Query 043334
Match_columns 903
No_of_seqs 696 out of 4545
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 04:02:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043334.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043334hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02672 methionine S-methyltr 100.0 3E-205 6E-210 1850.7 80.8 895 1-902 89-983 (1082)
2 COG0436 Aspartate/tyrosine/aro 100.0 3E-44 6.5E-49 408.3 32.0 272 615-903 28-307 (393)
3 KOG0257 Kynurenine aminotransf 100.0 4.7E-41 1E-45 364.5 26.6 298 588-903 9-321 (420)
4 PLN02368 alanine transaminase 100.0 4.7E-39 1E-43 367.9 28.1 310 587-903 11-372 (407)
5 PLN00175 aminotransferase fami 100.0 2.7E-38 5.7E-43 363.8 33.6 289 587-902 32-326 (413)
6 PRK06290 aspartate aminotransf 100.0 3.6E-38 7.7E-43 362.2 33.1 307 557-902 2-317 (410)
7 PRK07366 succinyldiaminopimela 100.0 2.6E-38 5.6E-43 361.3 31.1 296 588-902 4-306 (388)
8 PRK09147 succinyldiaminopimela 100.0 3.8E-38 8.3E-43 360.9 31.9 300 589-902 3-311 (396)
9 PRK07681 aspartate aminotransf 100.0 5.4E-38 1.2E-42 360.0 32.8 295 588-902 6-306 (399)
10 PRK06348 aspartate aminotransf 100.0 2.5E-37 5.4E-42 352.8 32.8 290 587-902 6-301 (384)
11 PTZ00377 alanine aminotransfer 100.0 1.5E-37 3.3E-42 364.3 30.1 310 587-902 10-379 (481)
12 TIGR03540 DapC_direct LL-diami 100.0 2.9E-37 6.3E-42 352.0 31.6 295 588-902 3-304 (383)
13 PRK09276 LL-diaminopimelate am 100.0 4.7E-37 1E-41 350.5 32.3 294 589-902 6-306 (385)
14 PRK05942 aspartate aminotransf 100.0 6.2E-37 1.3E-41 350.7 31.9 295 588-902 9-310 (394)
15 PRK08068 transaminase; Reviewe 100.0 6.7E-37 1.5E-41 349.8 31.9 293 589-902 7-307 (389)
16 PRK08636 aspartate aminotransf 100.0 7.3E-37 1.6E-41 351.1 32.3 297 586-902 5-315 (403)
17 PRK08960 hypothetical protein; 100.0 9.9E-37 2.1E-41 348.2 32.4 292 587-902 5-302 (387)
18 PRK13355 bifunctional HTH-doma 100.0 7.1E-37 1.5E-41 361.6 31.9 296 587-902 119-427 (517)
19 TIGR03538 DapC_gpp succinyldia 100.0 1E-36 2.2E-41 348.8 31.6 297 592-902 5-310 (393)
20 PRK09148 aminotransferase; Val 100.0 1.1E-36 2.3E-41 349.9 31.7 295 588-902 4-305 (405)
21 PLN02187 rooty/superroot1 100.0 1.1E-36 2.4E-41 354.6 30.8 272 612-902 63-351 (462)
22 PLN00143 tyrosine/nicotianamin 100.0 1.5E-36 3.4E-41 348.9 30.7 272 611-901 28-316 (409)
23 PRK06855 aminotransferase; Val 100.0 1.3E-36 2.9E-41 351.9 30.3 273 612-902 29-319 (433)
24 PLN02656 tyrosine transaminase 100.0 1.9E-36 4.2E-41 348.2 30.9 273 611-902 27-316 (409)
25 PRK12414 putative aminotransfe 100.0 2.2E-36 4.8E-41 344.9 30.8 268 614-902 28-301 (384)
26 PRK06207 aspartate aminotransf 100.0 4.2E-36 9E-41 345.0 31.2 271 613-902 37-318 (405)
27 PLN00145 tyrosine/nicotianamin 100.0 6.5E-36 1.4E-40 345.5 32.8 270 614-902 51-337 (430)
28 PRK07682 hypothetical protein; 100.0 5.3E-36 1.2E-40 341.0 30.3 268 615-902 20-293 (378)
29 PRK06107 aspartate aminotransf 100.0 8.9E-36 1.9E-40 342.0 31.7 295 587-902 6-308 (402)
30 PRK05839 hypothetical protein; 100.0 9.9E-36 2.1E-40 338.4 31.6 269 613-902 22-298 (374)
31 COG1167 ARO8 Transcriptional r 100.0 2E-35 4.3E-40 343.0 33.5 267 615-903 89-368 (459)
32 PRK09082 methionine aminotrans 100.0 1.2E-35 2.5E-40 339.3 30.4 290 587-902 8-303 (386)
33 PRK07337 aminotransferase; Val 100.0 1.7E-35 3.6E-40 338.2 31.2 291 588-902 4-300 (388)
34 PLN02450 1-aminocyclopropane-1 100.0 8.8E-36 1.9E-40 347.5 29.0 280 613-902 36-341 (468)
35 PRK07683 aminotransferase A; V 100.0 3E-35 6.5E-40 336.0 32.4 289 588-902 6-300 (387)
36 PRK08912 hypothetical protein; 100.0 3E-35 6.4E-40 336.0 32.2 290 587-902 4-299 (387)
37 PTZ00433 tyrosine aminotransfe 100.0 4.9E-35 1.1E-39 337.0 31.8 272 612-902 30-322 (412)
38 PRK09257 aromatic amino acid a 100.0 2.2E-35 4.8E-40 338.1 28.6 297 591-902 5-326 (396)
39 PRK06108 aspartate aminotransf 100.0 7.3E-35 1.6E-39 331.8 31.5 288 590-902 4-299 (382)
40 PRK08361 aspartate aminotransf 100.0 4.9E-35 1.1E-39 334.7 29.9 291 587-902 10-306 (391)
41 PRK07309 aromatic amino acid a 100.0 1.3E-34 2.8E-39 331.3 33.0 290 587-902 7-304 (391)
42 PRK07590 L,L-diaminopimelate a 100.0 5.4E-35 1.2E-39 336.3 30.0 264 613-902 32-329 (409)
43 PRK07550 hypothetical protein; 100.0 1.2E-34 2.5E-39 331.0 32.0 294 588-902 3-303 (386)
44 PLN02376 1-aminocyclopropane-1 100.0 4.5E-35 9.8E-40 342.9 28.7 280 614-902 45-348 (496)
45 PRK05957 aspartate aminotransf 100.0 2.2E-34 4.7E-39 329.1 32.5 290 587-902 4-300 (389)
46 PRK07777 aminotransferase; Val 100.0 2E-34 4.4E-39 329.1 31.9 289 589-902 4-299 (387)
47 TIGR03537 DapC succinyldiamino 100.0 1.2E-34 2.6E-39 326.6 29.4 263 617-902 2-272 (350)
48 PTZ00376 aspartate aminotransf 100.0 7.9E-35 1.7E-39 334.4 27.6 295 593-902 10-331 (404)
49 PLN02607 1-aminocyclopropane-1 100.0 1.6E-34 3.5E-39 334.7 30.3 278 613-902 45-348 (447)
50 PLN02231 alanine transaminase 100.0 2.4E-34 5.2E-39 338.8 31.9 299 592-903 112-432 (534)
51 TIGR01264 tyr_amTase_E tyrosin 100.0 3.5E-34 7.6E-39 328.7 32.0 271 612-902 28-313 (401)
52 PRK07324 transaminase; Validat 100.0 8.1E-35 1.7E-39 330.8 25.9 261 612-902 23-289 (373)
53 PRK07568 aspartate aminotransf 100.0 5.6E-34 1.2E-38 326.4 32.3 293 588-902 4-302 (397)
54 PRK09265 aminotransferase AlaT 100.0 5.3E-34 1.1E-38 327.6 31.1 297 587-902 6-314 (404)
55 PRK08363 alanine aminotransfer 100.0 3.7E-34 8E-39 328.2 29.8 269 612-902 27-309 (398)
56 PRK08175 aminotransferase; Val 100.0 4.7E-34 1E-38 327.0 30.5 269 612-902 26-304 (395)
57 PRK09275 aspartate aminotransf 100.0 1.5E-34 3.2E-39 336.6 25.9 265 616-903 101-421 (527)
58 PRK01533 histidinol-phosphate 100.0 2.7E-34 5.9E-39 325.5 26.3 257 613-901 27-285 (366)
59 PRK05764 aspartate aminotransf 100.0 1.5E-33 3.2E-38 322.5 31.9 296 587-902 4-305 (393)
60 PRK02610 histidinol-phosphate 100.0 1.4E-33 3E-38 320.9 29.3 259 615-901 28-297 (374)
61 COG1168 MalY Bifunctional PLP- 100.0 2.4E-33 5.2E-38 301.9 28.5 271 614-902 24-301 (388)
62 PRK14809 histidinol-phosphate 100.0 2.2E-33 4.7E-38 317.2 28.8 256 613-902 28-286 (357)
63 PRK15481 transcriptional regul 100.0 9.5E-34 2.1E-38 328.1 26.4 260 614-902 84-350 (431)
64 TIGR01265 tyr_nico_aTase tyros 100.0 5.6E-33 1.2E-37 319.0 32.1 272 612-902 28-315 (403)
65 PRK07865 N-succinyldiaminopime 100.0 2.4E-33 5.2E-38 317.7 28.0 279 587-902 3-289 (364)
66 PRK06358 threonine-phosphate d 100.0 4.6E-33 9.9E-38 314.3 29.8 259 613-902 17-278 (354)
67 PRK03317 histidinol-phosphate 100.0 2.7E-33 6E-38 317.7 27.9 259 616-902 27-292 (368)
68 KOG0259 Tyrosine aminotransfer 100.0 4.9E-33 1.1E-37 296.5 27.9 286 598-902 43-346 (447)
69 TIGR03801 asp_4_decarbox aspar 100.0 6.2E-33 1.4E-37 322.6 26.1 264 616-903 95-420 (521)
70 TIGR03542 DAPAT_plant LL-diami 100.0 2.2E-32 4.9E-37 313.9 29.5 262 613-902 31-322 (402)
71 PLN02397 aspartate transaminas 100.0 3.1E-32 6.7E-37 314.4 30.1 297 591-902 27-349 (423)
72 PRK05166 histidinol-phosphate 100.0 2.8E-32 6E-37 309.8 28.2 260 613-902 34-296 (371)
73 TIGR03539 DapC_actino succinyl 100.0 5.1E-32 1.1E-36 306.1 29.4 258 612-902 18-283 (357)
74 PRK08056 threonine-phosphate d 100.0 4.8E-32 1E-36 306.2 28.7 257 613-902 18-277 (356)
75 PRK03158 histidinol-phosphate 100.0 3.7E-32 8E-37 307.3 27.4 257 614-902 28-286 (359)
76 PLN03026 histidinol-phosphate 100.0 4.3E-32 9.4E-37 309.2 28.1 253 613-902 50-304 (380)
77 PRK08153 histidinol-phosphate 100.0 7.6E-32 1.7E-36 306.0 28.2 253 615-902 32-287 (369)
78 PF00155 Aminotran_1_2: Aminot 100.0 3.3E-32 7.3E-37 307.5 23.6 272 616-902 2-289 (363)
79 PRK07392 threonine-phosphate d 100.0 2.2E-31 4.8E-36 301.2 29.3 256 612-902 19-280 (360)
80 COG0079 HisC Histidinol-phosph 100.0 1.5E-31 3.3E-36 299.6 27.4 253 614-902 21-276 (356)
81 PRK09105 putative aminotransfe 100.0 1.6E-31 3.4E-36 303.5 27.9 251 615-902 43-296 (370)
82 PRK06836 aspartate aminotransf 100.0 1.3E-30 2.9E-35 298.5 31.2 245 613-874 31-297 (394)
83 PRK04870 histidinol-phosphate 100.0 5.2E-31 1.1E-35 297.6 27.1 253 613-902 24-281 (356)
84 PRK09440 avtA valine--pyruvate 100.0 6.6E-31 1.4E-35 303.0 26.7 265 614-902 29-318 (416)
85 PRK05387 histidinol-phosphate 100.0 1E-30 2.2E-35 294.7 27.4 248 614-902 23-277 (353)
86 PRK14808 histidinol-phosphate 100.0 1.7E-30 3.7E-35 291.2 27.7 246 613-902 17-266 (335)
87 PRK14807 histidinol-phosphate 100.0 3.3E-30 7.1E-35 290.7 29.6 250 615-902 22-276 (351)
88 PRK08637 hypothetical protein; 100.0 2.5E-30 5.5E-35 295.6 28.1 244 643-902 39-306 (388)
89 PRK01688 histidinol-phosphate 100.0 9.3E-31 2E-35 295.1 23.3 249 616-902 29-279 (351)
90 PRK06225 aspartate aminotransf 100.0 4.7E-30 1E-34 292.5 29.0 277 592-901 7-290 (380)
91 PRK03321 putative aminotransfe 100.0 2.6E-30 5.6E-35 291.5 25.8 237 615-874 22-260 (352)
92 PRK03967 histidinol-phosphate 100.0 6.4E-30 1.4E-34 286.7 28.1 227 614-874 17-248 (337)
93 PRK04781 histidinol-phosphate 100.0 4.6E-30 9.9E-35 290.9 27.1 252 616-902 32-286 (364)
94 PRK05664 threonine-phosphate d 100.0 4.2E-30 9.1E-35 287.4 25.8 236 615-902 20-256 (330)
95 PRK02731 histidinol-phosphate 100.0 8.6E-30 1.9E-34 288.8 28.2 257 613-902 30-289 (367)
96 KOG0256 1-aminocyclopropane-1- 100.0 4.3E-30 9.3E-35 276.4 24.1 280 613-903 71-373 (471)
97 KOG0634 Aromatic amino acid am 100.0 1.7E-29 3.6E-34 274.2 27.0 249 643-902 95-366 (472)
98 PRK06959 putative threonine-ph 100.0 1.2E-29 2.5E-34 284.8 24.9 239 615-902 24-262 (339)
99 PRK08354 putative aminotransfe 100.0 4.8E-29 1E-33 276.6 28.9 237 614-901 7-243 (311)
100 PRK04635 histidinol-phosphate 100.0 1.8E-29 4E-34 284.9 25.1 250 614-902 30-280 (354)
101 TIGR01141 hisC histidinol-phos 100.0 5.1E-29 1.1E-33 280.1 27.0 255 613-902 17-274 (346)
102 PRK06425 histidinol-phosphate 100.0 6.1E-29 1.3E-33 278.3 27.2 240 616-902 17-256 (332)
103 PRK00950 histidinol-phosphate 100.0 8.6E-29 1.9E-33 279.9 28.1 252 613-902 32-287 (361)
104 PRK07908 hypothetical protein; 100.0 2.7E-28 5.9E-33 274.8 28.5 248 613-902 20-270 (349)
105 TIGR01140 L_thr_O3P_dcar L-thr 100.0 2.4E-27 5.2E-32 265.2 26.6 245 612-902 14-258 (330)
106 KOG0633 Histidinol phosphate a 99.9 1.6E-24 3.5E-29 220.6 14.7 253 612-902 38-293 (375)
107 cd00609 AAT_like Aspartate ami 99.9 6.2E-23 1.3E-27 229.2 27.8 265 618-902 1-272 (350)
108 PRK13238 tnaA tryptophanase/L- 99.9 5.2E-23 1.1E-27 238.9 25.3 259 590-873 12-309 (460)
109 PRK06939 2-amino-3-ketobutyrat 99.9 9.8E-21 2.1E-25 216.6 28.8 256 612-902 39-310 (397)
110 TIGR00858 bioF 8-amino-7-oxono 99.9 1.4E-20 2.9E-25 212.1 28.6 255 612-902 13-282 (360)
111 COG1448 TyrB Aspartate/tyrosin 99.9 7.3E-21 1.6E-25 205.8 24.4 295 593-903 7-327 (396)
112 COG2890 HemK Methylase of poly 99.9 1.6E-21 3.4E-26 212.0 19.1 181 1-217 83-265 (280)
113 cd00617 Tnase_like Tryptophana 99.9 9.1E-21 2E-25 217.5 23.1 218 611-854 7-258 (431)
114 TIGR01822 2am3keto_CoA 2-amino 99.9 6.2E-20 1.3E-24 210.1 29.4 253 613-902 36-306 (393)
115 KOG0258 Alanine aminotransfera 99.9 6.7E-21 1.5E-25 204.2 19.0 257 643-902 108-376 (475)
116 PRK14966 unknown domain/N5-glu 99.9 7.6E-21 1.7E-25 213.0 19.1 182 2-217 226-407 (423)
117 COG3977 Alanine-alpha-ketoisov 99.9 2.5E-20 5.5E-25 193.6 20.4 265 614-901 29-317 (417)
118 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.3E-19 2.9E-24 206.7 28.2 234 612-874 30-278 (385)
119 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.1E-19 2.3E-24 204.4 26.6 230 627-901 32-266 (346)
120 TIGR03533 L3_gln_methyl protei 99.8 3.8E-20 8.2E-25 202.2 18.6 179 2-213 93-272 (284)
121 TIGR00536 hemK_fam HemK family 99.8 3.1E-20 6.7E-25 203.3 17.5 183 2-216 86-270 (284)
122 PRK05958 8-amino-7-oxononanoat 99.8 4.9E-19 1.1E-23 201.6 27.9 235 612-874 36-284 (385)
123 PRK01544 bifunctional N5-gluta 99.8 3.3E-20 7.2E-25 217.4 18.1 187 1-217 86-295 (506)
124 TIGR03704 PrmC_rel_meth putati 99.8 8.7E-20 1.9E-24 195.9 18.0 181 1-213 57-238 (251)
125 PLN02242 methionine gamma-lyas 99.8 1.6E-19 3.5E-24 207.7 21.4 207 650-902 74-291 (418)
126 PLN02822 serine palmitoyltrans 99.8 7.4E-19 1.6E-23 205.8 27.2 261 613-902 107-381 (481)
127 PRK07049 methionine gamma-lyas 99.8 2.3E-19 5E-24 207.0 22.6 188 654-873 85-287 (427)
128 PRK11805 N5-glutamine S-adenos 99.8 1.5E-19 3.3E-24 199.2 18.8 178 2-213 105-284 (307)
129 cd06502 TA_like Low-specificit 99.8 4.8E-19 1E-23 198.2 21.6 223 624-874 5-242 (338)
130 TIGR00707 argD acetylornithine 99.8 1.5E-18 3.2E-23 197.7 25.5 263 612-899 24-307 (379)
131 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 2E-18 4.4E-23 195.5 25.7 202 627-856 11-226 (361)
132 KOG2904 Predicted methyltransf 99.8 2E-19 4.3E-24 185.8 15.2 164 1-193 117-288 (328)
133 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 2E-18 4.3E-23 196.3 24.4 177 653-857 52-234 (370)
134 PRK13392 5-aminolevulinate syn 99.8 9.5E-18 2.1E-22 193.4 26.2 231 614-874 45-293 (410)
135 PRK10534 L-threonine aldolase; 99.8 1.4E-18 3.1E-23 194.4 18.8 229 617-873 1-242 (333)
136 PRK02627 acetylornithine amino 99.8 6.7E-18 1.5E-22 193.5 24.1 238 612-874 36-296 (396)
137 cd06454 KBL_like KBL_like; thi 99.8 1.9E-17 4.1E-22 186.0 27.0 229 617-874 3-247 (349)
138 PLN02721 threonine aldolase 99.8 8E-18 1.7E-22 189.5 23.3 216 616-857 6-233 (353)
139 cd00613 GDC-P Glycine cleavage 99.8 7.7E-18 1.7E-22 193.1 22.9 210 614-852 19-246 (398)
140 PRK10874 cysteine sulfinate de 99.8 4.9E-17 1.1E-21 186.8 27.6 209 615-853 18-243 (401)
141 PRK09328 N5-glutamine S-adenos 99.8 5.3E-18 1.2E-22 184.8 18.5 182 2-215 81-262 (275)
142 TIGR02379 ECA_wecE TDP-4-keto- 99.8 4.1E-17 9E-22 185.6 26.5 192 630-856 10-207 (376)
143 TIGR03534 RF_mod_PrmC protein- 99.8 7.3E-18 1.6E-22 181.0 18.8 183 2-217 61-243 (251)
144 TIGR03392 FeS_syn_CsdA cystein 99.8 6.2E-17 1.3E-21 185.8 27.6 208 616-853 16-240 (398)
145 PRK06234 methionine gamma-lyas 99.8 1.9E-17 4.2E-22 189.9 23.0 184 654-873 66-260 (400)
146 cd00378 SHMT Serine-glycine hy 99.8 2E-17 4.3E-22 190.0 22.9 213 615-856 19-249 (402)
147 PLN02483 serine palmitoyltrans 99.8 3.8E-17 8.2E-22 191.8 25.4 256 614-902 99-382 (489)
148 PRK01278 argD acetylornithine 99.8 4.2E-17 9E-22 186.7 25.2 265 612-901 28-314 (389)
149 PRK02948 cysteine desulfurase; 99.8 6.4E-17 1.4E-21 184.6 26.0 246 618-901 2-269 (381)
150 PRK06460 hypothetical protein; 99.8 3.1E-17 6.7E-22 186.7 21.9 170 652-857 45-219 (376)
151 PRK07179 hypothetical protein; 99.8 2.7E-16 5.9E-21 181.1 29.4 216 612-856 51-274 (407)
152 TIGR01437 selA_rel uncharacter 99.8 7.4E-17 1.6E-21 182.9 24.0 202 615-854 8-231 (363)
153 cd00610 OAT_like Acetyl ornith 99.8 1E-16 2.2E-21 184.6 25.0 269 612-901 33-332 (413)
154 PRK08776 cystathionine gamma-s 99.7 1.1E-16 2.3E-21 183.8 24.0 195 644-873 52-253 (405)
155 PF05175 MTS: Methyltransferas 99.7 1.6E-17 3.4E-22 168.3 14.4 141 2-198 5-148 (170)
156 PRK03244 argD acetylornithine 99.7 9E-17 2E-21 184.5 22.5 258 612-898 40-319 (398)
157 PRK14967 putative methyltransf 99.7 7.2E-17 1.6E-21 170.7 19.5 174 1-213 9-182 (223)
158 COG4123 Predicted O-methyltran 99.7 7E-17 1.5E-21 169.5 19.1 199 30-296 44-243 (248)
159 cd06451 AGAT_like Alanine-glyo 99.7 2.4E-16 5.1E-21 178.0 25.0 199 627-854 8-209 (356)
160 PRK08133 O-succinylhomoserine 99.7 9.8E-17 2.1E-21 183.5 22.0 168 652-855 61-233 (390)
161 TIGR01979 sufS cysteine desulf 99.7 5.7E-16 1.2E-20 178.1 27.3 211 613-853 15-242 (403)
162 PRK08249 cystathionine gamma-s 99.7 2.1E-16 4.5E-21 181.1 22.8 187 651-873 63-256 (398)
163 TIGR01821 5aminolev_synth 5-am 99.7 8.2E-16 1.8E-20 176.9 27.6 232 614-874 44-292 (402)
164 PRK08247 cystathionine gamma-s 99.7 1.7E-16 3.8E-21 180.1 21.7 187 651-873 51-244 (366)
165 PRK09295 bifunctional cysteine 99.7 7E-16 1.5E-20 177.6 26.9 208 615-852 22-246 (406)
166 TIGR00537 hemK_rel_arch HemK-r 99.7 1.4E-16 3.1E-21 162.6 18.6 166 7-216 1-166 (179)
167 TIGR01976 am_tr_V_VC1184 cyste 99.7 4.1E-16 8.8E-21 178.8 24.5 208 617-855 18-240 (397)
168 PRK08045 cystathionine gamma-s 99.7 3.4E-16 7.4E-21 178.6 22.8 188 652-874 52-246 (386)
169 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 1.4E-15 2.9E-20 174.2 27.8 213 615-855 18-244 (387)
170 TIGR02080 O_succ_thio_ly O-suc 99.7 3.5E-16 7.7E-21 178.3 22.7 185 652-871 51-242 (382)
171 PRK09064 5-aminolevulinate syn 99.7 2E-15 4.3E-20 173.9 28.7 232 614-874 45-293 (407)
172 PRK07503 methionine gamma-lyas 99.7 6.3E-16 1.4E-20 177.5 24.1 185 653-873 66-259 (403)
173 PLN02409 serine--glyoxylate am 99.7 7.6E-16 1.7E-20 177.0 24.7 241 628-901 19-285 (401)
174 PLN02855 Bifunctional selenocy 99.7 1.3E-15 2.9E-20 176.4 26.7 210 614-853 30-256 (424)
175 PRK00451 glycine dehydrogenase 99.7 6.4E-16 1.4E-20 180.2 24.1 205 616-852 69-290 (447)
176 PRK06767 methionine gamma-lyas 99.7 5.5E-16 1.2E-20 177.2 23.0 185 653-873 62-254 (386)
177 PRK07810 O-succinylhomoserine 99.7 8E-16 1.7E-20 176.5 23.5 186 653-873 71-263 (403)
178 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 2.8E-15 6.1E-20 168.7 27.6 242 627-902 8-272 (355)
179 PRK07811 cystathionine gamma-s 99.7 1E-15 2.2E-20 175.0 24.1 169 654-857 63-236 (388)
180 PRK07504 O-succinylhomoserine 99.7 1.1E-15 2.3E-20 175.3 23.2 185 653-873 66-258 (398)
181 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 1.3E-15 2.7E-20 173.7 23.5 191 631-855 11-205 (375)
182 PRK13479 2-aminoethylphosphona 99.7 2.3E-15 4.9E-20 171.0 25.3 199 628-855 15-217 (368)
183 TIGR01325 O_suc_HS_sulf O-succ 99.7 1E-15 2.2E-20 174.7 22.0 169 652-856 54-227 (380)
184 cd06453 SufS_like Cysteine des 99.7 3E-15 6.4E-20 170.2 24.9 199 628-855 10-224 (373)
185 TIGR01328 met_gam_lyase methio 99.7 1.8E-15 3.9E-20 173.1 23.0 167 653-855 60-231 (391)
186 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 4.1E-16 9E-21 180.0 17.5 160 652-846 57-220 (418)
187 PRK00011 glyA serine hydroxyme 99.7 2.2E-15 4.8E-20 174.1 23.4 212 615-857 25-254 (416)
188 cd00614 CGS_like CGS_like: Cys 99.7 2.4E-15 5.1E-20 171.1 23.1 189 650-873 38-233 (369)
189 PRK11658 UDP-4-amino-4-deoxy-L 99.7 8.6E-15 1.9E-19 167.1 26.8 191 631-855 14-206 (379)
190 PRK14968 putative methyltransf 99.7 2.4E-15 5.1E-20 154.1 19.9 171 4-214 2-172 (188)
191 PRK08574 cystathionine gamma-s 99.7 2.9E-15 6.3E-20 171.0 22.1 170 652-857 53-227 (385)
192 PRK08861 cystathionine gamma-s 99.7 5.9E-15 1.3E-19 168.1 24.0 187 652-873 53-246 (388)
193 cd00615 Orn_deC_like Ornithine 99.7 3.5E-15 7.5E-20 164.5 21.5 165 654-842 61-231 (294)
194 PRK13393 5-aminolevulinate syn 99.7 2.2E-14 4.8E-19 165.2 29.0 232 614-874 44-292 (406)
195 PRK05093 argD bifunctional N-s 99.7 6.9E-15 1.5E-19 169.3 24.7 232 612-874 37-298 (403)
196 PF12897 Aminotran_MocR: Alani 99.7 5.6E-15 1.2E-19 160.6 21.6 241 643-902 63-324 (425)
197 TIGR01977 am_tr_V_EF2568 cyste 99.7 1.5E-14 3.3E-19 164.4 25.6 201 619-846 2-215 (376)
198 PRK07050 cystathionine beta-ly 99.7 8E-15 1.7E-19 167.9 22.8 186 649-870 63-255 (394)
199 KOG3191 Predicted N6-DNA-methy 99.6 3.8E-15 8.1E-20 146.0 16.1 176 6-217 17-195 (209)
200 TIGR02326 transamin_PhnW 2-ami 99.6 3.1E-14 6.7E-19 161.4 26.2 221 650-902 33-277 (363)
201 PLN03227 serine palmitoyltrans 99.6 3.4E-14 7.3E-19 162.8 26.6 223 627-873 11-254 (392)
202 PRK05939 hypothetical protein; 99.6 5.3E-15 1.1E-19 169.4 18.9 160 649-845 45-208 (397)
203 TIGR03235 DNA_S_dndA cysteine 99.6 4.6E-14 9.9E-19 159.4 26.2 190 628-846 9-215 (353)
204 cd06450 DOPA_deC_like DOPA dec 99.6 8.8E-15 1.9E-19 164.3 20.2 194 631-844 13-230 (345)
205 PRK07505 hypothetical protein; 99.6 1.1E-13 2.4E-18 159.2 28.9 234 612-874 43-297 (402)
206 PRK15001 SAM-dependent 23S rib 99.6 5.4E-15 1.2E-19 166.2 17.0 139 3-194 203-344 (378)
207 TIGR03403 nifS_epsilon cystein 99.6 5.9E-14 1.3E-18 160.3 25.8 238 628-901 10-271 (382)
208 PRK07582 cystathionine gamma-l 99.6 2.2E-14 4.8E-19 162.9 21.9 181 654-873 53-240 (366)
209 TIGR03812 tyr_de_CO2_Arch tyro 99.6 8.5E-14 1.8E-18 158.2 26.6 185 649-853 56-248 (373)
210 TIGR02006 IscS cysteine desulf 99.6 8.3E-14 1.8E-18 160.3 26.2 200 617-846 4-219 (402)
211 PRK14012 cysteine desulfurase; 99.6 6.9E-14 1.5E-18 161.1 25.5 199 618-846 5-221 (404)
212 TIGR00713 hemL glutamate-1-sem 99.6 3.7E-14 8.1E-19 164.3 23.0 262 611-901 44-333 (423)
213 PRK13520 L-tyrosine decarboxyl 99.6 1E-13 2.2E-18 157.3 25.9 203 628-853 31-243 (371)
214 PRK07671 cystathionine beta-ly 99.6 4.3E-14 9.4E-19 161.0 22.9 171 651-857 49-224 (377)
215 PRK08088 4-aminobutyrate amino 99.6 4.3E-14 9.3E-19 163.8 23.1 265 611-901 37-335 (425)
216 PRK02936 argD acetylornithine 99.6 5.4E-14 1.2E-18 160.3 23.6 240 612-874 26-281 (377)
217 TIGR01329 cysta_beta_ly_E cyst 99.6 6E-14 1.3E-18 159.9 23.5 169 653-857 48-221 (378)
218 COG0156 BioF 7-keto-8-aminopel 99.6 2.2E-13 4.8E-18 153.3 27.3 234 613-874 37-287 (388)
219 PF13659 Methyltransf_26: Meth 99.6 4E-15 8.6E-20 140.5 11.3 115 31-191 1-116 (117)
220 COG2813 RsmC 16S RNA G1207 met 99.6 1.4E-14 3.1E-19 155.0 16.8 139 2-197 132-273 (300)
221 PRK08064 cystathionine beta-ly 99.6 6.3E-14 1.4E-18 160.4 22.8 183 650-868 52-239 (390)
222 PRK05968 hypothetical protein; 99.6 7.7E-14 1.7E-18 159.7 22.9 191 646-873 57-255 (389)
223 PRK04073 rocD ornithine--oxo-a 99.6 1.3E-13 2.8E-18 158.4 24.0 240 612-874 37-301 (396)
224 PRK06702 O-acetylhomoserine am 99.6 7.4E-14 1.6E-18 160.6 21.6 158 652-844 61-233 (432)
225 PRK00854 rocD ornithine--oxo-a 99.6 2E-13 4.2E-18 157.1 25.1 234 612-874 38-302 (401)
226 PRK09028 cystathionine beta-ly 99.6 1.4E-13 3E-18 157.0 23.1 165 655-855 64-233 (394)
227 PF12847 Methyltransf_18: Meth 99.6 2.7E-14 6E-19 133.6 13.5 111 30-190 1-111 (112)
228 PRK08248 O-acetylhomoserine am 99.6 4.8E-14 1E-18 163.0 18.3 159 651-844 63-225 (431)
229 PRK06176 cystathionine gamma-s 99.6 2.1E-13 4.6E-18 155.4 23.3 170 652-857 50-224 (380)
230 KOG1412 Aspartate aminotransfe 99.6 2.9E-13 6.2E-18 142.2 21.8 280 612-901 27-332 (410)
231 TIGR03402 FeS_nifS cysteine de 99.6 4.1E-13 8.9E-18 153.1 25.3 190 628-846 10-213 (379)
232 TIGR03531 selenium_SpcS O-phos 99.6 3.2E-13 7E-18 155.2 24.2 227 650-901 103-337 (444)
233 TIGR01324 cysta_beta_ly_B cyst 99.6 2.6E-13 5.7E-18 154.4 23.3 167 652-854 50-221 (377)
234 PRK00107 gidB 16S rRNA methylt 99.6 6.5E-14 1.4E-18 143.5 16.2 144 12-217 28-171 (187)
235 PLN02955 8-amino-7-oxononanoat 99.6 1.3E-12 2.8E-17 150.3 28.5 214 615-857 102-343 (476)
236 PLN02509 cystathionine beta-ly 99.6 3.2E-13 6.9E-18 156.7 23.2 169 649-854 131-304 (464)
237 PRK06084 O-acetylhomoserine am 99.5 8.8E-14 1.9E-18 160.6 17.8 158 652-844 58-219 (425)
238 PLN02651 cysteine desulfurase 99.5 6.9E-13 1.5E-17 150.6 24.9 197 620-846 3-215 (364)
239 cd01494 AAT_I Aspartate aminot 99.5 1.4E-13 2.9E-18 137.2 16.8 166 656-844 4-170 (170)
240 PRK09489 rsmC 16S ribosomal RN 99.5 9E-14 1.9E-18 155.5 16.5 137 2-196 170-309 (342)
241 PRK05967 cystathionine beta-ly 99.5 4.1E-13 9E-18 152.9 22.1 175 644-854 56-235 (395)
242 PHA03411 putative methyltransf 99.5 8.4E-14 1.8E-18 148.4 15.2 138 31-211 65-210 (279)
243 PRK12381 bifunctional succinyl 99.5 1.2E-12 2.6E-17 150.9 25.9 239 612-874 36-297 (406)
244 TIGR03588 PseC UDP-4-keto-6-de 99.5 1.7E-12 3.6E-17 148.4 26.9 192 630-854 9-208 (380)
245 PRK07269 cystathionine gamma-s 99.5 3.5E-13 7.5E-18 152.8 20.8 186 654-873 56-244 (364)
246 PTZ00125 ornithine aminotransf 99.5 8.5E-13 1.8E-17 151.7 24.3 265 612-899 28-316 (400)
247 PRK15407 lipopolysaccharide bi 99.5 3.4E-12 7.3E-17 148.1 28.8 204 617-855 25-245 (438)
248 KOG1411 Aspartate aminotransfe 99.5 2.7E-13 5.8E-18 144.3 17.1 268 596-874 36-326 (427)
249 COG2226 UbiE Methylase involve 99.5 1.4E-13 3E-18 144.9 14.9 104 30-188 51-154 (238)
250 PRK05937 8-amino-7-oxononanoat 99.5 5.2E-12 1.1E-16 143.8 28.4 229 615-873 4-256 (370)
251 TIGR00138 gidB 16S rRNA methyl 99.5 2.8E-13 6.1E-18 138.4 15.7 138 13-213 27-167 (181)
252 PRK11727 23S rRNA mA1618 methy 99.5 7.9E-13 1.7E-17 145.6 18.9 166 30-213 114-290 (321)
253 PRK04260 acetylornithine amino 99.5 3.5E-12 7.6E-17 145.4 25.0 261 612-902 26-302 (375)
254 TIGR01177 conserved hypothetic 99.5 4.1E-13 8.9E-18 150.3 17.0 135 29-215 181-315 (329)
255 PF01209 Ubie_methyltran: ubiE 99.5 1.3E-13 2.8E-18 146.3 12.0 132 12-203 34-166 (233)
256 cd00616 AHBA_syn 3-amino-5-hyd 99.5 6.8E-12 1.5E-16 141.2 26.6 185 635-854 3-191 (352)
257 PRK04366 glycine dehydrogenase 99.5 2E-12 4.4E-17 151.9 22.5 207 619-852 72-297 (481)
258 PLN00144 acetylornithine trans 99.5 5.3E-12 1.1E-16 144.3 23.7 264 612-900 12-305 (382)
259 PRK00121 trmB tRNA (guanine-N( 99.5 4.8E-13 1E-17 139.3 13.8 136 30-211 40-177 (202)
260 TIGR03246 arg_catab_astC succi 99.5 1.3E-11 2.8E-16 141.9 26.6 233 612-874 32-293 (397)
261 COG0399 WecE Predicted pyridox 99.5 1.5E-11 3.2E-16 137.6 25.7 192 630-856 14-209 (374)
262 PRK08360 4-aminobutyrate amino 99.4 3E-11 6.4E-16 140.5 27.2 268 611-899 37-341 (443)
263 COG2264 PrmA Ribosomal protein 99.4 1.2E-12 2.6E-17 141.2 14.4 128 30-216 162-289 (300)
264 PRK08287 cobalt-precorrin-6Y C 99.4 1.7E-12 3.7E-17 133.4 15.0 125 30-214 31-155 (187)
265 TIGR02752 MenG_heptapren 2-hep 99.4 3.9E-12 8.5E-17 135.1 18.2 106 30-190 45-151 (231)
266 PF13847 Methyltransf_31: Meth 99.4 6.4E-13 1.4E-17 131.9 11.2 109 30-192 3-112 (152)
267 PRK05994 O-acetylhomoserine am 99.4 3.4E-12 7.3E-17 147.8 18.9 156 653-843 64-223 (427)
268 COG0520 csdA Selenocysteine ly 99.4 1.4E-11 3E-16 141.0 23.2 209 614-852 20-245 (405)
269 PHA03412 putative methyltransf 99.4 1.7E-12 3.7E-17 135.5 13.8 108 31-188 50-160 (241)
270 PRK09792 4-aminobutyrate trans 99.4 3.6E-11 7.9E-16 139.1 26.1 246 611-874 36-312 (421)
271 PLN02233 ubiquinone biosynthes 99.4 5.1E-12 1.1E-16 136.8 17.7 109 29-189 72-181 (261)
272 PRK04612 argD acetylornithine 99.4 3.7E-11 8.1E-16 138.3 25.8 265 611-900 36-325 (408)
273 COG2263 Predicted RNA methylas 99.4 5.7E-12 1.2E-16 125.6 16.3 130 28-219 43-172 (198)
274 PRK00062 glutamate-1-semialdeh 99.4 1.7E-11 3.8E-16 142.1 23.2 239 612-874 47-313 (426)
275 TIGR00091 tRNA (guanine-N(7)-) 99.4 2.2E-12 4.7E-17 133.6 14.0 137 30-212 16-155 (194)
276 PRK11036 putative S-adenosyl-L 99.4 2.8E-12 6.1E-17 138.5 15.3 105 30-189 44-148 (255)
277 PLN02244 tocopherol O-methyltr 99.4 6.7E-12 1.4E-16 141.0 17.8 106 29-189 117-222 (340)
278 PF01041 DegT_DnrJ_EryC1: DegT 99.4 5E-11 1.1E-15 135.4 25.1 192 631-856 5-200 (363)
279 PRK11783 rlmL 23S rRNA m(2)G24 99.4 3.5E-12 7.6E-17 155.8 16.5 144 30-216 538-681 (702)
280 PRK08134 O-acetylhomoserine am 99.4 1.2E-11 2.7E-16 143.0 19.8 157 652-843 64-224 (433)
281 PRK11207 tellurite resistance 99.4 8E-12 1.7E-16 129.7 15.8 127 30-214 30-169 (197)
282 PRK14103 trans-aconitate 2-met 99.4 6.4E-12 1.4E-16 135.7 15.6 100 29-191 28-127 (255)
283 PLN02490 MPBQ/MSBQ methyltrans 99.4 1.1E-11 2.3E-16 137.9 17.5 127 30-214 113-255 (340)
284 PLN02396 hexaprenyldihydroxybe 99.4 1E-11 2.2E-16 137.5 17.0 133 29-217 130-291 (322)
285 PRK00517 prmA ribosomal protei 99.4 7.7E-12 1.7E-16 134.6 15.4 121 29-215 118-238 (250)
286 PRK06918 4-aminobutyrate amino 99.4 9.9E-11 2.1E-15 136.8 25.8 269 611-901 50-358 (451)
287 TIGR01885 Orn_aminotrans ornit 99.4 9.2E-11 2E-15 135.0 25.0 235 612-874 34-301 (401)
288 COG2242 CobL Precorrin-6B meth 99.4 1.2E-11 2.6E-16 123.9 15.3 126 29-213 33-159 (187)
289 PLN02624 ornithine-delta-amino 99.4 9.5E-11 2.1E-15 137.5 25.4 267 611-901 71-364 (474)
290 TIGR00477 tehB tellurite resis 99.4 8.7E-12 1.9E-16 129.2 14.8 125 30-213 30-167 (195)
291 PRK00377 cbiT cobalt-precorrin 99.4 9.1E-12 2E-16 129.3 14.9 127 28-210 38-165 (198)
292 TIGR00740 methyltransferase, p 99.4 4.5E-12 9.8E-17 135.5 12.4 108 30-191 53-162 (239)
293 PRK15451 tRNA cmo(5)U34 methyl 99.4 5E-12 1.1E-16 135.8 12.8 106 30-189 56-163 (247)
294 TIGR03438 probable methyltrans 99.4 3E-12 6.5E-17 141.5 11.3 119 30-198 63-185 (301)
295 PRK11873 arsM arsenite S-adeno 99.4 1.7E-11 3.8E-16 133.5 17.2 132 28-214 75-229 (272)
296 COG4106 Tam Trans-aconitate me 99.3 6.2E-12 1.3E-16 126.8 12.1 109 29-198 29-137 (257)
297 PF06325 PrmA: Ribosomal prote 99.3 5.5E-12 1.2E-16 137.5 12.7 124 29-215 160-283 (295)
298 PRK15128 23S rRNA m(5)C1962 me 99.3 2.3E-11 5.1E-16 138.5 18.1 130 30-203 220-353 (396)
299 TIGR02469 CbiT precorrin-6Y C5 99.3 1.2E-11 2.6E-16 117.5 13.1 104 30-190 19-122 (124)
300 PF00266 Aminotran_5: Aminotra 99.3 2.2E-10 4.8E-15 130.4 25.9 199 628-855 10-224 (371)
301 TIGR00406 prmA ribosomal prote 99.3 2E-11 4.4E-16 134.1 16.7 133 17-213 149-281 (288)
302 PRK13168 rumA 23S rRNA m(5)U19 99.3 1.5E-11 3.3E-16 143.1 16.5 143 30-240 297-442 (443)
303 PRK13034 serine hydroxymethylt 99.3 1.9E-10 4.1E-15 133.0 24.8 211 614-854 27-254 (416)
304 KOG1540 Ubiquinone biosynthesi 99.3 1.4E-11 3.1E-16 127.2 13.7 133 29-213 99-237 (296)
305 PRK03522 rumB 23S rRNA methylu 99.3 2.5E-11 5.4E-16 135.1 16.7 142 30-240 173-314 (315)
306 TIGR02618 tyr_phenol_ly tyrosi 99.3 3.8E-10 8.3E-15 128.5 26.3 185 656-856 75-278 (450)
307 PRK08114 cystathionine beta-ly 99.3 1.2E-10 2.6E-15 132.7 22.3 173 646-854 56-235 (395)
308 PRK07812 O-acetylhomoserine am 99.3 3.7E-11 7.9E-16 139.1 18.1 160 651-844 68-231 (436)
309 TIGR00700 GABAtrnsam 4-aminobu 99.3 1.7E-10 3.6E-15 133.7 23.2 271 611-901 29-336 (420)
310 TIGR00452 methyltransferase, p 99.3 4.2E-11 9.1E-16 132.1 17.2 152 6-215 97-273 (314)
311 PRK10909 rsmD 16S rRNA m(2)G96 99.3 2.6E-11 5.6E-16 125.5 13.8 80 30-126 53-132 (199)
312 PRK14902 16S rRNA methyltransf 99.3 5.6E-11 1.2E-15 138.4 18.2 152 30-213 250-406 (444)
313 TIGR02085 meth_trns_rumB 23S r 99.3 3.2E-11 7E-16 137.1 15.6 123 30-214 233-355 (374)
314 PRK06777 4-aminobutyrate amino 99.3 4.3E-10 9.2E-15 130.3 24.7 269 611-899 36-335 (421)
315 PF08241 Methyltransf_11: Meth 99.3 1.2E-11 2.6E-16 111.3 9.2 95 35-188 1-95 (95)
316 PTZ00098 phosphoethanolamine N 99.3 5.5E-11 1.2E-15 128.9 15.9 129 29-213 51-200 (263)
317 COG2227 UbiG 2-polyprenyl-3-me 99.3 1.7E-11 3.7E-16 127.0 11.2 110 29-196 58-167 (243)
318 smart00828 PKS_MT Methyltransf 99.3 4.8E-11 1E-15 126.2 14.7 128 32-214 1-143 (224)
319 PRK07495 4-aminobutyrate amino 99.3 5.3E-10 1.2E-14 129.5 24.3 271 611-902 36-338 (425)
320 PF01053 Cys_Met_Meta_PP: Cys/ 99.3 4E-10 8.6E-15 128.2 22.8 176 647-857 50-232 (386)
321 PRK15068 tRNA mo(5)U34 methylt 99.3 8.3E-11 1.8E-15 131.0 16.7 130 29-214 121-273 (322)
322 PRK01683 trans-aconitate 2-met 99.3 3.2E-11 7E-16 130.3 13.2 103 29-192 30-132 (258)
323 PRK07402 precorrin-6B methylas 99.3 5.7E-11 1.2E-15 123.1 14.1 126 30-213 40-168 (196)
324 COG2230 Cfa Cyclopropane fatty 99.3 7.7E-11 1.7E-15 126.3 15.1 106 28-189 70-175 (283)
325 PF02353 CMAS: Mycolic acid cy 99.3 6.3E-11 1.4E-15 128.6 14.6 106 28-189 60-165 (273)
326 PRK13944 protein-L-isoaspartat 99.3 6.5E-11 1.4E-15 123.7 14.0 103 30-192 72-175 (205)
327 PRK08117 4-aminobutyrate amino 99.2 1.3E-09 2.9E-14 126.7 26.2 269 612-901 40-346 (433)
328 PRK05613 O-acetylhomoserine am 99.2 1.3E-10 2.9E-15 134.4 17.7 160 650-843 67-230 (437)
329 PF13649 Methyltransf_25: Meth 99.2 1.8E-11 4E-16 112.7 8.3 98 34-184 1-101 (101)
330 PRK10901 16S rRNA methyltransf 99.2 1.7E-10 3.7E-15 133.7 18.0 149 29-211 243-397 (427)
331 TIGR00080 pimt protein-L-isoas 99.2 6.9E-11 1.5E-15 124.3 13.2 78 29-123 76-154 (215)
332 PLN02336 phosphoethanolamine N 99.2 1E-10 2.2E-15 137.8 16.0 127 30-213 266-412 (475)
333 PRK12335 tellurite resistance 99.2 1E-10 2.3E-15 128.5 15.1 125 30-213 120-257 (287)
334 COG1041 Predicted DNA modifica 99.2 9.8E-11 2.1E-15 127.9 14.3 155 4-217 177-332 (347)
335 TIGR00446 nop2p NOL1/NOP2/sun 99.2 2.6E-10 5.7E-15 123.7 17.7 147 30-209 71-222 (264)
336 PF04864 Alliinase_C: Allinase 99.2 7.4E-11 1.6E-15 127.4 13.1 188 651-874 46-241 (363)
337 PRK10258 biotin biosynthesis p 99.2 9.8E-11 2.1E-15 126.1 13.6 112 30-203 42-153 (251)
338 PRK13237 tyrosine phenol-lyase 99.2 4.3E-09 9.4E-14 120.3 27.4 185 656-855 82-284 (460)
339 PRK06434 cystathionine gamma-l 99.2 6.5E-10 1.4E-14 126.7 20.7 168 650-855 62-234 (384)
340 PRK14904 16S rRNA methyltransf 99.2 4.2E-10 9.1E-15 131.1 19.3 148 29-211 249-402 (445)
341 PRK04266 fibrillarin; Provisio 99.2 2.2E-10 4.8E-15 121.1 15.2 129 28-214 70-209 (226)
342 COG2008 GLY1 Threonine aldolas 99.2 4.9E-10 1.1E-14 122.1 18.1 247 625-898 8-268 (342)
343 PRK14903 16S rRNA methyltransf 99.2 4.1E-10 8.9E-15 130.3 18.6 150 29-210 236-390 (431)
344 TIGR01814 kynureninase kynuren 99.2 1.2E-09 2.7E-14 125.9 22.4 191 615-835 26-240 (406)
345 TIGR02716 C20_methyl_CrtF C-20 99.2 2.8E-10 6.1E-15 126.3 15.9 105 30-189 149-253 (306)
346 PF01276 OKR_DC_1: Orn/Lys/Arg 99.2 5.9E-10 1.3E-14 126.6 17.6 195 654-867 68-282 (417)
347 PRK06922 hypothetical protein; 99.2 2.7E-10 5.8E-15 133.9 15.2 120 30-191 418-538 (677)
348 PRK13942 protein-L-isoaspartat 99.2 4.9E-10 1.1E-14 117.7 15.1 76 29-121 75-151 (212)
349 KOG2899 Predicted methyltransf 99.2 2.1E-10 4.5E-15 117.7 11.8 151 21-206 49-225 (288)
350 PRK14121 tRNA (guanine-N(7)-)- 99.2 3.9E-10 8.4E-15 126.6 15.0 129 30-206 122-251 (390)
351 PRK11188 rrmJ 23S rRNA methylt 99.2 6.6E-10 1.4E-14 116.4 15.7 133 29-217 50-191 (209)
352 COG1104 NifS Cysteine sulfinat 99.1 3.6E-09 7.8E-14 117.7 22.1 190 628-846 12-218 (386)
353 TIGR00479 rumA 23S rRNA (uraci 99.1 4E-10 8.7E-15 130.9 15.2 151 3-214 264-419 (431)
354 PRK14901 16S rRNA methyltransf 99.1 9E-10 1.9E-14 127.9 18.1 149 30-210 252-408 (434)
355 KOG1270 Methyltransferases [Co 99.1 1.3E-10 2.9E-15 121.0 9.9 106 29-188 88-193 (282)
356 PF01170 UPF0020: Putative RNA 99.1 4.5E-10 9.8E-15 114.7 13.7 137 29-216 27-172 (179)
357 KOG1549 Cysteine desulfurase N 99.1 1.6E-09 3.5E-14 120.9 18.9 203 613-845 40-257 (428)
358 KOG0053 Cystathionine beta-lya 99.1 2.5E-09 5.5E-14 119.2 20.4 172 651-857 76-252 (409)
359 PRK04311 selenocysteine syntha 99.1 6.5E-09 1.4E-13 121.0 24.5 208 617-854 88-315 (464)
360 COG0626 MetC Cystathionine bet 99.1 5.8E-09 1.2E-13 117.7 23.2 167 651-852 62-234 (396)
361 TIGR00563 rsmB ribosomal RNA s 99.1 1E-09 2.2E-14 127.3 17.6 149 30-209 238-391 (426)
362 PRK00216 ubiE ubiquinone/menaq 99.1 1.6E-09 3.4E-14 115.2 17.6 106 30-189 51-157 (239)
363 COG1092 Predicted SAM-dependen 99.1 4.1E-10 9E-15 126.7 13.7 121 30-194 217-340 (393)
364 PF03848 TehB: Tellurite resis 99.1 6E-10 1.3E-14 113.9 12.8 104 29-189 29-132 (192)
365 PRK13580 serine hydroxymethylt 99.1 6.3E-09 1.4E-13 120.3 22.2 232 615-873 49-329 (493)
366 PF01212 Beta_elim_lyase: Beta 99.1 4.2E-10 9.1E-15 123.4 12.0 201 629-853 7-216 (290)
367 PRK06058 4-aminobutyrate amino 99.1 1.5E-08 3.3E-13 118.2 25.6 268 611-900 52-357 (443)
368 PRK08317 hypothetical protein; 99.1 1.4E-09 3.1E-14 115.2 15.6 106 29-190 18-124 (241)
369 PRK04457 spermidine synthase; 99.1 4.3E-10 9.3E-15 121.8 11.6 115 30-193 66-180 (262)
370 TIGR02072 BioC biotin biosynth 99.1 1.2E-09 2.6E-14 115.9 14.5 110 30-198 34-143 (240)
371 PRK05031 tRNA (uracil-5-)-meth 99.1 1.1E-09 2.3E-14 124.2 14.8 139 32-240 208-361 (362)
372 TIGR00474 selA seryl-tRNA(sec) 99.1 8.9E-09 1.9E-13 119.6 22.4 212 617-854 83-310 (454)
373 TIGR02021 BchM-ChlM magnesium 99.1 2.1E-09 4.5E-14 113.4 15.6 72 29-121 54-125 (219)
374 PLN02781 Probable caffeoyl-CoA 99.1 9.7E-10 2.1E-14 117.1 13.1 104 30-189 68-177 (234)
375 smart00650 rADc Ribosomal RNA 99.1 7.2E-10 1.5E-14 112.2 11.5 77 30-127 13-89 (169)
376 TIGR03840 TMPT_Se_Te thiopurin 99.1 6.9E-10 1.5E-14 116.4 11.6 142 30-214 34-186 (213)
377 PF02384 N6_Mtase: N-6 DNA Met 99.1 3.7E-09 8.1E-14 117.5 17.8 193 7-242 28-234 (311)
378 PRK05134 bifunctional 3-demeth 99.1 2.3E-09 4.9E-14 114.1 15.0 130 29-215 47-205 (233)
379 PF08242 Methyltransf_12: Meth 99.1 5.4E-11 1.2E-15 109.0 2.2 99 35-186 1-99 (99)
380 TIGR00438 rrmJ cell division p 99.1 2.6E-09 5.7E-14 110.0 14.9 133 28-217 30-172 (188)
381 PRK11088 rrmA 23S rRNA methylt 99.1 9.7E-10 2.1E-14 119.9 12.2 103 30-199 85-190 (272)
382 PF13489 Methyltransf_23: Meth 99.0 9.6E-10 2.1E-14 109.2 11.1 117 29-212 21-160 (161)
383 PLN02994 1-aminocyclopropane-1 99.0 7.6E-10 1.7E-14 109.7 9.7 93 613-707 41-152 (153)
384 PRK00312 pcm protein-L-isoaspa 99.0 2E-09 4.4E-14 113.0 13.4 74 30-122 78-151 (212)
385 COG2519 GCD14 tRNA(1-methylade 99.0 2E-09 4.4E-14 112.6 12.8 126 28-213 92-218 (256)
386 TIGR01983 UbiG ubiquinone bios 99.0 5.2E-09 1.1E-13 110.5 16.3 106 29-190 44-149 (224)
387 PLN03075 nicotianamine synthas 99.0 2.3E-09 4.9E-14 116.5 13.7 109 30-191 123-234 (296)
388 PRK05964 adenosylmethionine--8 99.0 3.7E-08 8.1E-13 114.3 24.7 246 611-874 38-321 (423)
389 TIGR01934 MenG_MenH_UbiE ubiqu 99.0 8.3E-09 1.8E-13 108.4 17.2 103 30-189 39-142 (223)
390 TIGR00709 dat 2,4-diaminobutyr 99.0 6.5E-08 1.4E-12 112.9 26.3 271 611-901 35-344 (442)
391 PRK03612 spermidine synthase; 99.0 3.2E-09 6.8E-14 125.8 15.5 143 30-216 297-444 (521)
392 TIGR03587 Pse_Me-ase pseudamin 99.0 1.8E-09 3.8E-14 112.7 11.6 70 30-122 43-112 (204)
393 TIGR02407 ectoine_ectB diamino 99.0 6.4E-08 1.4E-12 111.9 25.3 273 611-901 31-334 (412)
394 TIGR00095 RNA methyltransferas 99.0 4E-09 8.7E-14 108.6 13.7 83 29-127 48-133 (189)
395 PRK05785 hypothetical protein; 99.0 2.6E-09 5.7E-14 113.2 12.7 82 12-122 36-117 (226)
396 PRK00811 spermidine synthase; 99.0 4.1E-09 8.8E-14 115.5 14.5 140 30-217 76-221 (283)
397 PRK01581 speE spermidine synth 99.0 4.7E-09 1E-13 116.4 14.9 142 30-213 150-295 (374)
398 PF10672 Methyltrans_SAM: S-ad 99.0 2.9E-09 6.4E-14 115.6 12.9 131 30-207 123-256 (286)
399 COG0075 Serine-pyruvate aminot 99.0 8.9E-08 1.9E-12 107.5 24.9 197 628-853 15-215 (383)
400 KOG1271 Methyltransferases [Ge 99.0 2.4E-09 5.2E-14 105.4 10.9 136 32-214 69-204 (227)
401 TIGR02143 trmA_only tRNA (urac 99.0 6E-09 1.3E-13 117.6 15.5 139 32-240 199-352 (353)
402 KOG1368 Threonine aldolase [Am 99.0 1E-08 2.2E-13 108.0 15.4 222 629-873 34-270 (384)
403 PF05401 NodS: Nodulation prot 99.0 2.8E-09 6.1E-14 107.9 10.9 126 31-213 44-178 (201)
404 PRK09264 diaminobutyrate--2-ox 99.0 9.9E-08 2.1E-12 110.8 25.4 273 611-901 35-338 (425)
405 PRK15029 arginine decarboxylas 99.0 3.7E-08 8E-13 119.6 22.5 171 654-843 207-399 (755)
406 PRK03715 argD acetylornithine 99.0 1E-07 2.2E-12 109.5 24.8 260 612-899 33-315 (395)
407 PRK11705 cyclopropane fatty ac 99.0 3.5E-09 7.7E-14 120.6 12.5 102 29-190 166-267 (383)
408 PRK13255 thiopurine S-methyltr 99.0 3.6E-09 7.8E-14 111.4 11.5 141 30-214 37-189 (218)
409 PTZ00094 serine hydroxymethylt 99.0 5.8E-08 1.3E-12 113.6 22.6 207 614-850 33-263 (452)
410 PRK02769 histidine decarboxyla 98.9 1.2E-07 2.6E-12 108.2 24.3 180 650-852 63-252 (380)
411 PF05971 Methyltransf_10: Prot 98.9 2.1E-08 4.6E-13 108.9 16.9 186 4-211 71-278 (299)
412 COG2518 Pcm Protein-L-isoaspar 98.9 6.5E-09 1.4E-13 106.7 12.0 72 30-120 72-143 (209)
413 PLN03032 serine decarboxylase; 98.9 9.3E-08 2E-12 108.5 22.7 181 650-854 64-257 (374)
414 PRK13943 protein-L-isoaspartat 98.9 7.3E-09 1.6E-13 114.9 13.4 75 30-121 80-155 (322)
415 COG4122 Predicted O-methyltran 98.9 7.4E-09 1.6E-13 107.8 12.4 117 13-189 46-165 (219)
416 PLN02585 magnesium protoporphy 98.9 2E-08 4.4E-13 111.1 16.6 76 30-122 144-219 (315)
417 PLN02476 O-methyltransferase 98.9 8E-09 1.7E-13 111.7 12.9 104 30-189 118-227 (278)
418 cd02440 AdoMet_MTases S-adenos 98.9 1E-08 2.2E-13 92.3 11.7 103 33-189 1-103 (107)
419 PTZ00146 fibrillarin; Provisio 98.9 1.7E-08 3.6E-13 109.3 15.3 129 28-214 130-270 (293)
420 KOG3420 Predicted RNA methylas 98.9 2.4E-09 5.3E-14 101.5 7.4 83 29-130 47-129 (185)
421 PF08003 Methyltransf_9: Prote 98.9 1.6E-08 3.4E-13 108.7 14.5 155 6-217 91-269 (315)
422 PF05724 TPMT: Thiopurine S-me 98.9 5.7E-09 1.2E-13 109.7 11.0 154 13-215 25-190 (218)
423 COG2873 MET17 O-acetylhomoseri 98.9 9.8E-09 2.1E-13 111.5 12.7 158 652-844 62-223 (426)
424 smart00138 MeTrc Methyltransfe 98.9 4.7E-09 1E-13 113.8 10.5 126 30-192 99-244 (264)
425 PF02475 Met_10: Met-10+ like- 98.9 3.9E-09 8.3E-14 109.1 9.3 82 28-126 99-180 (200)
426 PF01135 PCMT: Protein-L-isoas 98.9 7.3E-09 1.6E-13 108.1 11.1 77 29-122 71-148 (209)
427 PRK06202 hypothetical protein; 98.9 6.2E-09 1.3E-13 110.8 10.9 77 30-126 60-140 (232)
428 TIGR02987 met_A_Alw26 type II 98.9 1.3E-08 2.8E-13 121.3 14.7 107 6-128 5-125 (524)
429 PRK08593 4-aminobutyrate amino 98.9 4.6E-07 1E-11 105.7 27.2 245 611-874 38-321 (445)
430 PRK06541 hypothetical protein; 98.9 6.3E-07 1.4E-11 105.0 27.4 269 611-900 48-364 (460)
431 PLN02336 phosphoethanolamine N 98.9 1.3E-08 2.9E-13 119.8 13.2 126 30-211 37-178 (475)
432 PF01596 Methyltransf_3: O-met 98.9 1E-08 2.2E-13 106.6 10.7 105 30-190 45-155 (205)
433 TIGR00417 speE spermidine synt 98.9 2.5E-08 5.4E-13 108.7 14.2 142 30-218 72-217 (270)
434 KOG1360 5-aminolevulinate synt 98.9 3.5E-07 7.5E-12 99.7 22.5 217 627-873 184-417 (570)
435 PLN03226 serine hydroxymethylt 98.9 5E-07 1.1E-11 106.0 25.9 202 615-846 34-261 (475)
436 PRK07580 Mg-protoporphyrin IX 98.9 3.5E-08 7.7E-13 104.5 14.5 73 29-122 62-134 (230)
437 PF03602 Cons_hypoth95: Conser 98.8 1.1E-08 2.5E-13 104.6 10.1 121 16-193 31-156 (183)
438 TIGR01788 Glu-decarb-GAD gluta 98.8 1.3E-07 2.8E-12 109.5 19.8 198 628-846 52-277 (431)
439 PF08704 GCD14: tRNA methyltra 98.8 4E-08 8.7E-13 104.7 14.2 129 28-214 38-170 (247)
440 KOG1359 Glycine C-acetyltransf 98.8 1.5E-07 3.2E-12 99.0 17.6 212 614-857 66-288 (417)
441 PLN02414 glycine dehydrogenase 98.8 5.8E-08 1.3E-12 121.0 17.2 177 647-852 563-755 (993)
442 COG4976 Predicted methyltransf 98.8 4.7E-09 1E-13 107.0 6.2 129 32-221 127-271 (287)
443 COG0076 GadB Glutamate decarbo 98.8 4.9E-07 1.1E-11 105.1 23.8 206 628-853 73-300 (460)
444 PRK13578 ornithine decarboxyla 98.8 2.3E-07 4.9E-12 111.8 21.5 173 654-845 176-370 (720)
445 PRK04338 N(2),N(2)-dimethylgua 98.8 2.6E-08 5.6E-13 113.2 12.8 100 31-189 58-157 (382)
446 PTZ00338 dimethyladenosine tra 98.8 1.3E-08 2.8E-13 111.8 9.8 81 29-129 35-115 (294)
447 PLN02366 spermidine synthase 98.8 6.4E-08 1.4E-12 106.9 14.8 117 30-192 91-208 (308)
448 PF02390 Methyltransf_4: Putat 98.8 3.7E-08 8.1E-13 101.9 12.2 135 32-212 19-157 (195)
449 PRK14896 ksgA 16S ribosomal RN 98.8 1.5E-08 3.2E-13 109.8 9.5 76 30-128 29-104 (258)
450 PRK15400 lysine decarboxylase 98.8 3.5E-07 7.6E-12 110.2 20.4 165 654-839 197-375 (714)
451 PRK00274 ksgA 16S ribosomal RN 98.8 2.5E-08 5.5E-13 108.8 9.8 76 30-127 42-117 (272)
452 COG0742 N6-adenine-specific me 98.7 1.5E-07 3.2E-12 95.2 14.0 126 15-194 31-158 (187)
453 PRK13256 thiopurine S-methyltr 98.7 6.8E-08 1.5E-12 101.6 12.0 115 30-188 43-161 (226)
454 COG0112 GlyA Glycine/serine hy 98.7 9.9E-07 2.1E-11 97.2 21.2 212 615-856 26-254 (413)
455 KOG4300 Predicted methyltransf 98.7 3.6E-08 7.9E-13 99.2 9.3 108 32-194 78-186 (252)
456 COG2521 Predicted archaeal met 98.7 2.9E-08 6.2E-13 101.6 8.7 136 29-214 133-276 (287)
457 KOG1541 Predicted protein carb 98.7 9.3E-08 2E-12 97.2 12.2 128 30-209 50-181 (270)
458 cd00611 PSAT_like Phosphoserin 98.7 6.8E-07 1.5E-11 101.4 20.5 191 627-853 8-214 (355)
459 PF09445 Methyltransf_15: RNA 98.7 2.7E-08 6E-13 99.0 8.0 79 32-127 1-81 (163)
460 PRK05769 4-aminobutyrate amino 98.7 3.3E-06 7.2E-11 98.5 26.6 245 611-874 50-334 (441)
461 TIGR02081 metW methionine bios 98.7 9.9E-08 2.1E-12 98.8 12.3 75 30-128 13-88 (194)
462 PRK11783 rlmL 23S rRNA m(2)G24 98.7 1.2E-07 2.5E-12 116.5 14.9 83 30-127 190-315 (702)
463 COG0116 Predicted N6-adenine-s 98.7 1.2E-07 2.7E-12 105.3 13.4 118 28-192 189-346 (381)
464 PF06838 Met_gamma_lyase: Meth 98.7 6.7E-07 1.4E-11 97.8 18.2 185 647-855 48-248 (403)
465 PLN02589 caffeoyl-CoA O-methyl 98.7 9.9E-08 2.1E-12 102.0 11.7 104 30-189 79-189 (247)
466 TIGR03372 putres_am_tran putre 98.7 4.7E-06 1E-10 97.0 26.2 245 611-874 71-341 (442)
467 PLN02271 serine hydroxymethylt 98.7 2.8E-06 6.1E-11 99.1 23.9 205 615-845 148-375 (586)
468 KOG2361 Predicted methyltransf 98.7 4.6E-08 1E-12 101.0 8.2 127 8-189 51-182 (264)
469 PRK15399 lysine decarboxylase 98.7 1.5E-06 3.4E-11 104.7 22.5 189 654-865 197-405 (713)
470 TIGR01364 serC_1 phosphoserine 98.7 2.2E-06 4.7E-11 97.0 22.3 187 629-852 3-205 (349)
471 COG2520 Predicted methyltransf 98.7 1.7E-07 3.7E-12 103.6 12.7 124 28-210 186-315 (341)
472 PLN02482 glutamate-1-semialdeh 98.7 6.2E-06 1.3E-10 96.8 26.2 265 611-899 95-385 (474)
473 PLN02724 Molybdenum cofactor s 98.6 4.3E-06 9.4E-11 104.5 25.9 214 617-853 35-284 (805)
474 TIGR02617 tnaA_trp_ase tryptop 98.6 3.5E-06 7.5E-11 95.8 22.3 240 616-873 42-318 (467)
475 PLN02263 serine decarboxylase 98.6 3.1E-06 6.7E-11 98.0 22.1 183 649-853 130-323 (470)
476 COG4992 ArgD Ornithine/acetylo 98.6 2.8E-06 6E-11 94.9 20.8 265 610-899 37-321 (404)
477 PRK12389 glutamate-1-semialdeh 98.6 1.2E-05 2.5E-10 93.7 26.9 266 611-899 49-339 (428)
478 COG1103 Archaea-specific pyrid 98.6 3E-06 6.5E-11 88.5 19.2 199 629-856 29-243 (382)
479 COG2265 TrmA SAM-dependent met 98.6 3.1E-07 6.8E-12 105.6 13.3 124 30-213 293-418 (432)
480 PRK00615 glutamate-1-semialdeh 98.6 7.1E-06 1.5E-10 95.3 24.3 264 611-897 49-338 (433)
481 KOG1499 Protein arginine N-met 98.6 2E-07 4.4E-12 101.7 10.7 79 25-121 55-133 (346)
482 PRK11522 putrescine--2-oxoglut 98.6 1.3E-05 2.8E-10 93.9 26.2 268 611-900 78-372 (459)
483 PF05958 tRNA_U5-meth_tr: tRNA 98.6 2.4E-07 5.1E-12 104.7 11.0 139 32-240 198-351 (352)
484 PF00464 SHMT: Serine hydroxym 98.6 9.5E-07 2.1E-11 100.3 15.5 211 616-856 21-270 (399)
485 PLN02590 probable tyrosine dec 98.6 2.8E-05 6E-10 92.2 28.3 190 647-852 165-378 (539)
486 PRK11933 yebU rRNA (cytosine-C 98.5 9.6E-07 2.1E-11 102.7 15.1 147 29-207 112-262 (470)
487 PRK05355 3-phosphoserine/phosp 98.5 5.2E-06 1.1E-10 94.4 20.8 213 627-874 12-252 (360)
488 KOG1500 Protein arginine N-met 98.5 3.4E-07 7.3E-12 97.8 10.2 76 28-122 175-250 (517)
489 PRK12403 putative aminotransfe 98.5 2.3E-05 4.9E-10 92.0 26.6 245 611-874 50-341 (460)
490 PF05185 PRMT5: PRMT5 arginine 98.5 4E-07 8.7E-12 105.4 11.7 75 30-121 186-264 (448)
491 PRK07046 aminotransferase; Val 98.5 2E-05 4.3E-10 92.3 25.5 261 611-900 71-363 (453)
492 PLN02823 spermine synthase 98.5 9.5E-07 2E-11 98.7 13.8 119 30-192 103-222 (336)
493 PF00202 Aminotran_3: Aminotra 98.5 6.4E-06 1.4E-10 92.8 20.5 269 611-901 12-316 (339)
494 PRK05965 hypothetical protein; 98.5 1.8E-05 3.8E-10 92.9 24.8 269 611-900 42-361 (459)
495 TIGR00755 ksgA dimethyladenosi 98.5 3.8E-07 8.3E-12 98.5 10.0 75 30-127 29-106 (253)
496 PLN02760 4-aminobutyrate:pyruv 98.5 2.2E-05 4.8E-10 92.9 25.6 267 611-900 85-406 (504)
497 KOG1357 Serine palmitoyltransf 98.5 1.9E-06 4.2E-11 95.8 15.3 196 648-870 178-389 (519)
498 COG1982 LdcC Arginine/lysine/o 98.5 5.6E-06 1.2E-10 96.3 19.8 168 654-844 72-246 (557)
499 PRK06082 4-aminobutyrate amino 98.5 3.2E-05 7E-10 90.7 26.5 268 612-900 69-367 (459)
500 TIGR03799 NOD_PanD_pyr putativ 98.5 1.5E-05 3.3E-10 94.4 23.4 191 647-854 124-357 (522)
No 1
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=2.7e-205 Score=1850.72 Aligned_cols=895 Identities=77% Similarity=1.239 Sum_probs=818.9
Q ss_pred CcccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccc
Q 043334 1 MMVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALD 80 (903)
Q Consensus 1 ~~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~ 80 (903)
++|.|+|||||+|++.+.+.|...++..+++.+|||+|||+|.+++.+++.++..+|+|+|+|+++++.|++|++.|+++
T Consensus 89 ~~V~p~VLIPRpeTE~lve~L~~~~~~~~~~~~VLDlG~GSG~Iai~La~~~~~~~v~avDis~~Al~~A~~Na~~n~l~ 168 (1082)
T PLN02672 89 MMEIPSIFIPEDWSFTFYEGLNRHPDSIFRDKTVAELGCGNGWISIAIAEKWLPSKVYGLDINPRAVKVAWINLYLNALD 168 (1082)
T ss_pred eeeCCCcccCchhHHHHHHHHHhcccccCCCCEEEEEecchHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCcc
Confidence 57999999999999999999877666556678999999999999999999988889999999999999999999999875
Q ss_pred cCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccc
Q 043334 81 EKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFV 160 (903)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v 160 (903)
+.+.+.++.+++.+.++++++++|+.+......++||+||+||||+..++...+.+++.++.|++|+++++|++++++++
T Consensus 169 ~~~~~~~~~~~~~l~~rV~f~~sDl~~~~~~~~~~fDlIVSNPPYI~~~e~~~l~~eV~~~ep~~~~~~~~p~~AL~g~~ 248 (1082)
T PLN02672 169 DDGLPVYDGEGKTLLDRVEFYESDLLGYCRDNNIELDRIVGCIPQILNPNPEAMSKLVTENASEEFLYSLSNYCALQGFV 248 (1082)
T ss_pred cccccccccccccccccEEEEECchhhhccccCCceEEEEECCCcCCCcchhhcChhhhhccccccccccCccccccCCC
Confidence 44444555555556678999999999876433237999999999999999888999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeec
Q 043334 161 EDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEK 240 (903)
Q Consensus 161 ~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~ 240 (903)
++.+|+++++++++++.++|+|||.++++++..+++...++++++.||+...+|+.++.|+ .++||++++++||
T Consensus 249 ~g~dGL~~yr~i~~~a~~~L~pgG~l~lEiG~~q~~~v~~~l~~~~gf~~~~~~~~~~~~~------~~~~~~~~~~~~~ 322 (1082)
T PLN02672 249 EDQFGLGLIARAVEEGISVIKPMGIMIFNMGGRPGQAVCERLFERRGFRITKLWQTKINQA------ADTDISALVEIEK 322 (1082)
T ss_pred CCCcHHHHHHHHHHHHHHhccCCCEEEEEECccHHHHHHHHHHHHCCCCeeEEeeehhhhc------cccchHHHHHHhh
Confidence 9999999999999999999999999999999999988754699999999999999999999 9999999999999
Q ss_pred cCCcceeEEecccCCCcccHHHHHHhhhcCcceeeeeeeeeccccCchhHHHHHHHHhcccccccccccccccccccccc
Q 043334 241 NSPHRFEFFMGLSGDLPICARTAWAYGKAGGRISHALSVYSCQLHQPNQVKKIFKFLKNGFHEISSSLDLSFEDDSVADE 320 (903)
Q Consensus 241 ~~~~~f~f~~~~~~~~p~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~d~~~~~~~~~~~ 320 (903)
|++|+|||||++++++|+||||||+|+|+||+|+|++|||+||+++|+|+|+|++|||+||+++++++||+|+|+++++|
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (1082)
T PLN02672 323 NSRHRFEFFMGLVGDQPICARTAWAYGKAGGRISHALSVYSCQLRQPNQVKTIFKFLKNGFHEVSGSLDLSFEDESVADE 402 (1082)
T ss_pred cCccceeeeeccCCCCchhHHHHHHHHhcCCccchhhhhhhhhhcCchHHHHHHHHHHccchhhhhhccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHhhcCCCCCCCCCCcChhHHHHHHHHhhhcCcccCCCCceEEecchHHHHHHhhhhcccceeeecccccc
Q 043334 321 KIPFLAYLASVLKERSFFPYEPPAGSKRFRNLIADFMKKYHHIPLNADNVVVFPSRAVAIENALRLFSPRLAIVDERLTR 400 (903)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (903)
||+|+|+||++||++|||||||||||++||||||||||+|||||||+|||||||||||||||+||||||||||||||+||
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1082)
T PLN02672 403 KIPFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTR 482 (1082)
T ss_pred hccHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhhhcccCCCCCCCCCCeeEEeeCCcchhHHHHHHHhcCCeEEEeecccchhccHHHHHHHHHHHhhccceEEe
Q 043334 401 HLPKHWLTSLTIKGTDTENSSEHELTVIEAPRQSDLMVELIKKLKPQVVISGIGDFEAVTSSAFVHLLDVTREVGSRLFL 480 (903)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 480 (903)
||||+|||+|++|++.++++++++|||||||||||||||||||+|||||||||++||++||+||||||++|+++|+||||
T Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (1082)
T PLN02672 483 WLPKKWLTSLAIENATSDSKSDDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFL 562 (1082)
T ss_pred cCCHHHHhHhhhhcccccCccCCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccccccCCCchhHhhhhhcCCCCchhHhhhhhhcccccCCceeeeeccchHHHHHHhhhhhhhhccchhhhhHhhH
Q 043334 481 DISDHFELSSLPSSNGVLKYLAGNVLPSHAAVICGLVKNQVYSDLEVAFLISEEEAIFKALSKTVEVLEGTTALISQNYY 560 (903)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 560 (903)
||||||||||+|+||||||||||++|||||+|||||||||||+||||||+|||++++++||+||+||||||||+++|+||
T Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (1082)
T PLN02672 563 DISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEVLEGRTAIISQFYY 642 (1082)
T ss_pred ehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHhhccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhcccCCCccchhhHHhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHH
Q 043334 561 GCLFHELLAFQLAERHTHKERDCEKAKSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFES 640 (903)
Q Consensus 561 ~~~~~~~l~~~~~~~~~~~~r~~~~~~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~a 640 (903)
||+|||||+||+++|||+++|.+++..+.++.+++.+....+..++..+....++++|+|++|+|++++|+.+++++.++
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~vI~LsinE~d~ppPp~V~eAi~ea 722 (1082)
T PLN02672 643 GCLFHELLAFQLADRHTPQERLPEEEESSKFIGFSSSARSALKEAELSVSGSQESSLIHMDVDESFLPVPSAVKASIFES 722 (1082)
T ss_pred HHHHHHHHhccCCCCCCCccccchhhhhHhhhCCCchhHHHHHhcccCCcccCCCCEEEEeCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987655444556789999999999999999999999988
Q ss_pred HHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEE
Q 043334 641 FARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANI 720 (903)
Q Consensus 641 l~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~v 720 (903)
+.++....|++++++++++++++++|++.+++++|++|+|+++++..++.++++|||.|+++.|+|+.|...++..|+++
T Consensus 723 l~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~v 802 (1082)
T PLN02672 723 FVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANF 802 (1082)
T ss_pred HhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEE
Confidence 76665567889999999999999999998765689999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCC
Q 043334 721 VNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWG 800 (903)
Q Consensus 721 v~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s 800 (903)
+.+|++++++|.+|++.+++++++.+++++++++|||||||.++|.+++++|+++|++||++||+||+|+++.|++..++
T Consensus 803 v~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s 882 (1082)
T PLN02672 803 RRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWG 882 (1082)
T ss_pred EEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCc
Confidence 99999866789999999999987644458999999779999999999999999999999999999999999999775432
Q ss_pred CCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccc
Q 043334 801 GWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKA 880 (903)
Q Consensus 801 ~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~ 880 (903)
.+++.+....++... ++.++|+++||||.|++||||+||++++++.+++.+.+......++...|.++..++.......
T Consensus 883 ~~sl~s~l~~~~~~s-ks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~ 961 (1082)
T PLN02672 883 GWDLKSILSRLKSSN-PSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKS 961 (1082)
T ss_pred ccchhhHHHHhcccc-CCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccC
Confidence 233333333332210 1248999999999999999999999998766899998875555555567777766663111011
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh
Q 043334 881 RDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 881 ~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
..+.+++.+.++.|++||+++.
T Consensus 962 ~~~~~~l~e~r~~Lk~rRd~L~ 983 (1082)
T PLN02672 962 SDLLDGVAEQKKILKSRAERLK 983 (1082)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 2456788899999999999875
No 2
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-44 Score=408.33 Aligned_cols=272 Identities=18% Similarity=0.287 Sum_probs=242.8
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
.++|+|++|+|++++|+.+.+++.+++.. |.+..|.++||+++++++.+++|+..+++++|++|+|+++++..++.
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~ 107 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL 107 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence 68999999999999999999999998764 55789999999999999999999999888679999999999999999
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCC-CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESE-VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~-~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
++++|||+|++++|+|+.|...++.+|++++.++++.+ ++|.+|++.|++++++++ ++|++++|| ||||.+++++++
T Consensus 108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~kt-k~i~ln~P~-NPTGav~~~~~l 185 (393)
T COG0436 108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKT-KAIILNSPN-NPTGAVYSKEEL 185 (393)
T ss_pred HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccc-eEEEEeCCC-CCcCcCCCHHHH
Confidence 99999999999999999999999999999999998755 489999999999999977 599999998 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCC-CCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYE-GWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~-~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
++|+++|++||++||+||+|.++.|++. .++ +..+... .+++|+++||||+|+|+|||+||++++++++
T Consensus 186 ~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s-------~~~~~~~---~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l 255 (393)
T COG0436 186 KAIVELAREHDIIIISDEIYEELVYDGAEHPS-------ILELAGA---RDRTITINSFSKTYGMTGWRIGWVVGPPEEL 255 (393)
T ss_pred HHHHHHHHHcCeEEEEehhhhhcccCCCCcCC-------HhhcCCC---cceEEEEecccccccccccceeEeecChHHH
Confidence 9999999999999999999999999985 432 2222221 1589999999999999999999999995559
Q ss_pred HHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHhC
Q 043334 849 VDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLKE 903 (903)
Q Consensus 849 i~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~e 903 (903)
++.+.+++. .++++.++|.++..+|. +. +. ..+++.+++.|++||+++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~Q~aa~~aL~--~~--~~-~~~~~~~~~~~~~rrd~l~~ 307 (393)
T COG0436 256 IAALRKLKSYLTSCAPTPAQYAAIAALN--GP--QS-DEVVEEMREEYRERRDLLVE 307 (393)
T ss_pred HHHHHHHHHhcccCCCHHHHHHHHHHhc--Cc--cc-hHHHHHHHHHHHHHHHHHHH
Confidence 999987765 77999999999999994 33 12 36788888999999999863
No 3
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-41 Score=364.53 Aligned_cols=298 Identities=13% Similarity=0.167 Sum_probs=252.1
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEE-ccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIH-MDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYI 661 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~Id-Ls~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l 661 (903)
++++....++.+..+.+... +.. ..+ |+.|.|++++|+.+.+++.+++. +|...+|.++++++|++.+
T Consensus 9 ~~~l~~~~~~vw~e~~~la~---e~~---~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~ 82 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAA---EHK---VPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAY 82 (420)
T ss_pred cccccccCCcHHHHHHHHHH---hcC---CCCcccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHH
Confidence 34455556667777775432 122 222 99999999999999999988765 4777899999999999999
Q ss_pred HhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCC------CCCCcccCH
Q 043334 662 KSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTE------SEVGFKMTE 735 (903)
Q Consensus 662 ~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~------~~~~f~ld~ 735 (903)
+..+|...+|+++|+||+|+.+++..++++++++||+|++.+|.|..|....+.+|++++.+++. ..++|.+|+
T Consensus 83 se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~ 162 (420)
T KOG0257|consen 83 SEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDP 162 (420)
T ss_pred HHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCCh
Confidence 99999988888899999999999999999999999999999999999999999999999999998 446899999
Q ss_pred HHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCC
Q 043334 736 KTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSST 815 (903)
Q Consensus 736 ~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~ 815 (903)
+.++.++++++ ++|++|+|| ||||.++|+++|++|+++|++||++||.||+|..+.|++..+ . .+..++++.
T Consensus 163 ~~le~~~t~kT-k~Ii~ntPh-NPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h--~----r~aslPgm~ 234 (420)
T KOG0257|consen 163 EELESKITEKT-KAIILNTPH-NPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKH--I----RIASLPGMY 234 (420)
T ss_pred HHHHhhccCCc-cEEEEeCCC-CCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcc--e----eeecCCchh
Confidence 99999999998 499999998 999999999999999999999999999999999999999865 1 233446664
Q ss_pred CCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccc-cchhHHHHHHHHHH
Q 043334 816 NSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRER-KARDLMNAVAEHIR 892 (903)
Q Consensus 816 ~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~-~~~~~~~~l~~~r~ 892 (903)
+++|.++||||+||++|||+||+++++. ++.....+++ ...++++.|.|...++..... ..-+-..++.++.+
T Consensus 235 ---ertitvgS~gKtf~~TGWrlGW~igp~~-L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~ 310 (420)
T KOG0257|consen 235 ---ERTITVGSFGKTFGVTGWRLGWAIGPKH-LYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVK 310 (420)
T ss_pred ---heEEEeccccceeeeeeeeeeeeechHH-hhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHH
Confidence 6999999999999999999999999766 9998888876 667889999999999853221 00000145667999
Q ss_pred HHHHHHHHHhC
Q 043334 893 NLESRSKRLKE 903 (903)
Q Consensus 893 ~y~~Rr~~l~e 903 (903)
.|++||++|++
T Consensus 311 ~y~~krdil~k 321 (420)
T KOG0257|consen 311 EYKEKRDILAK 321 (420)
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 4
>PLN02368 alanine transaminase
Probab=100.00 E-value=4.7e-39 Score=367.94 Aligned_cols=310 Identities=12% Similarity=0.123 Sum_probs=242.4
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCC--------C----------------------CCcHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSF--------L----------------------PIPSLVKAA 636 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~--------~----------------------~~p~~v~~a 636 (903)
+|.++.+++.+.+..+...... ++..+.++|+|++|+|+ + .+++.+.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~-~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a 89 (407)
T PLN02368 11 LNENVKKCQYAVRGELYLRASE-LQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARA 89 (407)
T ss_pred cCHHHHhhhhhcCCHHHHHHHH-HHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHH
Confidence 5677777777776665532111 23467899999999997 3 155556555
Q ss_pred HHHHH------HccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc-cCCCeEEEcCCCcHHH
Q 043334 637 IFESF------ARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI-LEGGTLCFPAGSNGNY 709 (903)
Q Consensus 637 l~~al------~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~-~pGD~Vlv~~P~y~~~ 709 (903)
+.... ..|....|.+++|+++++++++++|++.+++ +|++|+|+++++..++.+++ +|||.|++++|+|+.|
T Consensus 90 ~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y 168 (407)
T PLN02368 90 KHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLY 168 (407)
T ss_pred HHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChh-hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccH
Confidence 54421 1266678999999999999999889888877 99999999999999999987 7999999999999999
Q ss_pred HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc------CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEE
Q 043334 710 VSAARFLKANIVNIPTESEVGFKMTEKTLVTILET------VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARV 783 (903)
Q Consensus 710 ~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~------~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~V 783 (903)
...++..|++++.++++++++|.+|++.+++.+++ ++ ++++++||+ ||||.++|.+++++|+++|+++|++|
T Consensus 169 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~-k~l~l~nP~-NPTG~v~s~e~l~~l~~~a~~~~~~I 246 (407)
T PLN02368 169 SATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITV-RAMVIINPG-NPTGQCLSEANLREILKFCYQERLVL 246 (407)
T ss_pred HHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCe-EEEEEECCC-CCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999998777899999999998864 33 589999997 99999999999999999999999999
Q ss_pred EEecCCCCCccCCCCCCCCchhhhhhhhcc-CCCCCCceEEEccCchhc-ccccceeeEEEe---CcHHHHHHHHhCCC-
Q 043334 784 VIDTAFSGLEFNYEGWGGWDLEGCLSKLYS-STNSSFNVSLLGGLSLKM-LTGALKFGFLVL---NHPQLVDAFSSFPG- 857 (903)
Q Consensus 784 I~DeaY~~l~f~~~~~s~~s~~~~~~~l~~-~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~---~~~~li~~l~~~~~- 857 (903)
|+||+|.++.|++... +.++.+....++. .. ..+++|+++||||+| |+||||+||+++ +++ +++++.+...
T Consensus 247 I~DE~Y~~l~y~~~~~-~~s~~~~~~~~~~~~~-~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~-li~~~~~~~~~ 323 (407)
T PLN02368 247 LGDEVYQQNIYQDERP-FISAKKVLMDMGPPIS-KEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPK-TVEEIYKVASI 323 (407)
T ss_pred EEEccccccccCCCCC-cccHHHHHhhhccccc-ccceEEEEecCCcccccCCccceEEEEEeCCCHH-HHHHHHHHhcc
Confidence 9999999999976421 1222222212211 00 014899999999999 899999999995 555 9999988753
Q ss_pred CCCCcHHHHHHHHHHHhccc-c--cchhHHHHHHHHHHHHHHHHHHHhC
Q 043334 858 LSKPHSTVRYAIKKLLGLRE-R--KARDLMNAVAEHIRNLESRSKRLKE 903 (903)
Q Consensus 858 ~~~~s~~~Q~aa~~~L~~~~-~--~~~~~~~~l~~~r~~y~~Rr~~l~e 903 (903)
.+++++++|.++..+|.... + ..+.+.+++..+++.|++||+++++
T Consensus 324 ~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 372 (407)
T PLN02368 324 ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTD 372 (407)
T ss_pred cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999994111 1 0012334456678999999998863
No 5
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=363.84 Aligned_cols=289 Identities=16% Similarity=0.214 Sum_probs=250.6
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
+++++.+++.+.++.+.... .+.++|+|+.|.|++++|+.+.+++.+++.+ |.+..|.+++|++++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~ 105 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLA------IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFK 105 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHh------hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHH
Confidence 67788888888887776542 2347999999999999999999988887653 6667899999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|++.+++.+|++|+|+++++..++.++++|||+|++++|+|+.|...++..|++++.++++.+ +|.+|++.|++.+
T Consensus 106 ~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l~~~~ 184 (413)
T PLN00175 106 KDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDELKAAF 184 (413)
T ss_pred HHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHHHHhc
Confidence 999998887657999999999999999999999999999999999999999999999999999754 4889999999998
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
.+++ +++++++|+ ||||.++|.+++++|+++|++++++||+||+|.++.|++...+ +..+++. .+++|
T Consensus 185 ~~~~-k~i~i~~p~-NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s-------~~~~~~~---~~~vi 252 (413)
T PLN00175 185 TSKT-RAILINTPH-NPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHIS-------MASLPGM---YERTV 252 (413)
T ss_pred CcCc-eEEEecCCC-CCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccC-------hhhCCCC---cCcEE
Confidence 8766 589999998 9999999999999999999999999999999999999764321 2223332 15899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.|++||||+||++++++ +++.+.+... ..+++.+.|.++..+|. ++ +.+++++++.|++|+++
T Consensus 253 ~i~SfSK~~~~~G~RiG~~v~~~~-l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~ 324 (413)
T PLN00175 253 TMNSLGKTFSLTGWKIGWAIAPPH-LTWGVRQAHSFLTFATATPMQWAAVAALR--AP-----ESYYEELKRDYSAKKDI 324 (413)
T ss_pred EEecchhhccCcchheeeeEeCHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHh--CC-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987 9998887764 67889999999999994 33 36889999999999998
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
++
T Consensus 325 l~ 326 (413)
T PLN00175 325 LV 326 (413)
T ss_pred HH
Confidence 75
No 6
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-38 Score=362.19 Aligned_cols=307 Identities=18% Similarity=0.210 Sum_probs=250.1
Q ss_pred HhhHhhHHHHHHHHHhhcccCCCccchhhHHhhhhccCCCCHHHHHHHHhhhh-ccCCCCCeEEccCCCCCCCCcHHHHH
Q 043334 557 QNYYGCLFHELLAFQLAERHTHKERDCEKAKSTEMIGFSRSAISVLNSAELSI-TETPNSGLIHMDVDQSFLPIPSLVKA 635 (903)
Q Consensus 557 ~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~s~~~~~l~~s~i~~l~~a~~a~-~~~~~~~~IdLs~g~p~~~~p~~v~~ 635 (903)
+.|++++|++++. ++... +....+.+..+.....+. ...++.++|+|+.|+|++++++.+.+
T Consensus 2 ~~~~~~~~~~~~~----------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~ 64 (410)
T PRK06290 2 ESYIQNLFAERIG----------GKNFG-------KETVIYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVE 64 (410)
T ss_pred hhHHHHHHHHHhc----------Ccccc-------ccCchhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHH
Confidence 3588999988766 22222 122233455555432221 12356679999999999999999998
Q ss_pred HHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCC-CCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH
Q 043334 636 AIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFP-IDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY 709 (903)
Q Consensus 636 al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~-~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~ 709 (903)
++.+.+.. |. ..|.+++|+++++++++.+|+. .+++++|++|+|+++++..++.+++++||.|++++|+|+.|
T Consensus 65 ~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~ 143 (410)
T PRK06290 65 VLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVT 143 (410)
T ss_pred HHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccH
Confidence 88876532 43 4789999999999999988987 77755799999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCC
Q 043334 710 VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAF 789 (903)
Q Consensus 710 ~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY 789 (903)
...++..|++++.++++++++|.+|++.+++.+.+++ ++|++++|| ||||.++|.+++++|+++|+++|++||+||+|
T Consensus 144 ~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~-k~i~l~nP~-NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY 221 (410)
T PRK06290 144 GTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKA-KLLYLNYPN-NPTGAVATKEFYEEVVDFAKENNIIVVQDAAY 221 (410)
T ss_pred HHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccc-eEEEEECCC-CCCCcCCCHHHHHHHHHHHHHcCeEEEEecch
Confidence 9999999999999999877789999999998887665 599999998 99999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHH
Q 043334 790 SGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRY 867 (903)
Q Consensus 790 ~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~ 867 (903)
.++.|++...+ +. .+.... +++|+++||||.||+||+|+||++++++ +++.+.+... ..+++.++|.
T Consensus 222 ~~~~~~~~~~s------~~-~~~~~~---~~~I~i~SfSK~~g~~GlRiG~ii~~~~-l~~~l~~~~~~~~~~~~~~~q~ 290 (410)
T PRK06290 222 AALTFDGKPLS------FL-SVPGAK---EVGVEIHSLSKAYNMTGWRLAFVVGNEL-IVKAFATVKDNNDSGQFIAIQK 290 (410)
T ss_pred hhceeCCCCcC------hh-cCCCcc---ccEEEEeechhhcCCchhheEeEEeCHH-HHHHHHHHHhccccCCcHHHHH
Confidence 99988764321 11 122221 4789999999999999999999999887 9999987765 5566678999
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 868 AIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 868 aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++..+|+ ++ .+++++++.|++|++.+.
T Consensus 291 aa~~~l~--~~------~~~~~~~~~~~~~~~~l~ 317 (410)
T PRK06290 291 AGIYALD--HP------EITEKIREKYSRRLDKLV 317 (410)
T ss_pred HHHHHhh--Cc------HHHHHHHHHHHHHHHHHH
Confidence 9999994 33 567888999999988775
No 7
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=2.6e-38 Score=361.28 Aligned_cols=296 Identities=16% Similarity=0.163 Sum_probs=240.0
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~ 662 (903)
++++..++.+.+..+..+.. ..+..+.++|+|+.|+|++++++.+.+++.+.+.. |....|.+++|+++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 82 (388)
T PRK07366 4 AQRLQPLQSNVFADMDRAKA-QARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYE 82 (388)
T ss_pred hhhhhcCCccHHHHHHHHHH-HHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHH
Confidence 44555556555555443221 11346778999999999999999999998887642 5566899999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|+..+++.+|++|+|+++++..++.++++|||.|++++|+|+.|...++..|++++.+|++.+++|.+|++.+.+.+
T Consensus 83 ~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 162 (388)
T PRK07366 83 QRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEV 162 (388)
T ss_pred HhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhh
Confidence 98998888764699999999999999999999999999999999999999999999999999987678999999998877
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
.+++ +++++++|| ||||.++|.+++++|+++|+++|++||+||+|.++.|++... .. + +..++.. .+++|
T Consensus 163 ~~~~-k~i~l~~p~-NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~-~~---~-~~~~~~~---~~~vi 232 (388)
T PRK07366 163 LAQA-RLMVLSYPH-NPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVE-PP---S-ILQADPE---KSVSI 232 (388)
T ss_pred cccc-eEEEEeCCC-CCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCC-CC---C-hhhCCCC---cccEE
Confidence 6655 599999997 999999999999999999999999999999999999876431 01 1 2222222 14799
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||+||+||+|+||++++++ +++++.++.. ..+.++..|.++...|. +. ++|++++++.|++||+.
T Consensus 233 ~~~SfSK~~g~~GlRiG~~v~~~~-li~~l~~~~~~~~~~~~~~~~~~a~~~l~--~~-----~~~l~~~~~~~~~~r~~ 304 (388)
T PRK07366 233 EFFTLSKSYNMGGFRIGFAIGNAQ-LIQALRQVKAVVDFNQYRGILNGAIAALT--GP-----QATVQQTVQIFRQRRDA 304 (388)
T ss_pred EEeecccccCCcchhheehcCCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 9999988765 33333444555666662 22 37899999999999998
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 305 l~ 306 (388)
T PRK07366 305 FI 306 (388)
T ss_pred HH
Confidence 75
No 8
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=3.8e-38 Score=360.88 Aligned_cols=300 Identities=14% Similarity=0.195 Sum_probs=244.7
Q ss_pred hhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhhc
Q 043334 589 TEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSNF 665 (903)
Q Consensus 589 ~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~~ 665 (903)
+++.+++.+.+..+...........|.++|+|+.|+|++++++.+.+++.+.+. .|....|.+++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~ 82 (396)
T PRK09147 3 PRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRY 82 (396)
T ss_pred chhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHh
Confidence 345566666776666432211124678999999999999989888888877544 37777899999999999999989
Q ss_pred CCC-CCCCCcEEecCchHHHHHHHHHHhccC---CCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHH
Q 043334 666 GFP-IDINAEFIYADCSQSLFNKLVLCCILE---GGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTI 741 (903)
Q Consensus 666 G~~-~~pe~~I~vt~Gs~~al~~ll~~l~~p---GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~ 741 (903)
|.+ .+++++|++|+|+++++..++.++++| ||.|++++|+|+.|..+++..|++++.+|++++++|.+|++++++.
