYLTGNLLTGPVPDWIVR-------KRNKHIDLSYNNFI--DGSSDSNCENQ 281 (809)
Q Consensus 238 ~L~Ls~N~l~~~~p~~~~~-------~~l~~L~Ls~N~l~--~~~~~~~~~~~ 281 (809)
.|+|++|++++..+..+.. ..++.|++++|++. +..+..+....
T Consensus 268 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~ 320 (332)
T 2ft3_A 268 VVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVT 320 (332)
T ss_dssp EEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBC
T ss_pred EEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccc
Confidence 9999999999887776643 34678999999987 44444343333
No 275
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=9e-29 Score=268.85 Aligned_cols=251 Identities=22% Similarity=0.256 Sum_probs=218.5
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCch-hhcCCccCcEEeecccccccCCCccccCCCCCCEEEcc
Q 043333 21 PFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPK-AVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLN 99 (809)
Q Consensus 21 ~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 99 (809)
.+|+.++++++.++ .+|..+. -.++.|++++|.+..++. .+.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP-PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCCeEEEecCCCcc-ccCccCC-CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 47999999999998 5665544 247889999999999876 78999999999999999998889999999999999999
Q ss_pred CCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCC--CCCccccCCCCCCEEeccCCCCCC
Q 043333 100 SNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAG--PIPSGIASLVELTDLRISDLNGPE 177 (809)
Q Consensus 100 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~n~l~~ 177 (809)
+|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|+|++|.++. ..+..+..+++|+.|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 99999 5666554 799999999999998888889999999999999999964 678889999999999999999998
Q ss_pred CCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhh-
Q 043333 178 GPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIV- 255 (809)
Q Consensus 178 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~- 255 (809)
++...+ ++|+.|+|++|++.+..|..|..+++|+.|+|++|++++.++..+.. ++|+.|+|++|+++ .+|..+.
T Consensus 186 l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 IPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp CCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred CCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 875543 78999999999999999999999999999999999999988877766 89999999999999 4555444
Q ss_pred hccCccccccCCccccCCCCCcccc
Q 043333 256 RKRNKHIDLSYNNFIDGSSDSNCEN 280 (809)
Q Consensus 256 ~~~l~~L~Ls~N~l~~~~~~~~~~~ 280 (809)
...++.|++++|++++.++..+|..
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~ 286 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPP 286 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCS
T ss_pred CCCcCEEECCCCcCCccChhhcCCc
Confidence 4678999999999999888888754
No 276
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=1.6e-30 Score=291.56 Aligned_cols=200 Identities=16% Similarity=0.171 Sum_probs=153.6
Q ss_pred cCCCCCCeeccCCCccEEEeEe-eCCeEEEEEEecccCc---ccchhHHHHHHHHhhcCC-Cce---------------E
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSK---QGNREFVNEIGMISALQH-PNL---------------V 634 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~---~~~~~f~~Ei~~l~~l~H-~nI---------------v 634 (809)
..|...+.||+|+||.||+|.. .+|+.||||++..... ...+.|.+|+.+++.++| +|. +
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4566778999999999999995 4689999999874322 235778999999999987 221 1
Q ss_pred e------EEeEEEe-----CCeEEEEEEcccCCchhhhccCC---CccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 043333 635 K------LYGCCIE-----GNQLLLIYEYMENNSLARALFGP---EEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIV 700 (809)
Q Consensus 635 ~------l~~~~~~-----~~~~~lV~ey~~~gsL~~~L~~~---~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 700 (809)
. +..++.. ....+++|+++ +++|.+++... ......+++..+..++.|+++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1 1111111 12356777754 68999887311 12244578899999999999999999998 899
Q ss_pred EcCCCCCCEEEcCCCceEEEecCCccccCCCCcceeccccccccccchhhh----------ccCCCCchHHHHHHHHHHH
Q 043333 701 HRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYA----------MRGYLTDKADVYSFGIVAL 770 (809)
Q Consensus 701 H~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~ksDVwSlGvil~ 770 (809)
||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998764432 334567 999999999 5556888999999999999
Q ss_pred HHHcCCCCCCCCC
Q 043333 771 EIVSGRSNVICRT 783 (809)
Q Consensus 771 elltGk~P~~~~~ 783 (809)
||++|+.||....
T Consensus 309 elltg~~Pf~~~~ 321 (413)
T 3dzo_A 309 WIWCADLPNTDDA 321 (413)
T ss_dssp HHHHSSCCCCTTG
T ss_pred HHHHCCCCCCCcc
Confidence 9999999997643
No 277
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=6.6e-29 Score=270.21 Aligned_cols=260 Identities=22% Similarity=0.243 Sum_probs=220.1
Q ss_pred ccCCccCCCC------CCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCc-hhhcCCccCcEEeecccccccCC
Q 043333 11 GRLPPELTRL------PFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIP-KAVASISTLADLTLEFNQFSGDL 83 (809)
Q Consensus 11 ~~lp~~l~~l------~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l~~~~ 83 (809)
..+|+.+... .+|+.+++++|.++ .+|..+. -.++.|++++|.+..++ ..+.++++|++|+|++|++++..
T Consensus 17 ~~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 94 (332)
T 2ft3_A 17 DSLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS-PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIH 94 (332)
T ss_dssp --------CCCCSSCEEETTEEECCSSCCS-SCCSCCC-TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred ccCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC-CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccC
Confidence 3566655433 37999999999998 5666554 25889999999999885 48999999999999999999888
Q ss_pred CccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCC--CCCCccccC
Q 043333 84 PAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLA--GPIPSGIAS 161 (809)
Q Consensus 84 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~ 161 (809)
|..|+++++|++|+|++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|+.|+|++|.++ +..|..+..
T Consensus 95 ~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 171 (332)
T 2ft3_A 95 EKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG 171 (332)
T ss_dssp GGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS
T ss_pred HhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC
Confidence 999999999999999999999 5666655 79999999999999777778999999999999999996 367888888
Q ss_pred CCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEE
Q 043333 162 LVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMY 240 (809)
Q Consensus 162 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ 240 (809)
+ +|+.|++++|.++.++...+ ++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++.++..+.. ++|+.|+
T Consensus 172 l-~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 247 (332)
T 2ft3_A 172 L-KLNYLRISEAKLTGIPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELH 247 (332)
T ss_dssp C-CCSCCBCCSSBCSSCCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEE
T ss_pred C-ccCEEECcCCCCCccCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEE
Confidence 8 99999999999999876543 78999999999999999999999999999999999999999877776 9999999
Q ss_pred eeCccCCCCCChhhh-hccCccccccCCccccCCCCCcccc
Q 043333 241 LTGNLLTGPVPDWIV-RKRNKHIDLSYNNFIDGSSDSNCEN 280 (809)
Q Consensus 241 Ls~N~l~~~~p~~~~-~~~l~~L~Ls~N~l~~~~~~~~~~~ 280 (809)
|++|+++ .+|..+. ...++.|++++|++++.++..++..
T Consensus 248 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~ 287 (332)
T 2ft3_A 248 LDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPV 287 (332)
T ss_dssp CCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCS
T ss_pred CCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccc
Confidence 9999999 5555454 4678999999999999888877754
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3e-29 Score=269.60 Aligned_cols=276 Identities=18% Similarity=0.203 Sum_probs=237.9
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCC---chhhcCCccCcEEeeccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAI---PKAVASISTLADLTLEFN 77 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~i---p~~l~~l~~L~~L~L~~N 77 (809)
++++++++. .+|..+. ++|++|+|++|+++...+..|..++ |+.|++++|.+..+ |..+..+++|++|+|++|
T Consensus 12 l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n 88 (306)
T 2z66_A 12 IRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN 88 (306)
T ss_dssp EECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSC
T ss_pred EEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCC
Confidence 567777777 7777665 7899999999999966666678885 99999999999876 678888999999999999
Q ss_pred ccccCCCccccCCCCCCEEEccCCccCccCc-hhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCC-CC
Q 043333 78 QFSGDLPAELGNLINLEKLHLNSNNFTGKLP-ESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAG-PI 155 (809)
Q Consensus 78 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~ 155 (809)
.++ .+|..+..+++|++|+|++|++++..+ ..+.++++|++|+|++|.+.+..+..+.++++|++|+|++|++++ .+
T Consensus 89 ~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 167 (306)
T 2z66_A 89 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 167 (306)
T ss_dssp SEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEE
T ss_pred ccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccc
Confidence 999 577789999999999999999996655 589999999999999999998899999999999999999999987 57
Q ss_pred CccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC--
Q 043333 156 PSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-- 233 (809)
Q Consensus 156 p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-- 233 (809)
|..+..+++|+.|++++|.++.+.+..+.++++|+.|+|++|++++..+..+..+++|+.|+|++|++++.+|..+..
T Consensus 168 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 247 (306)
T 2z66_A 168 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP 247 (306)
T ss_dssp CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCC
T ss_pred hhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhh
Confidence 899999999999999999999998899999999999999999999999989999999999999999999999988776
Q ss_pred CCccEEEeeCccCCCCCCh-h-hhh-ccCccccccCCccccCCCCCccccc
Q 043333 234 SGLTYMYLTGNLLTGPVPD-W-IVR-KRNKHIDLSYNNFIDGSSDSNCENQ 281 (809)
Q Consensus 234 ~~L~~L~Ls~N~l~~~~p~-~-~~~-~~l~~L~Ls~N~l~~~~~~~~~~~~ 281 (809)
++|+.|+|++|++++..+. . ... ...+.+.+..+.+.|..|..+.+..
T Consensus 248 ~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~~ 298 (306)
T 2z66_A 248 SSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMP 298 (306)
T ss_dssp TTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTCB
T ss_pred ccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCce
Confidence 4899999999999875431 1 121 2345666777888887766655433
No 279
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.96 E-value=2.2e-29 Score=296.84 Aligned_cols=135 Identities=25% Similarity=0.297 Sum_probs=96.5
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCC-chhhcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAI-PKAVASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~i-p~~l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|++.+..+..|.++++|++|+|++|.+++..|..|..++ |+.|++++|.+..+ |..+.++++|++|+|++|.
T Consensus 36 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~ 115 (606)
T 3vq2_A 36 NIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 115 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSC
T ss_pred EEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCc
Confidence 367777777777776777777777777777777776677777765 77777777777666 6677777777777777777
Q ss_pred cccCCCccccCCCCCCEEEccCCccCc-cCchhhhcccccceeeeecccccCcCchhh
Q 043333 79 FSGDLPAELGNLINLEKLHLNSNNFTG-KLPESFANLTRLKHFRISDNHFTGQIPDYI 135 (809)
Q Consensus 79 l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 135 (809)
+++..+..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++++..|..|
T Consensus 116 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 173 (606)
T 3vq2_A 116 LASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL 173 (606)
T ss_dssp CCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTT
T ss_pred cccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhh
Confidence 775555667777777777777777765 457777777777777777777665555433
No 280
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=7.4e-29 Score=303.13 Aligned_cols=283 Identities=20% Similarity=0.213 Sum_probs=193.8
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCC-CcccCCCC-ccccccccccCCCC-chhhcCCccCcEEeeccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTI-PSEWASLP-LVNLPLWKQANGAI-PKAVASISTLADLTLEFN 77 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~-L~~L~l~~n~~~~i-p~~l~~l~~L~~L~L~~N 77 (809)
+|+|++|++.+..|..|.++++|++|||++|.+.+.+ |..|..++ |+.|++++|.+..+ |..|.++++|++|+|++|
T Consensus 28 ~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n 107 (844)
T 3j0a_A 28 RLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFC 107 (844)
T ss_dssp EEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTC
T ss_pred EEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCC
Confidence 4789999999888899999999999999999665555 77788886 88999999888877 778899999999999999
Q ss_pred ccccCCCcc--ccCCCCCCEEEccCCccCccCc-hhhhcccccceeeeecccccCcCchhhhcc--cccceEecccCcCC
Q 043333 78 QFSGDLPAE--LGNLINLEKLHLNSNNFTGKLP-ESFANLTRLKHFRISDNHFTGQIPDYIQNW--TKLEKLFIEGSGLA 152 (809)
Q Consensus 78 ~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~ 152 (809)
.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|+|++|.+.
T Consensus 108 ~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~ 187 (844)
T 3j0a_A 108 GLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLY 187 (844)
T ss_dssp CCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSC
T ss_pred CCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccc
Confidence 998766654 8889999999999999987654 578899999999999999988888888777 67777777777777
Q ss_pred CCCCccccCCCC------CCEEeccCCCCCCCCCccc------------------------------------cC--CcC
Q 043333 153 GPIPSGIASLVE------LTDLRISDLNGPEGPFPRL------------------------------------SN--LKN 188 (809)
Q Consensus 153 ~~~p~~~~~l~~------L~~L~l~~n~l~~~~~~~l------------------------------------~~--l~~ 188 (809)
+..|..+..+.+ |+.|++++|.+....+..+ .+ .++
T Consensus 188 ~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~ 267 (844)
T 3j0a_A 188 SRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSS 267 (844)
T ss_dssp CCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSC
T ss_pred cccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCC
Confidence 666655554443 6666666664432221111 11 134
Q ss_pred CceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccC
Q 043333 189 MNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSY 266 (809)
Q Consensus 189 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~ 266 (809)
|+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..+.. ++|+.|+|++|++++..|..+.. ..++.|++++
T Consensus 268 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 347 (844)
T 3j0a_A 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347 (844)
T ss_dssp CCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCS
T ss_pred ccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCC
Confidence 555555555555555555555555555555555555555555444 55555555555555554444433 3445555555
Q ss_pred CccccCCCCCccccccc
Q 043333 267 NNFIDGSSDSNCENQSV 283 (809)
Q Consensus 267 N~l~~~~~~~~~~~~~~ 283 (809)
|++...++..+.....+
T Consensus 348 N~i~~~~~~~~~~l~~L 364 (844)
T 3j0a_A 348 NHIAIIQDQTFKFLEKL 364 (844)
T ss_dssp CCCCCCCSSCSCSCCCC
T ss_pred CCCCccChhhhcCCCCC
Confidence 55555444444333333
No 281
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=3.8e-29 Score=267.90 Aligned_cols=174 Identities=21% Similarity=0.340 Sum_probs=149.2
Q ss_pred cCCCCC-CeeccCCCccEEEeEe-eCCeEEEEEEecccCcccchhHHHHHHHH-hhcCCCceEeEEeEEEe----CCeEE
Q 043333 575 NNFAPD-NKIGEGGFGPVYKGLL-ADGKVIAVKQLSSKSKQGNREFVNEIGMI-SALQHPNLVKLYGCCIE----GNQLL 647 (809)
Q Consensus 575 ~~f~~~-~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l-~~l~H~nIv~l~~~~~~----~~~~~ 647 (809)
++|... +.||+|+||.||+|.. .+++.||||++.. ...+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 7799999999999986 4689999999853 34577888888 55689999999999987 66789
Q ss_pred EEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCceEEEecCC
Q 043333 648 LIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFGL 724 (809)
Q Consensus 648 lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~DfGl 724 (809)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 92 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 999999999999999542 234689999999999999999999998 8999999999999998 78999999999
Q ss_pred ccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 043333 725 AKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVIC 781 (809)
Q Consensus 725 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~~ 781 (809)
+..... ..++.++|||||||++|||++|+.||..
T Consensus 167 a~~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf~~ 200 (299)
T 3m2w_A 167 AKETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYS 200 (299)
T ss_dssp CEECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 864321 2357789999999999999999999964
No 282
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=1.5e-28 Score=286.98 Aligned_cols=278 Identities=15% Similarity=0.100 Sum_probs=216.2
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCC-CccccccccccCCCCc--hhhcCCccCcEEeeccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASL-PLVNLPLWKQANGAIP--KAVASISTLADLTLEFN 77 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l-~L~~L~l~~n~~~~ip--~~l~~l~~L~~L~L~~N 77 (809)
+|+|++|++.+..|..|..+++|++|||++|+|+ .+|.. .+ .|+.|++++|.+..+| ..+.++++|++|+|++|
T Consensus 80 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n 156 (562)
T 3a79_B 80 VLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAA 156 (562)
T ss_dssp EEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECS
T ss_pred EEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCC
Confidence 4789999999999999999999999999999999 56665 44 4999999999998875 79999999999999999
Q ss_pred ccccCCCccccCCCCC--CEEEccCCcc--CccCchhhhccc--------------------------------------
Q 043333 78 QFSGDLPAELGNLINL--EKLHLNSNNF--TGKLPESFANLT-------------------------------------- 115 (809)
Q Consensus 78 ~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~-------------------------------------- 115 (809)
++++. .+..+++| ++|+|++|++ ++..|..+..+.
T Consensus 157 ~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~ 233 (562)
T 3a79_B 157 KFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDE 233 (562)
T ss_dssp BCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCST
T ss_pred ccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccccccc
Confidence 99853 34444454 8888888888 666665555433
Q ss_pred -------------------------------------------ccceeeeecccccCcCchhh-----------------
Q 043333 116 -------------------------------------------RLKHFRISDNHFTGQIPDYI----------------- 135 (809)
Q Consensus 116 -------------------------------------------~L~~L~Ls~N~l~~~~p~~~----------------- 135 (809)
+|++|++++|+++|.+|..+
T Consensus 234 ~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~ 313 (562)
T 3a79_B 234 NCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVK 313 (562)
T ss_dssp THHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEE
T ss_pred ccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcc
Confidence 67777777888877776554
Q ss_pred ------------------------------------hcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCC
Q 043333 136 ------------------------------------QNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGP 179 (809)
Q Consensus 136 ------------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 179 (809)
..+++|++|+|++|++++.+|..+..+++|+.|++++|+++.++
T Consensus 314 ~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 393 (562)
T 3a79_B 314 NQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF 393 (562)
T ss_dssp ECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT
T ss_pred cceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc
Confidence 56788899999999998888888888999999999999888766
Q ss_pred C--ccccCCcCCceeeeccccccCCCCh-hhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhh
Q 043333 180 F--PRLSNLKNMNYLILRSGNIIGEMPE-YLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVR 256 (809)
Q Consensus 180 ~--~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 256 (809)
. ..+.++++|++|+|++|++.+.+|. .+..+++|+.|+|++|++++..|..+. ++|+.|+|++|+++..++..+..
T Consensus 394 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-~~L~~L~L~~N~l~~ip~~~~~l 472 (562)
T 3a79_B 394 KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP-PKVKVLDLHNNRIMSIPKDVTHL 472 (562)
T ss_dssp HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-TTCSEEECCSSCCCCCCTTTTSS
T ss_pred cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc-CcCCEEECCCCcCcccChhhcCC
Confidence 3 4578888999999999998885554 577888888888888888776666544 67888888888888544445544
Q ss_pred ccCccccccCCccccCCCCCcccccccce
Q 043333 257 KRNKHIDLSYNNFIDGSSDSNCENQSVNL 285 (809)
Q Consensus 257 ~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~ 285 (809)
..++.|+|++|+++..++..+.....+..
T Consensus 473 ~~L~~L~L~~N~l~~l~~~~~~~l~~L~~ 501 (562)
T 3a79_B 473 QALQELNVASNQLKSVPDGVFDRLTSLQY 501 (562)
T ss_dssp CCCSEEECCSSCCCCCCTTSTTTCTTCCC
T ss_pred CCCCEEECCCCCCCCCCHHHHhcCCCCCE
Confidence 66788888888888655443444444433
No 283
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=285.27 Aligned_cols=280 Identities=17% Similarity=0.115 Sum_probs=213.3
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCC--CchhhcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGA--IPKAVASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~--ip~~l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|++.+..|..|..+++|++|||++|+|+ .+|.. ..-.|+.|++++|.+.. +|..++++++|++|+|++|.
T Consensus 49 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~ 126 (520)
T 2z7x_B 49 ILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH-PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTH 126 (520)
T ss_dssp EEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC-CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESS
T ss_pred EEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc-ccCCccEEeccCCccccccchhhhccCCcceEEEecCcc
Confidence 4789999999988999999999999999999999 56655 33349999999999986 57899999999999999999
Q ss_pred cccCCCccccCCCCC--CEEEccCCcc--CccCchhhhccc---------------------------------------
Q 043333 79 FSGDLPAELGNLINL--EKLHLNSNNF--TGKLPESFANLT--------------------------------------- 115 (809)
Q Consensus 79 l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~--------------------------------------- 115 (809)
+++ ..+..+++| ++|+|++|++ ++..|..+..+.
T Consensus 127 l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 203 (520)
T 2z7x_B 127 LEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLED 203 (520)
T ss_dssp CCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCST
T ss_pred cch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccc
Confidence 874 344555555 6666666666 444444443322
Q ss_pred --------------------------------------------ccceeeeecccccCcCchhh----------------
Q 043333 116 --------------------------------------------RLKHFRISDNHFTGQIPDYI---------------- 135 (809)
Q Consensus 116 --------------------------------------------~L~~L~Ls~N~l~~~~p~~~---------------- 135 (809)
+|++|++++|+++|.+|..+
T Consensus 204 ~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l 283 (520)
T 2z7x_B 204 NKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQV 283 (520)
T ss_dssp TTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEE
T ss_pred cccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccc
Confidence 45555666666555554433
Q ss_pred -------------------------------------hcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCC
Q 043333 136 -------------------------------------QNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEG 178 (809)
Q Consensus 136 -------------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~ 178 (809)
..+++|++|+|++|++++.+|..+..+++|+.|++++|+++.+
T Consensus 284 ~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 363 (520)
T 2z7x_B 284 VSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKEL 363 (520)
T ss_dssp EECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBH
T ss_pred cccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCcc
Confidence 5678899999999999988899999999999999999999875
Q ss_pred CC--ccccCCcCCceeeeccccccCCCCh-hhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhh
Q 043333 179 PF--PRLSNLKNMNYLILRSGNIIGEMPE-YLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIV 255 (809)
Q Consensus 179 ~~--~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 255 (809)
+. ..+.++++|++|+|++|++.+.+|. .+..+++|+.|+|++|++++..|..+. ++|+.|+|++|+++..++....
T Consensus 364 ~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-~~L~~L~Ls~N~l~~ip~~~~~ 442 (520)
T 2z7x_B 364 SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP-PRIKVLDLHSNKIKSIPKQVVK 442 (520)
T ss_dssp HHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC-TTCCEEECCSSCCCCCCGGGGG
T ss_pred ccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc-ccCCEEECCCCcccccchhhhc
Confidence 43 4588899999999999999986665 478888999999999999877776554 7889999999998844444445
Q ss_pred hccCccccccCCccccCCCCCccccccccee
Q 043333 256 RKRNKHIDLSYNNFIDGSSDSNCENQSVNLF 286 (809)
Q Consensus 256 ~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~ 286 (809)
...++.|+|++|+++..+...+.....+..+
T Consensus 443 l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 473 (520)
T 2z7x_B 443 LEALQELNVASNQLKSVPDGIFDRLTSLQKI 473 (520)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCccCHHHhccCCcccEE
Confidence 5677888999998886655435444444443
No 284
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=2e-28 Score=292.55 Aligned_cols=284 Identities=17% Similarity=0.191 Sum_probs=181.7
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCch-hhcCCccCcEEeeccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPK-AVASISTLADLTLEFNQF 79 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~l 79 (809)
|+|++|++.+..+..|.++++|++|+|++|.+++..|..|..++ |+.|++++|.+..+|. .|.++++|++|+|++|++
T Consensus 30 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l 109 (680)
T 1ziw_A 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSI 109 (680)
T ss_dssp EECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCC
T ss_pred EECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCcc
Confidence 56777777766666677777777777777777766666666664 7777777777777765 467777777777777777
Q ss_pred ccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhh--cccccceEecccCcCCCCCCc
Q 043333 80 SGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQ--NWTKLEKLFIEGSGLAGPIPS 157 (809)
Q Consensus 80 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~ 157 (809)
++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|.+++..+..+. .+++|+.|+|++|++++..|.
T Consensus 110 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 189 (680)
T 1ziw_A 110 QKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPG 189 (680)
T ss_dssp CCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTT
T ss_pred CccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChh
Confidence 755556677777777777777777766666677777777777777777766665554 346777777777777766666
Q ss_pred cccCC---------------------------CCCCEEeccCCCCCCCCCccccCCcC--CceeeeccccccCCCChhhh
Q 043333 158 GIASL---------------------------VELTDLRISDLNGPEGPFPRLSNLKN--MNYLILRSGNIIGEMPEYLG 208 (809)
Q Consensus 158 ~~~~l---------------------------~~L~~L~l~~n~l~~~~~~~l~~l~~--L~~L~Ls~N~l~~~~p~~~~ 208 (809)
.+..+ ++|+.|++++|.+....+..+.+++. |+.|+|++|++.+..|..|.
T Consensus 190 ~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~ 269 (680)
T 1ziw_A 190 CFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFA 269 (680)
T ss_dssp GGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTT
T ss_pred hhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCccccc
Confidence 55543 34455555555555555555555543 66666666666666666666
Q ss_pred ccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCC-----CCh----hhh-hccCccccccCCccccCCCCCc
Q 043333 209 QMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGP-----VPD----WIV-RKRNKHIDLSYNNFIDGSSDSN 277 (809)
Q Consensus 209 ~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~-----~p~----~~~-~~~l~~L~Ls~N~l~~~~~~~~ 277 (809)
.+++|+.|+|++|++++.+|..+.. ++|+.|+|++|...+. +|. .+. ...++.|++++|.+++..+..+
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 349 (680)
T 1ziw_A 270 WLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMF 349 (680)
T ss_dssp TCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTT
T ss_pred CcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHh
Confidence 6666666666666666666655555 6666666666544431 121 121 2455667777777766655555
Q ss_pred ccccccce
Q 043333 278 CENQSVNL 285 (809)
Q Consensus 278 ~~~~~~~~ 285 (809)
.....+..
T Consensus 350 ~~l~~L~~ 357 (680)
T 1ziw_A 350 TGLINLKY 357 (680)
T ss_dssp TTCTTCCE
T ss_pred ccccCCcE
Confidence 44444333
No 285
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.1e-28 Score=276.87 Aligned_cols=226 Identities=20% Similarity=0.188 Sum_probs=105.7
Q ss_pred CCEEEccCCCCCCCCCcccCCCCccccccccccCCCCc-hhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCC
Q 043333 23 LQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIP-KAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSN 101 (809)
Q Consensus 23 L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 101 (809)
.+.++.+++.++ .+|..+. -.++.|++++|.+..++ ..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS-TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC-TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCEEEeCCCCcC-cCCCCCC-CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 345555555555 3333322 12344444444444443 34444555555555555554444444455555555555555
Q ss_pred ccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccC-cCCCCCCccccCCCCCCEEeccCCCCCCCCC
Q 043333 102 NFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGS-GLAGPIPSGIASLVELTDLRISDLNGPEGPF 180 (809)
Q Consensus 102 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 180 (809)
+|+...+..|.++++|++|+|++|+|+...+..|.++++|+.|+|++| .+....+..|.++++|+.|++++|.++.++
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~- 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP- 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC-
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc-
Confidence 555433334444555555555555554444444444555555555542 222222234444555555555555444433
Q ss_pred ccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCCh
Q 043333 181 PRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPD 252 (809)
Q Consensus 181 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~ 252 (809)
.+..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|+++.+..|.. ++|+.|+|++|+|++.++.
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 273 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 273 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChh
Confidence 2444445555555555554444444555555555555555555444444443 4455555555544443333
No 286
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=2.4e-28 Score=271.83 Aligned_cols=261 Identities=17% Similarity=0.170 Sum_probs=222.6
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchh-hcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKA-VASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~-l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|++.+..+..|..+++|++|+|++|.+++..|..|..++ |+.|++++|.+..+|.. +..+++|++|+|++|.
T Consensus 73 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 152 (390)
T 3o6n_A 73 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 152 (390)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCc
Confidence 478999999988888999999999999999999988888898886 99999999999999986 5899999999999999
Q ss_pred cccCCCccccCCCCCCEEEccCCccCccCchhhhccccc-------------------ceeeeecccccCcCchhhhccc
Q 043333 79 FSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRL-------------------KHFRISDNHFTGQIPDYIQNWT 139 (809)
Q Consensus 79 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------------~~L~Ls~N~l~~~~p~~~~~l~ 139 (809)
+++..+..|..+++|++|+|++|++++.. +..+++| +.|++++|.+... |.. ..+
T Consensus 153 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~-~~~--~~~ 226 (390)
T 3o6n_A 153 LERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV-RGP--VNV 226 (390)
T ss_dssp CCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEE-ECC--CCS
T ss_pred cCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeec-ccc--ccc
Confidence 99888888999999999999999999653 3444444 4455555555422 222 246
Q ss_pred ccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEecc
Q 043333 140 KLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLS 219 (809)
Q Consensus 140 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 219 (809)
+|+.|+|++|++++. ..+..+++|+.|++++|.+..+.+..|.++++|+.|+|++|++++. |..+..+++|+.|+|+
T Consensus 227 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~ 303 (390)
T 3o6n_A 227 ELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLS 303 (390)
T ss_dssp SCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEE-ECSSSCCTTCCEEECC
T ss_pred cccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCccc-CcccCCCCCCCEEECC
Confidence 899999999999964 6789999999999999999999889999999999999999999874 5566889999999999
Q ss_pred CCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhhccCccccccCCccccC
Q 043333 220 FNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDG 272 (809)
Q Consensus 220 ~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~ 272 (809)
+|+++++++.....++|+.|+|++|+++..... ....++.|++++|+|.|.
T Consensus 304 ~n~l~~~~~~~~~l~~L~~L~L~~N~i~~~~~~--~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 304 HNHLLHVERNQPQFDRLENLYLDHNSIVTLKLS--THHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp SSCCCCCGGGHHHHTTCSEEECCSSCCCCCCCC--TTCCCSEEECCSSCEEHH
T ss_pred CCcceecCccccccCcCCEEECCCCccceeCch--hhccCCEEEcCCCCccch
Confidence 999997766544449999999999999976433 235789999999999874
No 287
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=6.9e-28 Score=272.66 Aligned_cols=243 Identities=18% Similarity=0.186 Sum_probs=219.5
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCc-hhhcCCccCcEEeeccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIP-KAVASISTLADLTLEFNQF 79 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l 79 (809)
++.+++++. .+|..+. ++++.|+|++|+|+...+..|..++ |+.|++++|.+..++ ..|.++++|++|+|++|++
T Consensus 48 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 345666666 7888776 7899999999999988889999986 999999999999886 5889999999999999999
Q ss_pred ccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeeccc-ccCcCchhhhcccccceEecccCcCCCCCCcc
Q 043333 80 SGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNH-FTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSG 158 (809)
Q Consensus 80 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 158 (809)
++..+..|..+++|++|+|++|+|+...+..|.++++|+.|+|++|. +....+..|.++++|+.|+|++|+++ .+| .
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~ 202 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-N 202 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-C
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-c
Confidence 97666789999999999999999998878899999999999999954 55444557999999999999999999 555 4
Q ss_pred ccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCcc
Q 043333 159 IASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLT 237 (809)
Q Consensus 159 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~ 237 (809)
+..+++|+.|++++|.++.+.+..|.++++|+.|+|++|++.+..+..|.++++|+.|+|++|+|+++++..+.. ++|+
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 282 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLE 282 (440)
T ss_dssp CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCC
T ss_pred cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCC
Confidence 889999999999999999999999999999999999999999999999999999999999999999999988876 9999
Q ss_pred EEEeeCccCCCC
Q 043333 238 YMYLTGNLLTGP 249 (809)
Q Consensus 238 ~L~Ls~N~l~~~ 249 (809)
.|+|++|++...
T Consensus 283 ~L~L~~Np~~Cd 294 (440)
T 3zyj_A 283 RIHLHHNPWNCN 294 (440)
T ss_dssp EEECCSSCEECS
T ss_pred EEEcCCCCccCC
Confidence 999999998753
No 288
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=5.8e-28 Score=274.28 Aligned_cols=246 Identities=18% Similarity=0.163 Sum_probs=204.2
Q ss_pred CCEEEccCCCCCCCCCcccCCCCccccccccccCCCC-chhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCC
Q 043333 23 LQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAI-PKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSN 101 (809)
Q Consensus 23 L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~i-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 101 (809)
...++.+++.++ .+|..+. -.++.|++++|.+..+ |..|.++++|+.|+|++|++++..+..|.++++|++|+|++|
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP-SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC-TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CcEEEECCCCcC-ccCCCCC-CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 567777777777 4555443 2367778888777776 457888899999999999999888888999999999999999
Q ss_pred ccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccC-cCCCCCCccccCCCCCCEEeccCCCCCCCCC
Q 043333 102 NFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGS-GLAGPIPSGIASLVELTDLRISDLNGPEGPF 180 (809)
Q Consensus 102 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 180 (809)
+|++..+..|.++++|++|+|++|+|+...+..|.++++|+.|+|++| .+....+..|..+++|+.|++++|.+..++
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~- 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP- 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC-
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc-
Confidence 999777777888999999999999998777778889999999999984 455444457888999999999999988764
Q ss_pred ccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-cc
Q 043333 181 PRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KR 258 (809)
Q Consensus 181 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~ 258 (809)
.+..+++|+.|+|++|++.+..|..|.++++|+.|+|++|++++..+..+.. ++|+.|+|++|+|++.++..+.. .+
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred -cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 5888899999999999999999999999999999999999999888888876 89999999999999877776654 56
Q ss_pred CccccccCCccccC
Q 043333 259 NKHIDLSYNNFIDG 272 (809)
Q Consensus 259 l~~L~Ls~N~l~~~ 272 (809)
++.|+|++|+|.|.
T Consensus 292 L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 292 LVELHLHHNPWNCD 305 (452)
T ss_dssp CCEEECCSSCEECS
T ss_pred CCEEEccCCCcCCC
Confidence 78999999999875
No 289
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.8e-28 Score=278.37 Aligned_cols=254 Identities=19% Similarity=0.207 Sum_probs=225.5
Q ss_pred ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecc
Q 043333 46 LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDN 125 (809)
Q Consensus 46 L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 125 (809)
...++..++.+..+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CcEEEECCCCcCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 4567788888999998765 68999999999999888999999999999999999999988899999999999999999
Q ss_pred cccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccC-CCCCCCCCccccCCcCCceeeeccccccCCCC
Q 043333 126 HFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISD-LNGPEGPFPRLSNLKNMNYLILRSGNIIGEMP 204 (809)
Q Consensus 126 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 204 (809)
+|++..+..|.++++|++|+|++|+++...+..|..+++|+.|++++ |.+..++...|.++++|++|+|++|++.+. |
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c
Confidence 99987778899999999999999999977778999999999999998 677778888899999999999999999876 3
Q ss_pred hhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccCCCCCcccccc
Q 043333 205 EYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDGSSDSNCENQS 282 (809)
Q Consensus 205 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~~~~~~~ 282 (809)
.+..+++|+.|+|++|+|++..|..+.. ++|+.|+|++|++++..|..+.. .+++.|+|++|+++..++..+..
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--- 288 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP--- 288 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT---
T ss_pred -cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc---
Confidence 4889999999999999999999998887 99999999999999998887765 67899999999999776554432
Q ss_pred cceeccccCCCCCCccccccccCCCCCCCcceeecCCCceee
Q 043333 283 VNLFASSSEGSNSTGIVSCLKSFTCPTNHSSLHINCGGKQVI 324 (809)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~ 324 (809)
+.+.......+|||.|||.+.++.
T Consensus 289 ------------------l~~L~~L~L~~Np~~CdC~~~~l~ 312 (452)
T 3zyi_A 289 ------------------LRYLVELHLHHNPWNCDCDILWLA 312 (452)
T ss_dssp ------------------CTTCCEEECCSSCEECSTTTHHHH
T ss_pred ------------------ccCCCEEEccCCCcCCCCCchHHH
Confidence 233445567899999999988753
No 290
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=2.5e-28 Score=284.20 Aligned_cols=287 Identities=18% Similarity=0.158 Sum_probs=210.6
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCC--chhhcCCccCcEEeeccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAI--PKAVASISTLADLTLEFN 77 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~i--p~~l~~l~~L~~L~L~~N 77 (809)
+|+|++|++.+..|..|..+++|++|+|++|++++..|..|..++ |+.|++++|.+..+ |..+.++++|++|+|++|
T Consensus 54 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n 133 (549)
T 2z81_A 54 VLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNV 133 (549)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEES
T ss_pred EEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCC
Confidence 478888888888888888888888888888888877777677775 88888888888743 567777888888888888
Q ss_pred ccccCCC-ccccCCCCCCEEEccCCccCccCchhhhc------------------------ccccceeeeecccccCc--
Q 043333 78 QFSGDLP-AELGNLINLEKLHLNSNNFTGKLPESFAN------------------------LTRLKHFRISDNHFTGQ-- 130 (809)
Q Consensus 78 ~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------------------------l~~L~~L~Ls~N~l~~~-- 130 (809)
.+.+.+| ..|.++++|++|+|++|++++..|..+++ +++|+.|+|++|++++.