T Consensus 83 g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~ 162 (396)
T PRK09147 83 GLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAE 162 (396)
T ss_pred CCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHH
Confidence 987 777558999999999999999999999 8999999999999999999999999999998777899999999888
Q ss_pred hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 742 LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 742 l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
+.+++ ++++++||+ ||||.++|.+++++|+++|++++++||+||+|.++.|++...+ .+.......+.... .+++
T Consensus 163 ~~~~~-k~i~l~nP~-NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~v 237 (396)
T PRK09147 163 VWART-QLLFVCSPG-NPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPP-LGLLEAAAELGRDD--FKRL 237 (396)
T ss_pred Hhhcc-EEEEEcCCC-CCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCC-chhhhhccccCccc--cccE
Confidence 76655 589999997 9999999999999999999999999999999999988763211 11100011111100 1589
Q ss_pred EEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 822 SLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 822 I~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
|+++||||.|++||+|+||+++++. +++.+.+... ..+++.+.|.++...+. . ++++.+.++.|++|++
T Consensus 238 i~~~S~SK~~~~~GlRiG~~~~~~~-l~~~~~~~~~~~~~~~~~~~q~a~~~~~~--~------~~~~~~~~~~~~~~~~ 308 (396)
T PRK09147 238 VVFHSLSKRSNVPGLRSGFVAGDAA-LLKKFLLYRTYHGCAMPPAVQAASIAAWN--D------EAHVRENRALYREKFD 308 (396)
T ss_pred EEEeccccccCCccceeeeecCCHH-HHHHHHHHhhhcccCCCHHHHHHHHHHhc--c------hhHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 9998887664 46788899999888883 2 2678889999999998
Q ss_pred HHh
Q 043334 900 RLK 902 (903)
Q Consensus 900 ~l~ 902 (903)
.++
T Consensus 309 ~~~ 311 (396)
T PRK09147 309 AVT 311 (396)
T ss_pred HHH
Confidence 875
No 9
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-38 Score=360.02 Aligned_cols=295 Identities=14% Similarity=0.165 Sum_probs=245.4
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCC-CCCchHHHHHHHHHHHh
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNM-SESEIDVTPSIQQYIKS 663 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~-~~G~~~lr~ala~~l~~ 663 (903)
++++....++.+..+...... ....++++|+|+.|+|++++++.+.+++.+.+.. |++ ..|.+++|+++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~ 84 (399)
T PRK07681 6 ATRMKAFQSSIFSELGAYKKE-KIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNN 84 (399)
T ss_pred hHHHhhcCccHHHHHHHHHHH-hhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHH
Confidence 344555555666665532110 1235678999999999999999999998887643 433 47899999999999999
Q ss_pred hcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh
Q 043334 664 NFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 664 ~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
++|++.+++++|++|+|+++++..++.+++++||.|++++|+|+.|...++..|++++++|++++++|.+|++.+++.+.
T Consensus 85 ~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~ 164 (399)
T PRK07681 85 THNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA 164 (399)
T ss_pred HhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc
Confidence 89998887339999999999999999999999999999999999999999999999999999877789999999998887
Q ss_pred cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 744 TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
+++ +++++++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.|++... .+ +..++.. .+++|+
T Consensus 165 ~~~-k~v~l~~P~-NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~--~~----~~~~~~~---~~~~i~ 233 (399)
T PRK07681 165 DKA-KMMILNFPG-NPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKP--IS----FLSVPGA---KEVGVE 233 (399)
T ss_pred ccc-eEEEEeCCC-CCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCC--CC----hhhCCCC---cccEEE
Confidence 666 599999997 999999999999999999999999999999999999876532 11 1122222 148999
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++||||.||+||+|+||++++++ +++++.+... ..+++.+.|.++..+|. ++ ..++++.++.|++|++.+
T Consensus 234 ~~S~SK~~~~~GlRiG~~i~~~~-l~~~~~~~~~~~~~~~s~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~l 305 (399)
T PRK07681 234 INSLSKSYSLAGSRIGYMIGNEE-IVRALTQFKSNTDYGVFLPIQKAACAALR--NG-----AAFCEKNRGIYQERRDTL 305 (399)
T ss_pred EeecccccCCccceeEEEecCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887 9999988764 56789999999999994 33 267888899999999887
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 306 ~ 306 (399)
T PRK07681 306 V 306 (399)
T ss_pred H
Confidence 5
No 10
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-37 Score=352.79 Aligned_cols=290 Identities=14% Similarity=0.209 Sum_probs=244.2
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH----ccCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA----RQNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~----~y~~~~G~~~lr~ala~~l~ 662 (903)
+++++.......++.+..... ..+++|+|+.|+|++++++.+.+++..... .|....|.+++|++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 80 (384)
T PRK06348 6 LAKKYQQMEVNIMAEIATLAK-----KFPDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYS 80 (384)
T ss_pred HHHHHhcCCccHHHHHHHHHH-----hcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHH
Confidence 556666666666766665432 345789999999999888887776555432 36777899999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|...+++ +|++|+|+++++..++.++++|||+|++++|+|+.|...++..|++++.+++.++++|.+|++.+++.+
T Consensus 81 ~~~~~~~~~~-~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 159 (384)
T PRK06348 81 KNYDLSFKRN-EIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALI 159 (384)
T ss_pred HHhCCCCChh-hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhh
Confidence 8899888887 999999999999999999999999999999999999999999999999999876678999999999988
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ +++++++|+ ||||.++|.+++++|+++|++++++||+||+|.++.|++... + +..+++.+ +++|
T Consensus 160 ~~~~-~~v~l~~p~-NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~---~----~~~~~~~~---~~vi 227 (384)
T PRK06348 160 TSKT-KAIILNSPN-NPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV---P----MATLAGMP---ERTI 227 (384)
T ss_pred CcCc-cEEEEeCCC-CCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc---c----hhhcCCCc---CcEE
Confidence 7665 589999997 999999999999999999999999999999999999875432 1 22233222 5899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||+||+||+|+||++++++ +++.+.++.. ..+++.+.|.++..+|. +. +.+++++++.|++|++.
T Consensus 228 ~~~SfSK~~~l~GlRiG~~v~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~r~~~ 299 (384)
T PRK06348 228 TFGSFSKDFAMTGWRIGYVIAPDY-IIETAKIINEGICFSAPTISQRAAIYALK--HR-----DTIVPLIKEEFQKRLEY 299 (384)
T ss_pred EEecchhccCCccccceeeecCHH-HHHHHHHHHHhccCCCCHHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987 9998887764 56789999999999994 22 46788899999999887
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 300 ~~ 301 (384)
T PRK06348 300 AY 301 (384)
T ss_pred HH
Confidence 64
No 11
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-37 Score=364.30 Aligned_cols=310 Identities=15% Similarity=0.162 Sum_probs=240.2
Q ss_pred HhhhhccCCCCHHHHHHH-Hhhhhc----c----CCCCCeEEccCCCCC----------------CCC------------
Q 043334 587 KSTEMIGFSRSAISVLNS-AELSIT----E----TPNSGLIHMDVDQSF----------------LPI------------ 629 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~-a~~a~~----~----~~~~~~IdLs~g~p~----------------~~~------------ 629 (903)
+|.++.++.++....+.. +.. +. . .++.++|+|++|+|+ +.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~ 88 (481)
T PTZ00377 10 INPRVVAAEYAVRGLVPARAAE-IKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL 88 (481)
T ss_pred cCHHHhhhhhhcCChHHHHHHH-HHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence 566777776665554432 111 10 1 145799999999996 665
Q ss_pred -cHHHHHHHHHHHHc-------cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc-cCCCeEE
Q 043334 630 -PSLVKAAIFESFAR-------QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI-LEGGTLC 700 (903)
Q Consensus 630 -p~~v~~al~~al~~-------y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~-~pGD~Vl 700 (903)
|..+++++.+++.. |.+..|.+++|+++++++++.+|++++++ +|++|+|+++++..++.+++ +|||.|+
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I~it~Ga~~al~~~~~~l~~~~gD~Vl 167 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPS-DIFLTDGASSGIKLLLQLLIGDPSDGVM 167 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChh-hEEEcCCHHHHHHHHHHHhccCCCCEEE
Confidence 44677776654432 56677999999999999999899998887 99999999999999999998 7999999
Q ss_pred EcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc------CCCcEEEEECCCCCCcccCCCHHHHHHHHH
Q 043334 701 FPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET------VKKPWVYISGPTINPTGLLYSNKEIENILT 774 (903)
Q Consensus 701 v~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~------~~~~~vil~~P~~NPTG~v~s~eel~eI~~ 774 (903)
+++|+|+.|...++..|++++.++++++++|.+|++++++.+++ ++ ++++++||+ ||||.++|.+++++|++
T Consensus 168 v~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~-k~l~l~~P~-NPTG~~~s~e~~~~i~~ 245 (481)
T PTZ00377 168 IPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITP-RALVVINPG-NPTGQVLTRDVMEEIIK 245 (481)
T ss_pred ECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCe-eEEEEECCC-CCCCcCCCHHHHHHHHH
Confidence 99999999999999999999999998778899999999999874 34 589999997 99999999999999999
Q ss_pred HHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchh-cccccceeeEEEe---CcHHHHH
Q 043334 775 VCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLK-MLTGALKFGFLVL---NHPQLVD 850 (903)
Q Consensus 775 ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~-~g~~GlRiG~lv~---~~~~li~ 850 (903)
+|+++|++||+||+|.++.|++.. ++.++.+....+........++|+++||||+ +++||||+||+++ +++ +++
T Consensus 246 ~a~~~~~~iI~De~Y~~l~~~~~~-~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~-li~ 323 (481)
T PTZ00377 246 FCYEKGIVLMADEVYQENIYDGEK-PFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPE-VRE 323 (481)
T ss_pred HHHHCCCEEEEehhhHhhccCCCC-CcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHH-HHH
Confidence 999999999999999999996432 1122222222222110001279999999998 6999999999997 555 999
Q ss_pred HHHhCCC-CCCCcHHHHHHHHHHHhcc---cccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 851 AFSSFPG-LSKPHSTVRYAIKKLLGLR---ERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~~-~~~~s~~~Q~aa~~~L~~~---~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.+.+. ..+++.+.|.++..+|... ++..+.+..++.++++.|++||+.++
T Consensus 324 ~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~ 379 (481)
T PTZ00377 324 QIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLT 379 (481)
T ss_pred HHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988765 5578999999999999411 11112234455566667899998875
No 12
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.9e-37 Score=352.00 Aligned_cols=295 Identities=17% Similarity=0.209 Sum_probs=243.6
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l~ 662 (903)
++++.....+.+..+.+.... .+..++++++|+.|+|++++++.+.+++.+++. .|.+..|.+++|++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 81 (383)
T TIGR03540 3 ADRIENLPPYLFAEIDKKKAE-KKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYK 81 (383)
T ss_pred chhhccCChhHHHHHHHHHHH-HHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 344555555555444432110 124678999999999999989989998887654 36667789999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|.+.+++++|++|+|+++++..++.+++++||.|++++|+|+.|...++..|++++.+|++.+++|.+|++++++.+
T Consensus 82 ~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~ 161 (383)
T TIGR03540 82 RRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDI 161 (383)
T ss_pred HhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhc
Confidence 98898877664799999999999999999999999999999999999999999999999999987678889999999888
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
.+++ +++++++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.|++... .+ +..++.. .+++|
T Consensus 162 ~~~~-~~v~i~~P~-NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~--~~----~~~~~~~---~~~~i 230 (383)
T TIGR03540 162 AKKA-KLMFINYPN-NPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKA--PS----FLEVDGA---KDVGI 230 (383)
T ss_pred cccc-eEEEEeCCC-CCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCC--cC----cccCCCc---ccCEE
Confidence 7665 599999997 999999999999999999999999999999999998866432 11 1222221 14789
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.||+||+|+||++++++ +++++..+.. ..+++.+.|.++..+|. ++ ++|++++++.|++|++.
T Consensus 231 ~~~SfSK~~g~~GlRiG~~i~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~ 302 (383)
T TIGR03540 231 EFHSLSKTYNMTGWRIGMAVGNAD-LIAGLGKVKTNVDSGVFQAIQYAAIAALN--GP-----QDVVKEIRKIYQRRRDL 302 (383)
T ss_pred EEEecccccCCccceeeEEeCCHH-HHHHHHHHHHhcccCCChHHHHHHHHHHh--CC-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 9998887654 55778899999999994 33 47888899999999988
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 303 ~~ 304 (383)
T TIGR03540 303 LL 304 (383)
T ss_pred HH
Confidence 75
No 13
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-37 Score=350.49 Aligned_cols=294 Identities=17% Similarity=0.191 Sum_probs=242.5
Q ss_pred hhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHh
Q 043334 589 TEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKS 663 (903)
Q Consensus 589 ~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~ 663 (903)
+++....++.+..+..... -....++++++|+.|+|++++++.+.+++.+++.. |....|.+++|+++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 84 (385)
T PRK09276 6 DRIKNLPPYLFAEIDKKKA-EKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKR 84 (385)
T ss_pred hHhhhCCccHHHHHHHHHH-HHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 3444455554554443211 01246778999999999999999999998887643 55667899999999999999
Q ss_pred hcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh
Q 043334 664 NFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 664 ~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
.+|.+.+++++|++|+|+++++..++.++++|||+|++++|+|+.|...++..|++++.++++.+++|.+|++.+++.+.
T Consensus 85 ~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~ 164 (385)
T PRK09276 85 RFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA 164 (385)
T ss_pred HhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc
Confidence 88988777646999999999999999999999999999999999999999999999999999866689999999998887
Q ss_pred cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 744 TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
+++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..++.. .+++|+
T Consensus 165 ~~~-~~v~l~~p~-NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~--~~----~~~~~~~---~~~~i~ 233 (385)
T PRK09276 165 KKA-KLMFINYPN-NPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKP--PS----FLEVPGA---KDVGIE 233 (385)
T ss_pred ccc-eEEEEeCCC-CCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCC--CC----hhccCCC---cCCEEE
Confidence 666 599999997 999999999999999999999999999999999988875432 11 2223322 147999
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++||||.||+||+|+||++++++ +++.+.++.. ..+++.+.|.++..+|. +. +.|++++++.|++|++.+
T Consensus 234 ~~S~SK~~g~~GlRiG~~i~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~l 305 (385)
T PRK09276 234 FHSLSKTYNMTGWRIGFAVGNAD-LIAGLGKVKSNVDSGVFQAIQEAGIAALN--GP-----QEVVEELRKIYQERRDIL 305 (385)
T ss_pred EecchhhcCCcchhheeeeCCHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHc--Cc-----HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887 9999987664 55677889999999994 22 478889999999999887
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 306 ~ 306 (385)
T PRK09276 306 V 306 (385)
T ss_pred H
Confidence 5
No 14
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-37 Score=350.70 Aligned_cols=295 Identities=16% Similarity=0.156 Sum_probs=242.1
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l~ 662 (903)
++++.++..+.+..+.+... ..+..|+++++|+.|+|+.++|..+.+++.+.+. .|.+..|.+++|++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 87 (394)
T PRK05942 9 ADRLQALPPYVFARLDELKA-RAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYH 87 (394)
T ss_pred hhhhccCCCcHHHHHHHHHH-HHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHH
Confidence 34455555555544432111 0134677899999999988777777777666553 26667899999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+++|++.+++++|++|+|+++++..++.++++|||+|++++|+|+.+...+...|++++.++++.+++|.+|++++++.+
T Consensus 88 ~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 167 (394)
T PRK05942 88 RRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEV 167 (394)
T ss_pred HHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhc
Confidence 98898888774699999999999999999999999999999999999999999999999999987678999999999988
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
.+++ +++++++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.|++... . .+..+++.+ +++|
T Consensus 168 ~~~~-k~i~l~~P~-NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~--~----~~~~~~~~~---~~~i 236 (394)
T PRK05942 168 AQQA-KILYFNYPS-NPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQP--T----SLLEIPGAK---DIGV 236 (394)
T ss_pred cccc-eEEEEcCCC-CCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCC--C----ChhhCCCcc---ccEE
Confidence 7666 599999997 999999999999999999999999999999999998876532 1 122232222 4789
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.||+||+|+||++++++ +++.+..... ..++++++|.++..+|. .. ++++++.++.|++|+++
T Consensus 237 ~~~SfSK~~~~~GlRiG~i~~~~~-l~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~ 308 (394)
T PRK05942 237 EFHTLSKTYNMAGWRVGFVVGNRH-IIQGLRTLKTNLDYGIFSALQKAAETALQ--LP-----DSYLQQVQERYRTRRDF 308 (394)
T ss_pred EEecchhccCChhhheeeeecCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 9999988765 56788899999999994 22 46888899999999987
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 309 ~~ 310 (394)
T PRK05942 309 LI 310 (394)
T ss_pred HH
Confidence 75
No 15
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=6.7e-37 Score=349.80 Aligned_cols=293 Identities=17% Similarity=0.200 Sum_probs=240.5
Q ss_pred hhhccCCCCHHHHHHH-HhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHH
Q 043334 589 TEMIGFSRSAISVLNS-AELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 589 ~~~~~l~~s~i~~l~~-a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~ 662 (903)
+++.+...+.+..+.. +.. ....++++|+|+.|+|++++++.+.+++.+++.. |.+..|.+++|+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~ 84 (389)
T PRK08068 7 ELLKQLPKQFFASLVAKVNK--KVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYK 84 (389)
T ss_pred hHhhhcCccHHHHHHHHHHH--HHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 3444555555555443 111 0135567999999999988888888888887653 6667899999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|.+.+++.+|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.+|++++++|.+|++++++.+
T Consensus 85 ~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~ 164 (389)
T PRK08068 85 REYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEV 164 (389)
T ss_pred HHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhc
Confidence 88898887765799999999999999999999999999999999999999999999999999987668999999999888
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
.+++ +++++++|| ||||.++|.+++++|+++|++++++||+||+|.++.|++... . ++.... +. .+++|
T Consensus 165 ~~~~-~~v~l~~P~-NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~--~---s~~~~~-~~---~~~~i 233 (389)
T PRK08068 165 AEKA-KLMYLNYPN-NPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKP--V---SFLQTP-GA---KDVGI 233 (389)
T ss_pred cccc-eEEEEECCC-CCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCC--c---ChhhCC-Cc---cCCEE
Confidence 7655 599999998 999999999999999999999999999999999988876321 1 122222 11 14899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||+||+||+|+||++++++ +++.+.+... ..+.+.+.|.++..+|. ++ .++++++++.|++||+.
T Consensus 234 ~~~S~SK~~g~~GlRiG~~~~~~~-l~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~r~~ 305 (389)
T PRK08068 234 ELYTLSKTFNMAGWRVAFAVGNES-VIEAINLLQDHLFVSLFGAIQDAAIEALL--SD-----QSCVAELVARYESRRNA 305 (389)
T ss_pred EEecchhccCCccceeEeEecCHH-HHHHHHHHHhhccCCCChHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 9999987765 34555678999888883 22 27888999999999988
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
++
T Consensus 306 ~~ 307 (389)
T PRK08068 306 FI 307 (389)
T ss_pred HH
Confidence 75
No 16
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-37 Score=351.10 Aligned_cols=297 Identities=16% Similarity=0.177 Sum_probs=240.9
Q ss_pred HHhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHH
Q 043334 586 AKSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQY 660 (903)
Q Consensus 586 ~~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~ 660 (903)
+.++++.+++.+.+..+.....+ .+..+.+.++|+.|+|+.++|+.+.+++.+.+. .|....|.+++|++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~ 83 (403)
T PRK08636 5 IEFNKIKRLPKYVFAEVNELKMA-ARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNW 83 (403)
T ss_pred HHHHHHHhCCccHHHHHHHHHHH-HHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHH
Confidence 34566777777666655542211 123567899999999998877777777766543 366678999999999999
Q ss_pred HHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHH--
Q 043334 661 IKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTL-- 738 (903)
Q Consensus 661 l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L-- 738 (903)
+++.+|++.+++++|++|+|+++++..++.++++|||.|++++|+|+.+...++..|+++++++++.+++|.+|++.+
T Consensus 84 l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 163 (403)
T PRK08636 84 YKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFE 163 (403)
T ss_pred HHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhh
Confidence 999899888876479999999999999999999999999999999999999999999999999986556688998754
Q ss_pred --HHHhhc---CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc
Q 043334 739 --VTILET---VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS 813 (903)
Q Consensus 739 --~~~l~~---~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~ 813 (903)
+++++. ++ +++++++|+ ||||.++|.+++++|+++|++|+++||+||+|+++.|++... . .+..++.
T Consensus 164 ~l~~~~~~~~~~~-~~i~~~~P~-NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~--~----~~~~~~~ 235 (403)
T PRK08636 164 NLEKALRESSPKP-KYVVVNFPH-NPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKT--P----SILEVEG 235 (403)
T ss_pred HHHHHHhhccCCc-eEEEEeCCC-CCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCC--C----ChhcCCC
Confidence 555542 33 589999997 999999999999999999999999999999999999876432 1 1222333
Q ss_pred CCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHH
Q 043334 814 STNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHI 891 (903)
Q Consensus 814 ~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r 891 (903)
.+ +++|+++||||+||+||+|+||++++++ +++++.++.. ..+++++.|.++..++. +. ++++++++
T Consensus 236 ~~---~~~i~~~S~SK~~~~~GlRiG~iv~~~~-li~~~~~~~~~~~~~~~~~~q~~~~~~~~--~~-----~~~~~~~~ 304 (403)
T PRK08636 236 AK---DVAVESYTLSKSYNMAGWRVGFVVGNKK-LVGALKKIKSWLDYGMFTPIQVAATIALD--GD-----QSCVEEIR 304 (403)
T ss_pred cc---ccEEEEEecccccCCccceeeeeeCCHH-HHHHHHHHHHHhcccCChHHHHHHHHHHh--Cc-----HHHHHHHH
Confidence 22 4789999999999999999999999887 9999887764 46778889998887763 22 46889999
Q ss_pred HHHHHHHHHHh
Q 043334 892 RNLESRSKRLK 902 (903)
Q Consensus 892 ~~y~~Rr~~l~ 902 (903)
+.|++|++.+.
T Consensus 305 ~~~~~~~~~l~ 315 (403)
T PRK08636 305 ETYRKRRDVLI 315 (403)
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 17
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=9.9e-37 Score=348.18 Aligned_cols=292 Identities=13% Similarity=0.172 Sum_probs=248.0
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
++.++.++.++.+..+...... ....+++.++|+.|+|++++|+.+.+++.+.+.. |.+..|.+++|+++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 83 (387)
T PRK08960 5 YSRRSRDIEPFHVMALLARANE-LEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYA 83 (387)
T ss_pred hhhHHHhCCchHHHHHHHHHHH-HHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHH
Confidence 3455666667777666542110 1246778999999999999999999999887753 6667899999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|...+++ +|++|+|+++++..++.++++|||+|++++|+|+.+...++..|++++.++++.+++|.+|++.+++.+
T Consensus 84 ~~~g~~~~~~-~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 162 (387)
T PRK08960 84 QRYGVDVDPE-RILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHW 162 (387)
T ss_pred HHhCCCCChh-hEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHh
Confidence 9889888877 999999999999999999999999999999999999999999999999999987668999999999988
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ +++++++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.|++... +... + . +++|
T Consensus 163 ~~~~-~~i~i~~p~-NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~------~~~~-~---~---~~vi 227 (387)
T PRK08960 163 NADT-VGALVASPA-NPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA------SVLE-V---D---DDAF 227 (387)
T ss_pred Cccc-eEEEEECCC-CCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC------Chhh-c---c---CCEE
Confidence 8766 489999998 999999999999999999999999999999999988865432 1111 1 1 4799
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.||+||+|+||++++++ +++++.++.. ..+++.+.|.++..+|. +. .++++.++++.|++|++.
T Consensus 228 ~~~S~SK~~g~~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~s~~~q~a~~~~l~--~~----~~~~l~~~~~~~~~~~~~ 300 (387)
T PRK08960 228 VLNSFSKYFGMTGWRLGWLVAPPA-AVPELEKLAQNLYISASTPAQHAALACFE--PE----TLAILEARRAEFARRRDF 300 (387)
T ss_pred EEeecccccCCcccEEEEEEcCHH-HHHHHHHHHhhhccCCCHHHHHHHHHHhh--cC----cHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987 9999988765 56789999999999994 22 247889999999999988
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
++
T Consensus 301 l~ 302 (387)
T PRK08960 301 LL 302 (387)
T ss_pred HH
Confidence 75
No 18
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=7.1e-37 Score=361.64 Aligned_cols=296 Identities=13% Similarity=0.201 Sum_probs=241.1
Q ss_pred HhhhhccCCCCHHHHHHH-HhhhhccCCCCCeEEccCCCC---CCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNS-AELSITETPNSGLIHMDVDQS---FLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQ 659 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~-a~~a~~~~~~~~~IdLs~g~p---~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~ 659 (903)
+|+++.++..+.+..+.. +.. ++..|.++|+|++|+| ++++|+.+++++.+++. .|....|.+++|+++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~ 196 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANR--MEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQ 196 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHH--HHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHH
Confidence 788999999988876653 222 2457889999999998 57789999988887654 37778899999999999
Q ss_pred HHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHH
Q 043334 660 YIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLV 739 (903)
Q Consensus 660 ~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~ 739 (903)
+++++++...+++ +|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|++++.++++++++|.+|++.++
T Consensus 197 ~~~~~~~~~~~~~-~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~ 275 (517)
T PRK13355 197 YAQLKGLPNVDVD-DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIR 275 (517)
T ss_pred HHHhcCCCCCChh-HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHH
Confidence 9988766567776 999999999999999999999999999999999999999999999999999987778999999999
Q ss_pred HHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCC
Q 043334 740 TILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSF 819 (903)
Q Consensus 740 ~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~ 819 (903)
+++++++ ++++++||| ||||.+++.+++++|+++|++||++||+||+|.++.|++..+ .+ +..+.. +.
T Consensus 276 ~~~~~~~-k~i~i~nP~-NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~--~s----~~~~~~----~~ 343 (517)
T PRK13355 276 SKITSRT-KAIVIINPN-NPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEH--TS----IASLAP----DL 343 (517)
T ss_pred HhcCcCc-eEEEEECCC-CCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCc--cc----HHHhCC----CC
Confidence 9998777 599999998 999999999999999999999999999999999999986542 12 222221 23
Q ss_pred ceEEEccCchhcccccceeeEEEeC--cH---HHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHH
Q 043334 820 NVSLLGGLSLKMLTGALKFGFLVLN--HP---QLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRN 893 (903)
Q Consensus 820 ~vI~l~S~SK~~g~~GlRiG~lv~~--~~---~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~ 893 (903)
.+++++||||+|++||||+||++++ .+ .+++.+..... ..+++.+.|.++..+|. .. ..+++++...++.
T Consensus 344 ~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~--~~--~~~~~~~~~~~~~ 419 (517)
T PRK13355 344 FCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALG--GH--QSVKDYLVPGGRV 419 (517)
T ss_pred eEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhc--CC--ccHHHHHHHHHHH
Confidence 6888999999999999999999965 32 24555544433 46788999999999994 21 2245677666555
Q ss_pred HHHHHHHHh
Q 043334 894 LESRSKRLK 902 (903)
Q Consensus 894 y~~Rr~~l~ 902 (903)
++ +|++++
T Consensus 420 ~~-~r~~l~ 427 (517)
T PRK13355 420 YE-QRELVY 427 (517)
T ss_pred HH-HHHHHH
Confidence 54 456654
No 19
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1e-36 Score=348.82 Aligned_cols=297 Identities=15% Similarity=0.195 Sum_probs=239.8
Q ss_pred ccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhhcCCC
Q 043334 592 IGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSNFGFP 668 (903)
Q Consensus 592 ~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~~G~~ 668 (903)
..++.+.+..+...........+.+.++|+.|+|++++|+.+.+++.+.+. .|.+..|.+++|+++++++++.+|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~ 84 (393)
T TIGR03538 5 SRLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLP 84 (393)
T ss_pred hhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCc
Confidence 344555565555321100013578999999999999999999999887654 37778899999999999999988876
Q ss_pred --CCCCCcEEecCchHHHHHHHHHHhccCCCe--EEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc
Q 043334 669 --IDINAEFIYADCSQSLFNKLVLCCILEGGT--LCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET 744 (903)
Q Consensus 669 --~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~--Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~ 744 (903)
.+++++|++|+|+++++..++.++++|||. |++++|+|+.|...++..|++++.++++++++|.+|++.+++++.+
T Consensus 85 ~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~ 164 (393)
T TIGR03538 85 TGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR 164 (393)
T ss_pred ccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh
Confidence 566447999999999999999999999986 9999999999999999999999999998777899999999988876
Q ss_pred CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEE
Q 043334 745 VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLL 824 (903)
Q Consensus 745 ~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l 824 (903)
++ +++++++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.|++... ..+........... ..+++|++
T Consensus 165 ~~-k~i~l~~p~-NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~vi~i 239 (393)
T TIGR03538 165 RC-QLLFVCSPG-NPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNP-PAGLLQAAAQLGRD--DFRRCLVF 239 (393)
T ss_pred cc-eEEEEeCCC-CCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCC-CcCHHHhccccccc--ccccEEEE
Confidence 55 589999997 999999999999999999999999999999999988875211 01111111111100 02589999
Q ss_pred ccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 825 GGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 825 ~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+||||.|++||+|+||++++++ +++.+.++.. ..+++.+.|.++...+. + ++++++.++.|++|++.+.
T Consensus 240 ~S~SK~~~~~GlRvG~~i~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~------~~~~~~~~~~~~~~~~~~~ 310 (393)
T TIGR03538 240 HSLSKRSNLPGLRSGFVAGDAE-ILKAFLRYRTYHGCAMPIPTQLASIAAWN--D------EQHVRENRALYREKFAAVL 310 (393)
T ss_pred ecchhhcCCcccceEEEecCHH-HHHHHHHHHHhhccCcCHHHHHHHHHHhc--C------hHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 9998887765 55788899999888883 2 2678888999999998775
No 20
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.1e-36 Score=349.88 Aligned_cols=295 Identities=15% Similarity=0.160 Sum_probs=240.5
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l~ 662 (903)
++++..+..+.+..+..+..+ .+..++++|+|+.|+|++++|+.+.+++.+.+. .|.+..|.+++|++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 82 (405)
T PRK09148 4 FHRIRRLPPYVFEQVNRLKAA-ARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYA 82 (405)
T ss_pred hhhhhcCCccHHHHHHHHHHH-HHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHH
Confidence 445556666666665533211 123577899999999999888888888877653 36667899999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+++|.+.+++++|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++++.+++|..++++..+..
T Consensus 83 ~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~ 162 (405)
T PRK09148 83 RRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHS 162 (405)
T ss_pred HHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhc
Confidence 88898877765899999999999999999999999999999999999999999999999999986666655655544433
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
.+++ +++++++|| ||||.++|.+++++|+++|++++++||+||+|.++.|++... .+ +..++... +++|
T Consensus 163 ~~~~-~~v~l~~P~-NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~--~s----~~~~~~~~---~~~i 231 (405)
T PRK09148 163 IPKP-IALIVNYPS-NPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPP--PS----VLQVPGAK---DVTV 231 (405)
T ss_pred cccc-eEEEEeCCC-CCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCC--CC----hhhCCCcc---CcEE
Confidence 3445 589999998 999999999999999999999999999999999998876432 11 22233222 4789
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.||+||+|+||+++++. +++++.+++. ..+++++.|.++..+|+ +. +++++++++.|++|++.
T Consensus 232 ~~~SfSK~~~~pGlR~G~~v~~~~-~i~~l~~~~~~~~~~~~~~~q~~~~~~L~--~~-----~~~~~~~~~~~~~~r~~ 303 (405)
T PRK09148 232 EFTSMSKTFSMAGWRMGFAVGNER-LIAALTRVKSYLDYGAFTPIQVAATAALN--GP-----QDCIAEMRELYKKRRDV 303 (405)
T ss_pred EEeccccccCCcchheeeeeCCHH-HHHHHHHHHHHhccCCChHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 9999988765 56788999999999994 22 36888999999999998
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
++
T Consensus 304 l~ 305 (405)
T PRK09148 304 LV 305 (405)
T ss_pred HH
Confidence 75
No 21
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.1e-36 Score=354.55 Aligned_cols=272 Identities=14% Similarity=0.216 Sum_probs=230.4
Q ss_pred CCCCCeEEccCCCCC----CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH
Q 043334 612 TPNSGLIHMDVDQSF----LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ 682 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~----~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~ 682 (903)
..++++|+|++|+|+ +.+|+.+.+++.+++.. |.+..|.+++|+++++++.+.+|...+|+ +|++|+|++
T Consensus 63 ~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~-~I~it~G~~ 141 (462)
T PLN02187 63 DVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPE-DIFLTAGCN 141 (462)
T ss_pred CCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcc-cEEEeCCHH
Confidence 567889999999998 55778888888887653 55677899999999999998889888887 999999999
Q ss_pred HHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCccc
Q 043334 683 SLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGL 762 (903)
Q Consensus 683 ~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~ 762 (903)
+++..++.++++|||.|++++|+|+.|...++..|++++.+++.++++|.+|++.+++++++++ ++++++||| ||||.
T Consensus 142 ~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~-~~v~i~nP~-NPTG~ 219 (462)
T PLN02187 142 QGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENT-VAMVVINPN-NPCGN 219 (462)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCc-EEEEEeCCC-CCCCC
Confidence 9999999999999999999999999999999999999999999766789999999999887766 599999998 99999
Q ss_pred CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 763 LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..+... .++|+++||||+|++||||+||++
T Consensus 220 v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~--~s----~~~~~~~----~~vi~l~SfSK~f~~pGlRiG~~v 289 (462)
T PLN02187 220 VYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPF--VS----MGKFASI----VPVLTLAGISKGWVVPGWKIGWIA 289 (462)
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc--ee----HHHhccC----CcEEEEecchhhcCCccceeEEEE
Confidence 9999999999999999999999999999999976532 11 2223322 379999999999999999999999
Q ss_pred eCcH-H---HHHHHHhCCC----CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 843 LNHP-Q---LVDAFSSFPG----LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 843 ~~~~-~---li~~l~~~~~----~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++ . +++.+..++. ..+++.+.|.++..+|+ +. .++|++++++.|++|++++.
T Consensus 290 ~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~--~~----~~~~l~~~~~~l~~~r~~l~ 351 (462)
T PLN02187 290 LNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILE--KA----DKNFFAKKNKILKHNVDLVC 351 (462)
T ss_pred ecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHh--cC----cHHHHHHHHHHHHHHHHHHH
Confidence 8542 2 2345555443 23568999999999994 22 14789999999999998875
No 22
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-36 Score=348.94 Aligned_cols=272 Identities=16% Similarity=0.221 Sum_probs=225.3
Q ss_pred cCCCCCeEEccCCCCC----CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCch
Q 043334 611 ETPNSGLIHMDVDQSF----LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCS 681 (903)
Q Consensus 611 ~~~~~~~IdLs~g~p~----~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs 681 (903)
...++++|+|++|+|+ +++|+.+.+++.+++.. |.+..|.+++|+++++++.+.+|.+.+++ +|++|+|+
T Consensus 28 ~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~I~it~G~ 106 (409)
T PLN00143 28 EDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPD-DVYLTLGC 106 (409)
T ss_pred cCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHh-hEEEecCh
Confidence 3578899999999998 89999999998887653 66778999999999999999889888877 99999999
Q ss_pred HHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcc
Q 043334 682 QSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTG 761 (903)
Q Consensus 682 ~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG 761 (903)
++++..++.++++|||.|++++|+|+.|...++..|++++.++++++++|.+|++++++++++++ ++++++||| ||||
T Consensus 107 ~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~~~~~nP~-NPTG 184 (409)
T PLN00143 107 KHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENT-IAMVIINPG-NPCG 184 (409)
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCC-EEEEEECCC-CCCC
Confidence 99999999999999999999999999999999999999999999766789999999999887666 589999997 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL 841 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l 841 (903)
.++|.+++++|+++|++++++||+||+|.++.|++... .+ +..+... +++|+++||||.|++||||+||+
T Consensus 185 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~--~~----~~~~~~~----~~vi~~~SfSK~f~~pGlRvG~~ 254 (409)
T PLN00143 185 SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPF--VP----MGLFASI----VPVITLGSISKRWMIPGWGLGWL 254 (409)
T ss_pred CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCC--cc----hhhhccc----CcEEEEccchhhcCCCccceEEE
Confidence 99999999999999999999999999999999976432 11 2222222 48999999999999999999999
Q ss_pred EeC-cHHH------HHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 842 VLN-HPQL------VDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 842 v~~-~~~l------i~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
+++ ++.+ ++.+.+... ...++.+.|.++..+|. ++. ..++++.++.++++++.+
T Consensus 255 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~--~~~----~~~~~~~~~~~~~~~~~~ 316 (409)
T PLN00143 255 VTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILE--KTT----EDFFSKTINILRAALAFC 316 (409)
T ss_pred EeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHh--cCh----HHHHHHHHHHHHHHHHHH
Confidence 994 3223 344444432 33457899999999994 211 245556666666665544
No 23
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.3e-36 Score=351.88 Aligned_cols=273 Identities=14% Similarity=0.162 Sum_probs=226.1
Q ss_pred CCCCCeEEccCCCC---CCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 612 TPNSGLIHMDVDQS---FLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 612 ~~~~~~IdLs~g~p---~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
..+.+++++++|+| ++++|+.+.+++.+.+. .|.+..|.+++|+++++++++++|++.+|+ +|++|+|+++
T Consensus 29 ~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~-~I~it~G~~~ 107 (433)
T PRK06855 29 KLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPD-DIIFFNGLGD 107 (433)
T ss_pred hccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHh-HEEEcCcHHH
Confidence 45678999999999 67899999988888764 266678999999999999999889988887 9999999999
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHH-HHcCCEEEEecCCCCCCcccCHHHHHHHhhcC-CCcEEEEECCCCCCcc
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAA-RFLKANIVNIPTESEVGFKMTEKTLVTILETV-KKPWVYISGPTINPTG 761 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~-~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-~~~~vil~~P~~NPTG 761 (903)
++..++. +++|||.|++++|+|+.|.... ...|++++.++++++++|.+|++++++.++.. ..+++++++|+ ||||
T Consensus 108 al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~-NPTG 185 (433)
T PRK06855 108 AIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPD-NPTG 185 (433)
T ss_pred HHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCC-CCCC
Confidence 9999875 7899999999999999987653 45699999999987678999999999998642 23589999997 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL 841 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l 841 (903)
.++|.+++++|+++|+++|++||+||+|.++.|++... .+ +..+.. +.++|+++||||+|++||||+||+
T Consensus 186 ~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~--~s----l~~~~~----~~~~I~~~S~SK~~~~pGlRiG~i 255 (433)
T PRK06855 186 AVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKT--VP----LSEVIG----DVPGIALKGISKELPWPGSRCGWI 255 (433)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC--CC----HHHHcC----cCCeEEEecCccccCCCcceEEEE
Confidence 99999999999999999999999999999999976532 12 222221 136899999999999999999999
Q ss_pred EeCc----H---HHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 842 VLNH----P---QLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 842 v~~~----~---~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++ . .+++.+..... ..+++++.|.++..+|. ++ .++++++++++.|++|+++++
T Consensus 256 i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~--~~---~~~~~~~~~~~~~~~r~~~~~ 319 (433)
T PRK06855 256 EVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMS--HP---EYKNYLKERNKRYEKRSNIAY 319 (433)
T ss_pred EEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhc--CC---cHHHHHHHHHHHHHHHHHHHH
Confidence 9842 2 24444444332 45678999999999994 33 346899999999999999875
No 24
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.9e-36 Score=348.22 Aligned_cols=273 Identities=15% Similarity=0.273 Sum_probs=235.1
Q ss_pred cCCCCCeEEccCCCCC----CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCch
Q 043334 611 ETPNSGLIHMDVDQSF----LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCS 681 (903)
Q Consensus 611 ~~~~~~~IdLs~g~p~----~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs 681 (903)
+..+.++|+|++|+|+ +++|+.+.+++.+++.. |.+..|.+++|+++++++.+.+|...+++ +|++|+|+
T Consensus 27 ~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~ 105 (409)
T PLN02656 27 EENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLD-DVFITSGC 105 (409)
T ss_pred cccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcc-cEEEeCCh
Confidence 3578899999999998 78899999998887653 55677999999999999999889888877 99999999
Q ss_pred HHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcc
Q 043334 682 QSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTG 761 (903)
Q Consensus 682 ~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG 761 (903)
++++..++.+++++||+|++++|+|+.|...++..|++++.++++.+++|.+|++.+++.+++++ +++++++|+ ||||
T Consensus 106 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~-~~v~l~~P~-NPtG 183 (409)
T PLN02656 106 TQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNT-VALVIINPG-NPCG 183 (409)
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCc-eEEEEECCC-CCCC
Confidence 99999999999999999999999999999999999999999999766789999999999887766 589999998 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL 841 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l 841 (903)
.++|.+++++|+++|++++++||+||+|.++.|++... .+ +..++.. .++|+++||||+|++||||+||+
T Consensus 184 ~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~--~~----~~~~~~~----~~vi~~~SfSK~f~~pGlRiG~~ 253 (409)
T PLN02656 184 NVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPF--VP----MGVFGSI----VPVLTLGSLSKRWIVPGWRLGWF 253 (409)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCc--cc----HHHhccc----CcEEEEcccchhccCcceeEEEE
Confidence 99999999999999999999999999999999987532 11 2222222 48999999999999999999999
Q ss_pred EeCc-------HHHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 842 VLNH-------PQLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 842 v~~~-------~~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++ .++++++.+... ..+++.+.|.++..+|. ++. +.++++.++.|++||+.++
T Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~--~~~----~~~~~~~~~~~~~~r~~~~ 316 (409)
T PLN02656 254 VTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILE--QTD----ESFFKKTINILKQSSDICC 316 (409)
T ss_pred EEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHh--cCc----HHHHHHHHHHHHHHHHHHH
Confidence 9952 348888887654 45678999999999994 221 3688899999999998875
No 25
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=2.2e-36 Score=344.94 Aligned_cols=268 Identities=9% Similarity=0.146 Sum_probs=229.6
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHH----ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFA----RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~----~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+++|+|+.|+|++++++.+.+++.+.+. .|.+..|.+++|+++++++++++|++.+++++|++|+|+++++..++
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~ 107 (384)
T PRK12414 28 QHDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAI 107 (384)
T ss_pred hCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHH
Confidence 45799999999999989988888877654 36677899999999999999999988765448999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.++++|||+|++++|+|..|...++..|++++.++++. ++|.+|++.+++.+++++ +++++++|+ ||||.++|.+++
T Consensus 108 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~-~~v~i~~p~-NPTG~~~s~~~~ 184 (384)
T PRK12414 108 SALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRT-RMIIVNTPH-NPSATVFSAADL 184 (384)
T ss_pred HHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCccc-EEEEEcCCC-CCCCcCCCHHHH
Confidence 99999999999999999999999999999999999875 468899999999987665 589999998 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
++|+++|+++|++||+||+|.++.|++.... + +..++.. .+++|+++||||.||+||+|+||++++++ ++
T Consensus 185 ~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~--~----~~~~~~~---~~~~i~~~SfSK~~~~pGlRiG~~v~~~~-l~ 254 (384)
T PRK12414 185 ARLAQLTRNTDIVILSDEVYEHVVFDGARHH--S----MARHREL---AERSVIVSSFGKSYHVTGWRVGYCLAPAE-LM 254 (384)
T ss_pred HHHHHHHHHCCeEEEEhhhhhhccCCCCCcc--C----cccCcCc---cCcEEEEecccccccCccceEEEEecCHH-HH
Confidence 9999999999999999999999999764321 1 2222222 25899999999999999999999999987 99
Q ss_pred HHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+.++.. ..+++.+.|.++..+|. ++ .+..++++.|++||+.++
T Consensus 255 ~~l~~~~~~~~~~~s~~~q~a~~~~l~--~~------~~~~~~~~~~~~~r~~l~ 301 (384)
T PRK12414 255 DEIRKVHQFMVFSADTPMQHAFAEALA--EP------ASYLGLGAFYQRKRDLLA 301 (384)
T ss_pred HHHHHHHhheecCCCcHHHHHHHHHhc--CC------hHHHHHHHHHHHHHHHHH
Confidence 99988764 67789999999999994 33 223457888999998875
No 26
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-36 Score=344.95 Aligned_cols=271 Identities=15% Similarity=0.196 Sum_probs=226.7
Q ss_pred CCCCeEEccCCCCC-CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 613 PNSGLIHMDVDQSF-LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 613 ~~~~~IdLs~g~p~-~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
-+.+.|+|+.|+++ +++|+.+.+++.+++.. |....|.+++|+++++++++++|.+.+++++|++|+|+++++.
T Consensus 37 ~~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 37 LPGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 35678999999988 45777888888877643 5667899999999999999999988777239999999999999
Q ss_pred HHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCC---CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 687 KLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTE---SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 687 ~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~---~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
.++.+++++||+|++++|+|+.+...++..|++++.++++ .+++|.+|++.|++++++++ +++++++|+ ||||.+
T Consensus 117 ~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~-k~v~l~~P~-NPTG~~ 194 (405)
T PRK06207 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGV-RVFLFSNPN-NPAGVV 194 (405)
T ss_pred HHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcC-eEEEECCCC-CCCCcC
Confidence 9999999999999999999999999999999999999986 23468899999999987766 589999998 999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
++.+++++|+++|+++|++||+||+|.++.|++... .+ +..+.... +++|+++||||+|++||+|+||+++
T Consensus 195 ~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~--~~----~~~~~~~~---~~vi~i~SfSK~~~lpGlRiG~ii~ 265 (405)
T PRK06207 195 YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSY--TH----LRALPIDP---ENVITIMGPSKTESLSGYRLGVAFG 265 (405)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC--Cc----hhcCCCCc---CcEEEEecchhhccCcccceEEEEc
Confidence 999999999999999999999999999999977542 11 11122221 5899999999999999999999999
Q ss_pred CcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 844 NHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 844 ~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++ +++++.+... ..+.+.+.|.++..+|+ ++ ..++++.++.++++|+.+.
T Consensus 266 ~~~-l~~~~~~~~~~~~~~~~~~~q~a~~~~l~--~~-----~~~~~~~~~~~~~~r~~l~ 318 (405)
T PRK06207 266 SPA-IIDRMEKLQAIVSLRAAGYSQAVLRTWFS--EP-----DGWMKDRIARHQAIRDDLL 318 (405)
T ss_pred CHH-HHHHHHHHHhHhccCCCHHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHHHH
Confidence 987 9999988765 55678899999999994 32 1355556666777776654
No 27
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=6.5e-36 Score=345.52 Aligned_cols=270 Identities=13% Similarity=0.233 Sum_probs=229.4
Q ss_pred CCCeEEccCCCCC----CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 614 NSGLIHMDVDQSF----LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 614 ~~~~IdLs~g~p~----~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
+.++|+|++|+|. +++|+.+.+++.+++.. |.+..|.+++|+++++++.+.+|.+.+++ +|++|+|++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~v~it~G~~~a 129 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTD-DIYLTAGCAQA 129 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChh-hEEEeCCHHHH
Confidence 7789999999995 77889999999888753 55567999999999999998889888877 99999999999
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCC
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLY 764 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~ 764 (903)
+.+++.++++|||+|++++|+|+.|...+...|++++.+++.++++|.+|++.+++.+++++ ++++++||| ||||.++
T Consensus 130 l~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~i~i~~P~-NPtG~v~ 207 (430)
T PLN00145 130 IEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENT-VAMVIINPN-NPCGSVY 207 (430)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCc-eEEEEeCCC-CCCCCCC
Confidence 99999999999999999999999999999999999999998777789999999999988777 599999998 9999999
Q ss_pred CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 765 SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 765 s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+.+++++|+++|+++|++||+||+|.++.|++... .+ +..++.. .++|+++||||.|++||||+||++++
T Consensus 208 ~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~--~~----~~~~~~~----~~vi~~~S~SK~~~~pG~RlG~iv~~ 277 (430)
T PLN00145 208 SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPF--VP----MGVFGEV----APVLTLGSISKRWVVPGWRLGWIATC 277 (430)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCc--cc----hhhhccc----CcEEEEeccccccCCCCeeEEEEEEe
Confidence 99999999999999999999999999999976432 11 2223322 48999999999999999999999984
Q ss_pred -cHHHH------HHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 845 -HPQLV------DAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 845 -~~~li------~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.++ +.+..... ..+++++.|.++..+|. ++ .++++++.++.|++|++.++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~--~~----~~~~~~~~~~~~~~~~~~~~ 337 (430)
T PLN00145 278 DPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIA--NT----KEEFFTKTLGLLKETADICY 337 (430)
T ss_pred cchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHh--cC----HHHHHHHHHHHHHHHHHHHH
Confidence 22233 34444433 44678999999999994 22 14788899999999998875
No 28
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=5.3e-36 Score=341.02 Aligned_cols=268 Identities=17% Similarity=0.244 Sum_probs=231.5
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
++.|+|+.|+|++++++.+.+++.+.+.. |.+..|.+++|+++++++.+.+|+..+++++|++|+|+++++..++.
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR 99 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 57899999999998888888888776643 65678999999999999999889887776579999999999999999
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++++|||+|++++|+|+.|...++..|++++.++++.+++|.+|++++++++.+++ +++++++|+ ||||.++|.++++
T Consensus 100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~v~~~~p~-NPtG~~~s~~~~~ 177 (378)
T PRK07682 100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKT-KAILLCSPN-NPTGAVLNKSELE 177 (378)
T ss_pred HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCccc-EEEEEECCC-CCcCcCcCHHHHH
Confidence 99999999999999999999999999999999998765678899999999987765 588999997 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
+|+++|++++++||+||+|.++.|++... + +..+.+. .+++++++||||.|++||+|+||++++++ +++
T Consensus 178 ~l~~~~~~~~~~ii~De~y~~~~~~~~~~---~----~~~~~~~---~~~~i~~~S~SK~~~~~GlR~G~~~~~~~-~i~ 246 (378)
T PRK07682 178 EIAVIVEKHDLIVLSDEIYAELTYDEAYT---S----FASIKGM---RERTILISGFSKGFAMTGWRLGFIAAPVY-FSE 246 (378)
T ss_pred HHHHHHHHcCcEEEEehhhhhcccCCCCC---C----hhhcccc---cCCEEEEecCcccccChhhhhhhhhcCHH-HHH
Confidence 99999999999999999999999876432 1 1122222 14899999999999999999999999987 999
Q ss_pred HHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 851 AFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.+... ..+++.+.|.++..+|+ ++ +.+++++++.|++|++.+.
T Consensus 247 ~l~~~~~~~~~~~~~~~q~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~~~ 293 (378)
T PRK07682 247 AMLKIHQYSMMCAPTMAQFAALEALR--AG-----NDDVIRMRDSYRKRRNFFV 293 (378)
T ss_pred HHHHHHHhhccCCCHHHHHHHHHHHh--CC-----hHHHHHHHHHHHHHHHHHH
Confidence 9987654 56788999999999994 33 2568889999999998875
No 29
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-36 Score=342.03 Aligned_cols=295 Identities=17% Similarity=0.223 Sum_probs=245.4
Q ss_pred HhhhhccCCCCHHHHHHH-HhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNS-AELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYI 661 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~-a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l 661 (903)
+++|+.+++.+.+..+.. +... ...++++++|+.|.|++++++.+.+++.+.+.. |....|.+++|+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l 83 (402)
T PRK06107 6 PAARVSRIKPSPSTAAAARAREL--RAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKL 83 (402)
T ss_pred hhHHhhhcCccHHHHHHHHHHHH--HhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH
Confidence 344555555554444332 2211 245678999999999999888899988887753 666789999999999999
Q ss_pred HhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHH
Q 043334 662 KSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTI 741 (903)
Q Consensus 662 ~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~ 741 (903)
++++|.+..++ +|++|+|+++++..++.+++++||.|++++|+|+.|...+...|++++.++++.+++|.+|++.+++.
T Consensus 84 ~~~~g~~~~~~-~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 162 (402)
T PRK06107 84 ERRNGLHYADN-EITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAA 162 (402)
T ss_pred HHhcCCCCChh-hEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhh
Confidence 99889988777 99999999999999999999999999999999999999999999999999987667899999999998
Q ss_pred hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhC-CcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc
Q 043334 742 LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKY-GARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN 820 (903)
Q Consensus 742 l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~-~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~ 820 (903)
+.+++ +++++++|+ ||||.++|.+++++|+++|+++ +++||+||+|+++.|++... . ++....++. .++
T Consensus 163 ~~~~~-~~v~l~~p~-NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~--~---~~~~~~~~~---~~~ 232 (402)
T PRK06107 163 ITPRT-RWLILNAPS-NPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPT--P---HLLAAAPEL---RDR 232 (402)
T ss_pred cCcCc-eEEEEECCC-CCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCC--C---CHHHhCcCc---cCC
Confidence 87655 589999998 9999999999999999999998 99999999999999876432 1 122221222 258
Q ss_pred eEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 821 VSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 821 vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
+|+++||||.|++||+|+||++++++ +++++..... ..+++.++|.++..+|. ++ +.++++.++.|++|+
T Consensus 233 vi~~~S~SK~~~~pGlRiG~~~~~~~-~~~~~~~~~~~~~~~~s~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~ 304 (402)
T PRK06107 233 VLVTNGVSKTYAMTGWRIGYAAGPAD-LIAAINKLQSQSSSCPSSISQAAAAAALN--GD-----QSFVTESVAVYKQRR 304 (402)
T ss_pred EEEEeccchhhcCcccceeeeecCHH-HHHHHHHHHHhcccCCChHHHHHHHHHhc--CC-----hHHHHHHHHHHHHHH
Confidence 99999999999999999999999987 9999988764 67899999999999994 22 368899999999999
Q ss_pred HHHh
Q 043334 899 KRLK 902 (903)
Q Consensus 899 ~~l~ 902 (903)
+.+.
T Consensus 305 ~~~~ 308 (402)
T PRK06107 305 DYAL 308 (402)
T ss_pred HHHH
Confidence 8875
No 30
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=9.9e-36 Score=338.40 Aligned_cols=269 Identities=15% Similarity=0.165 Sum_probs=222.0
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+.++++|+.|+|++++++.+.+++.+... .|.+..|.+++|+++++++++++|++.+++ +|++|+|+++++..++
T Consensus 22 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~-~I~it~G~~~al~~~~ 100 (374)
T PRK05839 22 KEYKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKEN-ELIPTFGTREVLFNFP 100 (374)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc-eEEEecCcHHHHHHHH
Confidence 366999999999999999888888876543 366778999999999999999999888877 9999999999999888
Q ss_pred HHhc--cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHH
Q 043334 690 LCCI--LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNK 767 (903)
Q Consensus 690 ~~l~--~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~e 767 (903)
.+++ .+||.|+++.|+|+.|...++..|+++++++++.+++|.+|....+ + +++ ++++++||| ||||.++|.+
T Consensus 101 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~-k~v~i~nP~-NPTG~~~s~~ 175 (374)
T PRK05839 101 QFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEV-DLVILNSPN-NPTGRTLSLE 175 (374)
T ss_pred HHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccc-cEEEEeCCC-CCcCcccCHH
Confidence 8764 4799999999999999999999999999999987778888875543 2 234 599999998 9999999999
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccC-CCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 768 EIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSS-TNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 768 el~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~-~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
++++|+++|+++|++||+||+|.++.+++... + ........ .+..+++|+++||||.|++||+|+||++++++
T Consensus 176 ~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~---s---~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~ 249 (374)
T PRK05839 176 ELIEWVKLALKHDFILINDECYSEIYENTPPP---S---LLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDAS 249 (374)
T ss_pred HHHHHHHHHHHcCCEEEeccchhhcccCCCCC---C---HhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHH
Confidence 99999999999999999999999876543321 1 11111000 00014899999999999999999999999876
Q ss_pred HHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 847 QLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 847 ~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++++.+... ..+.+.+.|.++..+|. + +++++++++.|++|++++.
T Consensus 250 -~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~------~~~~~~~~~~~~~~~~~~~ 298 (374)
T PRK05839 250 -ILKKYKAYRTYLGCASPLPLQKAAAVAWL--D------DEHAEFFRNIYAKNLKLAR 298 (374)
T ss_pred -HHHHHHHHHhhcCCCCChHHHHHHHHHhc--c------chHHHHHHHHHHHHHHHHH
Confidence 9999887754 46788899999988883 2 2678888999999998875
No 31
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2e-35 Score=343.05 Aligned_cols=267 Identities=18% Similarity=0.221 Sum_probs=230.2
Q ss_pred CCeEEccCCCCCCC--CcHHHHHHHHHHHH--------ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 615 SGLIHMDVDQSFLP--IPSLVKAAIFESFA--------RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 615 ~~~IdLs~g~p~~~--~p~~v~~al~~al~--------~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
+..++|+.|.|+.. +-....+++...++ .|....|.+++|+++++++....|+.++++ +|++|+|++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~-~IiiT~G~q~a 167 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPE-QIVITSGAQQA 167 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcC-eEEEeCCHHHH
Confidence 78999999987654 23334444444432 355668999999999999997799999988 99999999999
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCC-CCCcccC
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPT-INPTGLL 763 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~-~NPTG~v 763 (903)
+.+++..+++|||+|++++|+|.....+++..|+++++||+++ +| +|+++|++.+...++ -+++++|+ |||||.+
T Consensus 168 l~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~-~G--~~~e~le~~~~~~~~-k~~y~~P~~qNPtG~t 243 (459)
T COG1167 168 LDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDE-DG--IDPEALEEALAQWKP-KAVYVTPTFQNPTGVT 243 (459)
T ss_pred HHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC-CC--CCHHHHHHHHhhcCC-cEEEECCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999985 44 999999999987654 56677788 9999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
||.+++++|+++|++||++||+||+|+++.|++.+.+ .+..++. .++||+++||||++. ||+|+||+++
T Consensus 244 ms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~------~l~~ld~----~~rViy~gSFSK~l~-PglRlG~vv~ 312 (459)
T COG1167 244 MSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPP------PLKALDA----PGRVIYLGSFSKTLA-PGLRLGYVVA 312 (459)
T ss_pred cCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCC------ChHhhCC----CCCEEEEeeehhhcc-cccceeeeeC
Confidence 9999999999999999999999999999999977631 2333333 269999999999995 9999999999
Q ss_pred CcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHhC
Q 043334 844 NHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLKE 903 (903)
Q Consensus 844 ~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~e 903 (903)
|+. +++.+...+. +.+++.++|.++...+. +| .+++|+.++|+.|++||+++.+
T Consensus 313 p~~-~~~~~~~~k~~~~~~~s~~~Q~~la~~l~--~G---~~~~hl~~lR~~y~~rr~~l~~ 368 (459)
T COG1167 313 PPE-LIEKLLRLKQAADLGPSSLSQAALAAFLL--SG---HYDRHLRRLRREYARRRDALLE 368 (459)
T ss_pred CHH-HHHHHHHHHHHhcCCCChHHHHHHHHHHH--cC---CHHHHHHHHHHHHHHHHHHHHH
Confidence 998 9999988765 88899999999999994 44 4789999999999999999863
No 32
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.2e-35 Score=339.28 Aligned_cols=290 Identities=12% Similarity=0.185 Sum_probs=244.6
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
+++++..+..+.++.+.... .+.++|+|+.|.|++++++.+.+++.+.+.. |....|.+++|++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~ 81 (386)
T PRK09082 8 PQSKLPNVGTTIFTVMSALA------AEHGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTA 81 (386)
T ss_pred hhhHhhccCccHHHHHHHHH------hhCCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHH
Confidence 45566667777666665422 2357899999999998888888888887643 5566789999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|.+.+++.+|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++. ++|.+|++++++.+
T Consensus 82 ~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~ 160 (386)
T PRK09082 82 RLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAI 160 (386)
T ss_pred HHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhc
Confidence 98998877655799999999999999999999999999999999999999999999999999975 46889999999998
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ +++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..+.+.. +++|
T Consensus 161 ~~~~-~~v~l~~p~-NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~--~s----~~~~~~~~---~~~i 229 (386)
T PRK09082 161 SPRT-RLIILNTPH-NPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGH--AS----VLRHPELR---ERAF 229 (386)
T ss_pred Cccc-eEEEEeCCC-CCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCC--CC----hhhCcCcc---CcEE
Confidence 8766 589999997 999999999999999999999999999999999999976432 11 22222222 5899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.||+||+|+||++++++ +++.+.+... ..+++.+.|.++..+|. +. +++++++++.|++|+++
T Consensus 230 ~~~S~SK~~~~~G~RiG~iv~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~ 301 (386)
T PRK09082 230 VVSSFGKTYHVTGWKVGYCVAPAA-LSAEFRKVHQYNTFTVNTPAQLALADYLR--AE-----PEHYLELPAFYQAKRDR 301 (386)
T ss_pred EEeechhhccchhhhhhhhhCCHH-HHHHHHHHHhhhcCCCChHHHHHHHHHHh--CC-----hHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987 9999988764 67789999999999984 22 36788899999999998
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 302 ~~ 303 (386)
T PRK09082 302 FR 303 (386)
T ss_pred HH
Confidence 75
No 33
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.7e-35 Score=338.15 Aligned_cols=291 Identities=15% Similarity=0.220 Sum_probs=241.9
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHh
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKS 663 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~ 663 (903)
++++.++..+.+..+...... .+..++++++|+.|+|++++++.+.+++.+.+.. |....|.+++|+++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 82 (388)
T PRK07337 4 AARVDAIEPFYVMELAKEAQA-LERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYAR 82 (388)
T ss_pred hhHhHhcCchHHHHHHHHHHH-HHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 444555555556555532110 1246778999999999998888888888877643 55567899999999999999
Q ss_pred hcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh
Q 043334 664 NFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 664 ~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
.+|+..+++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+|++.+++|.+|++++++.++
T Consensus 83 ~~~~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (388)
T PRK07337 83 RFGLDVAPE-RIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG 161 (388)
T ss_pred HhCCCCChH-hEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC
Confidence 899888877 9999999999999999999999999999999999999999999999999999866678999999999998
Q ss_pred cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 744 TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
+++ +++++++|+ ||||.+++.+++++|+++|++++++||+||+|.++.|++... + ... +. +++|+
T Consensus 162 ~~~-~~v~l~~p~-NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~---~---~~~-~~------~~vi~ 226 (388)
T PRK07337 162 ERT-RGVLLASPS-NPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPV---S---ALS-LG------DDVIT 226 (388)
T ss_pred ccc-eEEEEECCC-CCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc---C---hhh-cc------CCEEE
Confidence 776 589999998 999999999999999999999999999999999888865432 1 111 11 47999
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++||||.||+||+|+||++++++ +++.+.+... ..+++.+.|.++..++. ++. .+++.+.++.|++||+.+
T Consensus 227 ~~S~SK~~~~~G~RiG~~~~~~~-l~~~l~~~~~~~~~~~s~~~q~~~~~~l~--~~~----~~~~~~~~~~~~~~r~~~ 299 (388)
T PRK07337 227 INSFSKYFNMTGWRLGWLVVPEA-LVGTFEKLAQNLFICASALAQHAALACFE--PDT----LAIYERRRAEFKRRRDFI 299 (388)
T ss_pred EEechhhcCCchhheeeeecCHH-HHHHHHHHHHHhccCCChHHHHHHHHHhc--cCc----hHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 9999887764 55788999999999983 221 234577899999999887
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
+
T Consensus 300 ~ 300 (388)
T PRK07337 300 V 300 (388)
T ss_pred H
Confidence 5
No 34
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.8e-36 Score=347.49 Aligned_cols=280 Identities=20% Similarity=0.310 Sum_probs=225.5
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHH----------------HHccCCCCCchHHHHHHHHHHHhhcCCC--CCCCCc
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFES----------------FARQNMSESEIDVTPSIQQYIKSNFGFP--IDINAE 674 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~a----------------l~~y~~~~G~~~lr~ala~~l~~~~G~~--~~pe~~ 674 (903)
.+.+.|+|++++|.++. +.+.+.+... +..|....|.++||+++++++.+++|.. .+++ +
T Consensus 36 ~p~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~-~ 113 (468)
T PLN02450 36 NPSGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN-K 113 (468)
T ss_pred CCCeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH-H
Confidence 34579999999998765 4454444432 1236667899999999999999887743 5776 9
Q ss_pred EEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHH-HcCCEEEEecCCCCCCcccCHHHHHHHhhc-----CCCc
Q 043334 675 FIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAAR-FLKANIVNIPTESEVGFKMTEKTLVTILET-----VKKP 748 (903)
Q Consensus 675 I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~-~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-----~~~~ 748 (903)
|++|+|+++++..++.++++|||.|++++|+|+.|...+. ..|+++++++++.+++|.+|++.+++++.+ .+.+
T Consensus 114 Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k 193 (468)
T PLN02450 114 LVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVK 193 (468)
T ss_pred eEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCee
Confidence 9999999999999999999999999999999999988887 589999999998667899999999988764 1335
Q ss_pred EEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhh--hccCCCCCCceEEEcc
Q 043334 749 WVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSK--LYSSTNSSFNVSLLGG 826 (903)
Q Consensus 749 ~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~--l~~~~~~~~~vI~l~S 826 (903)
++++|||+ ||||.++|.+++++|+++|++++++||+||+|+++.|++... .+..+.... +.+. +..+++++++|
T Consensus 194 ~v~l~nP~-NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~--~s~l~~~~~~~~~~~-~~~~~vi~l~S 269 (468)
T PLN02450 194 GVLITNPS-NPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGF--VSVMEVLKDRKLENT-DVSNRVHIVYS 269 (468)
T ss_pred EEEEecCC-CCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCc--ccHHHHhhhcccccC-CCCCcEEEEEe
Confidence 89999998 999999999999999999999999999999999999976432 221111110 0000 00258999999
Q ss_pred CchhcccccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 827 LSLKMLTGALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 827 ~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|||.||+||+|+||++++++.+++++.+.....+++.++|.++..+|. ++ ....+++++.++.|++|++.++
T Consensus 270 ~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~--~~--~~~~~~l~~~~~~l~~rr~~l~ 341 (468)
T PLN02450 270 LSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLS--DK--KFTKNYLEENQKRLKQRQKKLV 341 (468)
T ss_pred ccccCCCCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhC--Cc--hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999775677777765555689999999999994 33 1123578889999999999875
No 35
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=3e-35 Score=336.00 Aligned_cols=289 Identities=19% Similarity=0.245 Sum_probs=242.0
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHh
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKS 663 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~ 663 (903)
+.++..+..+.++.+.... ...++.|+|+.|.|.+++++.+.+++.+.+.. |.+..|.+++|+++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 80 (387)
T PRK07683 6 NPRVKDIQISGIRQFSNMV-----QNYDNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKD 80 (387)
T ss_pred hHHHHhCCccHHHHHHHHH-----HhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4455666666676655432 23467899999999988888888998887753 55678899999999999998
Q ss_pred hcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh
Q 043334 664 NFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 664 ~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
.+|+..+++++|++|+|+++++..++.+++++||.|++++|+|+.|...++..|++++.++++. ++|.+|.+.+++.++
T Consensus 81 ~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~ 159 (387)
T PRK07683 81 KYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEALENAIT 159 (387)
T ss_pred HhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHHHHHhcC
Confidence 8898877766899999999999999999999999999999999999999999999999999874 578899999999887
Q ss_pred cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 744 TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
+++ +++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... + +..+.+.+ +++|+
T Consensus 160 ~~~-~~i~i~~p~-NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~------~-~~~~~~~~---~~vi~ 227 (387)
T PRK07683 160 EKT-RCVVLPYPS-NPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHT------S-IAHFPEMR---EKTIV 227 (387)
T ss_pred cCc-eEEEEeCCC-CCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcC------C-hhhccCCc---CCeEE
Confidence 766 589999998 999999999999999999999999999999999988876442 1 12222222 48999
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++||||.||+||+|+||++++++ +++++.+... ..+++.+.|.++..+|. ++ ..+++++++.|++|++.+
T Consensus 228 ~~s~SK~~~~pGlRiG~i~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~~ 299 (387)
T PRK07683 228 INGLSKSHSMTGWRIGFLFAPSY-LAKHILKVHQYNVTCASSISQYAALEALT--AG-----KDDAKMMRHQYKKRRDYV 299 (387)
T ss_pred EeeccccccCccceeEEEEcCHH-HHHHHHHHHHhccCCCChHHHHHHHHHHh--CC-----hHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 9999887643 45677889999999994 44 256788888899998877
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 300 ~ 300 (387)
T PRK07683 300 Y 300 (387)
T ss_pred H
Confidence 5
No 36
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=3e-35 Score=335.99 Aligned_cols=290 Identities=14% Similarity=0.176 Sum_probs=241.3
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH----ccCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA----RQNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~----~y~~~~G~~~lr~ala~~l~ 662 (903)
+++++.+++.+.+..+..... .++.++|+.|.|+.+.|+.+.+++.+.+. .|.+..|.+++|+++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 77 (387)
T PRK08912 4 GNPVFADLPTTIFEVMSQLAR------EHGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYA 77 (387)
T ss_pred hhHHHhhCCCCHHHHHHHHHh------hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHH
Confidence 455666677777766665322 35789999999998878888888777653 26667899999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|++.+|+.+|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++++. ++|.+|++.+++.+
T Consensus 78 ~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~ 156 (387)
T PRK08912 78 RFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAF 156 (387)
T ss_pred HHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHh
Confidence 98998888766899999999999999999999999999999999999999999999999999864 46789999999998
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
.+++ +++++++|+ ||||.++|.+++++|+++|++++++||+||+|.++.|++... .+ +..+++.. +++|
T Consensus 157 ~~~~-~~v~l~~p~-NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~--~~----~~~~~~~~---~~~i 225 (387)
T PRK08912 157 SPRT-KAVLLNNPL-NPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRH--IP----LMTLPGMR---ERTV 225 (387)
T ss_pred Cccc-eEEEEeCCC-CCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCC--cC----hhhCCCcc---CceE
Confidence 7766 589999997 999999999999999999999999999999999998876432 11 11222221 4899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.||++|+|+||++++++ +++.+.+... ..+.+...|.++..+|. +. .++++++++.|++|++.
T Consensus 226 ~~~S~SK~~g~~GlRiG~~~~~~~-~~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~ 297 (387)
T PRK08912 226 KIGSAGKIFSLTGWKVGFVCAAPP-LLRVLAKAHQFLTFTTPPNLQAAVAYGLG--KP-----DDYFEGMRADLARSRDR 297 (387)
T ss_pred EEeechhhccCcCceeEEEecCHH-HHHHHHHHHhhccccCChHHHHHHHHHHh--CC-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987 9998887654 45667778999988884 22 36778889999999988
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
++
T Consensus 298 l~ 299 (387)
T PRK08912 298 LA 299 (387)
T ss_pred HH
Confidence 75
No 37
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=4.9e-35 Score=336.95 Aligned_cols=272 Identities=16% Similarity=0.291 Sum_probs=230.1
Q ss_pred CCCCCeEEccCCCCC----CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhc------CCCCCCCCcEE
Q 043334 612 TPNSGLIHMDVDQSF----LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNF------GFPIDINAEFI 676 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~----~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~------G~~~~pe~~I~ 676 (903)
..++++|+|+.|.|+ +.+++.+.+++.+.+.. |....|.+++|+++++++.+.+ |...+++ +|+
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~-~i~ 108 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD-NVV 108 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh-hEE
Confidence 477899999999987 45788899988877652 6666799999999999998765 3556666 999
Q ss_pred ecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCC
Q 043334 677 YADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPT 756 (903)
Q Consensus 677 vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~ 756 (903)
+|+|+++++..++.+++++||+|+++.|+|+.|...++..|++++.++++.+++|.+|++.+++.+++++ +++++++||
T Consensus 109 it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~-~~i~~~~p~ 187 (412)
T PTZ00433 109 LCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRT-KALIMTNPS 187 (412)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCc-eEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999876678999999999887765 589999998
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 757 INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 757 ~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
||||.+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..++.. .++|+++||||+||+||+
T Consensus 188 -NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~--~~----~~~~~~~----~~~i~~~SfSK~~~~pGl 256 (412)
T PTZ00433 188 -NPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATF--TS----VADFDTT----VPRVILGGTAKNLVVPGW 256 (412)
T ss_pred -CCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCc--cc----hhhccCC----CceEEEccchhhcCCCCe
Confidence 999999999999999999999999999999999998876432 11 2223221 368999999999999999
Q ss_pred eeeEEEe--C---cHHHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 837 KFGFLVL--N---HPQLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 837 RiG~lv~--~---~~~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|+||+++ + .+++++.+.++.. ..++++++|.++..+|. ++ .+.+++++++.|++|++.++
T Consensus 257 RlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~--~~----~~~~~~~~~~~~~~~r~~l~ 322 (412)
T PTZ00433 257 RLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALL--NT----PQEHLEQIVAKLEEGAMVLY 322 (412)
T ss_pred eEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHh--cC----cHHHHHHHHHHHHHHHHHHH
Confidence 9999997 2 1337888877654 46789999999999994 22 24788999999999998875
No 38
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.2e-35 Score=338.08 Aligned_cols=297 Identities=11% Similarity=0.060 Sum_probs=224.7
Q ss_pred hccCCCCHHHHHHHHhhhhccCCCCCeEEccCCC---CCCCCc--HHHHHHHHHHHH-----ccCCCCCchHHHHHHHHH
Q 043334 591 MIGFSRSAISVLNSAELSITETPNSGLIHMDVDQ---SFLPIP--SLVKAAIFESFA-----RQNMSESEIDVTPSIQQY 660 (903)
Q Consensus 591 ~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~---p~~~~p--~~v~~al~~al~-----~y~~~~G~~~lr~ala~~ 660 (903)
+..++.+.+..+..... ....+++|+|+.|. ++..+| +.+.+++.+.+. .|.+..|.+++|++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 81 (396)
T PRK09257 5 LEAAPADPILGLMEAFR---ADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL 81 (396)
T ss_pred CCCCCCChHHHHHHHHh---hCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence 34556666666554222 12345789999996 433444 677888777653 377788999999999999
Q ss_pred HHhhcCCCCCCCCcE--EecCchHHHHHHHHHHh--ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHH
Q 043334 661 IKSNFGFPIDINAEF--IYADCSQSLFNKLVLCC--ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEK 736 (903)
Q Consensus 661 l~~~~G~~~~pe~~I--~vt~Gs~~al~~ll~~l--~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~ 736 (903)
+.+..+...+++ +| ++|+|+++++..+++.+ ++|||+|++++|+|+.|..+++..|++++.+|+..+++|.+|++
T Consensus 82 ~~~~~~~~~~~~-~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~ 160 (396)
T PRK09257 82 LFGADSPALAAG-RVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFD 160 (396)
T ss_pred hcCCCCcccccC-eEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHH
Confidence 987655555666 66 99999999999998665 58999999999999999999999999999999854456889999
Q ss_pred HHHHHhhcC--CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccC
Q 043334 737 TLVTILETV--KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSS 814 (903)
Q Consensus 737 ~L~~~l~~~--~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~ 814 (903)
.+++.++.. .+.++++++|| ||||.++|.+++++|+++|+++|++||+||+|.++.|+.... . ..+..+...
T Consensus 161 ~l~~~~~~~~~~~~~~i~~~p~-NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~----~-~~~~~~~~~ 234 (396)
T PRK09257 161 AMLADLSQAPAGDVVLLHGCCH-NPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEED----A-YGLRAFAAA 234 (396)
T ss_pred HHHHHHHhCCCCCEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHH----H-HHHHHHHhc
Confidence 999887632 22355557886 999999999999999999999999999999999988752210 0 112223322
Q ss_pred CCCCCceEEEccCchhcccccceeeEEEe--Cc-H---HHHHHHHhCCC--CCCCcHHHHHHHHHHHhccccc-chhHHH
Q 043334 815 TNSSFNVSLLGGLSLKMLTGALKFGFLVL--NH-P---QLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERK-ARDLMN 885 (903)
Q Consensus 815 ~~~~~~vI~l~S~SK~~g~~GlRiG~lv~--~~-~---~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~-~~~~~~ 885 (903)
.+++|+++||||+|+++|||+||+++ ++ + .++..+..... ..+++.+.|.++..+|. ++. .+.+++
T Consensus 235 ---~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~ 309 (396)
T PRK09257 235 ---GLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILN--DPELRAEWEA 309 (396)
T ss_pred ---CCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhC--CHHHHHHHHH
Confidence 14899999999999999999999984 33 2 14444444332 55678999999999994 331 123468
Q ss_pred HHHHHHHHHHHHHHHHh
Q 043334 886 AVAEHIRNLESRSKRLK 902 (903)
Q Consensus 886 ~l~~~r~~y~~Rr~~l~ 902 (903)
+++++++.|++||+.++
T Consensus 310 ~~~~~r~~~~~rr~~l~ 326 (396)
T PRK09257 310 ELEEMRERIKAMRQLLV 326 (396)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999999886
No 39
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-35 Score=331.78 Aligned_cols=288 Identities=18% Similarity=0.237 Sum_probs=239.0
Q ss_pred hhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhc
Q 043334 590 EMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNF 665 (903)
Q Consensus 590 ~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~ 665 (903)
++.+...+.++.+..... ..+++|+|+.|+|++++++.+.+++.+.+.. |.+..|.+++|+++++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~ 78 (382)
T PRK06108 4 AARALPESGIREVANAGR-----GREGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLH 78 (382)
T ss_pred hhhhCCchHHHHHHHHHh-----ccCCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 344455556666654322 2357899999999999999999998887653 6667899999999999999988
Q ss_pred CCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCC-CCcccCHHHHHHHhhc
Q 043334 666 GFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESE-VGFKMTEKTLVTILET 744 (903)
Q Consensus 666 G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~-~~f~ld~~~L~~~l~~ 744 (903)
|...+++ +|++|+|+++++..++.+++++||.|++++|+|+.|...++..|++++.+|++.+ ++|.+|++.+++.+++
T Consensus 79 ~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~ 157 (382)
T PRK06108 79 GVATPPE-RIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP 157 (382)
T ss_pred CCCcCcc-eEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc
Confidence 9777776 9999999999999999999999999999999999999999999999999999753 4688999999998876
Q ss_pred CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccC-CCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 745 VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFN-YEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 745 ~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~-~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
++ +++++++|+ ||||.++|.+++++|+++|+++|++||+||+|+++.|+ +... . +... +... .+++++
T Consensus 158 ~~-~~i~l~~p~-NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~--~---~~~~-~~~~---~~~~i~ 226 (382)
T PRK06108 158 RT-RALFINSPN-NPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRA--P---SFLD-IAEP---DDRIIF 226 (382)
T ss_pred cc-eEEEEECCC-CCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCC--C---CHhh-cCCC---cCCEEE
Confidence 65 589999997 99999999999999999999999999999999999886 2221 1 1122 2111 258999
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++||||.||++|+|+||++++++ +++.+.+... ..+++.+.|.++..+|. ++ .++++++++.++++++.+
T Consensus 227 ~~S~SK~~g~~G~RiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~q~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l 298 (382)
T PRK06108 227 VNSFSKNWAMTGWRLGWLVAPPA-LGQVLEKLIEYNTSCVAQFVQRAAVAALD--EG-----EDFVAELVARLRRSRDHL 298 (382)
T ss_pred EeechhhccCcccceeeeeCCHH-HHHHHHHHHHhcccCCChHHHHHHHHHHh--CC-----hHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887 8888876643 56788999999999994 33 356778888888888876
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 299 ~ 299 (382)
T PRK06108 299 V 299 (382)
T ss_pred H
Confidence 5
No 40
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.9e-35 Score=334.66 Aligned_cols=291 Identities=17% Similarity=0.244 Sum_probs=245.1
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
+++++..+....++.+..... ..+++|+|+.|+|++++++.+.+++.+++.. |.+..|.+++|+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 84 (391)
T PRK08361 10 IAGRINLIQRSKIRELFERAS-----KMENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYK 84 (391)
T ss_pred hhHHHHhCCccHHHHHHHHHH-----hhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHH
Confidence 566776666666766654432 2357899999999998888888888887653 6567899999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|...+++ +|++|+|+++++..++.+++++||.|++++|+|+.+...++..|++++.+|++.+++|.+|++.+++.+
T Consensus 85 ~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 163 (391)
T PRK08361 85 KFYGVDVDVD-NVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELI 163 (391)
T ss_pred HHhCCCCCcc-cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhc
Confidence 8888887777 999999999999999999999999999999999999999999999999999987667899999999998
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ +++++++|+ ||||.+++.+++++|+++|++++++||+||+|.++.|++... . +... +.. ++++
T Consensus 164 ~~~~-~~v~i~~p~-NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~--~---~~~~-~~~-----~~~i 230 (391)
T PRK08361 164 TKRT-RMIVINYPN-NPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKH--Y---PMIK-YAP-----DNTI 230 (391)
T ss_pred cccc-EEEEEeCCC-CCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCC--C---CHhh-cCC-----CCEE
Confidence 8766 589999998 999999999999999999999999999999999988865432 1 1111 111 4799
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.||++|+|+||++++++ +++.+.+... ..+++.+.|.++..+|. ++ ...++++++++.|++|++.
T Consensus 231 ~~~s~SK~~~~~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~---~~~~~~~~~~~~~~~~~~~ 304 (391)
T PRK08361 231 LANSFSKTFAMTGWRLGFVIAPEQ-VIKDMIKLHAYIIGNVASFVQIAGIEALR--SK---ESWKAVEEMRKEYNERRKL 304 (391)
T ss_pred EEecCchhcCCcHhhhhhhccCHH-HHHHHHHHHhhhccCCChHHHHHHHHHhc--CC---cccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 8888876653 56788899999999994 33 1235788999999999988
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
++
T Consensus 305 ~~ 306 (391)
T PRK08361 305 VL 306 (391)
T ss_pred HH
Confidence 75
No 41
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.3e-34 Score=331.26 Aligned_cols=290 Identities=16% Similarity=0.232 Sum_probs=238.3
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
+++++.....+.++.+..... ..+++|+|+.|+|++++++.+.+++.+++.. |.+..|.+++|+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 81 (391)
T PRK07309 7 FNKQLDKIEVSLIRQFDQSIS-----DIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVK 81 (391)
T ss_pred HHhhhhhcCccHHHHHHHHHH-----hcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHH
Confidence 355566666666666654222 2357999999999998888888888877643 5567789999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|+..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++. ++|.+|++.+++++
T Consensus 82 ~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~ 160 (391)
T PRK07309 82 EKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKAI 160 (391)
T ss_pred HHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHHh
Confidence 88998776544899999999999999999999999999999999999999999999999999864 56889999999988
Q ss_pred hcC--CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc
Q 043334 743 ETV--KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN 820 (903)
Q Consensus 743 ~~~--~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~ 820 (903)
+.. ..+++++++|+ ||||.+++.+++++|+++|++||++||+||+|.++.|++... .+ .. .+.. ++
T Consensus 161 ~~~~~~~~~i~l~~P~-NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~--~~---~~-~~~~-----~~ 228 (391)
T PRK07309 161 LEQGDKLKAVILNYPA-NPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH--VS---IA-EYLP-----DQ 228 (391)
T ss_pred hccCCCeEEEEEECCC-CCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCC--CC---HH-Hhcc-----CC
Confidence 642 23589999997 999999999999999999999999999999999999966432 12 11 1211 48
Q ss_pred eEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 821 VSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 821 vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
+|+++||||.||+||+|+||++++++ +++.+.+... ..+++.+.|.++..+|. ++ ..+...+++.|++|+
T Consensus 229 ~i~~~S~SK~~g~~GlRvG~~v~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~ 300 (391)
T PRK07309 229 TILINGLSKSHAMTGWRIGLIFAPAE-FTAQLIKSHQYLVTAATTMAQFAAVEALT--NG-----KDDALPMKKEYIKRR 300 (391)
T ss_pred EEEEecChhhccCccceeEEEEeCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHh--CC-----hhHHHHHHHHHHHHH
Confidence 99999999999999999999999987 9988887643 46788999999999994 33 123456788888888
Q ss_pred HHHh
Q 043334 899 KRLK 902 (903)
Q Consensus 899 ~~l~ 902 (903)
+.++
T Consensus 301 ~~~~ 304 (391)
T PRK07309 301 DYII 304 (391)
T ss_pred HHHH
Confidence 8765
No 42
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=5.4e-35 Score=336.28 Aligned_cols=264 Identities=14% Similarity=0.173 Sum_probs=217.8
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---------cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---------QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---------y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
.++++++|+.|+|++++++.+.+++.+++.+ |.+..|.+++|+++++++.+.+|+..+|+ +|++|+|+++
T Consensus 32 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I~it~Ga~~ 110 (409)
T PRK07590 32 PEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISAD-EIFISDGAKC 110 (409)
T ss_pred CCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChh-hEEECCCHHH
Confidence 3668999999999999999888888887653 55678999999999999988889888887 9999999999
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCE-----------EEEecCCCCCCcccCHHHHHHHhhcCCCcEEEE
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKAN-----------IVNIPTESEVGFKMTEKTLVTILETVKKPWVYI 752 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~-----------vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil 752 (903)
++..+. .+++|||+|++++|+|+.|...++..|++ +++++++.+++|.+|.+. +++ +++++
T Consensus 111 al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~~~-k~i~l 182 (409)
T PRK07590 111 DTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------EKV-DIIYL 182 (409)
T ss_pred HHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------cCc-eEEEE
Confidence 999864 56789999999999999999999999997 999999766677766432 334 58999
Q ss_pred ECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcc
Q 043334 753 SGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKML 832 (903)
Q Consensus 753 ~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g 832 (903)
++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.|++... ..+..++... +++|+++||||+||
T Consensus 183 ~nP~-NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~------~~~~~~~~~~---~~vi~~~SfSK~~~ 252 (409)
T PRK07590 183 CFPN-NPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLP------HSIYEIEGAR---ECAIEFRSFSKTAG 252 (409)
T ss_pred eCCC-CCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCC------cchhhCCCcc---cceEEEecCccccC
Confidence 9997 999999999999999999999999999999999988866421 1122233321 47999999999999
Q ss_pred cccceeeEEEeCcHHHHHH------------HHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 833 TGALKFGFLVLNHPQLVDA------------FSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 833 ~~GlRiG~lv~~~~~li~~------------l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
+||+|+||++++++ +++. +..... ..+++.++|.++..+|. ..+ ..|++++++.|++||
T Consensus 253 ~pGlRiG~~i~~~~-li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~-~~~-----~~~~~~~~~~~~~~r 325 (409)
T PRK07590 253 FTGTRCAYTVVPKE-LKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYS-PEG-----KAQIKELIDYYMENA 325 (409)
T ss_pred CcCceeEEEEcCHH-HhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhc-CCc-----HHHHHHHHHHHHHHH
Confidence 99999999999987 7762 222222 34688999999999884 122 368889999999999
Q ss_pred HHHh
Q 043334 899 KRLK 902 (903)
Q Consensus 899 ~~l~ 902 (903)
+.+.
T Consensus 326 ~~l~ 329 (409)
T PRK07590 326 KIIR 329 (409)
T ss_pred HHHH
Confidence 9875
No 43
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=330.96 Aligned_cols=294 Identities=13% Similarity=0.113 Sum_probs=242.4
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l~ 662 (903)
++|+..+.++.+..+.+... -.++.+.+.|+|+.|+|++++++.+.+++.+.+. .|.+..|.+++|+++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 81 (386)
T PRK07550 3 NPLIAALFPPPIPEVRAWLA-GYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYS 81 (386)
T ss_pred chhhhhcCChHHHHHHHHHH-HHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHH
Confidence 44555555556665554211 0124577899999999998888888888887653 25566799999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|...+++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++++++|.+|++.+++.+
T Consensus 82 ~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~ 160 (386)
T PRK07550 82 RLYGAAISPE-QVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALI 160 (386)
T ss_pred HHhCCCCCcc-eEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHh
Confidence 9999888777 999999999999999999999999999999999999999999999999999986678889999999999
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ +++++++|+ ||||.++|.+++++|+++|+++|++||+||+|+++.+++... . +.+.. ... .++++
T Consensus 161 ~~~~-~~v~~~~P~-NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~--~---~~~~~-~~~---~~~~i 229 (386)
T PRK07550 161 TPRT-RAIALVTPN-NPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAP--H---DLFAD-PDW---DDTLV 229 (386)
T ss_pred cccC-cEEEEeCCC-CCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCC--c---chhhC-CCc---cccEE
Confidence 8766 588999998 999999999999999999999999999999999886643221 1 11211 111 24899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.||+||+|+||++++++ +++.+.+... ..+++.++|.++..+|. + +++|+++.++.|++|++.
T Consensus 230 ~~~S~SK~~g~~G~RiG~i~~~~~-~~~~~~~~~~~~~~~~s~~~q~~~~~~l~--~-----~~~~~~~~~~~~~~~~~~ 301 (386)
T PRK07550 230 HLYSFSKSYALTGHRVGAVVASPA-RIAEIEKFMDTVAICAPRIGQIAVAWGLP--N-----LADWRAGNRAEIARRRDA 301 (386)
T ss_pred EEecchhhccCcccceEeeecCHH-HHHHHHHHHhhcccCCCcHHHHHHHHHhc--c-----HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 8888887664 56678999999999993 2 357888889999999987
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
++
T Consensus 302 l~ 303 (386)
T PRK07550 302 FR 303 (386)
T ss_pred HH
Confidence 75
No 44
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.5e-35 Score=342.94 Aligned_cols=280 Identities=16% Similarity=0.234 Sum_probs=224.6
Q ss_pred CCCeEEccCCCCCC--CC-cHHHHHHHHH------H------HHccCCCCCchHHHHHHHHHHHhhcC--CCCCCCCcEE
Q 043334 614 NSGLIHMDVDQSFL--PI-PSLVKAAIFE------S------FARQNMSESEIDVTPSIQQYIKSNFG--FPIDINAEFI 676 (903)
Q Consensus 614 ~~~~IdLs~g~p~~--~~-p~~v~~al~~------a------l~~y~~~~G~~~lr~ala~~l~~~~G--~~~~pe~~I~ 676 (903)
+.++|+|+.++|.+ +. ++++++.... . +..|....|.+++|+++++++.+.+| ++.+|+ +|+
T Consensus 45 p~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-~Iv 123 (496)
T PLN02376 45 PHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-RVV 123 (496)
T ss_pred CCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-hEE
Confidence 44799999999987 33 5555554332 1 12356678999999999999999888 667777 999
Q ss_pred ecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHH-HcCCEEEEecCCCCCCcccCHHHHHHHhhc-----CCCcEE
Q 043334 677 YADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAAR-FLKANIVNIPTESEVGFKMTEKTLVTILET-----VKKPWV 750 (903)
Q Consensus 677 vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~-~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-----~~~~~v 750 (903)
+|+|+++++..++.++++|||.|++++|+|+.|...++ ..|+++++++++.+++|.+|++.+++++.. .+.+++
T Consensus 124 it~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l 203 (496)
T PLN02376 124 MSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGL 203 (496)
T ss_pred EccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence 99999999999999999999999999999999999887 589999999998767899999999766421 233589
Q ss_pred EEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCC-CCCCceEEEccCch
Q 043334 751 YISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSST-NSSFNVSLLGGLSL 829 (903)
Q Consensus 751 il~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~-~~~~~vI~l~S~SK 829 (903)
+++||+ ||||.++|.+++++|+++|++++++||+||+|+++.|++... .++.+.....+... + .+++++++||||
T Consensus 204 ~l~nP~-NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~--~si~~l~~~~~~~~~~-~~~v~vv~S~SK 279 (496)
T PLN02376 204 ILTNPS-NPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDF--VSVAEVVNDVDISEVN-VDLIHIVYSLSK 279 (496)
T ss_pred EEcCCC-CCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCc--ccHHHhhccccccccC-CCeEEEEEeccc
Confidence 999998 999999999999999999999999999999999999987542 22222211111000 0 136888999999
Q ss_pred hcccccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 830 KMLTGALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 830 ~~g~~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.||+||+|+||++++++.+++.+.+......++++.|.++..+|. ++ +.+++++.+.++.|++|++.+.
T Consensus 280 ~~glpGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~--d~--~~~~~~l~~~r~~l~~r~~~l~ 348 (496)
T PLN02376 280 DMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLS--DD--QFVDNFLMESSRRLGIRHKVFT 348 (496)
T ss_pred cCCCCcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhC--Ch--hHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997765777776666666789999999999994 33 2236788899999999999875
No 45
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-34 Score=329.11 Aligned_cols=290 Identities=16% Similarity=0.213 Sum_probs=237.8
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYI 661 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l 661 (903)
+++++..+..+.+..+....+ ..++.++|+.|.|++++|+.+.+++.+.+. .|....|.+++|+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l 78 (389)
T PRK05957 4 FTSRMDAVQSPIIPVVGQLIR-----ENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKL 78 (389)
T ss_pred hhHHHHhcCCcHHHHHHHHHH-----hCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 355666666666654443322 235789999999999999999999888764 2566789999999999999
Q ss_pred HhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHH
Q 043334 662 KSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTI 741 (903)
Q Consensus 662 ~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~ 741 (903)
++.+|...++.++|++|+|+++++..++.+++++||.|++++|+|+.+...++..|++++.++++ ++|.+|++.+++.
T Consensus 79 ~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~ 156 (389)
T PRK05957 79 QQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQA 156 (389)
T ss_pred HHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHh
Confidence 99889876633389999999999999999999999999999999999999999999999999985 4678999999999
Q ss_pred hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 742 LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 742 l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
+++++ +++++++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.|++... .+. . .+... ..++
T Consensus 157 i~~~~-klv~~~~p~-NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~--~~~---~-~~~~~---~~~~ 225 (389)
T PRK05957 157 ITPKT-RAIVTISPN-NPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKH--FSP---G-SIPGS---GNHT 225 (389)
T ss_pred cCcCc-eEEEEeCCC-CCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCc--cCh---h-hCCCc---cCcE
Confidence 98766 489999997 999999999999999999999999999999999998875331 111 1 12121 2489
Q ss_pred EEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 822 SLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 822 I~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
|+++||||.||+||+|+||++++++ +++++..... ..+++.+.|.++..+|+ ++ ..++++.++.|++||+
T Consensus 226 i~~~S~SK~~g~~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~r~ 297 (389)
T PRK05957 226 ISLYSLSKAYGFASWRIGYMVIPIH-LLEAIKKIQDTILICPPVVSQYAALGALQ--VG-----KSYCQQHLPEIAQVRQ 297 (389)
T ss_pred EEEecchhhccCccceeEEEecCHH-HHHHHHHHHhhcccCCCcHHHHHHHHHHh--CC-----hHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 9999987764 55678899999999994 33 2456667777888888
Q ss_pred HHh
Q 043334 900 RLK 902 (903)
Q Consensus 900 ~l~ 902 (903)
.++
T Consensus 298 ~l~ 300 (389)
T PRK05957 298 ILL 300 (389)
T ss_pred HHH
Confidence 765
No 46
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=2e-34 Score=329.12 Aligned_cols=289 Identities=16% Similarity=0.193 Sum_probs=241.2
Q ss_pred hhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhh
Q 043334 589 TEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSN 664 (903)
Q Consensus 589 ~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~ 664 (903)
+++..++.+.++.+.... ...++++|+.|.|+.+.|+.+.+++.+.+.. |....|.+++|+++++++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~ 77 (387)
T PRK07777 4 SRLRPFGTTIFAEMSALA------VRTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRR 77 (387)
T ss_pred hhhhhcCccHHHHHHHHH------hhCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 345666777777666432 2347899999999988877788877776653 556688999999999999998
Q ss_pred cCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCC-CCcccCHHHHHHHhh
Q 043334 665 FGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESE-VGFKMTEKTLVTILE 743 (903)
Q Consensus 665 ~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~-~~f~ld~~~L~~~l~ 743 (903)
+|.+.+++++|++|+|+++++..++.+++++||+|+++.|+|+.|...++..|++++.++++++ ++|.+|++++++.++
T Consensus 78 ~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~ 157 (387)
T PRK07777 78 YGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT 157 (387)
T ss_pred hCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC
Confidence 9998877657999999999999999999999999999999999999999999999999999865 478899999999887
Q ss_pred cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 744 TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
+++ ++|++++|+ ||||.+++.+++++|+++|++++++||+||+|.++.|++... .+ +..+++. .+++|+
T Consensus 158 ~~~-~~v~l~~p~-NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~--~~----~~~~~~~---~~~~i~ 226 (387)
T PRK07777 158 PRT-RALIVNSPH-NPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARH--LP----LATLPGM---RERTVT 226 (387)
T ss_pred ccc-EEEEEcCCC-CCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCc--cc----HhhCCCC---cCcEEE
Confidence 766 589999997 999999999999999999999999999999999999866532 11 2222222 258999
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++||||.||+||+|+||++++++ +++.+.+... ..+.+++.|.++..++. ++ +.|++++++.|++|++++
T Consensus 227 ~~S~SK~~g~~GlRiG~~~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~l 298 (387)
T PRK07777 227 ISSAAKTFNVTGWKIGWACGPAP-LIAAVRAAKQYLTYVGGAPFQPAVAHALD--HE-----DAWVAALRDSLQAKRDRL 298 (387)
T ss_pred EeechhhccCcCceeEEEecCHH-HHHHHHHHHhhcccCCCCHHHHHHHHHHh--CC-----cHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 9988887654 45678889999998884 33 367888999999999887
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 299 ~ 299 (387)
T PRK07777 299 A 299 (387)
T ss_pred H
Confidence 5
No 47
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.2e-34 Score=326.59 Aligned_cols=263 Identities=16% Similarity=0.227 Sum_probs=224.8
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI 693 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~ 693 (903)
+++|+.|+|++++++.+.+++.+... .|....|.+++|+++++++++.+|++.+++++|++|+|+++++..++.+++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~ 81 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI 81 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc
Confidence 68999999999988888888877543 376678999999999999999899988876689999999999999999999
Q ss_pred cCC---CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 694 LEG---GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 694 ~pG---D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++| |.|++++|+|+.|...++..|++++.++++.+++|.+|++++++++++++ +++++++|+ ||||.+++.++++
T Consensus 82 ~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-~~i~i~~p~-NPtG~~~~~~~~~ 159 (350)
T TIGR03537 82 DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEET-KIVWINYPH-NPTGATAPRSYLK 159 (350)
T ss_pred CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhcc-EEEEEeCCC-CCcCcccCHHHHH
Confidence 988 69999999999999999999999999999866789999999999988766 589999998 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
+|+++|+++|++||+||+|.++.+++... + +..++ . +++|+++||||.+|+||+|+||+++++. +++
T Consensus 160 ~l~~~a~~~~~~ii~De~y~~~~~~~~~~---~----~~~~~-~----~~~i~~~s~SK~~g~~GlRiG~~~~~~~-~~~ 226 (350)
T TIGR03537 160 ETIAMCREHGIILCSDECYTEIYFGEPPH---S----ALEVG-I----ENVLAFHSLSKRSGMTGYRSGFVAGDEK-LIS 226 (350)
T ss_pred HHHHHHHHcCcEEEEeccccccccCCCCC---c----hhhcC-c----CCEEEEeecccccCCccccceeeecCHH-HHH
Confidence 99999999999999999999887765332 1 11121 1 4899999999999999999999999877 998
Q ss_pred HHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 851 AFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.+... ..+.+...|.++..++. +. +++++.++.|++|++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~q~~~~~~l~--~~------~~~~~~r~~l~~~~~~~~ 272 (350)
T TIGR03537 227 FLRKLRANFGVASPDFVQAAAKAAWS--DD------NHVLERRKIFKRKRDLFI 272 (350)
T ss_pred HHHHHHHhhccCCCHHHHHHHHHHhC--Cc------HHHHHHHHHHHHHHHHHH
Confidence 8887654 44555678888888873 22 567788888888888764
No 48
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.9e-35 Score=334.38 Aligned_cols=295 Identities=12% Similarity=0.037 Sum_probs=219.4
Q ss_pred cCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC-CCCCcHHHHHHHHHHH---------HccCCCCCchHHHHHHHHHHH
Q 043334 593 GFSRSAISVLNSAELSITETPNSGLIHMDVDQS-FLPIPSLVKAAIFESF---------ARQNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 593 ~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p-~~~~p~~v~~al~~al---------~~y~~~~G~~~lr~ala~~l~ 662 (903)
+++.+.+..+....+ ...+++.|+|+.|.| +++++....+.+.+++ .+|.+..|.+++|+++++|+.
T Consensus 10 ~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~ 86 (404)
T PTZ00376 10 LGPPDPILGLAAAFK---ADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLF 86 (404)
T ss_pred cCCCChHHHHHHHHh---hcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhc
Confidence 344455555443211 123568899999996 4555544444444442 237778999999999999997
Q ss_pred hhcCCCCCCCCcEE--ecCchHHHHHHHHH---HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHH
Q 043334 663 SNFGFPIDINAEFI--YADCSQSLFNKLVL---CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKT 737 (903)
Q Consensus 663 ~~~G~~~~pe~~I~--vt~Gs~~al~~ll~---~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~ 737 (903)
+..+...+++ +|+ .|.|+++++..++. ++++|||+|++++|+|+.|...++..|++++.+|+.++++|.+|++.
T Consensus 87 ~~~~~~~~~~-~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~ 165 (404)
T PTZ00376 87 GEASYALAEK-RIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDG 165 (404)
T ss_pred CCCccccccC-eEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHH
Confidence 7666666766 888 58999999888764 67899999999999999999999999999999999655568899999
Q ss_pred HHHHhhc--CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCC
Q 043334 738 LVTILET--VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSST 815 (903)
Q Consensus 738 L~~~l~~--~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~ 815 (903)
+++.+.. ..+.++++++|| ||||.++|.+++++|+++|++|+++||+||+|.++.|++... .. ..+..+....
T Consensus 166 l~~~~~~~~~~~~~~~~~~p~-NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~---~~-~~~~~~~~~~ 240 (404)
T PTZ00376 166 MLEDLRTAPNGSVVLLHACAH-NPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDK---DA-YAIRLFAERG 240 (404)
T ss_pred HHHHHHhCCCCCEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHH---HH-HHHHHHHhcC
Confidence 9998853 222467779997 999999999999999999999999999999999999864210 00 1122222221
Q ss_pred CCCCceEEEccCchhcccccceeeEE---EeCcHHHHH----HHHhCCC--CCCCcHHHHHHHHHHHhccccc-chhHHH
Q 043334 816 NSSFNVSLLGGLSLKMLTGALKFGFL---VLNHPQLVD----AFSSFPG--LSKPHSTVRYAIKKLLGLRERK-ARDLMN 885 (903)
Q Consensus 816 ~~~~~vI~l~S~SK~~g~~GlRiG~l---v~~~~~li~----~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~-~~~~~~ 885 (903)
+++|+++||||+|++||||+||+ +++++ +++ .+.+... ..+++.++|.++..+|. ++. .+.+.+
T Consensus 241 ---~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~ 314 (404)
T PTZ00376 241 ---VEFLVAQSFSKNMGLYGERIGALHIVCANKE-EAANVLSQLKLIIRPMYSSPPIHGARIADRILS--DPELRAEWLS 314 (404)
T ss_pred ---CcEEEEEeCCCcccccccccceEEEEeCCHH-HHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhC--CHHHHHHHHH
Confidence 48999999999999999999998 45554 444 4443332 44567899999999994 331 122335
Q ss_pred HHHHHHHHHHHHHHHHh
Q 043334 886 AVAEHIRNLESRSKRLK 902 (903)
Q Consensus 886 ~l~~~r~~y~~Rr~~l~ 902 (903)
+++++++.|++||+.+.
T Consensus 315 ~~~~~~~~~~~~r~~l~ 331 (404)
T PTZ00376 315 ELKEMSGRIQNMRQLLY 331 (404)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57778889999999875
No 49
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.6e-34 Score=334.67 Aligned_cols=278 Identities=16% Similarity=0.196 Sum_probs=225.5
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHH----------------HHccCCCCCchHHHHHHHHHHHhhcCC--CCCCCCc
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFES----------------FARQNMSESEIDVTPSIQQYIKSNFGF--PIDINAE 674 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~a----------------l~~y~~~~G~~~lr~ala~~l~~~~G~--~~~pe~~ 674 (903)
++.++|+|++.+|.+. ...+.+.+.+. +..|....|.+.+|+++++++.+++|. +.+|+ +
T Consensus 45 np~g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~-~ 122 (447)
T PLN02607 45 NPSGVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD-R 122 (447)
T ss_pred CCCceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH-H
Confidence 5567999999999763 33334433332 122555679999999999999998873 57777 9
Q ss_pred EEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHH-HcCCEEEEecCCCCCCcccCHHHHHHHhhc-----CCCc
Q 043334 675 FIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAAR-FLKANIVNIPTESEVGFKMTEKTLVTILET-----VKKP 748 (903)
Q Consensus 675 I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~-~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-----~~~~ 748 (903)
|++|+|+++++.+++.++++|||.|+++.|+|+.|...+. ..|+++++++++.+++|.+|++.++++++. .+.+
T Consensus 123 Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk 202 (447)
T PLN02607 123 IVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVR 202 (447)
T ss_pred eEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCee
Confidence 9999999999999999999999999999999999998887 589999999998777899999999998864 2335
Q ss_pred EEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhc--cCCCCCCceEEEcc
Q 043334 749 WVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLY--SSTNSSFNVSLLGG 826 (903)
Q Consensus 749 ~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~--~~~~~~~~vI~l~S 826 (903)
+++++||+ ||||.++|.+++++|+++|++++++||+||+|+++.|++... .+..+....++ +.+ +++++++|
T Consensus 203 ~lll~nP~-NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f--~S~~s~~~~~~~~~~~---~~v~vi~s 276 (447)
T PLN02607 203 GVLITNPS-NPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEF--VSVAEIVEARGYKGVA---ERVHIVYS 276 (447)
T ss_pred EEEEeCCC-CCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc--ccHHHHHhhcCCCCCc---CcEEEEEc
Confidence 89999998 999999999999999999999999999999999999976432 23222221111 111 58999999
Q ss_pred CchhcccccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 827 LSLKMLTGALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 827 ~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|||.||++|+|+||+++.++.+++++.+.....+++++.|.++..+|+ ++ +..+.++...++.|++|++.+.
T Consensus 277 ~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~--d~--~~~~~~l~~~r~~l~~~~~~~~ 348 (447)
T PLN02607 277 LSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLS--DE--EFTENYIRTNRERLRKRYEMIV 348 (447)
T ss_pred chhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhC--Cc--hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999996665888888776666789999999999994 33 2235788899999999998775
No 50
>PLN02231 alanine transaminase
Probab=100.00 E-value=2.4e-34 Score=338.79 Aligned_cols=299 Identities=12% Similarity=0.159 Sum_probs=232.2
Q ss_pred ccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH--------ccCCCCCchHHHHHHHHHHHh
Q 043334 592 IGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA--------RQNMSESEIDVTPSIQQYIKS 663 (903)
Q Consensus 592 ~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~--------~y~~~~G~~~lr~ala~~l~~ 663 (903)
...+.+.++.+... ...+++|+++.+.+.+|. .+++...+.+. .|.++.|.+++|+++++++++
T Consensus 112 ~~~~~~~~r~v~~~------~~~p~~i~~~~~~~~fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~ 183 (534)
T PLN02231 112 GQQPITFFREVLAL------CDHPSLLDKSETHGLFSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEA 183 (534)
T ss_pred CCCccHHHHHHHHh------ccCCccCCCCCccccCCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHh
Confidence 44555666666643 234689999988777765 44444444433 266788999999999999999
Q ss_pred hcCCCCCCCCcEEecCchHHHHHHHHHHhcc-CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 664 NFGFPIDINAEFIYADCSQSLFNKLVLCCIL-EGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 664 ~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~-pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
++|.+.+++ +|++|+|+++++..++.+++. +||.|+++.|+|+.|...++..|+++++++++++++|.+|+++|++.+
T Consensus 184 r~g~~~~pe-~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l 262 (534)
T PLN02231 184 RDGFPADPN-DIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQL 262 (534)
T ss_pred ccCCCCCcc-cEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHH
Confidence 899998888 999999999999999999984 799999999999999999999999999999987778999999999988
Q ss_pred hcC-----CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCC-CCCCCCchhhhhhhhccCCC
Q 043334 743 ETV-----KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNY-EGWGGWDLEGCLSKLYSSTN 816 (903)
Q Consensus 743 ~~~-----~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~-~~~s~~s~~~~~~~l~~~~~ 816 (903)
++. ..++++++||+ ||||.++|.+++++|+++|+++|++||+||+|.++.|++ ... .++......++ ..+
T Consensus 263 ~~~~~~~~~~k~ivl~nP~-NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~--~s~~~~~~~~g-~~~ 338 (534)
T PLN02231 263 EDARSKGITVRALVVINPG-NPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKF--HSFKKVARSMG-YGE 338 (534)
T ss_pred HHHhhcCCCeEEEEEeCCC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCc--ccHHHHHhhhc-ccc
Confidence 651 23589999997 999999999999999999999999999999999999964 222 22222111111 100
Q ss_pred CCCceEEEccCchhc-ccccceeeEEEeC--cHHHHHHHHhCCC-CCCCcHHHHHHHHHHHhcc---cccchhHHHHHHH
Q 043334 817 SSFNVSLLGGLSLKM-LTGALKFGFLVLN--HPQLVDAFSSFPG-LSKPHSTVRYAIKKLLGLR---ERKARDLMNAVAE 889 (903)
Q Consensus 817 ~~~~vI~l~S~SK~~-g~~GlRiG~lv~~--~~~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~---~~~~~~~~~~l~~ 889 (903)
.+.++|+++||||.+ |+||||+||++++ ++++++.+.++.. ..+++...|.++..++... ++..+.+.++.+.
T Consensus 339 ~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~ 418 (534)
T PLN02231 339 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDG 418 (534)
T ss_pred CCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHH
Confidence 013799999999976 8999999999873 3448998887665 5667788899888888411 1112233445667
Q ss_pred HHHHHHHHHHHHhC
Q 043334 890 HIRNLESRSKRLKE 903 (903)
Q Consensus 890 ~r~~y~~Rr~~l~e 903 (903)
+++.|++|++++.+
T Consensus 419 i~~~~~~r~~~l~~ 432 (534)
T PLN02231 419 ILSSLARRAKTLED 432 (534)
T ss_pred HHHHHHHHHHHHHH
Confidence 78999999998753
No 51
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=3.5e-34 Score=328.69 Aligned_cols=271 Identities=16% Similarity=0.284 Sum_probs=228.2
Q ss_pred CCCCCeEEccCCCCC----CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH
Q 043334 612 TPNSGLIHMDVDQSF----LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ 682 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~----~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~ 682 (903)
..++++++|++|+|+ +++++.+.+++.+.+.+ |.+..|.+++|+++++++.+ .|...+++ +|++|+|++
T Consensus 28 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~~~~~~~~-~i~~t~G~~ 105 (401)
T TIGR01264 28 NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-PDGPIEAD-DVVLCSGCS 105 (401)
T ss_pred hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-cCCCCCHH-HEEECcChH
Confidence 346789999999985 77888899988887653 55677899999999999987 46667766 999999999
Q ss_pred HHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCccc
Q 043334 683 SLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGL 762 (903)
Q Consensus 683 ~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~ 762 (903)
+++..++.+++++||+|++++|+|+.|...++..|++++.++++.+++|.+|++.+++.+++++ +++++++|+ ||||.
T Consensus 106 ~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~-~~v~~~~p~-NPtG~ 183 (401)
T TIGR01264 106 HAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKT-AALIVNNPS-NPCGS 183 (401)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCc-eEEEEcCCC-CCCCC
Confidence 9999999999999999999999999999999999999999999766678899999999887666 589999998 99999
Q ss_pred CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 763 LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..+.. +.++|+++||||+|++||+|+||++
T Consensus 184 ~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~--~~----~~~~~~----~~~vi~~~SfSK~~~~~GlRiG~iv 253 (401)
T TIGR01264 184 VFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATF--EP----LASLSS----TVPILSCGGLAKRWLVPGWRLGWII 253 (401)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCccc--cc----HHHcCC----CCcEEEEccCcccCCCccceEEEEE
Confidence 9999999999999999999999999999999876432 11 222222 1369999999999999999999999
Q ss_pred eCcH-----HHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 843 LNHP-----QLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 843 ~~~~-----~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++. .+++.+.++.. ..+++.+.|.++..+|. +. .+++++++++.|++||+.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~--~~----~~~~l~~~~~~~~~~r~~l~ 313 (401)
T TIGR01264 254 IHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILL--RT----PQEYFDGTLSVLESNAMLCY 313 (401)
T ss_pred ecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHH--hC----cHHHHHHHHHHHHHHHHHHH
Confidence 9851 26666666544 56788999999999994 22 14788999999999998875
No 52
>PRK07324 transaminase; Validated
Probab=100.00 E-value=8.1e-35 Score=330.80 Aligned_cols=261 Identities=11% Similarity=0.110 Sum_probs=224.9
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
..+.++++|++|+|++++|+.+ +++.+++.+ |....|.+++|+++++++. ++ +++ +|++|+|+++++.+
T Consensus 23 ~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~--~~~-~vi~t~G~~~al~~ 95 (373)
T PRK07324 23 IAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NV--KPE-NILQTNGATGANFL 95 (373)
T ss_pred cccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CC--Chh-hEEEcCChHHHHHH
Confidence 4678899999999999888877 777666654 6677899999999999874 23 444 89999999999999
Q ss_pred HHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHH
Q 043334 688 LVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNK 767 (903)
Q Consensus 688 ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~e 767 (903)
++.+++++||+|+++.|+|+.+...++..|++++.+|++.+++|.+|++++++.+++++ +++++++|+ ||||.+++.+
T Consensus 96 ~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~-kli~i~~p~-NPtG~~~~~~ 173 (373)
T PRK07324 96 VLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNT-KLICINNAN-NPTGALMDRA 173 (373)
T ss_pred HHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCC-cEEEEeCCC-CCCCCCCCHH
Confidence 99999999999999999999999999999999999999877789999999999888776 599999998 9999999999
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHH
Q 043334 768 EIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQ 847 (903)
Q Consensus 768 el~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~ 847 (903)
++++|+++|+++|++||+||+|.++.|++... +... . . +++|+++||||.||+||||+||+++++.
T Consensus 174 ~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~------s~~~-~--~----~~~I~~~s~SK~~~~~G~RiG~i~~~~~- 239 (373)
T PRK07324 174 YLEEIVEIARSVDAYVLSDEVYRPLDEDGSTP------SIAD-L--Y----EKGISTNSMSKTYSLPGIRVGWIAANEE- 239 (373)
T ss_pred HHHHHHHHHHHCCCEEEEEccccccccCCCCC------Chhh-c--c----CCEEEEecchhhcCCccceeEEEecCHH-
Confidence 99999999999999999999999988865421 1111 1 1 3789999999999999999999999866
Q ss_pred HHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 848 LVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 848 li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++++.+++. ..+++.++|.++..+|. + .+.+++++++.+++|++.+.
T Consensus 240 li~~~~~~~~~~~~~~~~~~q~~a~~~l~--~-----~~~~l~~~~~~~~~~~~~l~ 289 (373)
T PRK07324 240 VIDILRKYRDYTMICAGVFDDMLASLALE--H-----RDAILERNRKIVRTNLAILD 289 (373)
T ss_pred HHHHHHHHhCcEEecCChHHHHHHHHHHc--C-----HHHHHHHHHHHHHHHHHHHH
Confidence 9999998875 56788899999998883 2 24688899999999998764
No 53
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-34 Score=326.37 Aligned_cols=293 Identities=17% Similarity=0.247 Sum_probs=238.5
Q ss_pred hhhhccCCCCHHHHHHHH-hhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHh
Q 043334 588 STEMIGFSRSAISVLNSA-ELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKS 663 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a-~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~ 663 (903)
++++..+..+.++.+... .. ....+.++++|+.|.|++++|+.+.+++.+... .|.+..|.+++|+++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 81 (397)
T PRK07568 4 SKRVLNMPASPIRKLVPYADE--AKKRGIKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKK 81 (397)
T ss_pred hhHhhhCCcchHHHHHHHHHH--HHhhCCCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHH
Confidence 444445555566665531 11 012456799999999999889999888876543 366678999999999999984
Q ss_pred hcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCccc-CHHHHHHHh
Q 043334 664 NFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKM-TEKTLVTIL 742 (903)
Q Consensus 664 ~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~l-d~~~L~~~l 742 (903)
+|...+++ +|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++++.+++|.+ +++.+++++
T Consensus 82 -~~~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~ 159 (397)
T PRK07568 82 -WGIDVEPD-EILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLI 159 (397)
T ss_pred -hCCCCCcc-eEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhc
Confidence 78777776 999999999999999999999999999999999999999999999999999975567764 689999988
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..+.+.. ++++
T Consensus 160 ~~~~-~~v~i~~p~-NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~--~s----~~~~~~~~---~~~i 228 (397)
T PRK07568 160 TPKT-KAILISNPG-NPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKY--TS----ALSLEGLE---DRVI 228 (397)
T ss_pred Cccc-eEEEEECCC-CCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCc--cC----hhhcCCCc---CCEE
Confidence 7766 589999998 999999999999999999999999999999999998876432 11 22222221 5899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
+++||||.||+||+|+||++++++++++.+.+... ..+++.+.|.++..+|. ++ +++++++++.|++|++.+
T Consensus 229 ~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~l 301 (397)
T PRK07568 229 IIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLD--TP-----ESYFDEVREEYKKRRDIL 301 (397)
T ss_pred EEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhh--CC-----HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999976558888776544 46788999999999994 33 368888999999999887
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 302 ~ 302 (397)
T PRK07568 302 Y 302 (397)
T ss_pred H
Confidence 5
No 54
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=5.3e-34 Score=327.59 Aligned_cols=297 Identities=14% Similarity=0.209 Sum_probs=230.4
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC---CCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQS---FLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQY 660 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p---~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~ 660 (903)
.|+++..++++.+..+.....+ .+..++++++|+.|+| ++++++.+.+++.+.+. .|....|.+++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~ 84 (404)
T PRK09265 6 KSSKLENVCYDIRGPVLKEAKR-LEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQY 84 (404)
T ss_pred hhHHHHhcCcchhHHHHHHHHH-HHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHH
Confidence 4556666777766655532221 1357789999999988 45678888888776544 367778999999999999
Q ss_pred HHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHH
Q 043334 661 IKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVT 740 (903)
Q Consensus 661 l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~ 740 (903)
+....+...+++ +|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++++.+++|.+|++.+++
T Consensus 85 ~~~~~~~~~~~~-~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~ 163 (404)
T PRK09265 85 YQQKGIPDVDVD-DIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRS 163 (404)
T ss_pred HhccCCCCCCcc-cEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHH
Confidence 986544356666 9999999999999999999999999999999999999999999999999998766678899999999
Q ss_pred HhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc
Q 043334 741 ILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN 820 (903)
Q Consensus 741 ~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~ 820 (903)
.+++++ +++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..+.. +.+
T Consensus 164 ~~~~~~-~~v~l~~P~-NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~--~~----~~~~~~----~~~ 231 (404)
T PRK09265 164 KITPRT-KAIVIINPN-NPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVH--IS----IASLAP----DLL 231 (404)
T ss_pred hccccc-eEEEEECCC-CCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCc--CC----HHHcCC----Cce
Confidence 987766 589999998 999999999999999999999999999999999999876432 11 222222 247
Q ss_pred eEEEccCchhcccccceeeEEEeC-cHH----HHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHH
Q 043334 821 VSLLGGLSLKMLTGALKFGFLVLN-HPQ----LVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNL 894 (903)
Q Consensus 821 vI~l~S~SK~~g~~GlRiG~lv~~-~~~----li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y 894 (903)
+|+++||||+||+||+|+||++++ +.. +++.+..... ..+++.++|.++..+|. +. +.+..++.. ++.+
T Consensus 232 vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~--~~~~~~~~~-~~~~ 306 (404)
T PRK09265 232 CVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALG--GY--QSINELILP-GGRL 306 (404)
T ss_pred EEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhc--Cc--hhHHHHHHH-HHHH
Confidence 999999999999999999999974 221 4455543322 56788999999999994 22 112233332 2345
Q ss_pred HHHHHHHh
Q 043334 895 ESRSKRLK 902 (903)
Q Consensus 895 ~~Rr~~l~ 902 (903)
+++|+.+.
T Consensus 307 ~~~r~~~~ 314 (404)
T PRK09265 307 YEQRDRAW 314 (404)
T ss_pred HHHHHHHH
Confidence 66666654
No 55
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=3.7e-34 Score=328.20 Aligned_cols=269 Identities=16% Similarity=0.232 Sum_probs=227.0
Q ss_pred CCCCCeEEccCCCC---CCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 612 TPNSGLIHMDVDQS---FLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 612 ~~~~~~IdLs~g~p---~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
..+.++|+|+.|.| ++++++.+.+++.+.+.. |.+..|.+++|+++++++.+.+|+..+++ +|++|+|++++
T Consensus 27 ~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~a 105 (398)
T PRK08363 27 KKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPD-DVRVTAAVTEA 105 (398)
T ss_pred hcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChh-hEEEeCCHHHH
Confidence 46778999999999 678899999999887753 55678999999999999999889888877 99999999999
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCC
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLY 764 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~ 764 (903)
+..++.+++++||.|++++|+|+.+...++..|++++.++..++++|.+|++.+++.+++++ +++++++|+ ||||.++
T Consensus 106 l~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~-~~v~l~~p~-NPtG~~~ 183 (398)
T PRK08363 106 LQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKT-KAIAVINPN-NPTGALY 183 (398)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcce-EEEEEECCC-CCCCcCc
Confidence 99999999999999999999999999999999999999843334578899999999987766 589999997 9999999
Q ss_pred CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe-
Q 043334 765 SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL- 843 (903)
Q Consensus 765 s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~- 843 (903)
+.+++++|+++|+++|++||+||+|.++.|++... + +..+... .++|+++||||.|++||+|+||+++
T Consensus 184 ~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~---~----~~~~~~~----~~vi~~~SfSK~~~~~GlRiG~~~~~ 252 (398)
T PRK08363 184 EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHV---S----PGSLTKD----VPVIVMNGLSKVYFATGWRLGYIYFV 252 (398)
T ss_pred CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCccc---C----HHHcCcC----CcEEEEecchhccCCccceEEEEEEe
Confidence 99999999999999999999999999998876432 1 2223322 4799999999999999999999998
Q ss_pred -CcHHHHHHHHhCC-----CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 844 -NHPQLVDAFSSFP-----GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 844 -~~~~li~~l~~~~-----~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++ +++.+.... ...+++.+.|.++..+|. +. ++++.+.++.|++|++.+.
T Consensus 253 ~~~~-~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~--~~-----~~~l~~~~~~~~~~~~~l~ 309 (398)
T PRK08363 253 DPEG-KLAEVREAIDKLARIRLCPNTPAQFAAIAGLT--GP-----MDYLEEYMKKLKERRDYIY 309 (398)
T ss_pred CcHH-HHHHHHHHHHHHhcccccCChHHHHHHHHHHh--CC-----hHHHHHHHHHHHHHHHHHH
Confidence 444 666554332 146789999999999994 22 3688888899999988775
No 56
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=4.7e-34 Score=327.01 Aligned_cols=269 Identities=17% Similarity=0.179 Sum_probs=226.3
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..++++++|+.|+|+..+|+.+.+++.+.+. .|.+..|.+++|+++++++.+++|...+++++|++|+|+++++.
T Consensus 26 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~ 105 (395)
T PRK08175 26 RRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLA 105 (395)
T ss_pred hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHH
Confidence 3567899999999998888878777777653 36667899999999999999988998877657999999999999
Q ss_pred HHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc---CCCcEEEEECCCCCCcccC
Q 043334 687 KLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET---VKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 687 ~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~---~~~~~vil~~P~~NPTG~v 763 (903)
.++..+++|||+|++++|+|+.+...++..|++++.++++++++ +.+.+++.++. ++ +++++++|+ ||||.+
T Consensus 106 ~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~-~~v~i~~p~-NPtG~~ 180 (395)
T PRK08175 106 HLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKP-KMMILGFPS-NPTAQC 180 (395)
T ss_pred HHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCc-eEEEEeCCC-CCCCCC
Confidence 99999999999999999999999999999999999999986544 36778777763 34 589999997 999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
++.+++++|+++|+++|++||+||+|.++.|++... . + +..++.. .+++|+++||||.||+||+|+||+++
T Consensus 181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~--~---~-~~~~~~~---~~~~i~~~S~SK~~g~pGlRiG~~~~ 251 (395)
T PRK08175 181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKA--P---S-IMQVPGA---KDVAVEFFTLSKSYNMAGWRIGFMVG 251 (395)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCC--c---c-hhcCCCc---ccCEEEEeeccccccCcchhheeeeC
Confidence 999999999999999999999999999998865432 1 1 1222222 14789999999999999999999999
Q ss_pred CcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 844 NHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 844 ~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++ +++++.+... ..+++++.|.++..+|. +. +.+++.+++.|++|+++++
T Consensus 252 ~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~~~ 304 (395)
T PRK08175 252 NPE-LVSALARIKSYHDYGTFTPLQVAAIAALE--GD-----QQCVRDIAEQYKRRRDVLV 304 (395)
T ss_pred CHH-HHHHHHHHHhhcccCCCcHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHHHH
Confidence 887 9999988764 56677889999999993 32 4688899999999998875
No 57
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-34 Score=336.59 Aligned_cols=265 Identities=12% Similarity=0.136 Sum_probs=208.8
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHH-ccCCCCCchHHHHHHHHHHH-hhcCCCCCC--CCcEEecCchHHHHHHHHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFA-RQNMSESEIDVTPSIQQYIK-SNFGFPIDI--NAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~-~y~~~~G~~~lr~ala~~l~-~~~G~~~~p--e~~I~vt~Gs~~al~~ll~~ 691 (903)
++|+|++|+|++++|+.+.+....... .|..+.|.+++|+++++++. +.++....+ +++|++|+|+++++..++.+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~a 180 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGIIGDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDS 180 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHH
Confidence 479999999999999988885544332 37778899999999998554 433332222 33899999999999998886
Q ss_pred -----hccCCCeEEEcCCCcHHHHHHHHHcC--CEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCC
Q 043334 692 -----CILEGGTLCFPAGSNGNYVSAARFLK--ANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLY 764 (903)
Q Consensus 692 -----l~~pGD~Vlv~~P~y~~~~~~~~~~G--~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~ 764 (903)
+++|||+|++++|+|+.|...++..| +++++++++++++|.+|++.+++++++++ ++++++||+ ||||.++
T Consensus 181 L~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~t-kai~l~nP~-NPTG~v~ 258 (527)
T PRK09275 181 LKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSI-KALFLVNPS-NPPSVAM 258 (527)
T ss_pred HhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCC-CEEEEeCCc-CCcCCCC
Confidence 68999999999999999999988875 56666766666789999999999888777 599999998 9999999
Q ss_pred CHHHHHHHHHHHHh--CCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 765 SNKEIENILTVCAK--YGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 765 s~eel~eI~~ia~k--~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
|.+++++|+++|++ ++++||+||+|..+.+ ... +.... .+ +++|+++||||+||++|||+||++
T Consensus 259 s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~------s~~~~---~~---~~~I~v~SfSK~f~mtG~RlG~i~ 324 (527)
T PRK09275 259 SDESLEKIADIVNEKRPDLMIITDDVYGTFVD--DFR------SLFAV---LP---YNTILVYSFSKYFGATGWRLGVIA 324 (527)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--ccc------CHHHh---CC---CCEEEEeehhhhccCcHhHHhhhh
Confidence 99999999999964 5999999999987664 221 12222 22 489999999999999999999999
Q ss_pred eCcHHHHHHH------------------------------------HhCCC--CCCCcHHHHHHH-----HHHHhccccc
Q 043334 843 LNHPQLVDAF------------------------------------SSFPG--LSKPHSTVRYAI-----KKLLGLRERK 879 (903)
Q Consensus 843 ~~~~~li~~l------------------------------------~~~~~--~~~~s~~~Q~aa-----~~~L~~~~~~ 879 (903)
++++++++++ ++++. ..+++++.|.++ .++|. ..
T Consensus 325 ~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~--~~- 401 (527)
T PRK09275 325 LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLD--EE- 401 (527)
T ss_pred cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh--Cc-
Confidence 9986333322 23332 678899999972 33452 22
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhC
Q 043334 880 ARDLMNAVAEHIRNLESRSKRLKE 903 (903)
Q Consensus 880 ~~~~~~~l~~~r~~y~~Rr~~l~e 903 (903)
+++++++++.|++||+.+++
T Consensus 402 ----~~~~~~~~~~~~~Rr~~l~~ 421 (527)
T PRK09275 402 ----DAYKKAMKDIIRRRYKALYE 421 (527)
T ss_pred ----hHHHHHHHHHHHHHHHHHHH
Confidence 46889999999999998763
No 58
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.7e-34 Score=325.49 Aligned_cols=257 Identities=12% Similarity=0.160 Sum_probs=212.5
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc--cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR--QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~--y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
.+.++|+|+.|+|++++|+.+++++.+.+.. +++..|.+++|+++++++ |++ ++ +|++|+|+++++..++.
T Consensus 27 ~~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~g~~~Lr~aia~~~----~~~--~~-~I~vt~Gs~e~i~~~~~ 99 (366)
T PRK01533 27 GDHSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDGGATTLRQTIANKL----HVK--ME-QVLCGSGLDEVIQIISR 99 (366)
T ss_pred CCCceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCCCHHHHHHHHHHHh----CCC--cc-eEEECCCHHHHHHHHHH
Confidence 4567999999999999999999998876542 345668889999998876 554 44 99999999999999999
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
+++++||.|++++|+|+.|...++..|++++.++++ ++.+|++++++++++++ +++++|+|| ||||.+++.++++
T Consensus 100 ~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~-~~v~i~~P~-NPTG~~~~~~~l~ 174 (366)
T PRK01533 100 AVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDT-KIVWICNPN-NPTGTYVNDRKLT 174 (366)
T ss_pred HhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCC-cEEEEeCCC-CCCCCCcCHHHHH
Confidence 999999999999999999999999999999999985 34589999999887766 589999998 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
+|+++|++++ ++|+||+|.++.+++... +.+..++.. +++|+++||||+||+||+|+||++++++ +++
T Consensus 175 ~l~~~~~~~~-~~iiDe~y~~~~~~~~~~------~~~~~~~~~----~~vi~~~SfSK~~~l~GlRiG~~i~~~~-~~~ 242 (366)
T PRK01533 175 QFIEGISENT-LIVIDEAYYEYVTAKDFP------ETLPLLEKH----KNILVLRTFSKAYGLASFRVGYAVGHEE-LIE 242 (366)
T ss_pred HHHHhCCCCC-EEEEEccHHHhhccccCc------chhHHhccC----CCEEEEeCchHHhcChHHHHhHHhCCHH-HHH
Confidence 9999998876 566799998777654321 122223322 4899999999999999999999999877 999
Q ss_pred HHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 851 AFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 851 ~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
.+.+....++++.++|.++..+|+ ++ ++.+.+++.++++++++
T Consensus 243 ~l~~~~~~~~~~~~~q~aa~~~l~--~~------~~~~~~~~~~~~~r~~~ 285 (366)
T PRK01533 243 KLNVVRLPFNVSSLAQKAATIAFG--DD------EFIEEIVRVNTEGLRQY 285 (366)
T ss_pred HHHHhcCCCCcCHHHHHHHHHHhC--CH------HHHHHHHHHHHHHHHHH
Confidence 999887778899999999999994 32 45555555555555544
No 59
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-33 Score=322.45 Aligned_cols=296 Identities=19% Similarity=0.257 Sum_probs=246.8
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
+|+++.+.+++.+..+...... ....++++++|+.|+|++++++.+.+++.+.+.. |....|.+.+|+++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 82 (393)
T PRK05764 4 LSKRVSRVTPSATLAVTAKAKE-LKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLK 82 (393)
T ss_pred hhhhhhhcCchHHHHHHHHHHH-HHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHH
Confidence 5778888888887766642211 1235678999999999999889999988887653 6667788999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|...+++ +|++|+|+++++..++.+++++||.|++++|+|..+..+++..|++++.++++.+++|.+|++.+++.+
T Consensus 83 ~~~~~~~~~~-~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 161 (393)
T PRK05764 83 RDNGLDYDPS-QVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAI 161 (393)
T ss_pred HHhCCCCCHH-HEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhh
Confidence 9888777776 999999999999999999999999999999999999999999999999999986678999999999998
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ +++++++|+ ||||.++|.+++++|+++|+++|++||+||+|+++.|++... .+ ......+. .++++
T Consensus 162 ~~~~-~~v~~~~p~-NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~--~~---~~~~~~~~---~~~~i 231 (393)
T PRK05764 162 TPKT-KALILNSPS-NPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEF--TS---IASLSPEL---RDRTI 231 (393)
T ss_pred Cccc-eEEEEECCC-CCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCc--cc---HHHcCCCC---cCCEE
Confidence 7666 589999998 999999999999999999999999999999999988865432 11 11111122 14899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.++++|+|+||++++++ +++.+..... ..+++.+.|.++..+|. .. +++++++++.|+++++.
T Consensus 232 ~~~s~SK~~~~~G~RiG~i~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~ 303 (393)
T PRK05764 232 TVNGFSKAYAMTGWRLGYAAGPKE-LIKAMSKLQSHSTSNPTSIAQYAAVAALN--GP-----QDEVEEMRQAFEERRDL 303 (393)
T ss_pred EEecCcccccCccceeEEEecCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHc--CC-----hHHHHHHHHHHHHHHHH
Confidence 999999999999999999999877 9999887764 56789999999999994 12 36777888888888776
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 304 l~ 305 (393)
T PRK05764 304 MV 305 (393)
T ss_pred HH
Confidence 64
No 60
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-33 Score=320.86 Aligned_cols=259 Identities=17% Similarity=0.196 Sum_probs=213.0
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhc--CCCCCCCCcEEecCchHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNF--GFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~--G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
+.+++|+.|+|++++|+.+.+++.+++.. .++..|.+++|+++++++++.+ |+..+++ +|++|+|+++++..
T Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~-~I~it~Ga~~al~~ 106 (374)
T PRK02610 28 IQLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPA-NISVGNGSDELIRS 106 (374)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHH-HEEEcCChHHHHHH
Confidence 35899999999999999999999876543 1234688999999999998876 5667776 99999999999998
Q ss_pred HHHHhccCCC-eEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc---CCCcEEEEECCCCCCcccC
Q 043334 688 LVLCCILEGG-TLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET---VKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 688 ll~~l~~pGD-~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~---~~~~~vil~~P~~NPTG~v 763 (903)
++.+++.+|| .|++++|+|+.|...++..|++++.+++++ ++|.+|+++++++++. ...+++++++|| ||||.+
T Consensus 107 ~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~-NPTG~~ 184 (374)
T PRK02610 107 LLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPN-SPTGNP 184 (374)
T ss_pred HHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCC-CCCCCC
Confidence 8888888886 899999999999999999999999999864 4688999999998864 334699999997 999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
+|.+++++|+++| ++++||+||+|.++.+. . ....+... .++|+++||||+||+||+|+||+++
T Consensus 185 ~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~--~--------~~~~~~~~----~~~ivi~SfSK~~g~~GlRiG~~v~ 248 (374)
T PRK02610 185 LTAAELEWLRSLP--EDILVVIDEAYFEFSQT--T--------LVGELAQH----PNWVILRTFSKAFRLAAHRVGYAIG 248 (374)
T ss_pred CCHHHHHHHHhcc--CCcEEEEeccccccCcc--c--------hHHHHhcC----CCEEEEEecchhccCcccceeeeec
Confidence 9999999999876 49999999999876532 1 11222222 3789999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 844 NHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 844 ~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
+++ +++.+.+.+..++++.+.|.++..+|. +. +.+.+.+++.+++ |+.+
T Consensus 249 ~~~-l~~~l~~~~~~~~~~~~~q~a~~~~l~--~~-----~~~~~~~~~~~~~-r~~l 297 (374)
T PRK02610 249 HPE-LIAVLEKVRLPYNLPSFSQLAAQLALE--HR-----QELLAAIPEILQE-RDRL 297 (374)
T ss_pred CHH-HHHHHHHhcCCCCCCHHHHHHHHHHhc--CH-----HHHHHHHHHHHHH-HHHH
Confidence 887 999999887767789999999998883 22 3566666666665 4444
No 61
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-33 Score=301.90 Aligned_cols=271 Identities=15% Similarity=0.205 Sum_probs=239.7
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHc--cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFAR--QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~--y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
..+++.|.+.+.|++.|+.+++++.+.++. |+++++..++.+++.+|.+++|+....++ .|+++.|...++..+++.
T Consensus 24 ~~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e-~i~~~p~VVpgi~~~I~~ 102 (388)
T COG1168 24 NEDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPE-WIVFVPGVVPGISLAIRA 102 (388)
T ss_pred CCCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcc-eEEEcCcchHhHHHHHHH
Confidence 478999999999999999999999999876 56677888899999999999999999988 699999999999999999
Q ss_pred hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCC-CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 692 CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTES-EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~-~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
+.+|||.|++..|.|+++....+..|.+++..|+.. ++.|.+|.++|++++.+...+++++|||| ||||.+++.+|+.
T Consensus 103 ~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPH-NP~Grvwt~eeL~ 181 (388)
T COG1168 103 LTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPH-NPTGRVWTKEELR 181 (388)
T ss_pred hCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCC-CCCCccccHHHHH
Confidence 999999999999999999999999999999999974 45699999999999987766799999997 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCC-CCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGW-GGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~-s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
+|.++|++||+.||+||+|++++|.+..+ ++.++.+ .. .++.|.+.|.||+|+++|+++++++.+++.+.
T Consensus 182 ~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~------~~---a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr 252 (388)
T COG1168 182 KIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSE------RF---ADNSITLTSASKTFNLAGLKCAYIIISNRELR 252 (388)
T ss_pred HHHHHHHHcCCEEEeecccccccccCCCccchhhcCh------hh---hcceEEEeeccccccchhhhheeEEecCHHHH
Confidence 99999999999999999999999999654 2222211 11 25899999999999999999999999998776
Q ss_pred HHHHhC-C--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSF-P--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~-~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.+. . ...++|.++-.|...+. ++| ..|++++++.++.+++++.
T Consensus 253 ~~~~~~l~~~~~~~~n~lg~~A~~aAY--~~G-----~~WLd~L~~yl~~N~~~~~ 301 (388)
T COG1168 253 AKFLKRLKRNGLHGPSALGIIATEAAY--NQG-----EPWLDELLEYLKDNRDYVA 301 (388)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHH--Hhc-----hHHHHHHHHHHHHHHHHHH
Confidence 666543 2 27788999999999999 456 4899999999999998875
No 62
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-33 Score=317.21 Aligned_cols=256 Identities=17% Similarity=0.219 Sum_probs=215.9
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+.++|+|+.|+|++++|+.+.+++.+.+.. |. ..|.+++|+++++++ ++ +++ +|++|+|+++++..++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~~~~lr~~ia~~~----~~--~~~-~I~it~G~~~al~~~~ 99 (357)
T PRK14809 28 DPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYP-KASHADLTAALADRW----DV--SPE-QVWLANGGDGALDYLA 99 (357)
T ss_pred CccceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCC-CCCHHHHHHHHHHHh----CC--Ccc-eEEECCCHHHHHHHHH
Confidence 4668999999999999999988888776532 43 467888999988875 44 444 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.++++|||.|++++|+|+.|...+...|++++.++++.+++|.++.+.+.+... ++ ++++++||+ ||||.++|.+++
T Consensus 100 ~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-~~-k~i~l~~p~-NPTG~~~s~~~~ 176 (357)
T PRK14809 100 RAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD-GE-RIVYLTSPH-NPTGSEIPLDEV 176 (357)
T ss_pred HHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-CC-cEEEEeCCC-CCCCcCCCHHHH
Confidence 999999999999999999999999999999999999766688899988877653 34 599999998 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
++|+++|++ +++||+||+|.++.+++.. ...+.. .+++++++||||.||+||+|+||++++++ ++
T Consensus 177 ~~l~~~~~~-~~~iI~De~y~~~~~~~~~---------~~~~~~----~~~vi~~~SfSK~~~~~GlRiG~~~~~~~-~~ 241 (357)
T PRK14809 177 EALAERTDE-ETLVVVDEAYGEFAERPSA---------VALVEE----RDDVAVLRTFSKAYGLAGLRLGYAVVPEE-WA 241 (357)
T ss_pred HHHHHhCcc-CcEEEEechhhhccCCchh---------HHHHhh----CCCEEEEecchhHhcCcchhheeeecCHH-HH
Confidence 999999875 7899999999988764321 122222 25899999999999999999999999987 99
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+.++....+++.+.|.++..+|. + ++++++.++.|++||+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~a~~~l~--~------~~~~~~~~~~~~~~r~~l~ 286 (357)
T PRK14809 242 DAYARVNTPFAASELACRAGLAALD--D------DEHVERTVETARWAREYIR 286 (357)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHhC--C------HHHHHHHHHHHHHHHHHHH
Confidence 9999887777889999999999994 2 2678888899999998875
No 63
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=9.5e-34 Score=328.14 Aligned_cols=260 Identities=12% Similarity=0.107 Sum_probs=217.0
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
+..+++|+.|.|+.++++.+.+++.+... .|....|.+++|+++++++.+..+ .++ +|++|+|+++++..++.
T Consensus 84 ~~~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~-~Iiit~G~~~al~~~~~ 159 (431)
T PRK15481 84 GTPLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCP---VAF-EIDLTSGAIDAIERLLC 159 (431)
T ss_pred cchhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccC---CcC-eEEEecCcHHHHHHHHH
Confidence 34688999999988776777777666432 477788999999999999876433 223 89999999999999999
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEE-CCCCCCcccCCCHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYIS-GPTINPTGLLYSNKEI 769 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~-~P~~NPTG~v~s~eel 769 (903)
++++|||.|++++|+|+.|...++..|++++.+|+++ ++ +|++.+++++++++ ++++++ ||| ||||.++|.+++
T Consensus 160 ~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~g--~~~~~l~~~~~~~~-k~i~~~p~p~-NPTG~~~s~~~~ 234 (431)
T PRK15481 160 AHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA-EG--MQPEKLERALAQGA-RAVILTPRAH-NPTGCSLSARRA 234 (431)
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC-CC--CCHHHHHHHHhcCC-CEEEECCCCC-CCCCccCCHHHH
Confidence 9999999999999999999999999999999999964 33 78999999887655 577776 887 999999999999
Q ss_pred HHHHHHHHhC-CcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 770 ENILTVCAKY-GARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 770 ~eI~~ia~k~-~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
++|+++|+++ +++||+||+|.++.+++.. + .+. .. .+++|+++||||+|+ ||+|+||++++++ +
T Consensus 235 ~~l~~la~~~~~~~ii~De~Y~~~~~~~~~-~------~~~---~~---~~~vi~~~SfSK~~~-~GlRiG~~i~~~~-~ 299 (431)
T PRK15481 235 AALRNLLARYPQVLVIIDDHFALLSSSPYH-S------VIP---QT---TQRWALIRSVSKALG-PDLRLAFVASDSA-T 299 (431)
T ss_pred HHHHHHHHhcCCceEEecCchhhhccCCCC-C------CCc---CC---CCCEEEEeeeccccC-CCceeEEEeCCHH-H
Confidence 9999999999 9999999999988765422 1 111 11 148999999999999 9999999999987 8
Q ss_pred HHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 849 VDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 849 i~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.+.+... ..+++.+.|.++..+|+ ++ .+++|++++++.|++||+.++
T Consensus 300 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~--~~---~~~~~l~~~~~~~~~~r~~~~ 350 (431)
T PRK15481 300 SARLRLRLNSGTQWVSHLLQDLVYACLT--DP---EYQARLAQARLFYAQRRQKLA 350 (431)
T ss_pred HHHHHHHHhccccCCCHHHHHHHHHHHh--Cc---cHHHHHHHHHHHHHHHHHHHH
Confidence 998876543 45689999999999994 33 356789999999999999886
No 64
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=5.6e-33 Score=319.00 Aligned_cols=272 Identities=14% Similarity=0.253 Sum_probs=228.6
Q ss_pred CCCCCeEEccCCCCC----CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH
Q 043334 612 TPNSGLIHMDVDQSF----LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ 682 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~----~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~ 682 (903)
..+.++++|+.|+|. +++++.+.+++.+.+.. |.+..|.+++|+++++++...+|...+++ +|++|+|++
T Consensus 28 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~ii~t~G~t 106 (403)
T TIGR01265 28 NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTAD-DVVLTSGCS 106 (403)
T ss_pred hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHH-HEEEecChH
Confidence 357899999999974 67888899988887653 45567889999999999998778877766 999999999
Q ss_pred HHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCccc
Q 043334 683 SLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGL 762 (903)
Q Consensus 683 ~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~ 762 (903)
+++..++.+++++||+|++++|+|+.+...++..|++++.++++.+++|.+|++.+++.+++++ +++++++|+ ||||.
T Consensus 107 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~v~i~~p~-NPtG~ 184 (403)
T TIGR01265 107 QAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKT-VAIVVINPS-NPCGS 184 (403)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCc-cEEEEecCC-CCCCC
Confidence 9999999999999999999999999999999999999999998766678899999999887766 589999998 99999
Q ss_pred CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 763 LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
+++.+++++|+++|+++|++||+||+|+++.|++... .+ +..+... .++|+++||||.|++||+|+||++
T Consensus 185 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~--~~----~~~~~~~----~~vi~~~S~SK~~~~pGlRiG~~v 254 (403)
T TIGR01265 185 VFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPF--IP----MASFASI----VPVLSLGGISKRWVVPGWRLGWII 254 (403)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCc--cc----hhhhccC----CcEEEEeecccccCCCcceEEEEE
Confidence 9999999999999999999999999999999876432 11 2223321 479999999999999999999999
Q ss_pred eCc--H----HHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 843 LNH--P----QLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 843 ~~~--~----~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++ . .+++.+.+... ..+++.+.|.++..+|. +. .+.++++.++.|++|++.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~----~~~~~~~~~~~~~~~~~~l~ 315 (403)
T TIGR01265 255 IHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILE--NT----PQEFFDGKISVLKSNAELCY 315 (403)
T ss_pred EeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH--hC----hHHHHHHHHHHHHHHHHHHH
Confidence 853 2 14455555543 56789999999999994 22 14788889999999998875
No 65
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=2.4e-33 Score=317.66 Aligned_cols=279 Identities=17% Similarity=0.237 Sum_probs=223.2
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH--ccCCCCCchHHHHHHHHHHHhh
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA--RQNMSESEIDVTPSIQQYIKSN 664 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~--~y~~~~G~~~lr~ala~~l~~~ 664 (903)
+|++....+...+..+.+... ..+.++++|+.|+|+.+.++.+.+++.+... .|....|.+++|+++++++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~ 78 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAA----AHPDGIVDLSVGTPVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARR 78 (364)
T ss_pred ccccCCCccHHHHHHHHHHHH----hcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHH
Confidence 355555555555666554322 3556799999999887778888888776543 4666789999999999999999
Q ss_pred cCCC-CCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 665 FGFP-IDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 665 ~G~~-~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+|++ .+++ +|++|+|+++++..++..+ +++||.|++++|+|+.|...++..|++++.++. +++++.
T Consensus 79 ~~~~~~~~~-~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~~~l~~-- 146 (364)
T PRK07865 79 RGVTGLDPA-AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS---------LTELGP-- 146 (364)
T ss_pred cCCCCCCcc-cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------hhhCCc--
Confidence 9987 7777 9999999999999988888 799999999999999999999999999998852 222221
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhh-h-ccCCCCCCc
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSK-L-YSSTNSSFN 820 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~-l-~~~~~~~~~ 820 (903)
.++ +++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++...+ .+.. . +.. .++
T Consensus 147 -~~~-~~v~~~~p~-NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~------~~~~~~~~~~---~~~ 214 (364)
T PRK07865 147 -QRP-ALIWLNSPS-NPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVS------ILDPRVCGGD---HTG 214 (364)
T ss_pred -ccc-eEEEEcCCC-CCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCc------cccccccCCc---cce
Confidence 233 589999997 9999999999999999999999999999999999888764321 1110 0 111 258
Q ss_pred eEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 821 VSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 821 vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
+|+++||||.||+||+|+||++++++ +++.+.+... ..+++++.|.++..+|. + .+++++.++.|++|+
T Consensus 215 ~i~~~S~SK~~~~~GlRiG~i~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~------~~~~~~~~~~~~~~~ 285 (364)
T PRK07865 215 LLAVHSLSKQSNLAGYRAGFVAGDPA-LVAELLEVRKHAGMMVPAPVQAAMVAALG--D------DAHVREQRERYARRR 285 (364)
T ss_pred EEEEeechhccCCCceeeEEEecCHH-HHHHHHHHHHhcCCCcCHHHHHHHHHHhC--C------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999887 9998887653 56788999999999994 2 256778888999998
Q ss_pred HHHh
Q 043334 899 KRLK 902 (903)
Q Consensus 899 ~~l~ 902 (903)
+.+.
T Consensus 286 ~~l~ 289 (364)
T PRK07865 286 AVLR 289 (364)
T ss_pred HHHH
Confidence 8775
No 66
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.6e-33 Score=314.26 Aligned_cols=259 Identities=18% Similarity=0.273 Sum_probs=214.2
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
...++++|+.|+|+.++|+.+.+++.+.+.. |. ..+.+++|+++++++ ++ +++ +|++|+|+++++..++
T Consensus 17 ~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~-~~~~~~lr~~ia~~~----~~--~~~-~i~it~Ga~~~l~~~~ 88 (354)
T PRK06358 17 TKNMILDFSANINPLGVPESLKQAITENLDKLVEYP-DPDYLELRKRIASFE----QL--DLE-NVILGNGATELIFNIV 88 (354)
T ss_pred CccceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCC-CccHHHHHHHHHHHh----CC--Chh-hEEECCCHHHHHHHHH
Confidence 3345899999999988899999988876543 43 346778888888876 44 444 9999999999999998
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.++ .+ +.|++++|+|+.|...++..|++++.++++.+++|.+| +.+.+.+.+++ +++++++|| ||||.+++.+++
T Consensus 89 ~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~-~~v~~~~P~-NPtG~~~~~~~~ 163 (354)
T PRK06358 89 KVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEI-DLVFLCNPN-NPTGQLISKEEM 163 (354)
T ss_pred HHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCC-CEEEEeCCC-CCCCCccCHHHH
Confidence 886 44 68999999999999999999999999999876788999 56555555555 588999997 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
++|+++|++++++||+||+|.++.|++... +.+..++.. +++|+++||||+||+||+|+||++++++.++
T Consensus 164 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~------~~~~~~~~~----~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~ 233 (354)
T PRK06358 164 KKILDKCEKRNIYLIIDEAFMDFLEENETI------SMINYLENF----KNLIIIRAFTKFFAIPGLRLGYGLTSNKNLA 233 (354)
T ss_pred HHHHHHHHhcCCEEEEeCcccccCCCccch------hHHHhccCC----CCEEEEEechhhccCcchhheeeecCCHHHH
Confidence 999999999999999999999988876432 223333332 5899999999999999999999999765488
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+.++...++++.+.|.++..+|+ +. +++.+.++.|+++|+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~q~~~~~~l~--~~------~~~~~~~~~~~~~r~~l~ 278 (354)
T PRK06358 234 EKLLQMREPWSINTFADLAGQTLLD--DK------EYIKKTIQWIKEEKDFLY 278 (354)
T ss_pred HHHHHhCCCCcchHHHHHHHHHHhc--cH------HHHHHHHHHHHHHHHHHH
Confidence 9998887777889999999999993 22 567788888888888775
No 67
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-33 Score=317.66 Aligned_cols=259 Identities=17% Similarity=0.216 Sum_probs=215.8
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHH-------ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFA-------RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~-------~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..++|+.|+|++++|+.+.+++.+.+. .| +..|.+++|+++++++++.+|.+.+++ +|++|+|+++++..+
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~-~I~it~G~~~~l~~~ 104 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVE-NVWAANGSNEILQQL 104 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChh-hEEECCCHHHHHHHH
Confidence 569999999999999999999887653 24 345888999999999999999888887 999999999999999
Q ss_pred HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHH
Q 043334 689 VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 689 l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
+.++++|||.|+++.|+|+.|...++..|.+++.++.+ ++|.+|++++++++.....+++++++|+ ||||.+++.++
T Consensus 105 ~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~~i~l~~p~-NPtG~~~~~~~ 181 (368)
T PRK03317 105 LQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAVAAIAEHRPDVVFLTSPN-NPTGTALPLDD 181 (368)
T ss_pred HHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHHHHHhccCCCEEEEeCCC-CCCCCCCCHHH
Confidence 99999999999999999999999999999999998874 4678999999999875444689999998 99999999999
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
+++|++.| +++||+||+|.++.+++.. +.....+.. .++|+++||||.||++|+|+||++++++ +
T Consensus 182 l~~l~~~~---~~~lI~DE~y~~~~~~~~~-------~~~~~~~~~----~~~i~~~SfSK~~g~~GlRiG~~~~~~~-~ 246 (368)
T PRK03317 182 VEAILDAA---PGIVVVDEAYAEFRRSGTP-------SALTLLPEY----PRLVVSRTMSKAFAFAGGRLGYLAAAPA-V 246 (368)
T ss_pred HHHHHHHC---CceEEEeCCchhhcccCCc-------CHHHHHHhC----CCEEEEEechhhhccchhhhhhhhCCHH-H
Confidence 99998877 6899999999987766532 112222222 3799999999999999999999999887 9
Q ss_pred HHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 849 VDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 849 i~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.+.+....+++++++|.++..+|+ +. +++.+.++.++++++.+.
T Consensus 247 ~~~l~~~~~~~~~s~~~~~a~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 292 (368)
T PRK03317 247 VDALRLVRLPYHLSAVTQAAARAALR--HA------DELLASVAALRAERDRVV 292 (368)
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHhh--CH------HHHHHHHHHHHHHHHHHH
Confidence 99998877777889999999999994 22 222333445666666553
No 68
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-33 Score=296.53 Aligned_cols=286 Identities=14% Similarity=0.245 Sum_probs=239.7
Q ss_pred HHHHHHHHhhh-hccCCCCCeEEccCCCCC----CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCC
Q 043334 598 AISVLNSAELS-ITETPNSGLIHMDVDQSF----LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGF 667 (903)
Q Consensus 598 ~i~~l~~a~~a-~~~~~~~~~IdLs~g~p~----~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~ 667 (903)
.++.+..+-.. ......+++|.++.|+|. +++.+.+.+|+.++++. |+++.|...-|+++++|+.+....
T Consensus 43 tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~ 122 (447)
T KOG0259|consen 43 TIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPN 122 (447)
T ss_pred cHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCC
Confidence 46665543111 112233479999999986 55788899999998875 778889999999999999887776
Q ss_pred CCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCC
Q 043334 668 PIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKK 747 (903)
Q Consensus 668 ~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~ 747 (903)
+.+++ +|++|+|..+++..++.++.+||..||+|.|+|+-|...+...|.++..+++-++.+|.+|++.+++.++++|.
T Consensus 123 kl~a~-DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~ 201 (447)
T KOG0259|consen 123 KLTAD-DVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTV 201 (447)
T ss_pred ccCcC-ceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCee
Confidence 77777 99999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred cEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccC
Q 043334 748 PWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGL 827 (903)
Q Consensus 748 ~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~ 827 (903)
+++++||+ ||+|.++|.+.+++|+++|++++++||.||+|.++.|++.+. .+ +..+... -.||.++|+
T Consensus 202 -AivviNP~-NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pf--vp----mg~fssi----VPVitlggi 269 (447)
T KOG0259|consen 202 -AIVVINPN-NPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPF--VP----MGKFSSI----VPVITLGGI 269 (447)
T ss_pred -EEEEeCCC-CCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCc--cc----hhhcccc----CceEeeccc
Confidence 99999998 999999999999999999999999999999999999998874 22 2233322 369999999
Q ss_pred chhcccccceeeEEEeCcH-------HHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 828 SLKMLTGALKFGFLVLNHP-------QLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 828 SK~~g~~GlRiG~lv~~~~-------~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
||.|-.||||+||++..+. ..++.+.+..+ ..+++++.|.|.-..|+.+ . +++.....+.++.+.+
T Consensus 270 sKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kT-p-----~efF~k~~~~lk~na~ 343 (447)
T KOG0259|consen 270 SKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKT-P-----EEFFDKKLSFLKSNAD 343 (447)
T ss_pred ccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhC-h-----HHHHHHHHHHHHhhHH
Confidence 9999999999999998753 24566666655 8899999999999999622 2 3666777777777766
Q ss_pred HHh
Q 043334 900 RLK 902 (903)
Q Consensus 900 ~l~ 902 (903)
+.+
T Consensus 344 l~y 346 (447)
T KOG0259|consen 344 LCY 346 (447)
T ss_pred HHH
Confidence 554
No 69
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=6.2e-33 Score=322.58 Aligned_cols=264 Identities=12% Similarity=0.169 Sum_probs=202.9
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHH-H-ccCCCCCchHHHHHHH-HHHHhhcCCCCCCCC--cEEecCchHHHHHHHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESF-A-RQNMSESEIDVTPSIQ-QYIKSNFGFPIDINA--EFIYADCSQSLFNKLVL 690 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al-~-~y~~~~G~~~lr~ala-~~l~~~~G~~~~pe~--~I~vt~Gs~~al~~ll~ 690 (903)
++|++++|+|++++++.+ .++.+++ . .|..+.|..+++++++ +++.+.++....+.. +|++|+|+++++..++.
T Consensus 95 ~~i~l~~g~p~~~~~~~~-~~~~~~~~~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~ 173 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFL-YEMCDGIIGDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD 173 (521)
T ss_pred HHHhhcCCCCCCCCCHHH-HHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 479999999999976555 4455543 2 3545667777777666 577766554333332 79999999999999887
Q ss_pred H-----hccCCCeEEEcCCCcHHHHHHHHHc--CCEEEEecCCCCCC-----cccCHHHHHHHhhcCCCcEEEEECCCCC
Q 043334 691 C-----CILEGGTLCFPAGSNGNYVSAARFL--KANIVNIPTESEVG-----FKMTEKTLVTILETVKKPWVYISGPTIN 758 (903)
Q Consensus 691 ~-----l~~pGD~Vlv~~P~y~~~~~~~~~~--G~~vv~v~~~~~~~-----f~ld~~~L~~~l~~~~~~~vil~~P~~N 758 (903)
+ +++|||+|++++|+|+.|...++.. |++++.++++.+++ |.+|.+.+++++++++ ++++++||+ |
T Consensus 174 ~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~-kai~l~nP~-N 251 (521)
T TIGR03801 174 SLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSI-KALFVVNPS-N 251 (521)
T ss_pred HHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCC-cEEEEeCCC-C
Confidence 7 7899999999999999999998776 78888888865433 9999999999887766 599999998 9
Q ss_pred CcccCCCHHHHHHHHHHHHhC--CcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 759 PTGLLYSNKEIENILTVCAKY--GARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 759 PTG~v~s~eel~eI~~ia~k~--~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
|||.++|.+++++|+++|+++ +++||+||+|+.+.+ ... +.... .+ +++|+++||||+||+|||
T Consensus 252 PTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~------sl~~~---~~---~~vI~v~SfSK~fg~~G~ 317 (521)
T TIGR03801 252 PPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFR------SLFAE---LP---YNTIGVYSFSKYFGATGW 317 (521)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--ccc------chhhh---CC---CCEEEEEcchhhccCchh
Confidence 999999999999999999986 999999999987765 221 12222 22 489999999999999999
Q ss_pred eeeEEEeCcHHHHHHH------------------------------------HhCCC--CCCCcHHHHH-----HHHHHH
Q 043334 837 KFGFLVLNHPQLVDAF------------------------------------SSFPG--LSKPHSTVRY-----AIKKLL 873 (903)
Q Consensus 837 RiG~lv~~~~~li~~l------------------------------------~~~~~--~~~~s~~~Q~-----aa~~~L 873 (903)
|+||++++++++.+++ +++.. ..+.+++.|. ++.++|
T Consensus 318 RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all 397 (521)
T TIGR03801 318 RLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALM 397 (521)
T ss_pred hhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHh
Confidence 9999999875332222 12222 5677888887 234444
Q ss_pred hcccccchhHHHHHHHHHHHHHHHHHHHhC
Q 043334 874 GLRERKARDLMNAVAEHIRNLESRSKRLKE 903 (903)
Q Consensus 874 ~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~e 903 (903)
++. +.+.+++++.|++|++.+++
T Consensus 398 --~~~-----~~y~~~~~~~~~~R~~~l~~ 420 (521)
T TIGR03801 398 --DKE-----NAYKAETKDICRRREKLLFR 420 (521)
T ss_pred --ccc-----hhHHHHHHHHHHHHHHHHHH
Confidence 222 46888999999999998863
No 70
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2.2e-32 Score=313.89 Aligned_cols=262 Identities=15% Similarity=0.205 Sum_probs=208.2
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---------cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---------QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---------y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
.+.++++|+.|+|++++++.+.+++.+.+.+ |.+..|.+++|+++++++.+. + .+++ +|++|+|+++
T Consensus 31 ~~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~--~~~d-~I~it~Ga~~ 106 (402)
T TIGR03542 31 PSADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-R--IDPE-EIFISDGAKC 106 (402)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-C--CCHH-HEEECCCcHH
Confidence 4678999999999999999888888876542 556679999999999986442 3 4555 9999999999
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCC-----------EEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEE
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKA-----------NIVNIPTESEVGFKMTEKTLVTILETVKKPWVYI 752 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~-----------~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil 752 (903)
++..+ ..++.+||.|++++|+|+.|...++..|+ +++.++++++++|.+|.... .++ +++++
T Consensus 107 al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~~-~~i~l 179 (402)
T TIGR03542 107 DVFRL-QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE-----PKI-DIIYL 179 (402)
T ss_pred HHHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc-----CCc-eEEEE
Confidence 99986 45678999999999999999999999999 99999997666777765321 234 59999
Q ss_pred ECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcc
Q 043334 753 SGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKML 832 (903)
Q Consensus 753 ~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g 832 (903)
++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.+++... ..+..++.. .+++|+++||||.||
T Consensus 180 ~nP~-NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~------~~~~~~~~~---~~~vi~~~SfSK~~g 249 (402)
T TIGR03542 180 CSPN-NPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLP------HSIFEIPGA---KECAIEFRSFSKTAG 249 (402)
T ss_pred eCCC-CCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCC------cchhhCCCC---cccEEEEecCccccC
Confidence 9997 999999999999999999999999999999999888765321 112223322 148999999999999
Q ss_pred cccceeeEEEeCcHHHH--------HHHHhCC-C-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 833 TGALKFGFLVLNHPQLV--------DAFSSFP-G-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 833 ~~GlRiG~lv~~~~~li--------~~l~~~~-~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+||+|+||++++++ ++ +.+.+.. . ..+++.++|.++..++. ++. ..++.+.++.|++|++.+.
T Consensus 250 ~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~--~~~----~~~~~~~~~~~~~~~~~~~ 322 (402)
T TIGR03542 250 FTGVRLGWTVVPKE-LTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYA--GEG----LQPILEAISYYMENARILR 322 (402)
T ss_pred CCCcceEEEEecHH-HhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHc--Ccc----hhHHHHHHHHHHHHHHHHH
Confidence 99999999999987 65 3332222 2 44688899999988884 321 2456677788888888774
No 71
>PLN02397 aspartate transaminase
Probab=100.00 E-value=3.1e-32 Score=314.40 Aligned_cols=297 Identities=13% Similarity=0.060 Sum_probs=209.5
Q ss_pred hccCCCCHHHHHHHHhhhhccCCCCCeEEccCCC-CCCCCcHHHHHHHHHH----HH-----ccCCCCCchHHHHHHHHH
Q 043334 591 MIGFSRSAISVLNSAELSITETPNSGLIHMDVDQ-SFLPIPSLVKAAIFES----FA-----RQNMSESEIDVTPSIQQY 660 (903)
Q Consensus 591 ~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~-p~~~~p~~v~~al~~a----l~-----~y~~~~G~~~lr~ala~~ 660 (903)
+.+.+.+.+..+..... ...++..++++.|. ++...++.+.+++.++ +. +|.+..|.+++|++++++
T Consensus 27 ~~~~~~~~i~~~~~~~~---~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~ 103 (423)
T PLN02397 27 VEPAPPDPILGVTEAFL---ADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKL 103 (423)
T ss_pred CCcCCCChHHHHHHHHh---hCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHH
Confidence 34555556666554322 13566789999996 5654444333333333 21 377788999999999999
Q ss_pred HHhhcCCCCCCCCc-----EEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCH
Q 043334 661 IKSNFGFPIDINAE-----FIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTE 735 (903)
Q Consensus 661 l~~~~G~~~~pe~~-----I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~ 735 (903)
+.+..+....++ + ++.++|+.+++. .+..++.|||+|++++|+|+.|...++..|++++.+|+..+++|.+|+
T Consensus 104 ~~~~~~~~~~~~-~i~~~~i~~g~Ga~~l~~-~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~ 181 (423)
T PLN02397 104 AYGADSPAIKEN-RVATVQCLSGTGSLRLGA-EFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDF 181 (423)
T ss_pred HcCCCCchhhcC-eeEeeecccchHHHHHHH-HHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCH
Confidence 976544332222 3 344555554333 344555799999999999999999999999999999985444688999
Q ss_pred HHHHHHhhc--CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc
Q 043334 736 KTLVTILET--VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS 813 (903)
Q Consensus 736 ~~L~~~l~~--~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~ 813 (903)
+.+++.+.. .+..++++++|| ||||.++|.+++++|+++|+++|++||+||+|.++.|++...+.. + +..+..
T Consensus 182 ~~l~~~l~~~~~~~~~i~~~~P~-NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~---~-~~~~~~ 256 (423)
T PLN02397 182 DGLLEDLKAAPDGSFVLLHACAH-NPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQ---S-VRMFVE 256 (423)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhH---H-HHHHHh
Confidence 988887753 222467777887 999999999999999999999999999999999999865211001 1 222222
Q ss_pred CCCCCCceEEEccCchhcccccceeeEEE--eCcHHHHH----HHHhCCC--CCCCcHHHHHHHHHHHhcccc-cchhHH
Q 043334 814 STNSSFNVSLLGGLSLKMLTGALKFGFLV--LNHPQLVD----AFSSFPG--LSKPHSTVRYAIKKLLGLRER-KARDLM 884 (903)
Q Consensus 814 ~~~~~~~vI~l~S~SK~~g~~GlRiG~lv--~~~~~li~----~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~-~~~~~~ 884 (903)
. .+++|+++||||+|+++|||+||++ +++.++++ .+.++.. ..+++.+.|.++..+|. ++ ..+.+.
T Consensus 257 ~---~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~--~~~~~~~~~ 331 (423)
T PLN02397 257 D---GHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILG--DPELFSEWT 331 (423)
T ss_pred c---CCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhC--CHHHHHHHH
Confidence 2 1479999999999999999999985 44332443 4444443 45678899999999994 32 112233
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 043334 885 NAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 885 ~~l~~~r~~y~~Rr~~l~ 902 (903)
++++.+++.|++||+.++
T Consensus 332 ~~~~~~~~~~~~rr~~l~ 349 (423)
T PLN02397 332 KELKGMADRIISMRQKLY 349 (423)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 457889999999999886
No 72
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-32 Score=309.85 Aligned_cols=260 Identities=14% Similarity=0.185 Sum_probs=213.5
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHH---HccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESF---ARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al---~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.++++|+|+.|+|++.+++.+.+++.+.. ..|....|. ++|+++++++ |++ ++ +|++|+|+++++..++
T Consensus 34 ~~~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g~-~lr~~ia~~~----~~~--~~-~i~~t~G~~~~l~~~~ 105 (371)
T PRK05166 34 GVPRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQGR-ALREAIAART----GVP--AD-RIILGNGSEDLIAVIC 105 (371)
T ss_pred CCcceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHH-HHHHHHHHHh----CcC--HH-HEEEcCCHHHHHHHHH
Confidence 45689999999999988988888887643 236555663 7788877654 654 34 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.+++++||.|+++.|+|+.+...++..|++++.++++. ++.+|++++++.+++++ +++++++|+ ||||.+++.+++
T Consensus 106 ~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~-~~v~l~~p~-NPtG~~~~~~~~ 181 (371)
T PRK05166 106 RAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAP-RMLMFSNPS-NPVGSWLTADQL 181 (371)
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCC-CEEEEeCCC-CCCCCCCCHHHH
Confidence 99999999999999999999999999999999999964 46789999999988766 589999998 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
++|+++|++ +++||+||+|.++.+++... +++..+... .+++|+++||||.||+||+|+||+++++++++
T Consensus 182 ~~l~~~~~~-~~~ii~De~y~~~~~~~~~~------~~~~~~~~~---~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~ 251 (371)
T PRK05166 182 ARVLDATPP-ETLIVVDEAYAEYAAGDDYP------SALTLLKAR---GLPWIVLRTFSKAYGLAGLRVGYGLVSDPELV 251 (371)
T ss_pred HHHHHhCCC-CcEEEEECcHHHhcCCcCcc------cHHHHHhhc---CCCEEEEeechHhhhcchhheeeeecCCHHHH
Confidence 999999875 88999999999888654332 122222221 14799999999999999999999887655598
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+.+.....+++.++|.++..+|. +. .++++.++.|+++|+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~q~~~~~~l~--~~------~~~~~~~~~~~~~r~~l~ 296 (371)
T PRK05166 252 GLLDRVRTPFNVNGAAQAAALAALD--DE------EHLAKGVALALAERERLK 296 (371)
T ss_pred HHHHHhccCCCCCHHHHHHHHHHhc--CH------HHHHHHHHHHHHHHHHHH
Confidence 9988877777889999999988883 22 567778888888888765
No 73
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=5.1e-32 Score=306.10 Aligned_cols=258 Identities=20% Similarity=0.246 Sum_probs=212.4
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHH--ccCCCCCchHHHHHHHHHHHhhcCCC-CCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFA--RQNMSESEIDVTPSIQQYIKSNFGFP-IDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~--~y~~~~G~~~lr~ala~~l~~~~G~~-~~pe~~I~vt~Gs~~al~~l 688 (903)
..++++++|+.|+|+.++++.+.+++.+... .|....|.+++|+++++++++++|++ ++++ +|++|+|+++++..+
T Consensus 18 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~I~it~G~~~~i~~~ 96 (357)
T TIGR03539 18 SHPDGIVDLSVGTPVDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPT-AVLPVIGTKELVAWL 96 (357)
T ss_pred hCCCCeEEccCCCCCCCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcC-eEEEccChHHHHHHH
Confidence 4667899999999988888888888776543 36667899999999999999988987 8877 999999999999998
Q ss_pred HHHh-ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHH
Q 043334 689 VLCC-ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNK 767 (903)
Q Consensus 689 l~~l-~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~e 767 (903)
+..+ +++||.|++++|+|+.|...++..|++++.++. ++.++ ..++ +++++++|+ ||||.++|.+
T Consensus 97 ~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---------~~~l~---~~~~-~~v~~~~p~-NPtG~~~~~~ 162 (357)
T TIGR03539 97 PTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADD---------PTELD---PVGP-DLIWLNSPG-NPTGRVLSVD 162 (357)
T ss_pred HHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccCC---------hhhcC---ccCc-cEEEEeCCC-CCcCccCCHH
Confidence 8887 799999999999999999999999999988741 22222 1234 589999998 9999999999
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhh--hccCCCCCCceEEEccCchhcccccceeeEEEeCc
Q 043334 768 EIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSK--LYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNH 845 (903)
Q Consensus 768 el~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~--l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~ 845 (903)
++++|+++|+++|++||+||+|.++.|++...+ .+.. .+.. .+++|+++||||.|+++|+|+||+++++
T Consensus 163 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~------~~~~~~~~~~---~~~vi~~~S~SK~~~~~G~R~G~~i~~~ 233 (357)
T TIGR03539 163 ELRAIVAWARERGAVVASDECYLELGWEGRPVS------ILDPRVCGGD---HTGLLAVHSLSKRSNLAGYRAGFVAGDP 233 (357)
T ss_pred HHHHHHHHHHHcCeEEEEecchhhhccCCCCcc------ceecccCCCc---cccEEEEeccccccCCCceeEEEEecCH
Confidence 999999999999999999999998888654321 1110 0111 1489999999999999999999999987
Q ss_pred HHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 846 PQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 846 ~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+ +++.+.++.. ..+++++.|.++..+|. + ..++..+++.|++|++.++
T Consensus 234 ~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~------~~~~~~~~~~~~~~~~~~~ 283 (357)
T TIGR03539 234 A-LVAELLTVRKHAGLMVPAPVQAAMVAALG--D------DGHVAEQKARYAARRAQLK 283 (357)
T ss_pred H-HHHHHHHHHhhcccCCCHHHHHHHHHHcC--C------HHHHHHHHHHHHHHHHHHH
Confidence 7 9998887653 56789999999999983 2 2567788889999988775
No 74
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.8e-32 Score=306.18 Aligned_cols=257 Identities=16% Similarity=0.201 Sum_probs=209.4
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+.++++|+.|+|++++|+.+++++.+.+.. |. ..+.+++|+++++++ |++ ++ +|++|+|+++++..++
T Consensus 18 ~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~-~~~~~~lr~~ia~~~----~~~--~~-~i~it~Ga~~~l~~~~ 89 (356)
T PRK08056 18 SPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYP-DVEYRHLHQALARHH----QVP--AS-WILAGNGETESIFAVV 89 (356)
T ss_pred ChhhEEEeccccCCCCCCHHHHHHHHHHHHhcccCc-CccHHHHHHHHHHHh----CcC--hh-hEEECCCHHHHHHHHH
Confidence 4567999999999999999999998876543 32 345677888887764 554 44 8999999999999988
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.++ .+|+ +++++|+|..|...++..|++++.+|++++++|.+|. ++.+.+.+++ +++++++|+ ||||.+++.+++
T Consensus 90 ~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~~~~~~~~~~-k~v~l~~p~-NPTG~~~~~~~~ 164 (356)
T PRK08056 90 SGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTD-AILEALTPDL-DCLFLCTPN-NPTGLLPERQLL 164 (356)
T ss_pred HHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccH-HHHHhccCCC-CEEEEeCCc-CCCCCCCCHHHH
Confidence 876 6776 7778999999999999999999999998767888884 4445566555 589999998 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
++|+++|++++++||+||+|.++.+++... ...+... +++++++||||.||++|+|+||++++++.++
T Consensus 165 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~--------~~~~~~~----~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~ 232 (356)
T PRK08056 165 QAIAERCKSLNIALILDEAFIDFIPDETGF--------IPQLADN----PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAV 232 (356)
T ss_pred HHHHHHHHhcCCEEEEecchhccCCcchHH--------HHHhccC----CCEEEEEechhhccCcchhheeeecCCHHHH
Confidence 999999999999999999998887755321 1112222 4899999999999999999999999754488
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+.+.....+++.+.|.++..+|+ +. .+..++++.|++||+.+.
T Consensus 233 ~~l~~~~~~~~~~~~~~~~a~~~l~--~~------~~~~~~~~~~~~~r~~l~ 277 (356)
T PRK08056 233 ARMRRQQMPWSINAFAALAGEVILQ--DR------AYQQATWQWLAEEGARFY 277 (356)
T ss_pred HHHHHhCCCCchhHHHHHHHHHHhC--CH------HHHHHHHHHHHHHHHHHH
Confidence 8888776677788899999998883 22 567788888888888764
No 75
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-32 Score=307.29 Aligned_cols=257 Identities=14% Similarity=0.171 Sum_probs=214.0
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHc--cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFAR--QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~--y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
..++++|+.|+|++++++.+.+++.+.+.. |.+..|.+++|+++++++ +++ ++ +|++|+|+++++..++.+
T Consensus 28 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~~g~~~lr~~ia~~~----~~~--~~-~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 28 LEKIVKLASNENPYGPSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHL----GVD--EE-QLLFGAGLDEVIQMISRA 100 (359)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHh----CCC--HH-HEEECCCHHHHHHHHHHH
Confidence 347899999999998888899988877543 455678888999888876 443 34 899999999999999999
Q ss_pred hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHH
Q 043334 692 CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIEN 771 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~e 771 (903)
++++||.|++++|+|+.|...+...|++++.+|++ ++.+|++.+++.+++++ +++++++|+ ||||.+++.+++.+
T Consensus 101 ~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~-~~v~i~~p~-NPtG~~~~~~~l~~ 175 (359)
T PRK03158 101 LLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQT-KIVWICNPN-NPTGTYVNHEELLS 175 (359)
T ss_pred HhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCC-CEEEEeCCC-CCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999996 35589999998887766 589999997 99999999999999
Q ss_pred HHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH
Q 043334 772 ILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 772 I~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~ 851 (903)
+++.|+ +|++||+||+|.++.|++... +.+..++.. +++|+++||||.||+||+|+||++++++ ++++
T Consensus 176 ~~~~~~-~~~~ii~De~y~~~~~~~~~~------~~~~~~~~~----~~vi~~~S~SK~~g~~GlRiG~~v~~~~-~~~~ 243 (359)
T PRK03158 176 FLESVP-SHVLVVLDEAYYEYVTAEDYP------DTLPLLEKY----ENLIVLRTFSKAYGLAALRVGYGIASEE-LIEK 243 (359)
T ss_pred HHHhCC-CCcEEEEECchHhhcCCcccc------cHHHHHHhc----CCEEEEEechHhhcCcchhhehhcCCHH-HHHH
Confidence 998874 699999999999888765331 112223332 4899999999999999999999999987 9999
Q ss_pred HHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 852 FSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 852 l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+....++++.++|.++..+|+ ++ ++++..++.++++++.+.
T Consensus 244 ~~~~~~~~~~~~~~q~~~~~~l~--~~------~~~~~~~~~~~~~~~~~~ 286 (359)
T PRK03158 244 LNIARPPFNTTRIAQYAAIAALE--DQ------AFLKECVEKNAEGLEQYY 286 (359)
T ss_pred HHHhcCCCCCCHHHHHHHHHHhc--CH------HHHHHHHHHHHHHHHHHH
Confidence 98887777899999999999994 32 466666777777776653
No 76
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-32 Score=309.16 Aligned_cols=253 Identities=15% Similarity=0.201 Sum_probs=208.9
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHH-ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFA-RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~-~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
.+.++|+|+.|+|++++|+.+++++..... .+.+..+.+++|+++++++ |++ ++ +|++|+|+++++..++.+
T Consensus 50 ~~~~~i~l~~n~~p~~~~~~v~~a~~~~~~~~~Yp~~~~~~lr~~ia~~~----~~~--~~-~I~~t~Ga~~~i~~~~~~ 122 (380)
T PLN03026 50 KPEDIVKLDANENPYGPPPEVLEALGNMKFPYVYPDPESRRLRAALAEDS----GLE--SE-NILVGCGADELIDLLMRC 122 (380)
T ss_pred CccceEEccCCCCCCCCCHHHHHHHHhhHhhccCCCCCHHHHHHHHHHHh----CcC--hh-hEEEcCCHHHHHHHHHHH
Confidence 456899999999999999989888865321 2223346677777777765 554 44 899999999999999999
Q ss_pred hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh-hcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 692 CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL-ETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l-~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++++||+|++++|+|+.|...++..|++++.++++ ++|.+|++.+++.+ ++++ +++++++|| ||||.+++.++++
T Consensus 123 ~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~-~~v~l~~P~-NPTG~~~~~~~l~ 198 (380)
T PLN03026 123 VLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKP-KLLFLTSPN-NPDGSIISDDDLL 198 (380)
T ss_pred hcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCC-cEEEEeCCC-CCCCCCCCHHHHH
Confidence 99999999999999999999999999999999985 35789999999988 4555 699999998 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
+|++.+ ++||+||+|.++.+++.. ...+... +++|+++||||.||++|||+||++++++ +++
T Consensus 199 ~l~~~~----~~vi~DeaY~~~~~~~~~---------~~~~~~~----~~viv~~SfSK~~glaGlRiGy~~~~~~-~i~ 260 (380)
T PLN03026 199 KILELP----ILVVLDEAYIEFSTQESR---------MKWVKKY----DNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIE 260 (380)
T ss_pred HHHhcC----CEEEEECcchhhcCCcch---------HHHHHhC----CCEEEEecchHhhcCccccceeeecCHH-HHH
Confidence 988753 899999999877664321 1222222 4899999999999999999999999987 999
Q ss_pred HHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 851 AFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+.+....++++.++|.++..+|. +. ++++++++.|+++|+.+.
T Consensus 261 ~l~~~~~~~~~~~~~q~aa~~aL~--~~------~~~~~~~~~~~~~r~~l~ 304 (380)
T PLN03026 261 YLWRAKQPYNVSVAAEVAACAALS--NP------KYLEDVKNALVEERERLF 304 (380)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHhh--CH------HHHHHHHHHHHHHHHHHH
Confidence 999888777889999999999994 22 567888888999888775
No 77
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-32 Score=306.01 Aligned_cols=253 Identities=15% Similarity=0.176 Sum_probs=209.4
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
...++|+.|+|++++|+.+.+++.+.... |... +.+++|+++++++ |++ ++ +|++|+|+++++..++.+
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~-~~~~Lr~~ia~~~----~~~--~~-~I~it~G~~~~l~~~~~~ 103 (369)
T PRK08153 32 PFRARIGANESGFGPSPSVIAAMREAAAEIWKYGDP-ENHDLRHALAAHH----GVA--PE-NIMVGEGIDGLLGLIVRL 103 (369)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCC-ccHHHHHHHHHHh----CCC--HH-HEEEcCCHHHHHHHHHHH
Confidence 34579999999999999999998877543 4433 4678888888765 554 44 899999999999999999
Q ss_pred hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHH
Q 043334 692 CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIEN 771 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~e 771 (903)
+++|||.|++++|+|+.+...++..|++++.+|++.+ .+|++.+.+.+.....+++++++|+ ||||.++|.+++.+
T Consensus 104 ~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~-NPtG~~~~~~~l~~ 179 (369)
T PRK08153 104 YVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPD-NPMGSWHPAADIVA 179 (369)
T ss_pred hcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCC-CCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999998542 3789998877653333589999997 99999999999999
Q ss_pred HHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH
Q 043334 772 ILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 772 I~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~ 851 (903)
|++.|++ +++||+||+|.++.+++... + +.. .. +++|+++||||+||+||+|+||++++++ +++.
T Consensus 180 l~~~~~~-~~~lI~DE~y~~~~~~~~~~------~-~~~--~~----~~~i~~~SfSK~~g~~GlRiG~~v~~~~-~~~~ 244 (369)
T PRK08153 180 FIEALPE-TTLLVLDEAYCETAPAGAAP------P-IDT--DD----PNVIRMRTFSKAYGLAGARVGYAIGAPG-TIKA 244 (369)
T ss_pred HHHhCCC-CcEEEEeCchhhhcCcccch------h-hhh--cC----CCEEEEecchHhccCcchheeeeecCHH-HHHH
Confidence 9999874 99999999999887755321 1 111 11 4799999999999999999999999887 9999
Q ss_pred HHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 852 FSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 852 l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+....++++.+.|.++..+|. ++ ++++++++.++++|+.+.
T Consensus 245 l~~~~~~~~~s~~~q~~~~~~l~--~~------~~~~~~~~~~~~~r~~~~ 287 (369)
T PRK08153 245 FDKVRNHFGMNRIAQAAALAALK--DQ------AYLAEVVGKIAAARDRIA 287 (369)
T ss_pred HHHhhcCCCCCHHHHHHHHHHhc--CH------HHHHHHHHHHHHHHHHHH
Confidence 98887778899999999999994 32 567778888888888764
No 78
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=3.3e-32 Score=307.54 Aligned_cols=272 Identities=22% Similarity=0.344 Sum_probs=226.7
Q ss_pred CeEEccCCCCCCC----CcHHHHHHHHH-HHH-----ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 616 GLIHMDVDQSFLP----IPSLVKAAIFE-SFA-----RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 616 ~~IdLs~g~p~~~----~p~~v~~al~~-al~-----~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
++|+|+.|+++.. +++.+.+++.+ ... .|.+..|.+++|+++++++.+..|++.+++.+|++++|+++++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 6899999999987 55666666554 211 3677788999999999999988898888766899999999999
Q ss_pred HHHHHHh-ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC-----CCcEEEEECCCCCC
Q 043334 686 NKLVLCC-ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV-----KKPWVYISGPTINP 759 (903)
Q Consensus 686 ~~ll~~l-~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-----~~~~vil~~P~~NP 759 (903)
..+...+ .++||.|++++|+|+.|...++..|+++++++++.+++|.+|+++|++.+++. +++++++++|+ ||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~-nP 160 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPN-NP 160 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSB-TT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccc-cc
Confidence 9999888 78999999999999999999999999999999887778999999999998872 23599999998 99
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
||.+++.+++++|+++|+++|++||+||+|+++.++.... . +....++.. .++|+++||||+||++|+|+|
T Consensus 161 tG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~--~---~~~~~~~~~----~~vi~~~S~SK~~g~~GlRvG 231 (363)
T PF00155_consen 161 TGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDF--G---PIRSLLDED----DNVIVVGSLSKSFGLPGLRVG 231 (363)
T ss_dssp TTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHT--H---HHHGHHTTT----STEEEEEESTTTTTSGGGTEE
T ss_pred cccccccccccchhhhhcccccceeeeeceeccccCCCcc--C---ccccccccc----ccceeeeeccccccccccccc
Confidence 9999999999999999999999999999999998876531 1 112333332 369999999999999999999
Q ss_pred EEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 840 FLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 840 ~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|+++++. +++.+.+.......+++.|.++..++. +. ....++++++++.|++|++.+.
T Consensus 232 ~i~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~--~~~~~~~~~~~~~l~~~~~~l~ 289 (363)
T PF00155_consen 232 YIVAPPE-LIERLRRFQRSGLSSSPMQAAAAAALS--DP--ELVEKWLEELRERLRENRDLLR 289 (363)
T ss_dssp EEEEEHH-HHHHHHHHHHHTTSSHHHHHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhh-hhhhhhhccccccccchhhHHHHHhhh--cc--cccccccccchhhHHHHHHHHH
Confidence 9999766 999999877644448999999999994 22 2234589999999999998875
No 79
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2.2e-31 Score=301.21 Aligned_cols=256 Identities=17% Similarity=0.169 Sum_probs=201.8
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
....++|+|+.|+|++++|+.+.+++.+.+.. |.. .+.+++|+++++++ +++ ++ +|++|+|+++++..+
T Consensus 19 ~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~-~~~~~Lr~aia~~~----~v~--~~-~I~it~G~~~~i~~~ 90 (360)
T PRK07392 19 CPPDAILDFSASINPLGPPESVIAAIQSALSALRHYPD-PDYRELRLALAQHH----QLP--PE-WILPGNGAAELLTWA 90 (360)
T ss_pred CCcccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCC-cCHHHHHHHHHHHh----CcC--hh-hEEECCCHHHHHHHH
Confidence 34457899999999999999999988776543 443 34578888888876 554 44 999999999999999
Q ss_pred HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCc---ccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCC
Q 043334 689 VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGF---KMTEKTLVTILETVKKPWVYISGPTINPTGLLYS 765 (903)
Q Consensus 689 l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f---~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s 765 (903)
+.++. +||.|++++|+|+.|...++..|++++.++++.++++ ..+++.+++... ++ ++++++||| ||||.+++
T Consensus 91 ~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~l~nP~-NPTG~~~~ 166 (360)
T PRK07392 91 GRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLT-PN-DGLLLNNPH-NPTGKLWS 166 (360)
T ss_pred HHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhcc-CC-CEEEEeCCC-CCCCCCcC
Confidence 88864 7899999999999999999999999999999865554 356777765532 33 599999997 99999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCc
Q 043334 766 NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNH 845 (903)
Q Consensus 766 ~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~ 845 (903)
.+++.+ +++++++ +|+||+|.++.+++... +....++.. +++|+++||||+||+||+|+||+++++
T Consensus 167 ~~~l~~---l~~~~~~-~IiDE~y~~~~~~~~~~------s~~~~~~~~----~~vi~i~S~SK~~~l~GlRiG~~v~~~ 232 (360)
T PRK07392 167 REAILP---LLEQFAL-VVVDEAFMDFLPPDAEQ------SLIPCLAEY----PNLIILRSLTKFYSLPGLRLGYAIAHP 232 (360)
T ss_pred HHHHHH---HHHHCCE-EEEECchhhhccCcccc------chHHHhhcC----CCEEEEEechhhhcCCchheeeeeCCH
Confidence 766555 4567775 56699999888766432 122223322 489999999999999999999999998
Q ss_pred HHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 846 PQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 846 ~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+ +++.+.+.....+++.++|.++..+|+ ++ .+.+.+++.++++|+.+.
T Consensus 233 ~-~~~~~~~~~~~~~~s~~~q~~~~~~l~--~~------~~~~~~~~~~~~~r~~l~ 280 (360)
T PRK07392 233 D-RLQRWQQWRDPWPVNGLAAAAAIAALA--DR------DFQQQTWAWLPPAREALF 280 (360)
T ss_pred H-HHHHHHhhCCCCCCCHHHHHHHHHHhc--cH------HHHHHHHHHHHHHHHHHH
Confidence 7 889988777677899999999999994 33 455566667788877764
No 80
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-31 Score=299.57 Aligned_cols=253 Identities=23% Similarity=0.364 Sum_probs=211.5
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
.+++++|+.++|++++|+.+++++.+.+. .|.. ....++++++++++ |. .+++ +|++++|++++|..+++
T Consensus 21 ~~~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd-~~~~~l~~a~a~~~----~~-~~~~-~V~~gnGsde~i~~l~~ 93 (356)
T COG0079 21 LPGIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPD-PDYRELRAALAEYY----GV-VDPE-NVLVGNGSDELIELLVR 93 (356)
T ss_pred CccceeecCCCCCCCCCHHHHHHHHHHHHhhccCCC-CcHHHHHHHHHHHh----CC-CCcc-eEEEcCChHHHHHHHHH
Confidence 33699999999999999999998888764 3433 35666777766654 52 2333 89999999999999999
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
+++.|||+|+++.|+|..|...++..|++++.++..+ |.+|++.+.+.+.+++ ++|++|||| ||||..++.++++
T Consensus 94 ~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~-~lv~i~nPN-NPTG~~~~~~~l~ 168 (356)
T COG0079 94 AFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKT-KLVFLCNPN-NPTGTLLPREELR 168 (356)
T ss_pred HhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCC-CEEEEeCCC-CCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999964 8899999999998855 699999999 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
++++.+.+ +.+||+||+| ++|.++. ....+. .+ .++++++||||.||++|+|+||++++++ +++
T Consensus 169 ~l~~~~~~-~~~vVvDEAY--~eF~~~~--------~~~l~~-~~---~nlivlRTfSKa~gLAGlRlGy~ia~~~-~i~ 232 (356)
T COG0079 169 ALLEALPE-GGLVVIDEAY--IEFSPES--------SLELLK-YP---PNLIVLRTFSKAFGLAGLRVGYAIANPE-LIA 232 (356)
T ss_pred HHHHhCCC-CcEEEEeCch--hhcCCch--------hhhhcc-CC---CCEEEEEecHHhhhcchhceeeccCCHH-HHH
Confidence 99999988 9999999999 5665532 233333 22 4799999999999999999999999888 999
Q ss_pred HHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 851 AFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+.++...++.+.++|.++.++|. +. +++++.++..+..|+++.
T Consensus 233 ~l~~vr~p~~v~~~a~~aa~aal~--~~------~~~~~~~~~~~~~r~rl~ 276 (356)
T COG0079 233 ALNKVRPPFNVSSPALAAAIAALR--DA------DYLEESVERIREERERLY 276 (356)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHcc--cH------HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999995 21 455555555555555543
No 81
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.6e-31 Score=303.47 Aligned_cols=251 Identities=16% Similarity=0.174 Sum_probs=205.5
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
++.++|+.|+|++++|+.+.+++.+.+.. |... +.+++|+++++ ++|++ ++ +|++|+|+++++..++.+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~-~~~~Lr~aia~----~~~v~--~e-~I~it~Gs~~ai~~~~~~ 114 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALSGRYDLE-LEDDLRTLFAA----QEGLP--AD-HVMAYAGSSEPLNYAVLA 114 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCc-hHHHHHHHHHH----HhCcC--hh-hEEEcCChHHHHHHHHHH
Confidence 57899999999999999999999887643 3322 35677777665 45764 44 899999999999999999
Q ss_pred hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHH
Q 043334 692 CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIEN 771 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~e 771 (903)
++++||+|++++|+|+.|...++..|++++.++++. +|.+|++.+++. .+++ ++++++||| ||||.+++.+++++
T Consensus 115 l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~-~~v~l~nP~-NPTG~~~~~~~l~~ 189 (370)
T PRK09105 115 FTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNA-GLIYICNPN-NPTGTVTPRADIEW 189 (370)
T ss_pred HcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCC-CEEEEeCCC-CCCCcCcCHHHHHH
Confidence 999999999999999999999999999999999864 577999999876 3444 589999998 99999999999999
Q ss_pred HHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH
Q 043334 772 ILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 772 I~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~ 851 (903)
|++.|+ ++++||+||+|.++. +.. + .....+. .+++++++||||.||++|||+||++++++ +++.
T Consensus 190 l~~~~~-~~~~lIvDEaY~~f~--~~~----s---~~~~~~~----~~~vi~~~SfSK~~g~~GlRiG~~v~~~~-~i~~ 254 (370)
T PRK09105 190 LLANKP-AGSVLLVDEAYIHFS--DAP----S---VVDLVAQ----RKDLIVLRTFSKLYGMAGMRLGLAAARPD-LLAK 254 (370)
T ss_pred HHHhCC-CCcEEEEECchHHhc--cCc----c---hHHHHhh----CCCEEEEecccHhhcCCccceeeeecCHH-HHHH
Confidence 999764 599999999996543 221 1 1221122 14899999999999999999999999887 9999
Q ss_pred HHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 852 FSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 852 l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+... ....++.+.|.++..+|. + .+|+++.++.|+++|+.+.
T Consensus 255 l~~~-~~~~~~~~~~~aa~~~L~--~------~~~~~~~~~~~~~~r~~l~ 296 (370)
T PRK09105 255 LARF-GHNPLPVPAAAAGLASLR--D------PKLVPQRRAENAAVREDTI 296 (370)
T ss_pred HHhc-CCCCcCHHHHHHHHHHHh--C------HHHHHHHHHHHHHHHHHHH
Confidence 8877 555588889999999994 2 2578888888988888775
No 82
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.98 E-value=1.3e-30 Score=298.47 Aligned_cols=245 Identities=16% Similarity=0.207 Sum_probs=207.0
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHH-------ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFA-------RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~-------~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
...++++|+.|.|++++++.+.+++.+.+. .|....|.+++|+++++++.+.++...+|+ +|++|+|+++++
T Consensus 31 ~~~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~G~~~al 109 (394)
T PRK06836 31 GADNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTAD-HIVMTCGAAGAL 109 (394)
T ss_pred CCCCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcC-cEEEeCChHHHH
Confidence 346789999999988888889998877654 255668999999999999998888887777 999999999999
Q ss_pred HHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCC
Q 043334 686 NKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYS 765 (903)
Q Consensus 686 ~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s 765 (903)
..++..++++||.|++++|+|..|...++..|++++.+++++ ++|.+|++++++.+++++ +++++++|+ ||||.+++
T Consensus 110 ~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~~~~~~-~~v~~~~p~-NPtG~~~~ 186 (394)
T PRK06836 110 NVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDT-DTFQPDLDALEAAITPKT-KAVIINSPN-NPTGVVYS 186 (394)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCC-ccCcCCHHHHHhhcCcCc-eEEEEeCCC-CCCCcCCC
Confidence 999999999999999999999999999999999999999975 357899999999998766 589999998 99999999
Q ss_pred HHHHHHHHHHHHh------CCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 766 NKEIENILTVCAK------YGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 766 ~eel~eI~~ia~k------~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
.+++++|+++|++ ||++||+||+|.++.|++... . +... .. +++++++||||.||+||+|+|
T Consensus 187 ~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~--~---~~~~---~~----~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 187 EETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEV--P---YIFK---YY----DNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred HHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCC--C---ChHH---cc----CcEEEEecchhhccCcceeeE
Confidence 9999999999999 899999999999998876432 1 1111 11 489999999999999999999
Q ss_pred EEEeCcHHHHH------HHHhCCC---CCCCcHHHHHHHHHHHh
Q 043334 840 FLVLNHPQLVD------AFSSFPG---LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 840 ~lv~~~~~li~------~l~~~~~---~~~~s~~~Q~aa~~~L~ 874 (903)
|+++++. +.+ .+..... ..+++.+.|.++..++.
T Consensus 255 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 297 (394)
T PRK06836 255 YIAVNPE-MEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD 297 (394)
T ss_pred EEecCHH-HhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC
Confidence 9999876 432 2222221 34678889999999984
No 83
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=5.2e-31 Score=297.62 Aligned_cols=253 Identities=18% Similarity=0.343 Sum_probs=208.1
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
.+.++|+|+.|+|++++|+.+++++.+++.. |. ..|.+++|+++++++ |.+.. + +|++|+|+++++..
T Consensus 24 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~~~~lr~~ia~~~----~~~~~-~-~I~~t~G~~~~i~~ 96 (356)
T PRK04870 24 DATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYP-DPRAAALKAALRAAM----GVPAG-A-DVLLGNGSDELIQL 96 (356)
T ss_pred CCCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCC-CCCHHHHHHHHHHHh----CcCCC-C-cEEEcCCHHHHHHH
Confidence 3457999999999999999999999987643 33 356777888887766 44321 2 79999999999999
Q ss_pred HHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHH
Q 043334 688 LVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNK 767 (903)
Q Consensus 688 ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~e 767 (903)
++.+++++||+|++++|+|+.|...++..|++++.+|+++ +|.+|++.+++.+.+.+.+++++++|+ ||||.+++.+
T Consensus 97 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~~~~~~~~~v~l~~p~-NPtG~~~~~~ 173 (356)
T PRK04870 97 LALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTA--DFTLDLPAMLAAIAEHRPALVFLAYPN-NPTGNLFDDA 173 (356)
T ss_pred HHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCCEEEEcCCC-CCCCCCCCHH
Confidence 9999999999999999999999999999999999999963 578999999999875444699999997 9999999999
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHH
Q 043334 768 EIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQ 847 (903)
Q Consensus 768 el~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~ 847 (903)
++++|+++| ++++|+||+|.++.++ .. ...+... +++++++|||| +++||+|+||++++++
T Consensus 174 ~~~~i~~~~---~~~ii~De~y~~~~~~--~~--------~~~~~~~----~~vi~~~S~SK-~~~~GlRiG~~i~~~~- 234 (356)
T PRK04870 174 DVERIIEAA---PGLVVVDEAYQPFAGD--SW--------LPRLARF----PNLLVMRTVSK-LGLAGLRLGYLAGHPA- 234 (356)
T ss_pred HHHHHHHHC---CCEEEEECCchhhcCc--ch--------HHHHhhC----CCEEEEecchh-hhhHHHhhhhhhCCHH-
Confidence 999999998 6789999999766532 11 1112222 48999999999 8999999999999987
Q ss_pred HHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 848 LVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 848 li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.+.+....++++.++|.++..+++ +. +++++.++.++++++.+.