T Consensus 134 ~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 213 (549)
T 2z81_A 134 ETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQF 213 (549)
T ss_dssp SSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCC
T ss_pred ccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccc
Confidence 7433443 46777777777777777777665555433 44555666666655541
Q ss_pred --------------------------------------------------------------------------------
Q 043333 131 -------------------------------------------------------------------------------- 130 (809)
Q Consensus 131 -------------------------------------------------------------------------------- 130 (809)
T Consensus 214 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i 293 (549)
T 2z81_A 214 SPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHI 293 (549)
T ss_dssp CCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBC
T ss_pred cccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhccccccccccccc
Confidence
Q ss_pred -------------------------------Cchhh-hcccccceEecccCcCCCCCC---ccccCCCCCCEEeccCCCC
Q 043333 131 -------------------------------IPDYI-QNWTKLEKLFIEGSGLAGPIP---SGIASLVELTDLRISDLNG 175 (809)
Q Consensus 131 -------------------------------~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~l~~n~l 175 (809)
+|..+ ..+++|+.|+|++|++++.+| ..+..+++|+.|++++|++
T Consensus 294 ~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l 373 (549)
T 2z81_A 294 PQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHL 373 (549)
T ss_dssp SCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCC
T ss_pred chhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcc
Confidence 23333 468899999999999987664 3467888999999999988
Q ss_pred CCCCC--ccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCC------------------CCCC
Q 043333 176 PEGPF--PRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNF------------------SGSG 235 (809)
Q Consensus 176 ~~~~~--~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~------------------~~~~ 235 (809)
+.++. ..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|+.++.... ..++
T Consensus 374 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~ 452 (549)
T 2z81_A 374 RSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPR 452 (549)
T ss_dssp CCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTT
T ss_pred cccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCCh
Confidence 87754 45788888999999888887 567777777778888777777765433211 2378
Q ss_pred ccEEEeeCccCCCCCChhhhhccCccccccCCccccCCCCCcccccccceeccc
Q 043333 236 LTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDGSSDSNCENQSVNLFASS 289 (809)
Q Consensus 236 L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~ 289 (809)
|+.|+|++|+|+ .+|.......++.|+|++|++++.++..+.....+..+..+
T Consensus 453 L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 505 (549)
T 2z81_A 453 LQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLH 505 (549)
T ss_dssp CCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECC
T ss_pred hcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEec
Confidence 999999999998 45555455778999999999998887767666555555443
No 291
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4e-28 Score=258.08 Aligned_cols=254 Identities=17% Similarity=0.172 Sum_probs=199.4
Q ss_pred CEEEccCCCCCCCCCcccCCCCccccccccccCCCCch-hhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCc
Q 043333 24 QEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPK-AVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNN 102 (809)
Q Consensus 24 ~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 102 (809)
++++++++.++ .+|..+. -.++.|++++|.+..+|. .+..+++|++|+|++|.+++..|..|..+++|++|+|++|+
T Consensus 14 ~~~~c~~~~l~-~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGIP-AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp CEEECCSSCCS-SCCTTCC-TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred eEEEcCcCCcc-cCCcCCC-CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 45666666665 3333221 135555666666655553 56778899999999999987778888889999999999997
Q ss_pred -cCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCc
Q 043333 103 -FTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFP 181 (809)
Q Consensus 103 -l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 181 (809)
++...|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|++++|.++.++..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 7766688888899999999999999887788888899999999999999877777788899999999999999888888
Q ss_pred cccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhhccCc
Q 043333 182 RLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVRKRNK 260 (809)
Q Consensus 182 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~~~l~ 260 (809)
.+.++++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++.++..+.. ++|+.|+|++|++++..+.......++
T Consensus 172 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~ 251 (285)
T 1ozn_A 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQ 251 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHH
T ss_pred HhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHH
Confidence 8888999999999999999888889999999999999999999887776665 889999999999887655432223445
Q ss_pred cccccCCccccCCCCCccc
Q 043333 261 HIDLSYNNFIDGSSDSNCE 279 (809)
Q Consensus 261 ~L~Ls~N~l~~~~~~~~~~ 279 (809)
.+..+.|.+.|..|..+.+
T Consensus 252 ~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 252 KFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp HCCSEECCCBEEESGGGTT
T ss_pred hcccccCccccCCchHhCC
Confidence 6667778887776655443
No 292
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=4.1e-28 Score=285.24 Aligned_cols=262 Identities=18% Similarity=0.176 Sum_probs=223.7
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchh-hcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKA-VASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~-l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|++.+..|..|..+++|++|+|++|.+++..|..|..++ |+.|++++|.+..+|.. +.++++|++|+|++|.
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~ 158 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 158 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCc
Confidence 478999999998889999999999999999999998888899886 99999999999999886 5899999999999999
Q ss_pred cccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccC------------------cCchhhhcccc
Q 043333 79 FSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTG------------------QIPDYIQNWTK 140 (809)
Q Consensus 79 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~------------------~~p~~~~~l~~ 140 (809)
+++..|..|+++++|++|+|++|++++.. +..+++|+.|++++|.+++ .++..+ .++
T Consensus 159 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~--~~~ 233 (597)
T 3oja_B 159 LERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPV--NVE 233 (597)
T ss_dssp CCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSC--CSC
T ss_pred CCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCccccccccc--CCC
Confidence 99888889999999999999999999653 3444555555555544442 122211 368
Q ss_pred cceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccC
Q 043333 141 LEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSF 220 (809)
Q Consensus 141 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (809)
|+.|+|++|.+++ +..+..+++|+.|++++|.+..+.+..|.++++|+.|+|++|.+++. |..+..+++|+.|+|++
T Consensus 234 L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~ 310 (597)
T 3oja_B 234 LTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSH 310 (597)
T ss_dssp CCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCS
T ss_pred CCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCC
Confidence 9999999999996 47899999999999999999999999999999999999999999884 66678899999999999
Q ss_pred CCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhhccCccccccCCccccC
Q 043333 221 NKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDG 272 (809)
Q Consensus 221 N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~ 272 (809)
|+++++++.....++|+.|+|++|.+++..+.. ...++.|+|++|+|.|.
T Consensus 311 N~l~~i~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 311 NHLLHVERNQPQFDRLENLYLDHNSIVTLKLST--HHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp SCCCCCGGGHHHHTTCSEEECCSSCCCCCCCCT--TCCCSEEECCSSCEEHH
T ss_pred CCCCccCcccccCCCCCEEECCCCCCCCcChhh--cCCCCEEEeeCCCCCCh
Confidence 999976655434499999999999999775443 35789999999999874
No 293
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.3e-27 Score=259.35 Aligned_cols=225 Identities=22% Similarity=0.276 Sum_probs=199.2
Q ss_pred CCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEc
Q 043333 20 LPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHL 98 (809)
Q Consensus 20 l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 98 (809)
.+++++|+|++|.++ .+|..+..++ |+.|++++|.+..+|..++.+++|++|+|++|.++ .+|..++++++|++|+|
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 477889999999988 6777777775 88899999888889988999999999999999999 78888999999999999
Q ss_pred cCCccCccCchhhhc---------ccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEe
Q 043333 99 NSNNFTGKLPESFAN---------LTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLR 169 (809)
Q Consensus 99 ~~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 169 (809)
++|++.+.+|..+.. +++|++|+|++|+++ .+|..+.++++|++|+|++|+++ .+|..+..+++|+.|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEE
Confidence 998888888887764 899999999999998 78888999999999999999999 4677789999999999
Q ss_pred ccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCC
Q 043333 170 ISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTG 248 (809)
Q Consensus 170 l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~ 248 (809)
+++|++....+..+.++++|+.|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..+.. ++|+.+++..|.+..
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 9999988888888999999999999999999999999999999999999999999999988877 899999999887763
No 294
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=2.4e-27 Score=257.38 Aligned_cols=224 Identities=23% Similarity=0.285 Sum_probs=196.3
Q ss_pred CccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeec
Q 043333 45 PLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISD 124 (809)
Q Consensus 45 ~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 124 (809)
.++.|++++|.+..+|..+..+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++
T Consensus 82 ~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~ 159 (328)
T 4fcg_A 82 GRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRA 159 (328)
T ss_dssp TCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEE
T ss_pred ceeEEEccCCCchhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCC
Confidence 478889999999999999988999999999999999 88888999999999999999999 7788899999999999999
Q ss_pred ccccCcCchhhhc---------ccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeec
Q 043333 125 NHFTGQIPDYIQN---------WTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILR 195 (809)
Q Consensus 125 N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 195 (809)
|++.+.+|..+.. +++|+.|+|++|+++ .+|..+..+++|+.|++++|.+..++. .+..+++|++|+|+
T Consensus 160 n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~-~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 160 CPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGP-AIHHLPKLEELDLR 237 (328)
T ss_dssp ETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCG-GGGGCTTCCEEECT
T ss_pred CCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCch-hhccCCCCCEEECc
Confidence 8888888887664 899999999999998 888889999999999999999987664 58889999999999
Q ss_pred cccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccC
Q 043333 196 SGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 196 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~ 272 (809)
+|++.+.+|..|..+++|+.|+|++|++.+.+|..+.. ++|+.|+|++|++.+.+|..+.. .+++.+++..|.+...
T Consensus 238 ~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 238 GCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp TCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred CCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHH
Confidence 99999999999999999999999999998888887766 89999999999999999988766 4568888887766543
No 295
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.6e-29 Score=269.85 Aligned_cols=248 Identities=20% Similarity=0.196 Sum_probs=212.4
Q ss_pred CCCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCC--Cchhhc-------CCccCcEEeecccccccCCCccc
Q 043333 17 LTRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGA--IPKAVA-------SISTLADLTLEFNQFSGDLPAEL 87 (809)
Q Consensus 17 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~--ip~~l~-------~l~~L~~L~L~~N~l~~~~p~~~ 87 (809)
+...++|++|++++|.+ .+|..+... ++.|++++|.+.. +|..+. ++++|++|+|++|++++.+|..+
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 45567899999999999 677766555 8899999998854 677666 79999999999999999999876
Q ss_pred --cCCCCCCEEEccCCccCccCchhhhcc-----cccceeeeecccccCcCchhhhcccccceEecccCcCCCC--CCcc
Q 043333 88 --GNLINLEKLHLNSNNFTGKLPESFANL-----TRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGP--IPSG 158 (809)
Q Consensus 88 --~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~ 158 (809)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. .|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 8999999999999999977 8888888 9999999999999988889999999999999999998765 2334
Q ss_pred c--cCCCCCCEEeccCCCCCCCC---CccccCCcCCceeeeccccccCCCC-hhhhccccccEEeccCCCCCCCCCCCCC
Q 043333 159 I--ASLVELTDLRISDLNGPEGP---FPRLSNLKNMNYLILRSGNIIGEMP-EYLGQMIGLRVLDLSFNKLSGVIPSNFS 232 (809)
Q Consensus 159 ~--~~l~~L~~L~l~~n~l~~~~---~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 232 (809)
+ ..+++|++|++++|.++.++ ...+.++++|++|+|++|++.+..| ..+..+++|+.|+|++|+|+.+ |..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~i-p~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQV-PKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSC-CSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChh-hhhcc
Confidence 4 88999999999999998543 3345788999999999999999886 5577789999999999999954 44444
Q ss_pred CCCccEEEeeCccCCCCCChhhhhccCccccccCCcccc
Q 043333 233 GSGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFID 271 (809)
Q Consensus 233 ~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~ 271 (809)
++|+.|+|++|+|++. |......+++.|+|++|++++
T Consensus 274 -~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred -CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 8999999999999987 554445678999999999976
No 296
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=6.7e-28 Score=259.04 Aligned_cols=247 Identities=17% Similarity=0.179 Sum_probs=220.8
Q ss_pred CCEEEccCCCCCCCCCcccCCCCccccccccccCCCCchh-hcCCccCcEEeecccccccC--CCccccCCCCCCEEEcc
Q 043333 23 LQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPKA-VASISTLADLTLEFNQFSGD--LPAELGNLINLEKLHLN 99 (809)
Q Consensus 23 L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~~-l~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~ 99 (809)
-+.++++++.++ .+|..+. -.++.|++++|.+..+|.. +.++++|++|+|++|.++.. .+..+..+++|++|+|+
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~-~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP-SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC-TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CCEEEcCCCCcc-cCCCCCC-CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 368999999998 5565544 2588999999999999875 68999999999999999833 36778889999999999
Q ss_pred CCccCccCchhhhcccccceeeeecccccCcCc-hhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCC-
Q 043333 100 SNNFTGKLPESFANLTRLKHFRISDNHFTGQIP-DYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPE- 177 (809)
Q Consensus 100 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~- 177 (809)
+|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+..
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 99999 567789999999999999999996655 579999999999999999998889999999999999999999986
Q ss_pred CCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh
Q 043333 178 GPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR 256 (809)
Q Consensus 178 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~ 256 (809)
..+..+..+++|++|+|++|++.+..|..|..+++|+.|+|++|++++.++..+.. ++|+.|+|++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 55677999999999999999999999999999999999999999999998877776 99999999999999999887765
Q ss_pred --ccCccccccCCccccC
Q 043333 257 --KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 257 --~~l~~L~Ls~N~l~~~ 272 (809)
..++.|+|++|+|+|.
T Consensus 246 ~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCTTCCEEECTTCCEECS
T ss_pred hhccCCEEEccCCCeecc
Confidence 3689999999999875
No 297
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=9.3e-28 Score=263.43 Aligned_cols=279 Identities=17% Similarity=0.119 Sum_probs=210.9
Q ss_pred CCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCch-hhcCCccCcEEeecccccccCCCccccCCCCCCEE
Q 043333 18 TRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPK-AVASISTLADLTLEFNQFSGDLPAELGNLINLEKL 96 (809)
Q Consensus 18 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 96 (809)
..++.....++++|.++ .+|..+.. .++.|++++|.+..+|. .+..+++|++|+|++|++++..|..|.++++|++|
T Consensus 28 ~~C~~~~~c~~~~~~l~-~iP~~~~~-~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLN-SIPSGLTE-AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CEECTTSEEECCSTTCS-SCCTTCCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCeEeeCCCCCcc-cccccccc-cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 34455666788888877 45554443 57778888888877766 67888899999999999887777888888999999
Q ss_pred EccCCccCccCchhhhcccccceeeeecccccCcCc-hhhhcccccceEecccC-cCCCCCCccccCCCCCCEEeccCCC
Q 043333 97 HLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIP-DYIQNWTKLEKLFIEGS-GLAGPIPSGIASLVELTDLRISDLN 174 (809)
Q Consensus 97 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~n~ 174 (809)
+|++|++++..+..|+++++|++|+|++|++++..+ ..+.++++|++|++++| .++...+..|..+++|+.|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999986666568888899999999998884443 36888899999999988 4666667788888999999999998
Q ss_pred CCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC----CCccEEEeeCccCCC--
Q 043333 175 GPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG----SGLTYMYLTGNLLTG-- 248 (809)
Q Consensus 175 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----~~L~~L~Ls~N~l~~-- 248 (809)
+....+..+.++++|++|+|++|++....+..+..+++|+.|+|++|++++..+..+.. ..++.++|++|.+++
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~ 265 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDES 265 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHH
T ss_pred cCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcc
Confidence 88888888888999999999998886555555667889999999999998877665432 678888888888876
Q ss_pred --CCChhhhh-ccCccccccCCccccCCCCCcccccccceeccccCCCCCCccccccccCCCCCCCcceeecCC
Q 043333 249 --PVPDWIVR-KRNKHIDLSYNNFIDGSSDSNCENQSVNLFASSSEGSNSTGIVSCLKSFTCPTNHSSLHINCG 319 (809)
Q Consensus 249 --~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~ 319 (809)
.+|..+.. .+++.|+|++|+++..+...+. .+++.......+|+|.|+|.
T Consensus 266 l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~---------------------~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 266 LFQVMKLLNQISGLLELEFSRNQLKSVPDGIFD---------------------RLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTT---------------------TCTTCCEEECCSSCBCCCHH
T ss_pred hhhhHHHHhcccCCCEEECCCCCCCccCHHHHh---------------------cCCCCCEEEeeCCCccCcCC
Confidence 34554443 5678889999988754333222 23334455677888888885
No 298
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=279.97 Aligned_cols=285 Identities=19% Similarity=0.199 Sum_probs=187.1
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCch-hhcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPK-AVASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|++.+..|..|.++++|++|+|++|.++...|..|..++ |+.|++++|.+..+|. .++++++|++|+|++|.
T Consensus 56 ~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 135 (570)
T 2z63_A 56 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135 (570)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCc
Confidence 367778888777777778888888888888888776667777764 7777777777777665 56677777777777777
Q ss_pred ccc-CCCccccCCCCCCEEEccCCccCccCchhhh---------------------------------------------
Q 043333 79 FSG-DLPAELGNLINLEKLHLNSNNFTGKLPESFA--------------------------------------------- 112 (809)
Q Consensus 79 l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--------------------------------------------- 112 (809)
+++ .+|..|+++++|++|+|++|++++..|..++
T Consensus 136 l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~ 215 (570)
T 2z63_A 136 IQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLN 215 (570)
T ss_dssp CCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTT
T ss_pred cceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEeccccccccc
Confidence 765 3566677777777777777666543332221
Q ss_pred ----------------------------------------------------------------cccccceeee------
Q 043333 113 ----------------------------------------------------------------NLTRLKHFRI------ 122 (809)
Q Consensus 113 ----------------------------------------------------------------~l~~L~~L~L------ 122 (809)
.+++|+.|++
T Consensus 216 ~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~ 295 (570)
T 2z63_A 216 VMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE 295 (570)
T ss_dssp HHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC
T ss_pred chhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch
Confidence 1222333333
Q ss_pred -----------------------------------------------------------ecccccCcC--chhhhccccc
Q 043333 123 -----------------------------------------------------------SDNHFTGQI--PDYIQNWTKL 141 (809)
Q Consensus 123 -----------------------------------------------------------s~N~l~~~~--p~~~~~l~~L 141 (809)
++|++++.. |..+.++++|
T Consensus 296 ~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L 375 (570)
T 2z63_A 296 RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSL 375 (570)
T ss_dssp SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCC
T ss_pred hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccccccCcc
Confidence 333333221 3445555666
Q ss_pred ceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCC-ccccCCcCCceeeeccccccCCCChhhhccccccEEeccC
Q 043333 142 EKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPF-PRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSF 220 (809)
Q Consensus 142 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (809)
+.|+|++|++++.. ..+..+++|+.|++++|.+....+ ..+.++++|++|+|++|.+.+..|..|.++++|+.|+|++
T Consensus 376 ~~L~l~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 454 (570)
T 2z63_A 376 KYLDLSFNGVITMS-SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 454 (570)
T ss_dssp CEEECCSCSEEEEE-EEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcccccc-ccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcC
Confidence 66666666665333 336777777888888777776654 4577777788888887777777777777777777777777
Q ss_pred CCCC-CCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccCCCCCccccccccee
Q 043333 221 NKLS-GVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDGSSDSNCENQSVNLF 286 (809)
Q Consensus 221 N~l~-~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~~~~~~~~~~~~~ 286 (809)
|+++ +.+|..+.. ++|+.|+|++|++++..|..+.. .+++.|++++|++++.++..+.....+..+
T Consensus 455 n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 523 (570)
T 2z63_A 455 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKI 523 (570)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEE
Confidence 7776 456666655 77777777777777776666554 456777777777777666555544444433
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=7.9e-28 Score=264.02 Aligned_cols=267 Identities=20% Similarity=0.158 Sum_probs=207.0
Q ss_pred cccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCc-hhhcCCccCcEEeecccccc
Q 043333 3 ILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIP-KAVASISTLADLTLEFNQFS 80 (809)
Q Consensus 3 ~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l~ 80 (809)
+++++++. .+|..+. ++|++|+|++|.+++..+..|..++ |+.|++++|.+..++ ..+.++++|++|+|++|+++
T Consensus 37 ~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 113 (353)
T 2z80_A 37 KGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS 113 (353)
T ss_dssp ECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred eCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC
Confidence 56677777 6777665 5899999999999877666788875 888999999888874 56888999999999999998
Q ss_pred cCCCccccCCCCCCEEEccCCccCccCc-hhhhcccccceeeeecc-cccCcCchhhhcccccceEecccCcCCCCCCcc
Q 043333 81 GDLPAELGNLINLEKLHLNSNNFTGKLP-ESFANLTRLKHFRISDN-HFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSG 158 (809)
Q Consensus 81 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 158 (809)
+..+..|.++++|++|+|++|++++..+ ..+.++++|++|++++| .+....+..|.++++|++|++++|++++..|..
T Consensus 114 ~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 193 (353)
T 2z80_A 114 NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKS 193 (353)
T ss_dssp SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHH
Confidence 5544558889999999999999985433 47888999999999998 477666778889999999999999998888888
Q ss_pred ccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhh---ccccccEEeccCCCCCCC----CCCCC
Q 043333 159 IASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLG---QMIGLRVLDLSFNKLSGV----IPSNF 231 (809)
Q Consensus 159 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~ 231 (809)
+..+++|+.|++++|.+..++...+..+++|+.|+|++|++.+..+..+. ....++.++|++|.+++. +|..+
T Consensus 194 l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l 273 (353)
T 2z80_A 194 LKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLL 273 (353)
T ss_dssp TTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHH
T ss_pred HhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHH
Confidence 99999999999999998777766677788999999999998887665443 356677777777777652 33333
Q ss_pred CC-CCccEEEeeCccCCCCCChhhh-hccCccccccCCccccC
Q 043333 232 SG-SGLTYMYLTGNLLTGPVPDWIV-RKRNKHIDLSYNNFIDG 272 (809)
Q Consensus 232 ~~-~~L~~L~Ls~N~l~~~~p~~~~-~~~l~~L~Ls~N~l~~~ 272 (809)
.. ++|+.|+|++|+++..++..+. ..+++.|+|++|+++|.
T Consensus 274 ~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 274 NQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp HTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 33 7788888888888854444433 35668888888888764
No 300
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=1.5e-26 Score=253.05 Aligned_cols=254 Identities=20% Similarity=0.263 Sum_probs=134.3
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFS 80 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~ 80 (809)
|++++|++. .+| .+..+++|++|++++|.++...+ +..++ |+.|++++|.+..+| .+..+++|++|+|++|.++
T Consensus 49 L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~~-~~~~l~~L~~L~l~~n~i~ 123 (347)
T 4fmz_A 49 LVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDIS-ALQNLTNLRELYLNEDNIS 123 (347)
T ss_dssp EECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCSEEECTTSCCC
T ss_pred EEEeCCccc-cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCch-HHcCCCcCCEEECcCCccc
Confidence 556666665 333 36667777777777777764333 55554 667777777666664 4666677777777777766
Q ss_pred cCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCcccc
Q 043333 81 GDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIA 160 (809)
Q Consensus 81 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 160 (809)
+ ++. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|++.+..+ +.
T Consensus 124 ~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~ 196 (347)
T 4fmz_A 124 D-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LA 196 (347)
T ss_dssp C-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GG
T ss_pred C-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--cc
Confidence 3 333 6666666666666664443333 35566666666666666553322 5556666666666666553222 44
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEE
Q 043333 161 SLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMY 240 (809)
Q Consensus 161 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ 240 (809)
.+++|+.|++++|.+..... +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++. +.....++|+.|+
T Consensus 197 ~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 197 SLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLN 271 (347)
T ss_dssp GCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEE
T ss_pred CCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEE
Confidence 45555555555554444432 4444455555555554444333 44444455555555544443 1111124444444
Q ss_pred eeCccCCCCCChhhhhccCccccccCCccccCC
Q 043333 241 LTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDGS 273 (809)
Q Consensus 241 Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~ 273 (809)
+++|++++. +......+++.|++++|++++..
T Consensus 272 l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 272 VGSNQISDI-SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp CCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGG
T ss_pred ccCCccCCC-hhhcCCCCCCEEECcCCcCCCcC
Confidence 444444432 22222234444444444444433
No 301
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=1.5e-26 Score=252.87 Aligned_cols=257 Identities=22% Similarity=0.284 Sum_probs=207.4
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeeccccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQF 79 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l 79 (809)
+|+|++|++.+ +|+ +..+++|++|+|++|.++. + +.+..++ |+.|++++|.+..+|. +..+++|+.|++++|..
T Consensus 70 ~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~l~~n~~ 144 (347)
T 4fmz_A 70 YLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELYLNEDNISDISP-LANLTKMYSLNLGANHN 144 (347)
T ss_dssp EEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEECTTSCCCCCGG-GTTCTTCCEEECTTCTT
T ss_pred EEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEECcCCcccCchh-hccCCceeEEECCCCCC
Confidence 47888888884 444 8889999999999998885 3 3567765 8889999999888877 88889999999999966
Q ss_pred ccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccc
Q 043333 80 SGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGI 159 (809)
Q Consensus 80 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 159 (809)
...+ ..+..+++|++|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++|++++..+ +
T Consensus 145 ~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~ 217 (347)
T 4fmz_A 145 LSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--V 217 (347)
T ss_dssp CCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G
T ss_pred cccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--h
Confidence 6444 448888999999999999885444 8888999999999999885433 8888999999999998885544 7
Q ss_pred cCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEE
Q 043333 160 ASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYM 239 (809)
Q Consensus 160 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L 239 (809)
..+++|+.|++++|.++..+. +..+++|++|+|++|.+.+. ..+..+++|+.|++++|++++. +.....++|+.|
T Consensus 218 ~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L 292 (347)
T 4fmz_A 218 ANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSL 292 (347)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEE
T ss_pred hcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEE
Confidence 888899999999998888765 88889999999999988875 5688889999999999999876 333334889999
Q ss_pred EeeCccCCCCCChhhhh-ccCccccccCCccccCCC
Q 043333 240 YLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDGSS 274 (809)
Q Consensus 240 ~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~~~ 274 (809)
+|++|++++..|..+.. ..++.|++++|++++.++
T Consensus 293 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 293 FLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp ECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred ECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 99999998888877665 567899999999887543
No 302
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=6.7e-27 Score=248.60 Aligned_cols=224 Identities=22% Similarity=0.240 Sum_probs=207.3
Q ss_pred cccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeeccc
Q 043333 47 VNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNH 126 (809)
Q Consensus 47 ~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 126 (809)
..++.+++.+..+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 14 ~~~~c~~~~l~~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp CEEECCSSCCSSCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred eEEEcCcCCcccCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 46778888999999765 4799999999999998777889999999999999999998889999999999999999998
Q ss_pred -ccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCCh
Q 043333 127 -FTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPE 205 (809)
Q Consensus 127 -l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 205 (809)
+....|..|..+++|++|+|++|++++..|..|..+++|+.|++++|.+..++...|.++++|+.|+|++|++++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 8877788999999999999999999988899999999999999999999999998999999999999999999998888
Q ss_pred hhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccC
Q 043333 206 YLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 206 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~ 272 (809)
.|..+++|+.|+|++|++++..|..+.. ++|+.|+|++|++++.++..+.. ..++.|+|++|+|.|.
T Consensus 172 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred HhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 9999999999999999999998988877 99999999999999887776654 6779999999999874
No 303
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=5e-27 Score=277.46 Aligned_cols=113 Identities=21% Similarity=0.249 Sum_probs=100.3
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCch-hhcCCccCcEEeecccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPK-AVASISTLADLTLEFNQ 78 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~ 78 (809)
+|+|++|+|.+..|.+|.++++|++|+|++|+|++..+..|..++ |+.|++++|.+..+|. .|+++++|++|+|++|.
T Consensus 80 ~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~ 159 (635)
T 4g8a_A 80 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 159 (635)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCc
Confidence 489999999988888999999999999999999987778899886 9999999999999976 68999999999999999
Q ss_pred ccc-CCCccccCCCCCCEEEccCCccCccCchhhhc
Q 043333 79 FSG-DLPAELGNLINLEKLHLNSNNFTGKLPESFAN 113 (809)
Q Consensus 79 l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 113 (809)
+++ .+|..++.+++|++|+|++|+|++..|..|..
T Consensus 160 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 195 (635)
T 4g8a_A 160 IQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 195 (635)
T ss_dssp CCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH
T ss_pred cccCCCchhhccchhhhhhcccCccccccccccccc
Confidence 986 45788999999999999999998766655443
No 304
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=3.3e-26 Score=260.89 Aligned_cols=253 Identities=27% Similarity=0.344 Sum_probs=122.7
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFS 80 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~ 80 (809)
|+|++|++.+.. + +..+++|++|++++|.+.+..+ +..++ |+.|++++|.+..+|. +..+++|++|+|++|.++
T Consensus 73 L~Ls~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~ 147 (466)
T 1o6v_A 73 INFSNNQLTDIT-P-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNTIS 147 (466)
T ss_dssp EECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEEEEEEEEC
T ss_pred EECCCCccCCch-h-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH-HcCCCCCCEEECCCCccC
Confidence 455566555332 2 5566666666666666654333 44443 5666666666666554 556666666666666655
Q ss_pred cCCCc--------------------cccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccc
Q 043333 81 GDLPA--------------------ELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTK 140 (809)
Q Consensus 81 ~~~p~--------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 140 (809)
+ ++. .+.++++|++|+|++|++++. + .+..+++|++|++++|++++..| ++.+++
T Consensus 148 ~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 222 (466)
T 1o6v_A 148 D-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI-S-VLAKLTNLESLIATNNQISDITP--LGILTN 222 (466)
T ss_dssp C-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCCCGG--GGGCTT
T ss_pred C-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC-h-hhccCCCCCEEEecCCccccccc--ccccCC
Confidence 3 221 123334444444444444421 1 24444444444444444443322 344444
Q ss_pred cceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccC
Q 043333 141 LEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSF 220 (809)
Q Consensus 141 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (809)
|+.|+|++|++++. ..+..+++|+.|++++|.+...+. +..+++|+.|+|++|++.+..+ +..+++|+.|+|++
T Consensus 223 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 296 (466)
T 1o6v_A 223 LDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNE 296 (466)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCS
T ss_pred CCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCC
Confidence 44444444444421 234444555555555554444332 4455555555555555544433 44555555555555
Q ss_pred CCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhhccCccccccCCccccC
Q 043333 221 NKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDG 272 (809)
Q Consensus 221 N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~ 272 (809)
|++++.++ ....++|+.|+|++|++++..| ......++.|++++|++++.
T Consensus 297 n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 297 NQLEDISP-ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp SCCSCCGG-GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC
T ss_pred CcccCchh-hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc
Confidence 55554433 1122555555555555554443 12224445555555555543
No 305
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.7e-28 Score=285.05 Aligned_cols=185 Identities=18% Similarity=0.131 Sum_probs=128.8
Q ss_pred eccCCCccEEEeE-eeCCeEEEEEEecccC----------cccchhHHHHHHHHhhc-CCCceEeEEeEEEeCCeEEEEE
Q 043333 583 IGEGGFGPVYKGL-LADGKVIAVKQLSSKS----------KQGNREFVNEIGMISAL-QHPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 583 LG~G~fG~Vy~~~-~~~g~~vAVK~~~~~~----------~~~~~~f~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 650 (809)
.+.|++|.+..++ +--|+.+|||++.... ....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666655544 3358889999986541 12235699999999999 6999999999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCC
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 730 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 730 (809)
||++||+|.++|.. ..+++.. +|+.||+.||+|+|++ +||||||||+|||+++++++||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999943 3345543 5889999999999999 899999999999999999999999999987654
Q ss_pred CCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCC
Q 043333 731 DNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNV 779 (809)
Q Consensus 731 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~ 779 (809)
.... ....+||++|||||++.+ .+..++|+||+|+++++|.++..|+
T Consensus 392 ~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 3322 334679999999999875 4577899999999988776654443
No 306
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=6.7e-26 Score=258.29 Aligned_cols=256 Identities=22% Similarity=0.318 Sum_probs=211.9
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCch------------------
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPK------------------ 61 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~------------------ 61 (809)
+|+|++|++.+..| +..+++|++|+|++|.+++..+ +..++ |+.|++++|.+..+|.
T Consensus 94 ~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~ 169 (466)
T 1o6v_A 94 DILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTD 169 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCC
T ss_pred EEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccC
Confidence 46788888885544 8888999999999998886543 66665 8888888877766653
Q ss_pred --hhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhccc
Q 043333 62 --AVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWT 139 (809)
Q Consensus 62 --~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 139 (809)
.+.++++|+.|++++|.+++ + ..+..+++|++|++++|++++..| ++.+++|+.|+|++|++++ + ..+..++
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~ 243 (466)
T 1o6v_A 170 LKPLANLTTLERLDISSNKVSD-I-SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLT 243 (466)
T ss_dssp CGGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCT
T ss_pred chhhccCCCCCEEECcCCcCCC-C-hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCC
Confidence 36677889999999999984 3 358899999999999999997655 7889999999999999985 3 3588999
Q ss_pred ccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEecc
Q 043333 140 KLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLS 219 (809)
Q Consensus 140 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 219 (809)
+|+.|+|++|++++..+ +..+++|+.|++++|.+..++. +..+++|+.|+|++|++.+..+ +..+++|+.|+|+
T Consensus 244 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~ 317 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECC
T ss_pred CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECc
Confidence 99999999999996655 8899999999999999988765 8899999999999999988765 8899999999999
Q ss_pred CCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhhccCccccccCCccccCCC
Q 043333 220 FNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDGSS 274 (809)
Q Consensus 220 ~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~~ 274 (809)
+|++++.+| ....++|+.|++++|++++. +......+++.|++++|++++..+
T Consensus 318 ~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 318 FNNISDISP-VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp SSCCSCCGG-GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred CCcCCCchh-hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCccch
Confidence 999998877 33449999999999999976 444444678999999999987654
No 307
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=7.9e-26 Score=256.47 Aligned_cols=247 Identities=17% Similarity=0.107 Sum_probs=166.4
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFS 80 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~ 80 (809)
|+|++|++.+. | .+..+++|++|+|++|++++. | +..++ |+.|++++|.+..+| ++.+++|++|+|++|+++
T Consensus 47 L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L~L~~N~l~ 119 (457)
T 3bz5_A 47 LDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNLD--VTPLTKLTYLNCDTNKLT 119 (457)
T ss_dssp EECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEEECCSSCCS
T ss_pred EEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCceee--cCCCCcCCEEECCCCcCC
Confidence 66777777753 4 577777777777777777753 3 55554 777777777777775 677777777777777777
Q ss_pred cCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCcccc
Q 043333 81 GDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIA 160 (809)
Q Consensus 81 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 160 (809)
+ +| ++.+++|++|+|++|++++. + ++++++|++|++++|+..+.+ .+..+++|+.|+|++|++++ +| +.
T Consensus 120 ~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~ 188 (457)
T 3bz5_A 120 K-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VS 188 (457)
T ss_dssp C-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CT
T ss_pred e-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cc
Confidence 4 33 67777777777777777753 3 667777777777777555455 36677777777777777775 34 66
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-C-----
Q 043333 161 SLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-S----- 234 (809)
Q Consensus 161 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~----- 234 (809)
.+++|+.|++++|.++.++ +..+++|+.|+|++|++++ +| +..+++|+.|++++|++++.++..+.. .
T Consensus 189 ~l~~L~~L~l~~N~l~~~~---l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~ 262 (457)
T 3bz5_A 189 QNKLLNRLNCDTNNITKLD---LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCI 262 (457)
T ss_dssp TCTTCCEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECT
T ss_pred cCCCCCEEECcCCcCCeec---cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEecc
Confidence 7777777777777777763 6677777777777777777 34 677777777777777777766544332 1
Q ss_pred --CccEEEeeCccCCCCCChhhhhccCccccccCCccccCC
Q 043333 235 --GLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDGS 273 (809)
Q Consensus 235 --~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~ 273 (809)
+|+.|++++|.+.+.+|. ....+++.|++++|++.+..
T Consensus 263 ~n~L~~L~l~~n~~~~~~~~-~~l~~L~~L~Ls~n~~l~~l 302 (457)
T 3bz5_A 263 QTDLLEIDLTHNTQLIYFQA-EGCRKIKELDVTHNTQLYLL 302 (457)
T ss_dssp TCCCSCCCCTTCTTCCEEEC-TTCTTCCCCCCTTCTTCCEE
T ss_pred CCCCCEEECCCCccCCcccc-cccccCCEEECCCCccccee
Confidence 344555555555555542 12256677777777655443
No 308
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=6.2e-26 Score=239.95 Aligned_cols=221 Identities=20% Similarity=0.157 Sum_probs=192.8
Q ss_pred ccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccC
Q 043333 50 PLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTG 129 (809)
Q Consensus 50 ~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 129 (809)
+..+..+..+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++
T Consensus 13 ~c~~~~l~~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (276)
T 2z62_A 13 QCMELNFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90 (276)
T ss_dssp ECTTSCCSSCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EecCCCccccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCc
Confidence 334445556666553 579999999999997777789999999999999999998777789999999999999999998
Q ss_pred cCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCC-CccccCCcCCceeeeccccccCCCChhhh
Q 043333 130 QIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGP-FPRLSNLKNMNYLILRSGNIIGEMPEYLG 208 (809)
Q Consensus 130 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 208 (809)
..+..|.++++|++|++++|++++..+..+..+++|+.|++++|.+..+. +..+.++++|+.|+|++|++++..+..|.
T Consensus 91 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 170 (276)
T 2z62_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred cChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhh
Confidence 88888999999999999999999777778999999999999999998876 56789999999999999999999888888
Q ss_pred cccccc----EEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccC
Q 043333 209 QMIGLR----VLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 209 ~l~~L~----~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~ 272 (809)
.+++|+ .|++++|++++.++..+...+|+.|+|++|++++.++..+.. .+++.|+|++|+|+|.
T Consensus 171 ~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 171 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp HHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred hhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 888888 899999999999888888889999999999999887776654 6779999999999875
No 309
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.2e-27 Score=258.67 Aligned_cols=258 Identities=19% Similarity=0.099 Sum_probs=215.9
Q ss_pred cccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeeccccccc
Q 043333 3 ILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSG 81 (809)
Q Consensus 3 ~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~ 81 (809)
+++.+++...++..+..+++|++|+|++|++++..|..|..++ |+.|++++|.+..+++ +..+++|++|+|++|++++
T Consensus 16 ~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~ 94 (317)
T 3o53_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQE 94 (317)
T ss_dssp SCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEEE
T ss_pred eccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCcccc
Confidence 4566777655555667788999999999999988888898886 9999999999987765 8999999999999999984
Q ss_pred CCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCcccc-
Q 043333 82 DLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIA- 160 (809)
Q Consensus 82 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~- 160 (809)
. + ..++|++|+|++|++++..+.. +++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..+.
T Consensus 95 l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 166 (317)
T 3o53_A 95 L-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA 166 (317)
T ss_dssp E-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGG
T ss_pred c-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhh
Confidence 3 2 3489999999999999765543 67899999999999988888899999999999999999987777764
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEE
Q 043333 161 SLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMY 240 (809)
Q Consensus 161 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ 240 (809)
.+++|+.|++++|.++.++ ....+++|++|+|++|++.+..+. +..+++|+.|+|++|+|+++++.....++|+.|+
T Consensus 167 ~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~ 243 (317)
T 3o53_A 167 SSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFD 243 (317)
T ss_dssp GTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEE
T ss_pred ccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCcccchhhHhhcCCCCCEEE
Confidence 7899999999999998874 344699999999999999976554 9999999999999999997654433349999999
Q ss_pred eeCccCC-CCCChhhhh-ccCccccccCC-ccccC
Q 043333 241 LTGNLLT-GPVPDWIVR-KRNKHIDLSYN-NFIDG 272 (809)
Q Consensus 241 Ls~N~l~-~~~p~~~~~-~~l~~L~Ls~N-~l~~~ 272 (809)
|++|+++ +.+|..+.. ..++.+++++| .+.+.
T Consensus 244 l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~ 278 (317)
T 3o53_A 244 LRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQ 278 (317)
T ss_dssp CTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSS
T ss_pred ccCCCccCcCHHHHHhccccceEEECCCchhccCC
Confidence 9999999 666666654 45688888854 45544
No 310
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=9.7e-27 Score=266.25 Aligned_cols=239 Identities=20% Similarity=0.110 Sum_probs=200.7
Q ss_pred ccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCC
Q 043333 15 PELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINL 93 (809)
Q Consensus 15 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 93 (809)
.....+++|++|+|++|.+++..|..|..++ |+.|++++|.+..+++ +..+++|++|+|++|.|++.. ..++|
T Consensus 28 ~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~-----~~~~L 101 (487)
T 3oja_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELL-----VGPSI 101 (487)
T ss_dssp TTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEE-----ECTTC
T ss_pred HhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCC-----CCCCc
Confidence 3344555899999999999988888898886 9999999999987665 899999999999999998533 23899
Q ss_pred CEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCcccc-CCCCCCEEeccC
Q 043333 94 EKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIA-SLVELTDLRISD 172 (809)
Q Consensus 94 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~ 172 (809)
++|+|++|+|++..+. .+++|+.|+|++|.+++..|..++++++|+.|+|++|.+++..|..+. .+++|+.|++++
T Consensus 102 ~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~ 178 (487)
T 3oja_A 102 ETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178 (487)
T ss_dssp CEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTT
T ss_pred CEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCC
Confidence 9999999999976654 457899999999999998898999999999999999999988888876 799999999999
Q ss_pred CCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCC-CCCC
Q 043333 173 LNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLT-GPVP 251 (809)
Q Consensus 173 n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~-~~~p 251 (809)
|.++.++ .+..+++|+.|+|++|.+++..|. |..+++|+.|+|++|+|+++++.....++|+.|+|++|++. +.+|
T Consensus 179 N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 179 NFIYDVK--GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp SCCCEEE--CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred Ccccccc--ccccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcchH
Confidence 9998773 455699999999999999986665 88999999999999999986555334499999999999998 5555
Q ss_pred hhhhh-ccCcccccc
Q 043333 252 DWIVR-KRNKHIDLS 265 (809)
Q Consensus 252 ~~~~~-~~l~~L~Ls 265 (809)
..+.. ..++.++++
T Consensus 256 ~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 256 DFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHHhCCCCcEEecc
Confidence 55543 344666665
No 311
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=4.1e-25 Score=233.58 Aligned_cols=215 Identities=20% Similarity=0.191 Sum_probs=175.1
Q ss_pred cCCccCCCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCC
Q 043333 12 RLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLI 91 (809)
Q Consensus 12 ~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 91 (809)
.+|..+. ++|++|+|++|++++..+. .+..+++|++|+|++|++++..+..|.+++
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~----------------------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 76 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSY----------------------SFFSFPELQVLDLSRCEIQTIEDGAYQSLS 76 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTT----------------------TTTTCTTCSEEECTTCCCCEECTTTTTTCT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHh----------------------HhccccCCcEEECCCCcCCccCHHHccCCc
Confidence 4555443 4566666666666643332 456678889999999988877777888889
Q ss_pred CCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCC-CCccccCCCCCCEEec
Q 043333 92 NLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGP-IPSGIASLVELTDLRI 170 (809)
Q Consensus 92 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l 170 (809)
+|++|+|++|++++..+..|.++++|++|++++|++.+..+..+..+++|++|+|++|++++. +|..+..+++|+.|++
T Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~L 156 (276)
T 2z62_A 77 HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDL 156 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEEC
T ss_pred CCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEEC
Confidence 999999999998887778888889999999999998877666788889999999999998864 5888888999999999
Q ss_pred cCCCCCCCCCccccCCcCCc----eeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCcc
Q 043333 171 SDLNGPEGPFPRLSNLKNMN----YLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNL 245 (809)
Q Consensus 171 ~~n~l~~~~~~~l~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~ 245 (809)
++|.++.++...+..+++|+ .|+|++|.+.+..+..+.. .+|+.|+|++|+|++.++..+.. ++|+.|+|++|+
T Consensus 157 s~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 157 SSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp CSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred CCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 99999888877777777776 8999999999877776655 48999999999999998888776 999999999999
Q ss_pred CCCCCC
Q 043333 246 LTGPVP 251 (809)
Q Consensus 246 l~~~~p 251 (809)
+++..|
T Consensus 236 ~~c~c~ 241 (276)
T 2z62_A 236 WDCSCP 241 (276)
T ss_dssp BCCCTT
T ss_pred ccccCC
Confidence 998765
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=5.5e-26 Score=244.92 Aligned_cols=240 Identities=22% Similarity=0.244 Sum_probs=193.7
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCC-CCCCcccC-------CC-CccccccccccCC-CCchhh--cCCcc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLN-GTIPSEWA-------SL-PLVNLPLWKQANG-AIPKAV--ASIST 68 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~-~~~p~~~~-------~l-~L~~L~l~~n~~~-~ip~~l--~~l~~ 68 (809)
+|+|++|++ .+|..+... |++|+|++|.+. ..+|..+. .+ .|++|++++|.+. .+|..+ ..+++
T Consensus 47 ~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~ 122 (312)
T 1wwl_A 47 YLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPD 122 (312)
T ss_dssp THHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCC
T ss_pred eEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCC
Confidence 356788888 778776644 888899988884 44555443 34 4888899888886 678776 88999
Q ss_pred CcEEeecccccccCCCccccCC-----CCCCEEEccCCccCccCchhhhcccccceeeeecccccCc--Cchhh--hccc
Q 043333 69 LADLTLEFNQFSGDLPAELGNL-----INLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQ--IPDYI--QNWT 139 (809)
Q Consensus 69 L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~~l~ 139 (809)
|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. .|..+ ..++
T Consensus 123 L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 201 (312)
T 1wwl_A 123 LNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFP 201 (312)
T ss_dssp CSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCT
T ss_pred ccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCC
Confidence 99999999999976 7777776 8999999999999988888999999999999999998765 33444 8899
Q ss_pred ccceEecccCcCCCC--CC-ccccCCCCCCEEeccCCCCCCCC-CccccCCcCCceeeeccccccCCCChhhhccccccE
Q 043333 140 KLEKLFIEGSGLAGP--IP-SGIASLVELTDLRISDLNGPEGP-FPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRV 215 (809)
Q Consensus 140 ~L~~L~L~~N~l~~~--~p-~~~~~l~~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 215 (809)
+|++|+|++|++++. ++ ..+..+++|+.|++++|.+.... ...+..+++|++|+|++|+++ .+|..+. ++|+.
T Consensus 202 ~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~ 278 (312)
T 1wwl_A 202 TLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSV 278 (312)
T ss_dssp TCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEE
T ss_pred CCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceE
Confidence 999999999999832 22 34467889999999999998866 466778899999999999998 6666665 89999
Q ss_pred EeccCCCCCCCCCCCCCCCCccEEEeeCccCCCC
Q 043333 216 LDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGP 249 (809)
Q Consensus 216 L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~ 249 (809)
|+|++|+|++. |.....++|+.|+|++|++++.
T Consensus 279 L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 279 LDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp EECCSSCCCSC-CCTTTSCEEEEEECTTCTTTCC
T ss_pred EECCCCCCCCC-hhHhhCCCCCEEeccCCCCCCC
Confidence 99999999988 5533349999999999999863
No 313
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.92 E-value=1.2e-24 Score=246.74 Aligned_cols=243 Identities=21% Similarity=0.143 Sum_probs=206.7
Q ss_pred CCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccccCCCc
Q 043333 7 QNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPA 85 (809)
Q Consensus 7 nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~ 85 (809)
++..+..+..+..+++|++|++++|.+++. | .+..++ |+.|++++|.+..+| ++.+++|++|+|++|++++. +
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC-C-
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCcee-e-
Confidence 445556667788999999999999999964 5 577775 999999999999997 89999999999999999964 4
Q ss_pred cccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCC
Q 043333 86 ELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVEL 165 (809)
Q Consensus 86 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 165 (809)
++++++|++|+|++|++++ +| ++++++|++|++++|++++. + ++++++|++|++++|+..+.+ .+..+++|
T Consensus 102 -~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L 172 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQL 172 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTC
T ss_pred -cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcC
Confidence 8999999999999999996 45 89999999999999999974 3 889999999999999766566 48899999
Q ss_pred CEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCcc
Q 043333 166 TDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNL 245 (809)
Q Consensus 166 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~ 245 (809)
+.|++++|+++.++ +..+++|+.|++++|++++. .+..+++|+.|+|++|+++++ | ....++|+.|++++|+
T Consensus 173 ~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p-~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 173 TTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D-VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp CEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSC
T ss_pred CEEECCCCccceec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C-ccccCCCCEEEeeCCc
Confidence 99999999999976 78899999999999999987 388999999999999999995 4 3344999999999999
Q ss_pred CCCCCChhhhhc--------cCccccccCCccccC
Q 043333 246 LTGPVPDWIVRK--------RNKHIDLSYNNFIDG 272 (809)
Q Consensus 246 l~~~~p~~~~~~--------~l~~L~Ls~N~l~~~ 272 (809)
+++.++..+... +++.|++++|++.+.
T Consensus 245 l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~ 279 (457)
T 3bz5_A 245 LTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIY 279 (457)
T ss_dssp CSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCE
T ss_pred CCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCc
Confidence 999776554321 345556666655443
No 314
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.6e-24 Score=230.86 Aligned_cols=204 Identities=20% Similarity=0.196 Sum_probs=149.2
Q ss_pred hcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccc
Q 043333 63 VASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLE 142 (809)
Q Consensus 63 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 142 (809)
+.++++++.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 456677777777777777 5555443 5677777777777766677777777777777777777743332 6677777
Q ss_pred eEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCC
Q 043333 143 KLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNK 222 (809)
Q Consensus 143 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 222 (809)
.|+|++|+++ .+|..+..+++|+.|++++|+++.+++..|.++++|++|+|++|++.+..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 7777777777 666677777777777777777777777777777778888888777777777777777788888888888
Q ss_pred CCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhhccCccccccCCccccC
Q 043333 223 LSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDG 272 (809)
Q Consensus 223 l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~ 272 (809)
|+++++..+.. ++|+.|+|++|+|+..++..+....++.|+|++|+|.|.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 87777776664 778888888888775555555556677788888887763
No 315
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.5e-24 Score=226.90 Aligned_cols=184 Identities=21% Similarity=0.222 Sum_probs=142.2
Q ss_pred ccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEec
Q 043333 67 STLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFI 146 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 146 (809)
++|+.|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 46778888888887665567778888888888888887655556677888888888888887666666777888888888
Q ss_pred ccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCC
Q 043333 147 EGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGV 226 (809)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 226 (809)
++|++++..+..|..+++|+.|++++|.+..++...|..+++|+.|+|++|++.+..+..|..+++|+.|+|++|+|+++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 88888876677777788888888888888777777777888888888888888877777788888888888888888877
Q ss_pred CCCCCCC-CCccEEEeeCccCCCCC
Q 043333 227 IPSNFSG-SGLTYMYLTGNLLTGPV 250 (809)
Q Consensus 227 ~p~~~~~-~~L~~L~Ls~N~l~~~~ 250 (809)
++..+.. ++|+.|+|++|++...-
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred CHHHhccccCCCEEEecCCCeeCCC
Confidence 7776665 77888888888776544
No 316
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.92 E-value=3e-25 Score=251.46 Aligned_cols=244 Identities=20% Similarity=0.229 Sum_probs=164.8
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC--------------ccccccccccCCCCchhhcCC
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP--------------LVNLPLWKQANGAIPKAVASI 66 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~--------------L~~L~l~~n~~~~ip~~l~~l 66 (809)
+|++++|++ +.+|++++++++|++|++++|.+.+.+|..++.+. ++.|++++|.+..+|.. .
T Consensus 15 ~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~---~ 90 (454)
T 1jl5_A 15 EPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL---P 90 (454)
T ss_dssp --------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC---C
T ss_pred hhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC---c
Confidence 478899999 79999999999999999999999999999988875 37888999988888863 3
Q ss_pred ccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEec
Q 043333 67 STLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFI 146 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 146 (809)
++|++|+|++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|+|++|++++ +| .|+++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 688999999999985 6643 3678888888888874 3321 1578888888888885 66 4888888888888
Q ss_pred ccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCC
Q 043333 147 EGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGV 226 (809)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 226 (809)
++|++++ +|..+ .+|+.|++++|.+..++ .+.++++|+.|++++|++.+. |.. .++|+.|++++|+++.
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~n~l~~- 229 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKKL-PDL---PLSLESIVAGNNILEE- 229 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCSS-
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCcC-CCC---cCcccEEECcCCcCCc-
Confidence 8888874 55433 47888888888887754 577888888888888887763 322 2477778888887774
Q ss_pred CCCCCCCCCccEEEeeCccCCCCCChhhhhccCccccccCCccccC
Q 043333 227 IPSNFSGSGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDG 272 (809)
Q Consensus 227 ~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~ 272 (809)
+|.....++|+.|++++|++++. |... ..++.|++++|++++.
T Consensus 230 lp~~~~l~~L~~L~l~~N~l~~l-~~~~--~~L~~L~l~~N~l~~l 272 (454)
T 1jl5_A 230 LPELQNLPFLTTIYADNNLLKTL-PDLP--PSLEALNVRDNYLTDL 272 (454)
T ss_dssp CCCCTTCTTCCEEECCSSCCSSC-CSCC--TTCCEEECCSSCCSCC
T ss_pred ccccCCCCCCCEEECCCCcCCcc-cccc--cccCEEECCCCccccc
Confidence 34433337778888888877753 3322 4667777777777763
No 317
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.2e-25 Score=259.75 Aligned_cols=185 Identities=16% Similarity=0.231 Sum_probs=146.4
Q ss_pred CCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcc--------cchhHHHHHHHHhhcCCCceEeEEeEEEeCCeEEEE
Q 043333 578 APDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQ--------GNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 578 ~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~--------~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~lV 649 (809)
...+.||+|+||.||+|.. .++.+|+|+...+... ..+.|.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4567899999999999954 4677888886543211 124578999999999999999777777788888999
Q ss_pred EEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccC
Q 043333 650 YEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 729 (809)
Q Consensus 650 ~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 729 (809)
|||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+|||+++ ++||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999943 457999999999999998 8999999999999999 99999999998765
Q ss_pred CCCcce------eccccccccccchhhhcc--CCCCchHHHHHHHHHHHHHHcCCCCCC
Q 043333 730 EDNTHI------STRIAGTFGYMAPEYAMR--GYLTDKADVYSFGIVALEIVSGRSNVI 780 (809)
Q Consensus 730 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~ksDVwSlGvil~elltGk~P~~ 780 (809)
...... .....||+.|||||++.. ..|+..+|+||..+-.++.+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 432211 234679999999999976 567788899999999999988887763
No 318
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.92 E-value=3.7e-24 Score=242.54 Aligned_cols=231 Identities=23% Similarity=0.322 Sum_probs=117.5
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEcc
Q 043333 21 PFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLN 99 (809)
Q Consensus 21 ~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 99 (809)
++|++|++++|++++ +| .+..++ |+.|++++|.+..+|..+ .+|++|+|++|++++ +| .++++++|++|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 355555555555553 44 344443 555555555555555332 355555555555553 33 35555555555555
Q ss_pred CCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCC
Q 043333 100 SNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGP 179 (809)
Q Consensus 100 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 179 (809)
+|++++ +|... ++|++|++++|+++ .+|. ++.+++|+.|++++|++++ +|.. +++|+.|++++|.+..++
T Consensus 204 ~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~ 273 (454)
T 1jl5_A 204 NNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLP 273 (454)
T ss_dssp SSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCC
T ss_pred CCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccC
Confidence 555553 22211 34555555555555 3442 4555555555555555542 2321 244444444444444432
Q ss_pred CccccCCcCCceeeeccccccC--CCChhh-------------hcc-ccccEEeccCCCCCCCCCCCCCCCCccEEEeeC
Q 043333 180 FPRLSNLKNMNYLILRSGNIIG--EMPEYL-------------GQM-IGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTG 243 (809)
Q Consensus 180 ~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~-------------~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~ 243 (809)
.. +++|+.|++++|++++ .+|..+ ..+ ++|+.|++++|++++++ .. .++|+.|++++
T Consensus 274 ~~----~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~lp-~~--~~~L~~L~L~~ 346 (454)
T 1jl5_A 274 EL----PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELP-AL--PPRLERLIASF 346 (454)
T ss_dssp CC----CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCCC-CC--CTTCCEEECCS
T ss_pred cc----cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccccc-cc--CCcCCEEECCC
Confidence 11 1333333333333333 111111 122 47777888888877643 32 36788888888
Q ss_pred ccCCCCCChhhhhccCccccccCCcccc--CCCCCcc
Q 043333 244 NLLTGPVPDWIVRKRNKHIDLSYNNFID--GSSDSNC 278 (809)
Q Consensus 244 N~l~~~~p~~~~~~~l~~L~Ls~N~l~~--~~~~~~~ 278 (809)
|++++ +|. ....++.|++++|++++ ..|..+.
T Consensus 347 N~l~~-lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~ 380 (454)
T 1jl5_A 347 NHLAE-VPE--LPQNLKQLHVEYNPLREFPDIPESVE 380 (454)
T ss_dssp SCCSC-CCC--CCTTCCEEECCSSCCSSCCCCCTTCC
T ss_pred Ccccc-ccc--hhhhccEEECCCCCCCcCCCChHHHH
Confidence 88875 343 23566778888888877 3444443
No 319
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=3.7e-24 Score=227.99 Aligned_cols=205 Identities=20% Similarity=0.177 Sum_probs=178.3
Q ss_pred CCCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEE
Q 043333 17 LTRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKL 96 (809)
Q Consensus 17 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 96 (809)
+.++++|++|++++|.++ .+|. .+. ++++.|+|++|.+++..+..|.++++|++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~----------------------~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L 60 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPP----------------------DLP--KDTTILHLSENLLYTFSLATLMPYTRLTQL 60 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCS----------------------CCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEE
T ss_pred ccccCCccEEECCCCCCC-cCCC----------------------CCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEE
Confidence 567788888888888887 3332 222 578899999999998778889999999999
Q ss_pred EccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCC
Q 043333 97 HLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGP 176 (809)
Q Consensus 97 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 176 (809)
+|++|+|++..+ .+.+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..|..|..+++|+.|++++|+++
T Consensus 61 ~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 61 NLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp ECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC
Confidence 999999995433 278899999999999998 77888889999999999999999777788999999999999999999
Q ss_pred CCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCC
Q 043333 177 EGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGP 249 (809)
Q Consensus 177 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~ 249 (809)
.++...|..+++|+.|+|++|+++...+..|..+++|+.|+|++|+|+.+++..+...+|+.|+|++|++...
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 9998889999999999999999998888889999999999999999998877777779999999999999864
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=6.5e-24 Score=223.71 Aligned_cols=203 Identities=20% Similarity=0.262 Sum_probs=185.9
Q ss_pred ccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEec
Q 043333 67 STLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFI 146 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 146 (809)
.+++.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 46889999999999 6777654 68999999999999877779999999999999999999766677899999999999
Q ss_pred ccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCC
Q 043333 147 EGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGV 226 (809)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 226 (809)
++|++++..+..|..+++|+.|++++|.++.++...|.++++|++|+|++|++.+..+..|..+++|+.|+|++|+++++
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999987778899999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred CCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccC
Q 043333 227 IPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 227 ~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~ 272 (809)
++..+.. ++|+.|+|++|++++.++..+.. .+++.|+|++|+|.|.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 9988876 99999999999999887776654 6789999999999875
No 321
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.4e-24 Score=229.05 Aligned_cols=208 Identities=17% Similarity=0.206 Sum_probs=146.7
Q ss_pred hcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccc
Q 043333 63 VASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLE 142 (809)
Q Consensus 63 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 142 (809)
+..+++|+.|++++|.++ .++ .+..+++|++|+|++|++++ + ..+.++++|++|+|++|++++..+..|.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 345567777777777766 332 46667777777777777774 2 3666777777777777777766666667777777
Q ss_pred eEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCC
Q 043333 143 KLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNK 222 (809)
Q Consensus 143 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 222 (809)
+|+|++|++++..+..|..+++|+.|++++|.++.++...+..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 77777777776666667777777777777777777776667777777777777777777777777777777777777777
Q ss_pred CCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhhccCccccccCCccccCCCCCcccc
Q 043333 223 LSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDGSSDSNCEN 280 (809)
Q Consensus 223 l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~~~~~~~~ 280 (809)
+++.++..+.. ++|+.|+|++|++.+..| .++.++++.|.+++..|..++..
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~------~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCTT------TTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CCccCHHHHhCCcCCCEEEccCCCccccCc------HHHHHHHHHHhCCCcccCccccc
Confidence 77777766655 777777777777776554 35566777777777766655543
No 322
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3.2e-24 Score=226.40 Aligned_cols=223 Identities=17% Similarity=0.169 Sum_probs=162.4
Q ss_pred CCCEEEccCCCCCCCCCcccCCC-CccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccC
Q 043333 22 FLQEIDLTRNYLNGTIPSEWASL-PLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNS 100 (809)
Q Consensus 22 ~L~~L~Ls~n~l~~~~p~~~~~l-~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 100 (809)
++..+++..+.+..... ...+ .++.|++.++.+..++ .+..+++|++|+|++|.+++ + ..+..+++|++|+|++
T Consensus 20 ~l~~l~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHHTCSCTTSEEC--HHHHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTT
T ss_pred HHHHHHhcCcccccccc--cccccceeeeeeCCCCccccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCC
Confidence 34445555665553322 2223 2667777777777665 46777788888888888774 2 3677778888888888
Q ss_pred CccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCC
Q 043333 101 NNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPF 180 (809)
Q Consensus 101 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 180 (809)
|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|++++|+++.++.
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 88887666667778888888888888876666667778888888888888876666667778888888888888877777
Q ss_pred ccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhh
Q 043333 181 PRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIV 255 (809)
Q Consensus 181 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 255 (809)
..+.++++|+.|+|++|++.+..+..|..+++|+.|+|++|.+.+.. ++|+.|+++.|.++|.+|..+.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~------~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC------PGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT------TTTHHHHHHHHHTGGGBBCTTS
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC------cHHHHHHHHHHhCCCcccCccc
Confidence 77777888888888888888777777777888888888888776443 3577777888888887777654
No 323
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.3e-23 Score=218.82 Aligned_cols=210 Identities=20% Similarity=0.234 Sum_probs=166.3
Q ss_pred ccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEec
Q 043333 67 STLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFI 146 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 146 (809)
.+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 46778888888888 6676654 57888888888888887878888888999999999888877878888889999999
Q ss_pred ccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCC
Q 043333 147 EGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGV 226 (809)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 226 (809)
++|++++..+..|..+++|+.|++++|.++.++...|..+++|++|+|++|++.+..+..|..+++|+.|+|++|+|++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99998877777888889999999999999888888888999999999999999988888899999999999999999999
Q ss_pred CCCCCCC-CCccEEEeeCccCCCCCChh------hhhccCccccccCCccccCCCCCccc
Q 043333 227 IPSNFSG-SGLTYMYLTGNLLTGPVPDW------IVRKRNKHIDLSYNNFIDGSSDSNCE 279 (809)
Q Consensus 227 ~p~~~~~-~~L~~L~Ls~N~l~~~~p~~------~~~~~l~~L~Ls~N~l~~~~~~~~~~ 279 (809)
++..+.. ++|+.|+|++|++++..... +.....+..+.++|.+.+.+....|.
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~C~ 230 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVKDGTGQNLHESPDGVTCS 230 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTSTTHHHHHHHHHHSGGGBCC-------CCGGGCBBT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCccccHHHHHHHHhcccceeeccCcccccCCCcCccC
Confidence 8887776 89999999999999874432 22222344455666665554444443
No 324
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.91 E-value=1.6e-25 Score=241.76 Aligned_cols=237 Identities=20% Similarity=0.153 Sum_probs=195.1
Q ss_pred CCCEEEccCCCCCCCCCcccCCC-CccccccccccCCCCc-hhhcCCccCcEEeecccccccCCCccccCCCCCCEEEcc
Q 043333 22 FLQEIDLTRNYLNGTIPSEWASL-PLVNLPLWKQANGAIP-KAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLN 99 (809)
Q Consensus 22 ~L~~L~Ls~n~l~~~~p~~~~~l-~L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 99 (809)
+++.++++.+.+.......+..+ .+++|++++|.+..++ ..+..+++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45666777777765555555555 3899999999998886 588999999999999999986554 8999999999999
Q ss_pred CCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCC
Q 043333 100 SNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGP 179 (809)
Q Consensus 100 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 179 (809)
+|++++.. ..++|++|++++|++++..+.. +++|++|+|++|++++..+..+..+++|+.|++++|.+....
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 99999432 3489999999999999665543 678999999999999887888999999999999999999988
Q ss_pred Cccc-cCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhh-hc
Q 043333 180 FPRL-SNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIV-RK 257 (809)
Q Consensus 180 ~~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~~ 257 (809)
+..+ ..+++|++|+|++|.+++..+ ...+++|+.|+|++|+|+++++.....++|+.|+|++|++++. |..+. ..
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l-~~~~~~l~ 237 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLI-EKALRFSQ 237 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEE-CTTCCCCT
T ss_pred HHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccch-hhHhhcCC
Confidence 7776 478999999999999987733 3358999999999999998877744449999999999999964 44443 36
Q ss_pred cCccccccCCcccc
Q 043333 258 RNKHIDLSYNNFID 271 (809)
Q Consensus 258 ~l~~L~Ls~N~l~~ 271 (809)
+++.|++++|++.|
T Consensus 238 ~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 238 NLEHFDLRGNGFHC 251 (317)
T ss_dssp TCCEEECTTCCCBH
T ss_pred CCCEEEccCCCccC
Confidence 78999999999984
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=1.4e-25 Score=256.76 Aligned_cols=229 Identities=16% Similarity=0.097 Sum_probs=200.5
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeeccccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQF 79 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l 79 (809)
+|+|++|++.+..|..|..+++|++|+|++|.+++..| +..++ |+.|++++|.+..+|.. ++|+.|+|++|.+
T Consensus 38 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~L~~N~l 111 (487)
T 3oja_A 38 ELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLHAANNNI 111 (487)
T ss_dssp EEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEECCSSCC
T ss_pred EEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEECcCCcC
Confidence 48999999999888999999999999999999997665 77775 99999999999888743 8999999999999
Q ss_pred ccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhh-cccccceEecccCcCCCCCCcc
Q 043333 80 SGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQ-NWTKLEKLFIEGSGLAGPIPSG 158 (809)
Q Consensus 80 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~ 158 (809)
++..+. .+++|++|+|++|+|++..|..++++++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++..+
T Consensus 112 ~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~-- 186 (487)
T 3oja_A 112 SRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG-- 186 (487)
T ss_dssp CCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--
T ss_pred CCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--
Confidence 966554 468899999999999999899999999999999999999998888886 79999999999999996633
Q ss_pred ccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCC-CCCCCCCCC-CCc
Q 043333 159 IASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLS-GVIPSNFSG-SGL 236 (809)
Q Consensus 159 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~-~~L 236 (809)
+..+++|+.|++++|.++.+++. +..+++|+.|+|++|++.+ +|..+..+++|+.|+|++|.+. +.+|..+.. +.|
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L 264 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264 (487)
T ss_dssp CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHH
T ss_pred cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCC
Confidence 44699999999999999988765 8899999999999999997 6777999999999999999998 555555444 666
Q ss_pred cEEEee
Q 043333 237 TYMYLT 242 (809)
Q Consensus 237 ~~L~Ls 242 (809)
+.|+++
T Consensus 265 ~~l~~~ 270 (487)
T 3oja_A 265 QTVAKQ 270 (487)
T ss_dssp HHHHHH
T ss_pred cEEecc
Confidence 666664
No 326
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=3.3e-23 Score=242.27 Aligned_cols=239 Identities=23% Similarity=0.275 Sum_probs=151.1
Q ss_pred CccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCchhhcCCccCcEEeecccccc
Q 043333 1 HRILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFS 80 (809)
Q Consensus 1 ~L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~ 80 (809)
+|++++|++. .+|..+. ++|++|+|++|.|+ .+|..+ -.|+.|++++|.+..+|. .+++|++|+|++|+++
T Consensus 44 ~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~~l--~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~ 114 (622)
T 3g06_A 44 VLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPALP--PELRTLEVSGNQLTSLPV---LPPGLLELSIFSNPLT 114 (622)
T ss_dssp EEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCCCC--TTCCEEEECSCCCSCCCC---CCTTCCEEEECSCCCC
T ss_pred EEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCCcC--CCCCEEEcCCCcCCcCCC---CCCCCCEEECcCCcCC
Confidence 3788999988 7888776 78999999999998 455522 247889999999998887 6788999999999998
Q ss_pred cCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCcccc
Q 043333 81 GDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIA 160 (809)
Q Consensus 81 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 160 (809)
+ +|. .+++|++|+|++|+|++ +|.. +++|++|+|++|++++ +|.. +++|+.|+|++|+|++ +| .
T Consensus 115 ~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~---~ 178 (622)
T 3g06_A 115 H-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LP---M 178 (622)
T ss_dssp C-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CC---C
T ss_pred C-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCc---cCCCCEEECCCCCCCC-Cc---c
Confidence 4 554 56788888888888884 5543 4788888888888884 3432 3455555555555552 33 2
Q ss_pred CCCCCCEEeccCCCCCCCCCcc--c--------------cCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCC
Q 043333 161 SLVELTDLRISDLNGPEGPFPR--L--------------SNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLS 224 (809)
Q Consensus 161 ~l~~L~~L~l~~n~l~~~~~~~--l--------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 224 (809)
.+++|+.|++++|.++.++... + ..+++|+.|+|++|++++. | ..+++|+.|+|++|+|+
T Consensus 179 ~~~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~ 254 (622)
T 3g06_A 179 LPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLT 254 (622)
T ss_dssp CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCS
T ss_pred cCCCCcEEECCCCCCCCCCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCC
Confidence 3455555555555555433210 0 1124555566666555542 2 33455666666666665
Q ss_pred CCCCCCCCCCCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccC
Q 043333 225 GVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 225 ~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~ 272 (809)
.+++ ..++|+.|+|++|+|+ .+|..+.. .+++.|+|++|++++.
T Consensus 255 ~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~ 299 (622)
T 3g06_A 255 SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSER 299 (622)
T ss_dssp CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHH
T ss_pred cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCc
Confidence 4333 2355666666666666 33333332 4445666666665543
No 327
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.2e-23 Score=213.31 Aligned_cols=177 Identities=13% Similarity=0.162 Sum_probs=94.6
Q ss_pred hcCCccCcEEeecccc-cccCCCccccCCCCCCEEEccC-CccCccCchhhhcccccceeeeecccccCcCchhhhcccc
Q 043333 63 VASISTLADLTLEFNQ-FSGDLPAELGNLINLEKLHLNS-NNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTK 140 (809)
Q Consensus 63 l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 140 (809)
+..+++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+|++|++++ +|. |..+++
T Consensus 51 ~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~ 128 (239)
T 2xwt_C 51 FSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYS 128 (239)
T ss_dssp TTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCB
T ss_pred ccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccc
Confidence 3444555555555554 5544444555555555555555 55554444455555555555555555553 343 555555
Q ss_pred cc---eEecccC-cCCCCCCccccCCCCCC-EEeccCCCCCCCCCccccCCcCCceeeecccc-ccCCCChhhhcc-ccc
Q 043333 141 LE---KLFIEGS-GLAGPIPSGIASLVELT-DLRISDLNGPEGPFPRLSNLKNMNYLILRSGN-IIGEMPEYLGQM-IGL 213 (809)
Q Consensus 141 L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L 213 (809)
|+ .|++++| ++++..+..|..+++|+ .|++++|.++.++...+.. ++|+.|+|++|. +.+..+..|..+ ++|
T Consensus 129 L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L 207 (239)
T 2xwt_C 129 TDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGP 207 (239)
T ss_dssp CCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCC
T ss_pred cccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCC
Confidence 55 5555555 55544444455555555 5555555555555444444 555555555553 555555555555 555
Q ss_pred cEEeccCCCCCCCCCCCCCCCCccEEEeeCc
Q 043333 214 RVLDLSFNKLSGVIPSNFSGSGLTYMYLTGN 244 (809)
Q Consensus 214 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N 244 (809)
+.|+|++|+|+++++. ..++|+.|+++++
T Consensus 208 ~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 208 SLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp SEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred cEEECCCCccccCChh--HhccCceeeccCc
Confidence 5555555555544443 2245555555543
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.6e-23 Score=213.82 Aligned_cols=211 Identities=19% Similarity=0.194 Sum_probs=178.3
Q ss_pred cccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCc-cCccCchhhhcccccceeeeec-cc
Q 043333 49 LPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNN-FTGKLPESFANLTRLKHFRISD-NH 126 (809)
Q Consensus 49 L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~ 126 (809)
+.+..+.++.+|. +. ++|++|+|++|++++..+..|.++++|++|+|++|+ ++...+..|.++++|++|+|++ |+
T Consensus 16 ~~v~c~~l~~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~ 92 (239)
T 2xwt_C 16 FRVTCKDIQRIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRN 92 (239)
T ss_dssp TEEEECSCSSCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETT
T ss_pred ceeEccCccccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCC
Confidence 3333444777887 43 489999999999997777789999999999999997 8877777899999999999999 99
Q ss_pred ccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCC---EEeccCC-CCCCCCCccccCCcCCc-eeeeccccccC
Q 043333 127 FTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELT---DLRISDL-NGPEGPFPRLSNLKNMN-YLILRSGNIIG 201 (809)
Q Consensus 127 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~l~~n-~l~~~~~~~l~~l~~L~-~L~Ls~N~l~~ 201 (809)
+++..+..|.++++|++|+|++|++++ +|. |..+++|+ .|++++| .++.++...|.++++|+ .|+|++|+++.
T Consensus 93 l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~ 170 (239)
T 2xwt_C 93 LTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS 170 (239)
T ss_dssp CCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE
T ss_pred eeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc
Confidence 997777889999999999999999996 666 88888888 9999999 99999988899999999 99999999986
Q ss_pred CCChhhhccccccEEeccCCC-CCCCCCCCCCC--CCccEEEeeCccCCCCCChhhhhccCccccccCC
Q 043333 202 EMPEYLGQMIGLRVLDLSFNK-LSGVIPSNFSG--SGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYN 267 (809)
Q Consensus 202 ~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N 267 (809)
..+..|.. ++|+.|+|++|+ ++++++..|.. ++|+.|+|++|++++.++. ....++.|+++++
T Consensus 171 i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 171 VQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp ECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred cCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 55556666 899999999995 99888887764 6899999999999976655 3356778887765
No 329
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.7e-23 Score=225.17 Aligned_cols=227 Identities=18% Similarity=0.154 Sum_probs=182.2
Q ss_pred CCCCccccccccccCCC--Cch--hhcCCccCcEEeecccccccCCCccc--cCCCCCCEEEccCCccCccCc----hhh
Q 043333 42 ASLPLVNLPLWKQANGA--IPK--AVASISTLADLTLEFNQFSGDLPAEL--GNLINLEKLHLNSNNFTGKLP----ESF 111 (809)
Q Consensus 42 ~~l~L~~L~l~~n~~~~--ip~--~l~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~ 111 (809)
..+.++.+.+.++.+.. +.. ....+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+
T Consensus 62 ~~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~ 141 (310)
T 4glp_A 62 KALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQ 141 (310)
T ss_dssp SSCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHT
T ss_pred hhcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHh
Confidence 33345556665554422 111 12234679999999999999999888 899999999999999997655 445
Q ss_pred hcccccceeeeecccccCcCchhhhcccccceEecccCcCCCC--C--CccccCCCCCCEEeccCCCCCCCCCc---ccc
Q 043333 112 ANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGP--I--PSGIASLVELTDLRISDLNGPEGPFP---RLS 184 (809)
Q Consensus 112 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~l~~n~l~~~~~~---~l~ 184 (809)
..+++|++|+|++|++.+..|..|+.+++|++|+|++|++.+. + +..+..+++|++|++++|.++.++.. .+.
T Consensus 142 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~ 221 (310)
T 4glp_A 142 WLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAA 221 (310)
T ss_dssp TBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHH
T ss_pred hhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHh
Confidence 6799999999999999988889999999999999999998752 2 33457899999999999999765432 357
Q ss_pred CCcCCceeeeccccccCCCChhhhcc---ccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhhccCcc
Q 043333 185 NLKNMNYLILRSGNIIGEMPEYLGQM---IGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVRKRNKH 261 (809)
Q Consensus 185 ~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~ 261 (809)
++++|++|+|++|++.+..|..+..+ ++|++|+|++|+|+.+ |..+. ++|+.|+|++|+|++. |.......++.
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~l-p~~~~-~~L~~L~Ls~N~l~~~-~~~~~l~~L~~ 298 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQV-PKGLP-AKLRVLDLSSNRLNRA-PQPDELPEVDN 298 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSC-CSCCC-SCCSCEECCSCCCCSC-CCTTSCCCCSC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCch-hhhhc-CCCCEEECCCCcCCCC-chhhhCCCccE
Confidence 88999999999999999988887777 6999999999999965 44433 8999999999999975 33333467899
Q ss_pred ccccCCcccc
Q 043333 262 IDLSYNNFID 271 (809)
Q Consensus 262 L~Ls~N~l~~ 271 (809)
|+|++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999975
No 330
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=4.8e-23 Score=214.63 Aligned_cols=202 Identities=17% Similarity=0.193 Sum_probs=160.3
Q ss_pred cccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeeccccc
Q 043333 49 LPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFT 128 (809)
Q Consensus 49 L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 128 (809)
+++.++.+..+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|+
T Consensus 19 l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 96 (251)
T 3m19_A 19 VDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA 96 (251)
T ss_dssp EECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred EecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCccc
Confidence 3444444445554443 57899999999999888888999999999999999999888888999999999999999999
Q ss_pred CcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhh
Q 043333 129 GQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLG 208 (809)
Q Consensus 129 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 208 (809)
+..+..|..+++|++|+|++|+|++..+..|..+++|+.|++++|.++.++...|..+++|+.|+|++|++.+..+..|.
T Consensus 97 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 176 (251)
T 3m19_A 97 SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176 (251)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHh
Confidence 87778889999999999999999977777788999999999999999999888899999999999999999999888999
Q ss_pred ccccccEEeccCCCCCCCCCCCCC------CCCccEEEeeCccCCCCCCh
Q 043333 209 QMIGLRVLDLSFNKLSGVIPSNFS------GSGLTYMYLTGNLLTGPVPD 252 (809)
Q Consensus 209 ~l~~L~~L~Ls~N~l~~~~p~~~~------~~~L~~L~Ls~N~l~~~~p~ 252 (809)
.+++|+.|+|++|+++....+... ....+..+..+|.+.+.++.