T Consensus 235 ~i~~~~~~~~~~~~~~~~q~~a~~~l~--~~------~~~~~~~~~~~~~~~~l~ 281 (356)
T PRK04870 235 WIAELDKVRPPYNVNVLTQATALFALE--HV------DVLDAQAAQLRAERTRLA 281 (356)
T ss_pred HHHHHHHccCCCcCCHHHHHHHHHHHh--CH------HHHHHHHHHHHHHHHHHH
Confidence 999998877667788999999888883 22 345667777777777664
No 84
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.98 E-value=6.6e-31 Score=303.05 Aligned_cols=265 Identities=14% Similarity=0.111 Sum_probs=203.4
Q ss_pred CCCeEEccCCCCCCCC-c-HHHHHHHHHHHH---------ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH
Q 043334 614 NSGLIHMDVDQSFLPI-P-SLVKAAIFESFA---------RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ 682 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~-p-~~v~~al~~al~---------~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~ 682 (903)
.+++|+|+.|.|+..+ + ..+.+++.+.+. .|....|.+++|+++++++++.+|+..+++ +|++|+|++
T Consensus 29 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~-~I~it~Ga~ 107 (416)
T PRK09440 29 TPGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQ-NIALTNGSQ 107 (416)
T ss_pred CCCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEEccChH
Confidence 3678999999987543 2 345566555442 366678999999999999999899988887 999999999
Q ss_pred HHHHHHHHHhcc-----CCCeEEE-cCCCcHHHHHHHHHcC----CEEEEecCCCCC-CcccCHHHHHHHhhcCCCcEEE
Q 043334 683 SLFNKLVLCCIL-----EGGTLCF-PAGSNGNYVSAARFLK----ANIVNIPTESEV-GFKMTEKTLVTILETVKKPWVY 751 (903)
Q Consensus 683 ~al~~ll~~l~~-----pGD~Vlv-~~P~y~~~~~~~~~~G----~~vv~v~~~~~~-~f~ld~~~L~~~l~~~~~~~vi 751 (903)
+++..++.++++ +||.|++ ++|+|+.|...+...| ..+..++++.++ +|.+|++.++ +.+++ ++++
T Consensus 108 ~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~-~~i~ 184 (416)
T PRK09440 108 SAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDT-GAIC 184 (416)
T ss_pred HHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCc-eEEE
Confidence 999999999985 6899999 7999999998765444 222223333221 4779999997 34444 6999
Q ss_pred EECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 752 ISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 752 l~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
+++|| ||||.++|.+++++|+++|+++|++||+||+|..+.. ... .....+.. .+++|+++||||+
T Consensus 185 l~~P~-NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~-~~~--------~~~~~~~~---~~~vI~~~SfSK~- 250 (416)
T PRK09440 185 VSRPT-NPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFP-GII--------FSEATPLW---NPNIILCMSLSKL- 250 (416)
T ss_pred EecCC-CCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCC-Ccc--------hhhcCccc---cCCeEEEeccccc-
Confidence 99998 9999999999999999999999999999999964321 100 00000111 1589999999996
Q ss_pred ccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHH-HHHHHHHHHHHHh
Q 043334 832 LTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAE-HIRNLESRSKRLK 902 (903)
Q Consensus 832 g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~-~r~~y~~Rr~~l~ 902 (903)
++||+|+||++++++ +++++..... ..+++.+.|.++..+|. ++ .+..++.+ +++.|++|++.+.
T Consensus 251 ~~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~~s~~~q~~~~~~l~--~~---~~~~~~~~~~~~~~~~r~~~~~ 318 (416)
T PRK09440 251 GLPGVRCGIVIADEE-IIEALSNMNGIISLAPGRLGPAIAAEMIE--SG---DLLRLSETVIRPFYRQKVQLAI 318 (416)
T ss_pred CCCcceEEEEeCCHH-HHHHHHHHHHHhccCCCcHHHHHHHHHhc--cc---hHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999887 9999988765 56789999999999994 44 24455544 6888888888764
No 85
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=1e-30 Score=294.73 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=201.7
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHH----ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFA----RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~----~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
..++|+|+.|+|++++++.+.+++.+.+. .|. ..|.+++|+++++++ ++ +++ +|++|+|+++++..++
T Consensus 23 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~-~~~~~~lr~aia~~~----~~--~~~-~I~it~G~~~al~~~~ 94 (353)
T PRK05387 23 LAKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYP-DPNADALRQAIAAYY----GL--DPE-QVFVGNGSDEVLAHAF 94 (353)
T ss_pred ccceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCC-CCcHHHHHHHHHHHh----CC--CHH-HEEEcCCHHHHHHHHH
Confidence 35789999999999988888888877653 243 346688888888876 44 344 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.++++|||.|++++|+|+.|...++..|++++.+++++ +|.+|++++++ .+ +++++++|+ ||||.++|.+++
T Consensus 95 ~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~----~~-~~v~~~~P~-NPtG~~~~~~~~ 166 (353)
T PRK05387 95 LAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDD--DFSIDVEDYLR----PN-GGIIFPNPN-APTGIALPLAEI 166 (353)
T ss_pred HHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHh----cC-CEEEEeCCC-CCCCCCCCHHHH
Confidence 99999999999999999999999999999999999863 57799998864 23 589999997 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
++|++.++ +++||+||+|.+ |.+... .+. .... +++++++||||.||+||+|+||++++++ ++
T Consensus 167 ~~l~~~~~--~~~livDe~y~~--~~~~~~-----~~~---~~~~----~~~i~~~S~SK~~~~~GlR~G~~~~~~~-~~ 229 (353)
T PRK05387 167 ERILAANP--DSVVVIDEAYVD--FGGESA-----IPL---IDRY----PNLLVVQTFSKSRSLAGLRVGFAIGHPE-LI 229 (353)
T ss_pred HHHHHhCC--CcEEEEeCcccc--cCCcch-----HHH---HhhC----CCEEEEEehhHhhcchhhhceeeecCHH-HH
Confidence 99998653 899999999964 443321 111 1222 4799999999999999999999999877 99
Q ss_pred HHHHhCCC---CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPG---LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~---~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.+... ..+++.+.|.++..+|. +. ++.++.++.+++|++.+.
T Consensus 230 ~~l~~~~~~~~~~~~~~~~q~~~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 277 (353)
T PRK05387 230 EALNRVKNSFNSYPLDRLAQAGAIAAIE--DE------AYFEETRAKVIATRERLV 277 (353)
T ss_pred HHHHHhhccCCCCCcCHHHHHHHHHHhc--CH------HHHHHHHHHHHHHHHHHH
Confidence 99887764 35678999999999993 22 456677778888887764
No 86
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.7e-30 Score=291.16 Aligned_cols=246 Identities=19% Similarity=0.305 Sum_probs=196.0
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
.+.+.|+|+.|+|++++|+.+++++.+++.. +++..|.+++|+++++++.+. ++ +++ +|++|+|+++++..+
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~-~~--~~~-~i~it~Ga~~~i~~~ 92 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTD-FL--SKN-NVSVGNGADEIIYVM 92 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCC-CC--Ccc-eEEEcCCHHHHHHHH
Confidence 5568999999999999999999998876532 123458899999999999764 33 444 999999999999999
Q ss_pred HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHH
Q 043334 689 VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 689 l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
+.++ |.|++++|+|+.|...++..|++++.+|+++ +|.++... +. .+ ++++++||| ||||.++|.++
T Consensus 93 ~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~~-~~-~~i~i~nP~-NPTG~~~s~~~ 159 (335)
T PRK14808 93 MLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----VG-EG-DVVFIPNPN-NPTGHVFEREE 159 (335)
T ss_pred HHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----cc-CC-CEEEEeCCC-CCCCCCcCHHH
Confidence 8877 6799999999999999999999999999974 35455332 22 33 599999998 99999999999
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
+++|+ +++++||+||+|.++. +... . +.+ ... +++|+++||||+||++|+|+||++++++ +
T Consensus 160 l~~l~----~~~~~ii~DE~Y~~f~--~~~~--~---~~~---~~~----~~vi~~~S~SK~~~l~GlRvG~~v~~~~-~ 220 (335)
T PRK14808 160 IERIL----KTGAFVALDEAYYEFH--GESY--V---DLL---KKY----ENLAVIRTFSKAFSLAAQRIGYVVSSEK-F 220 (335)
T ss_pred HHHHH----hcCCEEEEECchhhhc--CCch--H---HHH---HhC----CCEEEEEechhhccCcccceEEEEeCHH-H
Confidence 98886 4799999999997753 2221 1 112 222 4899999999999999999999999987 9
Q ss_pred HHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 849 VDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 849 i~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++.+.+..++++.++|.++..++. +. ++..+.++.++++|+.+.
T Consensus 221 ~~~l~~~~~~~~~~~~~q~a~~~~l~--~~------~~~~~~~~~~~~~r~~l~ 266 (335)
T PRK14808 221 IDAYNRVRLPFNVSYVSQMFAKVALD--HR------EIFEERTKFIVEERERMK 266 (335)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHh--CH------HHHHHHHHHHHHHHHHHH
Confidence 99998887777889999999988884 22 345555566666666653
No 87
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=3.3e-30 Score=290.70 Aligned_cols=250 Identities=17% Similarity=0.263 Sum_probs=199.2
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
+..++|+.|+|++++|+.+.+++.+.+.. |. ..+..++|+++++++ +++ ++ +|++|+|+++++..++
T Consensus 22 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~-~~~~~~lr~~ia~~~----~~~--~~-~i~it~G~~~~l~~~~ 93 (351)
T PRK14807 22 PYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYP-DPTAEKLREELARYC----SVV--PT-NIFVGNGSDEIIHLIM 93 (351)
T ss_pred CceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCC-CccHHHHHHHHHHHh----CCC--cc-cEEEecCHHHHHHHHH
Confidence 45799999999999999999998886643 22 234566777777764 554 34 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.++++|||+|++++|+|+.|...++..|++++.+++++ +|.+|++.+++.+++...+++++++|+ ||||.+++.+++
T Consensus 94 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~k~v~l~~p~-NPtG~~~~~~~l 170 (351)
T PRK14807 94 LAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKE--DYTYDVGSFIKVIEKYQPKLVFLCNPN-NPTGSVIEREDI 170 (351)
T ss_pred HHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHHhhccCCCEEEEeCCC-CCCCCCCCHHHH
Confidence 99999999999999999999999999999999999863 477999999999875333699999997 999999998887
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
.++++ +++.++|+||+|.++ + +... .+. +... +++|+++||||+||+||+|+||++++++ ++
T Consensus 171 ~~l~~---~~~~~~ivDe~y~~~-~-~~~~-----~~~---~~~~----~~vi~~~S~SK~~~~~GlRiG~~v~~~~-~~ 232 (351)
T PRK14807 171 IKIIE---KSRGIVVVDEAYFEF-Y-GNTI-----VDV---INEF----ENLIVLRTLSKAFGLAGLRVGYAVANEN-IL 232 (351)
T ss_pred HHHHH---hCCCEEEEeCcchhh-c-ccch-----HHH---hhhC----CCEEEEecchHhcccchhceeeeecCHH-HH
Confidence 77765 456789999999765 2 3221 111 2222 4899999999999999999999999887 99
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.+.+...+++.++|.++..+|. ++ ++++.++.+++||+.++
T Consensus 233 ~~~~~~~~~~~~~~~~q~~~~~~l~--~~-------~~~~~~~~~~~~r~~l~ 276 (351)
T PRK14807 233 KYLNLVKSPYNINSLSQVIALKVLR--TG-------VLKERVNYILNERERLI 276 (351)
T ss_pred HHHHHccCCCCcCHHHHHHHHHHHh--HH-------HHHHHHHHHHHHHHHHH
Confidence 9999887767788999999999994 22 34444455666666654
No 88
>PRK08637 hypothetical protein; Provisional
Probab=99.97 E-value=2.5e-30 Score=295.55 Aligned_cols=244 Identities=18% Similarity=0.186 Sum_probs=191.6
Q ss_pred ccCCCCCchHHHHHHHHHHHhhcCCCCCCC--CcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHH-HcCCE
Q 043334 643 RQNMSESEIDVTPSIQQYIKSNFGFPIDIN--AEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAAR-FLKAN 719 (903)
Q Consensus 643 ~y~~~~G~~~lr~ala~~l~~~~G~~~~pe--~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~-~~G~~ 719 (903)
.|.+..|.+++|+++++++.+..+ ..+++ ++|++|+|+++++..++.++++|||.|++++|+|+.|...+. ..|++
T Consensus 39 ~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~ 117 (388)
T PRK08637 39 PYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAE 117 (388)
T ss_pred CCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCE
Confidence 377788999999999999987553 22222 379999999999999999999999999999999999999764 68999
Q ss_pred EEEecCCCCCCcccCHHHHHHHhh---cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHh-----CCcEEEEecCCCC
Q 043334 720 IVNIPTESEVGFKMTEKTLVTILE---TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAK-----YGARVVIDTAFSG 791 (903)
Q Consensus 720 vv~v~~~~~~~f~ld~~~L~~~l~---~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k-----~~i~VI~DeaY~~ 791 (903)
++.+|+..+ ++.+|++++++.++ +..+.+++++||| ||||.++|.+++++|+++|++ ++++||+||+|.+
T Consensus 118 vv~v~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~-NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~ 195 (388)
T PRK08637 118 IVTYPIFDE-DGGFDTDALKEALQAAYNKGKVIVILNFPN-NPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFG 195 (388)
T ss_pred EEEecccCC-CCcCCHHHHHHHHHhhccCCCEEEEEeCCC-CCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchh
Confidence 999998422 34589999998876 2333468888897 999999999999999999875 8999999999999
Q ss_pred CccCCCCCCCCchhhhhhhhccCCCCCCce--EEEccCchhcccccceeeEEEeCc-----HHHHHHHHhC-----C-CC
Q 043334 792 LEFNYEGWGGWDLEGCLSKLYSSTNSSFNV--SLLGGLSLKMLTGALKFGFLVLNH-----PQLVDAFSSF-----P-GL 858 (903)
Q Consensus 792 l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v--I~l~S~SK~~g~~GlRiG~lv~~~-----~~li~~l~~~-----~-~~ 858 (903)
+.|++... . ++...+.+. .+++ ++++||||.|++||+|+||++++. +++++.+.+. . ..
T Consensus 196 l~~~~~~~--~---~~~~~~~~~---~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 267 (388)
T PRK08637 196 LFYEDSYK--E---SLFAALANL---HSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNI 267 (388)
T ss_pred cccCCccc--h---hhHHHhhcc---cccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhccc
Confidence 99977542 1 112222221 1354 556799999999999999999753 4477777641 1 24
Q ss_pred CCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 859 SKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 859 ~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++.+.|.++..+|. ++ .+.+++++.+..|++|++.+.
T Consensus 268 ~~~s~~~q~a~~~~l~--~~---~~~~~~~~~~~~~~~r~~~~~ 306 (388)
T PRK08637 268 SNGPHPSQSAVLRALN--SP---EFDKEKQEKFQILKERYEKTK 306 (388)
T ss_pred CCCCcHHHHHHHHHhC--CH---HHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999994 33 456778888888999988764
No 89
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=9.3e-31 Score=295.14 Aligned_cols=249 Identities=16% Similarity=0.234 Sum_probs=198.1
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHH-HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDV-TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL 694 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~l-r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~ 694 (903)
+.++|+.++|++++|+.+.. ..+..| |+. .+++++.+++++|++.+ +|++|+|+++++..++.++++
T Consensus 29 ~~~~l~~Nenp~~~~~~~~~---~~~~~Y------p~~~~~~l~~~~a~~~g~~~~---~I~~~~Gs~e~i~~~~~~~~~ 96 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQLTQ---QTLNRY------PECQPKAVIENYAAYAGVKPE---QVLVSRGADEGIELLIRAFCE 96 (351)
T ss_pred CceEecCCCCCCCCChhhcc---cccccC------CCCChHHHHHHHHHHhCCCHH---HEEEcCCHHHHHHHHHHHhcC
Confidence 46999999999998875411 112223 222 25666677777787544 999999999999999999999
Q ss_pred CC-CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 695 EG-GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 695 pG-D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
+| |.|+++.|+|+.|...++..|++++.+|+++ +|.+|++++++++ +++ +++++|||| ||||.+++.+++++|+
T Consensus 97 ~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~-~lv~l~nPn-NPTG~~~~~~~l~~l~ 171 (351)
T PRK01688 97 PGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGV-KVVYVCSPN-NPTGNLINPQDLRTLL 171 (351)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCC-cEEEEeCCC-CCCCCCCCHHHHHHHH
Confidence 97 8999999999999999999999999999964 5889999999887 455 599999998 9999999999999999
Q ss_pred HHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~ 853 (903)
+.|++ +++||+||+|.++. ... +....+... +++|+++||||.||++|+|+||++++++ +++.+.
T Consensus 172 ~~~~~-~~~vivDEay~~f~--~~~-------s~~~~~~~~----~n~iv~rSfSK~~glaGlRiGy~i~~~~-~i~~l~ 236 (351)
T PRK01688 172 ELTRG-KAIVVADEAYIEFC--PQA-------SLAGWLAEY----PHLVILRTLSKAFALAGLRCGFTLANEE-VINLLL 236 (351)
T ss_pred HhCCC-CcEEEEECchhhcC--CCC-------ChHHHHhhC----CCEEEEecchHhhcCHHHHHhHHhCCHH-HHHHHH
Confidence 99986 68899999996654 221 112222333 4899999999999999999999999887 999999
Q ss_pred hCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 854 SFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 854 ~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+....++++.+.|.++..+|. +.. .+++.+.++.++++|+.+.
T Consensus 237 ~~~~~~~v~~~~~~~a~~~L~--~~~----~~~~~~~~~~~~~~r~~l~ 279 (351)
T PRK01688 237 KVIAPYPLSTPVADIAAQALS--PQG----IAAMRERVAEINANRQWLI 279 (351)
T ss_pred hccCCCCCCHHHHHHHHHHHh--cch----HHHHHHHHHHHHHHHHHHH
Confidence 888777888999999998884 220 2456666666766666654
No 90
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.97 E-value=4.7e-30 Score=292.48 Aligned_cols=277 Identities=14% Similarity=0.118 Sum_probs=220.2
Q ss_pred ccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcC
Q 043334 592 IGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFG 666 (903)
Q Consensus 592 ~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G 666 (903)
..++++.+..++.... ...++.++|+|+.|++++++++.+.+++.+.+.. |....|.+++|+++++++ |
T Consensus 7 ~~~~~~~~~~~~~~~~--~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l----~ 80 (380)
T PRK06225 7 AKVPPSGFKTSNEFFD--YVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL----G 80 (380)
T ss_pred cccCcchhhhHHHHHH--HHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc----C
Confidence 3445555555553211 0134568999999999999999999999888764 444567788888887764 6
Q ss_pred CCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCC-CCCCcccCHHHHHHHhhcC
Q 043334 667 FPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTE-SEVGFKMTEKTLVTILETV 745 (903)
Q Consensus 667 ~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~-~~~~f~ld~~~L~~~l~~~ 745 (903)
++. + +|++|+|+++++..++.+++.+||+|++++|+|..+...++..|++++.++++ ++++|.+|++.+++.++++
T Consensus 81 ~~~--~-~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~ 157 (380)
T PRK06225 81 LDD--D-EALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDEN 157 (380)
T ss_pred CCC--C-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCC
Confidence 543 3 89999999999999999999999999999999999999999999999999985 3446899999999998876
Q ss_pred CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEc
Q 043334 746 KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLG 825 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~ 825 (903)
+ +++++++|+ ||||.++|.+++++|+++|+++|+++|+||+|.++..+. . . ...+.. ++++++.
T Consensus 158 ~-~~v~l~~p~-NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~-------~-~~~~~~-----~~~i~~~ 221 (380)
T PRK06225 158 T-RLIYLIDPL-NPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH-T-------L-AAEYAP-----EHTVTSY 221 (380)
T ss_pred c-eEEEEeCCC-CCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC-C-------c-hhhcCC-----CCEEEEe
Confidence 6 589999998 999999999999999999999999999999997654321 1 1 111211 4799999
Q ss_pred cCchhcccccceeeEEEeCcHHHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 826 GLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 826 S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
||||.+|++|+|+||++++++ +++.+..... ..+.+.++|.++..+|. .. .++++++++.++++++.+
T Consensus 222 s~SK~~g~~G~RiG~i~~~~~-l~~~~~~~~~~~~~~~~~~~~~a~~~l~--~~-----~~~~~~~~~~~~~~~~~l 290 (380)
T PRK06225 222 SFSKIFGMAGLRIGAVVATPD-LIEVVKSIVINDLGTNVIAQEAAIAGLK--VK-----DEWIDRIRRTTFKNQKLI 290 (380)
T ss_pred echhhcCCccceeEEEecCHH-HHHHHHHHHhcccCCCHHHHHHHHHHHh--cc-----hHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887 9998887653 66788999999988884 21 255666677776666654
No 91
>PRK03321 putative aminotransferase; Provisional
Probab=99.97 E-value=2.6e-30 Score=291.47 Aligned_cols=237 Identities=18% Similarity=0.211 Sum_probs=199.5
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc--cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR--QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC 692 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~--y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l 692 (903)
.++|+|+.|++++++++.+.+++.+.+.. +.+..|..++|+++++++ |++ ++ +|++|+|+++++..++..+
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~g~~~lr~~ia~~~----~~~--~~-~I~~~~G~~~~l~~~~~~~ 94 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPDMGAVELRAALAEHL----GVP--PE-HVAVGCGSVALCQQLVQAT 94 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCCCcHHHHHHHHHHHh----CcC--HH-HEEECCCHHHHHHHHHHHh
Confidence 46899999999998888999998876543 223568888888888876 443 44 8999999999999999999
Q ss_pred ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 693 ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 693 ~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
++|||.|+++.|+|..|...++..|++++.++++++ +.+|++.+++.+++++ +++++++|+ ||||.+++.+++.++
T Consensus 95 ~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~-~~v~l~~p~-NPtG~~~~~~~l~~l 170 (352)
T PRK03321 95 AGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRT-RLIFVCNPN-NPTGTVVTPAELARF 170 (352)
T ss_pred cCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCC-CEEEEeCCC-CCcCCCcCHHHHHHH
Confidence 999999999999999999999999999999998743 5689999999987766 589999998 999999999998888
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
++.| +++++||+||+|.++.|++... +.+..+... +++++++||||.||+||+|+||++++++ +++.+
T Consensus 171 ~~~~-~~~~~ii~De~y~~~~~~~~~~------~~~~~~~~~----~~vi~~~S~SK~~g~~GlRiG~~v~~~~-~~~~~ 238 (352)
T PRK03321 171 LDAV-PADVLVVLDEAYVEYVRDDDVP------DGLELVRDH----PNVVVLRTFSKAYGLAGLRVGYAVGHPE-VIAAL 238 (352)
T ss_pred HHhC-CCCeEEEEechHHHhccCcCCC------cHHHHHhhC----CCEEEEecchHHhhhHHHhhhhhcCCHH-HHHHH
Confidence 8876 4799999999999888866432 112223222 4899999999999999999999999876 99999
Q ss_pred HhCCCCCCCcHHHHHHHHHHHh
Q 043334 853 SSFPGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 853 ~~~~~~~~~s~~~Q~aa~~~L~ 874 (903)
.+.....+++.++|.++..+|.
T Consensus 239 ~~~~~~~~~s~~~q~~a~~~l~ 260 (352)
T PRK03321 239 RKVAVPFSVNSLAQAAAIASLA 260 (352)
T ss_pred HHhcCCCCCCHHHHHHHHHHhc
Confidence 9877678899999999998884
No 92
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=6.4e-30 Score=286.73 Aligned_cols=227 Identities=21% Similarity=0.319 Sum_probs=187.6
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
+.+.|+|+.|+|++++|+.+.+++.+++.. | +..|.+++|+++++++ |+ +++ +|++|+|+++++..+
T Consensus 17 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~g~~~lr~~ia~~~----~~--~~~-~I~~t~G~~~~l~~~ 88 (337)
T PRK03967 17 GNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRY-PHITSDPLREAIAEFY----GL--DAE-NIAVGNGSDELISYL 88 (337)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHhhcCccccC-CCCCHHHHHHHHHHHh----Cc--Ccc-eEEEcCCHHHHHHHH
Confidence 457899999999999999999998887643 3 3468888999888876 44 444 999999999999988
Q ss_pred HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHH
Q 043334 689 VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 689 l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
+..+ +||+|+++.|+|+.|...++..|++++.++++. +|.+|++.+++.+ +++ +++++++|+ ||||.+++.++
T Consensus 89 ~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~~~-~~v~~~~P~-NPtG~~~~~~~ 161 (337)
T PRK03967 89 VKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-KNA-SAVFICSPN-NPTGNLQPEEE 161 (337)
T ss_pred HHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-cCC-CEEEEeCCC-CCCCCCCCHHH
Confidence 7766 799999999999999999999999999999864 4779999998865 345 488899997 99999999877
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
+.+++ +++++||+||+|.++. +... ....... +++|+++||||+||+||+|+||++++++ +
T Consensus 162 l~~i~----~~~~~ii~De~y~~~~--~~~~--------~~~~~~~----~~vi~l~S~SK~~~l~GlRiG~iv~~~~-~ 222 (337)
T PRK03967 162 ILKVL----ETGKPVVLDEAYAEFS--GKSL--------IGLIDEY----PNLILLRTFSKAFGLAGIRAGYAIANEE-I 222 (337)
T ss_pred HHHHH----hcCCEEEEECchhhhc--ccch--------HHHHhhC----CCEEEEecchHhhcchhhhheeeecCHH-H
Confidence 76664 4699999999998754 2211 1111222 4799999999999999999999999887 9
Q ss_pred HHHHHhCCCCCCCcHHHHHHHHHHHh
Q 043334 849 VDAFSSFPGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 849 i~~l~~~~~~~~~s~~~Q~aa~~~L~ 874 (903)
++++.+....++++.+.|.++..+|+
T Consensus 223 i~~~~~~~~~~~~~~~~q~~~~~~l~ 248 (337)
T PRK03967 223 IDALYRIKPPFSLNILTMKIVRLALD 248 (337)
T ss_pred HHHHHhhcCCCCCCHHHHHHHHHHHh
Confidence 99999887777889999999999994
No 93
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=4.6e-30 Score=290.92 Aligned_cols=252 Identities=19% Similarity=0.246 Sum_probs=199.4
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccC
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILE 695 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~p 695 (903)
+.++++.+++++++++... ..+..|... +.+++|+++++++ |++ ++ +|++|+|+++++..++.+++.+
T Consensus 32 ~~~~~~~ne~~~~~~~~~~----~~~~~Y~~~-~~~~lr~~ia~~~----~~~--~~-~I~~t~G~~~~l~~~~~~~~~~ 99 (364)
T PRK04781 32 GDVWLNANESAWANPADPD----ASTRRYPDP-QPPGLRSALAALY----GCA--PE-QLLIGRGSDEAIDLLVRALCVP 99 (364)
T ss_pred CCEEeeCCCCCCCCChhhc----chhccCCCC-CHHHHHHHHHHHh----CcC--hH-HEEEeCCHHHHHHHHHHHhcCC
Confidence 4689999999888775321 123455443 4678888888765 554 44 9999999999999999999999
Q ss_pred C-CeEEEcCCCcHHHHHHHHHcCCEEEEecCCC-CCCcccCHHHHHHHh-hcCCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 696 G-GTLCFPAGSNGNYVSAARFLKANIVNIPTES-EVGFKMTEKTLVTIL-ETVKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 696 G-D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~-~~~f~ld~~~L~~~l-~~~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
| |.|++++|+|+.|...++..|++++.+|++. +++|.+|++++.+.+ .+++ +++++++|| ||||.+++.++++++
T Consensus 100 g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~-~lv~l~~p~-NPTG~~~~~~~~~~l 177 (364)
T PRK04781 100 GRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNA-KLVFLCSPS-NPAGSAIALDQIERA 177 (364)
T ss_pred CCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCC-eEEEEcCCC-CCCCCCcCHHHHHHH
Confidence 9 7999999999999999999999999999853 457888999886554 4444 699999998 999999999999999
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
++.|+ ++++||+||+|.++.++.. .....+.. +++|+++||||+||+||+|+||++++++ +++.+
T Consensus 178 ~~~~~-~~~~iI~Deay~~f~~~~~---------~~~~~~~~----~~vi~~~SfSK~~gl~GlRvGy~v~~~~-l~~~l 242 (364)
T PRK04781 178 LQALQ-GKALVVVDEAYGEFSDVPS---------AVGLLARY----DNLAVLRTLSKAHALAAARIGSLIANAE-LIAVL 242 (364)
T ss_pred HHhCC-CCcEEEEeCcchhhcCCcc---------hHHHHhhC----CCEEEEecChhhcccccceeeeeeCCHH-HHHHH
Confidence 99986 4789999999987765321 11222222 4899999999999999999999999987 99999
Q ss_pred HhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 853 SSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 853 ~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+.+..++.+++.|.++..+|. ++. .++..+..+.++++|+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~a~~~l~--~~~----~~~~~~~~~~~~~~r~~l~ 286 (364)
T PRK04781 243 RRCQAPYPVPTPCAALAEQALS--APA----LAVTARRVAEVRAERERLH 286 (364)
T ss_pred HhccCCCCCCHHHHHHHHHHHh--ccc----HHHHHHHHHHHHHHHHHHH
Confidence 9998888889999999999994 331 1334444456777777664
No 94
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.97 E-value=4.2e-30 Score=287.41 Aligned_cols=236 Identities=16% Similarity=0.207 Sum_probs=186.5
Q ss_pred CCeEEccCCCCCCCCcH-HHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc
Q 043334 615 SGLIHMDVDQSFLPIPS-LVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI 693 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~-~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~ 693 (903)
.++|+|+.|++++++|+ .+.+ .++..|.. +..+||+++++++ |. + +|++|+|++++|..++ .+
T Consensus 20 ~~~i~l~~ne~p~~~~~~~~~~---~~~~~yp~--~~~~Lr~~ia~~~----~~----~-~I~it~Gs~~al~~~~--~~ 83 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPVPAIPA---DAWARLPE--TDDGLEAAARAYY----GA----P-QLLPVAGSQAAIQALP--RL 83 (330)
T ss_pred HHheeecCCcCCCCCCCcccCH---HHHHhCCC--ChHHHHHHHHHHh----CC----C-CEEECcCHHHHHHHHH--Hc
Confidence 35799999988876553 2222 33444533 4477888877765 42 3 8999999999999875 45
Q ss_pred cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 694 LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 694 ~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
.+||+|++++|+|+.|...++..|++++.+|++ .+++.++ ++ ++++++||| ||||.++|.+++++|+
T Consensus 84 ~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~-~~-~~v~l~nP~-NPTG~~~s~~~l~~l~ 150 (330)
T PRK05664 84 RAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD-SL-DVLVVVNPN-NPTGRRFDPARLLAWH 150 (330)
T ss_pred cCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc-CC-CEEEEeCCc-CCCCCccCHHHHHHHH
Confidence 799999999999999999999999999999863 2344443 44 489999998 9999999999999999
Q ss_pred HHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~ 853 (903)
++|++++++||+||+|.++. ... + +..+.. .+++|+++||||+||+||+|+||++++++ +++.+.
T Consensus 151 ~~~~~~~~~iI~DE~y~~~~--~~~-------s-~~~~~~----~~~vi~~~SfSK~~gl~GlRiG~~v~~~~-l~~~~~ 215 (330)
T PRK05664 151 ARLAARGGWLVVDEAFMDNT--PQH-------S-LAACAH----RPGLIVLRSFGKFFGLAGARLGFVLAEPA-LLRALA 215 (330)
T ss_pred HHHHhcCCEEEEECCcccCC--Ccc-------c-cccccc----CCCEEEEeeccccccCCCcceEEEEeCHH-HHHHHH
Confidence 99999999999999996442 211 1 122222 25899999999999999999999999987 999999
Q ss_pred hCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 854 SFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 854 ~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.......+.+.|.++..+|. +. .+.+.+++.+++||+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~L~--~~------~~~~~~~~~~~~~r~~l~ 256 (330)
T PRK05664 216 ELLGPWTVSGPTRWLAQAALA--DT------PWQRRQRERLLAASQRLA 256 (330)
T ss_pred HhcCCCCCCHHHHHHHHHHHh--Ch------HHHHHHHHHHHHHHHHHH
Confidence 887767788999999999994 32 445678888998888875
No 95
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=8.6e-30 Score=288.79 Aligned_cols=257 Identities=17% Similarity=0.180 Sum_probs=210.8
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+.++++|+.|+|++++++.+.+++.+.+.. |... +..++|+++++++ |++ ++ +|++|+|+++++..++
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-~~~~lr~~ia~~~----~~~--~~-~i~~t~G~~~~l~~~~ 101 (367)
T PRK02731 30 GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDG-SGFELKAALAEKF----GVD--PE-RIILGNGSDEILELLA 101 (367)
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-cHHHHHHHHHHHh----CcC--HH-HEEEcCCHHHHHHHHH
Confidence 5667999999999998888888888877643 3322 3356777777664 554 33 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.+++++||.|++++|+|..|...++..|++++.++++ +|.+|++.+++.+++++ ++|++++|+ ||||.+++.+++
T Consensus 102 ~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~~~~~-~~v~l~~p~-nptG~~~~~~~l 176 (367)
T PRK02731 102 RAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK---DYGHDLDAMLAAVTPRT-RLVFIANPN-NPTGTYLPAEEV 176 (367)
T ss_pred HHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEeccc---CCCCCHHHHHHHhCCCC-cEEEEeCCC-CCCCcCCCHHHH
Confidence 9999999999999999999999999999999999983 46799999999988666 589999998 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
.+|++.|+ +|++||+||+|.++.+++...+ .+..++.. +++|+++||||.||++|+|+||++++++ ++
T Consensus 177 ~~l~~~~~-~~~~li~De~y~~~~~~~~~~~------~~~~~~~~----~~~i~~~S~SK~~g~~G~RiG~l~~~~~-~~ 244 (367)
T PRK02731 177 ERFLAGVP-PDVLVVLDEAYAEYVRRKDYED------GLELVAKF----PNVVVTRTFSKAYGLAGLRVGYGIAPPE-II 244 (367)
T ss_pred HHHHHhCC-CCcEEEEECcHHHhccCcCccc------HHHHHhhc----CCEEEEeeehHhhcCcccceeeeeCCHH-HH
Confidence 99999875 6999999999988887654321 12222221 4899999999999999999999999987 99
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+.+.....+.+.++|.++..+|. +. +++++.++.++++++.+.
T Consensus 245 ~~l~~~~~~~~~~~~~~~~a~~~l~--~~------~~~~~~~~~~~~~~~~l~ 289 (367)
T PRK02731 245 DALNRVRQPFNVNSLALAAAVAALD--DD------AFVEKSRALNAEGMAWLT 289 (367)
T ss_pred HHHHHccCCCCCCHHHHHHHHHHhC--CH------HHHHHHHHHHHHHHHHHH
Confidence 9998877767788999999999994 22 567777888888877664
No 96
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-30 Score=276.40 Aligned_cols=280 Identities=19% Similarity=0.259 Sum_probs=232.8
Q ss_pred CCCCeEEccCCCCCCCC---cHHHHH------------HHHHHHHccCCCCCchHHHHHHHHHHHhhcCC--CCCCCCcE
Q 043334 613 PNSGLIHMDVDQSFLPI---PSLVKA------------AIFESFARQNMSESEIDVTPSIQQYIKSNFGF--PIDINAEF 675 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~---p~~v~~------------al~~al~~y~~~~G~~~lr~ala~~l~~~~G~--~~~pe~~I 675 (903)
++.++|.|+..+|.+.. -.++.+ .....+..|..-.|.+.+|+++++++.+..|- +.+|+ ++
T Consensus 71 Np~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~-~~ 149 (471)
T KOG0256|consen 71 NPLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPE-RV 149 (471)
T ss_pred CchHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhhHhhcccccCchHHHHHHHHHHHHHhCCCCccCcc-ce
Confidence 45578999998887531 111111 11112333556679999999999999988774 57888 89
Q ss_pred EecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHH-HcCCEEEEecCCCCCCcccCHHHHHHHhhc-----CCCcE
Q 043334 676 IYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAAR-FLKANIVNIPTESEVGFKMTEKTLVTILET-----VKKPW 749 (903)
Q Consensus 676 ~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~-~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-----~~~~~ 749 (903)
++++|++.+...+..+|++|||..++|.|.|+++..-++ ..|+++++|.+..+++|+++.+++++++.. .+.+.
T Consensus 150 Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkG 229 (471)
T KOG0256|consen 150 VVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKG 229 (471)
T ss_pred EEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeE
Confidence 999999999999999999999999999999999988776 469999999999999999999999988764 34568
Q ss_pred EEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 750 VYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 750 vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
|+++||+ ||.|.+++++++..++++|.++|++||+||+|+..+|+... +.+..++.....-. .+++.+++|+||
T Consensus 230 vlitNPs-NPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~--F~Sv~ev~~~~~~~---~~rvHivyslSK 303 (471)
T KOG0256|consen 230 VLITNPS-NPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSE--FRSVLEVRKDPHLD---PDRVHIVYSLSK 303 (471)
T ss_pred EEEeCCC-CCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccC--ceEHHHHhhccccC---CCcEEEEEEecc
Confidence 9999997 99999999999999999999999999999999999998774 35554544433212 269999999999
Q ss_pred hcccccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHhC
Q 043334 830 KMLTGALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLKE 903 (903)
Q Consensus 830 ~~g~~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~e 903 (903)
.+|+||+|+|.+...++.++.+.+++.....+|+..|+.++.+|+ +. ...+.++.+.+++++.|.+++.+
T Consensus 304 D~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLS--D~--~f~~~yl~en~~Rl~~rh~~~~~ 373 (471)
T KOG0256|consen 304 DFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLS--DE--EFTREYLRENNKRLRIRHRYIVE 373 (471)
T ss_pred ccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhc--hH--HHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998999999999999999999999999995 22 34578899999999999888753
No 97
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.97 E-value=1.7e-29 Score=274.15 Aligned_cols=249 Identities=17% Similarity=0.170 Sum_probs=208.5
Q ss_pred ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEE
Q 043334 643 RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVN 722 (903)
Q Consensus 643 ~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~ 722 (903)
+|+.++|.+++...+.++..-....+...+++|++|+|.+.++..+++.+|++||.|+++.++|+......+..|+++++
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ip 174 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIP 174 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEe
Confidence 68889999999999988665233334334679999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCcccCHHHHHHHhhcC-------CCcEEEEECCC-CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCcc
Q 043334 723 IPTESEVGFKMTEKTLVTILETV-------KKPWVYISGPT-INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEF 794 (903)
Q Consensus 723 v~~~~~~~f~ld~~~L~~~l~~~-------~~~~vil~~P~-~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f 794 (903)
|+++.+ | ++++.|++.+..+ .++-|++|-|+ |||||..+|.+++++|+++|+||+++||+||+|..|.|
T Consensus 175 v~md~~-G--i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~ 251 (472)
T KOG0634|consen 175 VKMDQD-G--IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQM 251 (472)
T ss_pred ccccCC-C--CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeec
Confidence 999753 3 8999999988754 23679999999 99999999999999999999999999999999999988
Q ss_pred CCCC------CCCCchhhh-------hhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CC
Q 043334 795 NYEG------WGGWDLEGC-------LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LS 859 (903)
Q Consensus 795 ~~~~------~s~~s~~~~-------~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~ 859 (903)
+... .+..+-..+ +..++ .++|||.+.||||.++ ||+|+||+.+++. +++.+.+..+ +.
T Consensus 252 ~~y~~~~~~~~p~~s~~~f~k~l~~sflslD----tdGrVIr~dSFSKiia-PGlRlG~it~~~~-~l~ril~~ae~~t~ 325 (472)
T KOG0634|consen 252 NTYNPSLELESPAHSSSMFLKSLVPSFLSLD----TDGRVIRNDSFSKIIA-PGLRLGWITGNSL-FLKRILDLAEVATS 325 (472)
T ss_pred cccCCCccccCccccHHHHHHhhcCCccccc----ccccEEeccchhhhhc-CcceeEEeecCHH-HHHHHhhhcceeec
Confidence 7411 011111111 11222 2479999999999996 9999999999998 8898888776 78
Q ss_pred CCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 860 KPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 860 ~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++..+|.++.++|. .++ .+++.+|+.+++..|..||+.+.
T Consensus 326 ~pSg~sq~iv~a~l~-~wg-qeG~~~wi~~l~~~Yt~Rrn~~l 366 (472)
T KOG0634|consen 326 GPSGFSQGIVYAMLK-RWG-QEGFLRWIQHLRSSYTERRNALL 366 (472)
T ss_pred CcccccHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999995 455 46788999999999999999875
No 98
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.97 E-value=1.2e-29 Score=284.83 Aligned_cols=239 Identities=15% Similarity=0.170 Sum_probs=185.6
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL 694 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~ 694 (903)
.++++|+.++|++++|+..... ..+..|... ..+|+ +.+++++|++ +++ +|++|+|+++++..+.. +++
T Consensus 24 ~~~i~ls~Nenp~~~~~~~~~~--~~~~~Yp~~--~~~L~----~~ia~~~~~~-~~~-~I~i~~Gs~e~i~~l~~-~~~ 92 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPVPA--DAWRRLPED--DDGLA----ACAARYYGAP-DAA-HVLPVAGSQAAIRALPA-LLP 92 (339)
T ss_pred hhhceeccCCCCCCCCCCCCCH--HHHHhCCCc--hHHHH----HHHHHHhCCC-Ccc-cEEECcCHHHHHHHHHH-hcC
Confidence 4689999999998876322211 234445322 24444 4555567875 234 89999999999997654 578
Q ss_pred CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHH
Q 043334 695 EGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILT 774 (903)
Q Consensus 695 pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ 774 (903)
+|| |++++|+|+.|...++..|++++.++++. +.+. +.. +++++|||| ||||.++|.+++++|++
T Consensus 93 ~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~~----~~~-~~v~l~nPn-NPTG~~~s~~~l~~l~~ 157 (339)
T PRK06959 93 RGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTLP----AAL-THLIVVNPN-NPTAERLPAARLLRWHA 157 (339)
T ss_pred CCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhcc----ccC-CEEEEeCCC-CCCCCCCCHHHHHHHHH
Confidence 877 88999999999999999999999998753 1221 223 489999998 99999999999999999
Q ss_pred HHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHh
Q 043334 775 VCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 775 ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~ 854 (903)
.|++++.+||+||+|.++.+. . +.. .+... +++|+++||||.||+||+|+||++++++ +++.+.+
T Consensus 158 ~~~~~~~~vI~DEay~~~~~~--~-------s~~-~~~~~----~~vi~l~SfSK~~gl~GlRiGy~v~~~~-li~~l~~ 222 (339)
T PRK06959 158 QLAARGGTLIVDEAFADTLPA--A-------SLA-AHTDR----PGLVVLRSVGKFFGLAGVRAGFVLAAPA-LLAALRD 222 (339)
T ss_pred HHHHcCCEEEEECCCccCCCc--c-------cch-hccCC----CCEEEEecChhhcCCcchheEEEecCHH-HHHHHHH
Confidence 999999999999999876532 1 111 12122 4799999999999999999999999987 9999999
Q ss_pred CCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 855 FPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 855 ~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
....++.+.+.|.++..+|+ ++ ++.++.++.|+++|+.+.
T Consensus 223 ~~~~~~vs~~~q~a~~~~L~--~~------~~~~~~~~~~~~~r~~l~ 262 (339)
T PRK06959 223 ALGAWTVSGPARHAVRAAFA--DA------AWQAAMRERLAADGARLA 262 (339)
T ss_pred hcCCCCCcHHHHHHHHHHhC--cH------HHHHHHHHHHHHHHHHHH
Confidence 88777789999999999994 33 566778888988888775
No 99
>PRK08354 putative aminotransferase; Provisional
Probab=99.97 E-value=4.8e-29 Score=276.57 Aligned_cols=237 Identities=18% Similarity=0.253 Sum_probs=183.9
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI 693 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~ 693 (903)
..++|+|+.|+|+++ |+.+.+++.+++.... +++. ...+++.+++++| + +|++|+|+++++..++..+
T Consensus 7 ~~~~i~l~~~~np~~-p~~~~~a~~~~~~~~~---~yp~-~~~l~~~ia~~~~---~---~I~vt~G~~~al~~~~~~~- 74 (311)
T PRK08354 7 EEGLIDFSASVNPYP-PEWLDEMFERAKEISG---RYTY-YEWLEEEFSKLFG---E---PIVITAGITEALYLIGILA- 74 (311)
T ss_pred ccceeEecCCCCCCC-CHHHHHHHHHHHHHhh---cCCC-hHHHHHHHHHHHC---C---CEEECCCHHHHHHHHHHhh-
Confidence 456999999998886 5788888877654321 1221 2334455555555 2 6999999999999877544
Q ss_pred cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 694 LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 694 ~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
.+||.|++++|+|+.|...++..|++++.++ +|++.+++.++ ++ +++++++|| ||||.+++.+++++|+
T Consensus 75 ~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~-~~vi~~~P~-NPTG~~~~~~~l~~l~ 143 (311)
T PRK08354 75 LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RN-SVVFFCNPN-NPDGKFYNFKELKPLL 143 (311)
T ss_pred CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CC-CEEEEecCC-CCCCCccCHHHHHHHH
Confidence 5999999999999999999999999997764 56888888776 34 589999998 9999999999999999
Q ss_pred HHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~ 853 (903)
++|+++|++||+||+|.++.|++... . . +++|+++||||+|++||+|+||+++ +++.+.
T Consensus 144 ~~a~~~~~~li~De~y~~f~~~~~~~------------~-~----~~vi~~~S~SK~~~l~GlRiG~~v~----~~~~l~ 202 (311)
T PRK08354 144 DAVEDRNALLILDEAFIDFVKKPESP------------E-G----ENIIKLRTFTKSYGLPGIRVGYVKG----FEEAFR 202 (311)
T ss_pred HHhhhcCcEEEEeCcchhcccccccc------------C-C----CcEEEEeccHhhcCCccceeeeeee----hHHHHH
Confidence 99999999999999999888865321 1 1 4899999999999999999999998 456677
Q ss_pred hCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 854 SFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 854 ~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
+.......+...|.++..+++ +. .+++.+.++.++++++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~l 243 (311)
T PRK08354 203 SVRMPWSIGSTGYAFLEFLIE--DD-----FEHLRKTMPLIWREKERF 243 (311)
T ss_pred HcCCCccCCHHHHHHHHHHHH--hH-----HHHHHHHHHHHHHHHHHH
Confidence 666666667777777777773 22 145556666666666655
No 100
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.8e-29 Score=284.92 Aligned_cols=250 Identities=17% Similarity=0.246 Sum_probs=198.2
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI 693 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~ 693 (903)
+.+.++|+.|+|++++++.+ ....+..|... +.+++|++++++ +|++.+ +|++|+|+++++..++.+++
T Consensus 30 ~~~~~~l~~ne~~~~~~~~~---~~~~~~~Yp~~-~~~~Lr~aia~~----~~~~~~---~I~it~Gs~~~i~~~~~~~~ 98 (354)
T PRK04635 30 GRGDIWINANESPFNNEYKL---DLARLNRYPEC-QPPELINAYSAY----AGVAPE---QILTSRGADEAIELLIRAFC 98 (354)
T ss_pred CCCcEEeeCCCCCCCCChhh---hhHHhccCCCC-CHHHHHHHHHHH----hCcCHH---HEEEeCCHHHHHHHHHHHhc
Confidence 34679999999999888653 11234455443 578888888875 466544 99999999999999999999
Q ss_pred cCC-CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 694 LEG-GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 694 ~pG-D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
+|| |.|++++|+|+.|...++..|++++.+|++. +|.+|++.+++ + +++ ++|++|||| ||||.+++.+++++|
T Consensus 99 ~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~-~li~i~nP~-NPTG~~~~~~~l~~l 172 (354)
T PRK04635 99 EPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGA-KLVFICNPN-NPTGTVIDRADIEQL 172 (354)
T ss_pred CCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCC-CEEEEeCCC-CCCCccCCHHHHHHH
Confidence 999 8999999999999999999999999999963 57789998874 3 455 599999998 999999999999999
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
++.|+ +++||+||+|.++... . +. ....... +++|+++||||.||+||+|+||++++++ +++.+
T Consensus 173 ~~~~~--~~~vivDeay~~~~~~--~----s~---~~~~~~~----~~~iv~~S~SK~~~l~GlRlG~~i~~~~-~~~~l 236 (354)
T PRK04635 173 IEMTP--DAIVVVDEAYIEFCPE--Y----SV---ADLLASY----PNLVVLRTLSKAFALAGARCGFTLANEE-LIEIL 236 (354)
T ss_pred HHhCC--CcEEEEeCchHhhccC--c----ch---HHHHhhC----CCEEEEechHHHhhhhHHHHhhhhCCHH-HHHHH
Confidence 99876 4999999999765422 1 11 1111222 4799999999999999999999999887 99999
Q ss_pred HhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 853 SSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 853 ~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+.....+.+.+.|.++..+|. ..+ .+++.+.++.++++|+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~a~~~l~-~~~-----~~~~~~~~~~~~~~r~~l~ 280 (354)
T PRK04635 237 MRVIAPYPVPLPVSEIATQALS-EAG-----LARMKFQVLDLNAQGARLQ 280 (354)
T ss_pred HhhcCCCCCCHHHHHHHHHHHh-ccc-----HHHHHHHHHHHHHHHHHHH
Confidence 8876677788899999999994 222 2345666777777777664
No 101
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.97 E-value=5.1e-29 Score=280.06 Aligned_cols=255 Identities=18% Similarity=0.299 Sum_probs=208.3
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+.++|+|++|+|++++|+.+.+++.++.. .|....| +++|+++++++ |++ ++ +|++|+|+++++..++
T Consensus 17 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~-~~lr~~ia~~~----~~~--~~-~i~~~~G~~~~l~~~~ 88 (346)
T TIGR01141 17 GGKEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPDP-AELKQALADYY----GVD--PE-QILLGNGSDEIIELLI 88 (346)
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCCH-HHHHHHHHHHh----CcC--hH-HEEEcCCHHHHHHHHH
Confidence 346799999999999999999999888753 2443333 67777777665 443 34 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.+++++||+|++++|+|+.+...++..|++++.++++. ++.+|++.+++.+.+++ ++|++++|+ ||||.+++.+++
T Consensus 89 ~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~~~~-~~v~l~~p~-NptG~~~~~~~~ 164 (346)
T TIGR01141 89 RAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDE--DGQLDLEDILVAIDDKP-KLVFLCSPN-NPTGNLLSRSDI 164 (346)
T ss_pred HHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCC--CCCCCHHHHHHhcCCCC-CEEEEeCCC-CCCCCCCCHHHH
Confidence 99999999999999999999999999999999999975 36799999999877666 589999997 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
.++++.|+ +++++|+||+|..+.+++.. . +.. ... +++++++||||.||++|+|+||++++++ ++
T Consensus 165 ~~l~~~~~-~~~~ii~D~~y~~~~~~~~~---~---~~~---~~~----~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~ 229 (346)
T TIGR01141 165 EAVLERTP-EDALVVVDEAYGEFSGEPST---L---PLL---AEY----PNLIVLRTLSKAFGLAGLRIGYAIANAE-II 229 (346)
T ss_pred HHHHHhCC-CCcEEEEECchhhhcCCccH---H---HHH---hhC----CCEEEEehhhHhhhchhhhceeeecCHH-HH
Confidence 99999887 79999999999866543211 1 112 122 3699999999999999999999999877 99
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+......++.+.++|.++..++. +. .++.+.++.++++++.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 274 (346)
T TIGR01141 230 DALNKVRAPFNLSRLAQAAAIAALR--DD------DFIEKTVEEINAERERLY 274 (346)
T ss_pred HHHHhccCCCCCCHHHHHHHHHHhC--CH------HHHHHHHHHHHHHHHHHH
Confidence 9998877777788999999999884 22 256677777777777664
No 102
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=6.1e-29 Score=278.26 Aligned_cols=240 Identities=17% Similarity=0.128 Sum_probs=182.4
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccC
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILE 695 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~p 695 (903)
.+|+|+.++|+++.. ..+..|. ..-..+||++++++ +|++.. +|++|+|+++++..++. +++|
T Consensus 17 ~~i~l~~Nenp~~~~--------~~~~~Yp-~~~~~~lr~~ia~~----~~~~~~---~I~it~Gs~~~l~~~~~-~~~~ 79 (332)
T PRK06425 17 RIIDFSANINDFMDI--------GDISIYP-EISYTDIEDQIKIY----TQGLKI---KVLIGPGLTHFIYRLLS-YINV 79 (332)
T ss_pred CEEEeccccCCCcCh--------hhcccCc-CcCHHHHHHHHHHH----hCCCcc---eEEECCCHHHHHHHHHH-HhCC
Confidence 689999999998522 1223342 22355666666654 566543 89999999999999886 5677
Q ss_pred CCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHH
Q 043334 696 GGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTV 775 (903)
Q Consensus 696 GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~i 775 (903)
|+ |++++|+|+.|...++..|++++.+|++. +.+|.+.+++ .++ +++++|||| ||||.++|.+++++|+++
T Consensus 80 ~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~-k~v~l~nP~-NPTG~~~s~~~~~~l~~~ 150 (332)
T PRK06425 80 GN-IIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNF-DLIFIVSPD-NPLGNLISRDSLLTISEI 150 (332)
T ss_pred Cc-EEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCC-CEEEEeCCC-CCcCCccCHHHHHHHHHH
Confidence 64 77779999999999999999999999964 3356666553 244 599999998 999999999999999999
Q ss_pred HHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhC
Q 043334 776 CAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 776 a~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~ 855 (903)
|++++++||+||+|.++.+++.. +.....+.. +++|+++||||+||+||+|+||++++++ +++.+.+.
T Consensus 151 a~~~~~~iI~DE~Y~~~~~~~~~-------~~~~~~~~~----~~vi~~~SfSK~~~l~GlRiGy~v~~~~-li~~l~~~ 218 (332)
T PRK06425 151 CRKKGALLFIDEAFIDFVPNRAE-------EDVLLNRSY----GNVIIGRSLTKILGIPSLRIGYIATDDY-NMKISRKI 218 (332)
T ss_pred HHHcCCEEEEecchhccccccch-------hHHHHhccC----CCEEEEeecHHhcCCchhhheeeecCHH-HHHHHHHc
Confidence 99999999999999988775421 122222222 4899999999999999999999999987 99999987
Q ss_pred CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 856 PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 856 ~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
......+.+. ..++. .+ ..+.+++++++.|++||+.++
T Consensus 219 ~~~~~~~~~~----~~~l~--~~---~~~~~~~~~~~~~~~~r~~l~ 256 (332)
T PRK06425 219 TEPWSVCDPA----IDFIR--SI---DLDYVAKHSLDIMENERSYLI 256 (332)
T ss_pred CCCCccCHHH----HHHHH--Hh---hhHHHHHHHHHHHHHHHHHHH
Confidence 6544444433 23342 11 124567788999999999875
No 103
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=8.6e-29 Score=279.89 Aligned_cols=252 Identities=16% Similarity=0.217 Sum_probs=202.5
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEe-cCchHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIY-ADCSQSLFNKL 688 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~v-t~Gs~~al~~l 688 (903)
.+.++|+|+.|+|++++++.+++++.+.+.. |... +.+++|++++++ +|++. + +|++ |+|+++++..+
T Consensus 32 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~~~~lr~~ia~~----~~~~~--~-~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 32 DPESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEP-DAPELREALSKY----TGVPV--E-NIIVGGDGMDEVIDTL 103 (361)
T ss_pred CccceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH----hCCCH--H-HEEEeCCCHHHHHHHH
Confidence 4458999999999999999998888776543 3222 336667776665 46543 3 8999 89999999999
Q ss_pred HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHH
Q 043334 689 VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 689 l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
+.+++++||.|++++|+|+.|...++..|++++.++.+ ++|.+|++.+++.+++++ +++++++|+ ||||.+++.++
T Consensus 104 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~~~~~-~~v~~~~p~-nptG~~~~~~~ 179 (361)
T PRK00950 104 MRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVDSVLNAITEKT-KVIFLCTPN-NPTGNLIPEED 179 (361)
T ss_pred HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHhccCC-CEEEEeCCC-CCCCCCcCHHH
Confidence 99999999999999999999999999999999999854 467899999999887665 589999998 99999999776
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
+.+| |+++|++||+||+|.++. +... .+. +... +++++++||||+||+||+|+||++++++ +
T Consensus 180 l~~l---~~~~~~~li~De~y~~~~--~~~~-----~~~---~~~~----~~vi~~~S~SK~~g~~GlRiG~~~~~~~-~ 241 (361)
T PRK00950 180 IRKI---LESTDALVFVDEAYVEFA--EYDY-----TPL---ALEY----DNLIIGRTFSKVFGLAGLRIGYGFVPEW-L 241 (361)
T ss_pred HHHH---HHHCCcEEEEECchhhhC--ccch-----HHH---HHhc----CCEEEEEeehHhhcCchhhcchhcCCHH-H
Confidence 6655 567799999999997654 2211 111 1222 4799999999999999999999999987 9
Q ss_pred HHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 849 VDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 849 i~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.+.+....++.+.+.|.++..+|. +. +++++.++.++++|+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~a~~~l~--~~------~~~~~~~~~~~~~r~~l~ 287 (361)
T PRK00950 242 IDYYMRAKTPFSLTRLSQAAAIAALS--DK------EYIEKSIEHGIKSREYLY 287 (361)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHhc--CH------HHHHHHHHHHHHHHHHHH
Confidence 99998887767788999999999994 22 567777788888888765
No 104
>PRK07908 hypothetical protein; Provisional
Probab=99.96 E-value=2.7e-28 Score=274.80 Aligned_cols=248 Identities=16% Similarity=0.132 Sum_probs=196.4
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+++++||+.|+|++++|+.+++++.+.+. .|.+..|.+++|+++++++ |++ ++ +|++|+|+++++..++
T Consensus 20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~----~~~--~~-~I~it~Ga~~al~~~~ 92 (349)
T PRK07908 20 AGPGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARH----GRT--PD-EVLLLAGAAEGFALLA 92 (349)
T ss_pred CCCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHh----CcC--hh-hEEECCCHHHHHHHHH
Confidence 467899999999999999999999887653 3655678899999998875 554 44 9999999999999888
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
. +++| .++++.|+|..+...++..|++++.++++. +|.+|++.++ +++ ++++++||+ ||||.++|.+++
T Consensus 93 ~--l~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l~----~~~-~~i~l~np~-NPTG~~~~~~~l 161 (349)
T PRK07908 93 R--LRPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAVP----DDA-DLVVIGNPT-NPTSVLHPAEQL 161 (349)
T ss_pred h--cCCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHhc----cCC-CEEEEcCCC-CCCCCCcCHHHH
Confidence 7 5674 577789999999999999999999999974 3778888553 344 589999998 999999997765
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
.+ +|+ ++.++|+||+|+++.+ +... + +...+ . +++++++||||+||+||+|+||++++++ ++
T Consensus 162 ~~---l~~-~~~~iIvDe~y~~~~~-~~~~---~----l~~~~-~----~~~i~i~S~SK~~~l~GlRiG~~~~~~~-~~ 223 (349)
T PRK07908 162 LA---LRR-PGRILVVDEAFADAVP-GEPE---S----LAGDD-L----PGVLVLRSLTKTWSLAGLRVGYALGAPD-VL 223 (349)
T ss_pred HH---HHh-cCCEEEEECcchhhcc-CCcc---c----ccccc-C----CCEEEEeecccccCCccceeeeeecCHH-HH
Confidence 54 455 4778888999987643 3221 1 11111 1 4799999999999999999999999887 99
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+.+....+..+.+.|.++..++. .. ..++++++++.|++||+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~a~~~~~~--~~----~~~~~~~~~~~~~~~r~~l~ 270 (349)
T PRK07908 224 ARLTRGRAHWPVGTLQLEAIAACCA--PR----AVAEAAADAARLAADRAEMV 270 (349)
T ss_pred HHHHhcCCCCCccHHHHHHHHHHhc--cc----chHHHHHHHHHHHHHHHHHH
Confidence 9998877666777888887777773 21 13677888999999998875
No 105
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.96 E-value=2.4e-27 Score=265.19 Aligned_cols=245 Identities=20% Similarity=0.228 Sum_probs=197.2
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
.++++.++|+.|.|++++| ..+.....+..|....+ +++|+++++++ |++ ++ +|++|+|+++++..+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~y~~~~~-~~lr~~la~~~----~~~--~~-~i~~t~G~~~~i~~~~~~ 83 (330)
T TIGR01140 14 IPPEDWLDFSTGINPLGPP--VPPIPASAWARYPDPEY-DELRAAAAAYY----GLP--AA-SVLPVNGAQEAIYLLPRL 83 (330)
T ss_pred CChhheeEccccCCCCCCC--hhhcchHHHhhCCCccH-HHHHHHHHHHh----CCC--hh-hEEECCCHHHHHHHHHHH
Confidence 4577899999999988766 33333444555655554 78888877764 554 44 899999999999997655
Q ss_pred hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHH
Q 043334 692 CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIEN 771 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~e 771 (903)
+.+| .|++++|+|..|...++..|.+++.++ |++.+++.+. ++ +++++++|+ ||||.+++.+++++
T Consensus 84 -l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~-~~v~i~~p~-NPtG~~~~~~~~~~ 149 (330)
T TIGR01140 84 -LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-EL-DVLVLCNPN-NPTGRLIPPETLLA 149 (330)
T ss_pred -hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cC-CEEEEeCCC-CCCCCCCCHHHHHH
Confidence 5778 699999999999999999999999987 5788888874 44 489999998 99999999999999
Q ss_pred HHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH
Q 043334 772 ILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 772 I~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~ 851 (903)
|+++|+++|++||+||+|.++.++. . .....+. .+++|+++||||+||+||+|+||++++++ ++++
T Consensus 150 l~~~a~~~~~~ii~De~y~~~~~~~-~--------~~~~~~~----~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~ 215 (330)
T TIGR01140 150 LAARLRARGGWLVVDEAFIDFTPDA-S--------LAPQAAR----FPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LLAR 215 (330)
T ss_pred HHHHhHhcCCEEEEECcccccCCcc-c--------hhhHhcc----CCCEEEEEecchhhcCchhhhhheeCCHH-HHHH
Confidence 9999999999999999998766531 1 1111121 15899999999999999999999999987 9999
Q ss_pred HHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 852 FSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 852 l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.......++++++|.++..++. +. ++.+..++.++++++.+.
T Consensus 216 l~~~~~~~~~s~~~q~~~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 258 (330)
T TIGR01140 216 LREALGPWTVNGPARAAGRAALA--DT------AWQAATRARLAAERARLA 258 (330)
T ss_pred HHhcCCCCCchHHHHHHHHHHHh--ch------HHHHHHHHHHHHHHHHHH
Confidence 99887777788999999999994 32 455667788888888765
No 106
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.6e-24 Score=220.60 Aligned_cols=253 Identities=15% Similarity=0.216 Sum_probs=199.3
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHHccC-CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFARQN-MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~-~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
+-|++++.++..+++..|+|+-++. .|. +..-...++.++ +. ..+..+| +|+++.|+.+.++.+++
T Consensus 38 a~G~~iv~ld~~e~~ryPdP~q~ef------k~~~~d~rnk~ls~a~----~~--dkpLt~d-nic~GvGsDE~ID~iiR 104 (375)
T KOG0633|consen 38 ALGRDIVKLDANENPRYPDPEQMEF------KYVYPDPRNKRLSDAL----AQ--DKPLTSD-NICVGVGSDELIDLIIR 104 (375)
T ss_pred hcCCCceEeccccCCCCcCHHHccc------ccccCCcccchhhhhc----cc--CCCCCcc-ceEEecCcHHHHHHHHh
Confidence 4677899999988876666654221 111 111122333333 22 2345555 99999999999999999
Q ss_pred HhccCC-CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC-CCcEEEEECCCCCCcccCCCHHH
Q 043334 691 CCILEG-GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV-KKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 691 ~l~~pG-D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-~~~~vil~~P~~NPTG~v~s~ee 768 (903)
+.|.|| +.|++..|+|..|.-.+...+++++.+|+.+ +|+++.+++.+.+... ..+++++++|+ ||||..++.++
T Consensus 105 ~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPg-NPtg~~ik~~d 181 (375)
T KOG0633|consen 105 CVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPG-NPTGSIIKEDD 181 (375)
T ss_pred heecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCC-CCCcccccHHH
Confidence 999999 8999999999999999999999999999976 7999999999988754 45699999999 99999999999
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
+.+|++.-. |.+|++||+| +.|.+.. +.+.....++ +.+++.+|||+||++|+|+||-..+.+ +
T Consensus 182 i~KiLe~p~--nglVVvDEAY--idFsg~~-------S~~~lV~kYp----NLivlqTlSKsfGLAGiRvG~~~~~~~-i 245 (375)
T KOG0633|consen 182 ILKILEMPD--NGLVVVDEAY--IDFSGVE-------SRMKLVKKYP----NLIVLQTLSKSFGLAGIRVGYGAFPLS-I 245 (375)
T ss_pred HHHHHhCCC--CcEEEEeeee--Eeecccc-------ccchHhHhCC----ceeehhhhhhhcCcceeEeecccccHH-H
Confidence 999998653 7889999999 7777743 1233445664 799999999999999999999999988 9
Q ss_pred HHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 849 VDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 849 i~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++-+.+.+...+.|.+...+|.++++..++ +.++..|+.+.+.|.+++
T Consensus 246 a~iln~~KaPYNiS~~~s~~AL~Als~~n~------kkme~~rdaiv~er~RL~ 293 (375)
T KOG0633|consen 246 AEILNRAKAPYNISVAGSVAALAALSDSNG------KKMEDVRDAIVRERERLF 293 (375)
T ss_pred HHHHHhccCCccccchhHHHHHHhcCcccc------hHHHHHHHHHHHHHHHHH
Confidence 999999999889999999999999964444 456666666555555443
No 107
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=6.2e-23 Score=229.24 Aligned_cols=265 Identities=20% Similarity=0.305 Sum_probs=210.1
Q ss_pred EEccCCCCCCCCcHHHHHHHHHH-H----HccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh
Q 043334 618 IHMDVDQSFLPIPSLVKAAIFES-F----ARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC 692 (903)
Q Consensus 618 IdLs~g~p~~~~p~~v~~al~~a-l----~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l 692 (903)
|||+.|.+++.+++.+...+.+. . ..|.+..|..++++.+++++...+|.+..++ ++++++|+++++..++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~t~a~~~~~~~~ 79 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPE-EIVVTNGAQEALSLLLRAL 79 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcc-eEEEecCcHHHHHHHHHHh
Confidence 57899999988877777666541 1 1245677899999999999998887655544 8999999999999999999
Q ss_pred ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 693 ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 693 ~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
.++||+|+++.|+|.++...++..|.+++.++++..+.+..+.+.++....++. +++++++|+ ||||.+++.+++.+|
T Consensus 80 ~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~v~i~~~~-~~tG~~~~~~~l~~l 157 (350)
T cd00609 80 LNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKT-KLLYLNNPN-NPTGAVLSEEELEEL 157 (350)
T ss_pred CCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccc-eEEEEECCC-CCCCcccCHHHHHHH
Confidence 999999999999999999999999999999999765443333366666665555 589999997 999999999999999
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
+++|+++|+++|+|++|+.+.+.+.... ....... .+.+++++|+||.++.+|.|+||+++++.++.+.+
T Consensus 158 ~~~~~~~~~~~ivD~a~~~~~~~~~~~~------~~~~~~~----~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~ 227 (350)
T cd00609 158 AELAKKHGILIISDEAYAELVYDGEPPP------ALALLDA----YERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERL 227 (350)
T ss_pred HHHHHhCCeEEEEecchhhceeCCcccc------cccCcCc----cCcEEEEeecccccCCcccceEEEecCHHHHHHHH
Confidence 9999999999999999988777655421 0111111 24789999999999989999999999984488888
Q ss_pred HhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 853 SSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 853 ~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
..... ..+++...|.++..+|. .. .++..++++.++++++.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~l~--~~-----~~~~~~~~~~~~~~~~~l~ 272 (350)
T cd00609 228 KKLLPYTTSGPSTLSQAAAAAALD--DG-----EEHLEELRERYRRRRDALL 272 (350)
T ss_pred HHHHHhcccCCChHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHHHH
Confidence 87655 47888999999998884 22 1455666666666666553
No 108
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.91 E-value=5.2e-23 Score=238.89 Aligned_cols=259 Identities=14% Similarity=0.109 Sum_probs=195.5
Q ss_pred hhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC--CCCCcH---HHHHHHHHHHH----ccCCCCCchHHHHHHHHH
Q 043334 590 EMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQS--FLPIPS---LVKAAIFESFA----RQNMSESEIDVTPSIQQY 660 (903)
Q Consensus 590 ~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p--~~~~p~---~v~~al~~al~----~y~~~~G~~~lr~ala~~ 660 (903)
|+..++++.+..+..... .++..+.++|+|++|+| |+.+|. .+.+++.+++. .|....|.++++++++++
T Consensus 12 r~~~v~~~~~~~~~~~~~-~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~ 90 (460)
T PRK13238 12 RIKMVEPIRLTTREERER-ALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDI 90 (460)
T ss_pred eeceeccccccCHHHHHH-HHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHH
Confidence 444555555544443211 12457889999999999 677765 57777777663 366778999999999888
Q ss_pred HHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCC------CCcc--
Q 043334 661 IKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESE------VGFK-- 732 (903)
Q Consensus 661 l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~------~~f~-- 732 (903)
+.. . ++++|+|+++++..++.++++||| |++++|.|..|...+...|++++.+++++. ++|.
T Consensus 91 ~~~------~---~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~ 160 (460)
T PRK13238 91 FGY------P---YTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGN 160 (460)
T ss_pred hCC------C---cEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCC
Confidence 742 2 699999999999999999999999 999999999999999999999999999642 3565
Q ss_pred cCHHHHHHHhhcC---CCcEEEEECCCCCCcc-cCCCHHHHHHHHHHHHhCCcEEEEecCC--CCCccCCC---CCCCCc
Q 043334 733 MTEKTLVTILETV---KKPWVYISGPTINPTG-LLYSNKEIENILTVCAKYGARVVIDTAF--SGLEFNYE---GWGGWD 803 (903)
Q Consensus 733 ld~~~L~~~l~~~---~~~~vil~~P~~NPTG-~v~s~eel~eI~~ia~k~~i~VI~DeaY--~~l~f~~~---~~s~~s 803 (903)
+|++.|++.++++ ..++|++++|+ |||| .++|.+++++|.++|++||++||+|+++ ....|... .....+
T Consensus 161 id~e~Le~~i~~~~~~~tk~Ivl~~p~-NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~s 239 (460)
T PRK13238 161 FDLEKLEALIEEVGAENVPFIVMTITN-NSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKS 239 (460)
T ss_pred cCHHHHHHHHhhcCCCceeEEEEecCC-CCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCC
Confidence 9999999999852 23599999998 9998 9999999999999999999999999966 33445321 111111
Q ss_pred hhhhhhhhccCCCCCCceEEEccCchhcccccceee------EEEeCcHHHHHHHHhCC----C---CCCCcHHHHHHHH
Q 043334 804 LEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG------FLVLNHPQLVDAFSSFP----G---LSKPHSTVRYAIK 870 (903)
Q Consensus 804 ~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG------~lv~~~~~li~~l~~~~----~---~~~~s~~~Q~aa~ 870 (903)
+ . +-++.++|++|++.++|||+| |++++++++++.++... + +.+.+...|.|++
T Consensus 240 i----~---------~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala 306 (460)
T PRK13238 240 I----K---------EIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALA 306 (460)
T ss_pred H----H---------HHhhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHH
Confidence 1 1 123456899999999999974 55666556888887763 2 3334555588888
Q ss_pred HHH
Q 043334 871 KLL 873 (903)
Q Consensus 871 ~~L 873 (903)
..|
T Consensus 307 ~~l 309 (460)
T PRK13238 307 VGL 309 (460)
T ss_pred hhH
Confidence 777
No 109
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.88 E-value=9.8e-21 Score=216.55 Aligned_cols=256 Identities=13% Similarity=0.113 Sum_probs=182.5
Q ss_pred CCCCCeEEccCCC-CCCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 612 TPNSGLIHMDVDQ-SFLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 612 ~~~~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
..|.++|+|+.|+ +++++++.+.+++.+.+..+.. ..|.+++++++++++++.+|.+ + +|++|+| ++
T Consensus 39 ~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~---~-~i~~tsG-~~ 113 (397)
T PRK06939 39 ADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE---D-AILYSSC-FD 113 (397)
T ss_pred cCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC---c-EEEEcCh-HH
Confidence 3678899999998 6788899999999888865321 2578899999999999998854 2 7999999 56
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc----CCCcEEEEECCCCCC
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET----VKKPWVYISGPTINP 759 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~----~~~~~vil~~P~~NP 759 (903)
++..++.++++|||.|++++|+|+.+...++..|++++.++. .|++.+++.+++ +++..++++.+.+||
T Consensus 114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~ 186 (397)
T PRK06939 114 ANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSM 186 (397)
T ss_pred HHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCC
Confidence 777788899999999999999999999999999999988865 367888877753 112233333333599
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
||... ++++|.++|+++|++||+||+|+...+.....+ ......-. .+.+++++||||.++ |+|+|
T Consensus 187 ~G~~~---~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~------~~~~~~~~---~~~~i~~~S~sK~~~--g~r~G 252 (397)
T PRK06939 187 DGDIA---PLPEICDLADKYDALVMVDDSHAVGFVGENGRG------TVEHFGVM---DRVDIITGTLGKALG--GASGG 252 (397)
T ss_pred CCCcC---CHHHHHHHHHHhCCEEEEECcccccCcCCCCCC------HHHHcCCC---CCCcEEEEECHHHhC--ccCce
Confidence 99864 489999999999999999999963222221110 01111111 135799999999984 67999
Q ss_pred EEEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 840 FLVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 840 ~lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|++++++ +++.+..... ....+...+.++..+++.. ....++++.+++|++.+.
T Consensus 253 ~v~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--------~~~~~~~~~~~~~~~~l~ 310 (397)
T PRK06939 253 YTAGRKE-VIDWLRQRSRPYLFSNSLAPAIVAASIKVLELL--------EESDELRDRLWENARYFR 310 (397)
T ss_pred EEEeCHH-HHHHHHHhCccccccCCCCHHHHHHHHHHHHHH--------hcCHHHHHHHHHHHHHHH
Confidence 9999987 8898876432 1222344455555555310 112355666777766654
No 110
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.88 E-value=1.4e-20 Score=212.11 Aligned_cols=255 Identities=13% Similarity=0.125 Sum_probs=184.4
Q ss_pred CCCCCeEEccCCCC-CCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 612 TPNSGLIHMDVDQS-FLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 612 ~~~~~~IdLs~g~p-~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
..|.++|||+.|+| .++.++.+.+++.+.+..|.. ..|..+....+++.+++++|.+ + .|++++|+.+
T Consensus 13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~---~-~i~~~~G~~~ 88 (360)
T TIGR00858 13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTE---A-ALLFSSGYLA 88 (360)
T ss_pred ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC---C-EEEECchHHH
Confidence 46788999999964 234668899999998876432 2455677777888888877742 3 7999999777
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC---CCcEEEEECCCCCCc
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV---KKPWVYISGPTINPT 760 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~---~~~~vil~~P~~NPT 760 (903)
.+. ++.+++++||.|++++|+|+.+...++..|++++.++. +|++.+++.++.. ...++++.+++ |||
T Consensus 89 ~~~-~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~~-~~~ 159 (360)
T TIGR00858 89 NVG-VISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGVF-SMD 159 (360)
T ss_pred HHH-HHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCCc-cCC
Confidence 665 56788899999999999999999999999999988764 5788898888653 23577777776 999
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
|...+ +++|.++|+++|++||+||+|....++....+ ... ...+.. .+++|+++||||+|+++| ||
T Consensus 160 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~---~~~-~~~~~~----~~~~i~i~s~sK~~~~~g---G~ 225 (360)
T TIGR00858 160 GDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRG---TLE-HFGLKP----EPVDIQVGTLSKALGSYG---AY 225 (360)
T ss_pred CCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCc---hHH-hcCCCc----cCCcEEEEechhhhhccC---cE
Confidence 98877 78899999999999999999986666543211 111 111111 257999999999999877 99
Q ss_pred EEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 841 LVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 841 lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++++ +++.+..... ..+.+...+.++..+++. - .....+++.++++++.+.
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--~------~~~~~~~~~~~~~~~~l~ 282 (360)
T TIGR00858 226 VAGSQA-LIDYLINRARTLIFSTALPPAVAAAALAALEL--I------QEEPWRREKLLALIARLR 282 (360)
T ss_pred EEcCHH-HHHHHHHhCccceecCCCCHHHHHHHHHHHHH--H------hhCHHHHHHHHHHHHHHH
Confidence 999877 8888865432 223444445555666631 1 122345566666666554
No 111
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=7.3e-21 Score=205.77 Aligned_cols=295 Identities=13% Similarity=0.099 Sum_probs=212.3
Q ss_pred cCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC--C---CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHH
Q 043334 593 GFSRSAISVLNSAELSITETPNSGLIHMDVDQS--F---LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 593 ~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p--~---~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~ 662 (903)
..+..++..+.++-. ..+.++.|||++|.- . .|.-+.|.++-...+.+ |-+..|.+.+++++++.+
T Consensus 7 ~~p~DpIlgL~e~f~---~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll- 82 (396)
T COG1448 7 AAPADPILGLKEAFK---ADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL- 82 (396)
T ss_pred cCCCCchhHHHHHHh---cCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh-
Confidence 345556777776543 267788999999952 2 22334455544443332 556789999999999887
Q ss_pred hhcCCC---CCCCCcE--EecCchHHHHHHHHHHhc--cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCH
Q 043334 663 SNFGFP---IDINAEF--IYADCSQSLFNKLVLCCI--LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTE 735 (903)
Q Consensus 663 ~~~G~~---~~pe~~I--~vt~Gs~~al~~ll~~l~--~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~ 735 (903)
+|.+ ...+ +| +-|.|++++|......+. .|..+|.+++|+|+++..++...|.++..+|..+..+-.+|.
T Consensus 83 --FG~d~~~l~~~-Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df 159 (396)
T COG1448 83 --FGADSPALAED-RVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDF 159 (396)
T ss_pred --cCCCcHHHHhh-hHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccH
Confidence 6643 1211 33 557899999998776653 355679999999999999999999999999987655555899
Q ss_pred HHHHHHhhcCCCcEEEEECCC-CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccC
Q 043334 736 KTLVTILETVKKPWVYISGPT-INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSS 814 (903)
Q Consensus 736 ~~L~~~l~~~~~~~vil~~P~-~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~ 814 (903)
+.+.+.++.-...-|++-+++ |||||.-++.++|++|+++.++.+.+.+.|-+|.++.-+-+. ..+.++-++. ..
T Consensus 160 ~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Glee-Da~~lR~~a~---~~ 235 (396)
T COG1448 160 DGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEE-DAYALRLFAE---VG 235 (396)
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHH-HHHHHHHHHH---hC
Confidence 998888876543445555555 999999999999999999999999999999999766543221 1122222222 21
Q ss_pred CCCCCceEEEccCchhcccccceeeE--EEeCcHHHHHHHHh----CC--CCCCCcHHHHHHHHHHHhcccccchhHHHH
Q 043334 815 TNSSFNVSLLGGLSLKMLTGALKFGF--LVLNHPQLVDAFSS----FP--GLSKPHSTVRYAIKKLLGLRERKARDLMNA 886 (903)
Q Consensus 815 ~~~~~~vI~l~S~SK~~g~~GlRiG~--lv~~~~~li~~l~~----~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~ 886 (903)
..+++..||||+||+.|-|+|. +++.+.+..+.+.. +. .+++|+...-..+...|. +......|++.
T Consensus 236 ----~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~-~p~Lra~W~~E 310 (396)
T COG1448 236 ----PELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILN-NPELRAEWEQE 310 (396)
T ss_pred ----CcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhC-CHHHHHHHHHH
Confidence 2489999999999999999995 44555544444432 22 288899999999999994 22223457788
Q ss_pred HHHHHHHHHHHHHHHhC
Q 043334 887 VAEHIRNLESRSKRLKE 903 (903)
Q Consensus 887 l~~~r~~y~~Rr~~l~e 903 (903)
+..+|.++.++|+.|++
T Consensus 311 l~~Mr~Ri~~mR~~lv~ 327 (396)
T COG1448 311 LEEMRQRILEMRQALVD 327 (396)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999988764
No 112
>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis]
Probab=99.87 E-value=1.6e-21 Score=211.95 Aligned_cols=181 Identities=29% Similarity=0.390 Sum_probs=144.1
Q ss_pred CcccCCcccCcchhHHHHHHhh-cCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc
Q 043334 1 MMVIPSIFIPEDWSFTFYEGLN-RHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL 79 (903)
Q Consensus 1 ~~~~p~vfiP~~w~~~~~~~L~-~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl 79 (903)
+.|.++|++||+.+..+.+.+. .... .+.+|||+|||||.+++.+++..+.++|+|+|+|+++++.|++|+..+++
T Consensus 83 ~~v~~~vliPr~dTe~Lve~~l~~~~~---~~~~ilDlGTGSG~iai~la~~~~~~~V~a~Dis~~Al~~A~~Na~~~~l 159 (280)
T COG2890 83 FKVDEGVLIPRPDTELLVEAALALLLQ---LDKRILDLGTGSGAIAIALAKEGPDAEVIAVDISPDALALARENAERNGL 159 (280)
T ss_pred eeeCCCceecCCchHHHHHHHHHhhhh---cCCcEEEecCChHHHHHHHHhhCcCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 3689999999999988888743 1111 11179999999999999999999889999999999999999999999986
Q ss_pred ccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccc
Q 043334 80 DEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGF 159 (903)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~ 159 (903)
.++.++++|+++.... +||+||+||||++.. ......++..+.| ..++.+
T Consensus 160 ----------------~~~~~~~~dlf~~~~~---~fDlIVsNPPYip~~-~~~~~~~~~~~EP---------~~Al~~- 209 (280)
T COG2890 160 ----------------VRVLVVQSDLFEPLRG---KFDLIVSNPPYIPAE-DPELLPEVVRYEP---------LLALVG- 209 (280)
T ss_pred ----------------ccEEEEeeecccccCC---ceeEEEeCCCCCCCc-ccccChhhhccCH---------HHHHcc-
Confidence 4788888888886543 899999999999877 3333333333332 334444
Q ss_pred ccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCC-CeEEEEEehh
Q 043334 160 VEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRG-FRVDKLWQTK 217 (903)
Q Consensus 160 v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~g-f~~~~~~~~~ 217 (903)
+.+|++.+++++.++.++|+|||.++++++..+.... ++++.+.| |..+....+.
T Consensus 210 --g~dGl~~~~~i~~~a~~~l~~~g~l~le~g~~q~~~v-~~~~~~~~~~~~v~~~~d~ 265 (280)
T COG2890 210 --GGDGLEVYRRILGEAPDILKPGGVLILEIGLTQGEAV-KALFEDTGFFEIVETLKDL 265 (280)
T ss_pred --CccHHHHHHHHHHhhHHHcCCCcEEEEEECCCcHHHH-HHHHHhcCCceEEEEEecC
Confidence 5699999999999999999999999999998877666 68999999 6655554443
No 113
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.87 E-value=9.1e-21 Score=217.49 Aligned_cols=218 Identities=17% Similarity=0.131 Sum_probs=174.6
Q ss_pred cCCCCCeEEccCCCC--CCCCcH---HHHHHHHHHHH----ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCch
Q 043334 611 ETPNSGLIHMDVDQS--FLPIPS---LVKAAIFESFA----RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCS 681 (903)
Q Consensus 611 ~~~~~~~IdLs~g~p--~~~~p~---~v~~al~~al~----~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs 681 (903)
+..|.+++.|..+++ |+.++. .+.++..+++. .|..+.|.++|++++++++. . . ++++|+|+
T Consensus 7 ~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~g----~--~---~vv~t~~G 77 (431)
T cd00617 7 KEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLFG----F--K---HIIPTHQG 77 (431)
T ss_pred HHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHHC----C--C---eEEEcCCH
Confidence 457889999999999 766553 45444445443 37778889999999988763 3 2 79999999
Q ss_pred HHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCC------c--ccCHHHHHHHhhcC---CCcEE
Q 043334 682 QSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVG------F--KMTEKTLVTILETV---KKPWV 750 (903)
Q Consensus 682 ~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~------f--~ld~~~L~~~l~~~---~~~~v 750 (903)
++++..++.++++|||.| +++|+|..+...+...|++++.++++++.+ | ++|+++|+++++++ ..++|
T Consensus 78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I 156 (431)
T cd00617 78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI 156 (431)
T ss_pred HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence 999999999999999987 699999999999999999999999975432 4 49999999999865 13589
Q ss_pred EEECCCCCCc-ccCCCHHHHHHHHHHHHhCCcEEEEecCCC--CCccC-----CCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 751 YISGPTINPT-GLLYSNKEIENILTVCAKYGARVVIDTAFS--GLEFN-----YEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 751 il~~P~~NPT-G~v~s~eel~eI~~ia~k~~i~VI~DeaY~--~l~f~-----~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++|+ ||+ |.++|.+++++|.++|++||++||+|++.. ...|. +... .+ +. +.++
T Consensus 157 ~v~~p~-N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~--~s----i~---------ei~~ 220 (431)
T cd00617 157 VLTITN-NTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRD--KS----IA---------EIAR 220 (431)
T ss_pred EEECCc-CCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccC--CC----HH---------HHHH
Confidence 999998 998 999999999999999999999999999942 22332 2111 11 11 2456
Q ss_pred EEccCchhcccccce------eeEEEeCcHHHHHHHHh
Q 043334 823 LLGGLSLKMLTGALK------FGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 823 ~l~S~SK~~g~~GlR------iG~lv~~~~~li~~l~~ 854 (903)
.++|+||.+.|+||| .||+++++++++++++.
T Consensus 221 e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~ 258 (431)
T cd00617 221 EMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQ 258 (431)
T ss_pred HhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHH
Confidence 789999999999999 56999998669998875
No 114
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.86 E-value=6.2e-20 Score=210.07 Aligned_cols=253 Identities=14% Similarity=0.118 Sum_probs=181.0
Q ss_pred CCCCeEEccCCCC-CCCCcHHHHHHHHHHHHccCC----CC---CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNSGLIHMDVDQS-FLPIPSLVKAAIFESFARQNM----SE---SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~~~IdLs~g~p-~~~~p~~v~~al~~al~~y~~----~~---G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.+.++|+|+.|++ .+++++.+++++.+++.+++. +. |..+....+++.+++++|.+ ++++++|++++
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~-----~~ii~~~~~~a 110 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTE-----DTILYASCFDA 110 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-----cEEEECchHHH
Confidence 5678999999985 788899999999998876422 22 65555667777777777752 46666788899
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc------CCCcEEEEECCCCC
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET------VKKPWVYISGPTIN 758 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~------~~~~~vil~~P~~N 758 (903)
+..++.+++++||.|++++|+|+.+...++..+++.+.++. +|++.+++.+++ ++ ++|++.+++ |
T Consensus 111 ~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~-~~v~~~~v~-~ 181 (393)
T TIGR01822 111 NGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEARAAGARH-RLIATDGVF-S 181 (393)
T ss_pred HHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhhcCCCc-eEEEEeCCc-c
Confidence 99999999999999999999999999999988888765532 688999888874 33 467777776 9
Q ss_pred CcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccccee
Q 043334 759 PTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF 838 (903)
Q Consensus 759 PTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi 838 (903)
|||.+.+ +++|+++|+++|++||+||+|+...++....+ .....+-. .+.+++++|+||.+ +|+|+
T Consensus 182 ~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~------~~~~~~~~---~~~di~~~s~sK~l--~g~r~ 247 (393)
T TIGR01822 182 MDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRG------SHELCGVM---GRVDIITGTLGKAL--GGASG 247 (393)
T ss_pred CCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCc------hHHhcCCC---CCCeEEEEEChHHh--hCCCc
Confidence 9999987 88999999999999999999963332222110 11111111 13679999999986 48999
Q ss_pred eEEEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 839 GFLVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 839 G~lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
||++++++ +++.+..... ....+...+.++.++|+.. +..+++++.++++++++.
T Consensus 248 G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--------~~~~~~~~~~~~~~~~l~ 306 (393)
T TIGR01822 248 GFTTARKE-VVELLRQRSRPYLFSNSLPPAVVGASIKVLEML--------EASNELRDRLWANTRYFR 306 (393)
T ss_pred EEEEeCHH-HHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--------hcCHHHHHHHHHHHHHHH
Confidence 99999877 8888876432 2223444455566666311 123345556666665553
No 115
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=6.7e-21 Score=204.24 Aligned_cols=257 Identities=13% Similarity=0.182 Sum_probs=200.0
Q ss_pred ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc-CCCeEEEcCCCcHHHHHHHHHcCCEEE
Q 043334 643 RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL-EGGTLCFPAGSNGNYVSAARFLKANIV 721 (903)
Q Consensus 643 ~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~-pGD~Vlv~~P~y~~~~~~~~~~G~~vv 721 (903)
.|..++|.+-.|+.+++++.++-|.+.+|+ +|++|+|++.++..++..++. +.+.|++|-|.||.|...+..+|+..+
T Consensus 108 aYS~SqGv~~vR~~VA~~I~rRDG~p~~p~-dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v 186 (475)
T KOG0258|consen 108 AYSDSQGVPGVRKHVAEFIERRDGIPADPE-DIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQV 186 (475)
T ss_pred ccccccCChhHHHHHHHHHHhccCCCCCHH-HeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCccc
Confidence 377789999999999999999999889988 999999999999999888764 568899999999999999999999999
Q ss_pred EecCCCCCCcccCHHHHHHHhhc----CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCC
Q 043334 722 NIPTESEVGFKMTEKTLVTILET----VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYE 797 (903)
Q Consensus 722 ~v~~~~~~~f~ld~~~L~~~l~~----~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~ 797 (903)
++-++++++|.+|.++|++.+.+ -+++++++.||. ||||.++|.+-+++|+.+|.+++++++.||+|.+-+|...
T Consensus 187 ~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPG-NPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~ 265 (475)
T KOG0258|consen 187 PYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPG-NPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTG 265 (475)
T ss_pred ceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCC-CccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCC
Confidence 99999999999999999887654 245689999999 9999999999999999999999999999999999888765
Q ss_pred CCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceeeEEEeC--cHHHHHHHHhCCC-CCCCcHHHHHHHHHHH
Q 043334 798 GWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGFLVLN--HPQLVDAFSSFPG-LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 798 ~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~~--~~~li~~l~~~~~-~~~~s~~~Q~aa~~~L 873 (903)
. .|+|....+..+......+-..+.++|.||.+ |=.|.|-||.-.- ..+..+.+.++.. ..+++...|...-...
T Consensus 266 s-kFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~V 344 (475)
T KOG0258|consen 266 S-KFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVV 344 (475)
T ss_pred c-chHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceec
Confidence 2 23454444444442211123578899999998 4489999987642 2236666666655 6677777787666555
Q ss_pred hccccc---chhHHHHHHHHHHHHHHHHHHHh
Q 043334 874 GLRERK---ARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 874 ~~~~~~---~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.-.... .+.+....+.+...+++|.+.+.
T Consensus 345 nPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~ 376 (475)
T KOG0258|consen 345 NPPKPGDPSYDLFSSEKDGILSSLRSRAKLTE 376 (475)
T ss_pred CCCCCCCcchhhhhhhhHhHHHHHHHHhHHHH
Confidence 211111 22233445556666666666553
No 116
>PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional
Probab=99.86 E-value=7.6e-21 Score=213.01 Aligned_cols=182 Identities=20% Similarity=0.230 Sum_probs=144.4
Q ss_pred cccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccccc
Q 043334 2 MVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDE 81 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~ 81 (903)
.|.|++|+||..+..+.+.+..... ++.+|||+|||+|.+++.+++..++.+|+|+|+|++|++.|++|+..++.
T Consensus 226 ~V~p~vLIPRpeTE~LVe~aL~~l~---~~~rVLDLGcGSG~IaiaLA~~~p~a~VtAVDiS~~ALe~AreNa~~~g~-- 300 (423)
T PRK14966 226 AVNPNVLIPRPETEHLVEAVLARLP---ENGRVWDLGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA-- 300 (423)
T ss_pred EeCCCccCCCccHHHHHHHhhhccC---CCCEEEEEeChhhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--
Confidence 5789999999888877777554322 45699999999999999999888889999999999999999999987754
Q ss_pred CCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccccc
Q 043334 82 KGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVE 161 (903)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~ 161 (903)
+++++++|+.+......++||+|++||||+...+...+...+ .+ ++..++.+
T Consensus 301 ---------------rV~fi~gDl~e~~l~~~~~FDLIVSNPPYI~~~e~~l~~~~v-~~---------EP~~AL~g--- 352 (423)
T PRK14966 301 ---------------RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHLLQGDL-RF---------EPQIALTD--- 352 (423)
T ss_pred ---------------cEEEEEcchhccccccCCCccEEEECCCCCCcchhhhcchhh-hc---------CHHHHhhC---
Confidence 799999999765322223799999999999766543222222 22 34445554
Q ss_pred ccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 162 DQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 162 ~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
+.+|++.++++++.+.++|+|||.++++++..+.... ++++++.||..+++..+.
T Consensus 353 G~dGL~~yr~Ii~~a~~~LkpgG~lilEiG~~Q~e~V-~~ll~~~Gf~~v~v~kDl 407 (423)
T PRK14966 353 FSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAV-RGVLAENGFSGVETLPDL 407 (423)
T ss_pred CCchHHHHHHHHHHHHHhcCCCcEEEEEECccHHHHH-HHHHHHCCCcEEEEEEcC
Confidence 7899999999999999999999999999988655544 778999999877775444
No 117
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.5e-20 Score=193.56 Aligned_cols=265 Identities=16% Similarity=0.179 Sum_probs=189.7
Q ss_pred CCCeEEccCCCCCCCC--cHHHHHHHHH---------HHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH
Q 043334 614 NSGLIHMDVDQSFLPI--PSLVKAAIFE---------SFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ 682 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~--p~~v~~al~~---------al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~ 682 (903)
.++.|.|+.|+|..-+ .....+...+ ++-+|..++|...+.+++++.+++.||...+++ +|.+|+|++
T Consensus 29 t~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~-NIalTnGSQ 107 (417)
T COG3977 29 TPGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQ-NIALTNGSQ 107 (417)
T ss_pred CCCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccc-eeeecCCcc
Confidence 3459999999886321 1112222222 233477789999999999999999999998866 999999999
Q ss_pred HHHHHHHHHhcc---CCC--eEEEc-CCCcHHHHHHHHHcCCEEEE---ecCCCCCC--cccCHHHHHHHhhcCCCcEEE
Q 043334 683 SLFNKLVLCCIL---EGG--TLCFP-AGSNGNYVSAARFLKANIVN---IPTESEVG--FKMTEKTLVTILETVKKPWVY 751 (903)
Q Consensus 683 ~al~~ll~~l~~---pGD--~Vlv~-~P~y~~~~~~~~~~G~~vv~---v~~~~~~~--f~ld~~~L~~~l~~~~~~~vi 751 (903)
.++..++..+.. .|+ .|+.| .|.|.+|..+..--..=|.. +.+.+.+. |.+|.+++.- .+.+ .+|+
T Consensus 108 s~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i--~e~~-g~ic 184 (417)
T COG3977 108 SAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GEST-GAIC 184 (417)
T ss_pred chHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHHHccc--cccc-ceEE
Confidence 999998887743 243 45444 88888887654221111111 12222333 5677777753 3444 5899
Q ss_pred EECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 752 ISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 752 l~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
++-|+ ||||.|++.+|+.+|-++|++||+.+|+|.+|+ .-|.+--. ....... ++|+|.+.|+|| .
T Consensus 185 ~SRPt-NPTGNVlTdeE~~kldalA~~~giPliIDnAYg-~PFP~iif---------sd~~~~w--~~NiilC~SLSK-~ 250 (417)
T COG3977 185 VSRPT-NPTGNVLTDEELAKLDALARQHGIPLIIDNAYG-VPFPGIIF---------SDATPLW--NENIILCMSLSK-L 250 (417)
T ss_pred ecCCC-CCCCCcccHHHHHHHHHHhhhcCCcEEEecccC-CCCCceec---------ccccccC--CCCEEEEeehhh-c
Confidence 99999 999999999999999999999999999999996 23332111 1111111 258999999999 7
Q ss_pred ccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 832 LTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 832 g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
|+||.|+|.++++++ +++++.++.. +..++.+.|.++..+++ ++. -++-.-+-+|-.|+.|.+..
T Consensus 251 GLPG~R~GIiIane~-viqaitnmn~iisLap~~~G~Aia~~mie--~gd--l~rlseqVIrPFY~~~~q~~ 317 (417)
T COG3977 251 GLPGSRCGIIIANEK-VIQAITNMNGIISLAPGRMGPAIAAEMIE--SGD--LLRLSEQVIRPFYRNRVQTT 317 (417)
T ss_pred CCCCcceeEEEccHH-HHHHHHhccceeeecCCCccHHHHHHHhh--cch--HHHHHHHhhhHHHHHHHHHH
Confidence 999999999999998 9999999987 77888999999999994 441 12222345666777776654
No 118
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.85 E-value=1.3e-19 Score=206.65 Aligned_cols=234 Identities=12% Similarity=0.116 Sum_probs=177.7
Q ss_pred CCCCCeEEccCCC-CCCCCcHHHHHHHHHHHHccC-------CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 612 TPNSGLIHMDVDQ-SFLPIPSLVKAAIFESFARQN-------MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 612 ~~~~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~-------~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
..|++++||+.|+ +.+++++.+.+++.+.+.++. ...|.+++++++++++++.+|.+ + .|++++|+++
T Consensus 30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~---~-~i~~~sG~~a 105 (385)
T TIGR01825 30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTE---A-ALVFQSGFNT 105 (385)
T ss_pred ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCC---c-EEEECcHHHH
Confidence 4678899999987 678788899999988876542 24578899999999999988853 2 6999999665
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC---CCcEEEEECCCCCCc
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV---KKPWVYISGPTINPT 760 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~---~~~~vil~~P~~NPT 760 (903)
.+ .++.+++++||.|++++|+|+.+...++..|++++.++ .+|++.+++.+.+. +.++++++++. |||
T Consensus 106 ~~-~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~-~~t 176 (385)
T TIGR01825 106 NQ-GVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVF-SMD 176 (385)
T ss_pred HH-HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCC-cCC
Confidence 55 67788899999999999999999888888899887764 26788888776542 22466666665 999
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
|.+.+ +++|.++|+++|+++|+||+|+.+.++....+ ....++-.+ +++++++||||.++++| ||
T Consensus 177 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~------~~~~~~~~~---~~~i~~~s~sK~~~~~g---G~ 241 (385)
T TIGR01825 177 GDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRG------TVHHFGLED---KVDIQVGTLSKAIGVVG---GY 241 (385)
T ss_pred CCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCc------cHhhcCCCc---CCcEEEEeccHHhhcCC---CE
Confidence 99988 78899999999999999999977666532210 011111111 47999999999998766 99
Q ss_pred EEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 841 LVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 841 lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
++++++ +++.+..... ....+.+.|.++.++++
T Consensus 242 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 278 (385)
T TIGR01825 242 AAGHKE-LIEYLKNRARPFLFSTAQPPAVVAALAAAVD 278 (385)
T ss_pred EecCHH-HHHHHHHhCccccccCCCCHHHHHHHHHHHH
Confidence 998877 8888876532 22345677878877774
No 119
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.85 E-value=1.1e-19 Score=204.37 Aligned_cols=230 Identities=13% Similarity=0.074 Sum_probs=176.1
Q ss_pred CCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEc---C
Q 043334 627 LPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFP---A 703 (903)
Q Consensus 627 ~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~---~ 703 (903)
+...+.++++..+++.+|+ |..++.+.+++.+++++|.+.+ ++++++|+.+++..++.++++|||.|+++ .