T Consensus 177 ~l~~L~~L~l~~N~~~c~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (251)
T 3m19_A 177 RLGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVKDGTGQNLHESPDG 226 (251)
T ss_dssp TCTTCCEEECCSCCBCTTSTTHHHHHHHHHHSGGGBCC-------CCGGG
T ss_pred CCCCCCEEEeeCCceeCCccccHHHHHHHHhcccceeeccCcccccCCCc
Confidence 999999999999999876443321 12333445566666654444
No 331
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.89 E-value=6.6e-26 Score=257.71 Aligned_cols=270 Identities=21% Similarity=0.203 Sum_probs=172.9
Q ss_pred ccccCCCCCc----cCCccCCCCCCCCEEEccCCCCCCCCCcccCC------CCccccccccccCCC-----CchhhcCC
Q 043333 2 RILKSQNLPG----RLPPELTRLPFLQEIDLTRNYLNGTIPSEWAS------LPLVNLPLWKQANGA-----IPKAVASI 66 (809)
Q Consensus 2 L~L~~nnl~~----~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~------l~L~~L~l~~n~~~~-----ip~~l~~l 66 (809)
|+|++|++.. .+|..+..+++|++|+|++|.++...+..+.. ..|++|++++|.+.. ++..+..+
T Consensus 90 L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 169 (461)
T 1z7x_W 90 LSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAK 169 (461)
T ss_dssp EECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHC
T ss_pred EEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhC
Confidence 5666666663 45666677777777777777765433332221 136667777766654 34555666
Q ss_pred ccCcEEeecccccccCCCcccc-----CCCCCCEEEccCCccCcc----CchhhhcccccceeeeecccccCcCc-----
Q 043333 67 STLADLTLEFNQFSGDLPAELG-----NLINLEKLHLNSNNFTGK----LPESFANLTRLKHFRISDNHFTGQIP----- 132 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p----- 132 (809)
++|++|+|++|.++...+..+. .+++|++|+|++|+++.. ++..+..+++|++|+|++|+++....
T Consensus 170 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~ 249 (461)
T 1z7x_W 170 PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCP 249 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHH
Confidence 7777777777777644333332 255777777777777753 45666677777777777777764322
Q ss_pred hhhhcccccceEecccCcCCCC----CCccccCCCCCCEEeccCCCCCCCCCcccc-----CCcCCceeeeccccccCC-
Q 043333 133 DYIQNWTKLEKLFIEGSGLAGP----IPSGIASLVELTDLRISDLNGPEGPFPRLS-----NLKNMNYLILRSGNIIGE- 202 (809)
Q Consensus 133 ~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~-----~l~~L~~L~Ls~N~l~~~- 202 (809)
..+..+++|++|+|++|+++.. ++..+..+++|+.|++++|.+.......+. ..++|+.|+|++|.+++.
T Consensus 250 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 329 (461)
T 1z7x_W 250 GLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC 329 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH
Confidence 2223467777777777777743 455666677777788777776554433332 235788888888877765
Q ss_pred ---CChhhhccccccEEeccCCCCCCCCCCCCC------CCCccEEEeeCccCCC----CCChhhhh-ccCccccccCCc
Q 043333 203 ---MPEYLGQMIGLRVLDLSFNKLSGVIPSNFS------GSGLTYMYLTGNLLTG----PVPDWIVR-KRNKHIDLSYNN 268 (809)
Q Consensus 203 ---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------~~~L~~L~Ls~N~l~~----~~p~~~~~-~~l~~L~Ls~N~ 268 (809)
++..+..+++|+.|+|++|++++..+..+. .++|+.|+|++|.+++ .+|..+.. ..++.|+|++|+
T Consensus 330 ~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 330 CSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 456666778888888888887765443332 3578888888888875 55555433 566888888887
Q ss_pred ccc
Q 043333 269 FID 271 (809)
Q Consensus 269 l~~ 271 (809)
++.
T Consensus 410 i~~ 412 (461)
T 1z7x_W 410 LGD 412 (461)
T ss_dssp CCH
T ss_pred CCH
Confidence 765
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=4.6e-24 Score=234.84 Aligned_cols=253 Identities=15% Similarity=0.126 Sum_probs=178.3
Q ss_pred ccccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCchhhcCCc-cCcEEeecccccc
Q 043333 2 RILKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPKAVASIS-TLADLTLEFNQFS 80 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~~l~~l~-~L~~L~L~~N~l~ 80 (809)
+.|++|++++.+|..+...++|++|||++|.++...+.. +...+..++ +|++|+|++|.++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~------------------l~~~l~~~~~~L~~L~Ls~N~l~ 64 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVE------------------LIQAFANTPASVTSLNLSGNSLG 64 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHH------------------HHHHHHTCCTTCCEEECCSSCGG
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHH------------------HHHHHHhCCCceeEEECcCCCCC
Confidence 568889999988888888888999999999988544311 113456666 7888888888888
Q ss_pred cCCCccccCC-----CCCCEEEccCCccCccCchhhhcc-----cccceeeeecccccCcCchhhhc-----ccccceEe
Q 043333 81 GDLPAELGNL-----INLEKLHLNSNNFTGKLPESFANL-----TRLKHFRISDNHFTGQIPDYIQN-----WTKLEKLF 145 (809)
Q Consensus 81 ~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~ 145 (809)
+..+..+..+ ++|++|+|++|++++..+..+..+ ++|++|+|++|++++..+..+.. .++|++|+
T Consensus 65 ~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~ 144 (362)
T 3goz_A 65 FKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLN 144 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEE
T ss_pred HHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEE
Confidence 7666666654 788888888888887666655443 78888888888887666655543 25888888
Q ss_pred cccCcCCCCCCc----cccCCC-CCCEEeccCCCCCCCCCccc----cCC-cCCceeeeccccccCC----CChhhhc-c
Q 043333 146 IEGSGLAGPIPS----GIASLV-ELTDLRISDLNGPEGPFPRL----SNL-KNMNYLILRSGNIIGE----MPEYLGQ-M 210 (809)
Q Consensus 146 L~~N~l~~~~p~----~~~~l~-~L~~L~l~~n~l~~~~~~~l----~~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l 210 (809)
|++|+++...+. .+..++ +|+.|++++|.++......+ ..+ ++|+.|+|++|.+... ++..+.. .
T Consensus 145 Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~ 224 (362)
T 3goz_A 145 LRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIP 224 (362)
T ss_dssp CTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSC
T ss_pred ccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCC
Confidence 888888754433 334454 78888888888877765443 344 5888888888888774 3445555 3
Q ss_pred ccccEEeccCCCCCCCCCC----CCCC-CCccEEEeeCccCCCCCChhhh--------hccCccccccCCccccC
Q 043333 211 IGLRVLDLSFNKLSGVIPS----NFSG-SGLTYMYLTGNLLTGPVPDWIV--------RKRNKHIDLSYNNFIDG 272 (809)
Q Consensus 211 ~~L~~L~Ls~N~l~~~~p~----~~~~-~~L~~L~Ls~N~l~~~~p~~~~--------~~~l~~L~Ls~N~l~~~ 272 (809)
++|+.|+|++|+|++..+. .+.. ++|+.|+|++|.+.+..+..+. ..+++.||+++|++...
T Consensus 225 ~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 225 NHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp TTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 5888888888888876552 2233 7888888888886655544222 13467788888887653
No 333
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.88 E-value=1e-25 Score=256.08 Aligned_cols=273 Identities=18% Similarity=0.174 Sum_probs=196.2
Q ss_pred ccccCCCCCc----cCCccCCCCCCCCEEEccCCCCCCCCCcccC-CC-----CccccccccccCC-----CCchhhcCC
Q 043333 2 RILKSQNLPG----RLPPELTRLPFLQEIDLTRNYLNGTIPSEWA-SL-----PLVNLPLWKQANG-----AIPKAVASI 66 (809)
Q Consensus 2 L~L~~nnl~~----~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-~l-----~L~~L~l~~n~~~-----~ip~~l~~l 66 (809)
|+|++|++.. .++..+..+++|++|+|++|.++...+..+. .+ .|++|++++|.++ .+|..+..+
T Consensus 33 L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 112 (461)
T 1z7x_W 33 VRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTL 112 (461)
T ss_dssp EEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSC
T ss_pred EEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccC
Confidence 6777777764 4566677778888888888887754333322 22 3788888888877 457778888
Q ss_pred ccCcEEeecccccccCCCccc-----cCCCCCCEEEccCCccCccC----chhhhcccccceeeeecccccCcCchhhhc
Q 043333 67 STLADLTLEFNQFSGDLPAEL-----GNLINLEKLHLNSNNFTGKL----PESFANLTRLKHFRISDNHFTGQIPDYIQN 137 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 137 (809)
++|++|+|++|.+++..+..+ ..+++|++|+|++|++++.. +..+..+++|++|+|++|.+....+..+..
T Consensus 113 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 192 (461)
T 1z7x_W 113 PTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQ 192 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHH
Confidence 888888888888875434332 23567888888888888633 556667788888888888887555544433
Q ss_pred -----ccccceEecccCcCCCC----CCccccCCCCCCEEeccCCCCCCCCCcc-----ccCCcCCceeeeccccccCC-
Q 043333 138 -----WTKLEKLFIEGSGLAGP----IPSGIASLVELTDLRISDLNGPEGPFPR-----LSNLKNMNYLILRSGNIIGE- 202 (809)
Q Consensus 138 -----l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~~~~~-----l~~l~~L~~L~Ls~N~l~~~- 202 (809)
.++|+.|+|++|+++.. ++..+..+++|+.|++++|.+....... +..+++|++|+|++|+++..
T Consensus 193 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~ 272 (461)
T 1z7x_W 193 GLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKG 272 (461)
T ss_dssp HHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHH
Confidence 56888999999888864 4667778889999999998876644322 23578899999999988875
Q ss_pred ---CChhhhccccccEEeccCCCCCCCCCCCCC-----C-CCccEEEeeCccCCCCC----Chhhhh-ccCccccccCCc
Q 043333 203 ---MPEYLGQMIGLRVLDLSFNKLSGVIPSNFS-----G-SGLTYMYLTGNLLTGPV----PDWIVR-KRNKHIDLSYNN 268 (809)
Q Consensus 203 ---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~-~~L~~L~Ls~N~l~~~~----p~~~~~-~~l~~L~Ls~N~ 268 (809)
++..+..+++|++|+|++|.+++..+..+. . ++|+.|+|++|.+++.. +..+.. ..++.|+|++|+
T Consensus 273 ~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 352 (461)
T 1z7x_W 273 CGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNR 352 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSB
T ss_pred HHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCc
Confidence 577778889999999999988654433222 1 58899999999888653 333332 577888999998
Q ss_pred cccCCC
Q 043333 269 FIDGSS 274 (809)
Q Consensus 269 l~~~~~ 274 (809)
++...+
T Consensus 353 i~~~~~ 358 (461)
T 1z7x_W 353 LEDAGV 358 (461)
T ss_dssp CHHHHH
T ss_pred cccccH
Confidence 876543
No 334
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=8.1e-24 Score=230.08 Aligned_cols=250 Identities=16% Similarity=0.177 Sum_probs=177.2
Q ss_pred CCCEEEccCCCCCCCCCcccCCC---CccccccccccCCCCchhhcCCccCcEEeecccccccC-CCccccCCCCCCEEE
Q 043333 22 FLQEIDLTRNYLNGTIPSEWASL---PLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGD-LPAELGNLINLEKLH 97 (809)
Q Consensus 22 ~L~~L~Ls~n~l~~~~p~~~~~l---~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ 97 (809)
.+++||+++|.+. +..+..+ .++.|++.+|.+...+..+..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 3677777777766 2333332 36677777777777766677788888888888888755 677778888888888
Q ss_pred ccCCccCccCchhhhcccccceeeeecc-cccCc-CchhhhcccccceEecccC-cCCCC-CCccccCCC-CCCEEeccC
Q 043333 98 LNSNNFTGKLPESFANLTRLKHFRISDN-HFTGQ-IPDYIQNWTKLEKLFIEGS-GLAGP-IPSGIASLV-ELTDLRISD 172 (809)
Q Consensus 98 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~l~~ 172 (809)
|++|++++..+..++.+++|++|+|++| .+++. ++..+.++++|++|+|++| .+++. ++..+..++ +|+.|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 8888888777778888888888888888 56642 5666778888888888888 77753 466677788 888888888
Q ss_pred C--CCCCCC-CccccCCcCCceeeecccc-ccCCCChhhhccccccEEeccCCCCCCCCCC---CCCC-CCccEEEeeCc
Q 043333 173 L--NGPEGP-FPRLSNLKNMNYLILRSGN-IIGEMPEYLGQMIGLRVLDLSFNKLSGVIPS---NFSG-SGLTYMYLTGN 244 (809)
Q Consensus 173 n--~l~~~~-~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~-~~L~~L~Ls~N 244 (809)
| .++... +..+.++++|+.|+|++|. ++...+..+..+++|+.|+|++|. +..+. .+.. ++|+.|+|++|
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 8 343221 2345678888888888888 666777788888888888888885 23333 2333 88888888888
Q ss_pred cCCCCCChhhhhccCccccccCCccccCCCCCcc
Q 043333 245 LLTGPVPDWIVRKRNKHIDLSYNNFIDGSSDSNC 278 (809)
Q Consensus 245 ~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~~~~~~ 278 (809)
++...-..+. ..+..|++++|++++..+....
T Consensus 283 -i~~~~~~~l~-~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 283 -VPDGTLQLLK-EALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp -SCTTCHHHHH-HHSTTSEESCCCSCCTTCSSCS
T ss_pred -cCHHHHHHHH-hhCcceEEecccCccccCCccc
Confidence 3322211111 2467888888888887665554
No 335
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.87 E-value=4.8e-21 Score=224.00 Aligned_cols=218 Identities=22% Similarity=0.188 Sum_probs=178.1
Q ss_pred CCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCC
Q 043333 22 FLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSN 101 (809)
Q Consensus 22 ~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 101 (809)
++++|++++|.|+ .+|..+. -.|+.|++++|.+..||. .+++|++|+|++|+|+ .+|. .+++|++|+|++|
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~-~~L~~L~L~~N~l~~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N 111 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP-AHITTLVIPDNNLTSLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSN 111 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC-TTCSEEEECSCCCSCCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSC
T ss_pred CCcEEEecCCCcC-ccChhhC-CCCcEEEecCCCCCCCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCC
Confidence 5899999999999 6777665 458999999999999998 6789999999999999 5665 6799999999999
Q ss_pred ccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCc
Q 043333 102 NFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFP 181 (809)
Q Consensus 102 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 181 (809)
+|++ +|. .+++|+.|+|++|+|++ +|.. +++|++|+|++|++++ +|. .+.+|+.|++++|.++.++
T Consensus 112 ~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l~-- 177 (622)
T 3g06_A 112 PLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTSLP-- 177 (622)
T ss_dssp CCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCC--
T ss_pred cCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCCCc--
Confidence 9995 454 67899999999999995 6653 5899999999999995 454 3578999999999999987
Q ss_pred cccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhhccCcc
Q 043333 182 RLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVRKRNKH 261 (809)
Q Consensus 182 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~l~~ 261 (809)
..+++|+.|+|++|++++..+ .+++|+.|++++|.|+.++.. .++|+.|+|++|.|++. |.. ..+++.
T Consensus 178 --~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~l-p~~--l~~L~~ 245 (622)
T 3g06_A 178 --MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTSL-PVL--PSELKE 245 (622)
T ss_dssp --CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCC-CCC--CTTCCE
T ss_pred --ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCcccccCCC---CCCCCEEEccCCccCcC-CCC--CCcCcE
Confidence 567899999999999987433 247888888888888865432 27788888888888863 322 256788
Q ss_pred ccccCCccccCCC
Q 043333 262 IDLSYNNFIDGSS 274 (809)
Q Consensus 262 L~Ls~N~l~~~~~ 274 (809)
|+|++|.++..+.
T Consensus 246 L~Ls~N~L~~lp~ 258 (622)
T 3g06_A 246 LMVSGNRLTSLPM 258 (622)
T ss_dssp EECCSSCCSCCCC
T ss_pred EECCCCCCCcCCc
Confidence 8888888886544
No 336
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=8.6e-22 Score=211.63 Aligned_cols=173 Identities=25% Similarity=0.363 Sum_probs=105.5
Q ss_pred hcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccc
Q 043333 63 VASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLE 142 (809)
Q Consensus 63 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 142 (809)
+..+++|++|+|++|.+++ ++. +..+++|++|+|++|++++ ++ .+..+++|++|+|++|++++ ++. +..+++|+
T Consensus 59 ~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~ 132 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQ 132 (308)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCC
T ss_pred hhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCC
Confidence 4455666666666666663 333 6666666666666666663 23 46666666666666666664 232 66666666
Q ss_pred eEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCC
Q 043333 143 KLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNK 222 (809)
Q Consensus 143 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 222 (809)
.|+|++|++++..+ +..+++|+.|++++|.+..++. +..+++|+.|+|++|++.+..+ +..+++|+.|+|++|+
T Consensus 133 ~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 133 VLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred EEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 66666666664322 5666666666666666665443 6666666666666666665543 6666677777777777
Q ss_pred CCCCCCCCCCCCCccEEEeeCccCCC
Q 043333 223 LSGVIPSNFSGSGLTYMYLTGNLLTG 248 (809)
Q Consensus 223 l~~~~p~~~~~~~L~~L~Ls~N~l~~ 248 (809)
+++.++ ....++|+.|+|++|++++
T Consensus 207 l~~~~~-l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVSP-LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCGG-GTTCTTCCEEEEEEEEEEC
T ss_pred cCcccc-ccCCCCCCEEEccCCeeec
Confidence 766553 2223667777777776664
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=5.6e-22 Score=213.10 Aligned_cols=208 Identities=20% Similarity=0.270 Sum_probs=179.6
Q ss_pred ccCCCCCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccccC
Q 043333 4 LKSQNLPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGD 82 (809)
Q Consensus 4 L~~nnl~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~ 82 (809)
+..+++...++ +..+++|++|++++|.++. ++ .+..++ |+.|++++|.+..++. +..+++|++|+|++|.+++
T Consensus 26 l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~- 99 (308)
T 1h6u_A 26 AGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKN- 99 (308)
T ss_dssp TTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSC-
T ss_pred hCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCC-
Confidence 44455554332 4568899999999999985 44 566665 9999999999999988 9999999999999999995
Q ss_pred CCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCC
Q 043333 83 LPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASL 162 (809)
Q Consensus 83 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 162 (809)
++ .+..+++|++|+|++|++++ ++ .+..+++|++|+|++|++++..+ +..+++|+.|+|++|++++..+ +..+
T Consensus 100 ~~-~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l 172 (308)
T 1h6u_A 100 VS-AIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANL 172 (308)
T ss_dssp CG-GGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTC
T ss_pred ch-hhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCC
Confidence 44 69999999999999999996 44 39999999999999999996544 8999999999999999996443 8999
Q ss_pred CCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCC
Q 043333 163 VELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIP 228 (809)
Q Consensus 163 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 228 (809)
++|+.|++++|.+..++. +..+++|+.|+|++|++.+..+ +..+++|+.|+|++|++++.+.
T Consensus 173 ~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 173 SKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCCE
T ss_pred CCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCCe
Confidence 999999999999998764 8999999999999999998774 8999999999999999986543
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=4.8e-24 Score=236.79 Aligned_cols=243 Identities=19% Similarity=0.183 Sum_probs=158.6
Q ss_pred cCCccCCCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCchhhcCCccCcEEeeccc---ccccCCCccc-
Q 043333 12 RLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPKAVASISTLADLTLEFN---QFSGDLPAEL- 87 (809)
Q Consensus 12 ~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N---~l~~~~p~~~- 87 (809)
.++..+..+++|++|+|++|.++...+.. ++..+..+++|++|+|++| ++++.+|..+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~------------------l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~ 84 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARW------------------LSENIASKKDLEIAEFSDIFTGRVKDEIPEALR 84 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHH------------------HHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHH------------------HHHHHHhCCCccEEeCcccccCccccchhHHHH
Confidence 56677778888999999999887543322 2233455667777777764 3444444443
Q ss_pred ------cCCCCCCEEEccCCccCc----cCchhhhcccccceeeeecccccCcCchhhh----cc---------cccceE
Q 043333 88 ------GNLINLEKLHLNSNNFTG----KLPESFANLTRLKHFRISDNHFTGQIPDYIQ----NW---------TKLEKL 144 (809)
Q Consensus 88 ------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L 144 (809)
..+++|++|+|++|+++. .+|..+.++++|++|+|++|.++...+..+. .+ ++|++|
T Consensus 85 ~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L 164 (386)
T 2ca6_A 85 LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSI 164 (386)
T ss_dssp HHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred HHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEE
Confidence 566777777777777775 3566667777777777777777643333333 33 677777
Q ss_pred ecccCcCC-CCCC---ccccCCCCCCEEeccCCCCCCC-----CCccccCCcCCceeeecccccc----CCCChhhhccc
Q 043333 145 FIEGSGLA-GPIP---SGIASLVELTDLRISDLNGPEG-----PFPRLSNLKNMNYLILRSGNII----GEMPEYLGQMI 211 (809)
Q Consensus 145 ~L~~N~l~-~~~p---~~~~~l~~L~~L~l~~n~l~~~-----~~~~l~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~ 211 (809)
+|++|+++ +.++ ..+..+++|+.|++++|.+... ....+..+++|+.|+|++|.++ ..+|..+..++
T Consensus 165 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 165 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred ECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 77777776 2333 3555667777777777766532 1125667777777777777775 55677777777
Q ss_pred cccEEeccCCCCCCC----CCCCC---CCCCccEEEeeCccCCC----CCChhh-hh-ccCccccccCCccccC
Q 043333 212 GLRVLDLSFNKLSGV----IPSNF---SGSGLTYMYLTGNLLTG----PVPDWI-VR-KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 212 ~L~~L~Ls~N~l~~~----~p~~~---~~~~L~~L~Ls~N~l~~----~~p~~~-~~-~~l~~L~Ls~N~l~~~ 272 (809)
+|+.|+|++|+|++. ++..+ ..++|+.|+|++|.+++ .+|..+ .. .+++.|+|++|++++.
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 888888888877655 33332 13777888888888776 355555 32 6677888888877654
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=1.5e-21 Score=209.98 Aligned_cols=222 Identities=19% Similarity=0.161 Sum_probs=158.9
Q ss_pred CCCEEEccCCCCCCCCC----cccCCCCccccccccccCC-CCchhh--cCCccCcEEeecccccccCCC----ccccCC
Q 043333 22 FLQEIDLTRNYLNGTIP----SEWASLPLVNLPLWKQANG-AIPKAV--ASISTLADLTLEFNQFSGDLP----AELGNL 90 (809)
Q Consensus 22 ~L~~L~Ls~n~l~~~~p----~~~~~l~L~~L~l~~n~~~-~ip~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~l 90 (809)
.++.|++.++.+..... ..+....|++|++++|.+. .+|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 46777777777653111 1111223777888777765 446666 778888888888888886555 344567
Q ss_pred CCCCEEEccCCccCccCchhhhcccccceeeeecccccCc--C--chhhhcccccceEecccCcCCCCCCc----cccCC
Q 043333 91 INLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQ--I--PDYIQNWTKLEKLFIEGSGLAGPIPS----GIASL 162 (809)
Q Consensus 91 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l 162 (809)
++|++|+|++|++++..|..|+++++|++|+|++|++.+. + +..+..+++|++|+|++|+++ .++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 8888888888888877777888888888888888887642 2 222467788888888888886 3333 24677
Q ss_pred CCCCEEeccCCCCCCCCCccccCC---cCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEE
Q 043333 163 VELTDLRISDLNGPEGPFPRLSNL---KNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYM 239 (809)
Q Consensus 163 ~~L~~L~l~~n~l~~~~~~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L 239 (809)
++|++|++++|.+....+..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|+|++. |.....++|+.|
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L 299 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNL 299 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCE
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEE
Confidence 888888888888888765555555 68889999988888 4565553 7899999999999876 333334889999
Q ss_pred EeeCccCCC
Q 043333 240 YLTGNLLTG 248 (809)
Q Consensus 240 ~Ls~N~l~~ 248 (809)
+|++|+++.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 999999874
No 340
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=3.2e-22 Score=211.91 Aligned_cols=151 Identities=18% Similarity=0.088 Sum_probs=120.2
Q ss_pred HHHHHhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcc------------------cchhHHHHHHHHhhcCC
Q 043333 569 QIKAATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQ------------------GNREFVNEIGMISALQH 630 (809)
Q Consensus 569 ~l~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~------------------~~~~f~~Ei~~l~~l~H 630 (809)
.+......|...+.||+|+||.||+|...+|+.||||+++..... ....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 334445567777999999999999999977999999998643211 2345889999999999
Q ss_pred CceEeEEeEEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 043333 631 PNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVL 710 (809)
Q Consensus 631 ~nIv~l~~~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NIL 710 (809)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+. +|+||||||+|||
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 4 666665543 45699999999999998 511 12446999999999999998 8999999999999
Q ss_pred EcCCCceEEEecCCccccCCCCcceeccccccccccchhhhc
Q 043333 711 LDKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAM 752 (809)
Q Consensus 711 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 752 (809)
++ ++.+||+|||+|+. +..|+|||++.
T Consensus 226 l~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 99 99999999999863 23578999874
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=6.7e-23 Score=222.79 Aligned_cols=248 Identities=19% Similarity=0.224 Sum_probs=200.2
Q ss_pred ccccCCCCCccCCccCCCC--CCCCEEEccCCCCCCCCCcccCCCCccccccccccCCC--CchhhcCCccCcEEeeccc
Q 043333 2 RILKSQNLPGRLPPELTRL--PFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGA--IPKAVASISTLADLTLEFN 77 (809)
Q Consensus 2 L~L~~nnl~~~lp~~l~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~--ip~~l~~l~~L~~L~L~~N 77 (809)
++++++++. |..+..+ ++++.|++++|.+.+..+..+....|+.|++++|.+.. +|..+..+++|++|+|++|
T Consensus 52 l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~ 128 (336)
T 2ast_B 52 LDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL 128 (336)
T ss_dssp EECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTC
T ss_pred eccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCc
Confidence 567777766 4556666 88999999999999877775544459999999988764 7888899999999999999
Q ss_pred ccccCCCccccCCCCCCEEEccCC-ccCc-cCchhhhcccccceeeeecc-cccCc-Cchhhhccc-ccceEecccC--c
Q 043333 78 QFSGDLPAELGNLINLEKLHLNSN-NFTG-KLPESFANLTRLKHFRISDN-HFTGQ-IPDYIQNWT-KLEKLFIEGS--G 150 (809)
Q Consensus 78 ~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~L~~N--~ 150 (809)
.+++..+..++.+++|++|+|++| .+++ .++..+.++++|++|+|++| .+++. ++..+..++ +|++|+|++| .
T Consensus 129 ~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~ 208 (336)
T 2ast_B 129 RLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKN 208 (336)
T ss_dssp BCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGG
T ss_pred ccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCccc
Confidence 998888888999999999999999 6875 36777889999999999999 88854 677788999 9999999999 4
Q ss_pred CC-CCCCccccCCCCCCEEeccCCC-CCCCCCccccCCcCCceeeecccc-ccCCCChhhhccccccEEeccCCCCCCCC
Q 043333 151 LA-GPIPSGIASLVELTDLRISDLN-GPEGPFPRLSNLKNMNYLILRSGN-IIGEMPEYLGQMIGLRVLDLSFNKLSGVI 227 (809)
Q Consensus 151 l~-~~~p~~~~~l~~L~~L~l~~n~-l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 227 (809)
++ +.+|..+..+++|+.|++++|. ++...+..+.++++|+.|+|++|. +.......+.++++|+.|+|++| ++
T Consensus 209 ~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~--- 284 (336)
T 2ast_B 209 LQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP--- 284 (336)
T ss_dssp SCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---
T ss_pred CCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---
Confidence 55 4556777889999999999998 676777788999999999999996 22222236888999999999999 32
Q ss_pred CCCCCC--CCccEEEeeCccCCCCCChhhhh
Q 043333 228 PSNFSG--SGLTYMYLTGNLLTGPVPDWIVR 256 (809)
Q Consensus 228 p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~ 256 (809)
...+.. .+|+.|++++|++++..|..+..
T Consensus 285 ~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 285 DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 222322 45788889999999988877654
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=9.9e-21 Score=207.19 Aligned_cols=239 Identities=16% Similarity=0.110 Sum_probs=178.6
Q ss_pred CEEEccCCCCCCCCCcccCCCCccccccccccCCCCch-hhcCCccCcEEeecccccccCCC-ccccCCCCCCE-EEccC
Q 043333 24 QEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPK-AVASISTLADLTLEFNQFSGDLP-AELGNLINLEK-LHLNS 100 (809)
Q Consensus 24 ~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~-~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~ 100 (809)
++++.++++++ .+|..+. -.+++|++++|.++.||. +|.++++|++|+|++|++.+.+| ..|.++++|++ +.++.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~-~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP-RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC-TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC-CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 56777777777 4555442 136677777777777775 57888999999999999866555 46888888775 66677
Q ss_pred CccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEeccc-CcCCCCCCccccCCC-CCCEEeccCCCCCCC
Q 043333 101 NNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEG-SGLAGPIPSGIASLV-ELTDLRISDLNGPEG 178 (809)
Q Consensus 101 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~ 178 (809)
|+++.+.|..|.++++|++|++++|+|+...+..+....++..|++.+ |++....+..|..+. .|+.|++++|.++.+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 899988788899999999999999999877777777778888888865 567755566777765 688899999999988
Q ss_pred CCccccCCcCCceeeeccc-cccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhhc
Q 043333 179 PFPRLSNLKNMNYLILRSG-NIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVRK 257 (809)
Q Consensus 179 ~~~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~ 257 (809)
+...|. ..+|+.|++++| .+....++.|.++++|+.|||++|+|+.+++..+ .+|+.|.+.++.--..+|..-...
T Consensus 170 ~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~--~~L~~L~~l~~~~l~~lP~l~~l~ 246 (350)
T 4ay9_X 170 HNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL--ENLKKLRARSTYNLKKLPTLEKLV 246 (350)
T ss_dssp CTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC--TTCCEEECTTCTTCCCCCCTTTCC
T ss_pred Chhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh--ccchHhhhccCCCcCcCCCchhCc
Confidence 876664 467999999864 4554445678999999999999999998877654 466777765554444566544446
Q ss_pred cCccccccCC
Q 043333 258 RNKHIDLSYN 267 (809)
Q Consensus 258 ~l~~L~Ls~N 267 (809)
+++.++++++
T Consensus 247 ~L~~l~l~~~ 256 (350)
T 4ay9_X 247 ALMEASLTYP 256 (350)
T ss_dssp SCCEEECSCH
T ss_pred ChhhCcCCCC
Confidence 6777787643
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=9.5e-23 Score=226.34 Aligned_cols=236 Identities=19% Similarity=0.240 Sum_probs=185.5
Q ss_pred CccccCCCCCcc----CCccCCCCCCCCEEEccCCCCC---CCCCcccCCCCccccccccccCCCCchhhcCCccCcEEe
Q 043333 1 HRILKSQNLPGR----LPPELTRLPFLQEIDLTRNYLN---GTIPSEWASLPLVNLPLWKQANGAIPKAVASISTLADLT 73 (809)
Q Consensus 1 ~L~L~~nnl~~~----lp~~l~~l~~L~~L~Ls~n~l~---~~~p~~~~~l~L~~L~l~~n~~~~ip~~l~~l~~L~~L~ 73 (809)
+|+|++|++... ++..|..+++|++|+|++|.+. +.+|..+ ..+...+..+++|++|+
T Consensus 36 ~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~---------------~~l~~~l~~~~~L~~L~ 100 (386)
T 2ca6_A 36 EIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEAL---------------RLLLQALLKCPKLHTVR 100 (386)
T ss_dssp EEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHH---------------HHHHHHHTTCTTCCEEE
T ss_pred EEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHH---------------HHHHHHHhhCCcccEEE
Confidence 478999999876 4455889999999999997655 2223221 12234557889999999
Q ss_pred eccccccc----CCCccccCCCCCCEEEccCCccCccCchhhh----cc---------cccceeeeeccccc-CcCc---
Q 043333 74 LEFNQFSG----DLPAELGNLINLEKLHLNSNNFTGKLPESFA----NL---------TRLKHFRISDNHFT-GQIP--- 132 (809)
Q Consensus 74 L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p--- 132 (809)
|++|.+++ .+|..+..+++|++|+|++|.|+...+..+. .+ ++|++|+|++|+++ +.++
T Consensus 101 Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 180 (386)
T 2ca6_A 101 LSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 180 (386)
T ss_dssp CCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHH
Confidence 99999986 4677888999999999999999854444444 44 89999999999997 4455
Q ss_pred hhhhcccccceEecccCcCCC-----CCCccccCCCCCCEEeccCCCCC----CCCCccccCCcCCceeeeccccccCC-
Q 043333 133 DYIQNWTKLEKLFIEGSGLAG-----PIPSGIASLVELTDLRISDLNGP----EGPFPRLSNLKNMNYLILRSGNIIGE- 202 (809)
Q Consensus 133 ~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~l~~n~l~----~~~~~~l~~l~~L~~L~Ls~N~l~~~- 202 (809)
..+..+++|+.|+|++|+++. ..|..+..+++|+.|+|++|.++ ..-+..+..+++|+.|+|++|.+.+.
T Consensus 181 ~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 260 (386)
T 2ca6_A 181 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARG 260 (386)
T ss_dssp HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHH
T ss_pred HHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhh
Confidence 467788999999999999872 34457888999999999999985 22234678899999999999999877
Q ss_pred ---CChhhhc--cccccEEeccCCCCCC----CCCCCC-C-CCCccEEEeeCccCCCCCC
Q 043333 203 ---MPEYLGQ--MIGLRVLDLSFNKLSG----VIPSNF-S-GSGLTYMYLTGNLLTGPVP 251 (809)
Q Consensus 203 ---~p~~~~~--l~~L~~L~Ls~N~l~~----~~p~~~-~-~~~L~~L~Ls~N~l~~~~p 251 (809)
++..+.. +++|+.|+|++|+|++ .+|..+ . .++|+.|+|++|++++..+
T Consensus 261 ~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 261 AAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 5666644 8999999999999998 355554 4 3899999999999998775
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=1.2e-20 Score=206.64 Aligned_cols=216 Identities=18% Similarity=0.153 Sum_probs=175.4
Q ss_pred ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCc-hhhhcccccce-eeee
Q 043333 46 LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLP-ESFANLTRLKH-FRIS 123 (809)
Q Consensus 46 L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls 123 (809)
...++.+++.+.+||..+. +++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. +.++
T Consensus 11 ~~~v~C~~~~Lt~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 11 NRVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TTEEEEESTTCCSCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CCEEEecCCCCCccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 4567778889999998773 689999999999996556689999999999999999876555 46888988775 6777
Q ss_pred cccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccC-CCCCCCCCccccCCc-CCceeeeccccccC
Q 043333 124 DNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISD-LNGPEGPFPRLSNLK-NMNYLILRSGNIIG 201 (809)
Q Consensus 124 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~l~-~L~~L~Ls~N~l~~ 201 (809)
.|+|+...|..|.++++|+.|++++|+++...+..+....++..|++.+ +.+..++...|..+. .++.|+|++|+++.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 8999988888999999999999999999977777777888888999865 678888888888775 68899999999987
Q ss_pred CCChhhhccccccEEeccC-CCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhhccCccccccC
Q 043333 202 EMPEYLGQMIGLRVLDLSF-NKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSY 266 (809)
Q Consensus 202 ~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~ 266 (809)
+.+..|. ..+|+.|++++ |.++.++++.|.. ++|+.|+|++|+|+..++..+. .++.|.+.+
T Consensus 169 i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~--~L~~L~~l~ 232 (350)
T 4ay9_X 169 IHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE--NLKKLRARS 232 (350)
T ss_dssp ECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT--TCCEEECTT
T ss_pred CChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc--cchHhhhcc
Confidence 6666664 56899999974 7788777778777 9999999999999977665543 445554433
No 345
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=2e-20 Score=188.78 Aligned_cols=177 Identities=16% Similarity=0.141 Sum_probs=114.6
Q ss_pred cEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccC
Q 043333 70 ADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGS 149 (809)
Q Consensus 70 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 149 (809)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45556666665 344333 245666666666666555555666666666666666666554555566666666666666
Q ss_pred cCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCC
Q 043333 150 GLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPS 229 (809)
Q Consensus 150 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 229 (809)
++++..+..|..+++|+.|++++|.++.++...|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~-- 164 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC-- 164 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT--
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC--
Confidence 666554555666666666666666666666666667777777777777777766666777777777777777766432
Q ss_pred CCCCCCccEEEeeCccCCCCCChhhh
Q 043333 230 NFSGSGLTYMYLTGNLLTGPVPDWIV 255 (809)
Q Consensus 230 ~~~~~~L~~L~Ls~N~l~~~~p~~~~ 255 (809)
++|++|+++.|+++|.+|..+.
T Consensus 165 ----~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 165 ----PGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp ----TTTHHHHHHHHHCTTTBBCTTS
T ss_pred ----CCHHHHHHHHHhCCceeeccCc
Confidence 4677777777777777776654
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=2.3e-20 Score=215.57 Aligned_cols=185 Identities=20% Similarity=0.233 Sum_probs=100.9
Q ss_pred cCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecc
Q 043333 68 TLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIE 147 (809)
Q Consensus 68 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 147 (809)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 56666666666663 444332 45666666666666 444 334566666666666664 444 433 66666666
Q ss_pred cCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCC
Q 043333 148 GSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVI 227 (809)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 227 (809)
+|+|++ +|. .+++|+.|++++|.++.++. .+++|+.|+|++|++++ +|. |. ++|+.|+|++|+|+.++
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp 196 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLP 196 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchh
Confidence 666664 444 45566666666666665443 45566666666666655 333 43 56666666666666333
Q ss_pred CCCCCCCCc-------cEEEeeCccCCCCCChhhhhccCccccccCCccccCCCCCcc
Q 043333 228 PSNFSGSGL-------TYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDGSSDSNC 278 (809)
Q Consensus 228 p~~~~~~~L-------~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~~~~~~ 278 (809)
+ +.. +| +.|+|++|+|+.+++.......++.|+|++|++++..+..++
T Consensus 197 ~--~~~-~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 197 A--VPV-RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp C--CC---------CCEEEECCSSCCCCCCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred h--HHH-hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 3 222 45 666666666664333333334556666666666554444333
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=2.6e-20 Score=187.99 Aligned_cols=176 Identities=22% Similarity=0.268 Sum_probs=131.8
Q ss_pred cccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeeccccc
Q 043333 49 LPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFT 128 (809)
Q Consensus 49 L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 128 (809)
++..++.+..+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 12 v~c~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 89 (208)
T 2o6s_A 12 VECYSQGRTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ 89 (208)
T ss_dssp EECCSSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred EEecCCCccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC
Confidence 334444444555433 247888888888888666666778888888888888888666666778888888888888888
Q ss_pred CcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhh
Q 043333 129 GQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLG 208 (809)
Q Consensus 129 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 208 (809)
+..+..|.++++|++|+|++|++++..+..|..+++|+.|++++|.++.++...+..+++|+.|+|++|.+.+.
T Consensus 90 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------ 163 (208)
T 2o6s_A 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------ 163 (208)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC------
T ss_pred ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC------
Confidence 66666678888888888888888866666677888888888888888877777788888888888888877643
Q ss_pred ccccccEEeccCCCCCCCCCCCCCC
Q 043333 209 QMIGLRVLDLSFNKLSGVIPSNFSG 233 (809)
Q Consensus 209 ~l~~L~~L~Ls~N~l~~~~p~~~~~ 233 (809)
+++|+.|+++.|+++|.+|..+..
T Consensus 164 -~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 164 -CPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp -TTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred -CCCHHHHHHHHHhCCceeeccCcc
Confidence 457888888888888888876553
No 348
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.82 E-value=5.1e-21 Score=210.51 Aligned_cols=214 Identities=18% Similarity=0.184 Sum_probs=174.0
Q ss_pred CchhhcCCccCcEEeecccccccCCC----ccccCCC-CCCEEEccCCccCccCchhhhcc-----cccceeeeeccccc
Q 043333 59 IPKAVASISTLADLTLEFNQFSGDLP----AELGNLI-NLEKLHLNSNNFTGKLPESFANL-----TRLKHFRISDNHFT 128 (809)
Q Consensus 59 ip~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~ 128 (809)
+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|+|++..+..+..+ ++|++|+|++|+++
T Consensus 14 ~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 93 (362)
T 3goz_A 14 VEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLS 93 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG
T ss_pred HHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCC
Confidence 34444555679999999999997766 7788898 99999999999998888888886 99999999999999
Q ss_pred CcCchhhhcc-----cccceEecccCcCCCCCCccccC-----CCCCCEEeccCCCCCCCCCccc----cCCc-CCceee
Q 043333 129 GQIPDYIQNW-----TKLEKLFIEGSGLAGPIPSGIAS-----LVELTDLRISDLNGPEGPFPRL----SNLK-NMNYLI 193 (809)
Q Consensus 129 ~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~l~~n~l~~~~~~~l----~~l~-~L~~L~ 193 (809)
+..+..+... ++|++|+|++|++++..+..+.. .++|++|++++|.++......+ ..++ +|++|+
T Consensus 94 ~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~ 173 (362)
T 3goz_A 94 YKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLN 173 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEE
T ss_pred hHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEee
Confidence 8877765554 89999999999999776655443 3699999999999987665543 4555 999999
Q ss_pred eccccccCCCChhhhcc-----ccccEEeccCCCCCCCCC----CCCCC--CCccEEEeeCccCCCCCChhhhh-----c
Q 043333 194 LRSGNIIGEMPEYLGQM-----IGLRVLDLSFNKLSGVIP----SNFSG--SGLTYMYLTGNLLTGPVPDWIVR-----K 257 (809)
Q Consensus 194 Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p----~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~-----~ 257 (809)
|++|++++..+..+... ++|+.|||++|+|++... ..+.. ++|+.|+|++|++++..+..+.. .
T Consensus 174 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~ 253 (362)
T 3goz_A 174 LRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLK 253 (362)
T ss_dssp CTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTT
T ss_pred ecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCC
Confidence 99999999988766554 699999999999987432 22222 58999999999999877644432 5
Q ss_pred cCccccccCCccccC
Q 043333 258 RNKHIDLSYNNFIDG 272 (809)
Q Consensus 258 ~l~~L~Ls~N~l~~~ 272 (809)
.++.|+|++|.+...
T Consensus 254 ~L~~L~L~~n~l~~i 268 (362)
T 3goz_A 254 HLQTVYLDYDIVKNM 268 (362)
T ss_dssp TCSEEEEEHHHHTTC
T ss_pred CccEEEeccCCcccc
Confidence 679999999997654
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=6.5e-20 Score=211.88 Aligned_cols=166 Identities=19% Similarity=0.237 Sum_probs=109.8
Q ss_pred ccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEec
Q 043333 67 STLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFI 146 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 146 (809)
++|+.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 45666666666666 455 335666666666666664 454 443 66666666666664 444 4566666666
Q ss_pred ccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccc-------cEEecc
Q 043333 147 EGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGL-------RVLDLS 219 (809)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls 219 (809)
++|+|++ +|. .+++|+.|++++|.++.++. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|+
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls 215 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCR 215 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecC
Confidence 6666664 444 45666667777666666554 43 67777777777776 3343 443 55 999999
Q ss_pred CCCCCCCCCCCCCCCCccEEEeeCccCCCCCChhhhh
Q 043333 220 FNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPDWIVR 256 (809)
Q Consensus 220 ~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 256 (809)
+|+|+.+++..+..++|+.|+|++|+|++.+|..+..
T Consensus 216 ~N~l~~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 216 ENRITHIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp SSCCCCCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred CCcceecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 9999976665666689999999999999988887765
No 350
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=7.7e-20 Score=200.96 Aligned_cols=145 Identities=20% Similarity=0.168 Sum_probs=86.2
Q ss_pred cCcEEeecccccccCCCcccc-CCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEec
Q 043333 68 TLADLTLEFNQFSGDLPAELG-NLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFI 146 (809)
Q Consensus 68 ~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 146 (809)
.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 456666666666655555555 6666666666666666555556666666666666666666555555666666666666
Q ss_pred ccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccc---cCCcCCceeeeccccccCCCChhhhcccc
Q 043333 147 EGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRL---SNLKNMNYLILRSGNIIGEMPEYLGQMIG 212 (809)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 212 (809)
++|+|++..|..|..+++|+.|+|++|.++.++...| ..+++|+.|+|++|++.+..+..|..++.
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~ 188 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPA 188 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCH
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccH
Confidence 6666665555566666666666666666655554444 34555555555555555444444444443
No 351
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2.5e-19 Score=190.74 Aligned_cols=186 Identities=22% Similarity=0.289 Sum_probs=139.2
Q ss_pred ccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccC
Q 043333 50 PLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTG 129 (809)
Q Consensus 50 ~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 129 (809)
.+..+.+..+. .+..+++|+.|++++|.++. ++ .+..+++|++|+|++|++++..+ +.++++|+.|+|++|++++
T Consensus 30 ~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 104 (291)
T 1h6t_A 30 NLKKKSVTDAV-TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD 104 (291)
T ss_dssp HTTCSCTTSEE-CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred HhcCCCccccc-chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC
Confidence 34444443332 23567888888998888884 44 47888888999999888886544 8888888999999888884
Q ss_pred cCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhc
Q 043333 130 QIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQ 209 (809)
Q Consensus 130 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 209 (809)
+| .+..+++|+.|+|++|++++. ..+..+++|+.|++++|.++.+ +.+..+++|+.|+|++|++.+..+ +..
T Consensus 105 -~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~ 176 (291)
T 1h6t_A 105 -LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAG 176 (291)
T ss_dssp -GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred -Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcC
Confidence 33 388888888888888888853 4677888888888888888776 567788888888888888877655 778
Q ss_pred cccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCC
Q 043333 210 MIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGP 249 (809)
Q Consensus 210 l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~ 249 (809)
+++|+.|+|++|+|++.. .....++|+.|+|++|+++..
T Consensus 177 l~~L~~L~L~~N~i~~l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 177 LTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEEEEEEECC
T ss_pred CCccCEEECCCCcCCCCh-hhccCCCCCEEECcCCcccCC
Confidence 888888888888887653 333337788888888877753
No 352
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=2.8e-19 Score=182.16 Aligned_cols=152 Identities=21% Similarity=0.319 Sum_probs=95.7
Q ss_pred cEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccC
Q 043333 70 ADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGS 149 (809)
Q Consensus 70 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 149 (809)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46677777776 4555443 46666666666666555556666666666666666666555666666666666666666
Q ss_pred cCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCC
Q 043333 150 GLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPS 229 (809)
Q Consensus 150 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 229 (809)
+|+ .++...|.++++|++|+|++|++.+..|..|..+++|+.|+|++|+|+++++.
T Consensus 91 ~l~------------------------~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 91 KIT------------------------ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCC------------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCC------------------------ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 555 34434445555566666666666666666666667777777777777766666
Q ss_pred CCCC-CCccEEEeeCccCCC
Q 043333 230 NFSG-SGLTYMYLTGNLLTG 248 (809)
Q Consensus 230 ~~~~-~~L~~L~Ls~N~l~~ 248 (809)
.+.. ++|+.|+|++|++..
T Consensus 147 ~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTCTTCCEEECCSSCEEC
T ss_pred HHhCCCCCCEEEeCCCCcCC
Confidence 5554 667777777777664
No 353
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.5e-19 Score=198.63 Aligned_cols=157 Identities=21% Similarity=0.141 Sum_probs=104.3
Q ss_pred CcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhh-cccccceeeeecccccCcCchhhhcccccceEecc
Q 043333 69 LADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFA-NLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIE 147 (809)
Q Consensus 69 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 147 (809)
-+.+++++|+|+ .+|..+. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 367888888888 5666554 3578888888888877776676 78888888888888887777778888888888888
Q ss_pred cCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhh---hccccccEEeccCCCCC
Q 043333 148 GSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYL---GQMIGLRVLDLSFNKLS 224 (809)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~ 224 (809)
+|+|+...+..|..+++|+.|+|++|.+..+.+..|.++++|+.|+|++|++.+..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 888776656666666666666666666665555555555555555555555555444444 34455555555555555
Q ss_pred CCCC
Q 043333 225 GVIP 228 (809)
Q Consensus 225 ~~~p 228 (809)
++++
T Consensus 177 ~l~~ 180 (361)
T 2xot_A 177 KLPL 180 (361)
T ss_dssp CCCH
T ss_pred ccCH
Confidence 4433
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.3e-19 Score=209.50 Aligned_cols=192 Identities=21% Similarity=0.277 Sum_probs=145.1
Q ss_pred cccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeeccc
Q 043333 47 VNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNH 126 (809)
Q Consensus 47 ~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 126 (809)
..+.+..+.+..++. +..+++|+.|+|++|.++ .++ .+..+++|+.|+|++|+|++..| +.++++|+.|+|++|+
T Consensus 24 ~~l~l~~~~i~~~~~-~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT-QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHHHTTCSCTTSEEC-HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred HHHhccCCCcccccc-hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 344445555544432 466778888888888887 444 57888888888888888886544 8888888888888888
Q ss_pred ccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChh
Q 043333 127 FTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEY 206 (809)
Q Consensus 127 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 206 (809)
|++ +| .+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+..+ ..+..+++|+.|+|++|.+.+..|
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 874 33 578888888888888888853 4577888888888888888876 678888888888888888887766
Q ss_pred hhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccCCCCCCh
Q 043333 207 LGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLLTGPVPD 252 (809)
Q Consensus 207 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~ 252 (809)
+..+++|+.|+|++|+|+++ +....+++|+.|+|++|++++.+..
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCCccc
Confidence 88888888888888888875 4433448888888888888765443
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.2e-19 Score=184.98 Aligned_cols=153 Identities=18% Similarity=0.257 Sum_probs=78.6
Q ss_pred cEEeecccccccCCCccccCCCCCCEEEccCCccCccCc-hhhhcccccceeeeecccccCcCchhhhcccccceEeccc
Q 043333 70 ADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLP-ESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEG 148 (809)
Q Consensus 70 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 148 (809)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|.++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35666666665 3454432 234566666666665433 2355566666666666666655555555555555555555
Q ss_pred CcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCC
Q 043333 149 SGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIP 228 (809)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 228 (809)
|++++..+..|..+++|+.|++++ |++.+..|..|..+++|+.|+|++|+|++.+|
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~------------------------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRS------------------------NRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 146 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTT------------------------SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCT
T ss_pred CccCccCHhHhcCCcCCCEEECCC------------------------CcCCeECHhHcCCCccCCEEECCCCcCCEECH
Confidence 555544444444444444444444 44444444444444444455555555554444
Q ss_pred CCCCC-CCccEEEeeCccCCCC
Q 043333 229 SNFSG-SGLTYMYLTGNLLTGP 249 (809)
Q Consensus 229 ~~~~~-~~L~~L~Ls~N~l~~~ 249 (809)
..+.. ++|+.|+|++|++++.
T Consensus 147 ~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 147 GAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTTTTCTTCCEEECCSCCEECS
T ss_pred HHhcCCCCCCEEEecCcCCcCC
Confidence 44443 4555555555555543
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=3.8e-19 Score=181.20 Aligned_cols=151 Identities=17% Similarity=0.186 Sum_probs=111.9
Q ss_pred eeeeecccccCcCchhhhcccccceEecccCcCCCCCC-ccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccc
Q 043333 119 HFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIP-SGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSG 197 (809)
Q Consensus 119 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N 197 (809)
.+++++|.++ .+|..+. ..++.|+|++|+|++..+ ..|..+++|+.|++++|.++.++...|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4444444444 2333221 233455555555554433 23555566666666666666666666777788888888889
Q ss_pred cccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCccccC
Q 043333 198 NIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNFIDG 272 (809)
Q Consensus 198 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l~~~ 272 (809)
++++..+..|..+++|++|+|++|+|++++|..+.. ++|+.|+|++|+|++..|..+.. .+++.|+|++|+|.|.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 998888899999999999999999999999998887 99999999999999998888765 5679999999999985
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=6.5e-19 Score=179.44 Aligned_cols=153 Identities=17% Similarity=0.212 Sum_probs=125.8
Q ss_pred ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecc
Q 043333 46 LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDN 125 (809)
Q Consensus 46 L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 125 (809)
-..++++++.+..+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 ~~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 13 NNIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TTEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CCEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 4567888999999998775 78999999999999877779999999999999999999988999999999999999999
Q ss_pred cccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeecccccc
Q 043333 126 HFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNII 200 (809)
Q Consensus 126 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 200 (809)
+|+...+..|.++++|+.|+|++|+|++..|..|..+++|+.|++++|.++.++...|..+++|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 999766677899999999999999999877777777777777766666666655555555555555555554443
No 358
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.79 E-value=2.3e-19 Score=174.92 Aligned_cols=117 Identities=23% Similarity=0.345 Sum_probs=97.5
Q ss_pred ccCchhhhcccccCceeeeeeeeeeeCceEEEEEEEEeeEecCCcccccCCceeEEEEecCeeeccccceeeccCCcCce
Q 043333 377 LMDDSQLYTEARISPISLTYYGYCMVNGNYTVNLHFAEILFTDDKSYCSLGRRIFDVYIQGKLVLKDFNIENEAGGVGKA 456 (809)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (809)
.+.+++||+|||..|.+++|+.-|..||+|+|+||||||.+.+ +|+|+|||||||+.+++||||..++|+ .++
T Consensus 50 ~~~~~~lY~TaR~~~~~~tY~f~v~~~G~Y~VrLhF~ei~~~~------~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~ 122 (174)
T 2jwp_A 50 NPEDQVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFAQ------SQQKVFDVRVNGHTVVKDLDIFDRVGH-STA 122 (174)
T ss_dssp CHHHHHTTTCCCCCCSCEEEEEECCSCEEEEEEEEEECCSCCC------SSSSCEEEEETTEEEEEEECHHHHHSS-SSC
T ss_pred CCCCchhhhhhccCCCCeEEEEEeCCCeEEEEEEEEeccccCC------CCCeEeEEEECCEEeecCcCHHHhhCC-Cee
Confidence 4567899999999999999999999999999999999998753 799999999999999999999999987 788
Q ss_pred EEEeeeeeeecCeeEEEEEec-CCCccccC--CCCCcCCcccccccc
Q 043333 457 IVKPFSAAVTNGTMEIRLYWA-GKGTTDIP--YKGVYGPLISAISLY 500 (809)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~w~-g~~~~~~p--~~~~~~p~~~~~~~~ 500 (809)
+.+.+...|.++.++++..|. +.|+..+. ....++|.+.++...
T Consensus 123 ~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~a~inaIEI~ 169 (174)
T 2jwp_A 123 HDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIM 169 (174)
T ss_dssp EEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCSSSEEEEEEE
T ss_pred EEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCCcEEEEEEEE
Confidence 999999999999888887775 45552222 122566777666554
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=4e-19 Score=189.17 Aligned_cols=175 Identities=21% Similarity=0.277 Sum_probs=139.1
Q ss_pred CCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEE
Q 043333 18 TRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLH 97 (809)
Q Consensus 18 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 97 (809)
..+++|++|++++|.+. .++ .+..+++|++|+|++|++++. +. +..+++|++|+
T Consensus 43 ~~l~~L~~L~l~~~~i~-----------------------~~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~ 96 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-----------------------SVQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLF 96 (291)
T ss_dssp HHHHTCCEEECTTSCCC-----------------------CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEE
T ss_pred hhcCcccEEEccCCCcc-----------------------cCh-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEE
Confidence 34566666666666665 333 266678888999999988854 33 88888899999
Q ss_pred ccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCC
Q 043333 98 LNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPE 177 (809)
Q Consensus 98 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~ 177 (809)
|++|++++ +| .+..+++|++|+|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+..
T Consensus 97 l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 97 LDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc
Confidence 99998885 34 488888999999999988853 4588888999999999988864 678888999999999998888
Q ss_pred CCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCC
Q 043333 178 GPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIP 228 (809)
Q Consensus 178 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 228 (809)
++. +..+++|+.|+|++|.+... + .+..+++|+.|+|++|+++..+.
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~~~ 217 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPI 217 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECCCE
T ss_pred chh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCCcc
Confidence 765 88899999999999998875 3 48899999999999999986543
No 360
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=2.9e-18 Score=175.74 Aligned_cols=155 Identities=23% Similarity=0.285 Sum_probs=102.0
Q ss_pred CcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEeccc
Q 043333 69 LADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEG 148 (809)
Q Consensus 69 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 148 (809)
.+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 455667666666 5554443 5666666666666666666666666666666666666644444455556666666655
Q ss_pred CcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCC
Q 043333 149 SGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIP 228 (809)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 228 (809)
|+|++ ++...|..+++|++|+|++|++. .+|..+..+++|+.|+|++|+|+++++
T Consensus 98 N~l~~------------------------l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 98 NQLTV------------------------LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp SCCCC------------------------CCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred CcCCc------------------------cChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCH
Confidence 55554 43344455556666666666666 456667788888888888888888777
Q ss_pred CCCCC-CCccEEEeeCccCCCCCC
Q 043333 229 SNFSG-SGLTYMYLTGNLLTGPVP 251 (809)
Q Consensus 229 ~~~~~-~~L~~L~Ls~N~l~~~~p 251 (809)
..+.. ++|+.|+|++|++++..+
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTTBG
T ss_pred HHHhCCCCCCEEEeeCCCccCCcc
Confidence 76665 888888888888887654
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=7.1e-19 Score=205.32 Aligned_cols=193 Identities=20% Similarity=0.265 Sum_probs=146.1
Q ss_pred CCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCC
Q 043333 23 LQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSN 101 (809)
Q Consensus 23 L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 101 (809)
+..+.|+.+.+....+ +..++ |+.|++++|.+..+| .+..+++|+.|+|++|+|++..+ +..+++|+.|+|++|
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCC
Confidence 3344455555443222 12222 555666666666665 47778888999999998885443 888888999999999
Q ss_pred ccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCc
Q 043333 102 NFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFP 181 (809)
Q Consensus 102 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 181 (809)
+|++ +| .+..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+..+.+
T Consensus 98 ~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 98 KIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp CCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 8885 34 68888889999999998885 3 3588888999999999988864 678888899999999998887765
Q ss_pred cccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCC
Q 043333 182 RLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSN 230 (809)
Q Consensus 182 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 230 (809)
+..+++|+.|+|++|++.+. ..+..+++|+.|+|++|++++.+...
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~ 216 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINH 216 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCC
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccc
Confidence 88889999999999988875 46888999999999999998765543
No 362
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.3e-18 Score=173.87 Aligned_cols=153 Identities=19% Similarity=0.192 Sum_probs=102.0
Q ss_pred cCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccce
Q 043333 64 ASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEK 143 (809)
Q Consensus 64 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 143 (809)
..+++|+.|+|++|.++ .+| .+..+++|++|+|++|.++ .+ ..+..+++|++|+|++|++++..+..++.+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 56677888888888887 555 5777788888888888666 33 36777778888888888877666777777777777
Q ss_pred EecccCcCCCCCCccccCCCCCCEEeccCCC-CCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCC
Q 043333 144 LFIEGSGLAGPIPSGIASLVELTDLRISDLN-GPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNK 222 (809)
Q Consensus 144 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 222 (809)
|+|++|++++..|..+..+++|+.|++++|. ++.++ .+..+++|+.|+|++|.+.+.. .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM--PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG--GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH--hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 7777777776666667777777777776665 55543 4555555555555555555432 45555555555555555
Q ss_pred CC
Q 043333 223 LS 224 (809)
Q Consensus 223 l~ 224 (809)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 43
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=3.3e-18 Score=175.40 Aligned_cols=153 Identities=22% Similarity=0.271 Sum_probs=120.9
Q ss_pred ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecc
Q 043333 46 LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDN 125 (809)
Q Consensus 46 L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 125 (809)
...++.+++.++.+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|+|+...+..|.++++|+.|+|++|
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 4456666666677776554 89999999999999888999999999999999999999776777899999999999999
Q ss_pred cccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccC
Q 043333 126 HFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIG 201 (809)
Q Consensus 126 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 201 (809)
+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|++..++...|..+++|+.|+|++|.+..
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 999877778899999999999999999 778777777777777766666665555445555444444444444443
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.6e-18 Score=181.58 Aligned_cols=171 Identities=22% Similarity=0.288 Sum_probs=109.8
Q ss_pred CccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEe
Q 043333 66 ISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLF 145 (809)
Q Consensus 66 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 145 (809)
+.++..+++++|.+++ ++ .+..+++|++|++++|+++ .+| .+..+++|+.|+|++|+|++..+ +.++++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 3445555666666652 22 3555666666666666666 334 45566666666666666664333 66666666666
Q ss_pred cccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCC
Q 043333 146 IEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSG 225 (809)
Q Consensus 146 L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 225 (809)
|++|++++ +|.. .. ++|+.|++++|.++.+ +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++
T Consensus 92 L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCcc-cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCCcCcc
Confidence 66666663 2222 22 6667777777766664 3477777888888888887775 267888888888888888887
Q ss_pred CCCCCCCCCCccEEEeeCccCCCCC
Q 043333 226 VIPSNFSGSGLTYMYLTGNLLTGPV 250 (809)
Q Consensus 226 ~~p~~~~~~~L~~L~Ls~N~l~~~~ 250 (809)
. +.....++|+.|+|++|++++.+
T Consensus 165 ~-~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 165 T-GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp C-TTSTTCCCCCEEEEEEEEEECCC
T ss_pred h-HHhccCCCCCEEeCCCCcccCCc
Confidence 7 33333388888888888888664
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=4.6e-20 Score=214.07 Aligned_cols=181 Identities=17% Similarity=0.164 Sum_probs=112.4
Q ss_pred CCccCcEEeecccccccCCCccccCCCCCCEEEccCCc-------------cCccCchhhhcccccceee-eecccccCc
Q 043333 65 SISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNN-------------FTGKLPESFANLTRLKHFR-ISDNHFTGQ 130 (809)
Q Consensus 65 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~~ 130 (809)
.+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+. .
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-~ 424 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-D 424 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-H
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-h
Confidence 3455555555555555 455555555555555554443 4445566666666666666 4555433 1
Q ss_pred Cch------hhhcc--cccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCC
Q 043333 131 IPD------YIQNW--TKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGE 202 (809)
Q Consensus 131 ~p~------~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 202 (809)
++. .+..+ ..|+.|+|++|+|++ +|. |..+++|+.|++++|.++.++ ..+.++++|+.|+|++|++++
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp-~~~~~l~~L~~L~Ls~N~l~~- 500 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALP-PALAALRCLEVLQASDNALEN- 500 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCC-GGGGGCTTCCEEECCSSCCCC-
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccc-hhhhcCCCCCEEECCCCCCCC-
Confidence 111 11111 246777777777774 554 777777777777777777554 367777777777777777776
Q ss_pred CChhhhccccccEEeccCCCCCCCC-CCCCCC-CCccEEEeeCccCCCCCCh
Q 043333 203 MPEYLGQMIGLRVLDLSFNKLSGVI-PSNFSG-SGLTYMYLTGNLLTGPVPD 252 (809)
Q Consensus 203 ~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~-~~L~~L~Ls~N~l~~~~p~ 252 (809)
+| .|..+++|+.|+|++|+|++.+ |..+.. ++|+.|+|++|+|++.+|.
T Consensus 501 lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 45 6777777777777777777775 555554 7777777777777766553
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.4e-18 Score=180.33 Aligned_cols=169 Identities=20% Similarity=0.262 Sum_probs=142.0
Q ss_pred ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecc
Q 043333 46 LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDN 125 (809)
Q Consensus 46 L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 125 (809)
+..+.+.++.+..++ .+..+++|+.|++++|+++ .++ .+..+++|++|+|++|+|++..+ +.++++|+.|+|++|
T Consensus 21 l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N 95 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRN 95 (263)
T ss_dssp HHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSS
T ss_pred HHHHHhcCCCccccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCC
Confidence 667788888888888 6788899999999999998 555 68889999999999999996544 889999999999999
Q ss_pred cccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCCh
Q 043333 126 HFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPE 205 (809)
Q Consensus 126 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 205 (809)
++++ +|.. .. ++|+.|+|++|++++. ..+..+++|+.|++++|+++.++ .+..+++|+.|+|++|++.+. .
T Consensus 96 ~l~~-l~~~-~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i~~~--~ 166 (263)
T 1xeu_A 96 RLKN-LNGI-PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEITNT--G 166 (263)
T ss_dssp CCSC-CTTC-CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCCCBC--T
T ss_pred ccCC-cCcc-cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcCcch--H
Confidence 9985 4432 23 8999999999999863 35888999999999999998874 688899999999999999887 6
Q ss_pred hhhccccccEEeccCCCCCCCCC
Q 043333 206 YLGQMIGLRVLDLSFNKLSGVIP 228 (809)
Q Consensus 206 ~~~~l~~L~~L~Ls~N~l~~~~p 228 (809)
.+..+++|+.|+|++|+++..+.
T Consensus 167 ~l~~l~~L~~L~l~~N~~~~~~~ 189 (263)
T 1xeu_A 167 GLTRLKKVNWIDLTGQKCVNEPV 189 (263)
T ss_dssp TSTTCCCCCEEEEEEEEEECCCE
T ss_pred HhccCCCCCEEeCCCCcccCCcc
Confidence 78889999999999999987643
No 367
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=9.9e-19 Score=209.07 Aligned_cols=166 Identities=15% Similarity=0.160 Sum_probs=118.0
Q ss_pred CcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEeccc
Q 043333 69 LADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEG 148 (809)
Q Consensus 69 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 148 (809)
+..++++.|.+. ..+..|..+++|+.|+|++|++. .+|..+.++++|++|+|++|.|+ .+|..|+++++|+.|+|++
T Consensus 203 i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 279 (727)
T 4b8c_D 203 IDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSH 279 (727)
T ss_dssp --------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTT
T ss_pred ccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcC
Confidence 344455666666 66778888889999999999988 67777778889999999999988 7888888899999999999
Q ss_pred CcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhcccc-ccEEeccCCCCCCCC
Q 043333 149 SGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIG-LRVLDLSFNKLSGVI 227 (809)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~ 227 (809)
|+|+ .+|..|..+++|+.|+|++|.++.++.. |.++++|+.|+|++|.+.+.+|..+..+.. +..|+|++|.+++.+
T Consensus 280 N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~ 357 (727)
T 4b8c_D 280 NRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWE-FGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPL 357 (727)
T ss_dssp SCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSS-TTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CcCC-ccChhhcCCCCCCEEECCCCCCCccChh-hhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcC
Confidence 9988 7788888999999999999988877654 889999999999999999999988876533 345889999999888
Q ss_pred CCCCCCCCccEEEeeCc
Q 043333 228 PSNFSGSGLTYMYLTGN 244 (809)
Q Consensus 228 p~~~~~~~L~~L~Ls~N 244 (809)
|. .|+.|+++.|
T Consensus 358 p~-----~l~~l~l~~n 369 (727)
T 4b8c_D 358 PH-----ERRFIEINTD 369 (727)
T ss_dssp CC-----C---------
T ss_pred cc-----ccceeEeecc
Confidence 76 4667777777
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=7.8e-19 Score=209.98 Aligned_cols=191 Identities=17% Similarity=0.167 Sum_probs=125.7
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCC-----ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCE
Q 043333 21 PFLQEIDLTRNYLNGTIPSEWASLP-----LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEK 95 (809)
Q Consensus 21 ~~L~~L~Ls~n~l~~~~p~~~~~l~-----L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 95 (809)
+.++.|+|++|.+.......+..+. +..+++..|.+...|..+..+++|+.|+|++|.+. .+|..+.++++|++
T Consensus 173 ~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~ 251 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTR 251 (727)
T ss_dssp -------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSC
T ss_pred CccceEEeeCCCCCcchhhHhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCE
Confidence 5688889999988864444444333 33444555666766888999999999999999999 78888889999999
Q ss_pred EEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCC
Q 043333 96 LHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNG 175 (809)
Q Consensus 96 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l 175 (809)
|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..|+++++|++|+|++|.|+ .+|..|..+++|+.|+|++|.+
T Consensus 252 L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 252 LYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp CBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCC
T ss_pred EEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCcc
Confidence 999999999 88999999999999999999999 78999999999999999999998 7888899999999999999999
Q ss_pred CCCCCccccCCcC-CceeeeccccccCCCChhhhccccccEEeccCC
Q 043333 176 PEGPFPRLSNLKN-MNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFN 221 (809)
Q Consensus 176 ~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 221 (809)
+...+..+..+.. +..|+|++|.+++.+|. .|+.|+++.|
T Consensus 329 ~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 329 EKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------
T ss_pred CCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecc
Confidence 9877777655432 34588999999999985 4566778777
No 369
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=1.7e-18 Score=180.94 Aligned_cols=137 Identities=19% Similarity=0.149 Sum_probs=105.2
Q ss_pred CCCCCCeeccCCCccEEEeEe-eCCeE--EEEEEecccCcc------------------------cchhHHHHHHHHhhc
Q 043333 576 NFAPDNKIGEGGFGPVYKGLL-ADGKV--IAVKQLSSKSKQ------------------------GNREFVNEIGMISAL 628 (809)
Q Consensus 576 ~f~~~~~LG~G~fG~Vy~~~~-~~g~~--vAVK~~~~~~~~------------------------~~~~f~~Ei~~l~~l 628 (809)
-|+..+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999997 68998 999987543111 012578899999999
Q ss_pred CCCce--EeEEeEEEeCCeEEEEEEcccC-C----chhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeE
Q 043333 629 QHPNL--VKLYGCCIEGNQLLLIYEYMEN-N----SLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLH-EESRLKIV 700 (809)
Q Consensus 629 ~H~nI--v~l~~~~~~~~~~~lV~ey~~~-g----sL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ii 700 (809)
+|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---giv 193 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELV 193 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEE
Confidence 88864 334432 356899999953 4 55554421 123456789999999999999 77 899
Q ss_pred EcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 701 HRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 701 H~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
||||||+|||+++ .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999754
No 370
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.73 E-value=2.7e-19 Score=209.76 Aligned_cols=272 Identities=14% Similarity=0.056 Sum_probs=195.2
Q ss_pred CccccCCCCC----ccCCccCCCCCCCCEEEccCCCCCC--------------------------CCCcccCCCC-cccc
Q 043333 1 HRILKSQNLP----GRLPPELTRLPFLQEIDLTRNYLNG--------------------------TIPSEWASLP-LVNL 49 (809)
Q Consensus 1 ~L~L~~nnl~----~~lp~~l~~l~~L~~L~Ls~n~l~~--------------------------~~p~~~~~l~-L~~L 49 (809)
+|+|++|.+. +.++..+..+++|++|+|++|.+.+ ..+..+..++ |+.+
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L 275 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRL 275 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhcccccccc
Confidence 3667777776 3444445667777888877776543 1112222232 5666
Q ss_pred ccccccCCCCchhhcCCccCcEEeecccccccCCC-ccccCCCCCCEEEccCCccC-ccCchhhhcccccceeeeec---
Q 043333 50 PLWKQANGAIPKAVASISTLADLTLEFNQFSGDLP-AELGNLINLEKLHLNSNNFT-GKLPESFANLTRLKHFRISD--- 124 (809)
Q Consensus 50 ~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~--- 124 (809)
.++++....+|..+..+++|++|+|++|.+++... ..+..+++|++|+|+ |.+. +.++..+..+++|++|+|++
T Consensus 276 ~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~ 354 (592)
T 3ogk_B 276 GLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGAD 354 (592)
T ss_dssp EETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCC
T ss_pred CccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCcc
Confidence 66666667788888889999999999999775433 346889999999999 4444 34444557789999999993
Q ss_pred --------ccccCcC-chhhhcccccceEecccCcCCCCCCccccC-CCCCCEEecc----CCCCCCCCCc-----cccC
Q 043333 125 --------NHFTGQI-PDYIQNWTKLEKLFIEGSGLAGPIPSGIAS-LVELTDLRIS----DLNGPEGPFP-----RLSN 185 (809)
Q Consensus 125 --------N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~l~----~n~l~~~~~~-----~l~~ 185 (809)
|.+++.. +..+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|.++..+.. .+.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~ 434 (592)
T 3ogk_B 355 EQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIG 434 (592)
T ss_dssp SSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHH
T ss_pred ccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHh
Confidence 6666432 233566899999999999998776666665 8999999996 6677765433 2677
Q ss_pred CcCCceeeecccc--ccCCCChhhhc-cccccEEeccCCCCCCCC-CCCCCC-CCccEEEeeCccCCCCCChhh--hhcc
Q 043333 186 LKNMNYLILRSGN--IIGEMPEYLGQ-MIGLRVLDLSFNKLSGVI-PSNFSG-SGLTYMYLTGNLLTGPVPDWI--VRKR 258 (809)
Q Consensus 186 l~~L~~L~Ls~N~--l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~-p~~~~~-~~L~~L~Ls~N~l~~~~p~~~--~~~~ 258 (809)
+++|+.|+|+.|. +++..+..+.. +++|+.|+|++|++++.. +..+.. ++|+.|+|++|++++.....+ ...+
T Consensus 435 ~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~ 514 (592)
T 3ogk_B 435 CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPS 514 (592)
T ss_dssp CTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSS
T ss_pred CCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCc
Confidence 9999999998543 66666666554 899999999999998632 333333 899999999999876533333 2367
Q ss_pred CccccccCCccccCC
Q 043333 259 NKHIDLSYNNFIDGS 273 (809)
Q Consensus 259 l~~L~Ls~N~l~~~~ 273 (809)
++.|+|++|+++...
T Consensus 515 L~~L~ls~n~it~~~ 529 (592)
T 3ogk_B 515 LRYLWVQGYRASMTG 529 (592)
T ss_dssp CCEEEEESCBCCTTC
T ss_pred cCeeECcCCcCCHHH
Confidence 899999999987653
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=1.3e-19 Score=210.30 Aligned_cols=180 Identities=17% Similarity=0.134 Sum_probs=96.1
Q ss_pred cCCCCCCEEEccCCccCccCchhhhcccccceeeeeccc-------------ccCcCchhhhcccccceEe-cccCcCCC
Q 043333 88 GNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNH-------------FTGQIPDYIQNWTKLEKLF-IEGSGLAG 153 (809)
Q Consensus 88 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 153 (809)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 34556666666666665 556666666666666665553 3445555555555555555 34333220
Q ss_pred CCCc------cccC--CCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCC
Q 043333 154 PIPS------GIAS--LVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSG 225 (809)
Q Consensus 154 ~~p~------~~~~--l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 225 (809)
++. .+.. ...|+.|++++|.++.++. +.++++|+.|+|++|+++ .+|..|+.+++|+.|+|++|+|++
T Consensus 425 -L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 425 -LRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN 500 (567)
T ss_dssp -HHHHHHHHHHHHHHHHTTCSEEECTTSCCSSCCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred -hhhhhhhcccccccCccCceEEEecCCCCCCCcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC
Confidence 000 0000 1135566666666665442 566666666666666665 455566666666666666666665
Q ss_pred CCCCCCCCCCccEEEeeCccCCCCC-Chhhhh-ccCccccccCCccccCC
Q 043333 226 VIPSNFSGSGLTYMYLTGNLLTGPV-PDWIVR-KRNKHIDLSYNNFIDGS 273 (809)
Q Consensus 226 ~~p~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~-~~l~~L~Ls~N~l~~~~ 273 (809)
+ |.....++|+.|+|++|+|++.+ |..+.. .+++.|+|++|++++.+
T Consensus 501 l-p~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 501 V-DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp C-GGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred C-cccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 3 32222266666666666666554 444433 44566666666665543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=1.5e-17 Score=166.13 Aligned_cols=146 Identities=21% Similarity=0.229 Sum_probs=108.2
Q ss_pred cccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeeccccc
Q 043333 49 LPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFT 128 (809)
Q Consensus 49 L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 128 (809)
|++++|.+..+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..|..++.+++|++|+|++|+++
T Consensus 49 L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~ 125 (197)
T 4ezg_A 49 ITLANINVTDLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHD 125 (197)
T ss_dssp EEEESSCCSCCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCB
T ss_pred EeccCCCccChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccC
Confidence 333333333444 4666778888888888665 3346778888888888888888767777888888888888888888
Q ss_pred CcCchhhhcccccceEecccCc-CCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccC
Q 043333 129 GQIPDYIQNWTKLEKLFIEGSG-LAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIG 201 (809)
Q Consensus 129 ~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 201 (809)
+..|..+..+++|++|+|++|+ ++ .+| .+..+++|+.|++++|.+..++ .+..+++|+.|++++|++.+
T Consensus 126 ~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 126 DSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp GGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC----
T ss_pred cHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcccCC
Confidence 7777788888888888888887 55 455 6788888888888888887765 67888888888888888754
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=7.5e-18 Score=167.71 Aligned_cols=129 Identities=18% Similarity=0.268 Sum_probs=72.2
Q ss_pred cEEeecccccccCCCccccCCCCCCEEEccCCccCccCch-hhhcccccceeeeecccccCcCchhhhcccccceEeccc
Q 043333 70 ADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPE-SFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEG 148 (809)
Q Consensus 70 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 148 (809)
+.|++++|+++ .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56667777665 55554432 666666666666654443 356666666666666666655565566666666666666
Q ss_pred CcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCC
Q 043333 149 SGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSG 225 (809)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 225 (809)
|+|++..+..|. ++++|++|+|++|++++..|..|..+++|+.|+|++|.+++
T Consensus 88 N~l~~~~~~~~~------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFL------------------------GLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSST------------------------TCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhc------------------------CCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 655544444343 34444444444455555555555555555555555555543
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=7.6e-17 Score=160.43 Aligned_cols=140 Identities=16% Similarity=0.114 Sum_probs=96.3
Q ss_pred ccceEecccCcCCCCCCc-cccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEec
Q 043333 140 KLEKLFIEGSGLAGPIPS-GIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDL 218 (809)
Q Consensus 140 ~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 218 (809)
+|++|+|++|+|++..+. .|..+++|+.|++++|.++.+.+..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 444444444444433332 2445555555555555555555555666777777888888888888889999999999999
Q ss_pred cCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhhccCccccccCCccccCCCCCccc
Q 043333 219 SFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNNFIDGSSDSNCE 279 (809)
Q Consensus 219 s~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~l~~~~~~~~~~ 279 (809)
++|+|++.+|..+.. ++|+.|+|++|++++..+...-...++...+..+...|..|..+.+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l~~ 171 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRD 171 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTTTT
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChHHcC
Confidence 999999999998877 9999999999999987664322222333355666777766655544
No 375
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.67 E-value=1.5e-18 Score=203.45 Aligned_cols=224 Identities=14% Similarity=0.066 Sum_probs=122.0
Q ss_pred ccccccccccCCCCchhhcCCccCcEEeecccccc---cCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeee
Q 043333 46 LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFS---GDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRI 122 (809)
Q Consensus 46 L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 122 (809)
|+.|++.++.+..+|..+..+++|+.|+++++... +..+..+..+++|+.|+++++... .+|..+..+++|++|+|
T Consensus 222 L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~L 300 (592)
T 3ogk_B 222 LVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDL 300 (592)
T ss_dssp CCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEE
T ss_pred CcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEec
Confidence 44455544444444444444455555555432211 122233444555555555554322 55666677777777777
Q ss_pred ecccccCcCc-hhhhcccccceEecccCcCC-CCCCccccCCCCCCEEeccC-----------CCCCCCCCcc-ccCCcC
Q 043333 123 SDNHFTGQIP-DYIQNWTKLEKLFIEGSGLA-GPIPSGIASLVELTDLRISD-----------LNGPEGPFPR-LSNLKN 188 (809)
Q Consensus 123 s~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~-----------n~l~~~~~~~-l~~l~~ 188 (809)
++|.+++... ..+..+++|+.|+|+ |.+. +.++..+..+++|+.|++++ |.++...... ...+++
T Consensus 301 s~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 379 (592)
T 3ogk_B 301 LYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQE 379 (592)
T ss_dssp TTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTT
T ss_pred CCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCcc
Confidence 7777654333 335667777777777 3333 22233335567777777773 3443332222 344677
Q ss_pred CceeeeccccccCCCChhhhc-cccccEEecc----CCCCCCCCCC-----CCC-CCCccEEEeeCc--cCCCCCChhhh
Q 043333 189 MNYLILRSGNIIGEMPEYLGQ-MIGLRVLDLS----FNKLSGVIPS-----NFS-GSGLTYMYLTGN--LLTGPVPDWIV 255 (809)
Q Consensus 189 L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~~p~-----~~~-~~~L~~L~Ls~N--~l~~~~p~~~~ 255 (809)
|++|+|+.|++++..+..+.. +++|+.|+|+ .|++++.+.+ .+. .++|+.|+|+.| .+++..+..+.