T Consensus 32 l~~~~~~~~~~~~~~~~~~---g~~~~~~~Le~~lA~~~g~~~e---~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~ 105 (346)
T TIGR03576 32 LAGGFKIDEEDLELLETYV---GPAIFEEKVQELGREHLGGPEE---KILVFNRTSSAILATILALEPPGRKVVHYLPEK 105 (346)
T ss_pred CCCChhHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHcCCCcc---eEEEECCHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3456788888888888874 7889999999999999998644 89999999999999999999999999975 5
Q ss_pred CCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEE
Q 043334 704 GSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARV 783 (903)
Q Consensus 704 P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~V 783 (903)
|+|+.|...++..|++++.+ .+++.++. .+++ ++|++ +++ ||+|.+++.+++++|+++|+++|++|
T Consensus 106 p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~-~lIii-tg~-s~~G~v~~~~~L~~i~~la~~~~~~l 171 (346)
T TIGR03576 106 PAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGT-SLVVI-TGS-TMDLKVVSEEDLKRVIKQAKSKEAIV 171 (346)
T ss_pred CCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCc-eEEEE-ECC-CCCCcccCHHHHHHHHHHHHHcCCEE
Confidence 79999999999999986432 13444432 2334 36666 566 89999999999999999999999999
Q ss_pred EEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCC
Q 043334 784 VIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKP 861 (903)
Q Consensus 784 I~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~ 861 (903)
|+||+|+...+..... . +.. .. + ..++++|||| +++|+|+||++++++ +++.+.+... ..+.
T Consensus 172 ivDEAy~~~~~~~~~~--~---~~~-~~-~------~divv~s~SK--alaG~r~G~v~~~~~-li~~l~~~~~~~~~s~ 235 (346)
T TIGR03576 172 LVDDASGARVRRLYGQ--P---PAL-DL-G------ADLVVTSTDK--LMDGPRGGLLAGRKE-LVDKIKSVGEQFGLEA 235 (346)
T ss_pred EEECCccccccccCCC--C---CHH-Hc-C------CcEEEeccch--hccccceEEEEeCHH-HHHHHHHhhcCcccCc
Confidence 9999998654321110 0 111 11 1 2367789999 578999999999987 9999998765 3346
Q ss_pred cHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 862 HSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 862 s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
+++.|.++..+|+ .. ..+.+++.+++|++++
T Consensus 236 ~~~~~~aa~~aL~--~~-------~~~~~~~~l~~r~~~~ 266 (346)
T TIGR03576 236 QAPLLAAVVRALE--EF-------ELSRIRDAFKRKEEVY 266 (346)
T ss_pred cHHHHHHHHHHHh--hc-------cHHHHHHHHHHHHHHH
Confidence 8889999999994 11 1234566777776665
No 120
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific. Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.
Probab=99.84 E-value=3.8e-20 Score=202.21 Aligned_cols=179 Identities=22% Similarity=0.290 Sum_probs=139.4
Q ss_pred cccCCcccCcchhHHHHHH-hhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccc
Q 043334 2 MVIPSIFIPEDWSFTFYEG-LNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALD 80 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~-L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~ 80 (903)
.|.|+||+|+..+..+++. +..... ..++.+|||+|||+|.+++.+++..++.+|+|+|+|+.+++.|++|+..+++
T Consensus 93 ~v~~~vlipr~~te~lv~~~l~~~~~-~~~~~~vLDlG~GsG~i~~~la~~~~~~~v~avDis~~al~~A~~n~~~~~~- 170 (284)
T TIGR03533 93 YVDERVLIPRSPIAELIEDGFAPWLE-PEPVKRILDLCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEINIERHGL- 170 (284)
T ss_pred EECCCCccCCCchHHHHHHHHHHHhc-cCCCCEEEEEeCchhHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-
Confidence 5889999999766555444 221111 1135689999999999999999998889999999999999999999998886
Q ss_pred cCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccc
Q 043334 81 EKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFV 160 (903)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v 160 (903)
.++++++++|+.+.... .+||+|++||||+.......+..++. + .+..++.+
T Consensus 171 --------------~~~i~~~~~D~~~~~~~--~~fD~Iv~NPPy~~~~~~~~l~~~~~-~---------ep~~al~g-- 222 (284)
T TIGR03533 171 --------------EDRVTLIQSDLFAALPG--RKYDLIVSNPPYVDAEDMADLPAEYH-H---------EPELALAS-- 222 (284)
T ss_pred --------------CCcEEEEECchhhccCC--CCccEEEECCCCCCccchhhCCHhhh-c---------CHHHHhcC--
Confidence 25799999999775432 37999999999997766544444332 2 23334544
Q ss_pred cccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 161 EDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 161 ~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
+.+|++.++++++++.++|+|||+++++++... ..+++++.+.||.....
T Consensus 223 -g~dGl~~~~~il~~a~~~L~~gG~l~~e~g~~~--~~v~~~~~~~~~~~~~~ 272 (284)
T TIGR03533 223 -GEDGLDLVRRILAEAADHLNENGVLVVEVGNSM--EALEEAYPDVPFTWLEF 272 (284)
T ss_pred -CCcHHHHHHHHHHHHHHhcCCCCEEEEEECcCH--HHHHHHHHhCCCceeee
Confidence 789999999999999999999999999998743 56678899888876443
No 121
>TIGR00536 hemK_fam HemK family putative methylases. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain.
Probab=99.84 E-value=3.1e-20 Score=203.31 Aligned_cols=183 Identities=22% Similarity=0.302 Sum_probs=140.9
Q ss_pred cccCCcccCcchhHHHHHHhh-cCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccc
Q 043334 2 MVIPSIFIPEDWSFTFYEGLN-RHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALD 80 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~L~-~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~ 80 (903)
.|.|+||+||..+..+.+... .... ..++.+|||+|||+|.+++.++..+++.+|+|+|+|+++++.|++|+..+++
T Consensus 86 ~v~~~vliPr~ete~lv~~~l~~~~~-~~~~~~vLDlG~GsG~i~l~la~~~~~~~v~avDis~~al~~a~~n~~~~~~- 163 (284)
T TIGR00536 86 FVNEHVLIPRPETEELVEKALASLIS-QNPILHILDLGTGSGCIALALAYEFPNAEVIAVDISPDALAVAEENAEKNQL- 163 (284)
T ss_pred EECCCCcCCCCccHHHHHHHHHHhhh-cCCCCEEEEEeccHhHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-
Confidence 588999999966665555532 2211 1123689999999999999999998888999999999999999999988876
Q ss_pred cCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccc
Q 043334 81 EKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFV 160 (903)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v 160 (903)
..+++++++|+.+..... +||+|++||||+...+...+ ..+..+ ++..++.+
T Consensus 164 --------------~~~v~~~~~d~~~~~~~~--~fDlIvsNPPyi~~~~~~~~-~~~~~~---------eP~~AL~g-- 215 (284)
T TIGR00536 164 --------------EHRVEFIQSNLFEPLAGQ--KIDIIVSNPPYIDEEDLADL-PNVVRF---------EPLLALVG-- 215 (284)
T ss_pred --------------CCcEEEEECchhccCcCC--CccEEEECCCCCCcchhhcC-Cccccc---------CcHHHhcC--
Confidence 246999999998764332 79999999999977654333 222222 34455655
Q ss_pred cccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHH-HCCCeEEEEEeh
Q 043334 161 EDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFE-RRGFRVDKLWQT 216 (903)
Q Consensus 161 ~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~-~~gf~~~~~~~~ 216 (903)
+.+|++.++++++++.++|+|||.++++++..+.... .+++. ..||..+...++
T Consensus 216 -g~dgl~~~~~ii~~a~~~L~~gG~l~~e~g~~q~~~~-~~~~~~~~~~~~~~~~~D 270 (284)
T TIGR00536 216 -GDDGLNILRQIIELAPDYLKPNGFLVCEIGNWQQKSL-KELLRIKFTWYDVENGRD 270 (284)
T ss_pred -CCcHHHHHHHHHHHHHHhccCCCEEEEEECccHHHHH-HHHHHhcCCCceeEEecC
Confidence 7899999999999999999999999999998766555 56776 468877666444
No 122
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.84 E-value=4.9e-19 Score=201.58 Aligned_cols=235 Identities=13% Similarity=0.150 Sum_probs=172.0
Q ss_pred CCCCCeEEccCCCC-CCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 612 TPNSGLIHMDVDQS-FLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 612 ~~~~~~IdLs~g~p-~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
..|.+.|||+.|++ .+.+++.+.+++.+.+..|.. ..|..++++.+++.+++++|. ++ .|++++|+.+
T Consensus 36 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~---~~-~i~~~~g~~~ 111 (385)
T PRK05958 36 VDGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA---ER-ALLFSSGYAA 111 (385)
T ss_pred eCCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC---Cc-EEEECcHHHH
Confidence 47889999999875 345678899999998876532 245677888899999998873 22 6777776655
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC--CCcEEEEECCCCCCcc
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV--KKPWVYISGPTINPTG 761 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~--~~~~vil~~P~~NPTG 761 (903)
.+ .++..++++||.|++++|+|+.+...++..|++++.++. .|++.+++.+++. ++.++++.+++ ||||
T Consensus 112 ~~-~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~-~~~G 182 (385)
T PRK05958 112 NL-AVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVF-SMDG 182 (385)
T ss_pred HH-HHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecc-cCCC
Confidence 54 567788999999999999999999999999999998875 3688898888753 33355555565 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL 841 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l 841 (903)
...+ +++|.++|+++|++||+||+|+...++...... .. ...+... .++|+++||||.+|++| ||+
T Consensus 183 ~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~---~~-~~~~~~~----~~~i~~~s~sK~~~~~G---g~~ 248 (385)
T PRK05958 183 DLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGL---AA-EAGLAGE----PDVILVGTLGKALGSSG---AAV 248 (385)
T ss_pred CcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCch---HH-hhCCCCC----CceEEEEechhhcccCC---cEE
Confidence 8876 888999999999999999999765554322110 01 1112222 47899999999998877 999
Q ss_pred EeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 842 VLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 842 v~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
+++++ +++.+.+... ..+.+...+.++..+|+
T Consensus 249 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~ 284 (385)
T PRK05958 249 LGSET-LIDYLINRARPFIFTTALPPAQAAAARAALR 284 (385)
T ss_pred EcCHH-HHHHHHHhCccceecCCCCHHHHHHHHHHHH
Confidence 98876 8887764432 22344444455556663
No 123
>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed
Probab=99.84 E-value=3.3e-20 Score=217.36 Aligned_cols=187 Identities=21% Similarity=0.298 Sum_probs=145.7
Q ss_pred CcccCCcccCcchhHHHHHHhh-cCCC--------------------C--CCCCCeEEEeCCccCHHHHHHHHHhCCCEE
Q 043334 1 MMVIPSIFIPEDWSFTFYEGLN-RHPD--------------------S--ILKDKTVAELGCGNGWITIAIAEKWLPSKV 57 (903)
Q Consensus 1 ~~~~p~vfiP~~w~~~~~~~L~-~~~~--------------------~--~~~~~~VLDlGCGtG~lsi~la~~~~~~~V 57 (903)
+.|.|+|+|||..+..+.+... .+.. . ..++.+|||+|||+|.+++.++...++.+|
T Consensus 86 f~V~~~VLIPRpeTE~Lve~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLDlG~GsG~iai~la~~~p~~~v 165 (506)
T PRK01544 86 FIVNKHVLIPRSDTEVLVDVVFQCHSRESGNPEKKQLNPCFRGNDISSNCNDKFLNILELGTGSGCIAISLLCELPNANV 165 (506)
T ss_pred EEeCCCcccCCCcHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCEEEEccCchhHHHHHHHHHCCCCeE
Confidence 4689999999976666655432 2110 0 113468999999999999999998888999
Q ss_pred EEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhH
Q 043334 58 YGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKI 137 (903)
Q Consensus 58 ~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~ 137 (903)
+|+|+|+.+++.|++|+..+++ .++++++++|+.+.... ++||+|++||||+.......+..+
T Consensus 166 ~avDis~~al~~A~~N~~~~~l---------------~~~v~~~~~D~~~~~~~--~~fDlIvsNPPYi~~~~~~~l~~~ 228 (506)
T PRK01544 166 IATDISLDAIEVAKSNAIKYEV---------------TDRIQIIHSNWFENIEK--QKFDFIVSNPPYISHSEKSEMAIE 228 (506)
T ss_pred EEEECCHHHHHHHHHHHHHcCC---------------ccceeeeecchhhhCcC--CCccEEEECCCCCCchhhhhcCch
Confidence 9999999999999999988876 25799999998775432 379999999999987665444444
Q ss_pred HhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 138 ITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 138 ~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
+..+ .+..++++ +.+|++.++++++++.++|+|||.++++++..+.... .+++.+.||..+.++.+.
T Consensus 229 v~~~---------EP~~AL~g---g~dGl~~~~~il~~a~~~L~~gG~l~lEig~~q~~~v-~~~~~~~g~~~~~~~~D~ 295 (506)
T PRK01544 229 TINY---------EPSIALFA---EEDGLQAYFIIAENAKQFLKPNGKIILEIGFKQEEAV-TQIFLDHGYNIESVYKDL 295 (506)
T ss_pred hhcc---------CcHHHhcC---CccHHHHHHHHHHHHHHhccCCCEEEEEECCchHHHH-HHHHHhcCCCceEEEecC
Confidence 4433 23345554 7899999999999999999999999999987765544 678888999877775444
No 124
>TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific. This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown.
Probab=99.83 E-value=8.7e-20 Score=195.85 Aligned_cols=181 Identities=20% Similarity=0.260 Sum_probs=140.3
Q ss_pred CcccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccc
Q 043334 1 MMVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALD 80 (903)
Q Consensus 1 ~~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~ 80 (903)
+.+.|++|+|+..+..+.+...........+.+|||+|||+|.+++.+++..++.+|+|+|+|+.|++.|++|+..++
T Consensus 57 ~~v~~~vf~pr~~Te~Lv~~~l~~~~~~~~~~~vLDlg~GsG~i~l~la~~~~~~~v~~vDis~~al~~A~~N~~~~~-- 134 (251)
T TIGR03704 57 IAVDPGVFVPRRRTEFLVDEAAALARPRSGTLVVVDLCCGSGAVGAALAAALDGIELHAADIDPAAVRCARRNLADAG-- 134 (251)
T ss_pred EEECCCCcCCCccHHHHHHHHHHhhcccCCCCEEEEecCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--
Confidence 357899999997777666664332211123458999999999999999998888899999999999999999997653
Q ss_pred cCCCCcchhhhcccCCcEEEEEccccccccC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccc
Q 043334 81 EKGQPIYDAEKKTLLDRVEFHESDLLAYCRD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGF 159 (903)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~ 159 (903)
++++++|+.+.... ..++||+|++||||+.......+..++..+. +..++.+
T Consensus 135 -----------------~~~~~~D~~~~l~~~~~~~fDlVv~NPPy~~~~~~~~~~~e~~~~e---------p~~al~g- 187 (251)
T TIGR03704 135 -----------------GTVHEGDLYDALPTALRGRVDILAANAPYVPTDAIALMPPEARDHE---------PRVALDG- 187 (251)
T ss_pred -----------------CEEEEeechhhcchhcCCCEeEEEECCCCCCchhhhcCCHHHHhCC---------CHHHhcC-
Confidence 36789998775432 1237999999999998766655555554332 3335544
Q ss_pred ccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 160 VEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 160 v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
+.+|++.++++++.+.++|+|||.++++++..+... +..++++.||.....
T Consensus 188 --g~dgl~~~~~i~~~a~~~L~~gG~l~l~~~~~~~~~-v~~~l~~~g~~~~~~ 238 (251)
T TIGR03704 188 --GADGLDVLRRVAAGAPDWLAPGGHLLVETSERQAPL-AVEAFARAGLIARVA 238 (251)
T ss_pred --CCcHHHHHHHHHHHHHHhcCCCCEEEEEECcchHHH-HHHHHHHCCCCceee
Confidence 788999999999999999999999999999876654 467889999887655
No 125
>PLN02242 methionine gamma-lyase
Probab=99.83 E-value=1.6e-19 Score=207.68 Aligned_cols=207 Identities=14% Similarity=0.115 Sum_probs=160.0
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH-----HHcCCEEEEec
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA-----RFLKANIVNIP 724 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~-----~~~G~~vv~v~ 724 (903)
..+..+++++.++..+|.+ .+++++|+++++..++.+++++||+|+++.|.|+.+...+ +..|++++.++
T Consensus 74 ~~Pt~~~LE~~lA~l~g~~-----~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGTE-----AAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred CChhHHHHHHHHHHHhCCC-----eEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 3455778888898888764 4667888899999999999999999999999999887665 35788888776
Q ss_pred CCCCCCcccCHHHHHHHhhcC-CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCc
Q 043334 725 TESEVGFKMTEKTLVTILETV-KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWD 803 (903)
Q Consensus 725 ~~~~~~f~ld~~~L~~~l~~~-~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s 803 (903)
. .|++.++++++++ + ++|++++|+ ||||.+++ +++|+++|+++|++||+|++|..+.++..
T Consensus 149 ~-------~d~e~l~~~i~~~~t-klV~lesp~-NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~~------ 210 (418)
T PLN02242 149 I-------TDLEAVKKAVVPGKT-KVLYFESIS-NPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSPA------ 210 (418)
T ss_pred C-------CCHHHHHHhcCcCCC-EEEEEecCC-CCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCHH------
Confidence 5 2789999999874 5 599999998 99999986 88999999999999999999976544211
Q ss_pred hhhhhhhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHhcccc
Q 043334 804 LEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLGLRER 878 (903)
Q Consensus 804 ~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~~~~~ 878 (903)
. + +..|+++||||.++++|+|+ ||++++++ +++.+.+... ..+.+...|.++..++.+.
T Consensus 211 -----~-~-------g~divv~S~SK~l~g~g~~~gG~iv~~~~-li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~-- 274 (418)
T PLN02242 211 -----R-L-------GADVVVHSISKFISGGADIIAGAVCGPAE-LVNSMMDLHHGALMLLGPTMNPKVAFELSERLP-- 274 (418)
T ss_pred -----H-c-------CCcEEEEeCccccCCCCCceEEEEEcCHH-HHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC--
Confidence 1 1 25689999999999999985 89998877 8888886632 4566677788887776321
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHh
Q 043334 879 KARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 879 ~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+....+.+++|++.+.
T Consensus 275 -------tl~~r~~~~~~~a~~la 291 (418)
T PLN02242 275 -------HLSLRMKEHCRRAMEYA 291 (418)
T ss_pred -------cHHHHHHHHHHHHHHHH
Confidence 22334445666665553
No 126
>PLN02822 serine palmitoyltransferase
Probab=99.83 E-value=7.4e-19 Score=205.80 Aligned_cols=261 Identities=13% Similarity=0.122 Sum_probs=189.0
Q ss_pred CCCCeEEccCCC-CCCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNSGLIHMDVDQ-SFLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.|.+.+||+.++ +.+..++.+++++.+++.+|+. .+|..+....+++.+++++|.+ + .|++++|.++
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~---~-~i~~s~G~~a- 181 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTP---D-SILYSYGLST- 181 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCC---C-EEEECCHHHH-
Confidence 567899999875 4677899999999999988643 2455666777888888877753 3 6999999885
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh--cCCCcEEEEECCCCCCccc
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE--TVKKPWVYISGPTINPTGL 762 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~--~~~~~~vil~~P~~NPTG~ 762 (903)
+..++.+++++||.|++....|..+...+...|.+++.++.++.++|..+++++++... ++++++|++..+. ||||.
T Consensus 182 ~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~-~~~G~ 260 (481)
T PLN02822 182 IFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY-QNSGQ 260 (481)
T ss_pred HHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC-CCCCC
Confidence 56688899999999999988888888889999999999987643344444444433321 2233588888887 99999
Q ss_pred CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 763 LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
+.+ +++|.++|++||+++|+||+|+...++..... ....++-.. .+..|+++||||++|++| ||++
T Consensus 261 i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G------~~e~~~v~~--~~~dii~~s~sKalg~~G---G~i~ 326 (481)
T PLN02822 261 IAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG------LSEHFGVPI--EKIDIITAAMGHALATEG---GFCT 326 (481)
T ss_pred ccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCC------hHHHcCCCC--CCCeEEEecchhhhhhCC---eEEE
Confidence 999 89999999999999999999987777643321 111111100 136799999999999999 9999
Q ss_pred eCcHHHHHHHHhCCC--CCC--CcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 843 LNHPQLVDAFSSFPG--LSK--PHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 843 ~~~~~li~~l~~~~~--~~~--~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++ +++.++.... ..+ .++..|.++.++|+.. +. ..++++.+++|++++.
T Consensus 327 g~~~-ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l-------~~-~~~~~~~l~~~~~~l~ 381 (481)
T PLN02822 327 GSAR-VVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-------ED-NPSVLAKLKENIALLH 381 (481)
T ss_pred cCHH-HHHHHHhcCCceeeccccCHHHHHHHHHHHHHH-------Hh-CHHHHHHHHHHHHHHH
Confidence 9887 9988875443 222 3466788888888411 11 1345556666666553
No 127
>PRK07049 methionine gamma-lyase; Validated
Probab=99.83 E-value=2.3e-19 Score=207.01 Aligned_cols=188 Identities=13% Similarity=0.133 Sum_probs=146.7
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCCCC
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTESEV 729 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~~~ 729 (903)
...+++.+++.+|.+ ++++++|+++++..++.+++++||.|++++|+|+.+...+ +..|++++.++.
T Consensus 85 ~~~Le~~lA~leg~~-----~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~---- 155 (427)
T PRK07049 85 SEIVEDRLAVYEGAE-----SAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD---- 155 (427)
T ss_pred HHHHHHHHHHHhCCC-----cEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC----
Confidence 456777777777632 4777777778999999999999999999999999997664 567999887762
Q ss_pred CcccCHHHHHHHhh-----cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHh---CCcEEEEecCCCCCccCCCCCCC
Q 043334 730 GFKMTEKTLVTILE-----TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAK---YGARVVIDTAFSGLEFNYEGWGG 801 (903)
Q Consensus 730 ~f~ld~~~L~~~l~-----~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k---~~i~VI~DeaY~~l~f~~~~~s~ 801 (903)
+ .|++.+++.+. +++ ++|++++|+ ||||.+++.+++.+|++.|+. ++++||+||+|....+.. +
T Consensus 156 ~--~d~~~l~~~l~~~~~~~~t-klv~lesP~-NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-p--- 227 (427)
T PRK07049 156 G--LSEAAIGAAAEAAAAKGRV-SLILIETPA-NPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-P--- 227 (427)
T ss_pred C--CCHHHHHHHHHhhccCCCc-eEEEEECCC-CCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC-c---
Confidence 1 46677776664 234 599999998 999999999999999988654 689999999985432211 1
Q ss_pred CchhhhhhhhccCCCCCCceEEEccCchhcc-cccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 802 WDLEGCLSKLYSSTNSSFNVSLLGGLSLKML-TGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 802 ~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g-~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
+ .. +..|+++||||.+| .+|+|+||++++++ +++.+.+... ..+.+...|+++...|
T Consensus 228 ------l----~~----g~divv~S~SK~~gG~~glr~G~vv~~~~-l~~~l~~~~~~~g~~ls~~~a~l~~r~L 287 (427)
T PRK07049 228 ------L----EH----GADLSVYSLTKYVGGHSDLVAGAVLGRKA-LIRQVRALRSAIGTQLDPHSCWMLGRSL 287 (427)
T ss_pred ------c----cc----CCCEEEEcCceeecCCCCcEEEEEECCHH-HHHHHHHHHHhcCCCCCHHHHHHHHcCC
Confidence 1 11 25789999999999 69999999998876 9898887655 4558888888887777
No 128
>PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=99.83 E-value=1.5e-19 Score=199.18 Aligned_cols=178 Identities=22% Similarity=0.294 Sum_probs=138.2
Q ss_pred cccCCcccCcchhHHHHHH-hhcC-CCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc
Q 043334 2 MVIPSIFIPEDWSFTFYEG-LNRH-PDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL 79 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~-L~~~-~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl 79 (903)
.|.|+||+|+..+..++.. +... +. ....+|||+|||+|.+++.++...++.+|+|+|+|+.+++.|++|+..+++
T Consensus 105 ~v~~~vlipr~~te~lv~~~l~~~~~~--~~~~~VLDlG~GsG~iai~la~~~p~~~V~avDis~~al~~A~~n~~~~~l 182 (307)
T PRK11805 105 YVDERVLVPRSPIAELIEDGFAPWLED--PPVTRILDLCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEINIERHGL 182 (307)
T ss_pred EECCCCcCCCCchHHHHHHHHHHHhcc--CCCCEEEEEechhhHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 5899999999766554443 2221 21 113689999999999999999998889999999999999999999998876
Q ss_pred ccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccc
Q 043334 80 DEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGF 159 (903)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~ 159 (903)
.++++++++|+.+.... ++||+|++||||+.......+..++. + .+..++.+
T Consensus 183 ---------------~~~i~~~~~D~~~~l~~--~~fDlIvsNPPyi~~~~~~~l~~~~~-~---------eP~~AL~g- 234 (307)
T PRK11805 183 ---------------EDRVTLIESDLFAALPG--RRYDLIVSNPPYVDAEDMADLPAEYR-H---------EPELALAA- 234 (307)
T ss_pred ---------------CCcEEEEECchhhhCCC--CCccEEEECCCCCCccchhhcCHhhc-c---------CccceeeC-
Confidence 25799999999775432 37999999999998765444443332 2 33445554
Q ss_pred ccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 160 VEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 160 v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
+.+|++.++.+++++.++|+|||.++++++.. +..+.+++.+.+|.....
T Consensus 235 --g~dGl~~~~~i~~~a~~~L~pgG~l~~E~g~~--~~~~~~~~~~~~~~~~~~ 284 (307)
T PRK11805 235 --GDDGLDLVRRILAEAPDYLTEDGVLVVEVGNS--RVHLEEAYPDVPFTWLEF 284 (307)
T ss_pred --CCchHHHHHHHHHHHHHhcCCCCEEEEEECcC--HHHHHHHHhhCCCEEEEe
Confidence 78899999999999999999999999999875 334677888878765444
No 129
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.82 E-value=4.8e-19 Score=198.18 Aligned_cols=223 Identities=14% Similarity=0.056 Sum_probs=164.2
Q ss_pred CCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcC
Q 043334 624 QSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPA 703 (903)
Q Consensus 624 ~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~ 703 (903)
++++++++.+++++.+....+ ..+|.....+.+++.+++++| + + ++++++|+++++..++.+++++||.|+++.
T Consensus 5 ~~~~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~~a~~~g-~---~-~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~ 78 (338)
T cd06502 5 DTVTGPTPEMLEAMAAANVGD-DVYGEDPTTAKLEARAAELFG-K---E-AALFVPSGTAANQLALAAHTQPGGSVICHE 78 (338)
T ss_pred ccCCCCCHHHHHHHHhcccCC-cccCCCHHHHHHHHHHHHHhC-C---C-eEEEecCchHHHHHHHHHhcCCCCeEEEec
Confidence 556778899999988765332 234555678888889988888 2 2 566777777999999999999999999999
Q ss_pred CCcHHHHH---HHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-------CCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 704 GSNGNYVS---AARFLKANIVNIPTESEVGFKMTEKTLVTILET-------VKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 704 P~y~~~~~---~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-------~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
|+|..+.. .+...|++++.++.+ .+.+|++++++++++ ++ ++|++++|+ || |.+++.+++++|+
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~-~~v~l~~p~-n~-g~~~~~~~l~~i~ 152 (338)
T cd06502 79 TAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPP-SLVSLENTT-EG-GTVYPLDELKAIS 152 (338)
T ss_pred CcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcc-eEEEEEeec-CC-ccccCHHHHHHHH
Confidence 99876432 355689999999874 256999999999875 34 589999998 98 7777999999999
Q ss_pred HHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE-eCcHHHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV-LNHPQLVDAF 852 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv-~~~~~li~~l 852 (903)
++|+++|+++|+||+|.......... + ...... +..+++.|+||.|+++| |+++ ++++ +++.+
T Consensus 153 ~~~~~~~~~livDea~~~~~~~~~~~---~----~~~~~~-----~~d~~~~s~sK~~~~~~---g~~~~~~~~-~~~~~ 216 (338)
T cd06502 153 ALAKENGLPLHLDGARLANAAAALGV---A----LKTYKS-----GVDSVSFCLSKGGGAPV---GAVVVGNRD-FIARA 216 (338)
T ss_pred HHHHHcCCeEeechHHHHHHHHhcCC---C----HHHHHh-----cCCEEEEeccccCCCcc---ceEEECCHH-HHHHH
Confidence 99999999999999984221111110 1 111111 12356889999999887 6554 5555 88888
Q ss_pred HhCCC----CCCCcHHHHHHHHHHHh
Q 043334 853 SSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 853 ~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
..... ....+.+.|.++..+|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~a~~~~L~ 242 (338)
T cd06502 217 RRRRKQAGGGMRQSGFLAAAGLAALE 242 (338)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHhc
Confidence 76542 34456778888888884
No 130
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.82 E-value=1.5e-18 Score=197.66 Aligned_cols=263 Identities=11% Similarity=0.070 Sum_probs=185.3
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCC--CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNM--SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~--~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...|||..| .+.++ .++.+.+++.+++.++.. ..+..+.+..+++.+++++|.+ ++++++|+++++.
T Consensus 24 ~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-----~~~~~~sg~~a~~ 98 (379)
T TIGR00707 24 VNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGAD-----RVFFCNSGAEANE 98 (379)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCCC-----EEEEeCCcHHHHH
Confidence 457789999886 44455 458899999998876422 2234567889999999988753 6999999999999
Q ss_pred HHHHHhc---c----CCCeEEEcCCCcHHHHHHHHHcCCEEEE----ecCCCCCCccc--CHHHHHHHhhcCCCcEEEEE
Q 043334 687 KLVLCCI---L----EGGTLCFPAGSNGNYVSAARFLKANIVN----IPTESEVGFKM--TEKTLVTILETVKKPWVYIS 753 (903)
Q Consensus 687 ~ll~~l~---~----pGD~Vlv~~P~y~~~~~~~~~~G~~vv~----v~~~~~~~f~l--d~~~L~~~l~~~~~~~vil~ 753 (903)
.++..+. . +||+|++++|+|..+...+...++.... .++..+..+.. |++.+++.+++++ ++|+++
T Consensus 99 ~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~v~~~ 177 (379)
T TIGR00707 99 AALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDET-AAVIVE 177 (379)
T ss_pred HHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCe-eEEEEE
Confidence 8887552 2 3799999999998887777666654422 23322222222 8999999987765 477775
Q ss_pred CCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcc
Q 043334 754 GPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKML 832 (903)
Q Consensus 754 ~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g 832 (903)
.++ ||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+... ........+ ++ .+|||.++
T Consensus 178 p~~-~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~-------~~~~~~~~~----d~---~t~sK~~~ 242 (379)
T TIGR00707 178 PIQ-GEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFF-------AYEHYGIEP----DI---ITLAKGLG 242 (379)
T ss_pred ccc-cCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-------hHHhcCCCC----CE---EEEccccc
Confidence 443 777764 799999999999999999999999998766654321 111111111 23 26899999
Q ss_pred cccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 833 TGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 833 ~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
+|+|+||++++++ +++.+.... ...+.+.++|.++.++|+.-+. ..+.+++.++++.++++.+
T Consensus 243 -~G~riG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~--~~~~~~~~~~~~~~~~~l~ 307 (379)
T TIGR00707 243 -GGVPIGATLAKEE-VAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK--ERLLENVKEKGDYFKERLE 307 (379)
T ss_pred -CCcccEEEEEcHH-HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHH
Confidence 9999999999877 999988643 3566789999999988842111 2244555556555555443
No 131
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.82 E-value=2e-18 Score=195.52 Aligned_cols=202 Identities=12% Similarity=0.101 Sum_probs=153.3
Q ss_pred CCCcHHHHHHHHHHHHccCCC---CC-c----hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCe
Q 043334 627 LPIPSLVKAAIFESFARQNMS---ES-E----IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGT 698 (903)
Q Consensus 627 ~~~p~~v~~al~~al~~y~~~---~G-~----~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~ 698 (903)
-+..+.+.+++.+....++.+ .| . .+....+++.+++.+|+ + ++++|+|+++++..++.+++++||.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~---~i~~~~g~t~al~~~l~~~~~~gd~ 85 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--D---EARVTPGAREGKFAVMHSLCEKGDW 85 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--c---eEEEeCCHHHHHHHHHHHhcCCCCE
Confidence 345566666665554322211 11 1 23355677777787887 3 7999999999999999999999999
Q ss_pred EEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc------CCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 699 LCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET------VKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 699 Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~------~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
|+++.++|......++..|++++.++++.+++|.+|++.+++++++ ...+++++++|+ ||||.+.+ +++|
T Consensus 86 Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~-n~tG~~~~---~~~i 161 (361)
T cd06452 86 VVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVD-GNYGNLHD---AKKI 161 (361)
T ss_pred EEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCC-CCCeeecc---HHHH
Confidence 9999998877777889999999999997655578999999998863 123599999998 99998865 7889
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
.++|+++|++||+|++|+. ...+. + .. .. +..++++|+||.++ +|.|+||++++++ +++.+
T Consensus 162 ~~~~~~~~~~vivD~a~~~---g~~~~---~----~~---~~----~~d~~~~s~~K~l~-~~~~~G~l~~~~~-~~~~l 222 (361)
T cd06452 162 AKVCHEYGVPLLLNGAYTV---GRMPV---S----GK---EL----GADFIVGSGHKSMA-ASAPIGVLATTEE-WADIV 222 (361)
T ss_pred HHHHHHcCCeEEEECCccc---CCcCC---C----HH---Hc----CCCEEEecCCcccc-CCCCeEEEEECHH-HHHHH
Confidence 9999999999999999962 11111 1 11 11 35789999999997 5569999999877 88888
Q ss_pred HhCC
Q 043334 853 SSFP 856 (903)
Q Consensus 853 ~~~~ 856 (903)
.+..
T Consensus 223 ~~~~ 226 (361)
T cd06452 223 FRTS 226 (361)
T ss_pred hccc
Confidence 7654
No 132
>KOG2904 consensus Predicted methyltransferase [General function prediction only]
Probab=99.81 E-value=2e-19 Score=185.78 Aligned_cols=164 Identities=18% Similarity=0.268 Sum_probs=132.4
Q ss_pred CcccCCcccCc----chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Q 043334 1 MMVIPSIFIPE----DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYL 76 (903)
Q Consensus 1 ~~~~p~vfiP~----~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~ 76 (903)
|.+.||||||| +|.....+.+++. +..++..+||+|||+|.+++.++..+|...|+++|.|+.++..|.+|+..
T Consensus 117 l~~~pgVlIPRpETEE~V~~Vid~~~~~--~~~~~~~ildlgtGSGaIslsll~~L~~~~v~AiD~S~~Ai~La~eN~qr 194 (328)
T KOG2904|consen 117 LVCKPGVLIPRPETEEWVEAVIDALNNS--EHSKHTHILDLGTGSGAISLSLLHGLPQCTVTAIDVSKAAIKLAKENAQR 194 (328)
T ss_pred EEecCCeeecCccHHHHHHHHHHHHhhh--hhcccceEEEecCCccHHHHHHHhcCCCceEEEEeccHHHHHHHHHHHHH
Confidence 46889999998 4555545555543 23566789999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcchhhhcccCCcEEEEEccc----cccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccc
Q 043334 77 NALDEKGQPIYDAEKKTLLDRVEFHESDL----LAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSN 152 (903)
Q Consensus 77 ~gl~~~~~~~~~~~~~~~~~~v~~~~gDl----~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~ 152 (903)
+++ .+++.+++-++ ........+++|+++|||||+..++...+..++..+ +|
T Consensus 195 ~~l---------------~g~i~v~~~~me~d~~~~~~l~~~~~dllvsNPPYI~~dD~~~l~~eV~~y---------Ep 250 (328)
T KOG2904|consen 195 LKL---------------SGRIEVIHNIMESDASDEHPLLEGKIDLLVSNPPYIRKDDNRQLKPEVRLY---------EP 250 (328)
T ss_pred Hhh---------------cCceEEEecccccccccccccccCceeEEecCCCcccccchhhcCchheec---------Cc
Confidence 887 36788775444 443333345999999999999998877666666654 44
Q ss_pred cccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCC
Q 043334 153 YCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGR 193 (903)
Q Consensus 153 ~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~ 193 (903)
..|+.| +.+|.+.+..++.-+.|+|+|||.+.++....
T Consensus 251 ~lALdG---g~eG~~~~~~~~~~a~R~Lq~gg~~~le~~~~ 288 (328)
T KOG2904|consen 251 KLALDG---GLEGYDNLVHYWLLATRMLQPGGFEQLELVER 288 (328)
T ss_pred hhhhcc---ccchhHHHHHHHHhhHhhcccCCeEEEEeccc
Confidence 556777 78899999999999999999999999988744
No 133
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.81 E-value=2e-18 Score=196.35 Aligned_cols=177 Identities=12% Similarity=0.076 Sum_probs=139.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcc
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFK 732 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ 732 (903)
....+.+.+++++|.+ .+++++|+++++..++.+++++||.|+++.+.|......++..|++++.++.+.+++|.
T Consensus 52 ~~~~~~e~lA~~~g~~-----~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~ 126 (370)
T TIGR02539 52 PIHDFLEDLAEFLGMD-----EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYK 126 (370)
T ss_pred HHHHHHHHHHHHhCCC-----ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCC
Confidence 3445556688888875 35668999999999999999999999999888655557789999999999987655788
Q ss_pred cCHHHHHHHhhc------CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 733 MTEKTLVTILET------VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 733 ld~~~L~~~l~~------~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
+|++++++.+++ ...++|++++|+ ||||...+ +++|.++|+++|+++|+||+|+... .+. +
T Consensus 127 ~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~-~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~---~~~---~--- 193 (370)
T TIGR02539 127 VDPEGYGEVIEEVEDESGKPPVLALLTHVD-GEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGR---MPV---S--- 193 (370)
T ss_pred cCHHHHHHHHHHhhhccCCCcEEEEEECCC-CCCccccC---HHHHHHHHHHcCCeEEEECccccCC---cCC---C---
Confidence 999999999864 123589999998 99999887 7788889999999999999996421 110 0
Q ss_pred hhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~ 857 (903)
.. .. +..++++||||.++ +|.|+||++++++ +++.+.....
T Consensus 194 -~~---~~----~~di~v~s~sK~~~-~~g~~G~l~~~~~-~i~~l~~~~~ 234 (370)
T TIGR02539 194 -AK---EI----GADFIVGSGHKSMA-ASGPCGVLGMSEE-WEDIVLRKSR 234 (370)
T ss_pred -HH---Hc----CCCEEEeeCccccc-CCCCEEEEEECHH-HHhhhccccc
Confidence 11 11 24577799999998 5778999999887 9998887654
No 134
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.79 E-value=9.5e-18 Score=193.37 Aligned_cols=231 Identities=13% Similarity=0.067 Sum_probs=166.0
Q ss_pred CCCeEEccCC-CCCCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 614 NSGLIHMDVD-QSFLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 614 ~~~~IdLs~g-~p~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
+.+.++++.+ .++++.++.+++++.+.+..++. .+|..+....+++.+++++|.+ + .|++++|+++ .
T Consensus 45 ~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~---~-~i~~~sG~~a-~ 119 (410)
T PRK13392 45 PRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKE---S-ALLFTSGYVS-N 119 (410)
T ss_pred CceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCC---C-EEEECcHHHH-H
Confidence 3456777654 46677899999999998887643 2455556678888899988853 2 6999999744 4
Q ss_pred HHHHHHhc--cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh----cCCCcEEEEECCCCCC
Q 043334 686 NKLVLCCI--LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE----TVKKPWVYISGPTINP 759 (903)
Q Consensus 686 ~~ll~~l~--~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~----~~~~~~vil~~P~~NP 759 (903)
..++..++ .+||.|+++.+.|..+...++..|+++..++.+ |.+.+++.+. +++ ++|++++|+ ||
T Consensus 120 ~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~~t-~~v~i~~~~-n~ 190 (410)
T PRK13392 120 DAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVDPDRP-KLIAFESVY-SM 190 (410)
T ss_pred HHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhccCCCC-EEEEEeCCC-CC
Confidence 44455454 489988888878888888888899998777532 3444544443 334 589999998 99
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
||.+++ +++|.++|+++|+++|+||+|+...|+..... .... .+.. ....++++||||.||++| |
T Consensus 191 tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g------~~~~-~~~~--~~~div~~tlsK~~g~~G---G 255 (410)
T PRK13392 191 DGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGG------IAER-DGLM--DRIDMIQGTLAKAFGCLG---G 255 (410)
T ss_pred Cccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCc------hhhh-ccCC--CCCcEEEEEChHhhhccc---c
Confidence 999998 88888999999999999999985455433211 1111 1111 013488999999999999 9
Q ss_pred EEEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 840 FLVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 840 ~lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
|++++++ +++.+++... ..+.+++.|.++..+|+
T Consensus 256 ~~~~~~~-~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~ 293 (410)
T PRK13392 256 YIAASAD-LIDFVRSFAPGFIFTTALPPAVAAGATAAIR 293 (410)
T ss_pred hhhcCHH-HHHHHHHhCcchhccCcCCHHHHHHHHHHHH
Confidence 9999876 9998887653 23455577888888884
No 135
>PRK10534 L-threonine aldolase; Provisional
Probab=99.79 E-value=1.4e-18 Score=194.41 Aligned_cols=229 Identities=12% Similarity=0.079 Sum_probs=154.1
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCC
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEG 696 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pG 696 (903)
+|||+.++++. +++.+++++.+..... ..+|.......+++.+++++|++ .+++++|+++++..++.+++.+|
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~~-~~Y~~~~~~~~L~~~la~~~g~~-----~~~v~~~g~~a~~~~l~~~~~~g 73 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPVGD-DVYGDDPTVNALQDYAAELSGKE-----AALFLPTGTQANLVALLSHCERG 73 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccCCC-cccCCCHHHHHHHHHHHHHhCCC-----eEEEeCchHHHHHHHHHHhcCCC
Confidence 47899999988 7888999887654332 22332333445555556667763 34566666666666677889999
Q ss_pred CeEEEcCCCcHH-HHHH-HHHcC-CEEEEecCCCCCCcccCHHHHHHHhhcC-----CCcEEEEECCCCCCcccCCCHHH
Q 043334 697 GTLCFPAGSNGN-YVSA-ARFLK-ANIVNIPTESEVGFKMTEKTLVTILETV-----KKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 697 D~Vlv~~P~y~~-~~~~-~~~~G-~~vv~v~~~~~~~f~ld~~~L~~~l~~~-----~~~~vil~~P~~NPTG~v~s~ee 768 (903)
|.|+++.|+|.. |... +...| ++++.++.+ .+|.+|+++++++++++ ..++|++|||+ ||.+++.++
T Consensus 74 d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~---~G~v~~~~~ 148 (333)
T PRK10534 74 EEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH---NGKVLPREY 148 (333)
T ss_pred CeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC---CCeecCHHH
Confidence 999999988853 4322 33444 788888875 35889999999988652 22589999664 599999999
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee-EEEeCcHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVLNHPQ 847 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~~~~~ 847 (903)
+++|+++|++++++||+||+|. |........+ ...+.... ++++ .||||.|+++ +| |++++++
T Consensus 149 l~~i~~~~~~~~~~lvvDEA~~---~~~~~~~~~~----~~~~~~~~---~~~~--~s~SK~~~~~---~G~~~~~~~~- 212 (333)
T PRK10534 149 LKQAWEFTRERNLALHVDGARI---FNAVVAYGCE----LKEITQYC---DSFT--ICLSKGLGTP---VGSLLVGNRD- 212 (333)
T ss_pred HHHHHHHHHHcCCeEEeeHHHH---HHHHHHcCCC----HHHHHhcC---CEEE--EEeEcCCCCc---ccceEEcCHH-
Confidence 9999999999999999999984 3211000001 11122211 2333 4899998764 78 6777776
Q ss_pred HHHHHHhCCCCC----CCcHHHHHHHHHHH
Q 043334 848 LVDAFSSFPGLS----KPHSTVRYAIKKLL 873 (903)
Q Consensus 848 li~~l~~~~~~~----~~s~~~Q~aa~~~L 873 (903)
+++.+.++.... ..+.+.|.++...|
T Consensus 213 ~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l 242 (333)
T PRK10534 213 YIKRARRWRKMTGGGMRQAGILAAAGLYAL 242 (333)
T ss_pred HHHHHHHHHHHhCCchhhHHHHHHHHHHHH
Confidence 999998766422 23446677777777
No 136
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.79 E-value=6.7e-18 Score=193.45 Aligned_cols=238 Identities=11% Similarity=0.070 Sum_probs=174.8
Q ss_pred CCCCCeEEccCCCC--CCCC-cHHHHHHHHHHHHccC--CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQS--FLPI-PSLVKAAIFESFARQN--MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~~-p~~v~~al~~al~~y~--~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...||+..|.+ .++. .+.+.+++.+.+.... ...+..+++.++++++++..|. + ++++++|+++++.
T Consensus 36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~----~-~v~~~~gg~eA~~ 110 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGM----D-KVFFCNSGAEANE 110 (396)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCC----C-EEEECCCcHHHHH
Confidence 46778899987643 4554 5789999888876532 2234577899999999987653 3 8999999999999
Q ss_pred HHHHHhccCC-------CeEEEcCCCcHHHHHHHHHcCCEEE----EecCCCCCCc----ccCHHHHHHHhhcCCCcEEE
Q 043334 687 KLVLCCILEG-------GTLCFPAGSNGNYVSAARFLKANIV----NIPTESEVGF----KMTEKTLVTILETVKKPWVY 751 (903)
Q Consensus 687 ~ll~~l~~pG-------D~Vlv~~P~y~~~~~~~~~~G~~vv----~v~~~~~~~f----~ld~~~L~~~l~~~~~~~vi 751 (903)
.++..+...+ ++|++..++|..+...+...+.... ..++. .++ ..|++.+++.+.+++ ++|+
T Consensus 111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~~~-~~vi 187 (396)
T PRK02627 111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITDKT-AAVM 187 (396)
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCCCe-EEEE
Confidence 9998776544 6799999999877655544433221 11221 122 128999999987655 4777
Q ss_pred EECCCCCCcc-cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchh
Q 043334 752 ISGPTINPTG-LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLK 830 (903)
Q Consensus 752 l~~P~~NPTG-~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~ 830 (903)
+++++ |||| .+++.+.+++|.++|+++|++||+||+|.++.+.+... + .....-.+ . +.||||.
T Consensus 188 i~p~~-~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~---~----~~~~~~~p----d---i~t~sK~ 252 (396)
T PRK02627 188 LEPIQ-GEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLF---A----YQHYGIEP----D---IMTLAKG 252 (396)
T ss_pred Eeccc-CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCcee---e----ehhcCCCC----C---EEEEcch
Confidence 77774 9999 78999999999999999999999999998876655321 1 11111111 2 3479999
Q ss_pred cccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHh
Q 043334 831 MLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 831 ~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
++ +|+|+||++++++ +++.+.... .+.+.+.+.|.++.++|+
T Consensus 253 ~~-~G~rig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 296 (396)
T PRK02627 253 LG-GGVPIGAVLAKEK-VADVFTPGDHGSTFGGNPLACAAALAVIE 296 (396)
T ss_pred hh-CCcccEEEEEcHH-HHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 98 9999999999987 888887533 377789999999999994
No 137
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.79 E-value=1.9e-17 Score=186.03 Aligned_cols=229 Identities=14% Similarity=0.146 Sum_probs=163.8
Q ss_pred eEEccCCC-CCCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 617 LIHMDVDQ-SFLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 617 ~IdLs~g~-p~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
+++|+.+. -..+.++++.+++.+.+.++.. ..|..+.++++++.+++++|.+ + .|++++|+ +++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~---~-~iv~~sg~-~a~~~~ 77 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE---A-ALVFSSGY-AANDGV 77 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC---C-EEEeccHH-HHHHHH
Confidence 34454332 2234468899999999876432 2366778888999999988863 2 56666665 566666
Q ss_pred HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc----CCCcEEEEECCCCCCcccCC
Q 043334 689 VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET----VKKPWVYISGPTINPTGLLY 764 (903)
Q Consensus 689 l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~----~~~~~vil~~P~~NPTG~v~ 764 (903)
+.+++++||.|++++|+|+.+...++..|++++.++. +|++.+++.+++ .+..++++++|+ ||||.+.
T Consensus 78 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~-~~tG~~~ 149 (349)
T cd06454 78 LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVY-SMDGDIA 149 (349)
T ss_pred HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEeccc-cCCCCcc
Confidence 7888899999999999999999899999999988863 467788888764 233577778887 9999987
Q ss_pred CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 765 SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 765 s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+ +++|.++|+++|+++|+|++|+...+...... . .... ... .+.+++++|+||.++++| ||++++
T Consensus 150 ~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~-~---~~~~-~~~----~~~~i~~~s~sK~~~~~g---G~i~~~ 214 (349)
T cd06454 150 P---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRG-V---EEFG-GLT----DDVDIIMGTLGKAFGAVG---GYIAGS 214 (349)
T ss_pred C---HHHHHHHHHHcCCEEEEEccccccccCCCCCC-h---hhhc-ccc----ccCcEEEeechhhhcccC---CEEECC
Confidence 7 78889999999999999999964333221110 0 0111 111 247899999999998766 999988
Q ss_pred cHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 845 HPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 845 ~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
++ +++.+..... ....+...+.++...|.
T Consensus 215 ~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 247 (349)
T cd06454 215 KE-LIDYLRSYARGFIFSTSLPPAVAAAALAALE 247 (349)
T ss_pred HH-HHHHHHHhchhhhccCCCCHHHHHHHHHHHH
Confidence 76 8887765432 23455666667777773
No 138
>PLN02721 threonine aldolase
Probab=99.79 E-value=8e-18 Score=189.46 Aligned_cols=216 Identities=11% Similarity=0.034 Sum_probs=146.5
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc-
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL- 694 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~- 694 (903)
.+++|+.|.++. +++.+.+++.... ......++.+....+++.+++++|.+. .+++++|+.+.+ .++.++++
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~----~~~~~~Gs~a~~-~~l~~~~~~ 78 (353)
T PLN02721 6 RVVDLRSDTVTK-PTDAMRAAMANAE-VDDDVLGYDPTALRLEEEMAKIFGKEA----ALFVPSGTMGNL-ISVLVHCDV 78 (353)
T ss_pred hhhhhhcccccC-CCHHHHHHHHhcc-CCCcccCCCHHHHHHHHHHHHHhCCce----eEEecCccHHHH-HHHHHHccC
Confidence 468899999886 5677777776531 111122333334556666666666542 366667766655 56666777
Q ss_pred CCCeEEEcCCCcHHHHH---HHHHcCCEEEEecCCCCCCcccCHHHHHHHhh-------cCCCcEEEEECCCCCCcccCC
Q 043334 695 EGGTLCFPAGSNGNYVS---AARFLKANIVNIPTESEVGFKMTEKTLVTILE-------TVKKPWVYISGPTINPTGLLY 764 (903)
Q Consensus 695 pGD~Vlv~~P~y~~~~~---~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~-------~~~~~~vil~~P~~NPTG~v~ 764 (903)
+||.|++++|+|..... .+...|++++.+|.++ ++.+|++.+++.++ +++ +++++++|++||||.++
T Consensus 79 ~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~-~~v~l~~~~~np~G~~~ 155 (353)
T PLN02721 79 RGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTT-RLICLENTHANCGGRCL 155 (353)
T ss_pred CCCeEEEcCccceehhcccchhhhcCceeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcc-eEEEEeccccccCCccc
Confidence 99999999999754333 5778899999998763 46789999999997 345 58888776559999999
Q ss_pred CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE-EEe
Q 043334 765 SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF-LVL 843 (903)
Q Consensus 765 s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~-lv~ 843 (903)
+.+++++|.++|+++|++||+|++|....+.... .+. ...... ...++.|+||.++. ++|| +++
T Consensus 156 ~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~---~~~---~~~~~~------~d~~~~s~sK~l~~---~~G~~~~~ 220 (353)
T PLN02721 156 SVEYTDKVGELAKRHGLKLHIDGARIFNASVALG---VPV---HRLVKA------ADSVSVCLSKGLGA---PVGSVIVG 220 (353)
T ss_pred cHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhC---CCH---HHHhhh------CCEEEEecccccCC---ceeeEEec
Confidence 9999999999999999999999998421111001 111 111111 22345579999863 4676 455
Q ss_pred CcHHHHHHHHhCCC
Q 043334 844 NHPQLVDAFSSFPG 857 (903)
Q Consensus 844 ~~~~li~~l~~~~~ 857 (903)
+++ +++.+.....
T Consensus 221 ~~~-~~~~~~~~~~ 233 (353)
T PLN02721 221 SKS-FIRKAKRLRK 233 (353)
T ss_pred CHH-HHHhHHHHHH
Confidence 554 8887766543
No 139
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.79 E-value=7.7e-18 Score=193.05 Aligned_cols=210 Identities=15% Similarity=0.156 Sum_probs=163.7
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHH--HHccCC-----CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecC-chHHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFES--FARQNM-----SESEIDVTPSIQQYIKSNFGFPIDINAEFIYAD-CSQSLF 685 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~a--l~~y~~-----~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~-Gs~~al 685 (903)
+.+++++++|++++++|+.+.++..++ ...|.+ ..|.+++++++++++++.+|.+.+ ++++++ |++++.
T Consensus 19 ~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~---~v~~~~~g~~~~~ 95 (398)
T cd00613 19 DQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVA---NASLQDEATAAAE 95 (398)
T ss_pred ccCcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCcc---ceeccCchHHHHH
Confidence 446799999999999999888776665 112443 578899999999999999998654 465555 665666
Q ss_pred HHHHHHhccC--CCeEEEcCCCcHHHHHHHHHcC----CEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCC
Q 043334 686 NKLVLCCILE--GGTLCFPAGSNGNYVSAARFLK----ANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINP 759 (903)
Q Consensus 686 ~~ll~~l~~p--GD~Vlv~~P~y~~~~~~~~~~G----~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NP 759 (903)
..+..+++.+ ||+|++++|.|+.+...+...| ++++.++++. ++.+|++++++.+++++ ++|++++| ||
T Consensus 96 ~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t-~~viv~~~--~~ 170 (398)
T cd00613 96 AAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEV-AALMVQYP--NT 170 (398)
T ss_pred HHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCe-EEEEEECC--CC
Confidence 6666666776 9999999999999998888887 9999999853 45689999999998766 58888887 48
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc----c
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG----A 835 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~----G 835 (903)
||.+. +.+++|.++|+++|+++|+|+++......... . .. +..++++|++|.+ +| |
T Consensus 171 ~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~~~~----------~---~~----~~d~~~~s~~K~~-~p~g~Gg 230 (398)
T cd00613 171 LGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGLKPP----------G---EY----GADIVVGNLQKTG-VPHGGGG 230 (398)
T ss_pred Cceec--chHHHHHHHHHhcCCEEEEEeccccccCCCCh----------H---Hc----CCCEEEeeccccC-CCCCCCC
Confidence 99994 45799999999999999999987432211100 0 11 3679999999998 66 8
Q ss_pred ceeeEEEeCcHHHHHHH
Q 043334 836 LKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 836 lRiG~lv~~~~~li~~l 852 (903)
+|+||++.++. +++.+
T Consensus 231 p~~g~l~~~~~-~~~~~ 246 (398)
T cd00613 231 PGAGFFAVKKE-LVRFL 246 (398)
T ss_pred CceeEEEEhhh-hHhhC
Confidence 99999999887 77764
No 140
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.78 E-value=4.9e-17 Score=186.81 Aligned_cols=209 Identities=14% Similarity=0.122 Sum_probs=161.0
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHccCC--CCC-------chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQNM--SES-------EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~--~~G-------~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
.+.+.|+.+... ++|..+.+++.+.+..+.. ..+ ..+..+.+++.+++.+|.+ +++ +|++|+|+++++
T Consensus 18 ~~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~-~i~~~~~~t~~i 94 (401)
T PRK10874 18 DAGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAP-DAK-NIVWTRGTTESI 94 (401)
T ss_pred CceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCC-CCC-EEEEECCHHHHH
Confidence 357888887766 4677889998887764321 112 1334566777788888873 234 899999999999
Q ss_pred HHHHHHh----ccCCCeEEEcCCCcHH----HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCC
Q 043334 686 NKLVLCC----ILEGGTLCFPAGSNGN----YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTI 757 (903)
Q Consensus 686 ~~ll~~l----~~pGD~Vlv~~P~y~~----~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~ 757 (903)
..++.++ +++||+|++++|+|++ +...++..|++++.++++. ++.+|++++++.+++++ +++++++|+
T Consensus 95 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t-~lv~i~~~~- 170 (401)
T PRK10874 95 NLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRT-RILALGQMS- 170 (401)
T ss_pred HHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCc-EEEEEeCCc-
Confidence 9999887 4799999999999865 5566788999999999863 56789999999998877 599999998
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce
Q 043334 758 NPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK 837 (903)
Q Consensus 758 NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR 837 (903)
||||.+++ +++|.++|+++|+++|+|++|+...+. .+ +. .. +..+++.|++|.+|.+|
T Consensus 171 n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~------~~----~~---~~----~~d~~~~s~~K~~gp~G-- 228 (401)
T PRK10874 171 NVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP------AD----VQ---AL----DIDFYAFSGHKLYGPTG-- 228 (401)
T ss_pred ccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc------CC----ch---hc----CCCEEEEecccccCCCc--
Confidence 99999998 778888999999999999999532221 01 11 11 24678899999998777
Q ss_pred eeEEEeCcHHHHHHHH
Q 043334 838 FGFLVLNHPQLVDAFS 853 (903)
Q Consensus 838 iG~lv~~~~~li~~l~ 853 (903)
+||++++++ +++.+.
T Consensus 229 ~G~l~~~~~-~~~~~~ 243 (401)
T PRK10874 229 IGVLYGKSE-LLEAMS 243 (401)
T ss_pred cEEEEEchH-HHhcCC
Confidence 599999877 777664
No 141
>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=99.78 E-value=5.3e-18 Score=184.78 Aligned_cols=182 Identities=24% Similarity=0.332 Sum_probs=140.3
Q ss_pred cccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccccc
Q 043334 2 MVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDE 81 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~ 81 (903)
.+.|++|+|+.-+..+.+.+..... ..++.+|||+|||+|.+++.++...+..+|+|+|+|+.+++.|++|+. ++.
T Consensus 81 ~~~~~~lipr~~te~l~~~~~~~~~-~~~~~~vLDiG~GsG~~~~~la~~~~~~~v~~iDis~~~l~~a~~n~~-~~~-- 156 (275)
T PRK09328 81 KVSPGVLIPRPETEELVEWALEALL-LKEPLRVLDLGTGSGAIALALAKERPDAEVTAVDISPEALAVARRNAK-HGL-- 156 (275)
T ss_pred EECCCceeCCCCcHHHHHHHHHhcc-ccCCCEEEEEcCcHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-hCC--
Confidence 5789999999666666665542211 235679999999999999999999888999999999999999999986 222
Q ss_pred CCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccccc
Q 043334 82 KGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVE 161 (903)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~ 161 (903)
..++.++++|+.+... .++||+|++||||+.......+..++..+ .+..++. +
T Consensus 157 -------------~~~i~~~~~d~~~~~~--~~~fD~Iv~npPy~~~~~~~~~~~~v~~~---------ep~~al~---~ 209 (275)
T PRK09328 157 -------------GARVEFLQGDWFEPLP--GGRFDLIVSNPPYIPEADIHLLQPEVRDH---------EPHLALF---G 209 (275)
T ss_pred -------------CCcEEEEEccccCcCC--CCceeEEEECCCcCCcchhhhCCchhhhc---------CCchhhc---C
Confidence 2479999999976543 23899999999999766544444444332 2333444 4
Q ss_pred ccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 162 DQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 162 ~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
+.+|++.+..+++++.++|+|||.++++++..... .+++++.+.||..+....
T Consensus 210 g~~g~~~~~~~~~~~~~~Lk~gG~l~~e~g~~~~~-~~~~~l~~~gf~~v~~~~ 262 (275)
T PRK09328 210 GEDGLDFYRRIIEQAPRYLKPGGWLLLEIGYDQGE-AVRALLAAAGFADVETRK 262 (275)
T ss_pred CCCHHHHHHHHHHHHHHhcccCCEEEEEECchHHH-HHHHHHHhCCCceeEEec
Confidence 78899999999999999999999999999876554 457789999998666643
No 142
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.78 E-value=4.1e-17 Score=185.60 Aligned_cols=192 Identities=14% Similarity=0.173 Sum_probs=152.9
Q ss_pred cHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcHH
Q 043334 630 PSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNGN 708 (903)
Q Consensus 630 p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~~ 708 (903)
.+..++++.+++.... ..|..++++++++++++++|.+ ++++|+|+++++..++.++ ++|||+|++++|+|+.
T Consensus 10 ~~~e~~a~~~~~~~~~-~~~~g~~~~~~e~~la~~~g~~-----~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~ 83 (376)
T TIGR02379 10 TGQELEYIAEAISEGK-LSGDGPFSRRCETWLENRTGTK-----KALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVS 83 (376)
T ss_pred CHHHHHHHHHHHHcCC-ccCCcHHHHHHHHHHHHHhCCC-----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHH
Confidence 4555778888776533 3445678899999999987652 7999999999999988887 8999999999999999
Q ss_pred HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecC
Q 043334 709 YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTA 788 (903)
Q Consensus 709 ~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~Dea 788 (903)
+...+...|++++.+++++ ++|.+|+++++++++++++ +|+ |+ ||||...+ +++|.++|+++|++||+|++
T Consensus 84 ~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk-~Ii---p~-~~~G~~~d---~~~I~~la~~~~i~vIeDaa 154 (376)
T TIGR02379 84 TANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTK-AIV---PV-HYAGVACD---MDTIMALANKHQLFVIEDAA 154 (376)
T ss_pred HHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCce-EEE---Ee-CCCCCccC---HHHHHHHHHHCCCEEEEECc
Confidence 9999999999999999986 4688999999999987664 554 76 89999987 67889999999999999999
Q ss_pred CCCCc-cCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc----hhcccccceeeEEEeCcHHHHHHHHhCC
Q 043334 789 FSGLE-FNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS----LKMLTGALKFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 789 Y~~l~-f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S----K~~g~~GlRiG~lv~~~~~li~~l~~~~ 856 (903)
|+... |++... . ....+++|| |.+. +|.+.|+++++++++.++++.++
T Consensus 155 ~~~g~~~~~~~~---------g----------~~~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~ 207 (376)
T TIGR02379 155 QGVMSTYKGRAL---------G----------SIGHLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIR 207 (376)
T ss_pred cccCCccCCccc---------C----------CCCCEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHH
Confidence 97654 555431 1 111233444 8884 78899999999777888887543
No 143
>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific. Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3.
Probab=99.77 E-value=7.3e-18 Score=180.97 Aligned_cols=183 Identities=24% Similarity=0.333 Sum_probs=141.5
Q ss_pred cccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccccc
Q 043334 2 MVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDE 81 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~ 81 (903)
.+.+++|+|+..+..+.+.+..... ..+.+|||+|||+|.++..+++.++..+++|+|+++.+++.|++|+..+++
T Consensus 61 ~~~~~~~~p~~~~~~l~~~~l~~~~--~~~~~ilDig~G~G~~~~~l~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~-- 136 (251)
T TIGR03534 61 KVSPGVLIPRPDTEELVEAALERLK--KGPLRVLDLGTGSGAIALALAKERPDARVTAVDISPEALAVARKNAARLGL-- 136 (251)
T ss_pred EECCCcccCCCChHHHHHHHHHhcc--cCCCeEEEEeCcHhHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC--
Confidence 4678899998666655555433222 245689999999999999999988888999999999999999999988776
Q ss_pred CCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccccc
Q 043334 82 KGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVE 161 (903)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~ 161 (903)
++++++++|+.+.... ++||+|++||||+.......+...+..+.+ ..++. .
T Consensus 137 --------------~~~~~~~~d~~~~~~~--~~fD~Vi~npPy~~~~~~~~~~~~~~~~e~---------~~~~~---~ 188 (251)
T TIGR03534 137 --------------DNVTFLQSDWFEPLPG--GKFDLIVSNPPYIPEADIHLLDPEVRFHEP---------RLALF---G 188 (251)
T ss_pred --------------CeEEEEECchhccCcC--CceeEEEECCCCCchhhhhhcChhhhhcCC---------HHHHc---C
Confidence 4799999999875432 389999999999987665555444443322 22333 3
Q ss_pred ccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 162 DQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 162 ~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
+..+...+..+++.+.++|+|||.+++.++.... ..+++++++.||..+..+.+.
T Consensus 189 ~~~~~~~~~~~i~~~~~~L~~gG~~~~~~~~~~~-~~~~~~l~~~gf~~v~~~~d~ 243 (251)
T TIGR03534 189 GEDGLDFYRRIIAQAPRLLKPGGWLLLEIGYDQG-EAVRALFEAAGFADVETRKDL 243 (251)
T ss_pred CCcHHHHHHHHHHHHHHhcccCCEEEEEECccHH-HHHHHHHHhCCCCceEEEeCC
Confidence 5778888999999999999999999999876554 445788999999887775543
No 144
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.77 E-value=6.2e-17 Score=185.80 Aligned_cols=208 Identities=16% Similarity=0.151 Sum_probs=158.4
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccC--CCCC-------chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQN--MSES-------EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~--~~~G-------~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
+.+.|+.+.-. ++|+.+.+++.+.+..+. +..+ ..+..+.+++.+++.+|.+ +++ +|++|+|+++++.
T Consensus 16 ~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~-~i~~t~g~t~~l~ 92 (398)
T TIGR03392 16 GTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAP-DAE-NIVWTRGTTESIN 92 (398)
T ss_pred CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-CCC-eEEEeCChHHHHH
Confidence 57888888765 467888999888765421 1112 1223455666777777874 233 8999999999999
Q ss_pred HHHHHh----ccCCCeEEEcCCCcHH----HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCC
Q 043334 687 KLVLCC----ILEGGTLCFPAGSNGN----YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTIN 758 (903)
Q Consensus 687 ~ll~~l----~~pGD~Vlv~~P~y~~----~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~N 758 (903)
.++.++ +++||+|++++|+|++ +...++..|++++.+|++. ++.+|++.+++++++++ +++++++|+ |
T Consensus 93 ~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t-~lv~i~~~~-n 168 (398)
T TIGR03392 93 LVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRT-RILALGQMS-N 168 (398)
T ss_pred HHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCc-eEEEEECcc-c
Confidence 999887 4799999999999865 4566788999999999864 46689999999998877 589999998 9
Q ss_pred CcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccccee
Q 043334 759 PTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF 838 (903)
Q Consensus 759 PTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi 838 (903)
|||.+++ +++|.++|+++|+++|+|++|+...+.- + +. .. +..+++.|.+|.+|.+| +
T Consensus 169 ~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~~------~----~~---~~----~~d~~~~s~~K~~gp~G--~ 226 (398)
T TIGR03392 169 VTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGPP------D----VQ---AL----DIDFYAFSGHKLYGPTG--I 226 (398)
T ss_pred cccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCCC------C----hh---hc----CCCEEEEecccccCCCc--e
Confidence 9999998 7788999999999999999996332210 1 11 11 24577888889988666 8
Q ss_pred eEEEeCcHHHHHHHH
Q 043334 839 GFLVLNHPQLVDAFS 853 (903)
Q Consensus 839 G~lv~~~~~li~~l~ 853 (903)
||++++++ +++.+.
T Consensus 227 G~l~~~~~-~~~~~~ 240 (398)
T TIGR03392 227 GVLYGKTE-LLEAMP 240 (398)
T ss_pred EEEEEcHH-HHhhCC
Confidence 99999877 777664
No 145
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.77 E-value=1.9e-17 Score=189.91 Aligned_cols=184 Identities=13% Similarity=0.113 Sum_probs=137.8
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCCCCC
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTESEV 729 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~~~~ 729 (903)
...+++.+++++|.+ +.++++|+++++..++.++++|||+|+++.|.|+.+... ++..|++++.++..
T Consensus 66 ~~~Le~~iA~~~g~~-----~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~--- 137 (400)
T PRK06234 66 STEVENKLALLEGGE-----AAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS--- 137 (400)
T ss_pred HHHHHHHHHHHhCCC-----cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC---
Confidence 344555555556642 467777777888888889999999999999988765543 47789999999762
Q ss_pred CcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhC--CcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 730 GFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKY--GARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 730 ~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~--~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
|++++++++++++ ++|++++|+ ||||.+.+ +++|.++|+++ |++||+|++|+...+. .+
T Consensus 138 ----d~e~l~~~i~~~t-klI~iesP~-NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~-~~--------- 198 (400)
T PRK06234 138 ----NLEEVRNALKANT-KVVYLETPA-NPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ-RP--------- 198 (400)
T ss_pred ----CHHHHHHHhccCC-eEEEEECCC-CCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC-Cc---------
Confidence 6899999998877 599999998 99999998 78888888886 9999999999754332 11
Q ss_pred hhhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhCC--C--CCCCcHHHHHHHHHHH
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSFP--G--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~~--~--~~~~s~~~Q~aa~~~L 873 (903)
+. . +..++++|+||.++++|+|+ ||++++++ +++.++... . ....+.+..+.+...|
T Consensus 199 l~----~----g~Divv~S~sK~l~g~g~~~gG~v~~~~~-~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l 260 (400)
T PRK06234 199 LQ----L----GADVVVHSATKYLNGHGDVIAGFVVGKEE-FINQVKLFGIKDMTGSVIGPFEAFLIIRGM 260 (400)
T ss_pred hh----h----CCcEEEeeccccccCCCCceeEEEEecHH-HHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 11 1 25699999999999999886 99999887 888876432 1 3344444444444444
No 146
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.77 E-value=2e-17 Score=190.05 Aligned_cols=213 Identities=12% Similarity=0.058 Sum_probs=157.2
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHH-HccC----------CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESF-ARQN----------MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al-~~y~----------~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
...++|..|++.. ++.+++++...+ ..|. ...+.+.+++.+++.+++.+|.+.. +|++++| ++
T Consensus 19 ~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~---~v~~~sg-t~ 92 (402)
T cd00378 19 RETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA---NVQPHSG-SQ 92 (402)
T ss_pred HhCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce---eeecCCc-HH
Confidence 4578888777664 678888887654 2331 1223455667778888888998743 6777765 58
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHH-----HHHcCCEEEEecCCCC-CCcccCHHHHHHHhhcCCCcEEEEECCCC
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSA-----ARFLKANIVNIPTESE-VGFKMTEKTLVTILETVKKPWVYISGPTI 757 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~-----~~~~G~~vv~v~~~~~-~~f~ld~~~L~~~l~~~~~~~vil~~P~~ 757 (903)
++..++.++++|||+|++++|+|+.+... ++..|+++..++++.+ +++.+|++++++.+.....+++++++|+
T Consensus 93 a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~- 171 (402)
T cd00378 93 ANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASA- 171 (402)
T ss_pred HHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcc-
Confidence 88889999999999999999999876544 6668888888877643 2688999999999864333588888887
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCcEEEEecCC-CCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 758 NPTGLLYSNKEIENILTVCAKYGARVVIDTAF-SGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 758 NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY-~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
||+. . ++++|.++|+++|++||+|++| .++.+.+... .. +.. ..++++|+||++ +|+
T Consensus 172 ~~~~--~---~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~------~~---~~~------~dv~~~s~sK~l--~G~ 229 (402)
T cd00378 172 YPRP--I---DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFP------NP---LPG------ADVVTTTTHKTL--RGP 229 (402)
T ss_pred cCCC--c---CHHHHHHHHHhcCCEEEEEccchhhhhhcccCC------Cc---ccC------CcEEEeccccCC--CCC
Confidence 8753 3 3889999999999999999995 5555544321 01 111 136899999977 799
Q ss_pred eeeEEEeCcHHHHHHHHhCC
Q 043334 837 KFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~~~ 856 (903)
|.||++++++++++.+.+..
T Consensus 230 ~gg~i~~~~~~~~~~l~~~~ 249 (402)
T cd00378 230 RGGLILTRKGELAKKINSAV 249 (402)
T ss_pred CceEEEeccHHHHHHHHHHh
Confidence 99999998844988887654
No 147
>PLN02483 serine palmitoyltransferase
Probab=99.77 E-value=3.8e-17 Score=191.84 Aligned_cols=256 Identities=16% Similarity=0.187 Sum_probs=168.5
Q ss_pred CCCeEEccCCC-CCCC-CcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 614 NSGLIHMDVDQ-SFLP-IPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 614 ~~~~IdLs~g~-p~~~-~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
+...++|+..+ -.+. +++...++..+++.+|+. .+|.....+.+++.+++++|.+ + .|++++|....
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~---~-ai~~~~G~~an 174 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKP---A-AIVFGMGYATN 174 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCC---c-EEEECCHHHHH
Confidence 45677776543 1222 233444555555555542 2466677778888888888843 2 69999987766
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh-------cCC----CcEEEEE
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE-------TVK----KPWVYIS 753 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~-------~~~----~~~vil~ 753 (903)
+ .++.+++++||.|++++|+|+.+...++..|++++.++.+ |.+.+++.++ +++ +++++++
T Consensus 175 ~-~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livv 246 (489)
T PLN02483 175 S-TIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIV 246 (489)
T ss_pred H-HHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEE
Confidence 6 5677899999999999999999999999999999999864 3455544443 111 2355565
Q ss_pred CCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccc
Q 043334 754 GPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLT 833 (903)
Q Consensus 754 ~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~ 833 (903)
.+..|++|.+.+ +++|+++|+++|++||+||+|+...++..... ....++-.+ .+++|+++||||+||+
T Consensus 247 e~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g------~~~~~~v~~--~~~dI~~~SfSKs~g~ 315 (489)
T PLN02483 247 EGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRG------VCELLGVDP--ADVDIMMGTFTKSFGS 315 (489)
T ss_pred CCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCc------hHHhcCCCc--ccCcEEEEecchhccc
Confidence 554599999976 88999999999999999999974333322211 111111111 2578999999999998
Q ss_pred ccceeeEEEeCcHHHHHHHHhCCC-----CCCCcHHHHHHHHHHHhc---ccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 834 GALKFGFLVLNHPQLVDAFSSFPG-----LSKPHSTVRYAIKKLLGL---RERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 834 ~GlRiG~lv~~~~~li~~l~~~~~-----~~~~s~~~Q~aa~~~L~~---~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+| ||++++++ +++.+..... ...++...|. +.++|+. .++ .++..+.++.+++|++++.
T Consensus 316 ~G---G~i~~~~~-li~~l~~~~~~~~~~~~~~p~~~~~-~~aaL~~l~~~~g-----~~~~~~~~~~l~~~~~~l~ 382 (489)
T PLN02483 316 CG---GYIAGSKE-LIQYLKRTCPAHLYATSMSPPAVQQ-VISAIKVILGEDG-----TNRGAQKLAQIRENSNFFR 382 (489)
T ss_pred Cc---eEEEcCHH-HHHHHHHhCccccccCCcCHHHHHH-HHHHHHHHHhCcc-----ccchHHHHHHHHHHHHHHH
Confidence 88 99999887 9999987532 1223344443 4444421 111 1233445666777777654
No 148
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=4.2e-17 Score=186.74 Aligned_cols=265 Identities=9% Similarity=0.026 Sum_probs=186.4
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccC--CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQN--MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~--~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..| ...++ ..+.+.+++.+.+.+.. ......+....+++.+.+..+ . + ++++++|+++++.
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~--~-~v~~~~sGseA~~ 102 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--A--D-KVFFTNSGAEAVE 102 (389)
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--C--C-EEEEcCCcHHHHH
Confidence 467788998765 23333 57788999988876521 111234556677888877542 2 2 7999999999999
Q ss_pred HHHHHh----ccCCC----eEEEcCCCcHHHHHHHHHcCCEEEEecCC-C-CCCcc----cCHHHHHHHhhcCCCcEEEE
Q 043334 687 KLVLCC----ILEGG----TLCFPAGSNGNYVSAARFLKANIVNIPTE-S-EVGFK----MTEKTLVTILETVKKPWVYI 752 (903)
Q Consensus 687 ~ll~~l----~~pGD----~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~-~-~~~f~----ld~~~L~~~l~~~~~~~vil 752 (903)
.++.+. ..+|| +|++.+++|.++...+...+......+.. + ..++. .|++.+++.+++++ ++|++
T Consensus 103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~aviv 181 (389)
T PRK01278 103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNT-AAILI 181 (389)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCe-EEEEE
Confidence 888776 45676 89999999998877776655443322110 0 12232 58999999987654 46666
Q ss_pred ECCCCCCcc-cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 753 SGPTINPTG-LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 753 ~~P~~NPTG-~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
+.+ |||+| .+++.+.+++|.++|++||+++|+||+|.++.+.+... . .....-.+ + +.||||.+
T Consensus 182 ep~-~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~---~----~~~~~~~p---d----i~t~sK~l 246 (389)
T PRK01278 182 EPI-QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF---A----HEWAGVTP---D----IMAVAKGI 246 (389)
T ss_pred ecc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce---e----ecccCCCC---C----EEEEehhc
Confidence 655 59999 89999999999999999999999999998776655421 1 01111111 1 35899999
Q ss_pred ccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 832 LTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 832 g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
+ +|+|+||++++++ +++.+..... +.+.+++.|.++.++|+.-.. +.+.+++.++.+.|+++++.+
T Consensus 247 ~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~l 314 (389)
T PRK01278 247 G-GGFPLGACLATEE-AAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILA--PGFLDNVQRMGLYLKQKLEGL 314 (389)
T ss_pred c-CCcceEEEEEcHH-HHhccCCCCCCCCCCccHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHH
Confidence 8 8999999999987 8888765543 667889999999888842111 234567778888888887765
No 149
>PRK02948 cysteine desulfurase; Provisional
Probab=99.77 E-value=6.4e-17 Score=184.55 Aligned_cols=246 Identities=10% Similarity=0.012 Sum_probs=172.6
Q ss_pred EEccCCCCCCCCcHHHHHHHHHHHHccCCCC-C-------chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 618 IHMDVDQSFLPIPSLVKAAIFESFARQNMSE-S-------EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 618 IdLs~g~p~~~~p~~v~~al~~al~~y~~~~-G-------~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
+.|+.+... ++|+.+.+++.+.+..+.... + ..+..+.+++.+++.+|.+.+ +|++|+|+++++..++
T Consensus 2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---~i~~~~g~t~a~~~~~ 77 (381)
T PRK02948 2 IYLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ---GIYFTSGGTESNYLAI 77 (381)
T ss_pred EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC---eEEEeCcHHHHHHHHH
Confidence 455555544 467888999888776532111 1 124466778888888887544 8999999999999888
Q ss_pred HHhc----cCCCeEEEcCCCcHHH---HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCccc
Q 043334 690 LCCI----LEGGTLCFPAGSNGNY---VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGL 762 (903)
Q Consensus 690 ~~l~----~pGD~Vlv~~P~y~~~---~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~ 762 (903)
.+++ ++||.|+++.+.|+.+ ...++..|++++.++++. ++.+|++.+++.+++++ ++|++++|+ ||||.
T Consensus 78 ~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~-~lv~~~~~~-n~tG~ 153 (381)
T PRK02948 78 QSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDT-VLASIQHAN-SEIGT 153 (381)
T ss_pred HHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCC-EEEEEECCc-CCcEe
Confidence 7775 5789999999666654 445677899999999864 46689999999987766 599999998 99999
Q ss_pred CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 763 LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
+++ +++|.++|+++|+++|+|+++. |+..+. . +... +..+++.|+||.+|.+| +|+++
T Consensus 154 ~~~---~~~I~~l~~~~~~~vivD~~~~---~g~~~~---~-------~~~~----~~d~~~~s~~K~~gp~G--~G~l~ 211 (381)
T PRK02948 154 IQP---IAEIGALLKKYNVLFHSDCVQT---FGKLPI---D-------VFEM----GIDSLSVSAHKIYGPKG--VGAVY 211 (381)
T ss_pred ehh---HHHHHHHHHHcCCEEEEEChhh---cccccc---C-------cccC----CCCEEEecHHhcCCCCc--EEEEE
Confidence 998 6788889999999999997653 222221 1 1111 35788999999999888 79999
Q ss_pred eCcHHH-HHHHHhC---C---CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 843 LNHPQL-VDAFSSF---P---GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 843 ~~~~~l-i~~l~~~---~---~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++++ + ...+... . ....++.+.+.++..++.. ..+++++.++.+++.++++
T Consensus 212 ~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~~l 269 (381)
T PRK02948 212 INPQ-VRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAEN-------ILKNMQEESLRFKELRSYF 269 (381)
T ss_pred EcCC-CCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 8765 3 1111100 0 2456778888888888841 1133444455555555444
No 150
>PRK06460 hypothetical protein; Provisional
Probab=99.76 E-value=3.1e-17 Score=186.70 Aligned_cols=170 Identities=12% Similarity=0.103 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCC----CcHHHHHHHHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAG----SNGNYVSAARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P----~y~~~~~~~~~~G~~vv~v~~~~ 727 (903)
+..+.+++.+++..|.+. .+++++| ++++..++.++++|||+|+++.| +|..|...++..|+++..++.+.
T Consensus 45 p~~~~L~~~lA~l~g~~~----~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~ 119 (376)
T PRK06460 45 PTVLELTKKIVELENAEM----GVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGS 119 (376)
T ss_pred ccHHHHHHHHHHHhCCCc----EEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCC
Confidence 345556666666667642 4777666 58999889999999999999975 45566677888999999888642
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
.+.+++.+++++ ++|++++|+ ||||.+++. ++|.++|+++|++||+|++|+.. +... +
T Consensus 120 -------~~~l~~~~~~~t-klV~l~sp~-NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~-~~~~--------~- 177 (376)
T PRK06460 120 -------DNIIEKAKSKRY-DVVFVENIT-NPLLRVVDI---TELSKVCKENGSILIVDATFSTP-INQK--------P- 177 (376)
T ss_pred -------HHHHHHhcCCCc-eEEEEECCC-CCCCcccCH---HHHHHHHHHcCCEEEEECCcCcc-ccCC--------h-
Confidence 234555555555 599999998 999999994 56788889999999999999632 1110 1
Q ss_pred hhhhccCCCCCCceEEEccCchhcccc-cceeeEEEeCcHHHHHHHHhCCC
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTG-ALKFGFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~~li~~l~~~~~ 857 (903)
+. . +..++++|+||.++.. |.|+||++++++ +++.+.+...
T Consensus 178 ---l~-~----~~divv~S~sK~l~G~~~~~~G~~~~~~~-l~~~l~~~~~ 219 (376)
T PRK06460 178 ---LE-L----GADIVVHSASKFLAGHNDVIAGLAAGYGK-LLNVIDQMRR 219 (376)
T ss_pred ---hh-c----CCCEEEeecceeccCCCCceEEEEecCHH-HHHHHHHHHH
Confidence 11 1 3579999999998632 367999999877 9898887654
No 151
>PRK07179 hypothetical protein; Provisional
Probab=99.76 E-value=2.7e-16 Score=181.10 Aligned_cols=216 Identities=13% Similarity=0.107 Sum_probs=161.9
Q ss_pred CCCCCeEEccCCC-CCCCCcHHHHHHHHHHHHccCCC-------CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 612 TPNSGLIHMDVDQ-SFLPIPSLVKAAIFESFARQNMS-------ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 612 ~~~~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~~~-------~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
.++..+++++.++ -++...+.+++++.+.+.+++.. .+..+...++++.+++.+|.+ .+++++|+++
T Consensus 51 ~~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~-----~~~~~~sG~~ 125 (407)
T PRK07179 51 TPGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFE-----SCLLCQSGWA 125 (407)
T ss_pred CCCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCC-----cEEEECCHHH
Confidence 3566788886543 45567788999999988765211 112246677888888888763 3677888899
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
+...++.+++.+||.|++..+.|......++..|++++.++. .|++.+++.+++.++++|++++|+ ||||.+
T Consensus 126 An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~-n~tG~i 197 (407)
T PRK07179 126 ANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVY-STTGTI 197 (407)
T ss_pred HHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCC-CCCCcc
Confidence 999999999999999999999999988888889998877653 478999999876444578888897 999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
++ +++|.++|+++|+++|+||+|+...++.... +.+..++-. ....+++.|+||.+| .|+||+++
T Consensus 198 ~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~------g~~~~~~~~---~~vdi~~~S~sK~~g---~~~G~l~~ 262 (407)
T PRK07179 198 AP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGA------GLVAELGLT---SRVHFITASLAKAFA---GRAGIITC 262 (407)
T ss_pred cc---HHHHHHHHHHcCCEEEEECcccccCcCCCCC------chHHhcCCC---CCCCEEEeechHhhh---ccCeEEEe
Confidence 99 7788999999999999999997443432221 112222211 123588999999986 37999999
Q ss_pred CcHHHHHHHHhCC
Q 043334 844 NHPQLVDAFSSFP 856 (903)
Q Consensus 844 ~~~~li~~l~~~~ 856 (903)
+++ +++.+....
T Consensus 263 ~~~-~~~~~~~~~ 274 (407)
T PRK07179 263 PRE-LAEYVPFVS 274 (407)
T ss_pred CHH-HHHHHHHhC
Confidence 876 888776543
No 152
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.76 E-value=7.4e-17 Score=182.89 Aligned_cols=202 Identities=13% Similarity=0.164 Sum_probs=158.0
Q ss_pred CCeEEccCCCCCC---CCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 615 SGLIHMDVDQSFL---PIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 615 ~~~IdLs~g~p~~---~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
..+||.+.--..+ .+|+++++++.++.+.|. +.+++++++++++++.+|.+ ++++|+|+++++..++.+
T Consensus 8 ~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~a~~~g~~-----~~~~~~g~t~al~~al~a 79 (363)
T TIGR01437 8 KKVINASGKMTILGVSTVSDEVADAQKRGAQNYF---EIKELVNKTGEYIANLLGVE-----DAVIVSSASAGIAQSVAA 79 (363)
T ss_pred ceEEECCcEeecCCCCCCCHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHhhCCC-----eEEEEcCHHHHHHHHHHH
Confidence 3455554332222 268899999999876653 57889999999999998853 589999999999999999
Q ss_pred hccCCC---------------eEEEcCCCcHHH----HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEE
Q 043334 692 CILEGG---------------TLCFPAGSNGNY----VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYI 752 (903)
Q Consensus 692 l~~pGD---------------~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil 752 (903)
++++|| +|+++.|.|..| ...+...|++++.++.+ +.+|++.++++++++++.++++
T Consensus 80 l~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~~t~ai~~v 155 (363)
T TIGR01437 80 VITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITEKTAAILYI 155 (363)
T ss_pred HhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcChhceEEEEE
Confidence 999998 999999888876 46778899999999863 3599999999999888533446
Q ss_pred ECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcc
Q 043334 753 SGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKML 832 (903)
Q Consensus 753 ~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g 832 (903)
++|+ ||+|.+.+ +++|.++|+++|+++|+|++|+. . +..... + +..+++.|++|.+
T Consensus 156 ~~~~-~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~------~-----~~~~~~-~-------g~D~~~~S~~K~l- 211 (363)
T TIGR01437 156 KSHH-CVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE------D-----LQKYYR-L-------GADLVIYSGAKAI- 211 (363)
T ss_pred ecCC-CCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC------c-----hHHHHH-c-------CCCEEEEeCCccc-
Confidence 7887 99999999 67789999999999999999951 1 001111 1 1357889999976
Q ss_pred cccceeeEEEeCcHHHHHHHHh
Q 043334 833 TGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 833 ~~GlRiG~lv~~~~~li~~l~~ 854 (903)
+|+|.||++++++ +++.+..
T Consensus 212 -~gp~~G~l~~~~~-~i~~~~~ 231 (363)
T TIGR01437 212 -EGPTSGLVLGKKK-YIEWVKL 231 (363)
T ss_pred -CCCceEEEEEcHH-HHHHHHh
Confidence 5889999998776 7777654
No 153
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.75 E-value=1e-16 Score=184.56 Aligned_cols=269 Identities=14% Similarity=0.113 Sum_probs=187.9
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccC---CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQN---MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~---~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..|...||+..| ...++ .++.+.+++.+.+.... ...+..+....+++.+++.+|...+ ++++++|+++++
T Consensus 33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~v~~~~sgsea~ 109 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLD---KVFFVNSGTEAV 109 (413)
T ss_pred CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCC---EEEEcCcHHHHH
Confidence 467789999876 34455 78889999988875432 1223577888999999998886433 899999999999
Q ss_pred HHHHHHhc--cCCCeEEEcCCCcHHHHHHHHHcC-------------CEEEEecCCCC----CCcccCHHHHHHHhhcC-
Q 043334 686 NKLVLCCI--LEGGTLCFPAGSNGNYVSAARFLK-------------ANIVNIPTESE----VGFKMTEKTLVTILETV- 745 (903)
Q Consensus 686 ~~ll~~l~--~pGD~Vlv~~P~y~~~~~~~~~~G-------------~~vv~v~~~~~----~~f~ld~~~L~~~l~~~- 745 (903)
..++..+. .+++.|++.+++|..+.......+ .+++.+|.+.. ..+..|++.+++.+++.
T Consensus 110 ~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 189 (413)
T cd00610 110 EAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHP 189 (413)
T ss_pred HHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCC
Confidence 99888774 578999999999988655443322 23566665421 12455899999988762
Q ss_pred CCcEEEEECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEE
Q 043334 746 KKPWVYISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLL 824 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l 824 (903)
.+..+++++|.+|++|.++ +.+++++|.++|+++|+++|+||+|.++...+... ........+ -+
T Consensus 190 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-------~~~~~~~~~-------d~ 255 (413)
T cd00610 190 EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-------AFEHFGVEP-------DI 255 (413)
T ss_pred CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-------hHhhcCCCC-------Ce
Confidence 1236777777768889876 77789999999999999999999998654333321 111111111 24
Q ss_pred ccCchhcccccceeeEEEeCcHHHHHHH--HhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 825 GGLSLKMLTGALKFGFLVLNHPQLVDAF--SSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 825 ~S~SK~~g~~GlRiG~lv~~~~~li~~l--~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
.||||.++. |+|+||++++++ +++.+ .... .+.+.+.+.|.++.++|+.-.. +.+.+++.++.+.++++.+.
T Consensus 256 ~t~sK~l~~-g~~~g~~~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~ 331 (413)
T cd00610 256 VTLGKGLGG-GLPLGAVLGREE-IMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE--EGLLENAAELGEYLRERLRE 331 (413)
T ss_pred EEEcccccC-ccccEEEEEcHH-HHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH
Confidence 589999985 899999999876 88886 3332 2566778888888877742111 23456666777777666554
Q ss_pred H
Q 043334 901 L 901 (903)
Q Consensus 901 l 901 (903)
+
T Consensus 332 ~ 332 (413)
T cd00610 332 L 332 (413)
T ss_pred H
Confidence 3
No 154
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=1.1e-16 Score=183.76 Aligned_cols=195 Identities=15% Similarity=0.131 Sum_probs=147.7
Q ss_pred cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHH----HHHHHHHcCCE
Q 043334 644 QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGN----YVSAARFLKAN 719 (903)
Q Consensus 644 y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~----~~~~~~~~G~~ 719 (903)
|.+..+..+.++.+++.+++..|.+ + .+++++| ++++..++.++++|||.|+++.|+|+. +...++..|.+
T Consensus 52 ~~y~R~~~p~~~~Le~~lA~l~g~~---~-~v~~~sG-~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~ 126 (405)
T PRK08776 52 YDYTRSGNPTRDLLGEALAELEGGA---G-GVITATG-MGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFA 126 (405)
T ss_pred CcccCCCChHHHHHHHHHHHHhCCC---c-eEEEcCH-HHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcE
Confidence 4445555566778888888888853 2 5777676 699999999999999999999999987 44555667888
Q ss_pred EEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCC
Q 043334 720 IVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGW 799 (903)
Q Consensus 720 vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~ 799 (903)
++.++. .|++.+++.+++++ ++|++++|+ ||||.+.+ +++|+++|+++|++||+|++|..... ..
T Consensus 127 v~~v~~-------~d~~~l~~~i~~~t-klV~l~~P~-NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~---~~ 191 (405)
T PRK08776 127 LITADL-------TDPRSLADALAQSP-KLVLIETPS-NPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL---QK 191 (405)
T ss_pred EEEECC-------CCHHHHHHhcCcCC-eEEEEECCC-CCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc---CC
Confidence 888875 36889999987766 599999998 99999965 88999999999999999999963211 10
Q ss_pred CCCchhhhhhhhccCCCCCCceEEEccCchhcccc-cceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 800 GGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG-ALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 800 s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
+ +. + +..+++.|.||.++.+ |...|+++++++++.+.+..... ..+++.+.++++...+
T Consensus 192 ------p-l~-~-------gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl 253 (405)
T PRK08776 192 ------P-LE-F-------GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGL 253 (405)
T ss_pred ------c-cc-c-------cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 1 11 1 1348999999999766 57889999877668887765443 3346677776666555
No 155
>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases.; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A ....
Probab=99.74 E-value=1.6e-17 Score=168.27 Aligned_cols=141 Identities=30% Similarity=0.469 Sum_probs=111.0
Q ss_pred cccCCcccCc--chhH-HHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcc
Q 043334 2 MVIPSIFIPE--DWSF-TFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNA 78 (903)
Q Consensus 2 ~~~p~vfiP~--~w~~-~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~g 78 (903)
...||||.|. +... -+.+.+... ++.+|||+|||+|.+++.+++..+..+|+++|+|+.+++.+++|+..|+
T Consensus 5 ~~~~gvFs~~~~d~~t~lL~~~l~~~-----~~~~vLDlG~G~G~i~~~la~~~~~~~v~~vDi~~~a~~~a~~n~~~n~ 79 (170)
T PF05175_consen 5 ITHPGVFSPPRLDAGTRLLLDNLPKH-----KGGRVLDLGCGSGVISLALAKRGPDAKVTAVDINPDALELAKRNAERNG 79 (170)
T ss_dssp EEETTSTTTTSHHHHHHHHHHHHHHH-----TTCEEEEETSTTSHHHHHHHHTSTCEEEEEEESBHHHHHHHHHHHHHTT
T ss_pred EECCCeeCCCCCCHHHHHHHHHHhhc-----cCCeEEEecCChHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC
Confidence 4689999975 3333 445555554 3579999999999999999999888799999999999999999999998
Q ss_pred cccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccc
Q 043334 79 LDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQG 158 (903)
Q Consensus 79 l~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~ 158 (903)
++ +++++.+|+.+.... ++||+|++|||+...
T Consensus 80 ~~----------------~v~~~~~d~~~~~~~--~~fD~Iv~NPP~~~~------------------------------ 111 (170)
T PF05175_consen 80 LE----------------NVEVVQSDLFEALPD--GKFDLIVSNPPFHAG------------------------------ 111 (170)
T ss_dssp CT----------------TEEEEESSTTTTCCT--TCEEEEEE---SBTT------------------------------
T ss_pred cc----------------ccccccccccccccc--cceeEEEEccchhcc------------------------------
Confidence 72 499999999887653 389999999996532
Q ss_pred cccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHH
Q 043334 159 FVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGV 198 (903)
Q Consensus 159 ~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~ 198 (903)
.+.|...+.++++++.++|||||.+++..........
T Consensus 112 ---~~~~~~~~~~~i~~a~~~Lk~~G~l~lv~~~~~~~~~ 148 (170)
T PF05175_consen 112 ---GDDGLDLLRDFIEQARRYLKPGGRLFLVINSHLGYER 148 (170)
T ss_dssp ---SHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHH
T ss_pred ---cccchhhHHHHHHHHHHhccCCCEEEEEeecCCChHH
Confidence 2335556779999999999999999887776655444
No 156
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.74 E-value=9e-17 Score=184.50 Aligned_cols=258 Identities=11% Similarity=0.078 Sum_probs=178.0
Q ss_pred CCCCCeEEccCC--CCCCCC-cHHHHHHHHHHHHccCCC--CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLPI-PSLVKAAIFESFARQNMS--ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~~-p~~v~~al~~al~~y~~~--~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..| .+.++. ++.+.+++.+.+.++... .-..+...++++++++.+|.+ .++ ++++++|+++++.
T Consensus 40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~-~v~~~~sgsea~~ 117 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAP-EGG-RVFFCNSGAEANE 117 (398)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCC-CCC-EEEEeCchHHHHH
Confidence 467789999876 344555 688999999988764321 111233467888898887743 234 8999999999999
Q ss_pred HHHHHhccCC-CeEEEcCCCcHHHHHHHHH-cCCE------------EEEecCCCCCCcccCHHHHHHHhhcCCCcEEEE
Q 043334 687 KLVLCCILEG-GTLCFPAGSNGNYVSAARF-LKAN------------IVNIPTESEVGFKMTEKTLVTILETVKKPWVYI 752 (903)
Q Consensus 687 ~ll~~l~~pG-D~Vlv~~P~y~~~~~~~~~-~G~~------------vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil 752 (903)
.++.....+| +.|+..+++|..+...+.. .|.. +..+|. .|++.+++.+.++. ++|++
T Consensus 118 ~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~-~avii 189 (398)
T PRK03244 118 AAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDT-AAVFL 189 (398)
T ss_pred HHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCe-EEEEE
Confidence 9998777777 4677777888776544432 2221 222221 37899998886544 57888
Q ss_pred ECCCCCCcccCCCHHH-HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 753 SGPTINPTGLLYSNKE-IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 753 ~~P~~NPTG~v~s~ee-l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
+.+ |||||.+++.++ +++|.++|++||+++|+||+|.++-..+... . .....-.+ . +.+|||.+
T Consensus 190 ep~-~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~---~----~~~~~~~p----D---i~t~sK~l 254 (398)
T PRK03244 190 EPI-QGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF---A----HQHDGVTP----D---VVTLAKGL 254 (398)
T ss_pred ecc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH---h----hhhhCCCC----C---EEEEchhh
Confidence 777 499999997655 9999999999999999999998755444321 0 11111112 2 34889999
Q ss_pred ccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 832 LTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 832 g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
+ +|+|+||++++++ +++.+.... .+.+.+.+.|.++.++|+.-.. +.+.+++.++++.++++.