T Consensus 380 L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~ 459 (592)
T 3ogk_B 380 LEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIG 459 (592)
T ss_dssp CSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHH
T ss_pred CeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHH
Confidence 777777777777666666654 7777777775 5666654221 122 366777777632 35544443332
Q ss_pred h--ccCccccccCCcccc
Q 043333 256 R--KRNKHIDLSYNNFID 271 (809)
Q Consensus 256 ~--~~l~~L~Ls~N~l~~ 271 (809)
. ..++.|+|++|++++
T Consensus 460 ~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 460 QYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HSCTTCCEEEECSCCSSH
T ss_pred HhCccceEeeccCCCCCH
Confidence 2 446667777666653
No 376
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.9e-16 Score=153.79 Aligned_cols=135 Identities=17% Similarity=0.131 Sum_probs=72.7
Q ss_pred CCCEEEccCCccC-ccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEec
Q 043333 92 NLEKLHLNSNNFT-GKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRI 170 (809)
Q Consensus 92 ~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 170 (809)
+|++|+|++|+++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|+.|++
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3444444444444 33343444444444444444444432 33444444444444444444334444444444444444
Q ss_pred cCCCCCCCCC-ccccCCcCCceeeeccccccCCCC---hhhhccccccEEeccCCCCCCCCC
Q 043333 171 SDLNGPEGPF-PRLSNLKNMNYLILRSGNIIGEMP---EYLGQMIGLRVLDLSFNKLSGVIP 228 (809)
Q Consensus 171 ~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p 228 (809)
++|.++.++. ..+..+++|+.|+|++|.+++..+ ..+..+++|+.|++++|.+...+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 4444444432 456666777777777777776666 567788888888888888765543
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=3.2e-16 Score=169.77 Aligned_cols=227 Identities=18% Similarity=0.136 Sum_probs=126.4
Q ss_pred CCCCCEEEccCCCCC--CCCCcccCCCCccccccccccCCCCch-hhcC--------CccCcEEeecccccccCCCcccc
Q 043333 20 LPFLQEIDLTRNYLN--GTIPSEWASLPLVNLPLWKQANGAIPK-AVAS--------ISTLADLTLEFNQFSGDLPAELG 88 (809)
Q Consensus 20 l~~L~~L~Ls~n~l~--~~~p~~~~~l~L~~L~l~~n~~~~ip~-~l~~--------l~~L~~L~L~~N~l~~~~p~~~~ 88 (809)
+++|++|||++|++. ......+.. +..+.+..+ .||. +|.+ +++|+.|+|.+ .++.+-+.+|.
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~--~~~~~~~~~---~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~ 121 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPN--GKFYIYMAN---FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFK 121 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGG--GCCEEECTT---EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTT
T ss_pred hccCeEEecCcceeEEecCccccccc--ccccccccc---ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhh
Confidence 678888999888887 222222221 111222222 5554 5666 88888888888 77766667888
Q ss_pred CCCCCCEEEccCCccCccCchhhhcccccceeeeecccc----cCcCchhhhcccccc----------------------
Q 043333 89 NLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHF----TGQIPDYIQNWTKLE---------------------- 142 (809)
Q Consensus 89 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----~~~~p~~~~~l~~L~---------------------- 142 (809)
++++|+.|+|++|.++.+.+..|.++.++..+.+..+.. .......|.++.+|+
T Consensus 122 ~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~ 201 (329)
T 3sb4_A 122 GCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQP 201 (329)
T ss_dssp TCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCG
T ss_pred cCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCc
Confidence 888888888888888767777787777777666655321 111112222222222
Q ss_pred ----eEecccCcCCCCCCccc-cCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhcccccc-EE
Q 043333 143 ----KLFIEGSGLAGPIPSGI-ASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLR-VL 216 (809)
Q Consensus 143 ----~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L 216 (809)
.+.+.++-.. .....+ ..+++|+.|++++|+++.++...|.++++|+.|+|.+| +..+.+.+|.++++|+ .|
T Consensus 202 ~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 202 RDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 1111111000 000000 12455666666665666666666666666666666555 5555555566666665 66
Q ss_pred eccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhh
Q 043333 217 DLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIV 255 (809)
Q Consensus 217 ~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~ 255 (809)
+|.+ .++.+.+..|.. ++|+.|++++|.++.+.+..|.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~ 318 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFG 318 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTC
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhc
Confidence 6655 555555555555 5666666666666555554443
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=4.5e-16 Score=151.08 Aligned_cols=135 Identities=18% Similarity=0.205 Sum_probs=107.8
Q ss_pred CccCcEEeecccccc-cCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceE
Q 043333 66 ISTLADLTLEFNQFS-GDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKL 144 (809)
Q Consensus 66 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 144 (809)
.++|+.|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888888888887 67777778888888888888888855 677888888888888888887777777778888888
Q ss_pred ecccCcCCCCC-CccccCCCCCCEEeccCCCCCCCCC---ccccCCcCCceeeeccccccCC
Q 043333 145 FIEGSGLAGPI-PSGIASLVELTDLRISDLNGPEGPF---PRLSNLKNMNYLILRSGNIIGE 202 (809)
Q Consensus 145 ~L~~N~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~~---~~l~~l~~L~~L~Ls~N~l~~~ 202 (809)
+|++|++++.. +..+..+++|+.|++++|.+...+. ..+..+++|++|++++|.+...
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 88888887542 2677888888888888888887776 5678888888888888877654
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=2.4e-15 Score=149.59 Aligned_cols=125 Identities=19% Similarity=0.243 Sum_probs=70.9
Q ss_pred cEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccC
Q 043333 70 ADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGS 149 (809)
Q Consensus 70 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 149 (809)
+.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666666666 4554432 46666666666666 55566666666666666666666555556666666666666666
Q ss_pred cCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeecccc
Q 043333 150 GLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGN 198 (809)
Q Consensus 150 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~ 198 (809)
+|++..|..|..+++|+.|++++|.++.++...|..+++|+.|+|++|.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 137 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 137 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCC
Confidence 6665555555555555555544444444443333333333333333333
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=5.7e-16 Score=147.15 Aligned_cols=129 Identities=20% Similarity=0.238 Sum_probs=95.7
Q ss_pred CccCcEEeecccccc-cCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceE
Q 043333 66 ISTLADLTLEFNQFS-GDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKL 144 (809)
Q Consensus 66 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 144 (809)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|++++. ..++++++|++|+|++|++++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 67787888888888888888888865 677888888888888888887677777778888888
Q ss_pred ecccCcCCCC-CCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCC---hhhhccccccEEeccC
Q 043333 145 FIEGSGLAGP-IPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMP---EYLGQMIGLRVLDLSF 220 (809)
Q Consensus 145 ~L~~N~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 220 (809)
+|++|++++. .+..+ ..+++|++|++++|.+++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~------------------------~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPL------------------------KKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGG------------------------GGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHH------------------------hhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888887742 12334 445555666666666666655 5677777777777763
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=5.8e-16 Score=147.11 Aligned_cols=127 Identities=20% Similarity=0.206 Sum_probs=81.1
Q ss_pred CCCCEEEccCCccC-ccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEe
Q 043333 91 INLEKLHLNSNNFT-GKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLR 169 (809)
Q Consensus 91 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 169 (809)
++|+.|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|+++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~----------------- 77 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVS----------------- 77 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCC-----------------
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCccc-----------------
Confidence 44555555555555 44454555555555555555555533 33444455555555555544
Q ss_pred ccCCCCCCCCCccccCCcCCceeeeccccccCC-CChhhhccccccEEeccCCCCCCCCC---CCCCC-CCccEEEeeC
Q 043333 170 ISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGE-MPEYLGQMIGLRVLDLSFNKLSGVIP---SNFSG-SGLTYMYLTG 243 (809)
Q Consensus 170 l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~-~~L~~L~Ls~ 243 (809)
...+..+..+++|++|+|++|++++. .+..+..+++|+.|++++|++++.++ ..+.. ++|+.|++++
T Consensus 78 -------~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 78 -------GGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp -------SCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred -------chHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 43333445566777777777777764 35789999999999999999998877 44544 9999999874
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=3.2e-15 Score=148.76 Aligned_cols=108 Identities=22% Similarity=0.298 Sum_probs=68.7
Q ss_pred ccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEecc
Q 043333 140 KLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLS 219 (809)
Q Consensus 140 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 219 (809)
+|+.|+|++|+|+ .+|..|..+++|+.|++++|.++.++...|.++++|++|+|++|++++..|..|..+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3444444444444 334444444444555555555555555555666666666666777777777777777778888888
Q ss_pred CCCCCCCCCCCCCC-CCccEEEeeCccCCC
Q 043333 220 FNKLSGVIPSNFSG-SGLTYMYLTGNLLTG 248 (809)
Q Consensus 220 ~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~ 248 (809)
+|+|+.+++..|.. ++|+.|+|++|++.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 88887777766665 778888888888775
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=4.9e-15 Score=145.08 Aligned_cols=91 Identities=22% Similarity=0.271 Sum_probs=54.5
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEE
Q 043333 161 SLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYM 239 (809)
Q Consensus 161 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L 239 (809)
.+++|+.|++++|.++.++...|.++++|++|+|++|++++..+..|..+++|+.|+|++|+|+++++..+.. ++|+.|
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 129 (177)
T 2o6r_A 50 KLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKI 129 (177)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEE
Confidence 3333333333333333333333444555555555555555555555666777777777777777777666554 778888
Q ss_pred EeeCccCCCCCC
Q 043333 240 YLTGNLLTGPVP 251 (809)
Q Consensus 240 ~Ls~N~l~~~~p 251 (809)
+|++|++++..|
T Consensus 130 ~l~~N~~~~~~~ 141 (177)
T 2o6r_A 130 WLHTNPWDCSCP 141 (177)
T ss_dssp ECCSSCBCCCHH
T ss_pred EecCCCeeccCc
Confidence 888888877665
No 384
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=1.1e-14 Score=161.46 Aligned_cols=232 Identities=10% Similarity=0.059 Sum_probs=158.7
Q ss_pred CCccCCCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCc-hhhcCCccCcEEeecccccccCCCccccCCC
Q 043333 13 LPPELTRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIP-KAVASISTLADLTLEFNQFSGDLPAELGNLI 91 (809)
Q Consensus 13 lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 91 (809)
-..+|.+. +|+.++|.++ ++......|....|+.+.+.+ .+..|+ .+|.++++|+.++|++|+++......|. ..
T Consensus 128 ~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~ 203 (401)
T 4fdw_A 128 PKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YA 203 (401)
T ss_dssp CTTTTTTC-CCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TC
T ss_pred hHhhcccC-CccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ec
Confidence 34456654 6888887766 665666667776677777765 555664 4677777888888877777744444555 47
Q ss_pred CCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEecc
Q 043333 92 NLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRIS 171 (809)
Q Consensus 92 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 171 (809)
+|+.+.|.++ ++.+...+|.++++|+.++|.+| ++.....+|.+ .+|+.+.| .|.++.....+|.++++|+.+.+.
T Consensus 204 ~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~ 279 (401)
T 4fdw_A 204 GIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTY 279 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEE
T ss_pred ccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeC
Confidence 7888887744 66566667777778888887765 45455556666 67777777 455665556677777788888777
Q ss_pred CCCCC-----CCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCCCCccEEEeeCccC
Q 043333 172 DLNGP-----EGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSGSGLTYMYLTGNLL 246 (809)
Q Consensus 172 ~n~l~-----~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l 246 (809)
+|.+. .++...|.++++|+.+.|. +++..+...+|.++++|+.|+|..| ++.+....|...+|+.|++++|.+
T Consensus 280 ~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 280 GSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp SSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSC
T ss_pred CccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCC
Confidence 76655 4666677777777777777 4566666777777777777777544 666666777666777777777776
Q ss_pred CCCCChhh
Q 043333 247 TGPVPDWI 254 (809)
Q Consensus 247 ~~~~p~~~ 254 (809)
....+..+
T Consensus 358 ~~l~~~~F 365 (401)
T 4fdw_A 358 PQVFEKVW 365 (401)
T ss_dssp CBCCCSSC
T ss_pred cccccccc
Confidence 65444444
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=5.8e-15 Score=144.57 Aligned_cols=132 Identities=17% Similarity=0.225 Sum_probs=70.3
Q ss_pred CcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEeccc
Q 043333 69 LADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEG 148 (809)
Q Consensus 69 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 148 (809)
.+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 355666666665 3443322 4566666666666654444555666666666666666644444455555555555555
Q ss_pred CcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCC
Q 043333 149 SGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVI 227 (809)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 227 (809)
|++++..+..|..+++ |++|+|++|++++..+..|..+++|+.|+|++|.+++..
T Consensus 86 N~l~~~~~~~~~~l~~------------------------L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQ------------------------LKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTT------------------------CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcc------------------------cCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 5555444444444444 444444444444444444455555555555555555443
No 386
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=3.8e-16 Score=169.79 Aligned_cols=138 Identities=15% Similarity=0.181 Sum_probs=99.0
Q ss_pred cCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCc-----ccc---------hh--------HHHHHHHHhhcCCCc
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSK-----QGN---------RE--------FVNEIGMISALQHPN 632 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~-----~~~---------~~--------f~~Ei~~l~~l~H~n 632 (809)
.-|++.++||+|+||.||+|...+|+.||||+++.... ... .. ...|...|.++.+..
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999988899999998764311 000 01 123556666665444
Q ss_pred eEeEEeEEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc
Q 043333 633 LVKLYGCCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATNVLLD 712 (809)
Q Consensus 633 Iv~l~~~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~NILl~ 712 (809)
+....-+... ..++||||+++++|.++... .....++.|++.+|.|||+. +||||||||.|||++
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 3221111112 23799999999988765411 12356889999999999998 899999999999998
Q ss_pred CCC----------ceEEEecCCccc
Q 043333 713 KDL----------NPKISDFGLAKL 727 (809)
Q Consensus 713 ~~~----------~~kl~DfGla~~ 727 (809)
+++ .+.|+||+=+..
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCCcccccccccceEEEEeCCccc
Confidence 876 389999996643
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=4.9e-17 Score=162.61 Aligned_cols=155 Identities=21% Similarity=0.302 Sum_probs=114.6
Q ss_pred hcCCccCcEEeecccccccCCCc------cccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhh
Q 043333 63 VASISTLADLTLEFNQFSGDLPA------ELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQ 136 (809)
Q Consensus 63 l~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 136 (809)
+.....++.++++.+.+++.+|. .+..+++|++|+|++|++++ +| .+.++++|+.|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44556777788888888877776 78888888888888888885 56 7888888888888888888 6777777
Q ss_pred cccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCC-ccccCCcCCceeeeccccccCCCCh----------
Q 043333 137 NWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPF-PRLSNLKNMNYLILRSGNIIGEMPE---------- 205 (809)
Q Consensus 137 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~---------- 205 (809)
.+++|+.|+|++|++++ +| .+..+++|+.|++++|.+..++. ..+..+++|++|++++|.+.+..|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 77888888888888875 34 56677777777777777766543 4567777777777777777666554
Q ss_pred hhhccccccEEeccCCCCC
Q 043333 206 YLGQMIGLRVLDLSFNKLS 224 (809)
Q Consensus 206 ~~~~l~~L~~L~Ls~N~l~ 224 (809)
.+..+++|+.|| +|.++
T Consensus 169 ~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHCSSCSEEC--CGGGT
T ss_pred HHHhCCCcEEEC--CcccC
Confidence 266777777765 55554
No 388
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.56 E-value=1.5e-17 Score=195.02 Aligned_cols=266 Identities=17% Similarity=0.137 Sum_probs=164.7
Q ss_pred ccccCCC--CCc-cCCccCCCCCCCCEEEccCC-CCCCCCCcccCCCC-ccccccc------------------------
Q 043333 2 RILKSQN--LPG-RLPPELTRLPFLQEIDLTRN-YLNGTIPSEWASLP-LVNLPLW------------------------ 52 (809)
Q Consensus 2 L~L~~nn--l~~-~lp~~l~~l~~L~~L~Ls~n-~l~~~~p~~~~~l~-L~~L~l~------------------------ 52 (809)
|+|++|+ +.. .++.-+..+++|++|+|++| .+. .++..+..++ |++|.+.
T Consensus 189 L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L 267 (594)
T 2p1m_B 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKEL 267 (594)
T ss_dssp EECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTC
T ss_pred EEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCc
Confidence 5677765 211 11111245688999999988 333 2343333332 4444422
Q ss_pred -------cccCCCCchhhcCCccCcEEeecccccccCCC-ccccCCCCCCEEEccCCccCcc-Cchhhhcccccceeeee
Q 043333 53 -------KQANGAIPKAVASISTLADLTLEFNQFSGDLP-AELGNLINLEKLHLNSNNFTGK-LPESFANLTRLKHFRIS 123 (809)
Q Consensus 53 -------~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls 123 (809)
+.....+|..+..+++|++|+|++|.+++... ..+..+++|++|+|++| ++.. ++.....+++|+.|+|+
T Consensus 268 ~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~ 346 (594)
T 2p1m_B 268 RCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVF 346 (594)
T ss_dssp CEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEE
T ss_pred ccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEe
Confidence 22223344444567788888888888664322 23567788888888877 4422 22223357888888884
Q ss_pred c---------ccccCcCchhhh-cccccceEecccCcCCCCCCcccc-CCCCCCEEecc--C----CCCCCCCCcc----
Q 043333 124 D---------NHFTGQIPDYIQ-NWTKLEKLFIEGSGLAGPIPSGIA-SLVELTDLRIS--D----LNGPEGPFPR---- 182 (809)
Q Consensus 124 ~---------N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~--~----n~l~~~~~~~---- 182 (809)
+ |.+++.....+. ++++|+.|.+..|++++..+..+. .+++|+.|+++ + +.++..+...
T Consensus 347 ~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~ 426 (594)
T 2p1m_B 347 PSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGA 426 (594)
T ss_dssp CSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHH
T ss_pred cCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHH
Confidence 3 445433333333 478888888888888765555554 57888888888 4 5555444321
Q ss_pred -ccCCcCCceeeeccccccCCCChhhhc-cccccEEeccCCCCCCCCCCCC-C-CCCccEEEeeCccCCCCCChhh-h-h
Q 043333 183 -LSNLKNMNYLILRSGNIIGEMPEYLGQ-MIGLRVLDLSFNKLSGVIPSNF-S-GSGLTYMYLTGNLLTGPVPDWI-V-R 256 (809)
Q Consensus 183 -l~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~-~~~L~~L~Ls~N~l~~~~p~~~-~-~ 256 (809)
+..+++|+.|+|++ +++...+..+.. +++|+.|+|++|.+++..+..+ . .++|+.|+|++|++++..+..+ . .
T Consensus 427 l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l 505 (594)
T 2p1m_B 427 IVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKL 505 (594)
T ss_dssp HHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGG
T ss_pred HHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhC
Confidence 56778888888876 666655555655 7888888888888865544333 2 3788888888888865443322 2 3
Q ss_pred ccCccccccCCccc
Q 043333 257 KRNKHIDLSYNNFI 270 (809)
Q Consensus 257 ~~l~~L~Ls~N~l~ 270 (809)
.+++.|++++|+++
T Consensus 506 ~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 506 ETMRSLWMSSCSVS 519 (594)
T ss_dssp GGSSEEEEESSCCB
T ss_pred CCCCEEeeeCCCCC
Confidence 57788888888774
No 389
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.55 E-value=1.3e-16 Score=186.94 Aligned_cols=265 Identities=14% Similarity=0.093 Sum_probs=127.0
Q ss_pred ccccCC-CCCcc-CCccCCCCCCCCEEEccCCCCCCCCCcccCC----C-CccccccccccCCCCc-----hhhcCCccC
Q 043333 2 RILKSQ-NLPGR-LPPELTRLPFLQEIDLTRNYLNGTIPSEWAS----L-PLVNLPLWKQANGAIP-----KAVASISTL 69 (809)
Q Consensus 2 L~L~~n-nl~~~-lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~----l-~L~~L~l~~n~~~~ip-----~~l~~l~~L 69 (809)
|+|++| .+... ++..+..+++|++|+|++|.+++..+..+.. + .|+.|+++++. ..++ ..+..+++|
T Consensus 135 L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L 213 (594)
T 2p1m_B 135 LVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVTRCPNL 213 (594)
T ss_dssp EEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTC
T ss_pred EeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHHhCCCC
Confidence 556666 33321 3333446777777777777766544443332 2 26677776665 2332 122345777
Q ss_pred cEEeeccc-ccccCCCccccCC------------------------------------------------------CCCC
Q 043333 70 ADLTLEFN-QFSGDLPAELGNL------------------------------------------------------INLE 94 (809)
Q Consensus 70 ~~L~L~~N-~l~~~~p~~~~~l------------------------------------------------------~~L~ 94 (809)
++|+|++| .+++ ++..+..+ ++|+
T Consensus 214 ~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~ 292 (594)
T 2p1m_B 214 KSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLT 292 (594)
T ss_dssp CEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCC
T ss_pred cEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCC
Confidence 77777766 2222 33333333 4444
Q ss_pred EEEccCCccCccCc-hhhhcccccceeeeecccccCc-CchhhhcccccceEeccc---------CcCCCCCCcccc-CC
Q 043333 95 KLHLNSNNFTGKLP-ESFANLTRLKHFRISDNHFTGQ-IPDYIQNWTKLEKLFIEG---------SGLAGPIPSGIA-SL 162 (809)
Q Consensus 95 ~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~---------N~l~~~~p~~~~-~l 162 (809)
+|+|++|.+++... ..+.++++|+.|+|++| +... ++.....+++|++|+|.+ +.+++.....+. .+
T Consensus 293 ~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~ 371 (594)
T 2p1m_B 293 TLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGC 371 (594)
T ss_dssp EEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHC
T ss_pred EEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhc
Confidence 44444444432111 11234444444544444 2211 111122344555555422 222221111111 24
Q ss_pred CCCCEEeccCCCCCCCCCcccc-CCcCCceeeec--c----ccccCCC-----ChhhhccccccEEeccCCCCCCCCCCC
Q 043333 163 VELTDLRISDLNGPEGPFPRLS-NLKNMNYLILR--S----GNIIGEM-----PEYLGQMIGLRVLDLSFNKLSGVIPSN 230 (809)
Q Consensus 163 ~~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~Ls--~----N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 230 (809)
++|+.|.++.|.++......+. .+++|+.|+|+ + |+++... +..+..+++|+.|+|++ .+++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 5555555555555443333332 35666666666 2 3333221 11245566666666655 444332222
Q ss_pred CC--CCCccEEEeeCccCCCCCChhh--hhccCccccccCCccc
Q 043333 231 FS--GSGLTYMYLTGNLLTGPVPDWI--VRKRNKHIDLSYNNFI 270 (809)
Q Consensus 231 ~~--~~~L~~L~Ls~N~l~~~~p~~~--~~~~l~~L~Ls~N~l~ 270 (809)
+. .++|+.|+|++|.+++..+..+ ...+++.|+|++|+++
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 22 3667777777777765444333 1256677777777764
No 390
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=5e-15 Score=160.29 Aligned_cols=96 Identities=14% Similarity=0.008 Sum_probs=84.6
Q ss_pred CcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCcc-EEEeeCccCCCCCChhhhh-ccCccc
Q 043333 186 LKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLT-YMYLTGNLLTGPVPDWIVR-KRNKHI 262 (809)
Q Consensus 186 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~-~L~Ls~N~l~~~~p~~~~~-~~l~~L 262 (809)
+++|+.|+|++|+++.+.+.+|.++++|+.|+|++| ++.+.+..|.. .+|+ .+++.+ .++.+.+..|.. ..++.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 789999999999999999999999999999999998 88899999988 8899 999999 888777888865 678999
Q ss_pred cccCCccccCCCCCccccccc
Q 043333 263 DLSYNNFIDGSSDSNCENQSV 283 (809)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~ 283 (809)
++++|.++......+.....+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCC
T ss_pred EeCCCccCccchhhhcCCcch
Confidence 999999998887777654443
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=1.1e-14 Score=142.44 Aligned_cols=133 Identities=20% Similarity=0.273 Sum_probs=65.8
Q ss_pred cCCccCcEEeecccccccCCCccccCCC-CCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccc
Q 043333 64 ASISTLADLTLEFNQFSGDLPAELGNLI-NLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLE 142 (809)
Q Consensus 64 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 142 (809)
.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|+|++. ..+..+++|+.|+|++|+|++..+..+..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 34455555555555555 2332 22222 555555555555533 3445555555555555555533333334445555
Q ss_pred eEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCC-ccccCCcCCceeeeccccccCCCCh---hhhccccccEEec
Q 043333 143 KLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPF-PRLSNLKNMNYLILRSGNIIGEMPE---YLGQMIGLRVLDL 218 (809)
Q Consensus 143 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~L 218 (809)
.|+|++|+++ .++. ..+..+++|+.|+|++|.+....+. .+..+++|+.||+
T Consensus 92 ~L~L~~N~i~------------------------~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 92 ELILTNNSLV------------------------ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp EEECCSCCCC------------------------CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred EEECCCCcCC------------------------cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCC
Confidence 5555555443 3321 2344555555555555655533222 3666666666666
Q ss_pred cCCCCC
Q 043333 219 SFNKLS 224 (809)
Q Consensus 219 s~N~l~ 224 (809)
++|.+.
T Consensus 148 ~~n~~~ 153 (176)
T 1a9n_A 148 QKVKLK 153 (176)
T ss_dssp EECCHH
T ss_pred CcCCHH
Confidence 666553
No 392
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.52 E-value=9.8e-14 Score=153.94 Aligned_cols=230 Identities=13% Similarity=0.087 Sum_probs=195.0
Q ss_pred CCccCCccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCchhhcCCccCcEEeecccccccCCCccc
Q 043333 9 LPGRLPPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAEL 87 (809)
Q Consensus 9 l~~~lp~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~ 87 (809)
+...-..+|.+ .+|+.++|.+ .++...+..|..+. |+.+.+.+|.+..||.......+|+.+.|.++ ++.+-...|
T Consensus 146 i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF 222 (401)
T 4fdw_A 146 LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGSQAF 222 (401)
T ss_dssp CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECTTTT
T ss_pred ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCc-hheehhhHh
Confidence 55455556777 4799999996 78877778899885 99999999999999886655799999999855 776777799
Q ss_pred cCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCC-----CCCCccccCC
Q 043333 88 GNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLA-----GPIPSGIASL 162 (809)
Q Consensus 88 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l 162 (809)
.++++|+.++|.+| ++.+...+|.+ .+|+.+.| .|.++...+.+|.++++|+.+++.+|.+. ...+.+|.++
T Consensus 223 ~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c 299 (401)
T 4fdw_A 223 LKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGC 299 (401)
T ss_dssp TTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTC
T ss_pred hCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCC
Confidence 99999999999985 66566778888 79999999 55677667788999999999999998875 4557789999
Q ss_pred CCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC--CCccEEE
Q 043333 163 VELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG--SGLTYMY 240 (809)
Q Consensus 163 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~ 240 (809)
++|+.+.+. +.++.+....|.++++|+.|.|.. +++.....+|.++ +|+.|++++|.+..+.+..|.. .+++.|+
T Consensus 300 ~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~-~l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~ 376 (401)
T 4fdw_A 300 PKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPA-NVTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIR 376 (401)
T ss_dssp TTCCEECCC-TTCCEECTTTTTTCCSCCEEEECT-TCCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEE
T ss_pred ccCCeEEeC-CceEEEhhhhhcCCCCccEEEECc-cccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEE
Confidence 999999999 569999999999999999999965 4888888899999 9999999999999888888876 5788998
Q ss_pred eeCccCC
Q 043333 241 LTGNLLT 247 (809)
Q Consensus 241 Ls~N~l~ 247 (809)
+..|.+.
T Consensus 377 vp~~~~~ 383 (401)
T 4fdw_A 377 VPAESVE 383 (401)
T ss_dssp ECGGGHH
T ss_pred eCHHHHH
Confidence 8877654
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=9.4e-15 Score=142.98 Aligned_cols=128 Identities=15% Similarity=0.100 Sum_probs=106.1
Q ss_pred CCccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeee
Q 043333 44 LPLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRIS 123 (809)
Q Consensus 44 l~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 123 (809)
..++.|++++|.+..+|......++|+.|+|++|.+++. ..|..+++|++|+|++|+|++..+..+..+++|++|+|+
T Consensus 19 ~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 96 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 96 (176)
T ss_dssp TSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred CCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECC
Confidence 358999999999999976434445999999999999965 679999999999999999997666667999999999999
Q ss_pred cccccCcCch--hhhcccccceEecccCcCCCCCCcc----ccCCCCCCEEeccCCCC
Q 043333 124 DNHFTGQIPD--YIQNWTKLEKLFIEGSGLAGPIPSG----IASLVELTDLRISDLNG 175 (809)
Q Consensus 124 ~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~l~~n~l 175 (809)
+|+|+ .+|. .+..+++|+.|+|++|.++ .+|.. +..+++|+.|++++|..
T Consensus 97 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 97 NNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 99997 5665 7899999999999999998 45553 66666676666666554
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.2e-16 Score=159.75 Aligned_cols=136 Identities=19% Similarity=0.161 Sum_probs=85.1
Q ss_pred ccCCCCCCEEEccCCccCccCch------hhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCcccc
Q 043333 87 LGNLINLEKLHLNSNNFTGKLPE------SFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIA 160 (809)
Q Consensus 87 ~~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 160 (809)
+.....++.++++.|.+++.+|. .+.++++|++|+|++|++++ +| .+..+++|+.|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44456677777777777776665 77888888888888888875 56 7777888888888888877 5666555
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCC-hhhhccccccEEeccCCCCCCCC
Q 043333 161 SLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMP-EYLGQMIGLRVLDLSFNKLSGVI 227 (809)
Q Consensus 161 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~ 227 (809)
.+++|+.|++++|.++.++ .+..+++|+.|+|++|++....+ ..+..+++|+.|++++|++++.+
T Consensus 91 ~~~~L~~L~L~~N~l~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 91 VADTLEELWISYNQIASLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp HHHHCSEEEEEEEECCCHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred cCCcCCEEECcCCcCCcCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 5566666666665555432 34455555555555555544322 34444555555555555544443
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=3.2e-13 Score=131.24 Aligned_cols=86 Identities=23% Similarity=0.296 Sum_probs=45.1
Q ss_pred ccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEec
Q 043333 67 STLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFI 146 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 146 (809)
++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44555555555555444555555555555555555555444444455555555555555555444444555555555555
Q ss_pred ccCcCC
Q 043333 147 EGSGLA 152 (809)
Q Consensus 147 ~~N~l~ 152 (809)
++|.+.
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 555554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=5.4e-13 Score=129.66 Aligned_cols=105 Identities=18% Similarity=0.223 Sum_probs=67.3
Q ss_pred cCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecc
Q 043333 68 TLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIE 147 (809)
Q Consensus 68 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 147 (809)
..+.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3466777777777 4565442 667777777777776666677777777777777777776555556666666666666
Q ss_pred cCcCCCCCCccccCCCCCCEEeccCCCC
Q 043333 148 GSGLAGPIPSGIASLVELTDLRISDLNG 175 (809)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l 175 (809)
+|+|++..+..|..+++|+.|++++|.+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 114 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPW 114 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCC
Confidence 6666654444455555555554444443
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=4.3e-13 Score=130.88 Aligned_cols=86 Identities=26% Similarity=0.371 Sum_probs=40.4
Q ss_pred ccCcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEec
Q 043333 67 STLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFI 146 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 146 (809)
++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34445555555554444444444555555555555554433333444444555555555444333333444444444444
Q ss_pred ccCcCC
Q 043333 147 EGSGLA 152 (809)
Q Consensus 147 ~~N~l~ 152 (809)
++|.+.
T Consensus 113 ~~N~~~ 118 (174)
T 2r9u_A 113 YNNPWD 118 (174)
T ss_dssp CSSCBC
T ss_pred CCCCcc
Confidence 444444
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=9.8e-13 Score=128.34 Aligned_cols=105 Identities=19% Similarity=0.248 Sum_probs=69.7
Q ss_pred CcEEeecccccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEeccc
Q 043333 69 LADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEG 148 (809)
Q Consensus 69 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 148 (809)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 356777777776 5666553 6777777777777776677777777777777777777765555566677777777777
Q ss_pred CcCCCCCCccccCCCCCCEEeccCCCCC
Q 043333 149 SGLAGPIPSGIASLVELTDLRISDLNGP 176 (809)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 176 (809)
|+|++..+..|..+++|+.|++++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 7776444444555555555555555443
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=2.1e-14 Score=157.77 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=85.3
Q ss_pred ccCcEEeecccccccCCCccccC-----CCCCCEEEccCCccCccCchhh-hcccccceeeeecccccCcCchhhh----
Q 043333 67 STLADLTLEFNQFSGDLPAELGN-----LINLEKLHLNSNNFTGKLPESF-ANLTRLKHFRISDNHFTGQIPDYIQ---- 136 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~---- 136 (809)
++|+.|+|++|.++......+.. .++|++|+|++|.|+......+ ..+++|+.|+|++|.|+......+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 46777777777776433333222 2577777777777764322232 2356677777777777644333332
Q ss_pred -cccccceEecccCcCCCC----CCccccCCCCCCEEeccCCCCCCCC----CccccCCcCCceeeeccccccCC----C
Q 043333 137 -NWTKLEKLFIEGSGLAGP----IPSGIASLVELTDLRISDLNGPEGP----FPRLSNLKNMNYLILRSGNIIGE----M 203 (809)
Q Consensus 137 -~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~Ls~N~l~~~----~ 203 (809)
..++|+.|+|++|.|+.. ++..+..+++|+.|+|++|.++... ...+...++|+.|+|++|.++.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 245677777777776532 2233345556666666666554433 12234445555555555555442 2
Q ss_pred ChhhhccccccEEeccCCCCC
Q 043333 204 PEYLGQMIGLRVLDLSFNKLS 224 (809)
Q Consensus 204 p~~~~~l~~L~~L~Ls~N~l~ 224 (809)
+..+...++|++|||++|.|+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHhCCCCCEEeccCCCCC
Confidence 223334455555555555554
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=1.2e-13 Score=151.66 Aligned_cols=166 Identities=16% Similarity=0.120 Sum_probs=124.6
Q ss_pred CCCCCEEEccCCccCccCchhhhcc-----cccceeeeecccccCcCchhh-hcccccceEecccCcCCCCCCccc----
Q 043333 90 LINLEKLHLNSNNFTGKLPESFANL-----TRLKHFRISDNHFTGQIPDYI-QNWTKLEKLFIEGSGLAGPIPSGI---- 159 (809)
Q Consensus 90 l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~---- 159 (809)
+++|+.|+|++|.|+......+..+ ++|+.|+|++|.|+......+ ..+++|+.|+|++|+|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4689999999999996555555544 699999999999975444343 456899999999999985444444
Q ss_pred -cCCCCCCEEeccCCCCCCCCCcc----ccCCcCCceeeeccccccCCC----ChhhhccccccEEeccCCCCCCCCCCC
Q 043333 160 -ASLVELTDLRISDLNGPEGPFPR----LSNLKNMNYLILRSGNIIGEM----PEYLGQMIGLRVLDLSFNKLSGVIPSN 230 (809)
Q Consensus 160 -~~l~~L~~L~l~~n~l~~~~~~~----l~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 230 (809)
...++|+.|+|++|.++...... +..+++|++|+|++|.+.... +..+...++|+.|+|++|.|+......
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 24678999999999887654443 467889999999999987643 566777889999999999987543322
Q ss_pred C-----CCCCccEEEeeCccCCCCCChhhh
Q 043333 231 F-----SGSGLTYMYLTGNLLTGPVPDWIV 255 (809)
Q Consensus 231 ~-----~~~~L~~L~Ls~N~l~~~~p~~~~ 255 (809)
+ ..++|+.|+|++|.|+......+.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 2 237899999999998865555443
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=1.8e-11 Score=133.20 Aligned_cols=130 Identities=19% Similarity=0.223 Sum_probs=91.5
Q ss_pred EecccC-cCCCCCCccccCCCCCCEEeccC-CCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCC
Q 043333 144 LFIEGS-GLAGPIPSGIASLVELTDLRISD-LNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFN 221 (809)
Q Consensus 144 L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 221 (809)
++++++ +|+ .+|. +..+++|+.|+|++ |.+..++...|.++++|+.|+|++|+|.+..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 555 3455 66666666666664 6666666666777888888888888888888888999999999999999
Q ss_pred CCCCCCCCCCCCCCccEEEeeCccCCCCCC-hhhhh-ccCccccccCCccccCCCC
Q 043333 222 KLSGVIPSNFSGSGLTYMYLTGNLLTGPVP-DWIVR-KRNKHIDLSYNNFIDGSSD 275 (809)
Q Consensus 222 ~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~-~~l~~L~Ls~N~l~~~~~~ 275 (809)
+|+++++..+....|+.|+|++|++...-. .++.. .......+..+.++|..+.
T Consensus 91 ~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCCceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999888888877559999999999986433 22221 2223344556677776554
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=1.1e-11 Score=135.00 Aligned_cols=96 Identities=20% Similarity=0.256 Sum_probs=51.2
Q ss_pred cCCCCchhhcCCccCcEEeecc-cccccCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCch
Q 043333 55 ANGAIPKAVASISTLADLTLEF-NQFSGDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPD 133 (809)
Q Consensus 55 ~~~~ip~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 133 (809)
.+..||. +..+++|+.|+|++ |.|++..+..|.++++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..+.
T Consensus 20 ~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 98 (347)
T 2ifg_A 20 ALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWK 98 (347)
T ss_dssp CCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCST
T ss_pred CCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHH
Confidence 4444555 55555555555554 555544445555555555555555555555555555555555555555555544444
Q ss_pred hhhcccccceEecccCcCC
Q 043333 134 YIQNWTKLEKLFIEGSGLA 152 (809)
Q Consensus 134 ~~~~l~~L~~L~L~~N~l~ 152 (809)
.|..++ |+.|+|++|.+.
T Consensus 99 ~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 99 TVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp TTCSCC-CCEEECCSSCCC
T ss_pred HcccCC-ceEEEeeCCCcc
Confidence 344333 555555555544
No 403
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=3.8e-11 Score=125.13 Aligned_cols=146 Identities=14% Similarity=0.072 Sum_probs=113.9
Q ss_pred HHhcCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcC-CCceEeEEeEEEeCCeEEEEE
Q 043333 572 AATNNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 572 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~lV~ 650 (809)
..-..|.....++.|+.+.||++... ++.+++|+...........+.+|+++++.+. |..+.++++++.+.+..++||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34456777788888889999998754 6789999986533233456889999999885 677889999999999999999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEE------------------------------------ 694 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------ 694 (809)
||++|.+|.+.+.. ......++.+++++|..||+.
T Consensus 90 e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 90 SEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp ECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 99999999876411 112346888999999999981
Q ss_pred --------------------CCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 695 --------------------SRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 695 --------------------~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
.+..++|||++|.||+++++..+.|+||+.+..
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 113589999999999998766667999997753
No 404
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.04 E-value=2.9e-10 Score=117.82 Aligned_cols=129 Identities=17% Similarity=0.117 Sum_probs=98.0
Q ss_pred ccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCc--eEeEEeEEEeCCeEEEEEEcccCCchhhh
Q 043333 584 GEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPN--LVKLYGCCIEGNQLLLIYEYMENNSLARA 661 (809)
Q Consensus 584 G~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~~~~~~~~~~~lV~ey~~~gsL~~~ 661 (809)
+.|..+.||++...+|+.+++|+.... ....+..|+++++.+++.+ +.+++++....+..++||||+++.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 355669999998777888999997543 2356788999999986545 456888888888899999999998884
Q ss_pred ccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------------
Q 043333 662 LFGPEEHRLKLDWPTRHSICIGLARGLAYLHEES---------------------------------------------- 695 (809)
Q Consensus 662 L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~---------------------------------------------- 695 (809)
... .+ ...++.++++.|..||+..
T Consensus 104 ~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 104 SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 211 11 2356778888888888642
Q ss_pred ---------CCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 696 ---------RLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 696 ---------~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+..++|||++|.||+++++..+.|+|||.+..
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12389999999999998876677999998754
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.91 E-value=8.4e-09 Score=114.13 Aligned_cols=150 Identities=14% Similarity=0.056 Sum_probs=64.8
Q ss_pred cccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccC----------------
Q 043333 86 ELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGS---------------- 149 (809)
Q Consensus 86 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N---------------- 149 (809)
+|.++++|+.+.+.++. ..+....|.++++|+.+.+..| ++......|.++..|+.+.+..+
T Consensus 157 aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~ 234 (394)
T 4fs7_A 157 AFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKN 234 (394)
T ss_dssp TTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCE
T ss_pred hhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCce
Confidence 34455555555554432 2233444555555555555444 22222333444444333333221
Q ss_pred -----cCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCC
Q 043333 150 -----GLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLS 224 (809)
Q Consensus 150 -----~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 224 (809)
.++......|..+..|+.+.+..+ ...+....|.++..|+.+.+..+.+ ....|..+.+|+.+.+.++ ++
T Consensus 235 i~ip~~~~~i~~~~f~~~~~l~~~~~~~~-~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~ 309 (394)
T 4fs7_A 235 IIIPDSFTELGKSVFYGCTDLESISIQNN-KLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VK 309 (394)
T ss_dssp EEECTTCCEECSSTTTTCSSCCEEEECCT-TCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CC
T ss_pred EEECCCceecccccccccccceeEEcCCC-cceeeccccccccccceeccCceee---ccccccccccccccccccc-cc
Confidence 112122344556666777766554 2333444444444444444433321 1223444444444444332 33
Q ss_pred CCCCCCCCC-CCccEEEee
Q 043333 225 GVIPSNFSG-SGLTYMYLT 242 (809)
Q Consensus 225 ~~~p~~~~~-~~L~~L~Ls 242 (809)
.+....|.. .+|+.++|.
T Consensus 310 ~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 310 FIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp EECTTTTTTCTTCCEECCC
T ss_pred eechhhhcCCCCCCEEEeC
Confidence 333344433 444444443
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=3.8e-10 Score=122.89 Aligned_cols=157 Identities=18% Similarity=0.230 Sum_probs=86.3
Q ss_pred hhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCcccc--CCCCCCEEeccC--CC-CCCCCC---
Q 043333 109 ESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIA--SLVELTDLRISD--LN-GPEGPF--- 180 (809)
Q Consensus 109 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~l~~--n~-l~~~~~--- 180 (809)
..+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.+.......+. .+++|+.|+|+. |. ......
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 33444555555555555211 1121 2 245555555555554422222222 455566555532 11 111000
Q ss_pred -ccc--cCCcCCceeeeccccccCCCChhhh---ccccccEEeccCCCCCCCCC----CCCC-CCCccEEEeeCccCCCC
Q 043333 181 -PRL--SNLKNMNYLILRSGNIIGEMPEYLG---QMIGLRVLDLSFNKLSGVIP----SNFS-GSGLTYMYLTGNLLTGP 249 (809)
Q Consensus 181 -~~l--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p----~~~~-~~~L~~L~Ls~N~l~~~ 249 (809)
..+ ..+++|+.|+|++|.+....+..+. .+++|++|+|+.|.|++..+ ..+. +++|+.|+|++|.++..
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 112 3478899999988888765544444 47889999999999876422 2212 27899999999988754
Q ss_pred CChhhhhccCccccccCCc
Q 043333 250 VPDWIVRKRNKHIDLSYNN 268 (809)
Q Consensus 250 ~p~~~~~~~l~~L~Ls~N~ 268 (809)
.-..+...-...++++.|+
T Consensus 323 ~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 323 MKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHCCSEEECCSBC
T ss_pred HHHHHHHHcCCEEEecCCc
Confidence 4444432113557777776
No 407
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.89 E-value=4.3e-09 Score=114.88 Aligned_cols=142 Identities=18% Similarity=0.269 Sum_probs=105.9
Q ss_pred CCCeeccCCCccEEEeEeeCCeEEEEEEec--ccC-cccchhHHHHHHHHhhcC--CCceEeEEeEEEeC---CeEEEEE
Q 043333 579 PDNKIGEGGFGPVYKGLLADGKVIAVKQLS--SKS-KQGNREFVNEIGMISALQ--HPNLVKLYGCCIEG---NQLLLIY 650 (809)
Q Consensus 579 ~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~--~~~-~~~~~~f~~Ei~~l~~l~--H~nIv~l~~~~~~~---~~~~lV~ 650 (809)
..+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999988654 567788765 322 123457888999999987 45578899988776 4479999
Q ss_pred EcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 043333 651 EYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEES----------------------------------- 695 (809)
Q Consensus 651 ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------------- 695 (809)
||+++..+.+.. ...++...+..++.++++.|..||+..
T Consensus 121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999998775422 123677888899999999999999731
Q ss_pred --------------------CCCeEEcCCCCCCEEEcCCCc--eEEEecCCccc
Q 043333 696 --------------------RLKIVHRDIKATNVLLDKDLN--PKISDFGLAKL 727 (809)
Q Consensus 696 --------------------~~~iiH~Dlkp~NILl~~~~~--~kl~DfGla~~ 727 (809)
+..++|||+++.||+++.++. +.|+||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247899999999999997753 58999998864
No 408
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.86 E-value=1.6e-09 Score=115.42 Aligned_cols=186 Identities=18% Similarity=0.206 Sum_probs=122.0
Q ss_pred CCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcC-CCc--eEeEEeEEEeCC---eEEEEEEcc
Q 043333 580 DNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-HPN--LVKLYGCCIEGN---QLLLIYEYM 653 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-H~n--Iv~l~~~~~~~~---~~~lV~ey~ 653 (809)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+.+......+ ..++||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 5679999999999864 45788875432 23456888999998873 433 334554443333 347899999
Q ss_pred cCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------------------
Q 043333 654 ENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEE--------------------------------------- 694 (809)
Q Consensus 654 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~--------------------------------------- 694 (809)
+|.++.+... ..++..++..++.++++.|..||+.
T Consensus 99 ~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9988865331 2356667778888888888888861
Q ss_pred ----------------CCCCeEEcCCCCCCEEEcC--CCceEEEecCCccccCCCCcceecc--------------cccc
Q 043333 695 ----------------SRLKIVHRDIKATNVLLDK--DLNPKISDFGLAKLDEEDNTHISTR--------------IAGT 742 (809)
Q Consensus 695 ----------------~~~~iiH~Dlkp~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~--------------~~gt 742 (809)
.++.++|+|++|.||++++ +..+.|+||+.+....... ..... ....
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHHHH
Confidence 1245799999999999998 4567899999886542211 00000 0001
Q ss_pred ccccc-hhhhccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 043333 743 FGYMA-PEYAMRGYLTDKADVYSFGIVALEIVSGRSNVI 780 (809)
Q Consensus 743 ~~y~a-PE~~~~~~~~~ksDVwSlGvil~elltGk~P~~ 780 (809)
.+... |+..... ....+.|+++.++|++.+|+.+|.
T Consensus 252 Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 252 YKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11222 3322211 223689999999999999998874
No 409
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.84 E-value=4.3e-08 Score=108.44 Aligned_cols=247 Identities=13% Similarity=0.129 Sum_probs=159.7
Q ss_pred CccCCCCCCCCEEEccCCC---CCCCCCcccCCCC-ccccccccccCCCCc-hhhcCCccCcEEeecccccccCCCcccc
Q 043333 14 PPELTRLPFLQEIDLTRNY---LNGTIPSEWASLP-LVNLPLWKQANGAIP-KAVASISTLADLTLEFNQFSGDLPAELG 88 (809)
Q Consensus 14 p~~l~~l~~L~~L~Ls~n~---l~~~~p~~~~~l~-L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 88 (809)
..+|.++++|+.+.++.|. ++......|.... |+.+.+.++ +..|+ .++..+.+|+.+.+..+- .......|.
T Consensus 80 ~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~ 157 (394)
T 4gt6_A 80 SNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGV-TSVADGMFS 157 (394)
T ss_dssp TTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTC-CEECTTTTT
T ss_pred HHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccccccee-eeeccccee
Confidence 3457777888888887764 5544455666553 666655544 44443 366777888888886543 325555777
Q ss_pred CCCCCCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCc------------------
Q 043333 89 NLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSG------------------ 150 (809)
Q Consensus 89 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~------------------ 150 (809)
.+.+|+.+.+.++ ++.+...+|.+ .+|+.+.+..+-.. ....+|.++.+|+......+.
T Consensus 158 ~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (394)
T 4gt6_A 158 YCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYA 234 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEE
T ss_pred cccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceecccccccccccceeeccccccccc
Confidence 7778888877654 44344444543 46776666554332 334445555555544332221
Q ss_pred ------------------CCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhcccc
Q 043333 151 ------------------LAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIG 212 (809)
Q Consensus 151 ------------------l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 212 (809)
++.....+|.++..|+.+.+.++ ...+....|.++++|+.+.+. +.++.....+|.++.+
T Consensus 235 ~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~-~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~ 312 (394)
T 4gt6_A 235 LIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDS-VVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCIS 312 (394)
T ss_dssp EEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTT-CCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTT
T ss_pred ccccccccccceEEcCCcceEcccceeeecccccEEecccc-cceecCcccccccccccccCC-CcccccCceeecCCCC
Confidence 12122346677788888888653 455667778888888888885 5666677778888888
Q ss_pred ccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCCcc
Q 043333 213 LRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYNNF 269 (809)
Q Consensus 213 L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N~l 269 (809)
|+.++|..+ ++.+....|.. .+|+.+.|..+ ++.+....|.. ..|+.+++.+|..
T Consensus 313 L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 313 LKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred cCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 999888765 77677777877 88888888654 66566666655 6778888887754
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=9.6e-10 Score=119.73 Aligned_cols=84 Identities=14% Similarity=0.176 Sum_probs=48.0
Q ss_pred CCCCCEEeccCCCCCCCCCccc---cCCcCCceeeeccccccCCC----ChhhhccccccEEeccCCCCCCCCCCCCCCC
Q 043333 162 LVELTDLRISDLNGPEGPFPRL---SNLKNMNYLILRSGNIIGEM----PEYLGQMIGLRVLDLSFNKLSGVIPSNFSGS 234 (809)
Q Consensus 162 l~~L~~L~l~~n~l~~~~~~~l---~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 234 (809)
+++|+.|++.+|.+.......+ ..+++|+.|+|+.|.+.... +..+..+++|+.|+|++|.|+...-..+...
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 4566666666655543211112 24667777788777776643 3334567788888888887764322222211
Q ss_pred CccEEEeeCcc
Q 043333 235 GLTYMYLTGNL 245 (809)
Q Consensus 235 ~L~~L~Ls~N~ 245 (809)
-...+++++|+
T Consensus 331 lg~~~~~~~~~ 341 (362)
T 2ra8_A 331 LPMKIDVSDSQ 341 (362)
T ss_dssp CCSEEECCSBC
T ss_pred cCCEEEecCCc
Confidence 13557787776
No 411
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.83 E-value=3.2e-08 Score=109.42 Aligned_cols=218 Identities=13% Similarity=0.086 Sum_probs=133.6
Q ss_pred ccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCc-hhhcCCccCcEEeecccccccCCCccccCCCC
Q 043333 15 PELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIP-KAVASISTLADLTLEFNQFSGDLPAELGNLIN 92 (809)
Q Consensus 15 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 92 (809)
.+|..+++|+.+++.++. .......|.... |+.+.+..+ +..|+ .++.++..|+.+.+..+... +...+....+
T Consensus 156 ~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~ 231 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTG 231 (394)
T ss_dssp TTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCC
T ss_pred hhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCC
Confidence 346666677777776543 324444555543 666666544 44443 35566666666666655433 2222333456
Q ss_pred CCEEEccCCccCccCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccC
Q 043333 93 LEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISD 172 (809)
Q Consensus 93 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 172 (809)
|+.+.+..+ ++.+....|.++.+|+.+.+..+... .....|.++..|+.+.+..+.+. ...|..+.+|+.+.+.+
T Consensus 232 l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 232 VKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECT
T ss_pred CceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccccc
Confidence 666666543 33344556667777777777666544 55556777777777766655432 34566777777777765
Q ss_pred CCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCc
Q 043333 173 LNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGN 244 (809)
Q Consensus 173 n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N 244 (809)
+ ++.+....|.++.+|+.++|.+ .++.....+|.++++|+.++|..| ++.+....|.. .+|+.+++..+
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~-~v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPY-LVEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred c-cceechhhhcCCCCCCEEEeCC-cccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 3 6666667777777777777754 365566667777777777777766 66666667766 77777777544
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.67 E-value=1.9e-07 Score=102.47 Aligned_cols=245 Identities=11% Similarity=-0.001 Sum_probs=157.3
Q ss_pred CccCCCCCCCCEEEccCCCCCCCCCcccCCCCccccccccccCCCCchhhcCCccCcEEeecccccccCCCccccCCCCC
Q 043333 14 PPELTRLPFLQEIDLTRNYLNGTIPSEWASLPLVNLPLWKQANGAIPKAVASISTLADLTLEFNQFSGDLPAELGNLINL 93 (809)
Q Consensus 14 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~L~~L~l~~n~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 93 (809)
..+|.++.+|+.++|..+ ++......|...+|+.+.+..+ +..|+.......+|+.++|..+-.. .-...|.+. +|
T Consensus 62 ~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c~l~~i~~~~~-l~~I~~~aF~~~~L~~i~lp~~~~~-i~~~~F~~~-~l 137 (379)
T 4h09_A 62 EANFNSCYNMTKVTVAST-VTSIGDGAFADTKLQSYTGMER-VKKFGDYVFQGTDLDDFEFPGATTE-IGNYIFYNS-SV 137 (379)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCCCCEEEECTT-CCEECTTTTTTCCCSEEECCTTCCE-ECTTTTTTC-CC
T ss_pred HHHhhCCCCCCEEEeCCc-ceEechhhhcCCCCceEECCce-eeEeccceeccCCcccccCCCcccc-ccccccccc-ee
Confidence 446889999999999754 7766677788877777776543 5566553333357888888765322 333344433 45
Q ss_pred CEEEccCCccCccCchhhhcccccceeeeecccc-----------------------------------cCcCchhhhcc
Q 043333 94 EKLHLNSNNFTGKLPESFANLTRLKHFRISDNHF-----------------------------------TGQIPDYIQNW 138 (809)
Q Consensus 94 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-----------------------------------~~~~p~~~~~l 138 (809)
+.+.+..+ ++.+....|..+.+|+.+.+..+.. .......+...
T Consensus 138 ~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~ 216 (379)
T 4h09_A 138 KRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYG 216 (379)
T ss_dssp CEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTC
T ss_pred eeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccc
Confidence 55555442 3323344555555555544433211 11223345566
Q ss_pred cccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccEEec
Q 043333 139 TKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDL 218 (809)
Q Consensus 139 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 218 (809)
.+|+.+.+..+ +.......|.++..|+.+.+..+ ++.+....|.++.+|+.+.+.. ++......+|.++++|+.+.+
T Consensus 217 ~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceeccccccccccccccccc
Confidence 77777777654 34345567777888888888764 6777777788888888888854 466666667888888888888
Q ss_pred cCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh-ccCccccccCC
Q 043333 219 SFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR-KRNKHIDLSYN 267 (809)
Q Consensus 219 s~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~L~Ls~N 267 (809)
.++.++.+....|.. .+|+.+.|..+ ++.+....|.. ..|+.+.+..+
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 888888777777777 78888888654 66555556654 56677776543
No 413
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.64 E-value=2.1e-07 Score=102.86 Aligned_cols=244 Identities=10% Similarity=0.077 Sum_probs=148.9
Q ss_pred CccCCCCCCCCEEEccCCCCCCCCCcccCCCC-ccccccccccCCCCc-hhhcCCccCcEEeecccccccCCCccccCCC
Q 043333 14 PPELTRLPFLQEIDLTRNYLNGTIPSEWASLP-LVNLPLWKQANGAIP-KAVASISTLADLTLEFNQFSGDLPAELGNLI 91 (809)
Q Consensus 14 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-L~~L~l~~n~~~~ip-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 91 (809)
..+|..+.+|+.+.+..+ ++......|.... |+.+.+..+ +..|+ .++..+.+|+.+.+.++ ++..-...|.. .
T Consensus 107 ~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~ 182 (394)
T 4gt6_A 107 RQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-T 182 (394)
T ss_dssp TTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-C
T ss_pred hhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-c
Confidence 345666777777776654 4434444555543 566666543 33333 35566677777777654 33233334443 4
Q ss_pred CCCEEEccCCccCccCchhhhcccccceeeeecc------------------------------------cccCcCchhh
Q 043333 92 NLEKLHLNSNNFTGKLPESFANLTRLKHFRISDN------------------------------------HFTGQIPDYI 135 (809)
Q Consensus 92 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N------------------------------------~l~~~~p~~~ 135 (809)
+|+.+.+..+-.. .....|.++.+|+......+ .+...-..+|
T Consensus 183 ~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF 261 (394)
T 4gt6_A 183 ALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAF 261 (394)
T ss_dssp CCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTT
T ss_pred ceeEEEECCcccc-cccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcCCcceEccccee
Confidence 5666666543222 33444555444444332221 1222234567
Q ss_pred hcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccccccCCCChhhhccccccE
Q 043333 136 QNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRV 215 (809)
Q Consensus 136 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 215 (809)
.++++|+.+.+..+... .....|.++.+|+.+.+. +.++.++...|.++.+|+.+.|..+ ++.....+|.++.+|+.
T Consensus 262 ~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~ 338 (394)
T 4gt6_A 262 DSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLER 338 (394)
T ss_dssp TTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred eecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCE
Confidence 88889999988766544 556788889999999986 5678888888999999999999754 66677788999999999
Q ss_pred EeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhhccCccccccCCc
Q 043333 216 LDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVRKRNKHIDLSYNN 268 (809)
Q Consensus 216 L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~~~l~~L~Ls~N~ 268 (809)
+.|..+ ++.+....|.. .+|+.+++.+|.... ........++.+.+..|.
T Consensus 339 i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 339 IAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp EEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC---------
T ss_pred EEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCCC
Confidence 999755 77777888887 899999998876431 111222445666665554
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.46 E-value=2.8e-08 Score=97.62 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=61.6
Q ss_pred hhcCCccCcEEeeccc-ccccC----CCccccCCCCCCEEEccCCccCcc----CchhhhcccccceeeeecccccCc--
Q 043333 62 AVASISTLADLTLEFN-QFSGD----LPAELGNLINLEKLHLNSNNFTGK----LPESFANLTRLKHFRISDNHFTGQ-- 130 (809)
Q Consensus 62 ~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~-- 130 (809)
.+...++|++|+|++| .+... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4445566666666666 55421 223344556666666666666532 223334445666666666666532
Q ss_pred --CchhhhcccccceEec--ccCcCCCCC----CccccCCCCCCEEeccCCCCC
Q 043333 131 --IPDYIQNWTKLEKLFI--EGSGLAGPI----PSGIASLVELTDLRISDLNGP 176 (809)
Q Consensus 131 --~p~~~~~l~~L~~L~L--~~N~l~~~~----p~~~~~l~~L~~L~l~~n~l~ 176 (809)
+...+...++|++|+| ++|.|+... ...+...++|++|++++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2334455556666666 566665322 233344466666666666553
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=4e-08 Score=96.45 Aligned_cols=118 Identities=19% Similarity=0.155 Sum_probs=87.4
Q ss_pred CCccccCCCCCCEEEccCC-ccCcc----CchhhhcccccceeeeecccccCc----CchhhhcccccceEecccCcCCC
Q 043333 83 LPAELGNLINLEKLHLNSN-NFTGK----LPESFANLTRLKHFRISDNHFTGQ----IPDYIQNWTKLEKLFIEGSGLAG 153 (809)
Q Consensus 83 ~p~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 153 (809)
+...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3456677888999999998 88742 334455668899999999998743 33445566889999999999875
Q ss_pred C----CCccccCCCCCCEEec--cCCCCCCCCCc----cccCCcCCceeeecccccc
Q 043333 154 P----IPSGIASLVELTDLRI--SDLNGPEGPFP----RLSNLKNMNYLILRSGNII 200 (809)
Q Consensus 154 ~----~p~~~~~l~~L~~L~l--~~n~l~~~~~~----~l~~l~~L~~L~Ls~N~l~ 200 (809)
. +...+...++|+.|++ ++|.+...... .+...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3 3456677788999999 78888765433 3556688999999998875
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=4.4e-08 Score=101.33 Aligned_cols=80 Identities=21% Similarity=0.338 Sum_probs=47.8
Q ss_pred cCCCCCCEEEccCCccCc--cCchhhhcccccceeeeecccccCcCchhhhccc--ccceEecccCcCCCCCCc------
Q 043333 88 GNLINLEKLHLNSNNFTG--KLPESFANLTRLKHFRISDNHFTGQIPDYIQNWT--KLEKLFIEGSGLAGPIPS------ 157 (809)
Q Consensus 88 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~------ 157 (809)
.++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 456677777777777775 3345566677777777777777643 2233443 677777777776654442
Q ss_pred -cccCCCCCCEEe
Q 043333 158 -GIASLVELTDLR 169 (809)
Q Consensus 158 -~~~~l~~L~~L~ 169 (809)
.+..+++|+.|+
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 234455555554
No 417
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.40 E-value=7e-07 Score=94.01 Aligned_cols=142 Identities=19% Similarity=0.171 Sum_probs=94.8
Q ss_pred CCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCC---ceEeEEeEEEeCCeEEEEEEcccC
Q 043333 579 PDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHP---NLVKLYGCCIEGNQLLLIYEYMEN 655 (809)
Q Consensus 579 ~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~~~~~~~~~~~lV~ey~~~ 655 (809)
..+.|+.|.++.||++...+|+.++||+...........|..|++.|+.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45779999999999999888999999997544333456789999999999865 467777763 35899999999
Q ss_pred Cchh--------h---hccCCCcc-----------------CCCCCHHHHHH--------------------HHHHHHHH
Q 043333 656 NSLA--------R---ALFGPEEH-----------------RLKLDWPTRHS--------------------ICIGLARG 687 (809)
Q Consensus 656 gsL~--------~---~L~~~~~~-----------------~~~l~~~~~~~--------------------i~~~ia~~ 687 (809)
+++. + .||..... ...-+|..... ....+.+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 8642 1 22322110 00124543211 01111222
Q ss_pred HHHHH----hCCCCCeEEcCCCCCCEEEcCCCceEEEecCCcc
Q 043333 688 LAYLH----EESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 688 L~yLH----~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 726 (809)
++.+. ...++.++|+|+.+.||+++. +.+.|+|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 33332 233567999999999999998 45889999 654
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.37 E-value=2.6e-06 Score=93.32 Aligned_cols=146 Identities=14% Similarity=0.097 Sum_probs=111.8
Q ss_pred cCchhhhcccccceeeeecccccCcCchhhhcccccceEecccCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccC
Q 043333 106 KLPESFANLTRLKHFRISDNHFTGQIPDYIQNWTKLEKLFIEGSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSN 185 (809)
Q Consensus 106 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 185 (809)
.....+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++......|.++.+|+.+.+.. .+..++...|.+
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~ 284 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSG 284 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTT
T ss_pred Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceecccccccc
Confidence 33445666778888888665 44355667888899999998766 5545567888888999998865 477778888999
Q ss_pred CcCCceeeeccccccCCCChhhhccccccEEeccCCCCCCCCCCCCCC-CCccEEEeeCccCCCCCChhhhh
Q 043333 186 LKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSFNKLSGVIPSNFSG-SGLTYMYLTGNLLTGPVPDWIVR 256 (809)
Q Consensus 186 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~ 256 (809)
+.+|+.+.+.++.++.....+|.++.+|+.++|..+ ++.+....|.. .+|+.+.+..+ ++.+....|..
T Consensus 285 c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~ 354 (379)
T 4h09_A 285 CSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEG 354 (379)
T ss_dssp CTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred ccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhC
Confidence 999999999888888888888999999999999755 77777788877 88998888655 55444555543
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=1e-07 Score=98.49 Aligned_cols=81 Identities=17% Similarity=0.170 Sum_probs=49.1
Q ss_pred hcccccceEecccCcCCC--CCCccccCCCCCCEEeccCCCCCCC-CCccccCCcCCceeeeccccccCCCC-------h
Q 043333 136 QNWTKLEKLFIEGSGLAG--PIPSGIASLVELTDLRISDLNGPEG-PFPRLSNLKNMNYLILRSGNIIGEMP-------E 205 (809)
Q Consensus 136 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~p-------~ 205 (809)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++..+ ....+..+ +|++|+|++|.+.+.+| .
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccCcchhHHHH
Confidence 345666666666666665 3344555666666666666666555 12233334 77777777777776655 2
Q ss_pred hhhccccccEEe
Q 043333 206 YLGQMIGLRVLD 217 (809)
Q Consensus 206 ~~~~l~~L~~L~ 217 (809)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 366777777765
No 420
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.32 E-value=1.3e-06 Score=93.47 Aligned_cols=185 Identities=15% Similarity=0.146 Sum_probs=118.7
Q ss_pred CCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCC----CceEeEEeEEEeCCeEEEEEE
Q 043333 576 NFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQH----PNLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 576 ~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H----~nIv~l~~~~~~~~~~~lV~e 651 (809)
.....+.++.|....||+. |+.+++|+.... .....+.+|.+++..+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5566788999999999987 566788876432 123457889998888866 123455554 45689999
Q ss_pred cccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCC-----------------------------------
Q 043333 652 YMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESR----------------------------------- 696 (809)
Q Consensus 652 y~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~----------------------------------- 696 (809)
|+++.++.+... ..++...+..++.++++.|..||+...
T Consensus 108 ~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 108 YIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 999988864321 134556667777888888888884321
Q ss_pred -------------------------CCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCcceeccccccccccchhhh
Q 043333 697 -------------------------LKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYA 751 (809)
Q Consensus 697 -------------------------~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~ 751 (809)
+.++|+|++|.||+++.+..+.|+||+.+........ .............||..
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~D-l~~~~~~~~~~~~~~~~ 260 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDND-FLCLLDCSTDDFGKEFG 260 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGG-GHHHHSCCTTSCCHHHH
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHH-HHHHHHhcccccCHHHH
Confidence 2459999999999999976679999999865432111 11111111112333332
Q ss_pred c----c-CC-----CCchHHHHHHHHHHHHHHcCCC
Q 043333 752 M----R-GY-----LTDKADVYSFGIVALEIVSGRS 777 (809)
Q Consensus 752 ~----~-~~-----~~~ksDVwSlGvil~elltGk~ 777 (809)
. . .. .....+.|..-..+.+++.|-.
T Consensus 261 ~~~l~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 296 (320)
T 3r70_A 261 RKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYE 296 (320)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHTHHHHHHHSSCT
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 1 1 11 1245677866666888988853
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.17 E-value=6.5e-06 Score=87.42 Aligned_cols=137 Identities=18% Similarity=0.169 Sum_probs=92.1
Q ss_pred CCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCC---ceEeEEeEEE-eCCeEEEEEEcccC
Q 043333 580 DNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHP---NLVKLYGCCI-EGNQLLLIYEYMEN 655 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~~~~~-~~~~~~lV~ey~~~ 655 (809)
.+.++.|....||+. |..++||+-.. ......+.+|.++|..+.+. .+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888888899987 45677887432 22345688999999999753 3556777765 34557899999999
Q ss_pred CchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 043333 656 NSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEE----------------------------------------- 694 (809)
Q Consensus 656 gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~----------------------------------------- 694 (809)
.++.+.... .++...+..++.++++.|..||+.
T Consensus 98 ~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 887653210 123334444444444444444432
Q ss_pred ----------------CCCCeEEcCCCCCCEEEcC---CCce-EEEecCCcccc
Q 043333 695 ----------------SRLKIVHRDIKATNVLLDK---DLNP-KISDFGLAKLD 728 (809)
Q Consensus 695 ----------------~~~~iiH~Dlkp~NILl~~---~~~~-kl~DfGla~~~ 728 (809)
.++.++|+|++|.||+++. ++.+ .|+||+.+...
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2346799999999999987 4554 89999988654
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.17 E-value=5.9e-06 Score=85.83 Aligned_cols=135 Identities=16% Similarity=0.116 Sum_probs=93.4
Q ss_pred eeccCCCc-cEEEeEee-CCeEEEEEEecccCcccchhHHHHHHHHhhcC-CCceEeEEeEEEeCCeEEEEEEcccCCch
Q 043333 582 KIGEGGFG-PVYKGLLA-DGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYEYMENNSL 658 (809)
Q Consensus 582 ~LG~G~fG-~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~lV~ey~~~gsL 658 (809)
.+..|..| .||+.... ++..++||+-... ....+.+|.+.|+.+. +--+.++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45555555 58987654 4567888886432 2356778999888874 33466889999999999999999999877
Q ss_pred hhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------------
Q 043333 659 ARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEE-------------------------------------------- 694 (809)
Q Consensus 659 ~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------------- 694 (809)
.+..... ......++.+++..|.-||..
T Consensus 108 ~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 6543110 112234555555566666631
Q ss_pred -----------CCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 695 -----------SRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 695 -----------~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
.++.++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112478999999999999887778999998764
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.06 E-value=8.2e-06 Score=88.55 Aligned_cols=81 Identities=6% Similarity=0.030 Sum_probs=56.4
Q ss_pred CCee-ccCCCccEEEeEee-------CCeEEEEEEecccC---cccchhHHHHHHHHhhcC-C--CceEeEEeEEEeC--
Q 043333 580 DNKI-GEGGFGPVYKGLLA-------DGKVIAVKQLSSKS---KQGNREFVNEIGMISALQ-H--PNLVKLYGCCIEG-- 643 (809)
Q Consensus 580 ~~~L-G~G~fG~Vy~~~~~-------~g~~vAVK~~~~~~---~~~~~~f~~Ei~~l~~l~-H--~nIv~l~~~~~~~-- 643 (809)
.+.| +.|....+|+.... +++.+++|+..... ......+.+|+++++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88888999988754 26678888765432 112356788999888885 3 2466788887655
Q ss_pred -CeEEEEEEcccCCchhh
Q 043333 644 -NQLLLIYEYMENNSLAR 660 (809)
Q Consensus 644 -~~~~lV~ey~~~gsL~~ 660 (809)
+..++||||+++..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 34689999999876653
No 424
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.05 E-value=1.5e-05 Score=86.71 Aligned_cols=144 Identities=14% Similarity=0.143 Sum_probs=91.2
Q ss_pred CCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCc--eEeEEeEEEeC-CeEEEEEEcccC
Q 043333 579 PDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPN--LVKLYGCCIEG-NQLLLIYEYMEN 655 (809)
Q Consensus 579 ~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~~~~~~~-~~~~lV~ey~~~ 655 (809)
..+.++.|....+|+... +|+.+++|+.... ..+..|+.++..+.... +.++++++.+. +..++||||+++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 456789999999998875 5788889987432 35788999998886544 45677777764 568999999998
Q ss_pred Cchhhh------------------ccCCCcc----------------------------CCCCCHHHH------HHHHHH
Q 043333 656 NSLARA------------------LFGPEEH----------------------------RLKLDWPTR------HSICIG 683 (809)
Q Consensus 656 gsL~~~------------------L~~~~~~----------------------------~~~l~~~~~------~~i~~~ 683 (809)
.++.+. ||..... .....|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 766421 1111000 000012111 011112
Q ss_pred HHHHHHHHHhC-CCCCeEEcCCCCCCEEEcCCCceEEEecCCcccc
Q 043333 684 LARGLAYLHEE-SRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 728 (809)
Q Consensus 684 ia~~L~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 728 (809)
+...++++... ..+.++|+|+.+.||+++++..+.|+||+.+...
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 22223333221 1146899999999999988777889999988653
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.82 E-value=3e-05 Score=83.28 Aligned_cols=142 Identities=15% Similarity=0.221 Sum_probs=80.7
Q ss_pred CeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCC--CceEeEEe------EEEeCCeEEEEEEc
Q 043333 581 NKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQH--PNLVKLYG------CCIEGNQLLLIYEY 652 (809)
Q Consensus 581 ~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H--~nIv~l~~------~~~~~~~~~lV~ey 652 (809)
+.|+.|..+.||+....+| .+++|+.... ..++..|.+++..+.. -.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4466677899999876555 4889988642 2333445555554431 12233332 22346778999999
Q ss_pred ccCCchh--------------hhccCCCc----c------CCCCCHHHHH------------------------------
Q 043333 653 MENNSLA--------------RALFGPEE----H------RLKLDWPTRH------------------------------ 678 (809)
Q Consensus 653 ~~~gsL~--------------~~L~~~~~----~------~~~l~~~~~~------------------------------ 678 (809)
+++..+. ..+|.... . ...-.|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 11221100 0 0112343211
Q ss_pred -HHHHHHHHHHHHHHh----------CCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 679 -SICIGLARGLAYLHE----------ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 679 -~i~~~ia~~L~yLH~----------~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
.+...+..++++|++ ..+..++|||+++.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 111223446667763 1245799999999999998888999999998754
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.73 E-value=8.9e-05 Score=81.64 Aligned_cols=75 Identities=13% Similarity=0.183 Sum_probs=49.7
Q ss_pred CCeeccCCCccEEEeEee-CCeEEEEEEecccCc-------ccchhHHHHHHHHhhcCC--Cc-eEeEEeEEEeCCeEEE
Q 043333 580 DNKIGEGGFGPVYKGLLA-DGKVIAVKQLSSKSK-------QGNREFVNEIGMISALQH--PN-LVKLYGCCIEGNQLLL 648 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-------~~~~~f~~Ei~~l~~l~H--~n-Iv~l~~~~~~~~~~~l 648 (809)
.+.+|.|..+.||++... +++.++||....... .....+..|.+++..+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 467899998653221 123456789888887742 33 3455543 4455689
Q ss_pred EEEcccCC
Q 043333 649 IYEYMENN 656 (809)
Q Consensus 649 V~ey~~~g 656 (809)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.73 E-value=1.7e-05 Score=76.11 Aligned_cols=84 Identities=13% Similarity=0.100 Sum_probs=45.3
Q ss_pred ccCcEEeecccccccCCCccccCCCCCCEEEccCCc-cCccCchhhhcc----cccceeeeeccc-ccCcCchhhhcccc
Q 043333 67 STLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNN-FTGKLPESFANL----TRLKHFRISDNH-FTGQIPDYIQNWTK 140 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 140 (809)
-+|+.|||+++.++..--..+..+++|++|+|++|. |+..--..++.+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356667777666654434445666666666666663 553222333332 246666666653 54332333455555
Q ss_pred cceEecccCc
Q 043333 141 LEKLFIEGSG 150 (809)
Q Consensus 141 L~~L~L~~N~ 150 (809)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666655553
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.65 E-value=0.00016 Score=75.73 Aligned_cols=79 Identities=20% Similarity=0.196 Sum_probs=57.3
Q ss_pred cCCCCCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcC-CC--ceEeEEeEEEeCCeEEEEEE
Q 043333 575 NNFAPDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQ-HP--NLVKLYGCCIEGNQLLLIYE 651 (809)
Q Consensus 575 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~-H~--nIv~l~~~~~~~~~~~lV~e 651 (809)
......+.+|.|..+.||+.+..||+.|.||+...........|..|++.|+.+. .. -+.+.+++ +. -++|||
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e 90 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAME 90 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEE
Confidence 3455677899999999999999999999999876554444456788999988874 22 23445543 22 368999
Q ss_pred cccCCc
Q 043333 652 YMENNS 657 (809)
Q Consensus 652 y~~~gs 657 (809)
|++.+.