T Consensus 255 ~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L 319 (398)
T PRK03244 255 G-GGLPIGACLAFGP-AADLLTPGLHGSTFGGNPVACAAALAVLDTIAS--EGLLENAERLGEQLRAGI 319 (398)
T ss_pred h-CCcccEEEEEcHH-HHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHH
Confidence 8 8999999999987 888886532 2667889999999999852111 234455555555554443
No 157
>PRK14967 putative methyltransferase; Provisional
Probab=99.74 E-value=7.2e-17 Score=170.66 Aligned_cols=174 Identities=17% Similarity=0.276 Sum_probs=131.3
Q ss_pred CcccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccc
Q 043334 1 MMVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALD 80 (903)
Q Consensus 1 ~~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~ 80 (903)
+.+.|++|.|...+..+.+.+.... ..++.+|||+|||+|.+++.+++. +..+|+|+|+|+.+++.+++|+..+++
T Consensus 9 ~~~~~g~~~p~~ds~~l~~~l~~~~--~~~~~~vLDlGcG~G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~- 84 (223)
T PRK14967 9 LLRAPGVYRPQEDTQLLADALAAEG--LGPGRRVLDLCTGSGALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGV- 84 (223)
T ss_pred eecCCCCcCCCCcHHHHHHHHHhcc--cCCCCeEEEecCCHHHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCC-
Confidence 4689999999877776777766543 235689999999999999998875 345999999999999999999987765
Q ss_pred cCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccc
Q 043334 81 EKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFV 160 (903)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v 160 (903)
+++++++|+.+.... ++||+|++||||............ ....|.
T Consensus 85 ----------------~~~~~~~d~~~~~~~--~~fD~Vi~npPy~~~~~~~~~~~~-----------------~~~~~~ 129 (223)
T PRK14967 85 ----------------DVDVRRGDWARAVEF--RPFDVVVSNPPYVPAPPDAPPSRG-----------------PARAWD 129 (223)
T ss_pred ----------------eeEEEECchhhhccC--CCeeEEEECCCCCCCCcccccccC-----------------hhHhhh
Confidence 588999999875433 389999999999876543211100 001112
Q ss_pred cccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 161 EDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 161 ~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.+.++...+..+++++.++|||||++++............+.+++.||.....
T Consensus 130 ~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 182 (223)
T PRK14967 130 AGPDGRAVLDRLCDAAPALLAPGGSLLLVQSELSGVERTLTRLSEAGLDAEVV 182 (223)
T ss_pred CCCcHHHHHHHHHHHHHHhcCCCcEEEEEEecccCHHHHHHHHHHCCCCeEEE
Confidence 24566777889999999999999999997766544445567888889876555
No 158
>COG4123 Predicted O-methyltransferase [General function prediction only]
Probab=99.74 E-value=7e-17 Score=169.54 Aligned_cols=199 Identities=17% Similarity=0.239 Sum_probs=144.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
..++|||+|||+|.+++.+|++.+.++++|||++++|.+.|++|++.|+++ ++++++++|+.++.
T Consensus 44 ~~~~IlDlGaG~G~l~L~la~r~~~a~I~~VEiq~~~a~~A~~nv~ln~l~---------------~ri~v~~~Di~~~~ 108 (248)
T COG4123 44 KKGRILDLGAGNGALGLLLAQRTEKAKIVGVEIQEEAAEMAQRNVALNPLE---------------ERIQVIEADIKEFL 108 (248)
T ss_pred cCCeEEEecCCcCHHHHHHhccCCCCcEEEEEeCHHHHHHHHHHHHhCcch---------------hceeEehhhHHHhh
Confidence 478999999999999999999988899999999999999999999999883 79999999999886
Q ss_pred cCCC-CceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RDHD-IQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~~-~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... .+||+|||||||+..+.. .-..... .+++++..- .+..+++.+.+.|||||.+.+
T Consensus 109 ~~~~~~~fD~Ii~NPPyf~~~~~-~~~~~~~---------~~Ar~e~~~----------~le~~i~~a~~~lk~~G~l~~ 168 (248)
T COG4123 109 KALVFASFDLIICNPPYFKQGSR-LNENPLR---------AIARHEITL----------DLEDLIRAAAKLLKPGGRLAF 168 (248)
T ss_pred hcccccccCEEEeCCCCCCCccc-cCcChhh---------hhhhhhhcC----------CHHHHHHHHHHHccCCCEEEE
Confidence 5443 259999999999976654 0111111 011111111 145889999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeeccCCcceeEEecccCCCcccHHHHHHhhh
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEKNSPHRFEFFMGLSGDLPICARTAWAYGK 268 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~~~~~~f~f~~~~~~~~p~~~~~~~~~~~ 268 (903)
.+......+. ..++++.+|...++...+-. . ......-+++.-+++..+.
T Consensus 169 V~r~erl~ei-~~~l~~~~~~~k~i~~V~p~-~------~k~A~~vLv~~~k~~~~~l---------------------- 218 (248)
T COG4123 169 VHRPERLAEI-IELLKSYNLEPKRIQFVYPK-I------GKAANRVLVEAIKGGKSGL---------------------- 218 (248)
T ss_pred EecHHHHHHH-HHHHHhcCCCceEEEEecCC-C------CCcceEEEEEEecCCCCCc----------------------
Confidence 9988776666 46888888888776433200 0 1222444566666654333
Q ss_pred cCcceeeeeeeeeccccCchhHHHHHHH
Q 043334 269 AGGRISHALSVYSCQLHQPNQVKKIFKF 296 (903)
Q Consensus 269 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 296 (903)
.+.--|-+++...+++.+++++..-
T Consensus 219 ---~~~ppLii~~e~g~yt~e~~~i~~~ 243 (248)
T COG4123 219 ---KVLPPLIIHDEDGEYTEEVKEIYQG 243 (248)
T ss_pred ---eecCCEEEECCCCCcCHHHHHHHhh
Confidence 3444566777777788888887653
No 159
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.74 E-value=2.4e-16 Score=178.01 Aligned_cols=199 Identities=13% Similarity=0.119 Sum_probs=150.8
Q ss_pred CCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCc
Q 043334 627 LPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSN 706 (903)
Q Consensus 627 ~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y 706 (903)
.+.|+.+.+++.+....+. ..+..++.+.+++.+++.+|.+.. + .+++++|+++++..++.+++.+||+|+++.++|
T Consensus 8 ~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~la~~~g~~~~-~-~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~ 84 (356)
T cd06451 8 SNVPPRVLKAMNRPMLGHR-SPEFLALMDEILEGLRYVFQTENG-L-TFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGV 84 (356)
T ss_pred cCCCHHHHHHhCCCccCCC-CHHHHHHHHHHHHHHHHHhcCCCC-C-EEEEecCcHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 3567778887765432221 123445577888999999998422 2 578888889999999999999999999999887
Q ss_pred HH--HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEE
Q 043334 707 GN--YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARV 783 (903)
Q Consensus 707 ~~--~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~V 783 (903)
+. +...++..|++++.+|.++ ++.+|++++++.+++ ++ +++++++|+ ||||.+++ +++|.++|+++|++|
T Consensus 85 ~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~-~~v~i~~~~-~~~G~~~~---~~~i~~~a~~~~~~l 157 (356)
T cd06451 85 FGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDI-KAVTLTHNE-TSTGVLNP---LEGIGALAKKHDALL 157 (356)
T ss_pred hhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCC-CEEEEeccC-CCcccccC---HHHHHHHHHhcCCEE
Confidence 65 5677888999999999864 357999999999986 55 599999997 99999998 667888889999999
Q ss_pred EEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHh
Q 043334 784 VIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 784 I~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~ 854 (903)
|+|++|+ ++.... + .. .. +..+++.|.+|.++.| .++||++.+++ +++.+..
T Consensus 158 i~D~~~~---~g~~~~---~----~~---~~----~~d~~~~s~~K~l~~p-~g~G~l~~~~~-~~~~~~~ 209 (356)
T cd06451 158 IVDAVSS---LGGEPF---R----MD---EW----GVDVAYTGSQKALGAP-PGLGPIAFSER-ALERIKK 209 (356)
T ss_pred EEeeehh---ccCccc---c----cc---cc----CccEEEecCchhccCC-CCcceeEECHH-HHHHHHh
Confidence 9999874 222211 1 11 11 2346678899999854 35899999887 8777763
No 160
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.74 E-value=9.8e-17 Score=183.48 Aligned_cols=168 Identities=14% Similarity=0.144 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH----HHHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS----AARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~----~~~~~G~~vv~v~~~~ 727 (903)
+..+++++.+++.+|.+ ++++++|+++++..++.+++++||+|+++.+.|++... .++..|++++.++++
T Consensus 61 p~~~~le~~la~l~g~~-----~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 134 (390)
T PRK08133 61 PTVTMFQERLAALEGAE-----ACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT- 134 (390)
T ss_pred hHHHHHHHHHHHHhCCC-----cEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC-
Confidence 34666888888877753 47888889999999999999999999999998876443 456789999999873
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
|++.+++++++++ ++|++++|+ ||||.+.+ +++|.++|+++|++||+|++|....+.. +
T Consensus 135 ------d~~~l~~~i~~~t-klV~ie~p~-NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~---------p- 193 (390)
T PRK08133 135 ------DLDAWRAAVRPNT-KLFFLETPS-NPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ---------P- 193 (390)
T ss_pred ------CHHHHHHhcCcCC-eEEEEECCC-CCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC---------c-
Confidence 6889999998877 599999998 99999987 7899999999999999999985322211 1
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceee-EEEeCcHHHHHHHHhC
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVLNHPQLVDAFSSF 855 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~~~~~li~~l~~~ 855 (903)
+. + +..++++|+||.++.+|+|+| |++++++ +++.+...
T Consensus 194 l~-~-------g~Divv~S~sK~~~g~g~~~GG~vv~~~~-~~~~~~~~ 233 (390)
T PRK08133 194 LK-L-------GADVVIHSATKYLDGQGRVLGGAVVGSKE-LMEEVFGF 233 (390)
T ss_pred hh-h-------CCcEEEeecceeecCCcceEeEEEEcCHH-HHHHHHHH
Confidence 11 1 245889999999999999985 5666665 76666543
No 161
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.73 E-value=5.7e-16 Score=178.06 Aligned_cols=211 Identities=15% Similarity=0.144 Sum_probs=159.5
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHcc--CCCCCc-------hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQ--NMSESE-------IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y--~~~~G~-------~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
.+.+++.|+.+... ++|+.+.+++.+.+... .+..|. .+..+.+++.+++.+|.+. ++ +|++|+|+++
T Consensus 15 ~~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~-~~-~v~~~~g~t~ 91 (403)
T TIGR01979 15 NGKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAAS-DE-EIVFTRGTTE 91 (403)
T ss_pred CCCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCC-CC-eEEEeCCHHH
Confidence 35678999999877 46778888888776542 222222 1233456667777778762 23 8999999999
Q ss_pred HHHHHHHHh----ccCCCeEEEcCCCcHH----HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECC
Q 043334 684 LFNKLVLCC----ILEGGTLCFPAGSNGN----YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGP 755 (903)
Q Consensus 684 al~~ll~~l----~~pGD~Vlv~~P~y~~----~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P 755 (903)
++..++.++ +++||.|+++++.|+. +...++..|++++.++++. ++.+|++.+++.+++++ +++++++|
T Consensus 92 ~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~-~lv~~~~~ 168 (403)
T TIGR01979 92 SINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDD--DGTLDLDDLEKLLTEKT-KLVAITHV 168 (403)
T ss_pred HHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCC--CCCCCHHHHHHHhccCC-eEEEEEcc
Confidence 999888775 5789999999998765 3456677899999999873 45689999999998776 58999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccc
Q 043334 756 TINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGA 835 (903)
Q Consensus 756 ~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G 835 (903)
+ ||||.+++ +++|.++|+++|+++|+|++|+... .+ .+ +... +..+++.|++|.+|.+|
T Consensus 169 ~-~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~---~~---~~-------~~~~----~~d~~~~s~~K~~gp~G 227 (403)
T TIGR01979 169 S-NVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH---MP---VD-------VQAL----DCDFYVFSGHKMYGPTG 227 (403)
T ss_pred c-ccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc---cc---cC-------cccc----CCCEEEEecccccCCCC
Confidence 8 99999999 7788999999999999999985311 11 00 1111 35789999999988777
Q ss_pred ceeeEEEeCcHHHHHHHH
Q 043334 836 LKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 836 lRiG~lv~~~~~li~~l~ 853 (903)
+||++++++ +++.+.
T Consensus 228 --~g~l~~~~~-~~~~~~ 242 (403)
T TIGR01979 228 --IGVLYGKEE-LLEQMP 242 (403)
T ss_pred --ceEEEEchH-HHhcCC
Confidence 899999876 776653
No 162
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=2.1e-16 Score=181.05 Aligned_cols=187 Identities=14% Similarity=0.122 Sum_probs=140.0
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH----HHHHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS----AARFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~----~~~~~G~~vv~v~~~ 726 (903)
.+..+.+++.+++..|.+ ..++++++++++..++.+++++||+|+++.|+|+.+.. .+...|++++.++.
T Consensus 63 ~p~~~~le~~lA~l~g~~-----~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~- 136 (398)
T PRK08249 63 NPTVQAFEEKVRILEGAE-----AATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET- 136 (398)
T ss_pred ChHHHHHHHHHHHHhCCC-----eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC-
Confidence 345677888888877753 34444555788988888999999999999999997543 35568999887764
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
.|++.+++++++++ ++|++++|+ ||||.+++ +++|.++|+++|++||+|++|+...+. .+
T Consensus 137 ------~d~e~l~~~i~~~t-klV~ie~p~-NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-~~-------- 196 (398)
T PRK08249 137 ------GDHEQIEAEIAKGC-DLLYLETPT-NPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ-NP-------- 196 (398)
T ss_pred ------CCHHHHHHhcCCCC-eEEEEECCC-CCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC-Cc--------
Confidence 57899999998877 599999998 99999998 777888999999999999999743221 11
Q ss_pred hhhhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
.. . +..++++|+||.++.+|.++ ||++++++ +++.+..... ....+...++.+...|
T Consensus 197 -l~-~-------~~Divv~S~sK~l~g~~~~~gG~vv~~~~-l~~~l~~~~~~~g~~~s~~~a~l~l~~l 256 (398)
T PRK08249 197 -LA-L-------GADLVIHSATKFLSGHADALGGVVCGSKE-LMEQVYHYREINGATMDPMSAYLILRGM 256 (398)
T ss_pred -hh-h-------CCCEEeccCceecCCCCCceEEEEECCHH-HHHHHHHHHHhcCCCCCHHHHHHHHhCc
Confidence 11 1 23478899999998888887 56666554 8888876554 4456666666655555
No 163
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.73 E-value=8.2e-16 Score=176.85 Aligned_cols=232 Identities=12% Similarity=0.083 Sum_probs=166.2
Q ss_pred CCCeEEccCCC-CCCCCcHHHHHHHHHHHHccCCC-------CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 614 NSGLIHMDVDQ-SFLPIPSLVKAAIFESFARQNMS-------ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 614 ~~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~~~-------~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
+.++++|+.++ ..+..+|.+++++.+.+.+|+.. .|..+....+++.+++.+|.+ + .+++++| +++.
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~---~-~l~~~sG-~~an 118 (402)
T TIGR01821 44 AKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKE---S-ALVFTSG-YVAN 118 (402)
T ss_pred CeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCC---e-EEEECch-HHHH
Confidence 35678776543 45668899999999999887542 355666788889999888843 2 5777777 4455
Q ss_pred HHHHHHhcc--CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc---CCCcEEEEECCCCCCc
Q 043334 686 NKLVLCCIL--EGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET---VKKPWVYISGPTINPT 760 (903)
Q Consensus 686 ~~ll~~l~~--pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~---~~~~~vil~~P~~NPT 760 (903)
..++..++. +|+.|+.....|......++..|+++..++. .|.+.+++.++. ...++|++++|+ |||
T Consensus 119 ~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~~~-~~~ 190 (402)
T TIGR01821 119 DATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFESVY-SMD 190 (402)
T ss_pred HHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcCCC-CCC
Confidence 555666654 7787777777787777778888988776653 356777777652 223589999998 999
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
|.+.+ +++|.++|+++|+++|+||+|+...|+..... .....+-. .+..++++||||.||++| ||
T Consensus 191 G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g------~~~~~~~~---~~~div~~t~sKa~g~~G---G~ 255 (402)
T TIGR01821 191 GDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGG------IAERDGLM---HRIDIIEGTLAKAFGVVG---GY 255 (402)
T ss_pred CCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCc------cchhccCC---CCCeEEEEechhhhccCC---ce
Confidence 99998 88889999999999999999974444432210 01111111 124688999999999988 99
Q ss_pred EEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 841 LVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 841 lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
++++++ +++.+..... ..+.+...+.++.++|+
T Consensus 256 i~~~~~-~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~ 292 (402)
T TIGR01821 256 IAASRK-LIDAIRSYAPGFIFTTSLPPAIAAGATASIR 292 (402)
T ss_pred eecCHH-HHHHHHHhCcCceecCcCCHHHHHHHHHHHH
Confidence 999877 8988876543 34466777888888884
No 164
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.73 E-value=1.7e-16 Score=180.09 Aligned_cols=187 Identities=13% Similarity=0.139 Sum_probs=141.0
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH----HHHHHHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY----VSAARFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~~ 726 (903)
.+..+.+++.+++.+|.+. .+ +++|+++++..++ .++.+||+|++++|+|+.. ...++..|++++.++.
T Consensus 51 ~pt~~~le~~la~l~g~~~----~~-~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 123 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQ----GF-ACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT- 123 (366)
T ss_pred CchHHHHHHHHHHHhCCCc----EE-EEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC-
Confidence 3456778888888888753 24 4555577888765 6788999999999999864 4455678999999875
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
.|++.+++++++++ ++|++++|+ ||||. ..++++|+++|+++|++||+|++|....+. .+
T Consensus 124 ------~d~~~l~~~i~~~t-klv~le~P~-NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~~~-~p-------- 183 (366)
T PRK08247 124 ------ASLKAIEQAITPNT-KAIFIETPT-NPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ-RP-------- 183 (366)
T ss_pred ------CCHHHHHHhcccCc-eEEEEECCC-CCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccccc-Cc--------
Confidence 37899999998776 599999998 99764 577999999999999999999999421111 11
Q ss_pred hhhhhccCCCCCCceEEEccCchhcccc-cceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTG-ALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
.. .+..|+++|+||.++.+ +++.||++++++++++.+...+. ..+++...|+++...|
T Consensus 184 -~~--------~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l 244 (366)
T PRK08247 184 -LE--------EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGM 244 (366)
T ss_pred -hh--------cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhcc
Confidence 11 13679999999999743 56999999985558887776553 3456677787777666
No 165
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.73 E-value=7e-16 Score=177.65 Aligned_cols=208 Identities=13% Similarity=0.121 Sum_probs=157.1
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHccC--CCCCc-------hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQN--MSESE-------IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y~--~~~G~-------~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
.+++.|+.+.-. ++|+.+.+++.+.+..+. ...|. .+..+.+++.+++.+|.. +++ +|++|+|+++++
T Consensus 22 ~~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~-~v~~t~g~t~~l 98 (406)
T PRK09295 22 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINAR-SAE-ELVFVRGTTEGI 98 (406)
T ss_pred CceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcC-CCC-eEEEeCCHHHHH
Confidence 357899887755 467788898888775432 11222 233456667777777763 233 899999999999
Q ss_pred HHHHHH----hccCCCeEEEcCCCcHH----HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCC
Q 043334 686 NKLVLC----CILEGGTLCFPAGSNGN----YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTI 757 (903)
Q Consensus 686 ~~ll~~----l~~pGD~Vlv~~P~y~~----~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~ 757 (903)
..++.+ ++++||+|+++++.|++ +...++..|++++.++++. ++.+|++++++++++++ +++++++|+
T Consensus 99 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t-~lv~l~~~~- 174 (406)
T PRK09295 99 NLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERT-RLLAITHVS- 174 (406)
T ss_pred HHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCc-EEEEEecch-
Confidence 998876 46899999999987764 4566678899999999864 45689999999998776 599999998
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce
Q 043334 758 NPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK 837 (903)
Q Consensus 758 NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR 837 (903)
||||.+++ +++|.++|+++|+++|+|++|+.... + .+ +... +..+++.|++|.+|.+|
T Consensus 175 n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~---~---~~-------~~~~----~~D~~~~s~~K~~gp~G-- 232 (406)
T PRK09295 175 NVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHH---P---VD-------VQAL----DCDFYVFSGHKLYGPTG-- 232 (406)
T ss_pred hcccccCC---HHHHHHHHHHcCCEEEEEcccccCcc---c---cC-------chhc----CCCEEEeehhhccCCCC--
Confidence 99999999 77888999999999999999953211 1 11 1111 24688999999888777
Q ss_pred eeEEEeCcHHHHHHH
Q 043334 838 FGFLVLNHPQLVDAF 852 (903)
Q Consensus 838 iG~lv~~~~~li~~l 852 (903)
+||++++++ +++.+
T Consensus 233 ~G~l~~~~~-~~~~~ 246 (406)
T PRK09295 233 IGILYVKEA-LLQEM 246 (406)
T ss_pred cEEEEEchH-hHhhC
Confidence 799999887 76654
No 166
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=99.73 E-value=1.4e-16 Score=162.59 Aligned_cols=166 Identities=22% Similarity=0.257 Sum_probs=126.9
Q ss_pred cccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCc
Q 043334 7 IFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPI 86 (903)
Q Consensus 7 vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~ 86 (903)
||+|+..+..+.+.+... ++++|||+|||+|.++..+++.. .+|+|+|+|++|++.+++|+..++.
T Consensus 1 ~~~~~~d~~~l~~~l~~~-----~~~~vLdlG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~------- 66 (179)
T TIGR00537 1 VYEPAEDSLLLEANLREL-----KPDDVLEIGAGTGLVAIRLKGKG--KCILTTDINPFAVKELRENAKLNNV------- 66 (179)
T ss_pred CCCCCccHHHHHHHHHhc-----CCCeEEEeCCChhHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCC-------
Confidence 689998887666666543 34789999999999999999874 3999999999999999999987764
Q ss_pred chhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccH
Q 043334 87 YDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGL 166 (903)
Q Consensus 87 ~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~ 166 (903)
+++++++|+.+... ++||+|++||||+..++..... ..... ++. ++..+.
T Consensus 67 ----------~~~~~~~d~~~~~~---~~fD~Vi~n~p~~~~~~~~~~~-~~~~~-------------~~~---~~~~~~ 116 (179)
T TIGR00537 67 ----------GLDVVMTDLFKGVR---GKFDVILFNPPYLPLEDDLRRG-DWLDV-------------AID---GGKDGR 116 (179)
T ss_pred ----------ceEEEEcccccccC---CcccEEEECCCCCCCcchhccc-chhhh-------------hhh---cCCchH
Confidence 58899999877542 2899999999998664322110 00000 111 134556
Q ss_pred HHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 167 GLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 167 ~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
..+.++++++.++|||||.+++......+...+.+.+++.||....+...
T Consensus 117 ~~~~~~l~~~~~~Lk~gG~~~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~ 166 (179)
T TIGR00537 117 KVIDRFLDELPEILKEGGRVQLIQSSLNGEPDTFDKLDERGFRYEIVAER 166 (179)
T ss_pred HHHHHHHHhHHHhhCCCCEEEEEEeccCChHHHHHHHHhCCCeEEEEEEe
Confidence 67889999999999999999998877765666678999999998877433
No 167
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.73 E-value=4.1e-16 Score=178.83 Aligned_cols=208 Identities=16% Similarity=0.146 Sum_probs=158.6
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccCC--------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQNM--------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~~--------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
.+.|+.+.+.. +|+.+++++.+.+..+.. ..+..+..+.+++.+++.+|.+.. +|++++|+++++..+
T Consensus 18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~---~v~~~~~~t~~l~~~ 93 (397)
T TIGR01976 18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP---EVVFGANATSLTFLL 93 (397)
T ss_pred eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC---eEEEeCCHHHHHHHH
Confidence 68898877664 677889998888765321 112345567888888888887644 699999999998877
Q ss_pred HHHh---ccCCCeEEEcCCCcHHH----HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcc
Q 043334 689 VLCC---ILEGGTLCFPAGSNGNY----VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTG 761 (903)
Q Consensus 689 l~~l---~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG 761 (903)
+.++ ++|||+|++++|.|++. ...++..|++++.++++.+ ++.+|++.+++.+++++ +++++++|+ ||||
T Consensus 94 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~-~lv~i~~~~-n~tG 170 (397)
T TIGR01976 94 SRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRT-RLVAVTAAS-NTLG 170 (397)
T ss_pred HHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCc-eEEEEeCCC-CCCC
Confidence 7665 68999999999988664 3456778999999998753 46789999999998766 599999998 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL 841 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l 841 (903)
.+++ +++|.++|+++|+++|+|++++. +... .. +... +..+++.|++|.+ |.|+||+
T Consensus 171 ~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~--~~-------~~~~----~~d~~~~s~~K~~---g~~~G~l 227 (397)
T TIGR01976 171 SIVD---LAAITELVHAAGALVVVDAVHYA----PHGL--ID-------VQAT----GADFLTCSAYKFF---GPHMGIL 227 (397)
T ss_pred ccCC---HHHHHHHHHHcCCEEEEehhhhc----cccC--CC-------HHHc----CCCEEEEechhhc---CCceEEE
Confidence 9987 88888999999999999998731 2110 11 1111 2456778999987 4579999
Q ss_pred EeCcHHHHHHHHhC
Q 043334 842 VLNHPQLVDAFSSF 855 (903)
Q Consensus 842 v~~~~~li~~l~~~ 855 (903)
+++++ +++.+...
T Consensus 228 ~~~~~-~~~~l~~~ 240 (397)
T TIGR01976 228 WGRPE-LLMNLPPY 240 (397)
T ss_pred EEcHH-HHhhCCCc
Confidence 99887 87776643
No 168
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=3.4e-16 Score=178.59 Aligned_cols=188 Identities=15% Similarity=0.147 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~ 727 (903)
+.++.+++.+++.+|. . ++++++|+++++..++.++++|||+|++++|+|+.....+ ...|.++..++.
T Consensus 52 pt~~~L~~~lA~l~g~--~---~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-- 124 (386)
T PRK08045 52 PTRDVVQRALAELEGG--A---GAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ-- 124 (386)
T ss_pred ccHHHHHHHHHHHhCC--C---eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCC--
Confidence 4567788888888773 2 5999999999999999999999999999999999644332 224456666542
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
.|++.+++++++++ ++|++++|+ ||||.+++ +++|.++|+++|++||+|++|....+. .+
T Consensus 125 -----~d~e~l~~~l~~~t-klV~l~sP~-NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~-~p--------- 184 (386)
T PRK08045 125 -----GDEQALRAALAEKP-KLVLVESPS-NPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQ-NP--------- 184 (386)
T ss_pred -----CCHHHHHHhcccCC-eEEEEECCC-CCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC-Cc---------
Confidence 57899999998776 599999998 99999998 678888889999999999999643221 11
Q ss_pred hhhhccCCCCCCceEEEccCchhcc-cccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKML-TGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g-~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
+. . +..++++|+||.++ .+|.+.|+++++++++++.+..... ..+.+...++.+...|+
T Consensus 185 l~----~----gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~ 246 (386)
T PRK08045 185 LA----L----GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR 246 (386)
T ss_pred hh----h----CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhc
Confidence 11 1 13489999999996 4667899998866558887765443 45577888888877773
No 169
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.72 E-value=1.4e-15 Score=174.18 Aligned_cols=213 Identities=13% Similarity=0.088 Sum_probs=161.9
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHccCC--------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQNM--------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~--------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
.+.|+++--.-.-|+++.+.+++.+....+.. ..+..+..+.+++.+++.+|.+ ++++++|+++++.
T Consensus 18 ~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~-----~~~~~~g~t~a~~ 92 (387)
T PRK09331 18 EEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD-----EARVTHGAREGKF 92 (387)
T ss_pred ccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCC-----cEEEeCCHHHHHH
Confidence 35666664443446778888888887654321 1122334677777888888863 4778999999999
Q ss_pred HHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC------CCcEEEEECCCCCCc
Q 043334 687 KLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV------KKPWVYISGPTINPT 760 (903)
Q Consensus 687 ~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~------~~~~vil~~P~~NPT 760 (903)
.++.+++++||.|+++.++|......++..|++++.++.+.+.++.+|++.+++.+++. ..++|++++|+ |||
T Consensus 93 ~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~-~~t 171 (387)
T PRK09331 93 AVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVD-GNY 171 (387)
T ss_pred HHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCC-CCC
Confidence 99999999999999999998888778899999999999843346779999999988642 33589999998 999
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
|.+.+ +++|.++|+++|+++|+|++|+.-. .+. + .. .. +..+++.|++|+++ .+.|+||
T Consensus 172 G~~~~---l~~I~~la~~~g~~livD~a~~~g~---~~~---~----~~---~~----g~D~~~~s~~K~l~-~~~~~G~ 230 (387)
T PRK09331 172 GNLAD---AKKVAKVAHEYGIPFLLNGAYTVGR---MPV---D----GK---KL----GADFIVGSGHKSMA-ASAPSGV 230 (387)
T ss_pred ccccc---HHHHHHHHHHcCCEEEEECCcccCC---cCC---C----HH---Hc----CCCEEEeeCccccc-CCCCEEE
Confidence 98876 8899999999999999999996311 111 0 11 11 25688999999997 4569999
Q ss_pred EEeCcHHHHHHHHhC
Q 043334 841 LVLNHPQLVDAFSSF 855 (903)
Q Consensus 841 lv~~~~~li~~l~~~ 855 (903)
++++++ +++.+.+.
T Consensus 231 l~~~~~-~i~~~~~~ 244 (387)
T PRK09331 231 LATTEE-YADKVFRT 244 (387)
T ss_pred EEECHH-HHhhcccc
Confidence 999876 88877554
No 170
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.72 E-value=3.5e-16 Score=178.29 Aligned_cols=185 Identities=16% Similarity=0.143 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~ 727 (903)
+.++.+++.+++.+|. + ++++++|+++++..++.+++++||+|+++.|+|+.+...+ ...|.++..++.
T Consensus 51 p~~~~le~~lA~l~g~----~-~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~-- 123 (382)
T TIGR02080 51 PTRDLLQQALAELEGG----A-GAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ-- 123 (382)
T ss_pred chHHHHHHHHHHHhCC----C-cEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC--
Confidence 4467777778877772 2 6999999999999999999999999999999999654433 333556655532
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
.|++.+++++++++ ++|++++|+ ||||.+++ +++|.++|+++|++||+|++|....+. .+
T Consensus 124 -----~d~~~l~~ai~~~t-klV~l~~p~-NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~-~p--------- 183 (382)
T TIGR02080 124 -----GDEQALRAALAQKP-KLVLIETPS-NPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ-NP--------- 183 (382)
T ss_pred -----CCHHHHHHhcCcCc-eEEEEECCC-CCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC-Cc---------
Confidence 37899999998776 599999998 99999998 678888899999999999999643221 11
Q ss_pred hhhhccCCCCCCceEEEccCchhcc-cccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHH
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKML-TGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKK 871 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g-~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~ 871 (903)
+. + +..++++|+||.++ .+|++.|++++.++++++.+..... ..+.+....+.+..
T Consensus 184 l~-~-------gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr 242 (382)
T TIGR02080 184 LA-L-------GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLR 242 (382)
T ss_pred hh-h-------CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHc
Confidence 11 1 13589999999986 5788999998876668888776544 33455555544433
No 171
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.72 E-value=2e-15 Score=173.92 Aligned_cols=232 Identities=12% Similarity=0.063 Sum_probs=165.1
Q ss_pred CCCeEEccCCC-CCCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 614 NSGLIHMDVDQ-SFLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 614 ~~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
+.++++|+.++ ..+..++.+.+++.+.+.+++. .+|..+....+++.+++.+|.+ + .+++++|+....
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~---~-~~~~~sG~~an~ 120 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKE---A-ALVFTSGYVSND 120 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCC---c-EEEECcHHHHHH
Confidence 46788887554 4567788999999998877643 1355667788889998888842 2 688888865433
Q ss_pred HHHHHHhc--cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc---CCCcEEEEECCCCCCc
Q 043334 686 NKLVLCCI--LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET---VKKPWVYISGPTINPT 760 (903)
Q Consensus 686 ~~ll~~l~--~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~---~~~~~vil~~P~~NPT 760 (903)
.++..++ .+|+.|+.....|......++..|+++..++. .|++.+++.++. ...++|++++|+ |||
T Consensus 121 -~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~v~-s~~ 191 (407)
T PRK09064 121 -ATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFESVY-SMD 191 (407)
T ss_pred -HHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeCCC-CCC
Confidence 3344444 37777777777788777777888888776654 367777777652 222589999998 999
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
|.+.+ +++|.++|+++|+++|+||+|+...|+..... ..... +.. .+.+|+++||||.||++| ||
T Consensus 192 G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g------~~~~~-~~~--~~~div~~t~sKa~g~~G---G~ 256 (407)
T PRK09064 192 GDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGG------IAERD-GLM--DRIDIIEGTLAKAFGVMG---GY 256 (407)
T ss_pred ccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCC------hHHhc-CCC--CCCeEEEEecchhhhccC---ce
Confidence 99988 88889999999999999999974445443311 11111 110 124789999999999888 99
Q ss_pred EEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 841 LVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 841 lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
++++++ +++.+..... ..+.+...+.++.+.|+
T Consensus 257 ~~~~~~-~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~ 293 (407)
T PRK09064 257 IAGSAA-LVDAVRSYAPGFIFTTSLPPAIAAAALASIR 293 (407)
T ss_pred EecCHH-HHHHHHHhCccccccCcCCHHHHHHHHHHHH
Confidence 999877 8888876543 23456667777777774
No 172
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.72 E-value=6.3e-16 Score=177.54 Aligned_cols=185 Identities=14% Similarity=0.106 Sum_probs=138.3
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH----HHHHHHcCCEEEEecCCCC
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY----VSAARFLKANIVNIPTESE 728 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~~~~ 728 (903)
..+.+++.+++.+|.+. .|++++ +++++..++.++++|||+|+++.|+|+.. ...++..|++++.++++
T Consensus 66 ~~~~le~~lA~l~g~~~----~i~~~s-G~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 138 (403)
T PRK07503 66 TLALLEQRMASLEGGEA----AVALAS-GMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-- 138 (403)
T ss_pred hHHHHHHHHHHHhCCCc----EEEEcC-HHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC--
Confidence 45677788888778642 355555 56678888888999999999999988753 33456789999998863
Q ss_pred CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 729 VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
|++.+++.+++++ ++|++++|+ ||||.+.+ +++|.++|+++|++||+|++|+...+ ..+ +
T Consensus 139 -----d~~~l~~~i~~~t-klV~le~p~-NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~-~~~---------l 198 (403)
T PRK07503 139 -----DPAALKAAISDKT-RMVYFETPA-NPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYL-QRP---------L 198 (403)
T ss_pred -----CHHHHHHhcCccC-cEEEEeCCC-CCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc-CCc---------h
Confidence 6899999998776 599999998 99999987 78888899999999999999964322 111 1
Q ss_pred hhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhC--CC--CCCCcHHHHHHHHHHH
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF--PG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~--~~--~~~~s~~~Q~aa~~~L 873 (903)
. . +..++++|+||.++.+| .|.||++++++ ++++++.. .. ..+++...++.+...|
T Consensus 199 ~----~----g~Di~v~S~tK~l~g~gd~~gG~v~~~~~-l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L 259 (403)
T PRK07503 199 E----L----GADLVVHSATKYLGGHGDITAGLVVGGKA-LADRIRLEGLKDMTGAVMSPFDAFLLMRGL 259 (403)
T ss_pred h----h----CCCEEEccccccccCCCceeEEEEEcCHH-HHHHHHhhhHHhCcCCCCCHHHHHHHHcCc
Confidence 1 1 24689999999999776 77888886665 88887643 22 3455666665555544
No 173
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.71 E-value=7.6e-16 Score=177.03 Aligned_cols=241 Identities=13% Similarity=0.088 Sum_probs=173.4
Q ss_pred CCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcH
Q 043334 628 PIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNG 707 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~ 707 (903)
..++.+.+++...... +...+..++++.+++.+++.+|.+.+ ..+++++|+++++..++..++++||+|++++++|+
T Consensus 19 ~~~~~V~~a~~~~~~~-~~~~~~~~~~~~~~~~l~~~~g~~~~--~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~ 95 (401)
T PLN02409 19 NIPERVLRAMNRPNED-HRSPAFPALTKELLEDVKYIFKTKSG--TPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQF 95 (401)
T ss_pred CCCHHHHHHhcCCCCC-CCCHHHHHHHHHHHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCch
Confidence 4577777776554322 23445678899999999999998643 26888889999999999999999999999999887
Q ss_pred HH--HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc----CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCc
Q 043334 708 NY--VSAARFLKANIVNIPTESEVGFKMTEKTLVTILET----VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGA 781 (903)
Q Consensus 708 ~~--~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~----~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i 781 (903)
.. ...++..|++++.++.+.+ ..+|++.+++.+++ ++ ++|+++++. ||||.+++.+++.++++ |+++|+
T Consensus 96 ~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~-k~v~~~~~~-~~tG~~~~~~~i~~l~~-~~~~g~ 170 (401)
T PLN02409 96 SLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKI-KAVCVVHNE-TSTGVTNDLAGVRKLLD-CAQHPA 170 (401)
T ss_pred hHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCc-cEEEEEeec-ccccccCCHHHHHHHHh-hhccCc
Confidence 65 4677889999999998653 33789999999986 44 589999997 99999999777777666 999999
Q ss_pred EEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC----
Q 043334 782 RVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG---- 857 (903)
Q Consensus 782 ~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~---- 857 (903)
++|+|++++. ...+ +. ++.. +..+++.|.+|.+++|. ++||++++++ +++++.....
T Consensus 171 ~~vvD~v~s~---g~~~---------id-~~~~----~~D~~~~s~~K~l~~P~-G~G~l~~~~~-~~~~~~~~~~~~~~ 231 (401)
T PLN02409 171 LLLVDGVSSI---GALD---------FR-MDEW----GVDVALTGSQKALSLPT-GLGIVCASPK-ALEASKTAKSPRVF 231 (401)
T ss_pred EEEEEccccc---CCcc---------cc-cccc----CccEEEEcCccccCcCC-CcceeEECHH-HHHHHhcCCCCCee
Confidence 9999999852 1111 00 1111 24577788899997543 6999999987 7777764321
Q ss_pred ----------------CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 858 ----------------LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 858 ----------------~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
...++...++++..+++.-. +..++.+++.++++++.+
T Consensus 232 ~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~------~~G~e~i~~~~~~l~~~l 285 (401)
T PLN02409 232 FDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIF------EEGLENVIARHARLGEAT 285 (401)
T ss_pred cCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHH------HhhHHHHHHHHHHHHHHH
Confidence 22455566777777774111 123445555555555444
No 174
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.71 E-value=1.3e-15 Score=176.38 Aligned_cols=210 Identities=14% Similarity=0.146 Sum_probs=157.8
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccCC--CCCc-------hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQNM--SESE-------IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~--~~G~-------~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
+.+.+.|+.+... ++|+.+++++.+.+.++.. ..+. .+..+.+++.+++++|.+. ++ +|++|+|++++
T Consensus 30 ~~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~-~v~~t~g~t~a 106 (424)
T PLN02855 30 GSKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINAST-SR-EIVFTRNATEA 106 (424)
T ss_pred CCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCC-CC-EEEEeCCHHHH
Confidence 4568999998876 5788899998887765422 1111 1223456667777778742 23 89999999999
Q ss_pred HHHHHHH----hccCCCeEEEcCCCcHH----HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCC
Q 043334 685 FNKLVLC----CILEGGTLCFPAGSNGN----YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPT 756 (903)
Q Consensus 685 l~~ll~~----l~~pGD~Vlv~~P~y~~----~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~ 756 (903)
+..++.. .+++||+|+++++.|+. +...++..|++++.++++.+ ..+|++.+++.+++++ ++|++++|+
T Consensus 107 l~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t-~lv~i~~~~ 183 (424)
T PLN02855 107 INLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKT-KLVATHHVS 183 (424)
T ss_pred HHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCc-eEEEEeCcc
Confidence 9998876 36899999999997764 55566788999999998653 3489999999998766 599999998
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 757 INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 757 ~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
||||.+++ +++|.++|+++|++||+|++|+. +..+ +. +... +..+++.|++|.+|.+|
T Consensus 184 -n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~---g~~~---------~~-~~~~----~~d~~~~s~~K~~gp~G- 241 (424)
T PLN02855 184 -NVLGSILP---VEDIVHWAHAVGAKVLVDACQSV---PHMP---------VD-VQTL----GADFLVASSHKMCGPTG- 241 (424)
T ss_pred -ccccccCC---HHHHHHHHHHcCCEEEEEhhhhc---CCcC---------CC-chhc----CCCEEEeecccccCCCc-
Confidence 99999999 67888899999999999999842 1111 11 1121 24678999999887666
Q ss_pred eeeEEEeCcHHHHHHHH
Q 043334 837 KFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~ 853 (903)
+||++++++ +++.+.
T Consensus 242 -~G~l~~~~~-~~~~~~ 256 (424)
T PLN02855 242 -IGFLWGKSD-LLESMP 256 (424)
T ss_pred -cEEEEEchh-hhhcCC
Confidence 899999887 776654
No 175
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.71 E-value=6.4e-16 Score=180.23 Aligned_cols=205 Identities=15% Similarity=0.136 Sum_probs=153.6
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHH--HHHccCCCC--CchHHHHHHH---HHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFE--SFARQNMSE--SEIDVTPSIQ---QYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~--al~~y~~~~--G~~~lr~ala---~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..+.++.|.+++..|..+.+.+.. .+..|.+.. -.+..++++. +++++.+|.+.+ ++.+|+|+++++..+
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~---~v~~~~g~t~~~~~~ 145 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVA---NASMYDGATALAEAA 145 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcc---eEEecCcHHHHHHHH
Confidence 577899999998888777665533 233454411 1233566665 566999998765 799999999999988
Q ss_pred HHHhc-cCCCeEEEcCCCcHHHHHHHHH----cCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 689 VLCCI-LEGGTLCFPAGSNGNYVSAARF----LKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 689 l~~l~-~pGD~Vlv~~P~y~~~~~~~~~----~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
+.++. .+||+|+++++.|+.+...++. .|++++.+++++ + .+|++++++++++++ ++|++++| ||||.+
T Consensus 146 ~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t-~~v~l~~p--n~tG~v 219 (447)
T PRK00451 146 LMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDT-AAVVVQYP--NFFGVI 219 (447)
T ss_pred HHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCe-EEEEEECC--CCCCee
Confidence 88874 7999999999999998887654 699999999875 3 699999999998776 58999998 689999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEE--ecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEc---cCchhccccccee
Q 043334 764 YSNKEIENILTVCAKYGARVVI--DTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLG---GLSLKMLTGALKF 838 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~--DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~---S~SK~~g~~GlRi 838 (903)
.+ +++|.++|+++|+++|+ |.... +.. ...... +..++++ +|||.++++|+|+
T Consensus 220 ~~---l~~I~~~a~~~~~~~iv~~d~~~~-----g~~----------~~~~~~----~~D~~~~s~~k~~~~~~~~Gpg~ 277 (447)
T PRK00451 220 ED---LEEIAEIAHAGGALFIVGVDPVSL-----GLL----------KPPGEY----GADIVVGEGQPLGIPLSFGGPYL 277 (447)
T ss_pred CC---HHHHHHHHHHCCCEEEEEcChHHh-----ccC----------CCcccC----CCCEEEECCCcCCCCCCCCCCCc
Confidence 76 88999999999999988 33221 100 000011 2345554 8999999999999
Q ss_pred eEEEeCcHHHHHHH
Q 043334 839 GFLVLNHPQLVDAF 852 (903)
Q Consensus 839 G~lv~~~~~li~~l 852 (903)
||++++++ +++.+
T Consensus 278 G~l~~~~~-~~~~~ 290 (447)
T PRK00451 278 GFFATRKK-LVRQM 290 (447)
T ss_pred hHHHhhHH-HHhhC
Confidence 99999887 77763
No 176
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.71 E-value=5.5e-16 Score=177.22 Aligned_cols=185 Identities=10% Similarity=0.087 Sum_probs=134.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCCC
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTESE 728 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~~ 728 (903)
..+.+++.+++.+|.+ . .+++++|+ +++..++.+++++||+|+++.|.|+.....+ ...|+++..++.
T Consensus 62 t~~~Le~~lA~l~G~~-~---al~~~sG~-~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~--- 133 (386)
T PRK06767 62 TVKLFEERMAVLEGGE-E---ALAFGSGM-AAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM--- 133 (386)
T ss_pred chHHHHHHHHHHhCCC-c---EEEECCHH-HHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC---
Confidence 3577888888888853 2 57777775 5788888889999999999999988765554 334666655543
Q ss_pred CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 729 VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
.|++.+++++++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+|++|+...+. .+ +
T Consensus 134 ----~d~~~l~~~i~~~t-klV~lesp~-NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~-~p---------l 194 (386)
T PRK06767 134 ----ETEADIENKIRPNT-KLIFVETPI-NPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ-RP---------L 194 (386)
T ss_pred ----CCHHHHHHhhCcCc-eEEEEeCCC-CCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC-Cc---------h
Confidence 36899999988776 599999998 99999998 788888899999999999999532221 11 1
Q ss_pred hhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHh-CCC--CCCCcHHHHHHHHHHH
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSS-FPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~-~~~--~~~~s~~~Q~aa~~~L 873 (903)
. . +..+++.|+||.++.+|+|+ ||++++++ +++.+.+ ... ....+...++++...|
T Consensus 195 ~----~----g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~g~~~~~~~a~l~~~~L 254 (386)
T PRK06767 195 E----L----GCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDIGGIMAPFDAWLLLRGL 254 (386)
T ss_pred h----c----CCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHhCCCCCHHHHHHHHcCC
Confidence 1 1 23578899999999999996 89999887 6665533 222 2334555555554444
No 177
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.71 E-value=8e-16 Score=176.51 Aligned_cols=186 Identities=12% Similarity=0.046 Sum_probs=139.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCC----cHHHHHHHHHcCCEEEEecCCCC
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGS----NGNYVSAARFLKANIVNIPTESE 728 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~----y~~~~~~~~~~G~~vv~v~~~~~ 728 (903)
..+.+++.+++.+|.+ +.+++++++.++..++.+++++||+|+++... |..+...++..|++++.++.
T Consensus 71 ~~~~le~~lA~l~g~~-----~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~--- 142 (403)
T PRK07810 71 TVSMFEERLRLIEGAE-----ACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG--- 142 (403)
T ss_pred hHHHHHHHHHHHhCCC-----cEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC---
Confidence 3677888888888854 34555555567777788889999999988744 45556677889999999975
Q ss_pred CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 729 VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
.|++++++++++++ ++|++++|+ ||||.+.+ +++|.++|+++|+++|+|++|+...+.. + +
T Consensus 143 ----~d~~~l~~ai~~~t-klV~~esp~-Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~-~---------~ 203 (403)
T PRK07810 143 ----EDLSQWEEALSVPT-QAVFFETPS-NPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR-G---------L 203 (403)
T ss_pred ----CCHHHHHHhcCcCc-eEEEEECCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC-h---------h
Confidence 37899999998877 599999998 99999987 8889999999999999999996433221 1 1
Q ss_pred hhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
. . +..+++.|++|.++.+|+++ ||++++++.+.+.+..... ...++...++.+...|
T Consensus 204 ~----~----gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L 263 (403)
T PRK07810 204 P----L----GADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGL 263 (403)
T ss_pred h----c----CCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 1 1 24689999999999899998 7888887633334443322 3456777777776666
No 178
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.71 E-value=2.8e-15 Score=168.66 Aligned_cols=242 Identities=16% Similarity=0.151 Sum_probs=167.8
Q ss_pred CCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCC-C
Q 043334 627 LPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAG-S 705 (903)
Q Consensus 627 ~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P-~ 705 (903)
..+++.+.+++..... .......+..+.+++.+++.+|.+.+.. .|++++|+++++..++..++.+||.+++..+ .
T Consensus 8 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~ 84 (355)
T TIGR03301 8 LSTSATVRDAMLVDWC--HWDSEFNDVTDQVRDRLLALAGGDDNHT-CVLLQGSGTFAVEATIGSLVPRDGKLLVLINGA 84 (355)
T ss_pred CCCCHHHHHHhhhhcc--CCCHHHHHHHHHHHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHHHhccCCCCeEEEECCCc
Confidence 3456777777766321 1222345778889999999999875422 6888999999999999999988888665555 4
Q ss_pred cHH-HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCC-CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEE
Q 043334 706 NGN-YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVK-KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARV 783 (903)
Q Consensus 706 y~~-~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~-~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~V 783 (903)
|+. +...++..|.+++.++.+. ++.+|++++++.+++++ .+++++++|+ ||||.+.+ +++|+++|+++++++
T Consensus 85 ~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~-~~~G~~~~---~~~i~~l~~~~~~~l 158 (355)
T TIGR03301 85 YGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHE-TTTGILNP---LEAIAKVARSHGAVL 158 (355)
T ss_pred hhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecC-CcccchhH---HHHHHHHHHHcCCEE
Confidence 554 5677888999999999853 45689999999987543 2367778887 99999987 789999999999999
Q ss_pred EEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceeeEEEeCcHHHHHHHHhCC------
Q 043334 784 VIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGFLVLNHPQLVDAFSSFP------ 856 (903)
Q Consensus 784 I~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~~~~~li~~l~~~~------ 856 (903)
|+|++++ |+..+. + +. .. +..++++|++|.+ |++| +||++++++ +++.+....
T Consensus 159 ivD~~~s---~g~~~~---~----~~---~~----~~d~~~~s~~K~l~~~~G--~g~~~~~~~-~~~~~~~~~~~~~~~ 218 (355)
T TIGR03301 159 IVDAMSS---FGAIPI---D----IE---EL----DVDALIASANKCLEGVPG--FGFVIARRD-LLEASAGNARSLYLD 218 (355)
T ss_pred EEEeccc---cCCccc---c----hh---hc----CccEEEecCCcccccCCc--eeEEEECHH-HHHHhhCCCCCceee
Confidence 9998764 222221 1 11 11 2568899999986 5566 699999987 887766211
Q ss_pred -------------CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 857 -------------GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 857 -------------~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
....++...+.++..++..-.. +.++.+.++.++++++++.
T Consensus 219 ~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~-----~g~~~~~~~~~~~~~~~~~ 272 (355)
T TIGR03301 219 LYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEA-----EGGVPARIARYRRNRELLV 272 (355)
T ss_pred HHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHH-----cccHHHHHHHHHHHHHHHH
Confidence 1234566777776666631000 0124455556666666553
No 179
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=1e-15 Score=175.03 Aligned_cols=169 Identities=14% Similarity=0.182 Sum_probs=128.5
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCCCC
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTESEV 729 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~~~ 729 (903)
...+++.+++++|.+. .+++++| ++++..++.+++++||+|+++.|+|+.....+ +..|+++..++.
T Consensus 63 ~~~Le~~lA~~~g~~~----~i~~~sG-~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~---- 133 (388)
T PRK07811 63 RTALEEQLAALEGGAY----GRAFSSG-MAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL---- 133 (388)
T ss_pred HHHHHHHHHHHhCCCc----eEEeCCH-HHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC----
Confidence 4556666666667653 3666666 79999999999999999999999999654433 235888887765
Q ss_pred CcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhh
Q 043334 730 GFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLS 809 (903)
Q Consensus 730 ~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~ 809 (903)
.|++++++.+++++ ++|++++|+ ||||.+.+ +++|.++|+++|++||+|++|+...+. .+ +.
T Consensus 134 ---~d~e~l~~~i~~~t-klV~ie~p~-NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-~p---------~~ 195 (388)
T PRK07811 134 ---SDLDAVRAAITPRT-KLIWVETPT-NPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ-QP---------LA 195 (388)
T ss_pred ---CCHHHHHHhcCcCC-eEEEEECCC-CCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC-Cc---------hh
Confidence 47899999998877 599999998 99998865 888999999999999999999643221 11 11
Q ss_pred hhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhCCC
Q 043334 810 KLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 810 ~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~~~ 857 (903)
. +..++++|+||.++.+| .+.||++++++++.+.+.....
T Consensus 196 ----~----gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~ 236 (388)
T PRK07811 196 ----L----GADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQN 236 (388)
T ss_pred ----h----CCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHH
Confidence 1 24589999999998755 5679999987667777665443
No 180
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.70 E-value=1.1e-15 Score=175.34 Aligned_cols=185 Identities=12% Similarity=0.134 Sum_probs=134.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCCC
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTESE 728 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~~ 728 (903)
..+.+++.+++++|.+.. ++++ +++.++..++.+++++||+|+++.|.|+.+...+ ...|++++.++.
T Consensus 66 ~~~~Le~~lA~l~G~~~~----~~~~-sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~--- 137 (398)
T PRK07504 66 TVDMFEKRMCALEGAEDA----RATA-SGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG--- 137 (398)
T ss_pred hHHHHHHHHHHHhCCCee----eEec-CHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC---
Confidence 356777888888887643 4455 4456666667778999999999999999765443 467999888852
Q ss_pred CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 729 VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
+|++.+++++++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+|++|+...+. .. .
T Consensus 138 ----~d~e~l~~ai~~~t-klV~lesp~-NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~-~~---------~ 198 (398)
T PRK07504 138 ----LDLDNWEKAVRPNT-KVFFLESPT-NPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ-KP---------L 198 (398)
T ss_pred ----CCHHHHHHhcCcCc-eEEEEECCC-CCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC-Cc---------h
Confidence 68999999998877 599999998 99999998 788888899999999999999643331 11 1
Q ss_pred hhhccCCCCCCceEEEccCchhcccccceee-EEEeCcHHHHH-HHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVLNHPQLVD-AFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~~~~~li~-~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
. + +..++++|+||.++++|+|+| +++++++ +++ .+..... ...++....+.+...|
T Consensus 199 ~-~-------gaDivv~S~sK~l~g~g~~~GG~vv~~~~-~i~~~~~~~~~~~g~~~s~~~A~~~l~~L 258 (398)
T PRK07504 199 E-L-------GAHIVVYSATKHIDGQGRCLGGVVLSDKA-WIEEHLQDYFRHTGPSLSPFNAWTLLKGL 258 (398)
T ss_pred h-h-------CCCEEEeeccccccCCccceEEEEEeCcH-HHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 1 1 246899999999999999996 5666665 554 3443221 3334444444444444
No 181
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.70 E-value=1.3e-15 Score=173.72 Aligned_cols=191 Identities=13% Similarity=0.110 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcHHH
Q 043334 631 SLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNGNY 709 (903)
Q Consensus 631 ~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~~~ 709 (903)
+...+++.+.+... ...|..++++++++++++++|.+ ++++++|+++++.+++.++ ++|||+|+++.|+|+.+
T Consensus 11 ~~~~~~~~~~l~~~-~~~g~~~~~~~~e~~la~~~g~~-----~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~ 84 (375)
T PRK11706 11 GTELDYIQQAMSSG-KLCGDGGFTRRCQQWLEQRFGSA-----KVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVST 84 (375)
T ss_pred HHHHHHHHHHHHcC-CccCCCHHHHHHHHHHHHHhCCC-----eEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHH
Confidence 34466677766543 34566778999999999987762 7999999999998877655 78999999999999999
Q ss_pred HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCC
Q 043334 710 VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAF 789 (903)
Q Consensus 710 ~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY 789 (903)
...+...|++++.+++++ ++|.+|++++++++++++ ++|+++ ||||...+ +++|.++|+++|++||+|++|
T Consensus 85 ~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~t-k~i~~~----~~~G~~~~---~~~i~~la~~~~i~vIeD~a~ 155 (375)
T PRK11706 85 ANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKT-RAIVPV----HYAGVACE---MDTIMALAKKHNLFVVEDAAQ 155 (375)
T ss_pred HHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCC-eEEEEe----CCCCCccC---HHHHHHHHHHcCCEEEEECcc
Confidence 999999999999999985 468899999999998766 466654 57898866 788899999999999999999
Q ss_pred CCCc-cCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc--hhcccccceeeEEEeCcHHHHHHHHhC
Q 043334 790 SGLE-FNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS--LKMLTGALKFGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 790 ~~l~-f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S--K~~g~~GlRiG~lv~~~~~li~~l~~~ 855 (903)
+... +++.+. ..+ ..+.+.||. |.++ +|.+.++++.+++ +.++++.+
T Consensus 156 a~g~~~~~~~~---------g~~--------~~~~~~Sf~~~K~l~-~g~gG~~~~~~~~-~~~~~~~~ 205 (375)
T PRK11706 156 GVMSTYKGRAL---------GTI--------GHIGCFSFHETKNYT-AGEGGALLINDPA-LIERAEII 205 (375)
T ss_pred ccccccCCeee---------ecC--------cCEEEEeCCCCcccc-ccCCeEEEECCHH-HHHHHHHH
Confidence 7654 443321 111 122334433 9996 5888777776655 87766544
No 182
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.70 E-value=2.3e-15 Score=170.97 Aligned_cols=199 Identities=14% Similarity=0.133 Sum_probs=147.5
Q ss_pred CCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcH
Q 043334 628 PIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNG 707 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~ 707 (903)
++++.+.+++.... . .......+..+.+++.+++..|.+.+++ .|++++|+++++..++.++..+||.|+++.++|.
T Consensus 15 ~~~~~~~~a~~~~~-~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~-~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~ 91 (368)
T PRK13479 15 TTSRTVREAMLRDW-G-SWDDDFNALTASVRAKLVAIATGEEGYT-CVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAY 91 (368)
T ss_pred CCCHHHHHHhCCCC-C-CCChHHHHHHHHHHHHHHHHhCCCCCce-EEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCch
Confidence 35566666654432 1 1111244567888888888888754333 6889999999999999999999999999988877
Q ss_pred HH--HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCC-CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEE
Q 043334 708 NY--VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVK-KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVV 784 (903)
Q Consensus 708 ~~--~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~-~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI 784 (903)
+. ...++..|++++.++++. ++.+|++++++.+++++ .+++++++|+ ||||...+ +++|.++|+++|+++|
T Consensus 92 ~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~-~~tG~~~~---~~~i~~l~~~~~~~li 165 (368)
T PRK13479 92 GARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCE-TTTGILNP---LDEIAAVAKRHGKRLI 165 (368)
T ss_pred HHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEccc-CccccccC---HHHHHHHHHHcCCEEE
Confidence 65 477889999999999864 35689999999887543 2478999998 99999998 6788888999999999
Q ss_pred EecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceeeEEEeCcHHHHHHHHhC
Q 043334 785 IDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 785 ~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~~~~~li~~l~~~ 855 (903)
+|.++ .|+..+. + +. .. +..+++.|++|.+ |.+| +||++++++ +++.+...
T Consensus 166 vDa~~---~~g~~~~---~----~~---~~----~~d~~v~s~~K~l~g~~G--~G~l~~~~~-~~~~~~~~ 217 (368)
T PRK13479 166 VDAMS---SFGAIPI---D----IA---EL----GIDALISSANKCIEGVPG--FGFVIARRS-ELEACKGN 217 (368)
T ss_pred EEccc---ccCCccc---c----cc---cc----CceEEEecCccccccCCC--ceEEEECHH-HHHHhhcC
Confidence 99554 3333221 1 11 11 2347778999975 6778 699999987 77776653
No 183
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.69 E-value=1e-15 Score=174.66 Aligned_cols=169 Identities=12% Similarity=0.151 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHH----HHHHHHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGN----YVSAARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~----~~~~~~~~G~~vv~v~~~~ 727 (903)
+..+.+++.+++.+|.+ .+++++++++++..++.+++++||+|+++.+.|+. +...++..|++++.++++
T Consensus 54 p~~~~le~~la~l~g~~-----~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~- 127 (380)
T TIGR01325 54 PTVAAFEERIAALEGAE-----RAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPT- 127 (380)
T ss_pred chHHHHHHHHHHHhCCC-----cEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCC-
Confidence 34667777777777762 46778888899999999999999999999998865 344567789999998763
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
|++++++++++++ ++|++++|+ ||||.+.+ +++|.++|+++|+++|+|++|....+. .+
T Consensus 128 ------d~~~l~~~i~~~t-klV~le~p~-np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~-~p--------- 186 (380)
T TIGR01325 128 ------DLNAWEAAVKPNT-KLVFVETPS-NPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQ-QP--------- 186 (380)
T ss_pred ------CHHHHHHhcCCCc-eEEEEECCC-CCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC-Cc---------
Confidence 6889998887766 599999998 99999987 788899999999999999999643221 11
Q ss_pred hhhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhCC
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~~ 856 (903)
+. . +..+++.|+||.++.+|.++ |+++++++ +++.+....
T Consensus 187 l~----~----g~Divv~S~sK~l~g~g~~~gG~vv~~~~-~~~~l~~~~ 227 (380)
T TIGR01325 187 LK----L----GADVVVYSATKHIDGQGRVMGGVIAGSEE-LMAEVAVYL 227 (380)
T ss_pred hh----h----CCCEEEeeccceecCCCCeEEEEEEeCHH-HHHHHHHHH
Confidence 11 1 24688899999999889987 67777766 888777654
No 184
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.69 E-value=3e-15 Score=170.17 Aligned_cols=199 Identities=15% Similarity=0.140 Sum_probs=149.2
Q ss_pred CCcHHHHHHHHHHHHccCC--CCCc-------hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc---C
Q 043334 628 PIPSLVKAAIFESFARQNM--SESE-------IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL---E 695 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~~--~~G~-------~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~---p 695 (903)
++|+.+.+++.+.+..+.. ..|. .+..+.+++.+++.+|.+ +++ +|++|+|+++++..++.++.. +
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~-~v~~~~g~t~a~~~~~~~l~~~~~~ 87 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAP-SPD-EIIFTRNTTEAINLVAYGLGRANKP 87 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCC-CCC-eEEEeCCHHHHHHHHHHHhhhcCCC
Confidence 3567788888777654322 1221 233455667777778876 123 899999999999999999987 8
Q ss_pred CCeEEEcCCCcHHH----HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHH
Q 043334 696 GGTLCFPAGSNGNY----VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIEN 771 (903)
Q Consensus 696 GD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~e 771 (903)
||+|++++++|+.. ...++..|++++.++.+. ++.+|++++++.+.+++ ++|++++|+ ||||.+++ +++
T Consensus 88 g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~-~~v~~~~~~-~~tG~~~~---~~~ 160 (373)
T cd06453 88 GDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD--DGQLDLEALEKLLTERT-KLVAVTHVS-NVLGTINP---VKE 160 (373)
T ss_pred CCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC--CCCcCHHHHHHHhcCCc-eEEEEeCcc-cccCCcCC---HHH
Confidence 99999999999874 344567899999999863 56699999999998766 589999998 99999998 678
Q ss_pred HHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH
Q 043334 772 ILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 772 I~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~ 851 (903)
|.++|+++|++|++|++|+.... +. + + ... +..+++.|++|.++. .++||++++++ +++.
T Consensus 161 i~~~~~~~~~~li~D~a~~~~~~---~~---~----~---~~~----~~d~~~~s~~K~~~~--~g~g~~~~~~~-~~~~ 220 (373)
T cd06453 161 IGEIAHEAGVPVLVDGAQSAGHM---PV---D----V---QDL----GCDFLAFSGHKMLGP--TGIGVLYGKEE-LLEE 220 (373)
T ss_pred HHHHHHHcCCEEEEEhhhhcCce---ee---e----c---ccc----CCCEEEeccccccCC--CCcEEEEEchH-Hhhc
Confidence 89999999999999999853211 10 0 1 111 235677899999975 56899999877 8777
Q ss_pred HHhC
Q 043334 852 FSSF 855 (903)
Q Consensus 852 l~~~ 855 (903)
+...
T Consensus 221 ~~~~ 224 (373)
T cd06453 221 MPPY 224 (373)
T ss_pred CCCe
Confidence 6643
No 185
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.69 E-value=1.8e-15 Score=173.08 Aligned_cols=167 Identities=13% Similarity=0.106 Sum_probs=128.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH----HHHHHHcCCEEEEecCCCC
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY----VSAARFLKANIVNIPTESE 728 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~~~~ 728 (903)
..+.+++.+++..|.+. .++++++++++..++.+++.+||+|+++.|.|+.. ...+...|++++.++++
T Consensus 60 ~~~~le~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~-- 132 (391)
T TIGR01328 60 TVSNLEGRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA-- 132 (391)
T ss_pred hHHHHHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC--
Confidence 35677888888878642 34455556788888888999999999999988653 34456689999999863
Q ss_pred CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 729 VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
|++.+++++++++ ++|++++|+ ||||.+.+ +++|.++|+++|+++|+|++|+...+ +.+ +
T Consensus 133 -----d~e~l~~~i~~~t-klV~le~p~-Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~-~~~---------~ 192 (391)
T TIGR01328 133 -----IPEEVKAHIKDNT-KIVYFETPA-NPTMKLID---MERVCRDAHSQGVKVIVDNTFATPML-TNP---------V 192 (391)
T ss_pred -----CHHHHHHhhccCC-eEEEEECCC-CCCCcccC---HHHHHHHHHHcCCEEEEECCCchhcc-CCc---------h
Confidence 6889999988777 599999998 99999998 77888889999999999999963222 111 1
Q ss_pred hhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhC
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~ 855 (903)
. . +..++++|+||.+|++|.++ |+++++++ +++.++..
T Consensus 193 ~---~-----g~Divv~S~sK~lgg~g~~~gG~v~~~~~-li~~l~~~ 231 (391)
T TIGR01328 193 A---L-----GVDVVVHSATKYIGGHGDVVAGLICGKAE-LLQQIRMV 231 (391)
T ss_pred h---c-----CCCEEEccccccccCCCCceEEEEEcCHH-HHHHHHHH
Confidence 1 1 24588999999999999886 56666555 88887753
No 186
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.68 E-value=4.1e-16 Score=179.96 Aligned_cols=160 Identities=13% Similarity=0.091 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH----HHHHHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY----VSAARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~~~ 727 (903)
+..+.+++.+++.+|.+ ..++++++++++..++.+++++||+|+++.+.|+.. ...++..|++++.++.+
T Consensus 57 p~~~~le~~lA~l~g~~-----~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~- 130 (418)
T TIGR01326 57 PTTDVLEQRIAALEGGV-----AALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD- 130 (418)
T ss_pred hhHHHHHHHHHHHhCCC-----eEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC-
Confidence 34577888888888852 467777777888888888899999999999998654 34467789999999752
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
|++++++++++++ ++|++++|+ ||||.+.+ +++|.++|+++|+++|+|++|+...+ .. +
T Consensus 131 ------d~~~l~~~l~~~t-~~V~le~p~-NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~-~~--------~- 189 (418)
T TIGR01326 131 ------DPEEFEKAIDENT-KAVFAETIG-NPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL-CR--------P- 189 (418)
T ss_pred ------CHHHHHHhcCcCC-eEEEEECCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc-CC--------c-
Confidence 6899999998776 599999998 99999987 78889999999999999999952110 00 0
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
+. .+.+++++|+||.++.+|+|+||++++..
T Consensus 190 ---l~-----~g~Divv~S~sK~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 190 ---ID-----HGADIVVHSATKYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred ---hh-----cCCeEEEECccccccCCccceEEEEEecc
Confidence 11 13689999999999999999999999654
No 187
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.68 E-value=2.2e-15 Score=174.05 Aligned_cols=212 Identities=11% Similarity=0.027 Sum_probs=148.5
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHH-ccCCC-------CCchHHHHH----HHHHHHhhcCCCCCCCCcEEecCchH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFA-RQNMS-------ESEIDVTPS----IQQYIKSNFGFPIDINAEFIYADCSQ 682 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~-~y~~~-------~G~~~lr~a----la~~l~~~~G~~~~pe~~I~vt~Gs~ 682 (903)
.+.++|..+++. +|+.+++++...+. .|... .|. +..+. .++.+++.+|.+.. +|++++|+
T Consensus 25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~la~~~g~~~~---~i~~~sgt- 97 (416)
T PRK00011 25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGC-EYVDVVEQLAIDRAKELFGAEYA---NVQPHSGS- 97 (416)
T ss_pred hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCce---eeecCCch-
Confidence 467999998887 67889988877653 33211 121 12222 34478888898654 67777775
Q ss_pred HHHHHHHHHhccCCCeEEEcCCCcHHHHHH-----HHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCC
Q 043334 683 SLFNKLVLCCILEGGTLCFPAGSNGNYVSA-----ARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTI 757 (903)
Q Consensus 683 ~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~-----~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~ 757 (903)
+++..++.++++|||+|+++.|+|+.+... ....|++++.++++. +++.+|++++++.+++...+++++++++
T Consensus 98 ~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~~~- 175 (416)
T PRK00011 98 QANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGASA- 175 (416)
T ss_pred HHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECCCc-
Confidence 578888999999999999999999765321 234467888888864 3477999999999975333577777665
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCcEEEEecCCC-CCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 758 NPTGLLYSNKEIENILTVCAKYGARVVIDTAFS-GLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 758 NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~-~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
|| ...+ +++|.++|+++|+++|+|++|. ++.+.+... .. +. ...++++|+||.+ +|+
T Consensus 176 ~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~------~~---~~------~~di~~~S~~K~l--~g~ 233 (416)
T PRK00011 176 YS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHP------SP---VP------HADVVTTTTHKTL--RGP 233 (416)
T ss_pred CC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCccC------CC---CC------CCcEEEecCCcCC--CCC
Confidence 65 3344 8899999999999999999974 233322110 00 11 1357899999976 689
Q ss_pred eeeEEEeCcHHHHHHHHhCCC
Q 043334 837 KFGFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~~~~ 857 (903)
|.||++++++++++.+.+...
T Consensus 234 ~gg~i~~~~~~~~~~l~~~~~ 254 (416)
T PRK00011 234 RGGLILTNDEELAKKINSAVF 254 (416)
T ss_pred CceEEEeCCHHHHHHHHHHhC
Confidence 999999976448888876543
No 188
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.68 E-value=2.4e-15 Score=171.09 Aligned_cols=189 Identities=14% Similarity=0.127 Sum_probs=144.8
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPT 725 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~ 725 (903)
..+..+.+++.+++.+|.+ ..++++++++++..++.+++++||+|+++.++|...... ++..|+++..++.
T Consensus 38 ~~p~~~~le~~la~l~g~~-----~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 112 (369)
T cd00614 38 GNPTVDALEKKLAALEGGE-----AALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP 112 (369)
T ss_pred CChhHHHHHHHHHHHHCCC-----CEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCC
Confidence 4556778888888888753 345556667999999999999999999999999876543 4578999988876
Q ss_pred CCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchh
Q 043334 726 ESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLE 805 (903)
Q Consensus 726 ~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~ 805 (903)
+ |++++++++++++ ++|++.+|+ ||||.+.+ +++|.++|+++|+++|+|++|+...+. .+
T Consensus 113 ~-------d~~~l~~~i~~~~-~~v~~e~~~-np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~-~~------- 172 (369)
T cd00614 113 D-------DPEALEAAIKPET-KLVYVESPT-NPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ-RP------- 172 (369)
T ss_pred C-------CHHHHHHhcCCCC-eEEEEECCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC-Ch-------
Confidence 3 4889999988766 599999998 99999998 788999999999999999999643321 11
Q ss_pred hhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 806 GCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 806 ~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
+. . +..++++|+||.++.+| .+.||++++++++++.+..... ...++...++++...|
T Consensus 173 --~~----~----g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l 233 (369)
T cd00614 173 --LE----L----GADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGL 233 (369)
T ss_pred --hh----h----CCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCC
Confidence 11 1 25689999999998766 8899999988448888876543 3445566665555555
No 189
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.68 E-value=8.6e-15 Score=167.09 Aligned_cols=191 Identities=15% Similarity=0.139 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcHHH
Q 043334 631 SLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNGNY 709 (903)
Q Consensus 631 ~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~~~ 709 (903)
+...+++.+.+.+.....| +....+++.+++++|.+ +++.++|+++++.+++.++ +++||+|++++|+|+.+
T Consensus 14 ~~e~~~~~~~l~~~~~~~g--~~~~~le~~la~~~g~~-----~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~ 86 (379)
T PRK11658 14 DEELAAVKEVLRSGWITTG--PKNQALEQAFCQLTGNQ-----HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVST 86 (379)
T ss_pred HHHHHHHHHHHHcCCccCC--HhHHHHHHHHHHHhCCC-----eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHH
Confidence 4557777777765433333 23556666666666763 4677888899999999998 89999999999999999
Q ss_pred HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCC
Q 043334 710 VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAF 789 (903)
Q Consensus 710 ~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY 789 (903)
...+...|++++.++++. ++|.+|++.++++++++++ +|+ |+ ||+|...+ +++|.++|+++|++||+|++|
T Consensus 87 ~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tk-av~---~~-~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~ 157 (379)
T PRK11658 87 LNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTK-AII---PV-HYAGAPAD---LDAIRAIGERYGIPVIEDAAH 157 (379)
T ss_pred HHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCe-EEE---Ee-CCCCCcCC---HHHHHHHHHHcCCeEEEECCC
Confidence 999999999999999975 4688999999999987764 554 66 88999876 778899999999999999999
Q ss_pred C-CCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhC
Q 043334 790 S-GLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 790 ~-~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~ 855 (903)
+ +..+.+... .. ..+.+.||++...++|.+.|+++.+++++.++++.+
T Consensus 158 a~g~~~~~~~~------------g~------~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~ 206 (379)
T PRK11658 158 AVGTYYKGRHI------------GA------RGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSL 206 (379)
T ss_pred ccCCeECCeec------------CC------CCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHH
Confidence 7 344544321 11 112567887766778889999999876688777653
No 190
>PRK14968 putative methyltransferase; Provisional
Probab=99.68 E-value=2.4e-15 Score=154.08 Aligned_cols=171 Identities=25% Similarity=0.344 Sum_probs=130.8
Q ss_pred cCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCC
Q 043334 4 IPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKG 83 (903)
Q Consensus 4 ~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~ 83 (903)
.|++|+|+..+..+.+.+.. .++++|||+|||+|.++..+++. +.+|+|+|+|+++++.+++|+..+++.
T Consensus 2 ~~~~~~p~~~~~~l~~~~~~-----~~~~~vLd~G~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~--- 71 (188)
T PRK14968 2 NDEVYEPAEDSFLLAENAVD-----KKGDRVLEVGTGSGIVAIVAAKN--GKKVVGVDINPYAVECAKCNAKLNNIR--- 71 (188)
T ss_pred CCcccCcchhHHHHHHhhhc-----cCCCEEEEEccccCHHHHHHHhh--cceEEEEECCHHHHHHHHHHHHHcCCC---
Confidence 58999998777766666653 35689999999999999999987 689999999999999999999887752
Q ss_pred CCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccccccc
Q 043334 84 QPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQ 163 (903)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~ 163 (903)
..++.++++|+.+..... +||+|++||||....+......... ..+..+.
T Consensus 72 -----------~~~~~~~~~d~~~~~~~~--~~d~vi~n~p~~~~~~~~~~~~~~~-----------------~~~~~~~ 121 (188)
T PRK14968 72 -----------NNGVEVIRSDLFEPFRGD--KFDVILFNPPYLPTEEEEEWDDWLN-----------------YALSGGK 121 (188)
T ss_pred -----------CcceEEEecccccccccc--CceEEEECCCcCCCCchhhhhhhhh-----------------hhhccCc
Confidence 012889999988765433 7999999999986543221110000 0111234
Q ss_pred ccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 164 FGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 164 ~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
++...+..+++++.++|||||.+++..+.......+.+++.+.||++....
T Consensus 122 ~~~~~~~~~i~~~~~~Lk~gG~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 172 (188)
T PRK14968 122 DGREVIDRFLDEVGRYLKPGGRILLLQSSLTGEDEVLEYLEKLGFEAEVVA 172 (188)
T ss_pred ChHHHHHHHHHHHHHhcCCCeEEEEEEcccCCHHHHHHHHHHCCCeeeeee
Confidence 456677899999999999999999988877667777889999999887663
No 191
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=2.9e-15 Score=170.95 Aligned_cols=170 Identities=13% Similarity=0.165 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH---HHcCCEEEEecCCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA---RFLKANIVNIPTESE 728 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~---~~~G~~vv~v~~~~~ 728 (903)
+..+++++.+++.+|.+ ++++++|+++++..++.+++++||+|+++.|+|+.+...+ ...|++++.+.
T Consensus 53 p~~~~lE~~lA~l~g~~-----~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~---- 123 (385)
T PRK08574 53 PTLRPLEEALAKLEGGV-----DALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY---- 123 (385)
T ss_pred ccHHHHHHHHHHHhCCC-----cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC----
Confidence 34566777777777742 4677788889999889999999999999999999987766 44577776653
Q ss_pred CCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 729 VGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
+|++.+++++++ ++ ++|++++|+ ||||.+++ +++|+++|+++|++||+|++|+.-. ...+
T Consensus 124 ----~d~~~l~~~i~~~~t-klV~ie~p~-NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~-~~~~--------- 184 (385)
T PRK08574 124 ----PSTEDIIEAIKEGRT-KLVFIETMT-NPTLKVID---VPEVAKAAKELGAILVVDNTFATPL-LYRP--------- 184 (385)
T ss_pred ----CCHHHHHHhcCccCc-eEEEEECCC-CCCCEecC---HHHHHHHHHHcCCEEEEECCCCccc-cCCh---------
Confidence 467889999887 66 599999998 99999999 7788999999999999999994211 1111
Q ss_pred hhhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhCCC
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~~~ 857 (903)
+. . +..++++|+||.++.+|-++ |++++.++++.+.+.....
T Consensus 185 l~----~----GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~ 227 (385)
T PRK08574 185 LR----H----GADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRR 227 (385)
T ss_pred hh----h----CCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHH
Confidence 11 1 35789999999998777765 7677765558777765443
No 192
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=5.9e-15 Score=168.14 Aligned_cols=187 Identities=13% Similarity=0.098 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~~ 727 (903)
+-++.+++.+++..|. + ++++++|+++++..++.+++++||+|+++.|+|+..... ....|.+++.++.
T Consensus 53 pt~~~Le~~lA~leg~----e-~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-- 125 (388)
T PRK08861 53 PNRGLLEQTLSELESG----K-GAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-- 125 (388)
T ss_pred chHHHHHHHHHHHhCC----C-eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC--
Confidence 3467788888887773 2 799999999999999999999999999999999964432 2345788888753
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
.|++.+++++++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+|++|....+. .+
T Consensus 126 -----~d~e~l~~~i~~~t-klV~lesP~-NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~-~p--------- 185 (388)
T PRK08861 126 -----SDAAALDAALAKKP-KLILLETPS-NPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ-KP--------- 185 (388)
T ss_pred -----CCHHHHHHhcCcCC-eEEEEECCC-CCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC-CC---------
Confidence 47899999988777 599999998 99999999 667888899999999999999643322 11
Q ss_pred hhhhccCCCCCCceEEEccCchhcccc-cceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTG-ALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
+. + +-.++++|++|.++.+ +.+.|+++++++++.+.+..... ...+++..-+.+..-|
T Consensus 186 l~-~-------GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl 246 (388)
T PRK08861 186 LE-L-------GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGI 246 (388)
T ss_pred cc-c-------CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcC
Confidence 11 1 2458999999999754 47889999876657777765443 2333444444333333
No 193
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.67 E-value=3.5e-15 Score=164.47 Aligned_cols=165 Identities=15% Similarity=0.172 Sum_probs=128.4
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCc--
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGF-- 731 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f-- 731 (903)
.+.+++.+++.+|.+. -+++++|+++++..++.++++|||.|+++.|+|.+....+...|++++.++.+.+.+|
T Consensus 61 i~~~~~~~A~~~ga~~----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~ 136 (294)
T cd00615 61 IKEAQELAARAFGAKH----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGI 136 (294)
T ss_pred HHHHHHHHHHHhCCCC----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCc
Confidence 3455566666677542 4667999999999999999999999999999999999999999999999987654433
Q ss_pred --ccCHHHHHHHhhcC-CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCC-CccCCCCCCCCchhhh
Q 043334 732 --KMTEKTLVTILETV-KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSG-LEFNYEGWGGWDLEGC 807 (903)
Q Consensus 732 --~ld~~~L~~~l~~~-~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~-l~f~~~~~s~~s~~~~ 807 (903)
.+|++.+++++++. ..+++++++| ||||.+++ +++|+++|+++|++||+||+|+. +.|.+... ..
T Consensus 137 ~~~i~~~~l~~~l~~~~~~k~v~l~~p--~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~------~~ 205 (294)
T cd00615 137 AGGIPPETFKKALIEHPDAKAAVITNP--TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILP------SS 205 (294)
T ss_pred CCCCCHHHHHHHHHhCCCceEEEEECC--CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccC------cc
Confidence 68999999998742 3358899988 58999998 88999999999999999999963 34443221 00
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
.. . .+..+++.|++|++ +|+|.|+++
T Consensus 206 ~~---~----~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 206 AA---M----AGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred hh---h----cCCcEEEEchhccc--chHhHHHHH
Confidence 11 1 14789999999975 688876544
No 194
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.67 E-value=2.2e-14 Score=165.21 Aligned_cols=232 Identities=13% Similarity=0.041 Sum_probs=166.4
Q ss_pred CCCeEEccCCC-CCCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 614 NSGLIHMDVDQ-SFLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 614 ~~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
+.++++|+.++ -.+...+.+++++.+.+.+++. ..|..+....+++.+++.+|.+ . .+++++|+. +.
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~-~---~~~~~SG~~-An 118 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKE-A---ALLFTSGYV-SN 118 (406)
T ss_pred CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCC-c---EEEeCCcHH-HH
Confidence 35678876553 3355688999999999887653 1344556788899999888853 1 588888875 55
Q ss_pred HHHHHHhcc--CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc---CCCcEEEEECCCCCCc
Q 043334 686 NKLVLCCIL--EGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET---VKKPWVYISGPTINPT 760 (903)
Q Consensus 686 ~~ll~~l~~--pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~---~~~~~vil~~P~~NPT 760 (903)
..++..+.. +||.|++....|+.....++..|++++.++. .|++.+++.+.. ...++|++++++ ||+
T Consensus 119 ~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~v~-~~~ 190 (406)
T PRK13393 119 WAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFESVY-SMD 190 (406)
T ss_pred HHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcCCC-CCC
Confidence 556665655 7888888888888888888888988877764 256677766642 223578899997 999
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
|.+.+ +++|.++|+++|+++|+||+|+...|+..... ..... +.. ...+|+++||||.||++| ||
T Consensus 191 G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g------~~~~~-~~~--~~~~i~~~tlsKa~g~~G---G~ 255 (406)
T PRK13393 191 GDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGG------IAERE-GLA--DRLTIIEGTLAKAFGVMG---GY 255 (406)
T ss_pred CchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCc------hhhhc-CCC--CCCeEEEEeCchhhcccC---ce
Confidence 99999 88888999999999999999974444433211 11111 111 124688899999999988 99
Q ss_pred EEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 841 LVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 841 lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
++++++ +++.+..... ..+.+...+.++.++|+
T Consensus 256 ~~~~~~-~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~ 292 (406)
T PRK13393 256 ITGSAA-LCDFIRSFASGFIFTTSLPPAVAAGALASVR 292 (406)
T ss_pred eeCCHH-HHHHHHHhCcCceecCccCHHHHHHHHHHHH
Confidence 998877 8888876543 23455666778888884
No 195
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.67 E-value=6.9e-15 Score=169.27 Aligned_cols=232 Identities=8% Similarity=0.039 Sum_probs=154.9
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCC--CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNM--SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~--~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+||..| ...++ .++.+.+++.+.+.++.. .....+....+++.+.+..+. + .++++++++++..
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~---~~~~~~sGseA~e 111 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATFA--E---RVFFANSGAEANE 111 (403)
T ss_pred CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCCC--C---EEEEeCchHHHHH
Confidence 467789999765 33344 678889999888865321 112233456778888775432 2 6777777777777
Q ss_pred HHHHHhcc-------C-CCeEEEcCCCcHH-HHHHHHHcCC------------EEEEecCCCCCCcccCHHHHHHHhhcC
Q 043334 687 KLVLCCIL-------E-GGTLCFPAGSNGN-YVSAARFLKA------------NIVNIPTESEVGFKMTEKTLVTILETV 745 (903)
Q Consensus 687 ~ll~~l~~-------p-GD~Vlv~~P~y~~-~~~~~~~~G~------------~vv~v~~~~~~~f~ld~~~L~~~l~~~ 745 (903)
.++..... + .+.|+..+-+|-+ +.......|. +++.++. .|++.+++.+.++
T Consensus 112 ~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 184 (403)
T PRK05093 112 AAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH 184 (403)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC
Confidence 76664311 1 2456666655544 3323222111 1122211 2789999988755
Q ss_pred CCcEEEEECCCCCCcccCC--CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 746 KKPWVYISGPTINPTGLLY--SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG~v~--s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
+ ++|+++ |. ||+|.++ +.+.+++|.++|++||+++|+||+|.++.+.+... + .....-.+ +
T Consensus 185 ~-aaiiie-p~-~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~---~----~~~~~~~p---d---- 247 (403)
T PRK05093 185 T-CAVVVE-PI-QGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF---A----YMHYGVTP---D---- 247 (403)
T ss_pred e-EEEEEe-cc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch---h----hhhcCCCC---C----
Confidence 4 355554 87 8998876 89999999999999999999999999877766531 1 11111111 1
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCC-C-CCCCcHHHHHHHHHHHh
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP-G-LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~-~-~~~~s~~~Q~aa~~~L~ 874 (903)
+.||||+++ +|+|+||++++++ +++.+.... . +.+.+++.|.++.++|+
T Consensus 248 i~s~sK~l~-~G~rig~vv~~~~-i~~~l~~~~~~~t~~~~~~~~~aa~a~L~ 298 (403)
T PRK05093 248 ILTSAKALG-GGFPIGAMLTTAE-IASHFKVGTHGSTYGGNPLACAVAEAVFD 298 (403)
T ss_pred EEEeccccc-CCcceEEEEEcHH-HHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 569999998 9999999999987 888887532 2 66788999999999884
No 196
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.66 E-value=5.6e-15 Score=160.64 Aligned_cols=241 Identities=12% Similarity=0.120 Sum_probs=153.5
Q ss_pred cc-CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH-HHHHHHHHH-h----cc---C-----CCeEEEcCCCcH
Q 043334 643 RQ-NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ-SLFNKLVLC-C----IL---E-----GGTLCFPAGSNG 707 (903)
Q Consensus 643 ~y-~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~-~al~~ll~~-l----~~---p-----GD~Vlv~~P~y~ 707 (903)
+| +...|+++.|+-+++ ..|++.+ +|++...++ ..+.-++.. + .+ | .-+.|+|.|+|.
T Consensus 63 NY~G~l~Gipe~r~l~a~----llgv~~~---~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYD 135 (425)
T PF12897_consen 63 NYPGGLDGIPEARELFAE----LLGVPPE---NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYD 135 (425)
T ss_dssp SS-S-SS--HHHHHHHHH----HHTS-GG---GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--H
T ss_pred CCCCccCChHHHHHHHHH----HhCCCHH---HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCch
Confidence 46 556677776665555 4588766 777775554 444433322 2 11 1 126899999999
Q ss_pred HHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCC-CCCcccCCCHHHHHHHHHH-HHhCCcEEEE
Q 043334 708 NYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPT-INPTGLLYSNKEIENILTV-CAKYGARVVI 785 (903)
Q Consensus 708 ~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~-~NPTG~v~s~eel~eI~~i-a~k~~i~VI~ 785 (903)
-+..+++.+|.+.++||+.++ | +|.+.+++++.+.....-+.|.|. +||||.+||.|..++++++ +...+..|+-
T Consensus 136 RHFai~E~~Giemi~VpM~~d-G--PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~W 212 (425)
T PF12897_consen 136 RHFAITEHFGIEMIPVPMTED-G--PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFW 212 (425)
T ss_dssp HHHHHHHHCT-EEEEEEEETT-E--E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEE
T ss_pred HHHHHHHhhCcEEEecCCCCC-C--CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEe
Confidence 999999999999999999874 3 999999999865443457788899 9999999999999999998 4567999999
Q ss_pred ecCCCCCcc-CCCCC-CCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCC
Q 043334 786 DTAFSGLEF-NYEGW-GGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKP 861 (903)
Q Consensus 786 DeaY~~l~f-~~~~~-s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~ 861 (903)
|++|.-..+ +.... ...+ .+.......+ .++++.+.|.||.. .||-.++|+.++.. .++.+.+..+ ..++
T Consensus 213 DNAY~vHhL~~~~~~~~~~n---il~~~~~AGn-pdrv~~F~STSKIT-f~GaGva~~aaS~~-Nl~~~~~~~~~~tIgp 286 (425)
T PF12897_consen 213 DNAYAVHHLYDEEPRDALLN---ILDACAKAGN-PDRVYVFASTSKIT-FPGAGVAFFAASEA-NLAWIKKHLSVQTIGP 286 (425)
T ss_dssp E-TTTT-BSSSSSS---------HHHHHHHTT--TTSEEEEEESTTTS--TTSS-EEEEE-HH-HHHHHHHHHHHH-S--
T ss_pred ecCceEeeccccccchhhhH---HHHHHHHcCC-CCeEEEEecccccc-cCCcceeeeecCHH-HHHHHHHHhcCceeCc
Confidence 999986555 22221 1112 2332223322 26999999999976 79999999999988 6666666543 8889
Q ss_pred cHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 862 HSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 862 s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.-+.|..-..+|...+ .++..|+++.++.++-|.+.+.
T Consensus 287 dKvNQLRHvrff~d~~---gGv~aHM~kHa~il~PKF~~V~ 324 (425)
T PF12897_consen 287 DKVNQLRHVRFFKDAE---GGVRAHMRKHAAILRPKFEAVL 324 (425)
T ss_dssp -HHHHHHHHHHHHSHH---THHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhcChh---hHHHHHHHHHHHHHhhhHHHHH
Confidence 9999999999995322 2688999999999999988764
No 197
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.66 E-value=1.5e-14 Score=164.40 Aligned_cols=201 Identities=14% Similarity=0.127 Sum_probs=151.7
Q ss_pred EccCCCCCCCCcHHHHHHHHHHHHccC--CCCC-c------hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 619 HMDVDQSFLPIPSLVKAAIFESFARQN--MSES-E------IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 619 dLs~g~p~~~~p~~v~~al~~al~~y~--~~~G-~------~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.|+.+...+++|+.+.+++.+.+..+. +..+ + ....+.+++.+++++|.+.. + +|++|+|+++++..++
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~-~v~~~~g~t~al~~~~ 79 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSS-A-HVVFTNNATTALNIAL 79 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCC-C-eEEEeCCHHHHHHHHH
Confidence 466777777888999999988877653 1111 1 24456677778888887532 2 7999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHH----HHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCC
Q 043334 690 LCCILEGGTLCFPAGSNGNYVS----AARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYS 765 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~----~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s 765 (903)
.+++++||+|+++.++|+.+.. .++..|++++.++.+. ++.+|++.+++++++++ +++++++|+ ||||.+++
T Consensus 80 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~-~~v~~~~~~-n~tG~~~~ 155 (376)
T TIGR01977 80 KGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNT-KLIVVSHAS-NVTGTILP 155 (376)
T ss_pred HhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCC-eEEEEECCC-CCccccCC
Confidence 9999999999999999987643 4566799999999864 45689999999998766 589999998 99999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCc
Q 043334 766 NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNH 845 (903)
Q Consensus 766 ~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~ 845 (903)
+++|.++|+++|+++|+|++++.... +. . +... +..+++.|..|.++.|. -+|.++..+
T Consensus 156 ---~~~i~~l~~~~~~~livD~a~~~g~~---~~---~-------~~~~----~~D~~~~s~~K~l~~p~-g~g~l~~~~ 214 (376)
T TIGR01977 156 ---IEEIGELAQENGIFFILDAAQTAGVI---PI---D-------MTEL----AIDMLAFTGHKGLLGPQ-GTGGLYIRE 214 (376)
T ss_pred ---HHHHHHHHHHcCCEEEEEhhhccCcc---CC---C-------chhc----CCCEEEecccccccCCC-CceEEEEcC
Confidence 66788999999999999999953211 10 0 0111 35688999999876442 257776655
Q ss_pred H
Q 043334 846 P 846 (903)
Q Consensus 846 ~ 846 (903)
.
T Consensus 215 ~ 215 (376)
T TIGR01977 215 G 215 (376)
T ss_pred C
Confidence 4
No 198
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=8e-15 Score=167.86 Aligned_cols=186 Identities=9% Similarity=0.028 Sum_probs=141.5
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH----HHHHcCCEEEEec
Q 043334 649 SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS----AARFLKANIVNIP 724 (903)
Q Consensus 649 G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~----~~~~~G~~vv~v~ 724 (903)
|.|. .+++++.+++..|.+ ++++++|+++++..++.++++|||+|++++|+|+.+.. .++..|++++.++
T Consensus 63 ~~pt-~~~Le~~lA~l~g~~-----~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd 136 (394)
T PRK07050 63 ATPT-SLALAQRLAEIEGGR-----HALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYD 136 (394)
T ss_pred CCHH-HHHHHHHHHHHhCCC-----eEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEEC
Confidence 4444 577888888887742 69999999999999999999999999999999998664 4577899999887
Q ss_pred CCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCch
Q 043334 725 TESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDL 804 (903)
Q Consensus 725 ~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~ 804 (903)
.. +.+.+++++++++ ++|++++|+ ||||. ..++++|.++|+++|++||+|++|....+. .
T Consensus 137 ~~-------~~~~l~~~i~~~t-klV~le~p~-Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~~~~-~------- 196 (394)
T PRK07050 137 PL-------IGAGIADLIQPNT-RLIWLEAPG-SVTME---VPDVPAITAAARARGVVTAIDNTYSAGLAF-K------- 196 (394)
T ss_pred CC-------CHHHHHHhcCCCC-eEEEEECCC-CCCcc---HhhHHHHHHHHHHcCCEEEEECCccccccc-C-------
Confidence 42 3467888888877 599999998 99974 567999999999999999999999542211 0
Q ss_pred hhhhhhhccCCCCCCceEEEccCchhcc-cccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHH
Q 043334 805 EGCLSKLYSSTNSSFNVSLLGGLSLKML-TGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIK 870 (903)
Q Consensus 805 ~~~~~~l~~~~~~~~~vI~l~S~SK~~g-~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~ 870 (903)
+ +. . +..+++.|+||.++ ..|.+.|++++.+++++++++.... ..+.+....+.+.
T Consensus 197 -~-l~---~-----GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~l 255 (394)
T PRK07050 197 -P-FE---H-----GVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVL 255 (394)
T ss_pred -H-HH---c-----CCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 1 11 1 24789999999996 3445789999876668888775543 3344444444443
No 199
>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=3.8e-15 Score=145.95 Aligned_cols=176 Identities=18% Similarity=0.309 Sum_probs=142.6
Q ss_pred CcccCcchhHHHHHHhhcCCCCCCC--CCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccC
Q 043334 6 SIFIPEDWSFTFYEGLNRHPDSILK--DKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEK 82 (903)
Q Consensus 6 ~vfiP~~w~~~~~~~L~~~~~~~~~--~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~ 82 (903)
.||.|.+.++.+++.|.+-...... ...++|||||+|..+-.+++.. |+....++|+||.+++..++.++.|+.
T Consensus 17 dVYEPaEDTFlLlDaLekd~~eL~~~~~~i~lEIG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl~TA~~n~~--- 93 (209)
T KOG3191|consen 17 DVYEPAEDTFLLLDALEKDAAELKGHNPEICLEIGCGSGVVSTFLASVIGPQALYLATDINPEALEATLETARCNRV--- 93 (209)
T ss_pred hccCccchhhHHHHHHHHHHHHHhhcCceeEEEecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhcCC---
Confidence 5899999999999988764433222 5689999999999999998875 456899999999999999999998875
Q ss_pred CCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccc
Q 043334 83 GQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVED 162 (903)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~ 162 (903)
+++.++.|+.+-... ++.|+++.||||...++...-...+. ..|.++
T Consensus 94 --------------~~~~V~tdl~~~l~~--~~VDvLvfNPPYVpt~~~~i~~~~i~-----------------~a~aGG 140 (209)
T KOG3191|consen 94 --------------HIDVVRTDLLSGLRN--ESVDVLVFNPPYVPTSDEEIGDEGIA-----------------SAWAGG 140 (209)
T ss_pred --------------ccceeehhHHhhhcc--CCccEEEECCCcCcCCcccchhHHHH-----------------HHHhcC
Confidence 689999999988766 38999999999998776443211111 123348
Q ss_pred cccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 163 QFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 163 ~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
.+|.+..++++.++-..|.|.|.+++..-.......+-++++..||.....++.+
T Consensus 141 ~~Gr~v~d~ll~~v~~iLSp~Gv~Ylv~~~~N~p~ei~k~l~~~g~~~~~~~~Rk 195 (209)
T KOG3191|consen 141 KDGREVTDRLLPQVPDILSPRGVFYLVALRANKPKEILKILEKKGYGVRIAMQRK 195 (209)
T ss_pred cchHHHHHHHHhhhhhhcCcCceEEeeehhhcCHHHHHHHHhhcccceeEEEEEe
Confidence 8999999999999999999999999987777777766679999999988776555
No 200
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.64 E-value=3.1e-14 Score=161.40 Aligned_cols=221 Identities=15% Similarity=0.091 Sum_probs=156.0
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH--HHHHHHcCCEEEEecCCC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY--VSAARFLKANIVNIPTES 727 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~--~~~~~~~G~~vv~v~~~~ 727 (903)
..+..+.+++.+++.+|.+.+++ +|++|+|+++++..++.+++.+||.+++..+++.+. ...++..|++++.++++.