T Consensus 91 ~l~~~~ 96 (288)
T 3f7w_A 91 WVDERP 96 (288)
T ss_dssp CCCCCC
T ss_pred eecccC
Confidence 988764
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.63 E-value=2e-05 Score=75.61 Aligned_cols=83 Identities=12% Similarity=0.169 Sum_probs=48.7
Q ss_pred CCCCEEEccCCccCccCchhhhcccccceeeeeccc-ccCcCchhhhcc----cccceEecccCc-CCCCCCccccCCCC
Q 043333 91 INLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNH-FTGQIPDYIQNW----TKLEKLFIEGSG-LAGPIPSGIASLVE 164 (809)
Q Consensus 91 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 164 (809)
.+|+.|||+++.|+..--..+.++++|+.|+|++|. ++..--..++.+ ++|++|+|++|. ++...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888888775555566777888888888885 553323334443 357777777663 55322223334444
Q ss_pred CCEEeccCC
Q 043333 165 LTDLRISDL 173 (809)
Q Consensus 165 L~~L~l~~n 173 (809)
|+.|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 444444443
No 430
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.52 E-value=0.00038 Score=73.70 Aligned_cols=140 Identities=14% Similarity=0.127 Sum_probs=92.4
Q ss_pred CCCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcC---CCceEeEEeEEEeCCeEEEEEEcccC
Q 043333 579 PDNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQ---HPNLVKLYGCCIEGNQLLLIYEYMEN 655 (809)
Q Consensus 579 ~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~---H~nIv~l~~~~~~~~~~~lV~ey~~~ 655 (809)
..+.|+.|....+|+... ++..++||+.... ....|..|.+.|+.+. ...+.++++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 356799999999999875 4567788886532 2456788988888874 35677889988888889999999998
Q ss_pred Cchh-----------hhccCCCc---c---------------CCCCCHHHHH---HHHH----------------HHH-H
Q 043333 656 NSLA-----------RALFGPEE---H---------------RLKLDWPTRH---SICI----------------GLA-R 686 (809)
Q Consensus 656 gsL~-----------~~L~~~~~---~---------------~~~l~~~~~~---~i~~----------------~ia-~ 686 (809)
..+. ..||.... . ...-+|.... ++.. .+. .
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7642 12232211 0 0012565432 1111 111 1
Q ss_pred HHHHHHh-CCCCCeEEcCCCCCCEEEcCCCceEEEecC
Q 043333 687 GLAYLHE-ESRLKIVHRDIKATNVLLDKDLNPKISDFG 723 (809)
Q Consensus 687 ~L~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 723 (809)
....|.. ..++.++|+|+.+.|++++.++ +.|.|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1223322 2346799999999999999887 8999984
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.43 E-value=9.4e-05 Score=82.15 Aligned_cols=79 Identities=11% Similarity=0.115 Sum_probs=49.7
Q ss_pred CCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCcceecccc-ccccccchhhhccC---CCCchHHHHHHHHHHHH
Q 043333 696 RLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIA-GTFGYMAPEYAMRG---YLTDKADVYSFGIVALE 771 (809)
Q Consensus 696 ~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~-gt~~y~aPE~~~~~---~~~~ksDVwSlGvil~e 771 (809)
+..++|||++|.|||++.++ ++|+||+.+....... ....... -...|++|+..... ......++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~-Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF-DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH-HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH-HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 45799999999999998876 9999999887532110 0000000 01346777665421 11224566688888888
Q ss_pred HHcCC
Q 043333 772 IVSGR 776 (809)
Q Consensus 772 lltGk 776 (809)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.31 E-value=6.5e-05 Score=73.48 Aligned_cols=64 Identities=19% Similarity=0.249 Sum_probs=27.9
Q ss_pred CCccCcEEeeccc-cccc----CCCccccCCCCCCEEEccCCccCcc----Cchhhhcccccceeeeeccccc
Q 043333 65 SISTLADLTLEFN-QFSG----DLPAELGNLINLEKLHLNSNNFTGK----LPESFANLTRLKHFRISDNHFT 128 (809)
Q Consensus 65 ~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 128 (809)
+-+.|++|+|++| +|.. .+...+...+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|.
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3345555555553 4432 1222344444555555555555521 1222223344444444444444
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.30 E-value=5.1e-05 Score=74.23 Aligned_cols=94 Identities=16% Similarity=0.163 Sum_probs=64.1
Q ss_pred CchhhcCCccCcEEeecccccccC----CCccccCCCCCCEEEccCCccCccC----chhhhcccccceeeeeccc---c
Q 043333 59 IPKAVASISTLADLTLEFNQFSGD----LPAELGNLINLEKLHLNSNNFTGKL----PESFANLTRLKHFRISDNH---F 127 (809)
Q Consensus 59 ip~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~---l 127 (809)
|-.++..-+.|+.|+|++|+|... +...+...+.|++|+|+.|+|+... .+.+..-+.|++|+|++|. +
T Consensus 62 la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~i 141 (197)
T 1pgv_A 62 LIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVL 141 (197)
T ss_dssp HHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCC
T ss_pred HHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCc
Confidence 445666678899999999998842 3334556788999999999998432 2334445679999998763 3
Q ss_pred cC----cCchhhhcccccceEecccCcCC
Q 043333 128 TG----QIPDYIQNWTKLEKLFIEGSGLA 152 (809)
Q Consensus 128 ~~----~~p~~~~~l~~L~~L~L~~N~l~ 152 (809)
.. .+...+..-++|+.|+++.|.+.
T Consensus 142 g~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 142 GNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp CHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred CHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 32 13344555678888888776643
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.17 E-value=0.0015 Score=69.37 Aligned_cols=160 Identities=14% Similarity=0.127 Sum_probs=90.0
Q ss_pred ccHHHHHHHhcCCCC-----CCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCc--eEeEE
Q 043333 565 FTLRQIKAATNNFAP-----DNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPN--LVKLY 637 (809)
Q Consensus 565 ~~~~~l~~~~~~f~~-----~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~ 637 (809)
++.+++...-..|.. .+.|+.|....+|+....+| .+++|+.... ....++..|++++..+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 455566666556654 23466788889999887666 5678887642 12345667777777764222 23333
Q ss_pred eE------EEeCCeEEEEEEcccCCchhh--------------hccCC----CccC----CCCCHHHHHH----------
Q 043333 638 GC------CIEGNQLLLIYEYMENNSLAR--------------ALFGP----EEHR----LKLDWPTRHS---------- 679 (809)
Q Consensus 638 ~~------~~~~~~~~lV~ey~~~gsL~~--------------~L~~~----~~~~----~~l~~~~~~~---------- 679 (809)
.. ....+..++|++|+++..+.. .+|.. .... ....|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 223466789999999865321 12211 0000 0012433111
Q ss_pred --HHHHHHHHHHHHHhC----CCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 680 --ICIGLARGLAYLHEE----SRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 680 --i~~~ia~~L~yLH~~----~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+...+...++++++. .+..++|+|+.+.||+++.+..+.|+||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244456666532 234789999999999999876668999998753
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.81 E-value=0.0043 Score=66.17 Aligned_cols=143 Identities=17% Similarity=0.164 Sum_probs=72.8
Q ss_pred CeeccCCCcc-EEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCC--ceEeEEeEEEeCCeEEEEEEcccCCc
Q 043333 581 NKIGEGGFGP-VYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHP--NLVKLYGCCIEGNQLLLIYEYMENNS 657 (809)
Q Consensus 581 ~~LG~G~fG~-Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~--nIv~l~~~~~~~~~~~lV~ey~~~gs 657 (809)
+.|+.|.... +|+....+|+.+++|....... .++..|++++..+... .+.+++.+..+.+ ++|||++++..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4465554443 6676554466677776443221 3445677777666422 2456666643333 68999997766
Q ss_pred hhhhc---------------------cCCCccC-CCCCHHHHH--------------------HHHHHHHHHHHHHH---
Q 043333 658 LARAL---------------------FGPEEHR-LKLDWPTRH--------------------SICIGLARGLAYLH--- 692 (809)
Q Consensus 658 L~~~L---------------------~~~~~~~-~~l~~~~~~--------------------~i~~~ia~~L~yLH--- 692 (809)
+.+++ |...... ...+..... .....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 54333 1111000 111111100 00011222233331
Q ss_pred hCCCCCeEEcCCCCCCEEEcCC----CceEEEecCCcccc
Q 043333 693 EESRLKIVHRDIKATNVLLDKD----LNPKISDFGLAKLD 728 (809)
Q Consensus 693 ~~~~~~iiH~Dlkp~NILl~~~----~~~kl~DfGla~~~ 728 (809)
...+..++|||+.+.||+++.+ ..+.|+||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1224578999999999999875 67899999988653
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.75 E-value=0.0018 Score=71.80 Aligned_cols=73 Identities=19% Similarity=0.255 Sum_probs=49.3
Q ss_pred CCeeccCCCccEEEeEeeC--------CeEEEEEEecccCcccchhHHHHHHHHhhcCCCce-EeEEeEEEeCCeEEEEE
Q 043333 580 DNKIGEGGFGPVYKGLLAD--------GKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNL-VKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~~--------g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~lV~ 650 (809)
.+.|+.|....||+....+ ++.+++|+.... .....+..|..++..+...++ .++++.+. + .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 4568888889999988653 467889987432 111456689888888853344 46666543 3 3899
Q ss_pred EcccCCch
Q 043333 651 EYMENNSL 658 (809)
Q Consensus 651 ey~~~gsL 658 (809)
||+++.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.73 E-value=0.0057 Score=64.94 Aligned_cols=143 Identities=13% Similarity=0.119 Sum_probs=82.4
Q ss_pred CeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCc--eEeEEeE-----EEeCCeEEEEEEcc
Q 043333 581 NKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPN--LVKLYGC-----CIEGNQLLLIYEYM 653 (809)
Q Consensus 581 ~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~~~-----~~~~~~~~lV~ey~ 653 (809)
..++ |....||+....+|+.+++|...... .....+..|.+++..+.... +++++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 77889999877677778999986432 12345667888777764222 3444432 22355678899999
Q ss_pred cCCchhh--------------hccCC----C-ccCCCCCHHHH----HHH---------------HHHHHHHHHHHHh--
Q 043333 654 ENNSLAR--------------ALFGP----E-EHRLKLDWPTR----HSI---------------CIGLARGLAYLHE-- 693 (809)
Q Consensus 654 ~~gsL~~--------------~L~~~----~-~~~~~l~~~~~----~~i---------------~~~ia~~L~yLH~-- 693 (809)
++..+.. .+|.. . ......++... ..+ ...+...++.+.+
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8855421 01210 0 01112232211 000 1111222333322
Q ss_pred --CCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 694 --ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 694 --~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
..+..++|||+++.||+++ + .+.|+||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1234678999999999999 4 899999988764
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.71 E-value=0.0037 Score=65.68 Aligned_cols=139 Identities=12% Similarity=0.148 Sum_probs=75.7
Q ss_pred CCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCce-EeEEeEEEeCCeEEEEEEcc-cCCc
Q 043333 580 DNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNL-VKLYGCCIEGNQLLLIYEYM-ENNS 657 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~lV~ey~-~~gs 657 (809)
.+.|+.|....+|+. +.+++|+....... .....+|+++++.+....+ .+++++ +.+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 678999999999998 44778877543221 2233467777777643233 355544 343457899999 5544
Q ss_pred hhh------------------hccCCCc-cCCCCC-HHHHHHHHH--------------HHHHHH----HHHHh-CCCCC
Q 043333 658 LAR------------------ALFGPEE-HRLKLD-WPTRHSICI--------------GLARGL----AYLHE-ESRLK 698 (809)
Q Consensus 658 L~~------------------~L~~~~~-~~~~l~-~~~~~~i~~--------------~ia~~L----~yLH~-~~~~~ 698 (809)
+.. .+|.... .....+ +.....+.. .+...+ +.+.. ..+..
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 421 1122111 000011 111111110 011111 11211 23345
Q ss_pred eEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 699 IVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 699 iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
++|+|+.+.||+ ..++.+.++||..+..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 899999999999 6667889999998764
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.66 E-value=0.0093 Score=66.56 Aligned_cols=74 Identities=19% Similarity=0.117 Sum_probs=47.8
Q ss_pred CCeeccCCCccEEEeEeeC-CeEEEEEEecccCcccchhHHHHHHHHhhcCCCce-EeEEeEEEeCCeEEEEEEcccCCc
Q 043333 580 DNKIGEGGFGPVYKGLLAD-GKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNL-VKLYGCCIEGNQLLLIYEYMENNS 657 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~~-g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~lV~ey~~~gs 657 (809)
.+.|+.|-...+|+....+ +..+++|+....... .-.-.+|..++..+...++ .++++++ .+. +|+||+++.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~--~~G--~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF--TNG--RIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE--TTE--EEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe--CCe--EEEEeeCCcc
Confidence 4568888889999988764 477888887433211 1112578888888865555 4677666 232 5999998755
Q ss_pred h
Q 043333 658 L 658 (809)
Q Consensus 658 L 658 (809)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.48 E-value=0.0053 Score=66.71 Aligned_cols=143 Identities=18% Similarity=0.226 Sum_probs=83.1
Q ss_pred CCeeccCCCccEEEeEee--------CCeEEEEEEecccCcccchhHHHHHHHHhhcCCCc-eEeEEeEEEeCCeEEEEE
Q 043333 580 DNKIGEGGFGPVYKGLLA--------DGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPN-LVKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~--------~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~n-Iv~l~~~~~~~~~~~lV~ 650 (809)
.+.+..|-...+|+.... +++.+++|+.... ........+|.++++.+.-.. ..++++++. + .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEE
Confidence 456777888899998764 2467888886332 223455668988888775222 346666553 3 2899
Q ss_pred EcccCCchhh-----------------hccCCCc-cCCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 043333 651 EYMENNSLAR-----------------ALFGPEE-HRLKLD--WPTRHSICIGLAR-------------------GLAYL 691 (809)
Q Consensus 651 ey~~~gsL~~-----------------~L~~~~~-~~~~l~--~~~~~~i~~~ia~-------------------~L~yL 691 (809)
||+++..|.. .||.... ...+.. |.+..++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999865531 1232211 111122 4455555443321 23333
Q ss_pred H----h-CCCCCeEEcCCCCCCEEEcCC----CceEEEecCCccc
Q 043333 692 H----E-ESRLKIVHRDIKATNVLLDKD----LNPKISDFGLAKL 727 (809)
Q Consensus 692 H----~-~~~~~iiH~Dlkp~NILl~~~----~~~kl~DfGla~~ 727 (809)
. . ..+..++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 2 233468899999999999876 7899999998763
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.18 E-value=0.0061 Score=55.41 Aligned_cols=55 Identities=20% Similarity=0.319 Sum_probs=24.9
Q ss_pred EEeecccccc-cCCCccccCCCCCCEEEccCCccCccCchhhhcccccceeeeecccc
Q 043333 71 DLTLEFNQFS-GDLPAELGNLINLEKLHLNSNNFTGKLPESFANLTRLKHFRISDNHF 127 (809)
Q Consensus 71 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 127 (809)
.++.++++|+ ..+|..+. .+|++|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 22332221 2355555555555543344444445555555554443
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.08 E-value=0.0049 Score=56.03 Aligned_cols=38 Identities=26% Similarity=0.328 Sum_probs=33.6
Q ss_pred ccCcEEeecccccccCCCccccCCCCCCEEEccCCccC
Q 043333 67 STLADLTLEFNQFSGDLPAELGNLINLEKLHLNSNNFT 104 (809)
Q Consensus 67 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 104 (809)
++|+.|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 31 ~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 31 VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 46899999999999666678899999999999999886
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.05 E-value=0.0077 Score=65.26 Aligned_cols=74 Identities=11% Similarity=0.114 Sum_probs=43.5
Q ss_pred CCeeccCCCccEEEeEeeC---------CeEEEEEEecccCcccchhHHHHHHHHhhcCCCc-eEeEEeEEEeCCeEEEE
Q 043333 580 DNKIGEGGFGPVYKGLLAD---------GKVIAVKQLSSKSKQGNREFVNEIGMISALQHPN-LVKLYGCCIEGNQLLLI 649 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~~---------g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~n-Iv~l~~~~~~~~~~~lV 649 (809)
.+.++.|....+|+....+ ++.+++|+....... ......|.+++..+.... ..++++.. .+ ++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC--cEE
Confidence 3457778888999987654 267888886543221 123357888888775333 33566543 22 689
Q ss_pred EEcccCCch
Q 043333 650 YEYMENNSL 658 (809)
Q Consensus 650 ~ey~~~gsL 658 (809)
|||+++..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987544
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.76 E-value=0.035 Score=59.32 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=28.0
Q ss_pred CCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 696 RLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 696 ~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
+..++|+|+.+.||++++++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34789999999999999888899999987764
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.18 E-value=0.037 Score=60.37 Aligned_cols=143 Identities=18% Similarity=0.218 Sum_probs=81.9
Q ss_pred CCeeccCCCccEEEeEeeC--------CeEEEEEEecccCcc------------------cchhHHHHHHHHhhcCCCc-
Q 043333 580 DNKIGEGGFGPVYKGLLAD--------GKVIAVKQLSSKSKQ------------------GNREFVNEIGMISALQHPN- 632 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~~--------g~~vAVK~~~~~~~~------------------~~~~f~~Ei~~l~~l~H~n- 632 (809)
.+.|..|-...+|+....+ ++.|.+++.-..... ..+....|.++++.+...+
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3456667778899887653 357888876432211 0112235888888885333
Q ss_pred eEeEEeEEEeCCeEEEEEEcccCCchhh-----------------hccCCC-ccCCCCC--HHHHHHHHHHHH-------
Q 043333 633 LVKLYGCCIEGNQLLLIYEYMENNSLAR-----------------ALFGPE-EHRLKLD--WPTRHSICIGLA------- 685 (809)
Q Consensus 633 Iv~l~~~~~~~~~~~lV~ey~~~gsL~~-----------------~L~~~~-~~~~~l~--~~~~~~i~~~ia------- 685 (809)
..++++++. +. +|+||+++-+|.. .+|... ....... |....++..++.
T Consensus 137 ~Pkl~~~~~--~G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFP--QG--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEET--TE--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeC--CC--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 446776653 32 8999999755421 112221 1111222 234333333221
Q ss_pred ---------------HHH----HHHHhC-CCCCeEEcCCCCCCEEEcCC------CceEEEecCCcc
Q 043333 686 ---------------RGL----AYLHEE-SRLKIVHRDIKATNVLLDKD------LNPKISDFGLAK 726 (809)
Q Consensus 686 ---------------~~L----~yLH~~-~~~~iiH~Dlkp~NILl~~~------~~~kl~DfGla~ 726 (809)
.-+ ++|... .+..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223222 33467899999999999887 789999999875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.61 E-value=0.091 Score=57.79 Aligned_cols=142 Identities=13% Similarity=0.134 Sum_probs=84.3
Q ss_pred CCeeccCCCccEEEeEeeC--------CeEEEEEEecccCcccchhHHHHHHHHhhcCCCce-EeEEeEEEeCCeEEEEE
Q 043333 580 DNKIGEGGFGPVYKGLLAD--------GKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNL-VKLYGCCIEGNQLLLIY 650 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~~--------g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~lV~ 650 (809)
.+.+..|-...+|+....+ ++.+++|+....... .-+-.+|.++++.+.-..+ .++++.+ .+ ++|+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--PE--GRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEE
Confidence 4567778888999988653 577888886443221 2233578888877753233 4555533 22 6899
Q ss_pred EcccCCchhh-----------------hccCCCc---------cCCCCCHHHHHHHHHHH-------------------H
Q 043333 651 EYMENNSLAR-----------------ALFGPEE---------HRLKLDWPTRHSICIGL-------------------A 685 (809)
Q Consensus 651 ey~~~gsL~~-----------------~L~~~~~---------~~~~l~~~~~~~i~~~i-------------------a 685 (809)
||+++..|.. .||.... ...+.-|.+..++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999866421 1122111 11222344444443322 2
Q ss_pred HHHHHHHh---------------------CCCCCeEEcCCCCCCEEEcCCCceEEEecCCccc
Q 043333 686 RGLAYLHE---------------------ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 727 (809)
Q Consensus 686 ~~L~yLH~---------------------~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 727 (809)
..+++|.+ ..+..++|+|+.+.||+ +.++.+.++||..+..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22333321 12346789999999999 8888999999998863
No 447
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=87.30 E-value=1.1 Score=43.96 Aligned_cols=103 Identities=15% Similarity=0.100 Sum_probs=66.1
Q ss_pred CCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEcCCCCCCEEEcCCCceEEEecCCccccCCCCc
Q 043333 655 NNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHE-ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 733 (809)
Q Consensus 655 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 733 (809)
.-||.+.|. ....++++.+++.++.|.+.+|.-+-. .. + ..+=+.|..|++..+|.+...+ ..+.
T Consensus 32 ~vSL~eIL~---~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~--~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------- 97 (229)
T 2yle_A 32 ALSLEEILR---LYNQPINEEQAWAVCYQCCGSLRAAARRRQ--P-RHRVRSAAQIRVWRDGAVTLAP-AADD------- 97 (229)
T ss_dssp EEEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHTTC--C-CCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred cccHHHHHH---HcCCCcCHHHHHHHHHHHHHHHHhhhhccc--C-CceecCCcceEEecCCceeccc-cccc-------
Confidence 347888883 356789999999999999999877621 11 1 1233457889999999887764 1110
Q ss_pred ceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCC
Q 043333 734 HISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSN 778 (809)
Q Consensus 734 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P 778 (809)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0112467888753 3457889999999999987754433
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=86.52 E-value=0.63 Score=50.66 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=25.1
Q ss_pred CeEEcCCCCCCEEE------cCCCceEEEecCCccc
Q 043333 698 KIVHRDIKATNVLL------DKDLNPKISDFGLAKL 727 (809)
Q Consensus 698 ~iiH~Dlkp~NILl------~~~~~~kl~DfGla~~ 727 (809)
.++|+|+.+.|||+ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 45799999999999 4567799999998863
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=80.87 E-value=1.3 Score=31.26 Aligned_cols=26 Identities=19% Similarity=0.367 Sum_probs=11.1
Q ss_pred eeehhHHHHHHHHHH-HHHHHhhhccc
Q 043333 520 MVVGIVAAAAFILIL-IVSILWWKGCF 545 (809)
Q Consensus 520 ~i~~~~~~~~~~~~l-~~~~~~~~~~~ 545 (809)
++.++++++++++++ ++.+++|++++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 344444444443333 33344454443
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=80.76 E-value=0.65 Score=32.73 Aligned_cols=25 Identities=16% Similarity=0.267 Sum_probs=10.9
Q ss_pred eeehhHHHHHHHHHH-HHHHHhhhcc
Q 043333 520 MVVGIVAAAAFILIL-IVSILWWKGC 544 (809)
Q Consensus 520 ~i~~~~~~~~~~~~l-~~~~~~~~~~ 544 (809)
.+++.++++++++++ ++.++|+||+
T Consensus 13 ~Ia~~vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 13 SIISAVVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhheehh
Confidence 355555554433333 3334444443
No 451
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=80.65 E-value=1.1 Score=30.67 Aligned_cols=16 Identities=13% Similarity=0.150 Sum_probs=9.4
Q ss_pred ccceeehhHHHHHHHH
Q 043333 517 NVGMVVGIVAAAAFIL 532 (809)
Q Consensus 517 ~~~~i~~~~~~~~~~~ 532 (809)
..+.++|+++++++.+
T Consensus 9 s~GaIAGiVvG~v~gv 24 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGA 24 (38)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CCCceeeeehHHHHHH
Confidence 3466677776665433
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.78 E-value=0.29 Score=54.52 Aligned_cols=61 Identities=10% Similarity=0.096 Sum_probs=18.6
Q ss_pred CCCeeccCCCccEEEeEeeC-CeEEEE------EEeccc--CcccchhHHHHHHHHhhcCCCceEeEEeEEEe
Q 043333 579 PDNKIGEGGFGPVYKGLLAD-GKVIAV------KQLSSK--SKQGNREFVNEIGMISALQHPNLVKLYGCCIE 642 (809)
Q Consensus 579 ~~~~LG~G~fG~Vy~~~~~~-g~~vAV------K~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~~~ 642 (809)
..+.|| ||.||+|.+.. ..+||| |..+.. ..+....|.+|..++...+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 456676 99999999764 357888 766543 22334568889999999999999999888654
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.26 E-value=5.9 Score=38.66 Aligned_cols=116 Identities=7% Similarity=0.068 Sum_probs=77.5
Q ss_pred CCCceEeEEeEEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCC
Q 043333 629 QHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLAYLHEESRLKIVHRDIKATN 708 (809)
Q Consensus 629 ~H~nIv~l~~~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~Dlkp~N 708 (809)
.||+.+.. ..-.+.+.+.+.|+.-+.+ ..|- .-...+...+++++.+++....+++.. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~--~~f~-----~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNH--TPFD-----NIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTS--EEGG-----GGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCccc--CCHH-----HHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 58888866 4566667777766644422 2221 122467788999999999877666554 788899999
Q ss_pred EEEcCCCceEEEecCCccccCCCCcceeccccccccccchhhhccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 043333 709 VLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNVI 780 (809)
Q Consensus 709 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwSlGvil~elltGk~P~~ 780 (809)
++++.++.+++.=.|+-..+ +|. ..+...=.-.+=+++..++++|..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999876653322 221 12222333456677778888888874
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=78.04 E-value=1.2 Score=31.38 Aligned_cols=26 Identities=8% Similarity=0.217 Sum_probs=10.9
Q ss_pred eeehhHHHHHHHHH-HHHHHHhhhccc
Q 043333 520 MVVGIVAAAAFILI-LIVSILWWKGCF 545 (809)
Q Consensus 520 ~i~~~~~~~~~~~~-l~~~~~~~~~~~ 545 (809)
++.+++++++++++ .+..+++||+++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 33444444444333 333444554443
No 455
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=67.36 E-value=2.7 Score=30.94 Aligned_cols=32 Identities=28% Similarity=0.487 Sum_probs=16.5
Q ss_pred cceeehhHHHHHHHHHHHHHHHhhhccccccc
Q 043333 518 VGMVVGIVAAAAFILILIVSILWWKGCFKRKH 549 (809)
Q Consensus 518 ~~~i~~~~~~~~~~~~l~~~~~~~~~~~~r~~ 549 (809)
+++++..+++.++++++++.++|....++|++
T Consensus 9 ~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 34544444444445555555556555555554
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=66.16 E-value=2.6 Score=29.28 Aligned_cols=14 Identities=14% Similarity=0.508 Sum_probs=6.8
Q ss_pred ceeehhHHHHHHHH
Q 043333 519 GMVVGIVAAAAFIL 532 (809)
Q Consensus 519 ~~i~~~~~~~~~~~ 532 (809)
++++++++++++++
T Consensus 14 ~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 14 AVIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred EEEeehhHHHHHHH
Confidence 44445555555443
No 457
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=65.53 E-value=12 Score=36.65 Aligned_cols=84 Identities=12% Similarity=0.129 Sum_probs=59.4
Q ss_pred CCCceEeEEeEEEeCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEEcCCCCC
Q 043333 629 QHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGLARGLA-YLHEESRLKIVHRDIKAT 707 (809)
Q Consensus 629 ~H~nIv~l~~~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~~L~-yLH~~~~~~iiH~Dlkp~ 707 (809)
.||.+ -...-.+.+.+.+.|+.-+++-=...+ ..++...+++++.+++.... +++. -+|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence 57887 344446778888878755443222222 24677889999999888666 5554 377889999
Q ss_pred CEEEcCCCceEEEecCCcc
Q 043333 708 NVLLDKDLNPKISDFGLAK 726 (809)
Q Consensus 708 NILl~~~~~~kl~DfGla~ 726 (809)
||++|.++.+++.-.|+-.
T Consensus 114 NL~f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKE 132 (219)
T ss_dssp GEEECTTCCEEESCCEETT
T ss_pred eEEEeCCCcEEEEEcCCcc
Confidence 9999999999998777643
No 458
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=59.81 E-value=5.2 Score=29.56 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=17.0
Q ss_pred ccceeehhHHHHHHHHHHHHHHHhhhccccccc
Q 043333 517 NVGMVVGIVAAAAFILILIVSILWWKGCFKRKH 549 (809)
Q Consensus 517 ~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~r~~ 549 (809)
.+++++..+++.++++++++.++|....++|++
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK~GFFkR~~ 43 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNR 43 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 345555444444445555555556555555554
No 459
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=59.08 E-value=7.5 Score=27.13 Aligned_cols=31 Identities=29% Similarity=0.486 Sum_probs=15.8
Q ss_pred cceeehhHHHHHHHHHHHHHHHhhhcccccc
Q 043333 518 VGMVVGIVAAAAFILILIVSILWWKGCFKRK 548 (809)
Q Consensus 518 ~~~i~~~~~~~~~~~~l~~~~~~~~~~~~r~ 548 (809)
+++++..+++.++++++++..+|....++|+
T Consensus 10 ~wiIi~s~l~GLllL~li~~~LwK~GFFkR~ 40 (42)
T 2k1a_A 10 IWWVLVGVLGGLLLLTILVLAMWKVGFFKRN 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 3444444444444445555555655555554
No 460
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=51.56 E-value=18 Score=25.50 Aligned_cols=9 Identities=11% Similarity=-0.071 Sum_probs=3.7
Q ss_pred ehhHHHHHH
Q 043333 522 VGIVAAAAF 530 (809)
Q Consensus 522 ~~~~~~~~~ 530 (809)
.+++++++.
T Consensus 11 ~~IA~gVVg 19 (44)
T 2ks1_B 11 PSIATGMVG 19 (44)
T ss_dssp SSSTHHHHH
T ss_pred ceEEeehhH
Confidence 344444443
No 461
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=48.05 E-value=12 Score=26.45 Aligned_cols=20 Identities=25% Similarity=0.210 Sum_probs=8.4
Q ss_pred ehhHHHHHH-HHHHHHHHHhh
Q 043333 522 VGIVAAAAF-ILILIVSILWW 541 (809)
Q Consensus 522 ~~~~~~~~~-~~~l~~~~~~~ 541 (809)
.++.++++. +++++++...+
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~ 30 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTF 30 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeehHHHHHHHHHHHHH
Confidence 444444444 33344444433
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=44.72 E-value=44 Score=27.99 Aligned_cols=41 Identities=12% Similarity=-0.027 Sum_probs=17.2
Q ss_pred CCccccCCcCCceeeeccccccCCCChhhhccccccEEeccC
Q 043333 179 PFPRLSNLKNMNYLILRSGNIIGEMPEYLGQMIGLRVLDLSF 220 (809)
Q Consensus 179 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (809)
....|.++++|+.+.|-. .++.+-..+|.++.+|+.+.+..
T Consensus 12 ~~~aF~~c~~L~~i~iP~-~v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 12 DKSLFAGNTVIREITVQP-NIGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CSCTTTTCTTCCCEEECT-TSSCCCTTSSTTCTTCCCEEECC
T ss_pred cHHHhcCCCCCcEEEcCC-chheEcHHHHhccCCccEEEEcC
Confidence 333344444444444432 23333344444444444444443
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=42.90 E-value=42 Score=28.16 Aligned_cols=49 Identities=18% Similarity=0.068 Sum_probs=36.7
Q ss_pred cCcCCCCCCccccCCCCCCEEeccCCCCCCCCCccccCCcCCceeeeccc
Q 043333 148 GSGLAGPIPSGIASLVELTDLRISDLNGPEGPFPRLSNLKNMNYLILRSG 197 (809)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N 197 (809)
+..++.+-...|.++.+|+.+.|-. .++.+....|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~-~v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQP-NIGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECT-TSSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCC-chheEcHHHHhccCCccEEEEcCC
Confidence 3455555567788888888888876 577777788888888888888653
No 464
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=42.05 E-value=8.6 Score=26.20 Aligned_cols=23 Identities=22% Similarity=0.483 Sum_probs=16.9
Q ss_pred CCCcccceeehhHHHHHHHHHHH
Q 043333 513 SNSTNVGMVVGIVAAAAFILILI 535 (809)
Q Consensus 513 ~~~~~~~~i~~~~~~~~~~~~l~ 535 (809)
+.....+++++.++++++++.++
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~ 31 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGIL 31 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeeeehHHHHHHHHHHHHH
Confidence 45667788999888877765544
No 465
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=32.48 E-value=21 Score=25.11 Aligned_cols=21 Identities=24% Similarity=0.221 Sum_probs=8.1
Q ss_pred hHHHHHHHHHHHHHHHhhhcc
Q 043333 524 IVAAAAFILILIVSILWWKGC 544 (809)
Q Consensus 524 ~~~~~~~~~~l~~~~~~~~~~ 544 (809)
++++++-+++++++.+.+.-.
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~ 34 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGIL 34 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhh
Confidence 333334433333444444333
No 466
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=30.42 E-value=65 Score=33.51 Aligned_cols=138 Identities=17% Similarity=0.148 Sum_probs=70.8
Q ss_pred CCeeccCCCccEEEeEeeCCeEEEEEEecccCcccchhHHHHHHHHhhcCCCceEeEEeEE--------------E----
Q 043333 580 DNKIGEGGFGPVYKGLLADGKVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCC--------------I---- 641 (809)
Q Consensus 580 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~~~~--------------~---- 641 (809)
++..-.|. +.||.+.. ++..|+||-.. ....+.|..++...-.+.-|+..-+. +. .
T Consensus 74 I~~s~~Gs-tgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 74 IERSEKGT-EGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EEECCSTT-SCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSC
T ss_pred EEeccCCC-CCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhhhhH
Confidence 34445555 55665554 57788899442 22233444455444455556532221 11 0
Q ss_pred -----eCCeEEEEEEcccCCchhhhccCCCccCCCCCHHHHHHHHHHH--HHHHHHHHhCC-CCCeEE-cCCCCCCEEEc
Q 043333 642 -----EGNQLLLIYEYMENNSLARALFGPEEHRLKLDWPTRHSICIGL--ARGLAYLHEES-RLKIVH-RDIKATNVLLD 712 (809)
Q Consensus 642 -----~~~~~~lV~ey~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~i--a~~L~yLH~~~-~~~iiH-~Dlkp~NILl~ 712 (809)
.....+++|||.++..|.+.-+.... ..+.. +.+.++ .-+++++..++ +.+.+. .-=.++|||++
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~--~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTSAP--EVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSSHH--HHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred HHHHhhcccceehhhhcCCCccccchhhhhh--hhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEe
Confidence 12246799999997665543211100 01221 223332 23456665443 222221 12578899998
Q ss_pred CCC-ceEEEecCCccccC
Q 043333 713 KDL-NPKISDFGLAKLDE 729 (809)
Q Consensus 713 ~~~-~~kl~DfGla~~~~ 729 (809)
++. .+.++|-+.+....
T Consensus 222 ~~n~~~~~IDhn~af~~~ 239 (342)
T 1cja_A 222 ERGATVVPIDSKIIPLDA 239 (342)
T ss_dssp SBTTCEEECSCCCCCCCS
T ss_pred CCCCeEEEEcCCccccCC
Confidence 754 48899999986543
No 467
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=27.22 E-value=40 Score=22.11 Aligned_cols=23 Identities=26% Similarity=0.625 Sum_probs=12.5
Q ss_pred ceeehhHHHHHHHHHHHH-HHHhh
Q 043333 519 GMVVGIVAAAAFILILIV-SILWW 541 (809)
Q Consensus 519 ~~i~~~~~~~~~~~~l~~-~~~~~ 541 (809)
+.++|++++.++..+++. .+++|
T Consensus 7 gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 7 GVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEeEeHHHHHHHHHHHHHHhhe
Confidence 556777777665444433 33344
No 468
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=26.42 E-value=41 Score=26.26 Aligned_cols=28 Identities=25% Similarity=0.388 Sum_probs=9.1
Q ss_pred ehhHHHHHHHHHHHHHHHhhhccccccch
Q 043333 522 VGIVAAAAFILILIVSILWWKGCFKRKHT 550 (809)
Q Consensus 522 ~~~~~~~~~~~~l~~~~~~~~~~~~r~~~ 550 (809)
.|++.+++ ++++-++++.+++|+.+..+
T Consensus 22 gGLifA~v-Lfi~GI~iilS~kcrCk~~q 49 (74)
T 2zxe_G 22 VGLIVAAV-LCVIGIIILLAGKCRCKFNQ 49 (74)
T ss_dssp HHHHHHHH-HHHHHHHHHTTTC-------
T ss_pred ccchhHHH-HHHHHHHHHHcCccccCCCC
Confidence 34443333 33333444555666544443
No 469
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=22.84 E-value=13 Score=24.67 Aligned_cols=7 Identities=14% Similarity=-0.140 Sum_probs=3.0
Q ss_pred HHHhhhc
Q 043333 537 SILWWKG 543 (809)
Q Consensus 537 ~~~~~~~ 543 (809)
..+++||
T Consensus 27 ~~~~iRR 33 (35)
T 1iij_A 27 VGILIKR 33 (35)
T ss_dssp TTHHHHH
T ss_pred hheEEee
Confidence 3444443
No 470
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=21.11 E-value=35 Score=26.10 Aligned_cols=23 Identities=9% Similarity=0.190 Sum_probs=8.9
Q ss_pred ehhHHHHHHHHHHHHHHHhhhccc
Q 043333 522 VGIVAAAAFILILIVSILWWKGCF 545 (809)
Q Consensus 522 ~~~~~~~~~~~~l~~~~~~~~~~~ 545 (809)
.|++.+++++++. ++++.+.+|+
T Consensus 20 gGLifA~vLfi~G-I~iilS~kcr 42 (67)
T 2jp3_A 20 GGLIFGGLLCIAG-IALALSGKCK 42 (67)
T ss_dssp HHHHHHHHHHHHH-HHHHHTTHHH
T ss_pred cchhhHHHHHHHH-HHHHHcCccc
Confidence 3444333333333 3333444443
Done!