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~-~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~ 111 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYT-SVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE 111 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCce-EEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC
Confidence 34455677888888889864433 799999999999999999999999877766665544 466788999999999864
Q ss_pred CCCcccCHHHHHHHhhcCC-CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 728 EVGFKMTEKTLVTILETVK-KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~-~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
+..+|++.+++++++++ .+++.+++++ ||||..++ +++|.++|+++|+++|+|.+++ ++..+. +
T Consensus 112 --~~~~d~~~l~~~l~~~~~~~~v~~~~~~-~~tG~~~~---i~~I~~l~~~~g~~livD~~~~---~g~~~~---~--- 176 (363)
T TIGR02326 112 --VEPPDVVEVEAILAADPAITHIALVHCE-TTTGILNP---IEAVAKLAHRHGKVTIVDAMSS---FGGIPI---D--- 176 (363)
T ss_pred --CCCCCHHHHHHHHhhCCCccEEEEEeec-CCccccCc---HHHHHHHHHHcCCEEEEEcccc---ccCccc---c---
Confidence 44589999999987543 2467888887 99999998 7899999999999999998764 333321 1
Q ss_pred hhhhhccCCCCCCceEEEccCchhc-ccccceeeEEEeCcHHHHHHHHhC------------------C--CCCCCcHHH
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGFLVLNHPQLVDAFSSF------------------P--GLSKPHSTV 865 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~~~~~li~~l~~~------------------~--~~~~~s~~~ 865 (903)
+. .. +..+++.|++|.+ |.+| +||++++++ .++.+... . ....++.+.
T Consensus 177 -~~---~~----~~D~~~~s~~K~l~~p~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~ 245 (363)
T TIGR02326 177 -IA---EL----HIDYLISSANKCIQGVPG--FGFVIARQA-ELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHV 245 (363)
T ss_pred -hh---hc----CccEEEecCccccccCCc--ceEEEECHH-HHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHH
Confidence 11 11 2458889999987 4556 799999887 66654321 0 122456777
Q ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 866 RYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 866 Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+..+++..-.. ...+++.++.++++++++.
T Consensus 246 ~~al~~al~~l~~-----~g~~~~~~~~~~~~~~~l~ 277 (363)
T TIGR02326 246 VHAFAQALLELEK-----EGGVAARHQRYQQNQKTLV 277 (363)
T ss_pred HHHHHHHHHHHHH-----hhCHHHHHHHHHHHHHHHH
Confidence 7776666631000 0124445566666666553
No 201
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.64 E-value=3.4e-14 Score=162.82 Aligned_cols=223 Identities=14% Similarity=0.134 Sum_probs=156.0
Q ss_pred CCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeE
Q 043334 627 LPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTL 699 (903)
Q Consensus 627 ~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~V 699 (903)
+...+.++++..+++++|+. .+|.......+++.+++.+|.+ + .+++++|.++.+. ++.+++++||.|
T Consensus 11 l~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-~---al~~~sG~~a~~~-~i~~l~~~GD~V 85 (392)
T PLN03227 11 TSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE-S---AILYSDGASTTSS-TVAAFAKRGDLL 85 (392)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC-c---EEEecCcHHHHHH-HHHHhCCCCCEE
Confidence 44678899999999887643 2455556788888888888875 2 6999999988884 567789999999
Q ss_pred EEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc----------CCCcEEEEECCCCCCcccCCCHHHH
Q 043334 700 CFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET----------VKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 700 lv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~----------~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
+++++.|+.+...+...+++++.++..+. -+++.+.+.+.+ ...++|++.+|. ||+|.+.+ +
T Consensus 86 l~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~-~~~G~i~~---l 157 (392)
T PLN03227 86 VVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLY-KNTGTLAP---L 157 (392)
T ss_pred EEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEcCCc-CCCCcccC---H
Confidence 99999999999888888888888876421 123443333321 123578888887 99999999 7
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
++|.++|+++|+++|+||+|. +-+.+.... .....+.-.+ ..+..|++.|+||.+| ++.||++++.+ ++
T Consensus 158 ~~i~~l~~~~g~~livDe~~~-~g~~g~~G~-----g~~~~~g~~p-~~~~Div~~slsk~~g---~~gg~v~~~~~-~~ 226 (392)
T PLN03227 158 KELVALKEEFHYRLILDESFS-FGTLGKSGR-----GSLEHAGLKP-MVHAEIVTFSLENAFG---SVGGMTVGSEE-VV 226 (392)
T ss_pred HHHHHHHHHcCCEEEEECccc-ccccCCCCC-----cHHHHcCCCC-CCCceEEEeechhhhh---ccCcEEecCHH-HH
Confidence 789999999999999999996 333232110 0111111111 0245899999999875 55599998877 88
Q ss_pred HHHHhCCC--CCCC--cHHHHHHHHHHH
Q 043334 850 DAFSSFPG--LSKP--HSTVRYAIKKLL 873 (903)
Q Consensus 850 ~~l~~~~~--~~~~--s~~~Q~aa~~~L 873 (903)
+.+..... ..+. ++..+.++..++
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~aa~~al 254 (392)
T PLN03227 227 DHQRLSGSGYCFSASAPPFLAKADATAT 254 (392)
T ss_pred HHHHHhCcCccccCCCCHHHHHHHHHHH
Confidence 77764332 2232 355666666555
No 202
>PRK05939 hypothetical protein; Provisional
Probab=99.64 E-value=5.3e-15 Score=169.37 Aligned_cols=160 Identities=16% Similarity=0.153 Sum_probs=128.2
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH---HHHHcCCEEEEecC
Q 043334 649 SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS---AARFLKANIVNIPT 725 (903)
Q Consensus 649 G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~---~~~~~G~~vv~v~~ 725 (903)
|.| -.+.+++.+++..|... .+++++| ++++..++.++++|||+|+++++.|+.+.. .++..|++++.++.
T Consensus 45 g~p-~~~~lE~~la~leg~~~----~v~~ssG-~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~ 118 (397)
T PRK05939 45 GTP-TTAALEAKITKMEGGVG----TVCFATG-MAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA 118 (397)
T ss_pred CCH-HHHHHHHHHHHHhCCCe----EEEeCCH-HHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC
Confidence 444 45668888888877653 4777776 788888898999999999999999976543 45678999999986
Q ss_pred CCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCC-CccCCCCCCCCch
Q 043334 726 ESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSG-LEFNYEGWGGWDL 804 (903)
Q Consensus 726 ~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~-l~f~~~~~s~~s~ 804 (903)
.|++++++++++++ ++|++++|+ ||||.+. ++++|+++|+++|+++|+|++|.. ..++..
T Consensus 119 -------~d~e~l~~~l~~~t-klV~vesp~-NptG~v~---dl~~I~~la~~~gi~livD~t~a~~~~~~~~------- 179 (397)
T PRK05939 119 -------TDVQNVAAAIRPNT-RMVFVETIA-NPGTQVA---DLAGIGALCRERGLLYVVDNTMTSPWLFRPK------- 179 (397)
T ss_pred -------CCHHHHHHhCCCCC-eEEEEECCC-CCCCCHH---hHHHHHHHHHHcCCEEEEECCcccccccCcc-------
Confidence 36899999998877 599999998 9999984 599999999999999999999842 111110
Q ss_pred hhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCc
Q 043334 805 EGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNH 845 (903)
Q Consensus 805 ~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~ 845 (903)
. .+..++++|+||.++.+|.++|++++.+
T Consensus 180 --------~----~gaDivv~S~sK~~~g~g~~igg~v~~~ 208 (397)
T PRK05939 180 --------D----VGASLVINSLSKYIAGHGNALGGAVTDT 208 (397)
T ss_pred --------c----cCCEEEEecCeecccCCCCeEEEEEecC
Confidence 0 1368999999999999999999988853
No 203
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.63 E-value=4.6e-14 Score=159.42 Aligned_cols=190 Identities=15% Similarity=0.092 Sum_probs=141.5
Q ss_pred CCcHHHHHHHHHHHHc-cCCCC------Cc--hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc----
Q 043334 628 PIPSLVKAAIFESFAR-QNMSE------SE--IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL---- 694 (903)
Q Consensus 628 ~~p~~v~~al~~al~~-y~~~~------G~--~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~---- 694 (903)
++|+.+++++.+.+.. +..+. +. .+..+.+++.+++.+|.+.+ +|++|+|+++++..++.+++.
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---~v~~~~g~t~a~~~~l~~l~~~~~~ 85 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE---EVIFTSGATESNNLAILGLARAGEQ 85 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC---eEEEeCCHHHHHHHHHHHHHHhccc
Confidence 4678899998887743 22111 11 13356778888888887644 899999999999988888763
Q ss_pred CC-CeEEEcCCCcHHHHHH---HHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 695 EG-GTLCFPAGSNGNYVSA---ARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 695 pG-D~Vlv~~P~y~~~~~~---~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
+| +.|++....|+.+... ++..|++++.++++. ++.+|++++++.+++++ +++++++|+ ||||.+++ ++
T Consensus 86 ~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~-~lv~~~~~~-n~tG~~~~---~~ 158 (353)
T TIGR03235 86 KGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDT-LLVSIMHVN-NETGSIQP---IR 158 (353)
T ss_pred CCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCC-EEEEEEccc-CCceeccC---HH
Confidence 56 7788887777665443 456799999999864 45689999999998766 589999998 99999998 78
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
+|.++|+++|+++|+|++++.-. .+. + +... +..+++.|..|.+|.+| +|+++++++
T Consensus 159 ~I~~l~~~~~~~~ivD~a~~~g~---~~~---~-------~~~~----~~D~~~~s~~K~~gp~g--~g~l~~~~~ 215 (353)
T TIGR03235 159 EIAEVLEAHEAFFHVDAAQVVGK---ITV---D-------LSAD----RIDLISCSGHKIYGPKG--IGALVIRKR 215 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhcCC---ccc---c-------cccc----CCCEEEeehhhcCCCCc--eEEEEEccC
Confidence 89999999999999999974211 110 0 1111 24677889999887666 899998876
No 204
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.63 E-value=8.8e-15 Score=164.33 Aligned_cols=194 Identities=14% Similarity=0.161 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc------------
Q 043334 631 SLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL------------ 694 (903)
Q Consensus 631 ~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~------------ 694 (903)
..+.+.+...+.. |....+..++++++++++++.+|.+..++ ++++|+|+++++..++.+++.
T Consensus 13 ~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~-~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~ 91 (345)
T cd06450 13 ALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDA-DGVFTSGGSESNLLALLAARDRARKRLKAGGGR 91 (345)
T ss_pred HHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCC-CEEEeCChhHHHHHHHHHHHHHhhhhhhccccc
Confidence 3444555554432 34455678899999999999999873323 799999999999998888753
Q ss_pred CC--CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc------CCCcEEEEECCCCCCcccCCCH
Q 043334 695 EG--GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET------VKKPWVYISGPTINPTGLLYSN 766 (903)
Q Consensus 695 pG--D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~------~~~~~vil~~P~~NPTG~v~s~ 766 (903)
+| +.|+++.++|..+...++..|++++.++++++ +.+|+++|++.+++ ++ +++++++|+ ||||.+.+
T Consensus 92 ~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~-~~v~~~~~~-~~tG~~~~- 166 (345)
T cd06450 92 GIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNP-IMVVATAGT-TDTGAIDP- 166 (345)
T ss_pred ccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCc-EEEEEeccc-CCCCCCCC-
Confidence 33 48899999999999999999999999998753 47999999999976 44 478889998 99999865
Q ss_pred HHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 767 KEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 767 eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+++|.++|+++|+++++|++|+...+..... ... ..... +...+..|++|.++ ++.++|+++.+
T Consensus 167 --~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~------~~~--~~~~~---~~d~~~~s~~K~l~-~p~g~g~~~~~ 230 (345)
T cd06450 167 --LEEIADLAEKYDLWLHVDAAYGGFLLPFPEP------RHL--DFGIE---RVDSISVDPHKYGL-VPLGCSAVLVR 230 (345)
T ss_pred --HHHHHHHHHHhCCeEEEechhhHHHhhChhh------HHH--hcCcc---ccCEEEEchhHhhC-CCcchHHHHHH
Confidence 8899999999999999999997655432211 000 01111 23456779999664 67788987654
No 205
>PRK07505 hypothetical protein; Provisional
Probab=99.63 E-value=1.1e-13 Score=159.22 Aligned_cols=234 Identities=13% Similarity=0.165 Sum_probs=155.3
Q ss_pred CCCCCeEEccCCCCC-CCCcHHHHHHHHHHHHccC-CC----C--CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 612 TPNSGLIHMDVDQSF-LPIPSLVKAAIFESFARQN-MS----E--SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~-~~~p~~v~~al~~al~~y~-~~----~--G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
..|...+|+..+.+. +..++.+.+++.+.+.+++ .. . ...+....+++.+++..|. . .++.++|+.+
T Consensus 43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~---~~~~~sG~~a 117 (402)
T PRK07505 43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--S---VLTFTSCSAA 117 (402)
T ss_pred cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--C---EEEECChHHH
Confidence 457788999654322 2458889999999887653 11 1 1245677888888888775 3 5778888765
Q ss_pred HHHHHHHHh----ccCCC-eEEEcCCCc-HHHHH--HHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECC
Q 043334 684 LFNKLVLCC----ILEGG-TLCFPAGSN-GNYVS--AARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGP 755 (903)
Q Consensus 684 al~~ll~~l----~~pGD-~Vlv~~P~y-~~~~~--~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P 755 (903)
.... +..+ ..+|+ .|++.+..| +.... .....+.+++.+|. .|++.+++++++++ +++++++|
T Consensus 118 ~~~a-i~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~-~~~vl~~p 188 (402)
T PRK07505 118 HLGI-LPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNK-TVAYVADG 188 (402)
T ss_pred HHHH-HHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCC-CEEEEEec
Confidence 5433 3322 22233 355666544 33221 12224567777775 37889999887665 58999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc-CCCCCCceEEEccCchhcccc
Q 043334 756 TINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS-STNSSFNVSLLGGLSLKMLTG 834 (903)
Q Consensus 756 ~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~-~~~~~~~vI~l~S~SK~~g~~ 834 (903)
+ ||||.+++ +++|.++|+++|+++|+||+|+...|+.... .+. ...++. .+ +++++++||||.|+++
T Consensus 189 ~-~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~-~~~----~~~~~~~~~---d~~i~~~s~sK~~~~~ 256 (402)
T PRK07505 189 V-YSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGE-GYV----RSELDYRLN---ERTIIAASLGKAFGAS 256 (402)
T ss_pred c-cccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCC-chH----HHHcCCCCC---CCeEEEEechhhhhcc
Confidence 8 99999999 6788888999999999999997555543321 011 112221 22 5899999999999988
Q ss_pred cceeeEEEeCcHHHHHHHHhCCCC----CCCcHHHHHHHHHHHh
Q 043334 835 ALKFGFLVLNHPQLVDAFSSFPGL----SKPHSTVRYAIKKLLG 874 (903)
Q Consensus 835 GlRiG~lv~~~~~li~~l~~~~~~----~~~s~~~Q~aa~~~L~ 874 (903)
| ||++++++++++.+...... .+++..+..++.+.++
T Consensus 257 G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 257 G---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred C---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 7 89886554588888775431 2345567777777764
No 206
>PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional
Probab=99.62 E-value=5.4e-15 Score=166.25 Aligned_cols=139 Identities=21% Similarity=0.289 Sum_probs=105.6
Q ss_pred ccCCcccCc--chh-HHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc
Q 043334 3 VIPSIFIPE--DWS-FTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL 79 (903)
Q Consensus 3 ~~p~vfiP~--~w~-~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl 79 (903)
..||||... |-. ..|++.+... .+.+|||+|||+|.+++.+++..|..+|+++|+|+.|++.|++|+..|+.
T Consensus 203 ~~~gVFs~~~LD~GtrllL~~lp~~-----~~~~VLDLGCGtGvi~i~la~~~P~~~V~~vD~S~~Av~~A~~N~~~n~~ 277 (378)
T PRK15001 203 NHANVFSRTGLDIGARFFMQHLPEN-----LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 (378)
T ss_pred ecCCccCCCCcChHHHHHHHhCCcc-----cCCeEEEEeccccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCc
Confidence 469999996 433 3334443321 23699999999999999999999999999999999999999999988864
Q ss_pred ccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccc
Q 043334 80 DEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGF 159 (903)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~ 159 (903)
+. ..+++++.+|+.+.... .+||+|++||||+.... +..
T Consensus 278 ~~-------------~~~v~~~~~D~l~~~~~--~~fDlIlsNPPfh~~~~---~~~----------------------- 316 (378)
T PRK15001 278 EA-------------LDRCEFMINNALSGVEP--FRFNAVLCNPPFHQQHA---LTD----------------------- 316 (378)
T ss_pred cc-------------CceEEEEEccccccCCC--CCEEEEEECcCcccCcc---CCH-----------------------
Confidence 20 13789999998775433 37999999999985322 111
Q ss_pred ccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCC
Q 043334 160 VEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRP 194 (903)
Q Consensus 160 v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~ 194 (903)
....++++++.++|+|||.+++......
T Consensus 317 -------~ia~~l~~~a~~~LkpGG~L~iV~nr~l 344 (378)
T PRK15001 317 -------NVAWEMFHHARRCLKINGELYIVANRHL 344 (378)
T ss_pred -------HHHHHHHHHHHHhcccCCEEEEEEecCc
Confidence 1123789999999999999999875433
No 207
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.62 E-value=5.9e-14 Score=160.31 Aligned_cols=238 Identities=13% Similarity=0.092 Sum_probs=159.6
Q ss_pred CCcHHHHHHHHHHHHccCC-C--------CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc-----
Q 043334 628 PIPSLVKAAIFESFARQNM-S--------ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI----- 693 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~~-~--------~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~----- 693 (903)
++++.+.+++.+.+..+.. . .+.+.++++++++.+. .|.. +++ +|++|+|+++++..++.++.
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~-~~~~-~~~-~i~~t~g~teal~~~~~~~~~~~~~ 86 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKG-INAR-DLD-DIIITSCATESNNWVLKGVYFDEIL 86 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHH-cCcC-CCC-eEEEeCCHHHHHHHHHHHHHHhhcc
Confidence 3566789988887765221 1 1234566666666543 4442 334 89999999999999888762
Q ss_pred cC-CCeEEEcCCCcHHHHHH---HHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 694 LE-GGTLCFPAGSNGNYVSA---ARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 694 ~p-GD~Vlv~~P~y~~~~~~---~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
++ ||+|+++.+.|+.+... ++..|++++.+|+++ ++.+|++.+++.+++++ +++++++|+ ||||.+++ +
T Consensus 87 ~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t-~lv~~~~~~-n~tG~~~~---~ 159 (382)
T TIGR03403 87 KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKT-ALVSVMWAN-NETGMIFP---I 159 (382)
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCC-eEEEEEccc-CCCccccC---H
Confidence 45 46899998777665544 466899999999874 35689999999998776 589999998 99999999 6
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHH-H
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQ-L 848 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~-l 848 (903)
++|.++|+++|+++++|++++. ...+. + +... +..+++.|++|.+|.+| +|++...+.. +
T Consensus 160 ~~I~~la~~~g~~~ivD~a~~~---g~~~~---~-------~~~~----~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~ 220 (382)
T TIGR03403 160 KEIGEICKERGVLFHTDAVQAI---GKIPV---D-------VQKA----GVDFLSFSAHKFHGPKG--VGGLYIRKGVEL 220 (382)
T ss_pred HHHHHHHHHcCCEEEEechhhc---CCCcc---C-------cccc----CCCEEEEcchhhCCCCc--eEEEEECCCCCC
Confidence 6888889999999999999752 11110 0 1111 24588899999888788 5888765431 1
Q ss_pred HHHHH---hC--CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 849 VDAFS---SF--PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 849 i~~l~---~~--~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
...+. .. .....++.+.+.++..++.. ..++++..++.+++.++.+
T Consensus 221 ~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~-------~~~~~~~~~~~~~~l~~~l 271 (382)
T TIGR03403 221 TPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRL-------ANEYLDFEKSHVRRLRDRL 271 (382)
T ss_pred CCcccCCCCCCCcccCCcChHHHHHHHHHHHH-------HHHhHHHHHHHHHHHHHHH
Confidence 01110 01 11445777778777777731 1223444455555555544
No 208
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.62 E-value=2.2e-14 Score=162.86 Aligned_cols=181 Identities=14% Similarity=0.148 Sum_probs=128.6
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCCCC
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTESEV 729 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~~~ 729 (903)
...+++.+++.++ ++ .+++++|+ +++..++.+++++||+|++++|+|..+...+ +..|++++.++.++.
T Consensus 53 ~~~Le~~lA~l~~----~~-~v~~~sG~-~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~- 125 (366)
T PRK07582 53 WRALEAALGELEG----AE-ALVFPSGM-AAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGM- 125 (366)
T ss_pred HHHHHHHHHHHcC----CC-EEEECCHH-HHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCCh-
Confidence 3445555555441 12 56666665 6888888889999999999999999887654 457999999987531
Q ss_pred CcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhh
Q 043334 730 GFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLS 809 (903)
Q Consensus 730 ~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~ 809 (903)
+ + .+.+++ ++|++++|+ ||||.+.+ +++|+++|+++|+++|+|++|.. +.+.. + +.
T Consensus 126 -~----~----~~~~~t-~lV~le~p~-NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~--~~~~~-------p-~~ 181 (366)
T PRK07582 126 -A----E----AALAGA-DLVLAETPS-NPGLDVCD---LAALAAAAHAAGALLVVDNTTAT--PLGQR-------P-LE 181 (366)
T ss_pred -H----H----HhccCc-eEEEEECCC-CCCCCccC---HHHHHHHHHHcCCEEEEECCCCC--ccccC-------c-hh
Confidence 1 1 222445 589999998 99998876 89999999999999999999952 11111 1 11
Q ss_pred hhccCCCCCCceEEEccCchhcc-cccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 810 KLYSSTNSSFNVSLLGGLSLKML-TGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 810 ~l~~~~~~~~~vI~l~S~SK~~g-~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
+ +..++++|+||.++ .+|+|+||++++++++++.+..... ...++....+.+...|
T Consensus 182 -~-------g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l 240 (366)
T PRK07582 182 -L-------GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSL 240 (366)
T ss_pred -c-------CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 1 13478899999984 4679999999876658888876543 3445566666555555
No 209
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.62 E-value=8.5e-14 Score=158.16 Aligned_cols=185 Identities=12% Similarity=0.116 Sum_probs=135.4
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc------cCCCeEEEcCCCcHHHHHHHHHcCCEEEE
Q 043334 649 SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI------LEGGTLCFPAGSNGNYVSAARFLKANIVN 722 (903)
Q Consensus 649 G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~------~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~ 722 (903)
|..++.+.+++.+++.+|.+.. ++++++|+++++..++.++. ++||+|++++++|..+...++..|++++.
T Consensus 56 ~~~~~~~~~~~~la~~~g~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~ 132 (373)
T TIGR03812 56 GTKKIEEEVVGSLGNLLHLPDA---YGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRY 132 (373)
T ss_pred cHHHHHHHHHHHHHHHhCCCCC---CeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEE
Confidence 4556668889999999998644 68889999999887776654 47799999999999999999999999999
Q ss_pred ecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccC--CCCCC
Q 043334 723 IPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFN--YEGWG 800 (903)
Q Consensus 723 v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~--~~~~s 800 (903)
++.+. ++.+|++++++.+++++. .++++.|+ ||||.+.+ +++|.++|+++|+++|+|++|...... .....
T Consensus 133 v~~~~--~~~~d~~~l~~~l~~~~~-~vv~~~~~-~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~ 205 (373)
T TIGR03812 133 APLDE--DYTVDVKDVEDLIDDNTI-GIVGIAGT-TELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYN 205 (373)
T ss_pred EeeCC--CCCcCHHHHHHHHhhCcE-EEEEECCC-CCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCC
Confidence 99863 577999999999987663 56666687 99999977 778888899999999999999644321 00000
Q ss_pred CCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH
Q 043334 801 GWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 801 ~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~ 853 (903)
.. . +. +... .-..+..|..| |++++.|+|+++..++++++.+.
T Consensus 206 ~~---~-~d-~~~~----~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~ 248 (373)
T TIGR03812 206 PP---P-FD-FSLP----GVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLS 248 (373)
T ss_pred CC---C-cc-ccCC----CCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhc
Confidence 00 0 00 0000 11234456779 77788899977654444777764
No 210
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.62 E-value=8.3e-14 Score=160.30 Aligned_cols=200 Identities=12% Similarity=0.061 Sum_probs=148.8
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccC--CCCCc-------hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQN--MSESE-------IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~--~~~G~-------~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
.+.|+.+... ++|+.+++++...+..+. +..+. .+..+.+++.+++.+|.+.+ +|++|+|+++++..
T Consensus 4 ~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---~v~~~~g~t~a~~~ 79 (402)
T TIGR02006 4 PIYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR---EIVFTSGATESNNL 79 (402)
T ss_pred cEEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC---eEEEeCCHHHHHHH
Confidence 3667766654 567888998877764321 11111 13455667778888887544 89999999999998
Q ss_pred HHHHhc----cCCCeEEEcCCCcHHHHHHH---HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCc
Q 043334 688 LVLCCI----LEGGTLCFPAGSNGNYVSAA---RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPT 760 (903)
Q Consensus 688 ll~~l~----~pGD~Vlv~~P~y~~~~~~~---~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPT 760 (903)
++.++. ++||.|+++.++|+.+...+ +..|++++.++++. ++.+|++.+++.+++++ +++++++|+ |||
T Consensus 80 ~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~-~lv~v~~~~-n~t 155 (402)
T TIGR02006 80 AIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRDDT-ILVSIMHVN-NEI 155 (402)
T ss_pred HHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCC-EEEEEECCC-cCc
Confidence 876653 68999999999999866554 45699999999864 45689999999998766 589999998 999
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
|.+.+ +++|.++|+++|+++++|++++.- ..+ .+ +... +..+++.|..|.+|.+| +|+
T Consensus 156 G~~~~---~~~I~~l~~~~g~~livD~a~a~g---~~~---~~-------~~~~----~~D~~~~s~~K~~gp~G--~G~ 213 (402)
T TIGR02006 156 GVIQD---IAAIGEICRERKVFFHVDAAQSVG---KIP---IN-------VNEL----KVDLMSISGHKIYGPKG--IGA 213 (402)
T ss_pred eeccc---HHHHHHHHHHcCCEEEEEcchhcC---Ccc---cC-------cccc----CCCEEEEehhhhcCCCc--eEE
Confidence 99987 778899999999999999998521 111 01 1111 24678888889887557 899
Q ss_pred EEeCcH
Q 043334 841 LVLNHP 846 (903)
Q Consensus 841 lv~~~~ 846 (903)
+++.++
T Consensus 214 l~~~~~ 219 (402)
T TIGR02006 214 LYVRRK 219 (402)
T ss_pred EEEccC
Confidence 888764
No 211
>PRK14012 cysteine desulfurase; Provisional
Probab=99.62 E-value=6.9e-14 Score=161.05 Aligned_cols=199 Identities=14% Similarity=0.079 Sum_probs=148.4
Q ss_pred EEccCCCCCCCCcHHHHHHHHHHHH--c-cCCC-C-----Cc--hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 618 IHMDVDQSFLPIPSLVKAAIFESFA--R-QNMS-E-----SE--IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 618 IdLs~g~p~~~~p~~v~~al~~al~--~-y~~~-~-----G~--~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
|.|+.+... ++|+.+.+++.+.+. . +... . +. .+..+.+++.+++.+|.+.+ +|++++|+++++.
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~---~v~~~~g~t~al~ 80 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR---EIVFTSGATESDN 80 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC---eEEEeCCHHHHHH
Confidence 566666554 567888888888765 2 2111 1 11 13456677888888887644 7999999999999
Q ss_pred HHHHHhc----cCCCeEEEcCCCcHHHHHHHH---HcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCC
Q 043334 687 KLVLCCI----LEGGTLCFPAGSNGNYVSAAR---FLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINP 759 (903)
Q Consensus 687 ~ll~~l~----~pGD~Vlv~~P~y~~~~~~~~---~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NP 759 (903)
.++.++. ++||.|+++.++|+.+...++ ..|++++.++++. ++.+|++.+++++++++ +++++++++ ||
T Consensus 81 ~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t-~lv~~~~~~-n~ 156 (404)
T PRK14012 81 LAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDT-ILVSIMHVN-NE 156 (404)
T ss_pred HHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCC-EEEEEECcC-CC
Confidence 8877664 789999999999988765543 4699999999864 46789999999998877 589999998 99
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
||.+++ +++|.++|+++|++||+|++++. +..+. + +. .. +..+++.|++|.+| |+ ++|
T Consensus 157 tG~~~~---~~~I~~la~~~g~~vivD~a~~~---g~~~~---~----~~---~~----~~D~~~~s~~K~~g-p~-g~G 214 (404)
T PRK14012 157 IGVIQD---IAAIGEICRERGIIFHVDAAQSV---GKVPI---D----LS---KL----KVDLMSFSAHKIYG-PK-GIG 214 (404)
T ss_pred ccchhh---HHHHHHHHHHcCCEEEEEcchhc---CCccc---C----cc---cC----CCCEEEEehhhccC-CC-ceE
Confidence 999998 78889999999999999999852 11110 1 11 11 24567779999776 44 689
Q ss_pred EEEeCcH
Q 043334 840 FLVLNHP 846 (903)
Q Consensus 840 ~lv~~~~ 846 (903)
+++++++
T Consensus 215 ~l~~~~~ 221 (404)
T PRK14012 215 ALYVRRK 221 (404)
T ss_pred EEEEecC
Confidence 9988865
No 212
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.61 E-value=3.7e-14 Score=164.25 Aligned_cols=262 Identities=13% Similarity=0.091 Sum_probs=165.7
Q ss_pred cCCCCCeEEccCCCCC--CC-CcHHHHHHHHHHHHccCCCCC-chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 611 ETPNSGLIHMDVDQSF--LP-IPSLVKAAIFESFARQNMSES-EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 611 ~~~~~~~IdLs~g~p~--~~-~p~~v~~al~~al~~y~~~~G-~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
...|...+|+..|... ++ .++.+.+++.+.+.+... ++ ..+....+++.+.+.+... + +|++++|+++++.
T Consensus 44 d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~~~~~lae~l~~~~~~~---~-~v~~~~sGseA~e 118 (423)
T TIGR00713 44 DVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTS-YGAPTEAEILLAKEIISRVPSV---E-MVRFVNSGTEATM 118 (423)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc-CCCCCHHHHHHHHHHHHhCCcc---c-EEEEeCCHHHHHH
Confidence 4578889999877644 33 678899999888765321 11 1222334444444433321 3 7999999999999
Q ss_pred HHHHHhc--cCCCeEEEcCCCcHHHHHHHHH---cCCEEEEecCCCC-------CCcc---cCHHHHHHHhhcC--CCcE
Q 043334 687 KLVLCCI--LEGGTLCFPAGSNGNYVSAARF---LKANIVNIPTESE-------VGFK---MTEKTLVTILETV--KKPW 749 (903)
Q Consensus 687 ~ll~~l~--~pGD~Vlv~~P~y~~~~~~~~~---~G~~vv~v~~~~~-------~~f~---ld~~~L~~~l~~~--~~~~ 749 (903)
.++.... ...++|+...++|.++...+.. .|......+..+. +.+. .|++++++.++.. +..+
T Consensus 119 ~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aa 198 (423)
T TIGR00713 119 SAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAG 198 (423)
T ss_pred HHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEE
Confidence 8777532 2458999999999886543332 1111111111100 0000 2789999888632 2234
Q ss_pred EEEE-CCCCCCcccCCC-HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccC
Q 043334 750 VYIS-GPTINPTGLLYS-NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGL 827 (903)
Q Consensus 750 vil~-~P~~NPTG~v~s-~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~ 827 (903)
|++. .|+ | +|.+.+ .+.+++|.++|++||+++|+||+|.++.++... ......-.| + +.+|
T Consensus 199 vi~ep~~~-~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~--------~~~~~~~~p---D----i~t~ 261 (423)
T TIGR00713 199 VIVEPVAG-N-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGG--------AQEYFGVEP---D----LTTL 261 (423)
T ss_pred EEEeCCCC-C-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcch--------hHHHhCCCc---c----hhhh
Confidence 5443 454 7 798888 689999999999999999999999877553221 011112222 2 3479
Q ss_pred chhcccccceeeEEEeCcHHHHHHHHhCC-----CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 828 SLKMLTGALKFGFLVLNHPQLVDAFSSFP-----GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 828 SK~~g~~GlRiG~lv~~~~~li~~l~~~~-----~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
||.++ +|+|+||++++++ +++.+.... .+.+.+++.|.++.++|+.-.. + ++.+..++.++.+++.+
T Consensus 262 sK~l~-~G~pig~v~~~~~-i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~--~---~~~~~~~~~~~~~~~~l 333 (423)
T TIGR00713 262 GKIIG-GGLPVGAFGGRRE-IMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDE--E---GVYTELDELAKRLAEGL 333 (423)
T ss_pred hhhhc-CCCceeeeeEHHH-HHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhc--c---cHHHHHHHHHHHHHHHH
Confidence 99998 9999999999987 999886421 2667889999999988852111 1 23445555555555443
No 213
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.61 E-value=1e-13 Score=157.34 Aligned_cols=203 Identities=12% Similarity=0.094 Sum_probs=149.9
Q ss_pred CCcHHHHHHHHHHHHcc-CC---CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc----CCCeE
Q 043334 628 PIPSLVKAAIFESFARQ-NM---SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL----EGGTL 699 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y-~~---~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~----pGD~V 699 (903)
++.+.+.+++.+.+... +. ..+..++.+.+++++++.+|.+.. ++++++|+++++..++.++.. +||+|
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~---~~~~~~ggt~a~~~a~~~~~~~~~~~~~~v 107 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDA---YGYITSGGTEANIQAVRAARNLAKAEKPNI 107 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC---CeEEecCcHHHHHHHHHHHHhhccCCCceE
Confidence 45566778877776542 11 124455557888999999997644 688899999999888776654 57899
Q ss_pred EEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhC
Q 043334 700 CFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKY 779 (903)
Q Consensus 700 lv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~ 779 (903)
++.+++|..+...++..|++++.+|.+. ++.+|++.|++.+++++ +.|+++.++ ||||.+.+ +++|.++|+++
T Consensus 108 l~~~~~h~s~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~-~~vi~~~~~-~~tG~~~~---l~~I~~l~~~~ 180 (371)
T PRK13520 108 VVPESAHFSFDKAADMLGVELRRAPLDD--DYRVDVKAVEDLIDDNT-IGIVGIAGT-TELGQVDP---IPELSKIALEN 180 (371)
T ss_pred EecCcchHHHHHHHHHcCceEEEecCCC--CCcCCHHHHHHHHhhCC-EEEEEEcCC-cCCcccCC---HHHHHHHHHHc
Confidence 9999999999999999999999999863 45689999999998766 477788888 99999988 88888899999
Q ss_pred CcEEEEecCCCCCcc--CCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH
Q 043334 780 GARVVIDTAFSGLEF--NYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 780 ~i~VI~DeaY~~l~f--~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~ 853 (903)
|+++++|++|..+.. ..... .+. +... +...+..|..| ++++|.++|+++..++++++.+.
T Consensus 181 g~~livD~a~~~~~~~~~~~~~-~~~-------~~~~----~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~ 243 (371)
T PRK13520 181 GIFLHVDAAFGGFVIPFLDDPP-NFD-------FSLP----GVDSITIDPHK-MGLAPIPAGGILFRDESYLDALA 243 (371)
T ss_pred CCCEEEEecchhHHHHhhcCCC-Ccc-------ccCC----CCceEEECCcc-ccCccCCceEEEEcCHHHHHhhc
Confidence 999999999975432 11110 000 0000 12334456677 66788999988876655777764
No 214
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.61 E-value=4.3e-14 Score=160.99 Aligned_cols=171 Identities=15% Similarity=0.193 Sum_probs=129.2
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHH-HHH---HHHHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGN-YVS---AARFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~-~~~---~~~~~G~~vv~v~~~ 726 (903)
.+....+++.+++..|.+. .+++++|. +++..++ .+++|||+|++++|+|+. |.. .++..|++++.++.
T Consensus 49 ~p~~~~Le~~lA~l~g~~~----~~~~~sG~-aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~- 121 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHA----GFAFGSGM-AAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT- 121 (377)
T ss_pred ChHHHHHHHHHHHHhCCCc----eEEeCCHH-HHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC-
Confidence 3456778888888888643 48888885 5666554 578999999999999984 432 34557999999874
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
.|++.+++++++++ ++|++++|+ ||||.+.+ +++|.++|+++|+++|+|++|+...+. .+
T Consensus 122 ------~d~~~l~~ai~~~t-klV~le~P~-NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~-~p-------- 181 (377)
T PRK07671 122 ------SNLEEVEEAIRPNT-KAIYVETPT-NPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ-SP-------- 181 (377)
T ss_pred ------CCHHHHHHhcCCCC-eEEEEECCC-CCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC-Ch--------
Confidence 37899999998877 599999998 99999976 888888899999999999999643222 11
Q ss_pred hhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhCCC
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~~~ 857 (903)
+. . +..++++|+||.++.++ .-.|+++++++++++.+...+.
T Consensus 182 -~~----~----g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~ 224 (377)
T PRK07671 182 -IS----L----GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQN 224 (377)
T ss_pred -hh----h----CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHH
Confidence 11 1 24699999999998554 3457788876658888776554
No 215
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.61 E-value=4.3e-14 Score=163.78 Aligned_cols=265 Identities=10% Similarity=0.022 Sum_probs=171.2
Q ss_pred cCCCCCeEEccCCCCCCC---CcHHHHHHHHHHHHccCCC----CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH-
Q 043334 611 ETPNSGLIHMDVDQSFLP---IPSLVKAAIFESFARQNMS----ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ- 682 (903)
Q Consensus 611 ~~~~~~~IdLs~g~p~~~---~p~~v~~al~~al~~y~~~----~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~- 682 (903)
...|...+|+..|..... .++.+.+++.+.+.++... .+. +...++++.+....+.+..+. .+++++|+.
T Consensus 37 d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~~~~~~~~-~~f~~sGsea 114 (425)
T PRK08088 37 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAY-EPYLELCEKMNQKVPGDFAKK-TLLVTTGSEA 114 (425)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCC-HHHHHHHHHHHHhCCCCCCCE-EEEeCCcHHH
Confidence 356778899977654333 4788888998888764321 123 344578888888666544322 456666665
Q ss_pred --HHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEE----------------EecCCCCCCcccC--HHHHHHHh
Q 043334 683 --SLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIV----------------NIPTESEVGFKMT--EKTLVTIL 742 (903)
Q Consensus 683 --~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv----------------~v~~~~~~~f~ld--~~~L~~~l 742 (903)
.++.++ ..+.+++ .|+...++|-+....+...+.... ++|.+. ++...+ ++.+++.+
T Consensus 115 ~e~Alkla-r~~~~r~-~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l 191 (425)
T PRK08088 115 VENAVKIA-RAATKRS-GVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIF 191 (425)
T ss_pred HHHHHHHH-HHHhCCC-eEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHH
Confidence 455542 3344444 456668888876655544433211 122211 111111 45688777
Q ss_pred hc---CCCcEEEEECCC-CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCC
Q 043334 743 ET---VKKPWVYISGPT-INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSS 818 (903)
Q Consensus 743 ~~---~~~~~vil~~P~-~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~ 818 (903)
.. ....+.++..|. +||.+...+.+.+++|.++|+++|+++|+||+|.++.+.+... .+...
T Consensus 192 ~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-------~~~~~------- 257 (425)
T PRK08088 192 KNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-------AMEQM------- 257 (425)
T ss_pred HhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-------HHhhc-------
Confidence 52 122467777788 8998889999999999999999999999999998765544321 11111
Q ss_pred CceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHH
Q 043334 819 FNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLES 896 (903)
Q Consensus 819 ~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~ 896 (903)
+.+.-+.||||.++ +|+|+||++++.+ +++.+..... +.+.+.+.|.++..+|+ ... .+++++.+++..+.
T Consensus 258 ~~~pdi~s~sK~l~-~G~rig~v~~~~~-~~~~~~~~~~~~t~~~~~~~~~a~~~~l~--~~~---~~~~~~~~~~~~~~ 330 (425)
T PRK08088 258 GVAADLTTFAKSIA-GGFPLAGVTGRAE-VMDAIAPGGLGGTYAGNPIACAAALAVLK--VFE---QENLLQKANALGEK 330 (425)
T ss_pred CCCCCEEEEecccc-CCCcceeeEecHH-HHhhcCCCCCCCCCCcCHHHHHHHHHHHH--HHH---hcCHHHHHHHHHHH
Confidence 13445899999998 9999999999987 8888875443 67788999999999995 221 12455555555444
Q ss_pred HHHHH
Q 043334 897 RSKRL 901 (903)
Q Consensus 897 Rr~~l 901 (903)
+++.+
T Consensus 331 ~~~~l 335 (425)
T PRK08088 331 LKDGL 335 (425)
T ss_pred HHHHH
Confidence 44433
No 216
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.61 E-value=5.4e-14 Score=160.31 Aligned_cols=240 Identities=12% Similarity=0.067 Sum_probs=164.5
Q ss_pred CCCCCeEEccCCCC--CCC-CcHHHHHHHHHHHHccC--CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQS--FLP-IPSLVKAAIFESFARQN--MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~-~p~~v~~al~~al~~y~--~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..|.. .++ .++.+.+++.+.+.++. ......+++.++++++.+..+. + .++++++++++..
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~---~~~~~~sG~~a~~ 100 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAG--D---LVFFCNSGAEANE 100 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCC--C---EEEEeCCcHHHHH
Confidence 46778899977752 223 67889999999887632 1234567888899988876542 2 6888888888888
Q ss_pred HHHHHh-ccCC-CeEEEcCCCcHHHHH-HHHHcCCEEE---EecCCCCCCcc--cCHHHHHHHhhcCCCcEEEEECCCCC
Q 043334 687 KLVLCC-ILEG-GTLCFPAGSNGNYVS-AARFLKANIV---NIPTESEVGFK--MTEKTLVTILETVKKPWVYISGPTIN 758 (903)
Q Consensus 687 ~ll~~l-~~pG-D~Vlv~~P~y~~~~~-~~~~~G~~vv---~v~~~~~~~f~--ld~~~L~~~l~~~~~~~vil~~P~~N 758 (903)
.++... ..+| +.|++.+++|..... .....|.... ..|+..+..+. .|++.+++.+.+++ +++++..+. |
T Consensus 101 ~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~ii~e~i~-~ 178 (377)
T PRK02936 101 AALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEV-AAVMLEVVQ-G 178 (377)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCe-EEEEEeccc-C
Confidence 877743 2244 578888888864322 2222222111 11111110111 27899999887655 477777775 9
Q ss_pred CcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce
Q 043334 759 PTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK 837 (903)
Q Consensus 759 PTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR 837 (903)
++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+... . .....-.+ + +.+|||+++ +|+|
T Consensus 179 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~---~----~~~~~~~~---d----i~t~sK~l~-~G~~ 243 (377)
T PRK02936 179 EGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF---A----YEQFGLDP---D----IVTVAKGLG-NGIP 243 (377)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh---H----HHhhCCCC---c----EEEEccccc-CCCc
Confidence 99877 588999999999999999999999998776655431 1 11121111 2 237999998 8999
Q ss_pred eeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 838 FGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 838 iG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
+||++++++ +++.+..... +.+.+++.|.++.++|+
T Consensus 244 ig~v~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 281 (377)
T PRK02936 244 VGAMIGKKE-LGTAFGPGSHGSTFGGNPLAMAAAKEVLQ 281 (377)
T ss_pred cEEEEEcHH-HHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999887 8888865432 56788999999999995
No 217
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.61 E-value=6e-14 Score=159.95 Aligned_cols=169 Identities=12% Similarity=0.082 Sum_probs=129.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCCCC
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTESE 728 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~~~ 728 (903)
.++++++.+++.+|.+ +++++++++.++..++. ++++||+|+++++.|+.+... +...|++++.+++.
T Consensus 48 ~~~~le~~la~l~g~~-----~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-- 119 (378)
T TIGR01329 48 TRTALESLLAKLDKAD-----RAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT-- 119 (378)
T ss_pred HHHHHHHHHHHHhCCC-----cEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC--
Confidence 4788999999988862 34444444568887665 789999999999999987653 45689999999862
Q ss_pred CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 729 VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
|++.+++++++++ ++|++++|+ ||||.+.+ +++|+++|+++|+++|+|++|..-. ... + +
T Consensus 120 -----d~~~le~~i~~~t-klv~le~ps-nptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~-~~~--------~-l 179 (378)
T TIGR01329 120 -----DLDKVKAALGPKT-KLVLLESPT-NPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL-LCN--------P-L 179 (378)
T ss_pred -----CHHHHHHhcCcCc-eEEEEECCC-CCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc-cCC--------h-h
Confidence 6899999998776 599999998 99999987 8999999999999999999984211 111 1 1
Q ss_pred hhhccCCCCCCceEEEccCchhcccc-cceeeEEEeCcHHHHHHHHhCCC
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTG-ALKFGFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~~li~~l~~~~~ 857 (903)
. + +-.++++|++|.++.+ |.+.|+++++++.+.+++.....
T Consensus 180 ~-~-------g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~ 221 (378)
T TIGR01329 180 E-L-------GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQN 221 (378)
T ss_pred h-c-------CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHH
Confidence 1 1 2468999999988653 57899999977657676765443
No 218
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.60 E-value=2.2e-13 Score=153.26 Aligned_cols=234 Identities=12% Similarity=0.154 Sum_probs=185.0
Q ss_pred CCCCeEEccCCC-CCCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNSGLIHMDVDQ-SFLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.+.+++||+.++ ..+...+.++++..+++.+|+. ..|..++...+++.+++++|.+.. +++++|-.+.
T Consensus 37 ~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~a----l~f~SGy~AN 112 (388)
T COG0156 37 DGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAA----LLFSSGFVAN 112 (388)
T ss_pred CCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcE----EEEcccchhH
Confidence 467789988665 3355678899999999988643 357788889999999999998744 8899998887
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC-----CCcEEEEECCCCCC
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV-----KKPWVYISGPTINP 759 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-----~~~~vil~~P~~NP 759 (903)
+.. +.+++++||.|+...-.+.+....++..+++++.+.. .|+++|++.+++. .+++|+...-- ..
T Consensus 113 ~~~-i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVf-SM 183 (388)
T COG0156 113 LGL-LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGVF-SM 183 (388)
T ss_pred HHH-HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEeccc-cC
Confidence 774 7899999999999999999999999999999999976 3689999988762 13577777777 88
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
.|.+.+ +.+|++++++|+.++++||+|+--.+++... .....+.-.+ .+..|.++||||.+|..| |
T Consensus 184 dGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~Gr------G~~e~~g~~~--~~vdi~~gTlsKAlGs~G---g 249 (388)
T COG0156 184 DGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGR------GLAEHFGLEP--EEVDIIVGTLGKALGSSG---G 249 (388)
T ss_pred CCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCc------cHHHHhCCCC--ccceEEEEEchhhhcccC---c
Confidence 999988 9999999999999999999999888876553 2233332211 246899999999999988 9
Q ss_pred EEEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 840 FLVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 840 ~lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
|+.++.. +++.+..... +.+.++..-.++..+|+
T Consensus 250 ~v~g~~~-~~d~L~~~ar~~ifStalpP~~aaa~~~al~ 287 (388)
T COG0156 250 YIAGSAA-LIDYLRNRARPFIFSTALPPAVAAAALAALR 287 (388)
T ss_pred eeeCcHH-HHHHHHHhCCceeccCCCCHHHHHHHHHHHH
Confidence 9999988 9999887643 44455555555566663
No 219
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=99.60 E-value=4e-15 Score=140.50 Aligned_cols=115 Identities=29% Similarity=0.377 Sum_probs=89.9
Q ss_pred CCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR 110 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~ 110 (903)
|.+|||+|||+|.+++.+++.. ..+++|+|+|+.+++.|+.|+..+++ .++++++++|+.+...
T Consensus 1 g~~vlD~~~G~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~---------------~~~~~~~~~D~~~~~~ 64 (117)
T PF13659_consen 1 GDRVLDPGCGSGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGL---------------DDRVEVIVGDARDLPE 64 (117)
T ss_dssp TEEEEEETSTTCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTT---------------TTTEEEEESHHHHHHH
T ss_pred CCEEEEcCcchHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccC---------------CceEEEEECchhhchh
Confidence 4689999999999999999886 68999999999999999999988876 3689999999988862
Q ss_pred -CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 111 -DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 111 -~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
...++||+|++||||......... ....+..+++++.++|||||.+++.
T Consensus 65 ~~~~~~~D~Iv~npP~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~L~~gG~~~~~ 114 (117)
T PF13659_consen 65 PLPDGKFDLIVTNPPYGPRSGDKAA------------------------------LRRLYSRFLEAAARLLKPGGVLVFI 114 (117)
T ss_dssp TCTTT-EEEEEE--STTSBTT----------------------------------GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCceeEEEEECCCCccccccchh------------------------------hHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 223589999999999854221110 0113558999999999999999987
Q ss_pred eC
Q 043334 190 MG 191 (903)
Q Consensus 190 ~~ 191 (903)
.+
T Consensus 115 ~~ 116 (117)
T PF13659_consen 115 TP 116 (117)
T ss_dssp EE
T ss_pred eC
Confidence 54
No 220
>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]
Probab=99.60 E-value=1.4e-14 Score=154.98 Aligned_cols=139 Identities=22% Similarity=0.300 Sum_probs=108.1
Q ss_pred cccCCcccCc--chhH-HHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcc
Q 043334 2 MVIPSIFIPE--DWSF-TFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNA 78 (903)
Q Consensus 2 ~~~p~vfiP~--~w~~-~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~g 78 (903)
...||||.=. |... -+++.|.... +.+|||+|||.|.+++.+++..|..+++.+|+|..+|+.|++|+..|+
T Consensus 132 ~t~pGVFS~~~lD~GS~lLl~~l~~~~-----~~~vlDlGCG~Gvlg~~la~~~p~~~vtmvDvn~~Av~~ar~Nl~~N~ 206 (300)
T COG2813 132 KTLPGVFSRDKLDKGSRLLLETLPPDL-----GGKVLDLGCGYGVLGLVLAKKSPQAKLTLVDVNARAVESARKNLAANG 206 (300)
T ss_pred EeCCCCCcCCCcChHHHHHHHhCCccC-----CCcEEEeCCCccHHHHHHHHhCCCCeEEEEecCHHHHHHHHHhHHHcC
Confidence 3578999885 4443 3344444332 349999999999999999999999999999999999999999999998
Q ss_pred cccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccc
Q 043334 79 LDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQG 158 (903)
Q Consensus 79 l~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~ 158 (903)
++ +..++.+|+.+.... +||+||||||++..... .
T Consensus 207 ~~----------------~~~v~~s~~~~~v~~---kfd~IisNPPfh~G~~v---~----------------------- 241 (300)
T COG2813 207 VE----------------NTEVWASNLYEPVEG---KFDLIISNPPFHAGKAV---V----------------------- 241 (300)
T ss_pred CC----------------ccEEEEecccccccc---cccEEEeCCCccCCcch---h-----------------------
Confidence 73 447888898887543 89999999999953221 1
Q ss_pred cccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHH
Q 043334 159 FVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQG 197 (903)
Q Consensus 159 ~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~ 197 (903)
...-.++++++.++|++||.+.+.........
T Consensus 242 -------~~~~~~~i~~A~~~L~~gGeL~iVan~~l~y~ 273 (300)
T COG2813 242 -------HSLAQEIIAAAARHLKPGGELWIVANRHLPYE 273 (300)
T ss_pred -------HHHHHHHHHHHHHhhccCCEEEEEEcCCCChH
Confidence 11233889999999999999999887554443
No 221
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.60 E-value=6.3e-14 Score=160.43 Aligned_cols=183 Identities=11% Similarity=0.119 Sum_probs=135.3
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH----HHHHHHcCCEEEEecC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY----VSAARFLKANIVNIPT 725 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~ 725 (903)
..+..+.+++.+++.+|.+ . .+++++|.. ++..++. ++++||+|++++|.|+.. ...++..|++++.+++
T Consensus 52 ~~p~~~~le~~lA~l~g~~-~---~v~~~sG~~-ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 52 GNPTREALEDIIAELEGGT-K---GFAFASGMA-AISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred CChhHHHHHHHHHHHhCCC-C---eEEECCHHH-HHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 3445677888888888865 2 588888854 6776665 788999999999988743 3455678999999986
Q ss_pred CCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchh
Q 043334 726 ESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLE 805 (903)
Q Consensus 726 ~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~ 805 (903)
. |++.+++.+++++ ++|++++|+ ||||.+.+ +++|.++|+++|+++|+|++|...... .
T Consensus 126 ~-------d~~~l~~~l~~~t-klV~l~~p~-NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~--~------- 184 (390)
T PRK08064 126 T-------NLEEVAQNIKPNT-KLFYVETPS-NPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ--K------- 184 (390)
T ss_pred C-------CHHHHHHhcCCCc-eEEEEECCC-CCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc--C-------
Confidence 3 6889999998777 599999998 99999987 778888899999999999999532111 0
Q ss_pred hhhhhhccCCCCCCceEEEccCchhccc-ccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHH
Q 043334 806 GCLSKLYSSTNSSFNVSLLGGLSLKMLT-GALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYA 868 (903)
Q Consensus 806 ~~~~~l~~~~~~~~~vI~l~S~SK~~g~-~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~a 868 (903)
+ +. . +..+++.|+||.++. +|...|++++.++++++.+..+....+.+...+.+
T Consensus 185 ~-~~----~----g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a 239 (390)
T PRK08064 185 P-LD----L----GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDC 239 (390)
T ss_pred c-hh----h----CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHH
Confidence 1 11 1 246899999999863 44677888887655888888766544443333333
No 222
>PRK05968 hypothetical protein; Provisional
Probab=99.59 E-value=7.7e-14 Score=159.67 Aligned_cols=191 Identities=10% Similarity=0.068 Sum_probs=138.6
Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH----HHHHHHcCCEEE
Q 043334 646 MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY----VSAARFLKANIV 721 (903)
Q Consensus 646 ~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv 721 (903)
+..+..+-.+.+++.++++.|.+. .+++++|+ .++..++.++++|||+|+++.+.|+.. ...++..|++++
T Consensus 57 Y~r~~~p~~~~le~~lA~l~g~~~----av~~~sG~-~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~ 131 (389)
T PRK05968 57 YSRGDNPTVRAFEEMLAKLEGAED----ARGFASGM-AAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVD 131 (389)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCc----EEEECCHH-HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEE
Confidence 344444456778888888888753 46666665 688888888999999999999999863 355677899999
Q ss_pred EecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCC
Q 043334 722 NIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGG 801 (903)
Q Consensus 722 ~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~ 801 (903)
.++.. |++.+++.+ +++ ++|++++|+ ||++ +..++++|.++|+++|++||+|++|+...+.. +
T Consensus 132 ~vd~~-------d~~~l~~~i-~~t-klV~ie~pt-~~~~---~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-p--- 194 (389)
T PRK05968 132 YVDGR-------DEEAVAKAL-PGA-KLLYLESPT-SWVF---ELQDVAALAALAKRHGVVTMIDNSWASPVFQR-P--- 194 (389)
T ss_pred EeCCC-------CHHHHHHhc-ccC-CEEEEECCC-CCCC---cHHHHHHHHHHHHHcCCEEEEECCCcchhccC-c---
Confidence 98752 688898887 445 589998776 6654 55789999999999999999999996433221 1
Q ss_pred CchhhhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhCCC---CCCCcHHHHHHHHHHH
Q 043334 802 WDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSFPG---LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 802 ~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~~~---~~~~s~~~Q~aa~~~L 873 (903)
+. . +..+++.|+||.++.+| .+.|+++++++ ++++++.... ....+...++.+...|
T Consensus 195 ------~~----~----g~Divv~S~tK~l~g~~~~~gG~i~~~~~-~~~~l~~~~~~~~g~~~~~~~A~~~l~~L 255 (389)
T PRK05968 195 ------IT----L----GVDLVIHSASKYLGGHSDTVAGVVAGSKE-HIARINAEAYPYLGAKLSPFEAWLLLRGL 255 (389)
T ss_pred ------hh----c----CCcEEEeeccccccCCCCeEEEEEEECHH-HHHHHHHHHHHhCCCCCChHHHHHHHccc
Confidence 11 0 23578899999998765 58899998776 8887775322 2345555555555555
No 223
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.59 E-value=1.3e-13 Score=158.37 Aligned_cols=240 Identities=8% Similarity=0.008 Sum_probs=157.1
Q ss_pred CCCCCeEEccCCCC--CCC-CcHHHHHHHHHHHHccCCC--CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQS--FLP-IPSLVKAAIFESFARQNMS--ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~-~p~~v~~al~~al~~y~~~--~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..|.- .++ ..|.+.+++.+.+.++... .-..+....+++.+.+..+. + .++++++++++..
T Consensus 37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~----~-~~~~~~SGseA~e 111 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK----D-MVLPMNTGAEAVE 111 (396)
T ss_pred CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCC----C-eEEEcCChHHHHH
Confidence 46778899865532 233 5788899998888764322 11234456677777775542 2 6888888888888
Q ss_pred HHHHHhcc---------CC-CeEEEcCCCcHH-HHHHHHHcCCEEEE---ecCCCC---CCcccCHHHHHHHhhcCCCcE
Q 043334 687 KLVLCCIL---------EG-GTLCFPAGSNGN-YVSAARFLKANIVN---IPTESE---VGFKMTEKTLVTILETVKKPW 749 (903)
Q Consensus 687 ~ll~~l~~---------pG-D~Vlv~~P~y~~-~~~~~~~~G~~vv~---v~~~~~---~~f~ld~~~L~~~l~~~~~~~ 749 (903)
.++..... +| +.|+..+-+|-+ +.......+..... -+.... -.| .|++.+++.+++++ .+
T Consensus 112 ~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~i~~~~-~~ 189 (396)
T PRK04073 112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-GDLEALKAAITPNT-AA 189 (396)
T ss_pred HHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-CCHHHHHHhcccCe-EE
Confidence 77766531 34 567777665544 33333333311100 000000 011 27899999887665 46
Q ss_pred EEEECCCCCCcccCCCHH-HHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc
Q 043334 750 VYISGPTINPTGLLYSNK-EIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS 828 (903)
Q Consensus 750 vil~~P~~NPTG~v~s~e-el~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S 828 (903)
+++++|+ ||||.+++.+ .+++|.++|+++|+++|+||+|.++.+.+... ........+ -+.+||
T Consensus 190 viiep~~-~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~-------~~~~~~~~p-------di~~~s 254 (396)
T PRK04073 190 FLVEPIQ-GEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLF-------ACDWDNVTP-------DMYILG 254 (396)
T ss_pred EEEcCcc-CCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHH-------HhhhcCCCC-------CEEEec
Confidence 6666664 9999998764 69999999999999999999998765544321 011111111 234589
Q ss_pred hhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHh
Q 043334 829 LKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 829 K~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
|.+|++|+|+||++++++ +++.+.... .+.+.+.+.|.++.++|+
T Consensus 255 K~lg~gg~~ig~~~~~~~-i~~~~~~~~~~~t~~~~~~~~aaa~aaL~ 301 (396)
T PRK04073 255 KALGGGVFPISCVAANRD-ILGVFTPGSHGSTFGGNPLACAVSIAALE 301 (396)
T ss_pred ccccCCCCcceEEEEcHH-HHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999998999999999987 888886533 366788999999999995
No 224
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.58 E-value=7.4e-14 Score=160.55 Aligned_cols=158 Identities=13% Similarity=0.122 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~~ 727 (903)
+..+++++.+++..|.. ..++++++++|+.+++.+++++||+|+++.++|...... ++..|+++..++.
T Consensus 61 Ptv~~lE~~la~leg~~-----~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~-- 133 (432)
T PRK06702 61 PTLAAFEQKLAELEGGV-----GAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP-- 133 (432)
T ss_pred cHHHHHHHHHHHHhCCC-----cEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC--
Confidence 34777888888887764 367788889999988988999999999999999876665 6788999999864
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
.+|++.++++++++++ +|++.+|+ ||||.+.+ +++|.++|+++|+++|+|++|. .+ +
T Consensus 134 ----~~d~~~l~~~I~~~Tk-~I~~e~pg-nP~~~v~D---i~~I~~iA~~~gi~livD~T~~------tP--------~ 190 (432)
T PRK06702 134 ----NLTADEIVALANDKTK-LVYAESLG-NPAMNVLN---FKEFSDAAKELEVPFIVDNTLA------TP--------Y 190 (432)
T ss_pred ----CCCHHHHHHhCCcCCe-EEEEEcCC-CccccccC---HHHHHHHHHHcCCEEEEECCCC------ch--------h
Confidence 3689999999999884 99999998 99999998 8999999999999999999983 11 1
Q ss_pred hhh-hccCCCCCCceEEEccCch-----hccccccee-----eEEEeC
Q 043334 808 LSK-LYSSTNSSFNVSLLGGLSL-----KMLTGALKF-----GFLVLN 844 (903)
Q Consensus 808 ~~~-l~~~~~~~~~vI~l~S~SK-----~~g~~GlRi-----G~lv~~ 844 (903)
+.. +.. +-.|+++|+|| +.+++|.++ +|..++
T Consensus 191 ~~~pl~~-----GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~ 233 (432)
T PRK06702 191 LCQAFEH-----GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGK 233 (432)
T ss_pred hCChhhc-----CCCEEEEccccccCCCcceeceEEEeCCCccccccc
Confidence 111 111 24699999999 777888887 676654
No 225
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.58 E-value=2e-13 Score=157.07 Aligned_cols=234 Identities=9% Similarity=0.035 Sum_probs=158.1
Q ss_pred CCCCCeEEccCCCCCCC---CcHHHHHHHHHHHHccCCCC--CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLP---IPSLVKAAIFESFARQNMSE--SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~---~p~~v~~al~~al~~y~~~~--G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..|..... ..+.+.+++.+.+..+.... -..+....+++.+++..|. + .+++++++++++.
T Consensus 38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~---~~~~~~SGs~A~e 112 (401)
T PRK00854 38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGS--H---KVLPMNSGAEAVE 112 (401)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--C---EEEEeCCcHHHHH
Confidence 35677888866543333 37788999988887654321 1234566788888877653 2 6888888888888
Q ss_pred HHHHHhcc---------CC-CeEEEcCCCcHHHHHHHHHcCC-------------EEEEecCCCCCCcccCHHHHHHHhh
Q 043334 687 KLVLCCIL---------EG-GTLCFPAGSNGNYVSAARFLKA-------------NIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 687 ~ll~~l~~---------pG-D~Vlv~~P~y~~~~~~~~~~G~-------------~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
.++..+.. +| +.|++..-+|-+....+...+. .+..++. .|++.+++.+.
T Consensus 113 ~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~ 185 (401)
T PRK00854 113 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALEAAIT 185 (401)
T ss_pred HHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhC
Confidence 88877742 23 5677766666443322222221 1222221 47899999998
Q ss_pred cCCCcEEEEECCCCCCcccCCCH-HHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 744 TVKKPWVYISGPTINPTGLLYSN-KEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v~s~-eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
+++ ++|++++|+ ||||.+++. +.+++|.++|++||+++|+||+|.++.+.+... . .....-.+ |.++
T Consensus 186 ~~~-~aii~e~~~-~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~---~----~~~~g~~~---D~~~ 253 (401)
T PRK00854 186 PNT-VAFLVEPIQ-GEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL---A----EEHEGIEA---DVTL 253 (401)
T ss_pred CCe-EEEEEcccc-CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh---H----HhhcCCCC---CEEE
Confidence 766 599999997 999999984 569999999999999999999998765544321 0 01111111 2232
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
+||.++..+||+||++++++ +++.+..... ..+.+.+.|.++.+.|+
T Consensus 254 ----~~K~l~gg~~~ig~v~~~~~-~~~~l~~~~~~~t~~~~~~~~aa~~a~L~ 302 (401)
T PRK00854 254 ----IGKALSGGFYPVSAVLSNSE-VLGVLKPGQHGSTFGGNPLACAVARAALK 302 (401)
T ss_pred ----ecccccCCccCeEEEEEcHH-HHhcccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 36999754589999999987 8888764432 56678899999999984
No 226
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.58 E-value=1.4e-13 Score=156.96 Aligned_cols=165 Identities=8% Similarity=0.033 Sum_probs=123.9
Q ss_pred HHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCCCCC
Q 043334 655 PSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTESEVG 730 (903)
Q Consensus 655 ~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~~~~ 730 (903)
.++++.+++..|. . ++++++|+++++..++.+++++||+|++++|.|+++...+ +..|+++..++..
T Consensus 64 ~~Le~~iA~le~~--~---~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~---- 134 (394)
T PRK09028 64 FAFQAAIVELEGG--A---GTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM---- 134 (394)
T ss_pred HHHHHHHHHHhCC--C---cEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC----
Confidence 3444444444443 2 5889999999999999999999999999999998877543 5578888877642
Q ss_pred cccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhh
Q 043334 731 FKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSK 810 (903)
Q Consensus 731 f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~ 810 (903)
+.+.+++++++++ ++|++++|+ ||||.+ .++++|+++|+++|+++|+|++|+.... -.+ +
T Consensus 135 ---~~e~l~~~l~~~T-klV~lesps-NPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~p~~-~~P---------l-- 194 (394)
T PRK09028 135 ---IGEGIRELIRPNT-KVLFLESPG-SITMEV---QDVPTLSRIAHEHDIVVMLDNTWASPIN-SRP---------F-- 194 (394)
T ss_pred ---CHHHHHHhcCcCc-eEEEEECCC-CCCCcH---HHHHHHHHHHHHcCCEEEEECCcccccc-CCc---------c--
Confidence 3577888888877 599999998 999887 4599999999999999999999963211 011 1
Q ss_pred hccCCCCCCceEEEccCchhcccc-cceeeEEEeCcHHHHHHHHhC
Q 043334 811 LYSSTNSSFNVSLLGGLSLKMLTG-ALKFGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 811 l~~~~~~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~~li~~l~~~ 855 (903)
.. +-.++++|.+|.++.+ +...|+++.+++ +.+.+...
T Consensus 195 --~~----GaDivv~S~tK~l~Gh~d~~~G~~~~~~~-~~~~l~~~ 233 (394)
T PRK09028 195 --EM----GVDISIQAATKYIVGHSDVMLGTATANEK-HWDQLREH 233 (394)
T ss_pred --cc----CceEEEEeCCeEecCCCCEEEEEEECCHH-HHHHHHHH
Confidence 11 3579999999999544 566677766554 66666543
No 227
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=99.57 E-value=2.7e-14 Score=133.57 Aligned_cols=111 Identities=26% Similarity=0.417 Sum_probs=86.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++..++.+|+|+|+|++|++.|++++...+. .++++++++|+ ...
T Consensus 1 p~~~vLDlGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~i~~~~~d~-~~~ 64 (112)
T PF12847_consen 1 PGGRVLDLGCGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGL---------------SDRITFVQGDA-EFD 64 (112)
T ss_dssp TTCEEEEETTTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTT---------------TTTEEEEESCC-HGG
T ss_pred CCCEEEEEcCcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC---------------CCCeEEEECcc-ccC
Confidence 46899999999999999999988899999999999999999999965554 37999999999 333
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.....+||+|+++- +... .... .+...++++.+.+.|+|||++++.
T Consensus 65 ~~~~~~~D~v~~~~-~~~~---~~~~------------------------------~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 65 PDFLEPFDLVICSG-FTLH---FLLP------------------------------LDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp TTTSSCEEEEEECS-GSGG---GCCH------------------------------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCCCCEEEECC-Cccc---cccc------------------------------hhHHHHHHHHHHHhcCCCcEEEEE
Confidence 33334799999753 2100 0000 022347899999999999999986
Q ss_pred e
Q 043334 190 M 190 (903)
Q Consensus 190 ~ 190 (903)
.
T Consensus 111 ~ 111 (112)
T PF12847_consen 111 T 111 (112)
T ss_dssp E
T ss_pred E
Confidence 4
No 228
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=4.8e-14 Score=162.99 Aligned_cols=159 Identities=11% Similarity=0.101 Sum_probs=126.6
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH----HHHHHHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY----VSAARFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~~ 726 (903)
.+..+.+++.+++..|.+ ..++++|+++++..++..++++||+|+++.+.|+.. ...++..|++++.+++
T Consensus 63 ~p~~~~Le~~lA~leg~~-----~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~- 136 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGI-----GALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP- 136 (431)
T ss_pred CchHHHHHHHHHHHhCCC-----cEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-
Confidence 344677888888888743 466777778888888888899999999999988653 3456778999999986
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
.|++++++++++++ ++|++++|+ ||||.+++ +++|.++|+++|++||+|++|+. +.. ..+
T Consensus 137 ------~d~e~l~~ai~~~t-klV~l~sp~-NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~-----~~p 196 (431)
T PRK08248 137 ------SDPENFEAAITDKT-KALFAETIG-NPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYL-----LRP 196 (431)
T ss_pred ------CCHHHHHHhcCCCC-eEEEEECCC-CCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----ccc-----CCh
Confidence 26899999998776 599999998 99999998 67889999999999999999851 111 001
Q ss_pred hhhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+ .. +..+++.|++|.+|.+|.++|++++.
T Consensus 197 -l----~~----gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 197 -I----EH----GADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred -h----Hc----CCCEEEEcCccccCCCCCceEEEEEe
Confidence 1 11 36789999999999999999988874
No 229
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.57 E-value=2.1e-13 Score=155.43 Aligned_cols=170 Identities=12% Similarity=0.101 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHH----HHHHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYV----SAARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~----~~~~~~G~~vv~v~~~~ 727 (903)
+..+.+++.+++..|.+. .+++++|+. ++..++ .+++|||+|++++|.|+... ..++..|++++.++.
T Consensus 50 p~~~~Le~~la~l~g~~~----al~~~SG~~-Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~-- 121 (380)
T PRK06176 50 PTRFALEELIADLEGGVK----GFAFASGLA-GIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT-- 121 (380)
T ss_pred hhHHHHHHHHHHHhCCCC----EEEECCHHH-HHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC--
Confidence 447778888888888653 488888865 666655 57799999999999998654 345668999888865
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
.|++.+++++++++ ++|++++|+ ||||.+++ +++|.++|+++|++||+|++|+...+. .+
T Consensus 122 -----~d~e~l~~ai~~~t-~lV~lesP~-Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~p--------- 181 (380)
T PRK06176 122 -----SDLSQIKKAIKPNT-KALYLETPS-NPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-NP--------- 181 (380)
T ss_pred -----CCHHHHHHhcCcCc-eEEEEECCC-CCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-Cc---------
Confidence 37899999998776 599999998 99999987 778899999999999999999743222 11
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccc-eeeEEEeCcHHHHHHHHhCCC
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGAL-KFGFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl-RiG~lv~~~~~li~~l~~~~~ 857 (903)
+. . +..+++.|++|.++.+|- -.|++++.++++.+.+...+.
T Consensus 182 ~~----~----gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~ 224 (380)
T PRK06176 182 LL----L----GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQN 224 (380)
T ss_pred cc----c----CCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHH
Confidence 11 1 246899999999986664 457788766657777665443
No 230
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.57 E-value=2.9e-13 Score=142.17 Aligned_cols=280 Identities=11% Similarity=0.085 Sum_probs=187.0
Q ss_pred CCCCCeEEccCCCCCCC-CcHHHHHHHHHH---HH-------ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcE--Eec
Q 043334 612 TPNSGLIHMDVDQSFLP-IPSLVKAAIFES---FA-------RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEF--IYA 678 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~-~p~~v~~al~~a---l~-------~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I--~vt 678 (903)
...+..++|++|.--.. ..|+++..+.++ +. +|-+..|.+.++++..+.+-...-.... ++++ +-+
T Consensus 27 d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~k-E~Rv~~vQs 105 (410)
T KOG1412|consen 27 DLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIK-EDRVFGVQS 105 (410)
T ss_pred cCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhh-hccccceee
Confidence 56677889988853211 122333222222 11 2556789999998888776322111112 1122 112
Q ss_pred CchHHHHHHH---HHHhccCCCeEEEcCCCcHHHHHHHHHcC-CEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEEC
Q 043334 679 DCSQSLFNKL---VLCCILEGGTLCFPAGSNGNYVSAARFLK-ANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISG 754 (903)
Q Consensus 679 ~Gs~~al~~l---l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G-~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~ 754 (903)
-++++++... +..++. ...|.+..|+|.++..+++..| .++..++..+.+.-.+|.+.+...+...+...+++.+
T Consensus 106 lsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLh 184 (410)
T KOG1412|consen 106 LSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILH 184 (410)
T ss_pred ccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeee
Confidence 2334444433 333343 4679999999999999999999 5666777655555668999998888877666788888
Q ss_pred CC-CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccc
Q 043334 755 PT-INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLT 833 (903)
Q Consensus 755 P~-~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~ 833 (903)
.+ |||||.-.+.|+|.+|++..++.+.+.+-|-+|.++.-+....+.|.++-+... + ...+++.||+|.||+
T Consensus 185 aCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~--g-----~e~fv~QSFaKNfGl 257 (410)
T KOG1412|consen 185 ACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQ--G-----FELFVCQSFAKNFGL 257 (410)
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhc--C-----CeEEEEhhhhhhccc
Confidence 88 999999999999999999999999999999999988766555455665544442 1 358999999999999
Q ss_pred ccceeeE--EEeCcHHHHHHHHh----CC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 834 GALKFGF--LVLNHPQLVDAFSS----FP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 834 ~GlRiG~--lv~~~~~li~~l~~----~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
.|-|+|- ++.++...+..+.+ +. ..+.|+.....++.+.|. +....+++.+-+..+..++++.|..|
T Consensus 258 YneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~-tP~lre~W~~sik~MssRI~~MR~aL 332 (410)
T KOG1412|consen 258 YNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLS-TPELREQWIQSIKTMSSRIKKMRTAL 332 (410)
T ss_pred ccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 34555545554443 22 277888899999999995 22222334444444555555555444
No 231
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.56 E-value=4.1e-13 Score=153.15 Aligned_cols=190 Identities=15% Similarity=0.089 Sum_probs=140.6
Q ss_pred CCcHHHHHHHHHHHHcc-CCCCCc-------hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc---cCC
Q 043334 628 PIPSLVKAAIFESFARQ-NMSESE-------IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI---LEG 696 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y-~~~~G~-------~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~---~pG 696 (903)
++|+.+.+++.+.+..+ ...... .+..+.+++.+++.+|.+.+ +|++|+|+++++..++.+++ .+|
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---~i~~t~~~t~a~~~al~~~~~~~~~~ 86 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD---EIIFTSGGTESDNTAIKSALAAQPEK 86 (379)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC---eEEEeCcHHHHHHHHHHHHHHhcCCC
Confidence 46778888888776532 111111 23345677888888897643 89999999999998887764 457
Q ss_pred CeEEEcCCCcHHHHHHH---HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 697 GTLCFPAGSNGNYVSAA---RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 697 D~Vlv~~P~y~~~~~~~---~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
|.|+++..+|+.+...+ +..|++++.+|++. ++.+|++++++.+++++ +++++++++ ||||.+++ +++|.
T Consensus 87 ~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~-~lv~i~~~~-n~tG~~~~---~~~I~ 159 (379)
T TIGR03402 87 RHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDT-ALVSVMWAN-NETGTIFP---IEEIG 159 (379)
T ss_pred CeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCc-EEEEEEccc-CCeeeccc---HHHHH
Confidence 89999998888765443 44699999999864 45689999999998776 589999998 99999999 56788
Q ss_pred HHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 774 TVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
++|+++|+++++|++++. +..+ .+ +... +..+++.|..|.+|.+| +|++...+.
T Consensus 160 ~l~~~~g~~vivD~~~~~---g~~~---~~-------~~~~----~~D~~~~s~~K~~gp~G--~g~l~v~~~ 213 (379)
T TIGR03402 160 EIAKERGALFHTDAVQAV---GKIP---ID-------LKEM----NIDMLSLSGHKLHGPKG--VGALYIRKG 213 (379)
T ss_pred HHHHHcCCEEEEECcccc---cccc---cC-------cccC----CCCEEEEcHHHcCCCCc--eEEEEECCC
Confidence 999999999999999852 1111 11 1111 24577888889777666 788887754
No 232
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.56 E-value=3.2e-13 Score=155.20 Aligned_cols=227 Identities=10% Similarity=0.031 Sum_probs=158.2
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchH-HHHHHHHHHhcc---CCCeEEEcCCCcHHHHHHHHHcCCEEEEecC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ-SLFNKLVLCCIL---EGGTLCFPAGSNGNYVSAARFLKANIVNIPT 725 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~-~al~~ll~~l~~---pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~ 725 (903)
...+...+.+.+.+++|++.. . ..++++|++ .++.+++.++-. +||.|+++.-+|.....++...|++++.+++
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~-~-~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~ 180 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSI-K-SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-C-EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeee
Confidence 456778889999998998733 1 366666666 577766666542 5899999999999999999999999999996
Q ss_pred -CCCCCcccCHHHHHHHhhcCC--CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCC
Q 043334 726 -ESEVGFKMTEKTLVTILETVK--KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGW 802 (903)
Q Consensus 726 -~~~~~f~ld~~~L~~~l~~~~--~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~ 802 (903)
.++++|.+|++++++++++++ ..++++++|+ ||...+.+++++|.++|++||+++|+|++|+... ..
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~---t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~---~~---- 250 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS---CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQS---NK---- 250 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC---cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcC---hh----
Confidence 234679999999999998632 2356666563 5666667889999999999999999999997311 00
Q ss_pred chhhhhhhhccCCCCCC-ceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccch
Q 043334 803 DLEGCLSKLYSSTNSSF-NVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKAR 881 (903)
Q Consensus 803 s~~~~~~~l~~~~~~~~-~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~ 881 (903)
...... .... .+ -.+++.|++|.+.+||+ .|.++++++++++.+.........++++|.+...++. .+
T Consensus 251 -~~~~~~--~g~~--~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~--~G--- 319 (444)
T TIGR03531 251 -YMELIN--KAIK--VGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLS--LG--- 319 (444)
T ss_pred -hhhhhh--cccc--ccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHH--hC---
Confidence 000000 0110 01 26778899999998888 3344476666888888754433355678888888884 33
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 043334 882 DLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 882 ~~~~~l~~~r~~y~~Rr~~l 901 (903)
.+.++++.+.+.++++.+
T Consensus 320 --~~g~~~li~~~~~~a~~l 337 (444)
T TIGR03531 320 --SKGYLELLKERKEMYKYL 337 (444)
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 134445555555555444
No 233
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.56 E-value=2.6e-13 Score=154.39 Aligned_cols=167 Identities=11% Similarity=0.087 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~~ 727 (903)
+..+.+++.+++..|.+ ++++++|+++++..++.+++++||+|++++|.|+..... .+..|+++..++..
T Consensus 50 Pt~~~lE~~lA~l~g~~-----~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~- 123 (377)
T TIGR01324 50 LTHFALQDAMCELEGGA-----GCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL- 123 (377)
T ss_pred ccHHHHHHHHHHHhCCC-----cEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence 34566777777777742 588899999999999999999999999999999887643 35678888877542
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
+.+.+++++++++ ++|++++|+ ||||.+. ++++|+++|+++|+++|+|++|+.-.. ..+
T Consensus 124 ------~~e~l~~~i~~~t-klV~lesp~-Np~g~~~---dl~~I~~la~~~g~~livD~t~a~g~~-~~p--------- 182 (377)
T TIGR01324 124 ------IGEDIATLIQPNT-KVLFLEAPS-SITFEIQ---DIPAIAKAARNPGIVIMIDNTWAAGLL-FKP--------- 182 (377)
T ss_pred ------CHHHHHHhcCCCc-eEEEEECCC-CCCCcHH---HHHHHHHHHHHcCCEEEEECCCccccc-cCc---------
Confidence 2378888888877 599999998 9998774 599999999999999999999963221 111
Q ss_pred hhhhccCCCCCCceEEEccCchhcccc-cceeeEEEeCcHHHHHHHHh
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTG-ALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~~li~~l~~ 854 (903)
+ .. +..++++|++|.++.+ +...|+++++++ .++.+..
T Consensus 183 l----~~----gaDivv~S~tK~l~G~~d~~gG~v~~~~~-~~~~l~~ 221 (377)
T TIGR01324 183 L----EH----GVDISIQAGTKYLVGHSDIMIGTVVANAR-TWDQLRE 221 (377)
T ss_pred c----cc----CceEEEecCceeccCCCCceEEEEEeCHH-HHHHHHH
Confidence 1 11 3578999999999744 467899988876 6666654
No 234
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=99.56 E-value=6.5e-14 Score=143.51 Aligned_cols=144 Identities=17% Similarity=0.204 Sum_probs=114.1
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhh
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEK 91 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~ 91 (903)
.|...|++.+..... ..++.+|||+|||+|..++.++...++.+|+|+|+|++|++.|++|++.+++
T Consensus 28 ~~~~~~~d~l~l~~~-l~~g~~VLDiGcGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l------------ 94 (187)
T PRK00107 28 LWERHILDSLAIAPY-LPGGERVLDVGSGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGL------------ 94 (187)
T ss_pred HHHHHHHHHHHHHhh-cCCCCeEEEEcCCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCC------------
Confidence 577777776544322 3348899999999999999999888889999999999999999999998887
Q ss_pred cccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHH
Q 043334 92 KTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIAR 171 (903)
Q Consensus 92 ~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~ 171 (903)
++++++++|+.+... .++||+|++|- . . .+..
T Consensus 95 ----~~i~~~~~d~~~~~~--~~~fDlV~~~~----------~----~----------------------------~~~~ 126 (187)
T PRK00107 95 ----KNVTVVHGRAEEFGQ--EEKFDVVTSRA----------V----A----------------------------SLSD 126 (187)
T ss_pred ----CCEEEEeccHhhCCC--CCCccEEEEcc----------c----c----------------------------CHHH
Confidence 359999999988754 34899999751 0 0 0236
Q ss_pred HHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 172 AVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 172 ~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
+++++++.|||||++++..+.... ..+..+.+..|+.+...+...
T Consensus 127 ~l~~~~~~LkpGG~lv~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~ 171 (187)
T PRK00107 127 LVELCLPLLKPGGRFLALKGRDPE-EEIAELPKALGGKVEEVIELT 171 (187)
T ss_pred HHHHHHHhcCCCeEEEEEeCCChH-HHHHHHHHhcCceEeeeEEEe
Confidence 799999999999999999877544 444678888899887775444
No 235
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.56 E-value=1.3e-12 Score=150.32 Aligned_cols=214 Identities=13% Similarity=0.066 Sum_probs=159.8
Q ss_pred CCeEEccCCC-CCCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 615 SGLIHMDVDQ-SFLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 615 ~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
.++++|+.++ -.+...+.++++..+++.+|+. ..|...+.+.+++.+++++|.+.. +++++|-.+.+.
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~a----ll~sSGy~AN~~ 177 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDC----LVCPTGFAANMA 177 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcE----EEECChHHHHHH
Confidence 4678877554 3355788899999999998864 356777888899999999887644 888888887776
Q ss_pred HHHHHh--------------ccCCCeEEEcCCCcHHHHHHHHHc----CCEEEEecCCCCCCcccCHHHHHHHhhcC--C
Q 043334 687 KLVLCC--------------ILEGGTLCFPAGSNGNYVSAARFL----KANIVNIPTESEVGFKMTEKTLVTILETV--K 746 (903)
Q Consensus 687 ~ll~~l--------------~~pGD~Vlv~~P~y~~~~~~~~~~----G~~vv~v~~~~~~~f~ld~~~L~~~l~~~--~ 746 (903)
. +.++ .+++|.|+...-.+......++.. +++++.++. -|++.|++.++.. .
T Consensus 178 ~-i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~~~ 249 (476)
T PLN02955 178 A-MVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSLLSSCKMK 249 (476)
T ss_pred H-HHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHHHHhCCCC
Confidence 5 4444 245678888888899988888877 577877765 2688888887542 2
Q ss_pred CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEcc
Q 043334 747 KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGG 826 (903)
Q Consensus 747 ~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S 826 (903)
+++|++..-. +++|.+.+ +++|.++|++||+++|+||+|+...++.... .....++-.+ +..|+++|
T Consensus 250 ~~~Vv~EgV~-SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~------G~~e~~g~~~---di~ii~~T 316 (476)
T PLN02955 250 RKVVVTDSLF-SMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGG------GVAEEFNCEA---DVDLCVGT 316 (476)
T ss_pred ceEEEEeCCC-CCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCC------cHHHHhCCCC---CCcEEEEe
Confidence 2355555445 99999999 8888888899999999999998777765432 1222222222 57899999
Q ss_pred CchhcccccceeeEEEeCcHHHHHHHHhCCC
Q 043334 827 LSLKMLTGALKFGFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 827 ~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~ 857 (903)
|||.+|+.| ||++++++ +++.+.....
T Consensus 317 LsKA~G~~G---Gfi~gs~~-~~~~l~~~~~ 343 (476)
T PLN02955 317 LSKAAGCHG---GFIACSKK-WKQLIQSRGR 343 (476)
T ss_pred CccchhccC---ceeecHHH-HHHHHHHhCC
Confidence 999997776 99999887 8888886554
No 236
>PLN02509 cystathionine beta-lyase
Probab=99.55 E-value=3.2e-13 Score=156.73 Aligned_cols=169 Identities=11% Similarity=0.095 Sum_probs=126.9
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEec
Q 043334 649 SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIP 724 (903)
Q Consensus 649 G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~ 724 (903)
|.+ .++++++++++..|.+ ..++++|+++++..++ .++++||+|+++.|.|+.+... +...|++++.++
T Consensus 131 gnp-t~~aLE~~lA~leg~e-----~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd 203 (464)
T PLN02509 131 GNP-TRDALESLLAKLDKAD-----RAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN 203 (464)
T ss_pred CCH-HHHHHHHHHHHHhCCC-----EEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeC
Confidence 444 6899999999987632 3455555678887655 5789999999999999998643 457899998886
Q ss_pred CCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCch
Q 043334 725 TESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDL 804 (903)
Q Consensus 725 ~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~ 804 (903)
. .|++++++++++++ ++|++++|+ ||||.+ .++++|+++|+++|+++|+|++|..-.+ +.+
T Consensus 204 ~-------~d~e~l~~ai~~~T-klV~lesPs-NPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-~~p------ 264 (464)
T PLN02509 204 T-------TNLDEVAAAIGPQT-KLVWLESPT-NPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVL-SRP------ 264 (464)
T ss_pred C-------CCHHHHHHhCCcCC-eEEEEECCC-CCCCCH---HHHHHHHHHHHHcCCEEEEECCcccccc-CCh------
Confidence 4 36889999998777 599999998 999987 5699999999999999999999853221 111
Q ss_pred hhhhhhhccCCCCCCceEEEccCchhcccccc-eeeEEEeCcHHHHHHHHh
Q 043334 805 EGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL-KFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 805 ~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl-RiG~lv~~~~~li~~l~~ 854 (903)
.. . +..++++|++|.++.+|- =.|++++.++.+.+.+..
T Consensus 265 ---l~----~----gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~ 304 (464)
T PLN02509 265 ---LE----L----GADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF 304 (464)
T ss_pred ---hh----c----CCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH
Confidence 11 1 246899999999875443 357888766545555443
No 237
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.55 E-value=8.8e-14 Score=160.60 Aligned_cols=158 Identities=10% Similarity=0.086 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHH----cCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARF----LKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~----~G~~vv~v~~~~ 727 (903)
+..+.+++.+++..|.+ ..++++++++++..++.+++++||+|+++.+.|+.....+.. .|+++..++.
T Consensus 58 pt~~~Le~~lA~l~g~~-----~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~-- 130 (425)
T PRK06084 58 PTNDVLEQRVAALEGGV-----GALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH-- 130 (425)
T ss_pred chHHHHHHHHHHHhCCC-----ceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC--
Confidence 34567888888877743 244555666999999999999999999999999865444432 5777766653
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
.|++.+++++++++ ++|++++|+ ||||.+++ +++|.++|+++|++||+|++|+.... .. +
T Consensus 131 -----~d~e~le~ai~~~t-klV~lesp~-NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~-~~--------p- 190 (425)
T PRK06084 131 -----DDIAALEALIDERT-KAVFCESIG-NPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL-CR--------P- 190 (425)
T ss_pred -----CCHHHHHHHhccCC-cEEEEeCCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-CC--------h-
Confidence 37899999998777 599999998 99999998 78899999999999999999963211 11 1
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+. . +..+++.|+||.++.+|.++|.+++.
T Consensus 191 ~~----~----gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 191 FE----H----GADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred hh----c----CCCEEEECchhcccccccceeEEEEe
Confidence 11 1 24699999999999999999987775
No 238
>PLN02651 cysteine desulfurase
Probab=99.55 E-value=6.9e-13 Score=150.58 Aligned_cols=197 Identities=12% Similarity=0.057 Sum_probs=143.2
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHcc-CC-CC-----C--chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 620 MDVDQSFLPIPSLVKAAIFESFARQ-NM-SE-----S--EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 620 Ls~g~p~~~~p~~v~~al~~al~~y-~~-~~-----G--~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
|+.+.+. ++|+.+++++.+.+..+ .. .. + ..+..+.+++.+++.+|.+.+ +|++|+|++++++.++.
T Consensus 3 ld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---~v~~t~~~t~a~~~~l~ 78 (364)
T PLN02651 3 LDMQATT-PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK---EIIFTSGATESNNLAIK 78 (364)
T ss_pred ccCcCCC-CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC---eEEEeCCHHHHHHHHHH
Confidence 3444443 46788999988876442 11 11 1 134456778888888887643 89999999999777665
Q ss_pred Hh----ccCCCeEEEcCCCcHHHHHHH---HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 691 CC----ILEGGTLCFPAGSNGNYVSAA---RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 691 ~l----~~pGD~Vlv~~P~y~~~~~~~---~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
.+ .++||+|+++...|+.+...+ +..|++++.++++. ++.+|++.+++++++++ +++++++++ ||||.+
T Consensus 79 ~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t-~lv~v~~~~-n~tG~~ 154 (364)
T PLN02651 79 GVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS--DGLVDLDELAAAIRPDT-ALVSVMAVN-NEIGVI 154 (364)
T ss_pred HHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCc-EEEEEECCC-CCceec
Confidence 54 478999999998887654433 45799999999863 46689999999998776 589999998 999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
.+ +++|.++|+++|+++++|.+++.- ..+. + +... +..+++.|..|.+|.+| +|+++.
T Consensus 155 ~~---l~~I~~~~~~~g~~~~vD~a~~~g---~~~~---~-------~~~~----~~D~~~~s~hK~~gp~G--~g~l~v 212 (364)
T PLN02651 155 QP---VEEIGELCREKKVLFHTDAAQAVG---KIPV---D-------VDDL----GVDLMSISGHKIYGPKG--VGALYV 212 (364)
T ss_pred cc---HHHHHHHHHHcCCEEEEEcchhhC---Cccc---C-------cccC----CCCEEEechhhhCCCCc--eEEEEE
Confidence 98 788899999999999999998521 1110 0 1111 35788899999544334 899988
Q ss_pred CcH
Q 043334 844 NHP 846 (903)
Q Consensus 844 ~~~ 846 (903)
.++
T Consensus 213 ~~~ 215 (364)
T PLN02651 213 RRR 215 (364)
T ss_pred cCC
Confidence 875
No 239
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.55 E-value=1.4e-13 Score=137.20 Aligned_cols=166 Identities=14% Similarity=0.130 Sum_probs=124.5
Q ss_pred HHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHH-HHHHHcCCEEEEecCCCCCCcccC
Q 043334 656 SIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYV-SAARFLKANIVNIPTESEVGFKMT 734 (903)
Q Consensus 656 ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~-~~~~~~G~~vv~v~~~~~~~f~ld 734 (903)
.+++.+++.++... + ++++++|+++++..++.+++++|++|++++|+|++.. ..++..|++++.++.+..+....+
T Consensus 4 ~~~~~l~~~~~~~~--~-~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 80 (170)
T cd01494 4 ELEEKLARLLQPGN--D-KAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLD 80 (170)
T ss_pred HHHHHHHHHcCCCC--C-cEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchh
Confidence 34455555555332 3 7999999999999999999989999999999999988 888999999999998754333333
Q ss_pred HHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccC
Q 043334 735 EKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSS 814 (903)
Q Consensus 735 ~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~ 814 (903)
.+.+++.....+.+++++++|+ ||+|..++. ++|.++|+++|+++|+|++|..+....... . ...
T Consensus 81 ~~~~~~~~~~~~~~~v~~~~~~-~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~~---------~-~~~- 145 (170)
T cd01494 81 VAILEELKAKPNVALIVITPNT-TSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPGV---------L-IPE- 145 (170)
T ss_pred hhhhhhccccCceEEEEEecCc-CCCCeEcCH---HHHHHHHHHcCCEEEEeccccccccccccc---------c-ccc-
Confidence 3355554433444689999998 999999884 788888999999999999997655543210 0 011
Q ss_pred CCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 815 TNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 815 ~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
.+..+++.|++|.++. .++||+++.
T Consensus 146 ---~~~d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 146 ---GGADVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred ---ccCCEEEEEcccccCC--CceEEEEeC
Confidence 1357889999999974 789999863
No 240
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional
Probab=99.54 E-value=9e-14 Score=155.47 Aligned_cols=137 Identities=17% Similarity=0.218 Sum_probs=104.4
Q ss_pred cccCCcccCcc---hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcc
Q 043334 2 MVIPSIFIPED---WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNA 78 (903)
Q Consensus 2 ~~~p~vfiP~~---w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~g 78 (903)
...||||.+.. -+..+++.+... ...+|||+|||+|.+++.+++..+..+|+++|+|+.|++.|++|+..|+
T Consensus 170 ~~~pgvFs~~~lD~gt~lLl~~l~~~-----~~g~VLDlGCG~G~ls~~la~~~p~~~v~~vDis~~Al~~A~~nl~~n~ 244 (342)
T PRK09489 170 KTLPGVFSRDGLDVGSQLLLSTLTPH-----TKGKVLDVGCGAGVLSAVLARHSPKIRLTLSDVSAAALESSRATLAANG 244 (342)
T ss_pred EeCCCCCCCCCCCHHHHHHHHhcccc-----CCCeEEEeccCcCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 35799999852 233444444422 2358999999999999999999888899999999999999999999887
Q ss_pred cccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccc
Q 043334 79 LDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQG 158 (903)
Q Consensus 79 l~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~ 158 (903)
+ ..+++.+|..+.. .++||+|++||||+.....
T Consensus 245 l-----------------~~~~~~~D~~~~~---~~~fDlIvsNPPFH~g~~~--------------------------- 277 (342)
T PRK09489 245 L-----------------EGEVFASNVFSDI---KGRFDMIISNPPFHDGIQT--------------------------- 277 (342)
T ss_pred C-----------------CCEEEEccccccc---CCCccEEEECCCccCCccc---------------------------
Confidence 6 3567888887643 2389999999999842211
Q ss_pred cccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcH
Q 043334 159 FVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQ 196 (903)
Q Consensus 159 ~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~ 196 (903)
..+...++++++.++|||||.+++..+.....
T Consensus 278 ------~~~~~~~~i~~a~~~LkpgG~L~iVan~~l~y 309 (342)
T PRK09489 278 ------SLDAAQTLIRGAVRHLNSGGELRIVANAFLPY 309 (342)
T ss_pred ------cHHHHHHHHHHHHHhcCcCCEEEEEEeCCCCh
Confidence 11224488999999999999999987654433
No 241
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.54 E-value=4.1e-13 Score=152.86 Aligned_cols=175 Identities=11% Similarity=0.030 Sum_probs=133.5
Q ss_pred cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH----HHHHcCCE
Q 043334 644 QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS----AARFLKAN 719 (903)
Q Consensus 644 y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~----~~~~~G~~ 719 (903)
|.++++..+.++++++.++...|.+ + .+++++ +++++..++.++++|||+|++++|.|+++.. .++..|++
T Consensus 56 y~YsR~gnPt~~~Le~~la~le~~~---~-~v~~sS-G~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~ 130 (395)
T PRK05967 56 YTYGTRGTPTTDALCKAIDALEGSA---G-TILVPS-GLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVE 130 (395)
T ss_pred CccCCCCChHHHHHHHHHHHHhCCC---C-EEEECc-HHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeE
Confidence 5455666778899999998866532 2 466666 5799999999999999999999999999875 45778999
Q ss_pred EEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCC
Q 043334 720 IVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGW 799 (903)
Q Consensus 720 vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~ 799 (903)
+..++.. +.+.+++++++++ ++|++++|+ ||+| ...++++|+++|+++|+++|+|++|+...+.. +
T Consensus 131 v~~vd~~-------~~e~l~~al~~~T-klV~lesPs-NP~l---~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~-p- 196 (395)
T PRK05967 131 VEYYDPE-------IGAGIAKLMRPNT-KVVHTEAPG-SNTF---EMQDIPAIAEAAHRHGAIVMMDNTWATPLYFR-P- 196 (395)
T ss_pred EEEeCCC-------CHHHHHHhcCcCc-eEEEEECCC-CCCC---cHHHHHHHHHHHHHhCCEEEEECCccCceecC-h-
Confidence 9988642 3577999998887 599999998 9976 44679999999999999999999996432211 1
Q ss_pred CCCchhhhhhhhccCCCCCCceEEEccCchhccc-ccceeeEEEeCcHHHHHHHHh
Q 043334 800 GGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLT-GALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 800 s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~-~GlRiG~lv~~~~~li~~l~~ 854 (903)
+. . +..|++.|.+|.++. .+...|+++.++. +.+.+..
T Consensus 197 --------l~----~----GaDivv~S~tKy~~Gh~d~~~G~v~~~~~-~~~~l~~ 235 (395)
T PRK05967 197 --------LD----F----GVDISIHAATKYPSGHSDILLGTVSANEK-CWPQLLE 235 (395)
T ss_pred --------hH----c----CCCEEEEecccccCCCCCeeEEEEEcCHH-HHHHHHH
Confidence 11 1 357999999998753 4566787776654 6665553
No 242
>PHA03411 putative methyltransferase; Provisional
Probab=99.54 E-value=8.4e-14 Score=148.40 Aligned_cols=138 Identities=18% Similarity=0.275 Sum_probs=105.6
Q ss_pred CCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR 110 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~ 110 (903)
+.+|||+|||+|.+++.++.+.++.+|+|+|+|+.|++.+++|. ++++++++|+.++..
T Consensus 65 ~grVLDLGcGsGilsl~la~r~~~~~V~gVDisp~al~~Ar~n~---------------------~~v~~v~~D~~e~~~ 123 (279)
T PHA03411 65 TGKVLDLCAGIGRLSFCMLHRCKPEKIVCVELNPEFARIGKRLL---------------------PEAEWITSDVFEFES 123 (279)
T ss_pred CCeEEEcCCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------------------cCCEEEECchhhhcc
Confidence 46899999999999999888766789999999999999999874 368899999998754
Q ss_pred CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHH--HHHHHHHHhhcccCCcEEEE
Q 043334 111 DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGL--IARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 111 ~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~--~~~~l~~~~~~LkpgG~ll~ 188 (903)
. .+||+|++||||...+..... ... +..+ +..|.+. +.+++..+..+|+|+|.+++
T Consensus 124 ~--~kFDlIIsNPPF~~l~~~d~~--~~~---------------~~~G---G~~g~~~l~~~~~l~~v~~~L~p~G~~~~ 181 (279)
T PHA03411 124 N--EKFDVVISNPPFGKINTTDTK--DVF---------------EYTG---GEFEFKVMTLGQKFADVGYFIVPTGSAGF 181 (279)
T ss_pred c--CCCcEEEEcCCccccCchhhh--hhh---------------hhcc---CccccccccHHHHHhhhHheecCCceEEE
Confidence 3 389999999999964332110 000 1111 4445554 36899999999999999888
Q ss_pred EeCCC------CcHHHHHHHHHHCCCeEE
Q 043334 189 NMGGR------PGQGVCKRLFERRGFRVD 211 (903)
Q Consensus 189 ~~~~~------~~~~~l~~ll~~~gf~~~ 211 (903)
...+. ......++++++.||...
T Consensus 182 ~yss~~~y~~sl~~~~y~~~l~~~g~~~~ 210 (279)
T PHA03411 182 AYSGRPYYDGTMKSNKYLKWSKQTGLVTY 210 (279)
T ss_pred EEeccccccccCCHHHHHHHHHhcCcEec
Confidence 65542 356677899999999864
No 243
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.54 E-value=1.2e-12 Score=150.93 Aligned_cols=239 Identities=8% Similarity=0.024 Sum_probs=161.6
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHcc-CCCCC-chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQ-NMSES-EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y-~~~~G-~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..| ...++ ..+.+.+++.+.+.++ ....+ ..+....+++.+.+..+ .+ .++++++++++..
T Consensus 36 ~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~---~v~~~~sGseA~e 110 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--AD---RVFFCNSGAEANE 110 (406)
T ss_pred CCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CC---eEEEcCCcHHHHH
Confidence 467788998664 33343 4778999998888653 22212 23445677888877543 22 7999999999888
Q ss_pred HHHHHhc--------cCCCeEEEcCCCcHHHHHHHHHcCCEEEE----ecCCC--CCCcccCHHHHHHHhhcCCCcEEEE
Q 043334 687 KLVLCCI--------LEGGTLCFPAGSNGNYVSAARFLKANIVN----IPTES--EVGFKMTEKTLVTILETVKKPWVYI 752 (903)
Q Consensus 687 ~ll~~l~--------~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~----v~~~~--~~~f~ld~~~L~~~l~~~~~~~vil 752 (903)
.++.... .....|+..+.+|-+....+...+..... .++.+ ..-...|++.+++.+.++. ..++
T Consensus 111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--aavi 188 (406)
T PRK12381 111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQT--CAVI 188 (406)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCe--eEEE
Confidence 8877642 13467888888887765444333322110 01111 0011147899999887543 4455
Q ss_pred ECCCCCCcccCC--CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchh
Q 043334 753 SGPTINPTGLLY--SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLK 830 (903)
Q Consensus 753 ~~P~~NPTG~v~--s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~ 830 (903)
..|. ||+|-++ +.+.+++|.++|++||+++|+||+|.++.+.|... . .....-.+ | +.||||.
T Consensus 189 iEPv-~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~---~----~~~~~v~p---D----i~t~sK~ 253 (406)
T PRK12381 189 VEPI-QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY---A----YMHYGVTP---D----VLTTAKA 253 (406)
T ss_pred EeCC-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh---h----hHhhCCCC---C----EEEehhh
Confidence 5798 9999876 68999999999999999999999998776655431 1 11111122 1 3599999
Q ss_pred cccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 831 MLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 831 ~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
++ +|+|+||++++++ +++.+..... +.+.+++.|.++.+.|+
T Consensus 254 l~-gG~~ig~~~~~~~-~~~~~~~~~~~~t~~~~pl~~aaa~a~l~ 297 (406)
T PRK12381 254 LG-GGFPIGAMLTTEK-CASVMTVGTHGTTYGGNPLASAVAGKVLE 297 (406)
T ss_pred hh-CCCceEEEEEcHH-HHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 98 8999999999987 9988875432 56778899999998774
No 244
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.54 E-value=1.7e-12 Score=148.38 Aligned_cols=192 Identities=12% Similarity=0.091 Sum_probs=137.2
Q ss_pred cHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcHH
Q 043334 630 PSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNGN 708 (903)
Q Consensus 630 p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~~ 708 (903)
.+..++++.+.+.......|. ..+.+++.+++++|.+ +.++++|+++++..++.++ +++||+|+++.|+|..
T Consensus 9 ~~~~~~~v~~~~~~~~~~~g~--~~~~le~~la~~~g~~-----~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~ 81 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDFLTQGP--TVPAFEEALAEYVGAK-----YAVAFNSATSALHIACLALGVGPGDRVWTTPITFVA 81 (380)
T ss_pred CHHHHHHHHHHHhcCCccCCh--hHHHHHHHHHHHHCCC-----eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHH
Confidence 344577777777654333332 2344455555555653 2444556788999999988 8899999999999999
Q ss_pred HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh----cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEE
Q 043334 709 YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE----TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVV 784 (903)
Q Consensus 709 ~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~----~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI 784 (903)
+...++..|++++.+++++ +++.+|++++++.++ +++ ++|++ + ||+|...+ +++|.++|+++|++||
T Consensus 82 ~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~t-~~v~~---~-~~~G~~~~---~~~i~~l~~~~~~~lI 152 (380)
T TIGR03588 82 TANCALYCGAKVDFVDIDP-DTGNIDEDALEKKLAAAKGKLP-KAIVP---V-DFAGKSVD---MQAIAALAKKHGLKII 152 (380)
T ss_pred HHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHhhcccCCCc-eEEEE---e-CCCCccCC---HHHHHHHHHHcCCEEE
Confidence 9999999999999999975 357899999999998 555 36654 4 67898876 7888999999999999
Q ss_pred EecCCCCC-ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc--hhcccccceeeEEEeCcHHHHHHHHh
Q 043334 785 IDTAFSGL-EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS--LKMLTGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 785 ~DeaY~~l-~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S--K~~g~~GlRiG~lv~~~~~li~~l~~ 854 (903)
+|++++.. .|++... ... .. ..+.+.||+ |.++. | ..|+++.+++++.+.++.
T Consensus 153 ~D~a~a~g~~~~~~~~---------g~~-~~-----~d~~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~ 208 (380)
T TIGR03588 153 EDASHALGAEYGGKPV---------GNC-RY-----ADATVFSFHPVKIITT-A-EGGAVTTNDEELAERMRL 208 (380)
T ss_pred EECCCcccCccCCEeC---------CCc-cc-----cceEEEecCCCCcccc-c-CceEEEECCHHHHHHHHH
Confidence 99999743 3444331 110 01 245666765 87764 3 578899887768777664
No 245
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.53 E-value=3.5e-13 Score=152.77 Aligned_cols=186 Identities=15% Similarity=0.122 Sum_probs=129.8
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCccc
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKM 733 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~l 733 (903)
...+++.+++..|. + ++++++|+++++.+++ .++++||+|+++.+.|......+.....+- .+.. .|.+
T Consensus 56 ~~~le~~lA~leg~----~-~~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~~~~----~~~~ 124 (364)
T PRK07269 56 RAKLEETLAAIESA----D-YALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEG-RFHF----TYAN 124 (364)
T ss_pred HHHHHHHHHHHhCC----C-eEEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcC-cEEE----EecC
Confidence 45566666666553 2 7999999999999888 467999999999999976555433211000 0110 2446
Q ss_pred CHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc
Q 043334 734 TEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS 813 (903)
Q Consensus 734 d~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~ 813 (903)
|++++++++++++ ++|++++|+ ||||.+.+ +++|+++|+++|+++|+|++|..-.+. .+ +.
T Consensus 125 d~~~l~~~i~~~T-klV~lesP~-NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~-~p---------l~---- 185 (364)
T PRK07269 125 TEEELIAAIEEDT-DIVYIETPT-NPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQ-RP---------IE---- 185 (364)
T ss_pred CHHHHHHhcCcCc-eEEEEECCC-CCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC-Cc---------hh----
Confidence 8999999998877 599999998 99999885 889999999999999999998432211 11 11
Q ss_pred CCCCCCceEEEccCchhcccccc-eeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 814 STNSSFNVSLLGGLSLKMLTGAL-KFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 814 ~~~~~~~vI~l~S~SK~~g~~Gl-RiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
. +-.++++|++|.++.+|- =.||++++++++.+.+..... ....+....+.+...|
T Consensus 186 ~----gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L 244 (364)
T PRK07269 186 L----GADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGL 244 (364)
T ss_pred h----CCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCC
Confidence 1 246999999999975443 357888877668887765443 2344555555454444
No 246
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.53 E-value=8.5e-13 Score=151.65 Aligned_cols=265 Identities=11% Similarity=0.060 Sum_probs=164.1
Q ss_pred CCCCCeEEccCCCCCCC---CcHHHHHHHHHHHHccCCCCC--chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLP---IPSLVKAAIFESFARQNMSES--EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~---~p~~v~~al~~al~~y~~~~G--~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..|.-... .+|.+.+++.+.+..+..... ..+..+.+++.+++..|. + .++++++++++..
T Consensus 28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~---~~~~~~SGs~A~e 102 (400)
T PTZ00125 28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGY--D---KVLPMNSGAEAGE 102 (400)
T ss_pred CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCC--C---EEEEeCCcHHHHH
Confidence 45677899876643332 578899999888766433221 134556777777776553 2 5777777777777
Q ss_pred HHHHHhcc----------CCCeEEEcCCCcHHHHHH-HHHcCCEEEE---ecCCCC--CCcccCHHHHHHHhhcCCCcEE
Q 043334 687 KLVLCCIL----------EGGTLCFPAGSNGNYVSA-ARFLKANIVN---IPTESE--VGFKMTEKTLVTILETVKKPWV 750 (903)
Q Consensus 687 ~ll~~l~~----------pGD~Vlv~~P~y~~~~~~-~~~~G~~vv~---v~~~~~--~~f~ld~~~L~~~l~~~~~~~v 750 (903)
.++..... .++.|++.+-+|...... ....+..... .+.... .-...|++++++.++....++|
T Consensus 103 ~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v 182 (400)
T PTZ00125 103 TALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAF 182 (400)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEE
Confidence 77765531 346787777766554333 2222221110 011000 0001379999999863333466
Q ss_pred EEECCCCCCcccCCC-HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 751 YISGPTINPTGLLYS-NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 751 il~~P~~NPTG~v~s-~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
++..+ |||||.+++ .+.+++|.++|++||+++|+||+|.++.+.+... . .....-.+ + + .++||
T Consensus 183 ~~ep~-~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~---~----~~~~~~~p---d-~---~~~sK 247 (400)
T PTZ00125 183 IVEPI-QGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL---A----HDHEGVKP---D-I---VLLGK 247 (400)
T ss_pred EEcCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh---H----HHhcCCCC---C-E---EEEcc
Confidence 66655 599999996 5569999999999999999999997765555321 0 11111111 1 2 24789
Q ss_pred hcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 830 KMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 830 ~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
.++.+++|+||++++++ +++.+..... +.+.+.+.|.++.+.|+.-.. +.+.++..++.+.++++.+
T Consensus 248 ~l~~g~~~ig~v~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~--~~~~~~~~~~~~~l~~~l~ 316 (400)
T PTZ00125 248 ALSGGLYPISAVLANDD-VMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE--EKLAENAQRLGEVFRDGLK 316 (400)
T ss_pred cccCCCcCcEEEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 99865569999999987 8888765432 566788889888887742111 1234455555555555543
No 247
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.53 E-value=3.4e-12 Score=148.07 Aligned_cols=204 Identities=10% Similarity=0.040 Sum_probs=142.2
Q ss_pred eEEccCCCCCCCC-----cHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 617 LIHMDVDQSFLPI-----PSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 617 ~IdLs~g~p~~~~-----p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
+..|+.|+++.+. +....+++.+.+..+....|. ....+++.+++++|.+ ++++++|+++++..++.+
T Consensus 25 ~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~~~G~--~~~~fe~~lA~~~g~~-----~~v~~~sGt~al~~aL~a 97 (438)
T PRK15407 25 PKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWLTTGR--FNDAFEKKLAEFLGVR-----YALLVNSGSSANLLAFSA 97 (438)
T ss_pred cccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcccCCh--hHHHHHHHHHHHhCCC-----eEEEECCHHHHHHHHHHH
Confidence 3447888887653 223344444555444444453 2445566666666653 577787777887777776
Q ss_pred h---------ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCccc
Q 043334 692 C---------ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGL 762 (903)
Q Consensus 692 l---------~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~ 762 (903)
+ ++|||+|+++.|+|+.+...+...|++++.++++. ++|.+|++.+++.+++++ ++|+++++. |.
T Consensus 98 l~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~t-kaVi~~~~~----G~ 171 (438)
T PRK15407 98 LTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKT-KAIMIAHTL----GN 171 (438)
T ss_pred HhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCC-eEEEEeCCC----CC
Confidence 5 48999999999999999999999999999999875 468899999999998777 478887554 44
Q ss_pred CCCHHHHHHHHHHHHhCCcEEEEecCCCCC-ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc--hhcccccceee
Q 043334 763 LYSNKEIENILTVCAKYGARVVIDTAFSGL-EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS--LKMLTGALKFG 839 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~i~VI~DeaY~~l-~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S--K~~g~~GlRiG 839 (903)
.. ++++|.++|+++|++||+|++++.. .|++... ..+ ..+.+.||. |.+. +| .-|
T Consensus 172 p~---dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~---------G~~--------gd~~~fSf~~~k~~~-~g-eGG 229 (438)
T PRK15407 172 PF---DLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMT---------GTF--------GDIATLSFYPAHHIT-MG-EGG 229 (438)
T ss_pred hh---hHHHHHHHHHHCCCEEEEECccchhhhcCCeee---------ecc--------CceEEEeCCCCCCcc-cc-Cce
Confidence 33 5899999999999999999999642 3443321 111 134566664 5553 23 359
Q ss_pred EEEeCcHHHHHHHHhC
Q 043334 840 FLVLNHPQLVDAFSSF 855 (903)
Q Consensus 840 ~lv~~~~~li~~l~~~ 855 (903)
+++++++++.+.++.+
T Consensus 230 ~l~t~d~~l~~~~~~~ 245 (438)
T PRK15407 230 AVFTNDPLLKKIIESF 245 (438)
T ss_pred EEEECCHHHHHHHHHH
Confidence 9999988777665543
No 248
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.52 E-value=2.7e-13 Score=144.29 Aligned_cols=268 Identities=12% Similarity=0.038 Sum_probs=185.5
Q ss_pred CCHHHHHHHHhhhhccCCCCCeEEccCCCCC----CC-CcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHHHhhc
Q 043334 596 RSAISVLNSAELSITETPNSGLIHMDVDQSF----LP-IPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYIKSNF 665 (903)
Q Consensus 596 ~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~----~~-~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l~~~~ 665 (903)
+.+|--+.+|-+ ++..+..|||++|.-- -| .-+.|.++-.+... +|.+..|.+++.+..++.+-. .
T Consensus 36 pDpILGVTeAfk---~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G-~ 111 (427)
T KOG1411|consen 36 PDPILGVTEAFK---KDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALG-D 111 (427)
T ss_pred CCCcccHHHHHh---cCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhc-C
Confidence 344544444433 3677889999998532 11 34555555443322 477889999999888877632 1
Q ss_pred CCCCCCCCcEEec--CchHHHHHHHHH--HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHH
Q 043334 666 GFPIDINAEFIYA--DCSQSLFNKLVL--CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTI 741 (903)
Q Consensus 666 G~~~~pe~~I~vt--~Gs~~al~~ll~--~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~ 741 (903)
+.+.-.+.+|+.+ -.+++++..... +..-++..|.+|+|+|+++...++.+|+.+..+..-....-.+|.+.+-+.
T Consensus 112 ~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~led 191 (427)
T KOG1411|consen 112 NSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLED 191 (427)
T ss_pred CchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHH
Confidence 2222222244433 233444443222 223468899999999999999999999999888765444556888888777
Q ss_pred hhcCCCcEEEEECCC-CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc
Q 043334 742 LETVKKPWVYISGPT-INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN 820 (903)
Q Consensus 742 l~~~~~~~vil~~P~-~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~ 820 (903)
+.......+++++-+ |||||.--+.|+|++|.++.++.+.+-+.|-+|.++.-+.-....++++-++. . ...
T Consensus 192 l~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~---~----g~~ 264 (427)
T KOG1411|consen 192 LGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE---D----GHE 264 (427)
T ss_pred HhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH---c----CCc
Confidence 776655578888888 99999999999999999999999999999999987765443322233332222 2 147
Q ss_pred eEEEccCchhcccccceeeE--EEeCcHHHHHHHHh----CCC--CCCCcHHHHHHHHHHHh
Q 043334 821 VSLLGGLSLKMLTGALKFGF--LVLNHPQLVDAFSS----FPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 821 vI~l~S~SK~~g~~GlRiG~--lv~~~~~li~~l~~----~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
+.++.||+|..|+.|-|+|. +++.+.+...++.+ +.. +++|+.-...++...|.
T Consensus 265 ~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~ 326 (427)
T KOG1411|consen 265 ILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILS 326 (427)
T ss_pred eEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccC
Confidence 99999999999999999995 46666545555443 222 78888888888888884
No 249
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=99.52 E-value=1.4e-13 Score=144.90 Aligned_cols=104 Identities=21% Similarity=0.326 Sum_probs=87.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
+|.+|||+|||||.+++.+++..+..+|+|+|+|+.|++.|+++....+. .+++|+++|+.+++
T Consensus 51 ~g~~vLDva~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~----------------~~i~fv~~dAe~LP 114 (238)
T COG2226 51 PGDKVLDVACGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGV----------------QNVEFVVGDAENLP 114 (238)
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCc----------------cceEEEEechhhCC
Confidence 68999999999999999999999888999999999999999999976654 24999999999998
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.++. +||+|.+. +..+ ....+..+++|++|+|||||++++
T Consensus 115 f~D~-sFD~vt~~----------fglr----------------------------nv~d~~~aL~E~~RVlKpgG~~~v 154 (238)
T COG2226 115 FPDN-SFDAVTIS----------FGLR----------------------------NVTDIDKALKEMYRVLKPGGRLLV 154 (238)
T ss_pred CCCC-ccCEEEee----------ehhh----------------------------cCCCHHHHHHHHHHhhcCCeEEEE
Confidence 7654 99999742 0111 111255899999999999999888
No 250
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.51 E-value=5.2e-12 Score=143.83 Aligned_cols=229 Identities=13% Similarity=0.089 Sum_probs=153.2
Q ss_pred CCeEEccCCC-CCCCCcHHHHHHHHHHHHccC-------C-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecC
Q 043334 615 SGLIHMDVDQ-SFLPIPSLVKAAIFESFARQN-------M-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYAD 679 (903)
Q Consensus 615 ~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~-------~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~ 679 (903)
...++|+.++ -++...+.+.+++.+++.+|. . ..|..+..+.+++.+++.+|.+. .+++++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~----~l~~~s 79 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE----AFIVPS 79 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe----EEEECC
Confidence 4578887654 456677788888888876652 1 12445677888999999888742 488999
Q ss_pred chHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-----CCCcEEEEEC
Q 043334 680 CSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-----VKKPWVYISG 754 (903)
Q Consensus 680 Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-----~~~~~vil~~ 754 (903)
|+...+. +...+.++||.|++..-.|......++......+.++. .|++.+++.++. .++.+|++++
T Consensus 80 G~~a~~~-~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~v~~ 151 (370)
T PRK05937 80 GYMANLG-LCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFGRIFIFVCS 151 (370)
T ss_pred hHHHHHH-HHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCCcEEEEEec
Confidence 9876654 45556678898888888888887777766544444432 578999988863 2334677899
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc
Q 043334 755 PTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG 834 (903)
Q Consensus 755 P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~ 834 (903)
++ |+||.+.+ +++|.++|+++|+++++||+|+.-.++.... .....+ +.. +..+.+.||||.+|..
T Consensus 152 v~-s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~------g~~~~~-~~~---~~~~~~~tlsK~~g~~ 217 (370)
T PRK05937 152 VY-SFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGK------GFCHSL-GYE---NFYAVLVTYSKALGSM 217 (370)
T ss_pred CC-CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCC------chHHhh-CCC---CCcEEEEechhhhhcC
Confidence 98 99999999 7888889999999999999997533332211 111111 111 2346789999999977
Q ss_pred cceeeEEEeCcHHHHHHHHhCC-C---CCCCcHHHHHHHHHHH
Q 043334 835 ALKFGFLVLNHPQLVDAFSSFP-G---LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 835 GlRiG~lv~~~~~li~~l~~~~-~---~~~~s~~~Q~aa~~~L 873 (903)
| +.+++.++ +.+.+.... . ..+.+.+...++..++
T Consensus 218 G---~~vl~~~~-~~~~~~~~~~~~~~s~~~~~~~~~a~~aal 256 (370)
T PRK05937 218 G---AALLSSSE-VKQDLMLNSPPLRYSTGLPPHLLISIQVAY 256 (370)
T ss_pred c---eEEEcCHH-HHHHHHHhCCCCeecCCCCHHHHHHHHHHH
Confidence 7 33455554 555554321 1 3344555555554555
No 251
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=99.51 E-value=2.8e-13 Score=138.42 Aligned_cols=138 Identities=17% Similarity=0.200 Sum_probs=103.0
Q ss_pred hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhc
Q 043334 13 WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKK 92 (903)
Q Consensus 13 w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~ 92 (903)
|...+.+.+..... .++.+|||+|||+|.+++.++...++.+|+|+|+|+.|++.+++|++.+++
T Consensus 27 ~~~~~~d~i~~~~~--~~~~~vLDiGcGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~------------- 91 (181)
T TIGR00138 27 WERHILDSLKLLEY--LDGKKVIDIGSGAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGL------------- 91 (181)
T ss_pred HHHHHHHHHHHHHh--cCCCeEEEecCCCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCC-------------
Confidence 44455555433222 347899999999999999999887778999999999999999999988876
Q ss_pred ccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHH
Q 043334 93 TLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARA 172 (903)
Q Consensus 93 ~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~ 172 (903)
++++++++|+.++.. .++||+|++|. + .. +..+
T Consensus 92 ---~~i~~i~~d~~~~~~--~~~fD~I~s~~-~------~~-----------------------------------~~~~ 124 (181)
T TIGR00138 92 ---NNVEIVNGRAEDFQH--EEQFDVITSRA-L------AS-----------------------------------LNVL 124 (181)
T ss_pred ---CCeEEEecchhhccc--cCCccEEEehh-h------hC-----------------------------------HHHH
Confidence 479999999988632 34899999753 0 00 2256
Q ss_pred HHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHH---CCCeEEEE
Q 043334 173 VEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFER---RGFRVDKL 213 (903)
Q Consensus 173 l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~---~gf~~~~~ 213 (903)
++.+.++|+|||.+++.++.....+. ..+.++ .||+.+..
T Consensus 125 ~~~~~~~LkpgG~lvi~~~~~~~~~~-~~~~e~~~~~~~~~~~~ 167 (181)
T TIGR00138 125 LELTLNLLKVGGYFLAYKGKKYLDEI-EEAKRKCQVLGVEPLEV 167 (181)
T ss_pred HHHHHHhcCCCCEEEEEcCCCcHHHH-HHHHHhhhhcCceEeec
Confidence 78889999999999998876554443 334444 58887665
No 252
>PRK11727 23S rRNA mA1618 methyltransferase; Provisional
Probab=99.49 E-value=7.9e-13 Score=145.57 Aligned_cols=166 Identities=15% Similarity=0.123 Sum_probs=114.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-ccccCCCCcchhhhcccCCcEEEEE-ccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN-ALDEKGQPIYDAEKKTLLDRVEFHE-SDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~-gl~~~~~~~~~~~~~~~~~~v~~~~-gDl~~ 107 (903)
++.++||||||+|.+...++.+.++++++|+|+|+.+++.|++|+..| ++ .++++++. .|...
T Consensus 114 ~~~~vLDIGtGag~I~~lLa~~~~~~~~~atDId~~Al~~A~~Nv~~Np~l---------------~~~I~~~~~~~~~~ 178 (321)
T PRK11727 114 ANVRVLDIGVGANCIYPLIGVHEYGWRFVGSDIDPQALASAQAIISANPGL---------------NGAIRLRLQKDSKA 178 (321)
T ss_pred CCceEEEecCCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhccCC---------------cCcEEEEEccchhh
Confidence 457999999999999999888888899999999999999999999999 67 35788864 33332
Q ss_pred ccc---CCCCceeEEEECCCCCCCCCccchh--hHH---hhhhhhhhhhhcccccc-ccccccccccHHHHHHHHHHHhh
Q 043334 108 YCR---DHDIQLERIVGCIPQILNPNPDAMS--KII---TENASEEFLYSLSNYCA-LQGFVEDQFGLGLIARAVEEGIG 178 (903)
Q Consensus 108 ~~~---~~~~~fD~Iv~NpPy~~~~~~~~l~--~~~---~~~~~~~~~~~l~~~~a-l~~~v~~~~g~~~~~~~l~~~~~ 178 (903)
... ...++||+|+|||||+......... ... ..+.+.. .. .+..+ ....+...+...++.+++++...
T Consensus 179 i~~~i~~~~~~fDlivcNPPf~~s~~ea~~~~~rk~r~~ar~~~~~--~~-l~f~g~~~EL~~~GGe~~fi~~mi~eS~~ 255 (321)
T PRK11727 179 IFKGIIHKNERFDATLCNPPFHASAAEARAGSQRKLRNLGLNKDKK--KV-LNFGGQQAELWCEGGEVAFIKRMIEESKA 255 (321)
T ss_pred hhhcccccCCceEEEEeCCCCcCcchhhccchhhHHhhhhccCCCc--cc-cCCcchhhheeeCCcEeeeehHhhHHHHH
Confidence 221 1234899999999999765432111 000 0000000 00 00000 00001112235778899999999
Q ss_pred cccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 179 VIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 179 ~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.++..|.+...++.......+.+.+++.|...+.+
T Consensus 256 ~~~~~gwftsmv~kk~~l~~l~~~L~~~~~~~~~~ 290 (321)
T PRK11727 256 FAKQVLWFTSLVSKKENLPPLYRALKKVGAVEVKT 290 (321)
T ss_pred HHhhCcEEEEEeeccCCHHHHHHHHHHcCCceEEE
Confidence 99999999999988888888889999999865554
No 253
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.49 E-value=3.5e-12 Score=145.44 Aligned_cols=261 Identities=10% Similarity=0.046 Sum_probs=168.8
Q ss_pred CCCCCeEEccCC--CCCCCCcHHHHHHHHHHHHccCC--CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLPIPSLVKAAIFESFARQNM--SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~~p~~v~~al~~al~~y~~--~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
..|...+|+..| ...++..+.+++++.+.+.++.. ..-..++++++++.+.. .. +..++++++++++...
T Consensus 26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~----~~--~~~~~~~~SGseA~~~ 99 (375)
T PRK04260 26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIG----DK--DYLAFFCNSGAEANEA 99 (375)
T ss_pred CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhc----Cc--CCEEEEcCccHHHHHH
Confidence 456778999665 34455677899999998865321 12234556666665532 11 2246788888888887
Q ss_pred HHHHhc--cCCCeEEEcCCCcHH-HHHHHHHcCCEEEE------ecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCC
Q 043334 688 LVLCCI--LEGGTLCFPAGSNGN-YVSAARFLKANIVN------IPTESEVGFKMTEKTLVTILETVKKPWVYISGPTIN 758 (903)
Q Consensus 688 ll~~l~--~pGD~Vlv~~P~y~~-~~~~~~~~G~~vv~------v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~N 758 (903)
++.... ..++.|++.+.+|-. ........|.+... ++......+ .|++.+++.+.++. .+|++.+++ |
T Consensus 100 Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dl~~l~~~l~~~~-a~vi~e~v~-~ 176 (375)
T PRK04260 100 AIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIF-NDLNSVKALVNKNT-AAVMLELVQ-G 176 (375)
T ss_pred HHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCC-CCHHHHHHhcCCCe-EEEEECCeE-C
Confidence 666542 345778888887764 33333333322110 000000011 37899998886544 478888887 9
Q ss_pred CcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce
Q 043334 759 PTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK 837 (903)
Q Consensus 759 PTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR 837 (903)
++|.+. +.+.+++|.++|+++|+++|+||+|.++...+..+ . .....-.| + +.||||.++ +|+|
T Consensus 177 ~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~---~----~~~~~~~p---d----i~t~sK~l~-~G~~ 241 (375)
T PRK04260 177 ESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY---A----FEHYGIEP---D----IFTLAKGLA-NGVP 241 (375)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh---h----hHhhCCCC---C----EEEeccccc-CCcc
Confidence 999875 46789999999999999999999997754444321 1 11111222 2 348999997 8999
Q ss_pred eeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 838 FGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 838 iG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+||++++++ +.+.+.... .+.+.+.+.|.++.++|+.-. .+++++++++..+.+++.+.
T Consensus 242 ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~-----~~~~~~~~~~~~~~~~~~l~ 302 (375)
T PRK04260 242 VGAMLAKSS-LGGAFGYGSHGSTFGGNKLSMAAASATLDIML-----TAGFLEQALENGNYLQEQLQ 302 (375)
T ss_pred eEEEEEcHH-HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHH
Confidence 999999987 888886532 366778899999999994211 12556677777777776653
No 254
>TIGR01177 conserved hypothetical protein TIGR01177. This family is found exclusively in the Archaea.
Probab=99.49 E-value=4.1e-13 Score=150.27 Aligned_cols=135 Identities=21% Similarity=0.167 Sum_probs=106.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||||.+++.++.. +.+++|+|+|+.|++.|+.|++.+++ .++.+.++|+.+.
T Consensus 181 ~~g~~vLDp~cGtG~~lieaa~~--~~~v~g~Di~~~~~~~a~~nl~~~g~----------------~~i~~~~~D~~~l 242 (329)
T TIGR01177 181 TEGDRVLDPFCGTGGFLIEAGLM--GAKVIGCDIDWKMVAGARINLEHYGI----------------EDFFVKRGDATKL 242 (329)
T ss_pred CCcCEEEECCCCCCHHHHHHHHh--CCeEEEEcCCHHHHHHHHHHHHHhCC----------------CCCeEEecchhcC
Confidence 35789999999999999987765 78999999999999999999988887 2488999999987
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+... ++||+|++||||....... .....+++..+++++.++|||||++++
T Consensus 243 ~~~~-~~~D~Iv~dPPyg~~~~~~-----------------------------~~~~~~l~~~~l~~~~r~Lk~gG~lv~ 292 (329)
T TIGR01177 243 PLSS-ESVDAIATDPPYGRSTTAA-----------------------------GDGLESLYERSLEEFHEVLKSEGWIVY 292 (329)
T ss_pred Cccc-CCCCEEEECCCCcCccccc-----------------------------CCchHHHHHHHHHHHHHHccCCcEEEE
Confidence 5443 4899999999997532211 011123456899999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.++..... .++++++|| +...+.
T Consensus 293 ~~~~~~~~---~~~~~~~g~-i~~~~~ 315 (329)
T TIGR01177 293 AVPTRIDL---ESLAEDAFR-VVKRFE 315 (329)
T ss_pred EEcCCCCH---HHHHhhcCc-chheee
Confidence 88766443 357899999 766643
No 255
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=99.49 E-value=1.3e-13 Score=146.29 Aligned_cols=132 Identities=21% Similarity=0.338 Sum_probs=84.0
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhh
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAE 90 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~ 90 (903)
-|...+.+.+.. .++.+|||+|||||.++..+++..+ ..+|+|+|+|+.|++.|+++....+.
T Consensus 34 ~wr~~~~~~~~~-----~~g~~vLDv~~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~----------- 97 (233)
T PF01209_consen 34 RWRRKLIKLLGL-----RPGDRVLDVACGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGL----------- 97 (233)
T ss_dssp ---SHHHHHHT-------S--EEEEET-TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT------------
T ss_pred HHHHHHHhccCC-----CCCCEEEEeCCChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCC-----------
Confidence 355544444332 3578999999999999999998754 57999999999999999999987765
Q ss_pred hcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHH
Q 043334 91 KKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIA 170 (903)
Q Consensus 91 ~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~ 170 (903)
.+++++++|..+++.++ ++||+|++.-- ++. .....
T Consensus 98 -----~~i~~v~~da~~lp~~d-~sfD~v~~~fg-------------lrn-------------------------~~d~~ 133 (233)
T PF01209_consen 98 -----QNIEFVQGDAEDLPFPD-NSFDAVTCSFG-------------LRN-------------------------FPDRE 133 (233)
T ss_dssp ------SEEEEE-BTTB--S-T-T-EEEEEEES--------------GGG--------------------------SSHH
T ss_pred -----CCeeEEEcCHHHhcCCC-CceeEEEHHhh-------------HHh-------------------------hCCHH
Confidence 48999999999987665 49999984211 110 01134
Q ss_pred HHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHH
Q 043334 171 RAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLF 203 (903)
Q Consensus 171 ~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll 203 (903)
+.+++++|+|||||++++.....+....++.+.
T Consensus 134 ~~l~E~~RVLkPGG~l~ile~~~p~~~~~~~~~ 166 (233)
T PF01209_consen 134 RALREMYRVLKPGGRLVILEFSKPRNPLLRALY 166 (233)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEB-SSHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEEeeccCCCCchhhcee
Confidence 789999999999999987444433333434344
No 256
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.49 E-value=6.8e-12 Score=141.24 Aligned_cols=185 Identities=11% Similarity=0.069 Sum_probs=133.9
Q ss_pred HHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcHHHHHHH
Q 043334 635 AAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNGNYVSAA 713 (903)
Q Consensus 635 ~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~~~~~~~ 713 (903)
+++.+.+.+... +..+....+++.+++.+|.+ ++++++|+++++..++.++ +.+||+|+++.++|..+...+
T Consensus 3 ~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~~~-----~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~ 75 (352)
T cd00616 3 EAVEEVLDSGWL--TLGPKVREFEKAFAEYLGVK-----YAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAI 75 (352)
T ss_pred HHHHHHHHcCCc--cCCHHHHHHHHHHHHHhCCC-----eEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHH
Confidence 345555544322 22234556666666666742 4667777888999989888 689999999999999999999
Q ss_pred HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCC-
Q 043334 714 RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGL- 792 (903)
Q Consensus 714 ~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l- 792 (903)
...|++++.+++++ +++.+|++.+++.+++++ ++|+++ ||+|.+.+ +++|.++|+++|+++|+|++++..
T Consensus 76 ~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~-~~v~~~----~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~ 146 (352)
T cd00616 76 LLLGATPVFVDIDP-DTYNIDPELIEAAITPRT-KAIIPV----HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGA 146 (352)
T ss_pred HHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCC-eEEEEE----CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCC
Confidence 99999999999864 468899999999987666 467664 57898877 777888899999999999999632
Q ss_pred ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc--hhcccccceeeEEEeCcHHHHHHHHh
Q 043334 793 EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS--LKMLTGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 793 ~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S--K~~g~~GlRiG~lv~~~~~li~~l~~ 854 (903)
.+.+.. +.. ...+.+.||+ |.+ ++.+.|+++++++++.+.+..
T Consensus 147 ~~~~~~------------~~~-----~~d~~~~S~~~~K~~--~~~~gg~~~~~~~~~~~~~~~ 191 (352)
T cd00616 147 TYKGRK------------VGT-----FGDAGAFSFHPTKNL--TTGEGGAVVTNDEELAERARL 191 (352)
T ss_pred eECCEE------------ccc-----CcceeEEcCCCCCCC--cccCceEEEECCHHHHHHHHH
Confidence 222111 111 1245677776 877 444679999987557776654
No 257
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.48 E-value=2e-12 Score=151.87 Aligned_cols=207 Identities=14% Similarity=0.136 Sum_probs=156.9
Q ss_pred EccCCCCCCCCcHHHHHHHHHH--HHccC------CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH-
Q 043334 619 HMDVDQSFLPIPSLVKAAIFES--FARQN------MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV- 689 (903)
Q Consensus 619 dLs~g~p~~~~p~~v~~al~~a--l~~y~------~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll- 689 (903)
-++.|++++..|+.+.+.+.+. ...|. ..+|..+++.++++++++.+|++.. .+..++|+.+.+..+.
T Consensus 72 ~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~---~l~~~~GA~a~~~~l~~ 148 (481)
T PRK04366 72 FYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAV---TLQPAAGAHGELTGLLM 148 (481)
T ss_pred eecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCce---EEEeCcHHHHHHHHHHH
Confidence 3678888888888888888765 23322 3567889999999999999998632 6777788777765432
Q ss_pred -H-HhccCCC----eEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 690 -L-CCILEGG----TLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 690 -~-~l~~pGD----~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
. .++++|| +|++++|+|+.|...++..|++++.++++. +|.+|++++++.+++++ ++|++++| ||||.+
T Consensus 149 ~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~--~~~~D~e~L~~~i~~~t-~~V~v~~P--n~tG~~ 223 (481)
T PRK04366 149 IRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNE--DGLVDLEALKAAVGEDT-AALMLTNP--NTLGLF 223 (481)
T ss_pred HHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCC--CCCcCHHHHHhhcccCC-eEEEEeCC--CCcccc
Confidence 2 3467777 999999999999999999999999999853 57899999999998777 48999998 499954
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc----cceee
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG----ALKFG 839 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~----GlRiG 839 (903)
..++++|+++|+++|+++++|.++..-..+... .... +..++++|..|.++.| |--+|
T Consensus 224 --~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~------------~~~~----GaD~~~~~~hK~l~~P~g~Ggp~~G 285 (481)
T PRK04366 224 --ERNILEIAEIVHEAGGLLYYDGANLNAILGKAR------------PGDM----GFDVVHLNLHKTFSTPHGGGGPGSG 285 (481)
T ss_pred --chHHHHHHHHHHHcCCEEEEEecChhhhcccCC------------cccc----CCCEEEEechhhcCCCCCCCCCCee
Confidence 357999999999999999999998311111000 0111 3578999999998744 44578
Q ss_pred EEEeCcHHHHHHH
Q 043334 840 FLVLNHPQLVDAF 852 (903)
Q Consensus 840 ~lv~~~~~li~~l 852 (903)
++.+.++ +.+.+
T Consensus 286 ~l~~~~~-~~~~l 297 (481)
T PRK04366 286 PVGVKEE-LAPFL 297 (481)
T ss_pred eeeehhh-hHhhC
Confidence 8888776 66655
No 258
>PLN00144 acetylornithine transaminase
Probab=99.47 E-value=5.3e-12 Score=144.30 Aligned_cols=264 Identities=13% Similarity=0.084 Sum_probs=168.5
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCC--CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMS--ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~--~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..|. ..++ ..+.+.+++.+.+.+.... ....+....+++.+.+.. +.+ .++++++++++..
T Consensus 12 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~--~~~---~v~f~~sGseA~e 86 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASS--FAD---RVFFCNSGTEANE 86 (382)
T ss_pred CCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcC--CCC---eEEEeCCcHHHHH
Confidence 4677889986553 2333 4678888888887653221 122444566777776643 222 7999998888888
Q ss_pred HHHHHhcc---------C------CCeEEEcCCCcHHHHHHHHHcCCEE-E---EecCCCCCCc--ccCHHHHHHHhhcC
Q 043334 687 KLVLCCIL---------E------GGTLCFPAGSNGNYVSAARFLKANI-V---NIPTESEVGF--KMTEKTLVTILETV 745 (903)
Q Consensus 687 ~ll~~l~~---------p------GD~Vlv~~P~y~~~~~~~~~~G~~v-v---~v~~~~~~~f--~ld~~~L~~~l~~~ 745 (903)
.++..... + ..+|+....+|-+....+....... . ..|......+ ..|++.+++.+...
T Consensus 87 ~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 166 (382)
T PLN00144 87 AAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG 166 (382)
T ss_pred HHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC
Confidence 77765421 0 1357777777765443332222111 0 0111110000 02689999888644
Q ss_pred CCcEEEEECCCCCCcccCCCHHH--HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 746 KKPWVYISGPTINPTGLLYSNKE--IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG~v~s~ee--l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
. ...++..|.||| |.+++.+. +++|.++|++||+++|+||+|.++...+... . .....-.| |
T Consensus 167 ~-~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~---~----~~~~~~~P---D---- 230 (382)
T PLN00144 167 K-TAAVFVEPVQGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLW---A----HEAYGVEP---D---- 230 (382)
T ss_pred C-eEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHh---h----hhhcCCCC---C----
Confidence 4 356677788899 65665445 9999999999999999999998776555431 0 11111122 2
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+.||||.++ +|+|+||++++++ +++.+.... .+.+.+++.+.++.+.|+.-+. ..+.+++.++.+.++++.+.
T Consensus 231 i~t~sK~l~-~G~pig~v~~~~~-~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~l~~ 305 (382)
T PLN00144 231 IMTLAKPLA-GGLPIGAVLVTEK-VASAINPGDHGSTFAGGPLVCNAALAVLDKISK--PGFLASVAKKGEYLRELLRR 305 (382)
T ss_pred EEEeccccc-CCcceEEEEEcHH-HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHH
Confidence 889999997 8999999999987 888876432 3677888999999866632111 34667788888887665543
No 259
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=99.46 E-value=4.8e-13 Score=139.30 Aligned_cols=136 Identities=13% Similarity=0.087 Sum_probs=102.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccc-ccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDL-LAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl-~~~ 108 (903)
++.+|||+|||+|..+..+++..++.+|+|+|+|++|++.|++++..+++ .++.++++|+ ..+
T Consensus 40 ~~~~VLDiGcGtG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~----------------~~v~~~~~d~~~~l 103 (202)
T PRK00121 40 DAPIHLEIGFGKGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGL----------------TNLRLLCGDAVEVL 103 (202)
T ss_pred CCCeEEEEccCCCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCC----------------CCEEEEecCHHHHH
Confidence 45799999999999999999988888999999999999999999987765 4799999999 544
Q ss_pred cc-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 109 CR-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 109 ~~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.. ...++||+|++|.|.......+... ......+++++.++|||||.++
T Consensus 104 ~~~~~~~~~D~V~~~~~~p~~~~~~~~~------------------------------~~~~~~~l~~i~~~LkpgG~l~ 153 (202)
T PRK00121 104 LDMFPDGSLDRIYLNFPDPWPKKRHHKR------------------------------RLVQPEFLALYARKLKPGGEIH 153 (202)
T ss_pred HHHcCccccceEEEECCCCCCCcccccc------------------------------ccCCHHHHHHHHHHcCCCCEEE
Confidence 31 1234899999875432111101000 0012378999999999999999
Q ss_pred EEeCCCCcHHHHHHHHHHCCCeEE
Q 043334 188 FNMGGRPGQGVCKRLFERRGFRVD 211 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~gf~~~ 211 (903)
+..........+.+.+++.|+...
T Consensus 154 i~~~~~~~~~~~~~~~~~~g~~~~ 177 (202)
T PRK00121 154 FATDWEGYAEYMLEVLSAEGGFLV 177 (202)
T ss_pred EEcCCHHHHHHHHHHHHhCccccc
Confidence 987766656666778888887654
No 260
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.46 E-value=1.3e-11 Score=141.92 Aligned_cols=233 Identities=8% Similarity=0.035 Sum_probs=152.5
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHcc-CCCC-CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQ-NMSE-SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y-~~~~-G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..| ...++ ..|.+.+++.+.+.+. .... ...+....+++.+.+..+. + .++++++++++..
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~----~-~~~f~~SGseA~e 106 (397)
T TIGR03246 32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFA----D-KVFFCNSGAEANE 106 (397)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC----C-EEEEeCCcHHHHH
Confidence 467789999765 34444 5788999998888763 2111 2345567788888876542 2 6888888888888
Q ss_pred HHHHHhc-------cCC-CeEEEcCCCcHH-HHHHHHHcCCE------------EEEecCCCCCCcccCHHHHHHHhhcC
Q 043334 687 KLVLCCI-------LEG-GTLCFPAGSNGN-YVSAARFLKAN------------IVNIPTESEVGFKMTEKTLVTILETV 745 (903)
Q Consensus 687 ~ll~~l~-------~pG-D~Vlv~~P~y~~-~~~~~~~~G~~------------vv~v~~~~~~~f~ld~~~L~~~l~~~ 745 (903)
.++.... .+| +.|+..+-+|-+ ........|.. +..+|. .|++.+++.+.++
T Consensus 107 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 179 (397)
T TIGR03246 107 AALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK 179 (397)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHHhccC
Confidence 7777551 122 456665555544 33333333321 111211 3789999998755
Q ss_pred CCcEEEEECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEE
Q 043334 746 KKPWVYISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLL 824 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l 824 (903)
. .+|++. |.+++.|.+. +.+.+++|.++|++||+++|.||+|.++-..|... . .....-.+ . +
T Consensus 180 ~-aavi~E-pi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~---a----~~~~gv~p-----D--i 243 (397)
T TIGR03246 180 T-CAVIVE-PIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY---A----YMHYGVTP-----D--I 243 (397)
T ss_pred e-EEEEEe-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch---h----hhhcCCCC-----C--E
Confidence 4 355555 6524555443 89999999999999999999999997764444321 1 11111112 1 2
Q ss_pred ccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHh
Q 043334 825 GGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 825 ~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
-+|||.++ .|+|+||++++++ +++.+.... .+.+.+++.+.++.+.|+
T Consensus 244 ~t~~K~lg-gG~pigav~~~~~-i~~~~~~~~~~~t~~~~p~~~aaa~a~l~ 293 (397)
T TIGR03246 244 LTSAKALG-GGFPIGAMLTTTE-IAAHLKVGTHGTTYGGNPLACAVAGKVLD 293 (397)
T ss_pred EEeehhhh-CCcceeEEEEcHH-HHHhccCCCcCCCCCCCHHHHHHHHHHHH
Confidence 38999997 7999999999887 888886542 255677888988888885
No 261
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.46 E-value=1.5e-11 Score=137.62 Aligned_cols=192 Identities=13% Similarity=0.101 Sum_probs=145.9
Q ss_pred cHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcHH
Q 043334 630 PSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNGN 708 (903)
Q Consensus 630 p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~~ 708 (903)
....++++.+.+.+...+.|. ...++++.++++.|++.. |.+.|| +.++.+++.++ +.|||+|+++..+|..
T Consensus 14 ~~~e~~~v~~vl~sg~i~~G~--~v~~FE~~~ae~~G~k~a----va~~sg-T~AL~laL~al~ig~GDeVI~ps~TfvA 86 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTGGP--FVRRFEQAFAEYLGVKYA----VAVSSG-TAALHLALLALAIGPGDEVIVPSFTFVA 86 (374)
T ss_pred chHHHHHHHHHHHcCCeecCh--HHHHHHHHHHHHhCCCeE----EEecCh-HHHHHHHHHhcCCCCCCEEEecCCchHH
Confidence 456678888888776555543 456677788888888744 555555 55666666643 6999999999999999
Q ss_pred HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecC
Q 043334 709 YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTA 788 (903)
Q Consensus 709 ~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~Dea 788 (903)
..+.+...|++++.+++++ +.|++|++.++++++++++ +|+..+-. |.... +++|.++|++||++||+|-+
T Consensus 87 Tan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tK-AIipVhl~----G~~~d---m~~i~~la~~~~l~vIEDaA 157 (374)
T COG0399 87 TANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTK-AIIPVHLA----GQPCD---MDAIMALAKRHGLPVIEDAA 157 (374)
T ss_pred HHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCe-EEEEehhc----cCCCC---HHHHHHHHHHcCCeEEEEcc
Confidence 9999999999999999987 5799999999999999875 77776555 66665 88899999999999999999
Q ss_pred CCC-CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccC--chhcccccceeeEEEeCcHHHHHHHHhCC
Q 043334 789 FSG-LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGL--SLKMLTGALKFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 789 Y~~-l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~--SK~~g~~GlRiG~lv~~~~~li~~l~~~~ 856 (903)
.+. -.|.|... ..+ -.+.+.|| +|.++ +| --|.++++++++.++++.++
T Consensus 158 qa~Ga~y~gk~v---------Gt~--------Gd~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr 209 (374)
T COG0399 158 QAHGATYKGKKV---------GSF--------GDIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLR 209 (374)
T ss_pred hhccCeecCccc---------ccc--------cceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHH
Confidence 864 34555542 111 23444554 68876 44 67999999998988887653
No 262
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.43 E-value=3e-11 Score=140.51 Aligned_cols=268 Identities=10% Similarity=0.030 Sum_probs=164.7
Q ss_pred cCCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCC---CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNM---SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~---~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..| ...++ .++.+.+++.+.+.+... .....+....+++.+.+..+...+ .++++++++++
T Consensus 37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~---~v~f~~sGsEA 113 (443)
T PRK08360 37 DIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNP---KVSFGLSGSDA 113 (443)
T ss_pred ECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCC---EEEEcCCHHHH
Confidence 3567788998766 44444 577888888888775322 122345566778878776543323 79999999999
Q ss_pred HHHHHHHhcc-CC-CeEEEcCCCcHHHH-HHHHHcCC------------EEEEecCCCC--CCcc--------cCHHHHH
Q 043334 685 FNKLVLCCIL-EG-GTLCFPAGSNGNYV-SAARFLKA------------NIVNIPTESE--VGFK--------MTEKTLV 739 (903)
Q Consensus 685 l~~ll~~l~~-pG-D~Vlv~~P~y~~~~-~~~~~~G~------------~vv~v~~~~~--~~f~--------ld~~~L~ 739 (903)
...++..... .| ..|+...-+|-+.. ......|. .+..+|.... ..|. -+.+.++
T Consensus 114 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (443)
T PRK08360 114 NDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIK 193 (443)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHH
Confidence 8887765421 22 45666665554432 22222221 1222222110 0010 1234455
Q ss_pred HHhhc---CCCcEEEEECCCCCCcccCCC-HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCC
Q 043334 740 TILET---VKKPWVYISGPTINPTGLLYS-NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSST 815 (903)
Q Consensus 740 ~~l~~---~~~~~vil~~P~~NPTG~v~s-~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~ 815 (903)
+.+.. ..+.+.++..|.|||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.+..+ . ....+-.+
T Consensus 194 ~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~---a----~~~~~~~p 266 (443)
T PRK08360 194 EKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF---A----IEHFGVEP 266 (443)
T ss_pred HHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch---h----hhhcCCCC
Confidence 55542 122356666688899999887 5579999999999999999999998876655431 1 11111122
Q ss_pred CCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHH
Q 043334 816 NSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRN 893 (903)
Q Consensus 816 ~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~ 893 (903)
.++ +|||+++ +|+|+||++++++ +++.+.... .+.+.+...|.++.++|+.-.. +.+.+.+.++-+.
T Consensus 267 ----Dii---tlsK~l~-~G~pigav~~~~~-i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~--~~l~~~~~~~g~~ 335 (443)
T PRK08360 267 ----DII---TLGKPLG-GGLPISATIGRAE-IMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE--KNLLKRAEKLGNY 335 (443)
T ss_pred ----CEE---Eeccccc-CCceeEEEEEcHH-HHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHH
Confidence 233 6799998 8999999999887 888887543 2666778889999988853111 1233444444444
Q ss_pred HHHHHH
Q 043334 894 LESRSK 899 (903)
Q Consensus 894 y~~Rr~ 899 (903)
++++.+
T Consensus 336 l~~~L~ 341 (443)
T PRK08360 336 TKKRLE 341 (443)
T ss_pred HHHHHH
Confidence 444433
No 263
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=99.43 E-value=1.2e-12 Score=141.19 Aligned_cols=128 Identities=27% Similarity=0.370 Sum_probs=95.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||||.+++++++ ++..+|+|+|+||.+++.|++|+.+|+++ ..+..-..+.....
T Consensus 162 ~g~~vlDvGcGSGILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~---------------~~~~~~~~~~~~~~ 225 (300)
T COG2264 162 KGKTVLDVGCGSGILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVE---------------LLVQAKGFLLLEVP 225 (300)
T ss_pred CCCEEEEecCChhHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCc---------------hhhhcccccchhhc
Confidence 789999999999999999776 45678999999999999999999999983 11223333333332
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. .++||+||+|. ..+ .+..+..++.+.|||||++++.
T Consensus 226 ~--~~~~DvIVANI-----------LA~------------------------------vl~~La~~~~~~lkpgg~lIlS 262 (300)
T COG2264 226 E--NGPFDVIVANI-----------LAE------------------------------VLVELAPDIKRLLKPGGRLILS 262 (300)
T ss_pred c--cCcccEEEehh-----------hHH------------------------------HHHHHHHHHHHHcCCCceEEEE
Confidence 2 23899999882 111 1337889999999999999985
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
---......+.+.+.+.||.+......
T Consensus 263 GIl~~q~~~V~~a~~~~gf~v~~~~~~ 289 (300)
T COG2264 263 GILEDQAESVAEAYEQAGFEVVEVLER 289 (300)
T ss_pred eehHhHHHHHHHHHHhCCCeEeEEEec
Confidence 433333455567888899999887544
No 264
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=99.43 E-value=1.7e-12 Score=133.45 Aligned_cols=125 Identities=14% Similarity=0.144 Sum_probs=99.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++..++.+|+|+|+|+.+++.|++|+..+++ .+++++++|.....
T Consensus 31 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~----------------~~i~~~~~d~~~~~ 94 (187)
T PRK08287 31 RAKHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGC----------------GNIDIIPGEAPIEL 94 (187)
T ss_pred CCCEEEEECCcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC----------------CCeEEEecCchhhc
Confidence 57899999999999999999988888999999999999999999987776 36999999975432
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. ++||+|+++-.. . .+..+++.+.+.|+|||++++.
T Consensus 95 -~--~~~D~v~~~~~~------~-----------------------------------~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 95 -P--GKADAIFIGGSG------G-----------------------------------NLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred -C--cCCCEEEECCCc------c-----------------------------------CHHHHHHHHHHhcCCCeEEEEE
Confidence 2 379999854110 0 0226788899999999999987
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.........+.+++++.||...+..
T Consensus 131 ~~~~~~~~~~~~~l~~~g~~~~~~~ 155 (187)
T PRK08287 131 FILLENLHSALAHLEKCGVSELDCV 155 (187)
T ss_pred EecHhhHHHHHHHHHHCCCCcceEE
Confidence 6555555666789999999766653
No 265
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=99.43 E-value=3.9e-12 Score=135.09 Aligned_cols=106 Identities=19% Similarity=0.250 Sum_probs=84.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|.++..+++.. ++.+|+|+|+++.+++.|++++...++ ++++++++|..+.
T Consensus 45 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~~ 108 (231)
T TIGR02752 45 AGTSALDVCCGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGL----------------HNVELVHGNAMEL 108 (231)
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCC----------------CceEEEEechhcC
Confidence 57899999999999999999876 457999999999999999999876655 4799999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+++......++ +..+++++.++|+|||.+++
T Consensus 109 ~~~~-~~fD~V~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lk~gG~l~~ 149 (231)
T TIGR02752 109 PFDD-NSFDYVTIGFGLRNVPD--------------------------------------YMQVLREMYRVVKPGGKVVC 149 (231)
T ss_pred CCCC-CCccEEEEecccccCCC--------------------------------------HHHHHHHHHHHcCcCeEEEE
Confidence 5433 48999987533221110 22679999999999999987
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 150 ~~ 151 (231)
T TIGR02752 150 LE 151 (231)
T ss_pred EE
Confidence 54
No 266
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=99.43 E-value=6.4e-13 Score=131.89 Aligned_cols=109 Identities=25% Similarity=0.373 Sum_probs=87.5
Q ss_pred CCCeEEEeCCccCHHHHHHH-HHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIA-EKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la-~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|.++..++ +..++.+++|+|+|++|++.|+++++.+++ ++++|.++|+.++
T Consensus 3 ~~~~iLDlGcG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~----------------~ni~~~~~d~~~l 66 (152)
T PF13847_consen 3 SNKKILDLGCGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGL----------------DNIEFIQGDIEDL 66 (152)
T ss_dssp TTSEEEEET-TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTS----------------TTEEEEESBTTCG
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccc----------------cccceEEeehhcc
Confidence 57899999999999999999 456788999999999999999999988887 4899999999995
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
...-.++||+|+++.++.... ....+++++.+.|+++|.+++
T Consensus 67 ~~~~~~~~D~I~~~~~l~~~~--------------------------------------~~~~~l~~~~~~lk~~G~~i~ 108 (152)
T PF13847_consen 67 PQELEEKFDIIISNGVLHHFP--------------------------------------DPEKVLKNIIRLLKPGGILII 108 (152)
T ss_dssp CGCSSTTEEEEEEESTGGGTS--------------------------------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCCCeeEEEEcCchhhcc--------------------------------------CHHHHHHHHHHHcCCCcEEEE
Confidence 421114899999876653111 022679999999999999998
Q ss_pred EeCC
Q 043334 189 NMGG 192 (903)
Q Consensus 189 ~~~~ 192 (903)
....
T Consensus 109 ~~~~ 112 (152)
T PF13847_consen 109 SDPN 112 (152)
T ss_dssp EEEE
T ss_pred EECC
Confidence 6554
No 267
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.43 E-value=3.4e-12 Score=147.76 Aligned_cols=156 Identities=10% Similarity=0.089 Sum_probs=121.7
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHH----HHHHHcCCEEEEecCCCC
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYV----SAARFLKANIVNIPTESE 728 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~----~~~~~~G~~vv~v~~~~~ 728 (903)
....+++.+++.+|.+ ..++++++++++..++.++++|||+|+++.++|.... ..+...|++++.++..
T Consensus 64 ~~~~le~~lA~l~g~~-----~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 136 (427)
T PRK05994 64 TNAVLEERVAALEGGT-----AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD-- 136 (427)
T ss_pred cHHHHHHHHHHHhCCC-----cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC--
Confidence 4667888888887764 2455566677777888889999999999999998643 3467789999998752
Q ss_pred CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 729 VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
|++.+++++++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+|++|+.-. ...+ +
T Consensus 137 -----d~~~l~~ai~~~t-klV~vesp~-NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~-~~~p---------l 196 (427)
T PRK05994 137 -----DPASFERAITPRT-KAIFIESIA-NPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY-LIRP---------I 196 (427)
T ss_pred -----CHHHHHHhcCcCC-eEEEEECCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCccccc-cCCc---------c
Confidence 6889999998777 599999998 99999998 7889999999999999999995211 1111 1
Q ss_pred hhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
. . +-.+++.|++|.+|.+|-.+|.+++
T Consensus 197 ---~-~----gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 197 ---E-H----GADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred ---c-c----CCcEEEEcCccccCCCCCcEEEEEE
Confidence 1 1 2468999999999888877886665
No 268
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=1.4e-11 Score=141.00 Aligned_cols=209 Identities=16% Similarity=0.178 Sum_probs=163.0
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCC--CCc-------hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMS--ESE-------IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~--~G~-------~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
+.+++.|+.+.... .|..+.+++.+.+..|..+ +|. .+..++.++.+++..|.+.. + +|++|.|++++
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~-~-eIvft~~tT~a 96 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS-D-EIVFTRGTTEA 96 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC-C-eEEEeCChhHH
Confidence 56788888776654 7889999999887655432 221 33556777888888887741 2 89999999999
Q ss_pred HHHHHHHh---ccCCCeEEEcCCCcHH----HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCC
Q 043334 685 FNKLVLCC---ILEGGTLCFPAGSNGN----YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTI 757 (903)
Q Consensus 685 l~~ll~~l---~~pGD~Vlv~~P~y~~----~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~ 757 (903)
++.+..++ +.+||+|++.+-.|.. +...++..|++++.+|+++ +..++.+.++..++++++ +|.++.-+
T Consensus 97 ln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~--~g~~~~~~~~~~i~~~Tk-lvais~vS- 172 (405)
T COG0520 97 LNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD--DGLLDLDALEKLITPKTK-LVALSHVS- 172 (405)
T ss_pred HHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC--CCCcCHHHHHHhcCCCce-EEEEECcc-
Confidence 99999999 6999999999887664 5566677899999999983 456899999999998884 99999998
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch-hcccccc
Q 043334 758 NPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL-KMLTGAL 836 (903)
Q Consensus 758 NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK-~~g~~Gl 836 (903)
|-||.+.+ +++|+++|+++|+++++|-+.+--.. + .+ +.. .+..++..|--| .+|-.|
T Consensus 173 n~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h~---~---id-------v~~----l~~Df~afsgHKwl~gP~G- 231 (405)
T COG0520 173 NVTGTVNP---VKEIAELAHEHGALVLVDAAQAAGHL---P---ID-------VQE----LGCDFLAFSGHKWLLGPTG- 231 (405)
T ss_pred ccccccch---HHHHHHHHHHcCCEEEEECccccCcc---C---CC-------chh----cCCCEEEEcccccccCCCc-
Confidence 99999988 99999999999999999998742110 1 11 112 147889999999 555447
Q ss_pred eeeEEEeCcHHHHHHH
Q 043334 837 KFGFLVLNHPQLVDAF 852 (903)
Q Consensus 837 RiG~lv~~~~~li~~l 852 (903)
+|.+.+.++ +.+.+
T Consensus 232 -iGvLy~r~~-~l~~l 245 (405)
T COG0520 232 -IGVLYVRKE-LLEEL 245 (405)
T ss_pred -eEEEEEchH-HHhhc
Confidence 799999988 77776
No 269
>PHA03412 putative methyltransferase; Provisional
Probab=99.42 E-value=1.7e-12 Score=135.46 Aligned_cols=108 Identities=14% Similarity=0.177 Sum_probs=83.1
Q ss_pred CCeEEEeCCccCHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKW---LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~---~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
+.+|||+|||+|.+++.+++.. +..+|+|+|+|+.|++.|++|. .++.++++|+..
T Consensus 50 ~grVLDlG~GSG~Lalala~~~~~~~~~~V~aVEID~~Al~~Ar~n~---------------------~~~~~~~~D~~~ 108 (241)
T PHA03412 50 SGSVVDLCAGIGGLSFAMVHMMMYAKPREIVCVELNHTYYKLGKRIV---------------------PEATWINADALT 108 (241)
T ss_pred CCEEEEccChHHHHHHHHHHhcccCCCcEEEEEECCHHHHHHHHhhc---------------------cCCEEEEcchhc
Confidence 5799999999999999998864 3469999999999999999886 358899999987
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.... ++||+||+||||........ + ....|.....++++.+.+++++|+ ++
T Consensus 109 ~~~~--~~FDlIIsNPPY~~~~~~d~------------------------~--ar~~g~~~~~~li~~A~~Ll~~G~-~I 159 (241)
T PHA03412 109 TEFD--TLFDMAISNPPFGKIKTSDF------------------------K--GKYTGAEFEYKVIERASQIARQGT-FI 159 (241)
T ss_pred cccc--CCccEEEECCCCCCcccccc------------------------C--CcccccHHHHHHHHHHHHHcCCCE-EE
Confidence 6432 38999999999996432110 0 123456677789999999555555 55
Q ss_pred E
Q 043334 188 F 188 (903)
Q Consensus 188 ~ 188 (903)
+
T Consensus 160 L 160 (241)
T PHA03412 160 I 160 (241)
T ss_pred e
Confidence 5
No 270
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.41 E-value=3.6e-11 Score=139.14 Aligned_cols=246 Identities=12% Similarity=0.099 Sum_probs=157.0
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCC---CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMS---ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~---~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..|. ..++ ..+.+.+++.+.+.+.... ....+....+++.+.+....... + .++++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~-~-~~~f~~sGseA 113 (421)
T PRK09792 36 DVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQ-A-KTAFFTTGAEA 113 (421)
T ss_pred eCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCC-c-eEEEeCChHHH
Confidence 35677889986553 3333 5778888888888764321 11344556677777665432111 2 67888888888
Q ss_pred HHHHHHHhcc-CC-CeEEEcCCCcHHHHH-HHHHcCC-------------EEEEecCCCC-CCcc--cCHHHHHHHhhc-
Q 043334 685 FNKLVLCCIL-EG-GTLCFPAGSNGNYVS-AARFLKA-------------NIVNIPTESE-VGFK--MTEKTLVTILET- 744 (903)
Q Consensus 685 l~~ll~~l~~-pG-D~Vlv~~P~y~~~~~-~~~~~G~-------------~vv~v~~~~~-~~f~--ld~~~L~~~l~~- 744 (903)
...++..... .| .+|+....+|-+... .....|. .++.+|...+ .+.. -+.+.+++.+..
T Consensus 114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~ 193 (421)
T PRK09792 114 VENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSD 193 (421)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhc
Confidence 7776655431 23 467777776655332 2222121 1222222111 1100 124777777762
Q ss_pred --CCCcEEEEECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 745 --VKKPWVYISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 745 --~~~~~vil~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
....+.++..|.|+|+|..+ +.+.+++|.++|++||+++|+||+|.++.+.+..+ ....++..| |
T Consensus 194 ~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-------a~~~~~~~p---D-- 261 (421)
T PRK09792 194 IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLF-------AMDHYADKP---D-- 261 (421)
T ss_pred cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh-------HHHhcCCCC---c--
Confidence 22235666777789999865 99999999999999999999999998876666432 122232222 2
Q ss_pred EEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHh
Q 043334 822 SLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 822 I~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
+.+|||.++ +|+|+||++++++ +++.+.... .+.+.+++.|.++.+.++
T Consensus 262 --i~t~gK~l~-~G~pigav~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 312 (421)
T PRK09792 262 --LMTMAKSLA-GGMPLSGVVGNAN-IMDAPAPGGLGGTYAGNPLAVAAAHAVLN 312 (421)
T ss_pred --EEEeehhhc-CCCceEEEEEcHH-HHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 689999998 8999999999887 888775432 367788899997777774
No 271
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=99.41 E-value=5.1e-12 Score=136.84 Aligned_cols=109 Identities=23% Similarity=0.257 Sum_probs=82.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||||.++..+++.. +..+|+|+|+|++|++.|+++..... ....++++++++|+.+
T Consensus 72 ~~~~~VLDlGcGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~-------------~~~~~~i~~~~~d~~~ 138 (261)
T PLN02233 72 KMGDRVLDLCCGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKA-------------KSCYKNIEWIEGDATD 138 (261)
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhh-------------hccCCCeEEEEccccc
Confidence 357899999999999999999875 34699999999999999987753211 0012479999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
++.+. ++||+|+++-.....++ ...++++++++|||||.++
T Consensus 139 lp~~~-~sfD~V~~~~~l~~~~d--------------------------------------~~~~l~ei~rvLkpGG~l~ 179 (261)
T PLN02233 139 LPFDD-CYFDAITMGYGLRNVVD--------------------------------------RLKAMQEMYRVLKPGSRVS 179 (261)
T ss_pred CCCCC-CCEeEEEEecccccCCC--------------------------------------HHHHHHHHHHHcCcCcEEE
Confidence 76543 38999986522221110 2378999999999999998
Q ss_pred EE
Q 043334 188 FN 189 (903)
Q Consensus 188 ~~ 189 (903)
+.
T Consensus 180 i~ 181 (261)
T PLN02233 180 IL 181 (261)
T ss_pred EE
Confidence 74
No 272
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.41 E-value=3.7e-11 Score=138.32 Aligned_cols=265 Identities=10% Similarity=0.038 Sum_probs=170.9
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCC--CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSE--SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~--G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
...|...+|+..|. ..++ ..+.+.+++.+.+....... -..+....+++.+.+..+ .. + .++++++++++.
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~-~-~v~f~~sGseA~ 111 (408)
T PRK04612 36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASR--FA-E-KVFLCNSGTEAN 111 (408)
T ss_pred ECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCC--CC-C-EEEEcCchHHHH
Confidence 35678899997663 3344 47788888888776532111 123445567777766432 11 3 799999999988
Q ss_pred HHHHHHhcc----CC-----CeEEEcCCCcHHHHHHH-HHcCCEEEE---ecCCCC---CCcccCHHHHHHHhhcCCCcE
Q 043334 686 NKLVLCCIL----EG-----GTLCFPAGSNGNYVSAA-RFLKANIVN---IPTESE---VGFKMTEKTLVTILETVKKPW 749 (903)
Q Consensus 686 ~~ll~~l~~----pG-----D~Vlv~~P~y~~~~~~~-~~~G~~vv~---v~~~~~---~~f~ld~~~L~~~l~~~~~~~ 749 (903)
..++..... .| ..|+....+|-+....+ ...|..... -|.... -.| .|++.+++.+...+ .+
T Consensus 112 e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~~-~a 189 (408)
T PRK04612 112 EAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAGGD-VA 189 (408)
T ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCCCC-EE
Confidence 887765431 12 35777777765543322 222211110 011100 012 37888998886544 58
Q ss_pred EEEECCCCCCcccCCC--HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccC
Q 043334 750 VYISGPTINPTGLLYS--NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGL 827 (903)
Q Consensus 750 vil~~P~~NPTG~v~s--~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~ 827 (903)
.++..|. +++|.+++ .+.+++|.++|+++|+++|.||+|.++-..+.. +... .. +.+..+.+|
T Consensus 190 avi~eP~-~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~---------~a~~-~~----~~~pdi~t~ 254 (408)
T PRK04612 190 AVMLEPI-QGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTL---------FAHW-QE----QVTPDIVTL 254 (408)
T ss_pred EEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCch---------hhhh-hc----CCCCCEEEE
Confidence 8889998 88888877 678999999999999999999999876554432 1111 11 346678899
Q ss_pred chhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 828 SLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 828 SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
||.++ +|+|+||++++++ +++.+.... .+.+.+++.+.++.+.|+.-.. +.+.+.+.++-+.++++.+.
T Consensus 255 ~K~l~-~G~piga~~~~~~-~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~l~~ 325 (408)
T PRK04612 255 AKALG-GGFPIGAMLAGPK-VAETMQFGAHGTTFGGNPLAAAVARVALRKLAS--PQIAANVARQSAALRAGLEA 325 (408)
T ss_pred cchhc-CCCceEEEEECHH-HHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH
Confidence 99998 8999999999977 888876533 2566789999999999853221 23444555555555555443
No 273
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]
Probab=99.41 E-value=5.7e-12 Score=125.59 Aligned_cols=130 Identities=20% Similarity=0.286 Sum_probs=98.0
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..+|++|+|+|||||.+++..+. ++..+|+|+|+|+++++.+++|+...+ .++.|+++|+.+
T Consensus 43 ~l~g~~V~DlG~GTG~La~ga~~-lGa~~V~~vdiD~~a~ei~r~N~~~l~-----------------g~v~f~~~dv~~ 104 (198)
T COG2263 43 DLEGKTVLDLGAGTGILAIGAAL-LGASRVLAVDIDPEALEIARANAEELL-----------------GDVEFVVADVSD 104 (198)
T ss_pred CcCCCEEEEcCCCcCHHHHHHHh-cCCcEEEEEecCHHHHHHHHHHHHhhC-----------------CceEEEEcchhh
Confidence 36789999999999999999665 567899999999999999999997632 589999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
... ++|.++.||||-.. .++++. .|+..+.+. +..+
T Consensus 105 ~~~----~~dtvimNPPFG~~----------~rhaDr--------------------------~Fl~~Ale~----s~vV 140 (198)
T COG2263 105 FRG----KFDTVIMNPPFGSQ----------RRHADR--------------------------PFLLKALEI----SDVV 140 (198)
T ss_pred cCC----ccceEEECCCCccc----------cccCCH--------------------------HHHHHHHHh----hheE
Confidence 743 79999999999853 122222 333333332 1344
Q ss_pred EEeCCCCcHHHHHHHHHHCCCeEEEEEehhhh
Q 043334 188 FNMGGRPGQGVCKRLFERRGFRVDKLWQTKIL 219 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~ 219 (903)
..++.....+.+++...+.|+.+...+...+.
T Consensus 141 YsiH~a~~~~f~~~~~~~~G~~v~~~~~~~~~ 172 (198)
T COG2263 141 YSIHKAGSRDFVEKFAADLGGTVTHIERARFP 172 (198)
T ss_pred EEeeccccHHHHHHHHHhcCCeEEEEEEEEEe
Confidence 45555557788889999999998888655533
No 274
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.41 E-value=1.7e-11 Score=142.08 Aligned_cols=239 Identities=10% Similarity=0.057 Sum_probs=159.8
Q ss_pred CCCCCeEEccCCCCCC--C-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQSFL--P-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~--~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..|...+|+..|.+.. + .++.+.+++.+.+..........+....+++.+..... ..+ .+++++++++++..+
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~---~~~-~v~~~~sGseA~e~A 122 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVP---SIE-MVRMVNSGTEATMSA 122 (426)
T ss_pred CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC---CCC-EEEEecCHHHHHHHH
Confidence 5678899998875432 2 67889999988887632222344556667777766542 123 799999999999988
Q ss_pred HHHhccC--CCeEEEcCCCcHHHHHHHHHc-CCE------------EEEecCCCCCCcc---cCHHHHHHHhhcC-CCcE
Q 043334 689 VLCCILE--GGTLCFPAGSNGNYVSAARFL-KAN------------IVNIPTESEVGFK---MTEKTLVTILETV-KKPW 749 (903)
Q Consensus 689 l~~l~~p--GD~Vlv~~P~y~~~~~~~~~~-G~~------------vv~v~~~~~~~f~---ld~~~L~~~l~~~-~~~~ 749 (903)
+...... ++.|+..+++|.++...+... |.. ...++ . +.+. .|++.+++.+... .+..
T Consensus 123 ik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~d~~~l~~~i~~~~~~~a 199 (426)
T PRK00062 123 IRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFA--K-HTLTAPYNDLEAVEELFEEYGDEIA 199 (426)
T ss_pred HHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccc--c-ceEEcCCCCHHHHHHHHHhCCCcEE
Confidence 8775433 578999999998875433221 110 00000 0 0000 3688888887531 1224
Q ss_pred EEEECCCCCCcccCCC-HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc
Q 043334 750 VYISGPTINPTGLLYS-NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS 828 (903)
Q Consensus 750 vil~~P~~NPTG~v~s-~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S 828 (903)
.++..|-+.-+|.+.+ .+.+++|.++|++||+++|.||+|.++.+++ .. ....++-.| | +.+||
T Consensus 200 aiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~~-------~~~~~~~~p---D----i~~~g 264 (426)
T PRK00062 200 AVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-GG-------AQGYYGVTP---D----LTTLG 264 (426)
T ss_pred EEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-cc-------HHHHhCCCc---c----hHhhh
Confidence 5555555345888876 8889999999999999999999998774432 21 111122222 1 46899
Q ss_pred hhcccccceeeEEEeCcHHHHHHHHhCC-----CCCCCcHHHHHHHHHHHh
Q 043334 829 LKMLTGALKFGFLVLNHPQLVDAFSSFP-----GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 829 K~~g~~GlRiG~lv~~~~~li~~l~~~~-----~~~~~s~~~Q~aa~~~L~ 874 (903)
|.++ .||++|+++++++ +++.+.... .+.+.+++.+.++.+.|+
T Consensus 265 K~l~-~G~p~ga~~~~~~-i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 313 (426)
T PRK00062 265 KIIG-GGLPVGAFGGRRE-IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLK 313 (426)
T ss_pred hHhh-CCCcceeeeEHHH-HHHhhccCCCceecccCcCCHHHHHHHHHHHH
Confidence 9998 8999999999877 999885321 245788899999999885
No 275
>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase. In E. coli, this protein flanks the DNA repair protein MutY, also called micA.
Probab=99.41 E-value=2.2e-12 Score=133.59 Aligned_cols=137 Identities=16% Similarity=0.184 Sum_probs=101.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
...+|||+|||+|.++..+++..|..+|+|+|+++++++.|++++...++ .+++++++|+.+..
T Consensus 16 ~~~~ilDiGcG~G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l----------------~ni~~i~~d~~~~~ 79 (194)
T TIGR00091 16 KAPLHLEIGCGKGRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGL----------------KNLHVLCGDANELL 79 (194)
T ss_pred CCceEEEeCCCccHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCC----------------CCEEEEccCHHHHH
Confidence 34689999999999999999999999999999999999999999987776 48999999998754
Q ss_pred c--CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 110 R--DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 110 ~--~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
. ...+.+|.|+.|+|-.-....+.. .. -....+++++.++|||||.++
T Consensus 80 ~~~~~~~~~d~v~~~~pdpw~k~~h~~----~r--------------------------~~~~~~l~~~~r~LkpgG~l~ 129 (194)
T TIGR00091 80 DKFFPDGSLSKVFLNFPDPWPKKRHNK----RR--------------------------ITQPHFLKEYANVLKKGGVIH 129 (194)
T ss_pred HhhCCCCceeEEEEECCCcCCCCCccc----cc--------------------------cCCHHHHHHHHHHhCCCCEEE
Confidence 2 122379999998652211111000 00 001278999999999999999
Q ss_pred EEeCCCCcHHHHHHHHHHCC-CeEEE
Q 043334 188 FNMGGRPGQGVCKRLFERRG-FRVDK 212 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~g-f~~~~ 212 (903)
+.+........+.+.+.+.+ |....
T Consensus 130 ~~td~~~~~~~~~~~~~~~~~f~~~~ 155 (194)
T TIGR00091 130 FKTDNEPLFEDMLKVLSENDLFENTS 155 (194)
T ss_pred EEeCCHHHHHHHHHHHHhCCCeEecc
Confidence 98876654444455666665 66543
No 276
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=99.41 E-value=2.8e-12 Score=138.47 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=83.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|++|++.|+++....++ .++++++++|+.+..
T Consensus 44 ~~~~vLDiGcG~G~~a~~la~~--g~~v~~vD~s~~~l~~a~~~~~~~g~---------------~~~v~~~~~d~~~l~ 106 (255)
T PRK11036 44 RPLRVLDAGGGEGQTAIKLAEL--GHQVILCDLSAEMIQRAKQAAEAKGV---------------SDNMQFIHCAAQDIA 106 (255)
T ss_pred CCCEEEEeCCCchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCC---------------ccceEEEEcCHHHHh
Confidence 5679999999999999999987 68999999999999999999987765 257999999998764
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|+++-......+ ...+++++.++|||||.+++.
T Consensus 107 ~~~~~~fD~V~~~~vl~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 107 QHLETPVDLILFHAVLEWVAD--------------------------------------PKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred hhcCCCCCEEEehhHHHhhCC--------------------------------------HHHHHHHHHHHcCCCeEEEEE
Confidence 323348999986422111000 126799999999999999864
No 277
>PLN02244 tocopherol O-methyltransferase
Probab=99.39 E-value=6.7e-12 Score=141.05 Aligned_cols=106 Identities=23% Similarity=0.273 Sum_probs=85.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.|++.|+++...+++ .+++++.++|+.+.
T Consensus 117 ~~~~~VLDiGCG~G~~~~~La~~~-g~~v~gvD~s~~~i~~a~~~~~~~g~---------------~~~v~~~~~D~~~~ 180 (340)
T PLN02244 117 KRPKRIVDVGCGIGGSSRYLARKY-GANVKGITLSPVQAARANALAAAQGL---------------SDKVSFQVADALNQ 180 (340)
T ss_pred CCCCeEEEecCCCCHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcCC---------------CCceEEEEcCcccC
Confidence 467899999999999999999976 67999999999999999999887765 35799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+... ++||+|+++--....+ ....+++++.++|||||.+++
T Consensus 181 ~~~~-~~FD~V~s~~~~~h~~--------------------------------------d~~~~l~e~~rvLkpGG~lvi 221 (340)
T PLN02244 181 PFED-GQFDLVWSMESGEHMP--------------------------------------DKRKFVQELARVAAPGGRIII 221 (340)
T ss_pred CCCC-CCccEEEECCchhccC--------------------------------------CHHHHHHHHHHHcCCCcEEEE
Confidence 5443 4899999642111100 022789999999999999998
Q ss_pred E
Q 043334 189 N 189 (903)
Q Consensus 189 ~ 189 (903)
.
T Consensus 222 ~ 222 (340)
T PLN02244 222 V 222 (340)
T ss_pred E
Confidence 4
No 278
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.39 E-value=5e-11 Score=135.42 Aligned_cols=192 Identities=14% Similarity=0.098 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcHHH
Q 043334 631 SLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNGNY 709 (903)
Q Consensus 631 ~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~~~ 709 (903)
.+.++++.+.+.....+. ..+..+.+++.+++++|.+ +.+.+++++.+|.+++.++ +++||+|++|..+|+.+
T Consensus 5 ~e~~~~v~~~l~s~~~~~-~g~~~~~fE~~~a~~~g~~-----~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~ 78 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST-YGPYVEEFEKEFAEYFGVK-----YAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPAT 78 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS-SSHHHHHHHHHHHHHHTSS-----EEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THH
T ss_pred HHHHHHHHHHHHhCCccC-CCHHHHHHHHHHHHHhCCC-----eEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHH
Confidence 345666777776654443 1345677888888888854 4555555566777777776 67999999999999999
Q ss_pred HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCC
Q 043334 710 VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAF 789 (903)
Q Consensus 710 ~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY 789 (903)
..++...|++++.+++++ ++|.+|++.+++.+++++ ++|++++.. |... ++++|.++|+++|++||+|-+.
T Consensus 79 ~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t-~ai~~~h~~----G~~~---d~~~i~~~~~~~~i~lIeD~a~ 149 (363)
T PF01041_consen 79 ASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKT-KAILVVHLF----GNPA---DMDAIRAIARKHGIPLIEDAAQ 149 (363)
T ss_dssp HHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTE-EEEEEE-GG----GB------HHHHHHHHHHTT-EEEEE-TT
T ss_pred HHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCc-cEEEEecCC----CCcc---cHHHHHHHHHHcCCcEEEcccc
Confidence 999999999999999986 578999999999999988 588888666 7776 5999999999999999999998
Q ss_pred CCC-ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccC--chhcccccceeeEEEeCcHHHHHHHHhCC
Q 043334 790 SGL-EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGL--SLKMLTGALKFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 790 ~~l-~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~--SK~~g~~GlRiG~lv~~~~~li~~l~~~~ 856 (903)
+.. .|.+... .. ...+.+.|| +|.+. .-.-|+++++++++.++++.+.
T Consensus 150 a~g~~~~g~~~------------G~-----~gd~~~fSf~~~K~i~--~geGG~v~~~~~~~~~~~~~~~ 200 (363)
T PF01041_consen 150 AFGARYKGRPV------------GS-----FGDIAIFSFHPTKIIT--TGEGGAVVTNDPELAERARALR 200 (363)
T ss_dssp TTT-EETTEET------------TS-----SSSEEEEESSTTSSS---SSS-EEEEESTHHHHHHHHHHT
T ss_pred ccCceeCCEec------------cC-----CCCceEecCCCCCCCc--CCCCeeEEecHHHHHHHhhhhh
Confidence 643 2333221 11 235677777 68774 3345999999887888887654
No 279
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional
Probab=99.39 E-value=3.5e-12 Score=155.82 Aligned_cols=144 Identities=16% Similarity=0.144 Sum_probs=110.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||||.+++.++.. +..+|+++|+|+.+++.|++|+..|+++ .++++++++|+.++.
T Consensus 538 ~g~rVLDlf~gtG~~sl~aa~~-Ga~~V~~vD~s~~al~~a~~N~~~ng~~--------------~~~v~~i~~D~~~~l 602 (702)
T PRK11783 538 KGKDFLNLFAYTGTASVHAALG-GAKSTTTVDMSNTYLEWAERNFALNGLS--------------GRQHRLIQADCLAWL 602 (702)
T ss_pred CCCeEEEcCCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCC--------------ccceEEEEccHHHHH
Confidence 4789999999999999998875 4457999999999999999999999872 147999999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+||+||||+..... +.. . ..+...+..++..+.++|+|||.+++.
T Consensus 603 ~~~~~~fDlIilDPP~f~~~~~--~~~-~------------------------~~~~~~y~~l~~~a~~lL~~gG~l~~~ 655 (702)
T PRK11783 603 KEAREQFDLIFIDPPTFSNSKR--MED-S------------------------FDVQRDHVALIKDAKRLLRPGGTLYFS 655 (702)
T ss_pred HHcCCCcCEEEECCCCCCCCCc--cch-h------------------------hhHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3323489999999999964321 000 0 011233568899999999999999997
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
......... .+.+.+.|+....+...
T Consensus 656 ~~~~~~~~~-~~~~~~~g~~~~~i~~~ 681 (702)
T PRK11783 656 NNKRGFKMD-EEGLAKLGLKAEEITAK 681 (702)
T ss_pred eCCccCChh-HHHHHhCCCeEEEEecC
Confidence 776544433 56788889988777443
No 280
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.39 E-value=1.2e-11 Score=143.01 Aligned_cols=157 Identities=8% Similarity=0.055 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~ 727 (903)
+..+++++.+++..|.. ..++++++++++.+++.+++++||+|+++...|+.....+ ...|++++.++.+
T Consensus 64 p~~~~le~~lA~l~g~~-----~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 137 (433)
T PRK08134 64 PTVAVLEERVAALEGGV-----GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG- 137 (433)
T ss_pred hHHHHHHHHHHHHhCCC-----cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-
Confidence 45677888888887754 3577888899999888888999999999999998765544 4589999999863
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
|++++++++++++ ++|++.+|+ ||||.+.+ +++|.++|+++|+++|+|.++..-.. .. +
T Consensus 138 ------d~~~l~~~i~~~T-klV~~e~~~-np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~-~~--------p- 196 (433)
T PRK08134 138 ------DIDGWRAAIRPNT-RLLFGETLG-NPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL-LR--------P- 196 (433)
T ss_pred ------CHHHHHHhcCCCC-eEEEEECCC-cccCcccC---HHHHHHHHHHcCCEEEEECCCccccc-CC--------c-
Confidence 6899999999888 499999998 99999998 88899999999999999999842111 11 1
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
+. . +..+++.|.+|.++.+|..+|.+++
T Consensus 197 l~----~----GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 197 FE----H----GADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred hh----c----CCCEEEeccccccCCCCCceEEEEE
Confidence 11 1 3578999999999988888887765
No 281
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=99.38 E-value=8e-12 Score=129.67 Aligned_cols=127 Identities=22% Similarity=0.229 Sum_probs=94.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.++++...+++ .++++.++|+.+..
T Consensus 30 ~~~~vLDiGcG~G~~a~~La~~--g~~V~gvD~S~~~i~~a~~~~~~~~~----------------~~v~~~~~d~~~~~ 91 (197)
T PRK11207 30 KPGKTLDLGCGNGRNSLYLAAN--GFDVTAWDKNPMSIANLERIKAAENL----------------DNLHTAVVDLNNLT 91 (197)
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCC----------------CcceEEecChhhCC
Confidence 4689999999999999999987 68999999999999999999887765 36889999998764
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.. ++||+|+++-.++..+ .+....+++++.++|||||.+++.
T Consensus 92 ~~--~~fD~I~~~~~~~~~~------------------------------------~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 92 FD--GEYDFILSTVVLMFLE------------------------------------AKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred cC--CCcCEEEEecchhhCC------------------------------------HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 43 3799999764432111 011337899999999999996552
Q ss_pred eC-------------CCCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MG-------------GRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~-------------~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.. .......+.+.++ ||++.+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~el~~~~~--~~~~~~~~ 169 (197)
T PRK11207 134 AAMDTADYPCTVGFPFAFKEGELRRYYE--GWEMVKYN 169 (197)
T ss_pred EEecCCCCCCCCCCCCccCHHHHHHHhC--CCeEEEee
Confidence 11 1124455566665 78877663
No 282
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=99.38 E-value=6.4e-12 Score=135.70 Aligned_cols=100 Identities=18% Similarity=0.313 Sum_probs=81.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.|++.|+++ +++++++|+.++
T Consensus 28 ~~~~~vLDlGcG~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~-----------------------~~~~~~~d~~~~ 84 (255)
T PRK14103 28 ERARRVVDLGCGPGNLTRYLARRWPGAVIEALDSSPEMVAAARER-----------------------GVDARTGDVRDW 84 (255)
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhc-----------------------CCcEEEcChhhC
Confidence 356899999999999999999998888999999999999999752 467899999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... ++||+|++|..+...++ ...++++++++|||||.+++
T Consensus 85 ~~~--~~fD~v~~~~~l~~~~d--------------------------------------~~~~l~~~~~~LkpgG~l~~ 124 (255)
T PRK14103 85 KPK--PDTDVVVSNAALQWVPE--------------------------------------HADLLVRWVDELAPGSWIAV 124 (255)
T ss_pred CCC--CCceEEEEehhhhhCCC--------------------------------------HHHHHHHHHHhCCCCcEEEE
Confidence 432 38999998765543221 12679999999999999998
Q ss_pred EeC
Q 043334 189 NMG 191 (903)
Q Consensus 189 ~~~ 191 (903)
.+.
T Consensus 125 ~~~ 127 (255)
T PRK14103 125 QVP 127 (255)
T ss_pred EcC
Confidence 654
No 283
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=99.37 E-value=1.1e-11 Score=137.91 Aligned_cols=127 Identities=21% Similarity=0.207 Sum_probs=97.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++..++.+|+|+|+|++|++.|+++... .+++++.+|+.+..
T Consensus 113 ~~~~VLDLGcGtG~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~-------------------~~i~~i~gD~e~lp 173 (340)
T PLN02490 113 RNLKVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-------------------KECKIIEGDAEDLP 173 (340)
T ss_pred CCCEEEEEecCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhc-------------------cCCeEEeccHHhCC
Confidence 56799999999999999999888778999999999999999987531 35788999998865
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|++|......++ ..++++++.++|||||.+++.
T Consensus 174 ~~~-~sFDvVIs~~~L~~~~d--------------------------------------~~~~L~e~~rvLkPGG~LvIi 214 (340)
T PLN02490 174 FPT-DYADRYVSAGSIEYWPD--------------------------------------PQRGIKEAYRVLKIGGKACLI 214 (340)
T ss_pred CCC-CceeEEEEcChhhhCCC--------------------------------------HHHHHHHHHHhcCCCcEEEEE
Confidence 443 38999997533322111 126799999999999998874
Q ss_pred eCC----------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MGG----------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~~----------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... ....+.+.+++++.||+.++..
T Consensus 215 ~~~~p~~~~~r~~~~~~~~~~t~eEl~~lL~~aGF~~V~i~ 255 (340)
T PLN02490 215 GPVHPTFWLSRFFADVWMLFPKEEEYIEWFTKAGFKDVKLK 255 (340)
T ss_pred EecCcchhHHHHhhhhhccCCCHHHHHHHHHHCCCeEEEEE
Confidence 211 1245666789999999987763
No 284
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=99.37 E-value=1e-11 Score=137.51 Aligned_cols=133 Identities=12% Similarity=0.247 Sum_probs=101.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|++++|++.|+++....+. ..+++++++|+.++
T Consensus 130 ~~g~~ILDIGCG~G~~s~~La~~--g~~V~GID~s~~~i~~Ar~~~~~~~~---------------~~~i~~~~~dae~l 192 (322)
T PLN02396 130 FEGLKFIDIGCGGGLLSEPLARM--GATVTGVDAVDKNVKIARLHADMDPV---------------TSTIEYLCTTAEKL 192 (322)
T ss_pred CCCCEEEEeeCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCc---------------ccceeEEecCHHHh
Confidence 46789999999999999999875 78999999999999999988755443 24799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... .++||+|++. ++.+|..+ ...+++++.++|||||.+++
T Consensus 193 ~~~-~~~FD~Vi~~--------------~vLeHv~d------------------------~~~~L~~l~r~LkPGG~lii 233 (322)
T PLN02396 193 ADE-GRKFDAVLSL--------------EVIEHVAN------------------------PAEFCKSLSALTIPNGATVL 233 (322)
T ss_pred hhc-cCCCCEEEEh--------------hHHHhcCC------------------------HHHHHHHHHHHcCCCcEEEE
Confidence 543 3489999852 11222111 23789999999999999998
Q ss_pred EeCC-----------------------------CCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 189 NMGG-----------------------------RPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 189 ~~~~-----------------------------~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
.... ......+.+++++.||++.++.+..
T Consensus 234 st~nr~~~~~~~~i~~~eyi~~~lp~gth~~~~f~tp~eL~~lL~~aGf~i~~~~G~~ 291 (322)
T PLN02396 234 STINRTMRAYASTIVGAEYILRWLPKGTHQWSSFVTPEELSMILQRASVDVKEMAGFV 291 (322)
T ss_pred EECCcCHHHHHHhhhhHHHHHhcCCCCCcCccCCCCHHHHHHHHHHcCCeEEEEeeeE
Confidence 5311 1245677889999999998875444
No 285
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=99.37 E-value=7.7e-12 Score=134.63 Aligned_cols=121 Identities=28% Similarity=0.421 Sum_probs=93.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.+++.+++. +..+|+|+|+|+.+++.|++|+..++++ +++.+..+|.
T Consensus 118 ~~~~~VLDiGcGsG~l~i~~~~~-g~~~v~giDis~~~l~~A~~n~~~~~~~---------------~~~~~~~~~~--- 178 (250)
T PRK00517 118 LPGKTVLDVGCGSGILAIAAAKL-GAKKVLAVDIDPQAVEAARENAELNGVE---------------LNVYLPQGDL--- 178 (250)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCC---------------ceEEEccCCC---
Confidence 36889999999999999987764 4457999999999999999999888762 3455544432
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+||+|++|... +.+..+++++.++|||||.+++
T Consensus 179 ------~fD~Vvani~~-----------------------------------------~~~~~l~~~~~~~LkpgG~lil 211 (250)
T PRK00517 179 ------KADVIVANILA-----------------------------------------NPLLELAPDLARLLKPGGRLIL 211 (250)
T ss_pred ------CcCEEEEcCcH-----------------------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 69999987310 0123678999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
..........+.+.+++.||.+.....
T Consensus 212 sgi~~~~~~~v~~~l~~~Gf~~~~~~~ 238 (250)
T PRK00517 212 SGILEEQADEVLEAYEEAGFTLDEVLE 238 (250)
T ss_pred EECcHhhHHHHHHHHHHCCCEEEEEEE
Confidence 755555566667889999999887643
No 286
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.36 E-value=9.9e-11 Score=136.77 Aligned_cols=269 Identities=10% Similarity=0.059 Sum_probs=168.4
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCC---CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMS---ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~---~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...||+..|. ..++ ..+.+.+++.+.+...... ....+....+++.+.+....... + .++++++++++
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~-~-~v~f~~sGseA 127 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFD-K-KVLFLNSGAEA 127 (451)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCC-C-EEEEcCCcHHH
Confidence 45677889986663 3333 4777889988887764221 11245567778888776432221 2 79999999998
Q ss_pred HHHHHHHhcc-CC-CeEEEcCCCcHHHHHHH-HHcCC-------------EEEEecCCCC--CCcccC--------HHHH
Q 043334 685 FNKLVLCCIL-EG-GTLCFPAGSNGNYVSAA-RFLKA-------------NIVNIPTESE--VGFKMT--------EKTL 738 (903)
Q Consensus 685 l~~ll~~l~~-pG-D~Vlv~~P~y~~~~~~~-~~~G~-------------~vv~v~~~~~--~~f~ld--------~~~L 738 (903)
...++..-.. .| ..|+....+|-+....+ ...|. .+..+|.... ...... .+.+
T Consensus 128 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (451)
T PRK06918 128 VENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEF 207 (451)
T ss_pred HHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHH
Confidence 8877764421 22 45777676665543322 22221 1122221100 000010 1233
Q ss_pred HHHhh----cCCCcEEEEECCCCCCc-ccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhc
Q 043334 739 VTILE----TVKKPWVYISGPTINPT-GLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLY 812 (903)
Q Consensus 739 ~~~l~----~~~~~~vil~~P~~NPT-G~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~ 812 (903)
++.+. +.. .+.+|.-|- +.. |.++ +.+.+++|.++|++||+++|+||+|.++.+.+... + ...++
T Consensus 208 ~~~~~~~~~~~~-iAavi~EPi-~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~---a----~~~~~ 278 (451)
T PRK06918 208 KNFFISEVAPET-IAAVVMEPV-QGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYF---A----IEHFD 278 (451)
T ss_pred HHHHHhhcCCCc-eEEEEECcc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCcee---h----hHhcC
Confidence 33331 223 477778887 555 5544 55669999999999999999999999887766432 1 22232
Q ss_pred cCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHH
Q 043334 813 SSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEH 890 (903)
Q Consensus 813 ~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~ 890 (903)
..| + +.||||.++ +|+|+||++++++ +++.+.... .+.+.+.+.|.++.+.|+.-.. +.+.++++.+
T Consensus 279 v~p---D----i~t~sK~l~-~G~pig~v~~~~~-i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~--~~~~~~~~~~ 347 (451)
T PRK06918 279 VVP---D----LITVSKSLG-AGVPISGVIGRKE-IMDESAPGELGGTYAGSPLGCAAALAVLDIIEK--ENLNDRAIEL 347 (451)
T ss_pred CCC---C----EEeeehhhc-CCCccEEEEEcHH-HHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHH--CCHHHHHHHH
Confidence 222 2 458999998 9999999999987 888876433 2778899999998888742211 2456778888
Q ss_pred HHHHHHHHHHH
Q 043334 891 IRNLESRSKRL 901 (903)
Q Consensus 891 r~~y~~Rr~~l 901 (903)
.+.++++.+.+
T Consensus 348 g~~l~~~l~~l 358 (451)
T PRK06918 348 GKVVMNRFEEM 358 (451)
T ss_pred HHHHHHHHHHH
Confidence 88888877765
No 287
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.36 E-value=9.2e-11 Score=135.04 Aligned_cols=235 Identities=11% Similarity=0.089 Sum_probs=153.8
Q ss_pred CCCCCeEEccCCCCCCC---CcHHHHHHHHHHHHccCCCC--CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLP---IPSLVKAAIFESFARQNMSE--SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~---~p~~v~~al~~al~~y~~~~--G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..|..... ..+.+.+++.+.+.++.... ...+....+++.+.+.+|. + .++++++++++..
T Consensus 34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~---~~~~~~SGs~A~e 108 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGY--D---KVLPMNTGAEAVE 108 (401)
T ss_pred CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCC--C---EEEEeCccHHHHH
Confidence 46777899977643333 37889999988877644221 1345567788888887763 2 5777777777777
Q ss_pred HHHHHhc---------cCC-CeEEEcCCCcHH-HHHHHHHcCC------------EEEEecCCCCCCcccCHHHHHHHhh
Q 043334 687 KLVLCCI---------LEG-GTLCFPAGSNGN-YVSAARFLKA------------NIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 687 ~ll~~l~---------~pG-D~Vlv~~P~y~~-~~~~~~~~G~------------~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
.++.... .+| +.|+...-+|.. ........|- .+..++. .|++.+++.++
T Consensus 109 ~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~ 181 (401)
T TIGR01885 109 TAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALE 181 (401)
T ss_pred HHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHHHHH
Confidence 7777642 233 467767766654 2333333221 1222222 26888988885
Q ss_pred cC--CCcEEEEECCCCCCcccCCCH-HHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc
Q 043334 744 TV--KKPWVYISGPTINPTGLLYSN-KEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN 820 (903)
Q Consensus 744 ~~--~~~~vil~~P~~NPTG~v~s~-eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~ 820 (903)
.. ...+|++..+ +|++|.+.+. +.+++|.++|++||+++|+||+|.++.+.|... . .. ..+.. ..
T Consensus 182 ~~~~~~~avi~E~v-~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~---~----~~-~~~~~---~d 249 (401)
T TIGR01885 182 DHGPNVCAFIVEPI-QGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL---C----VD-HENVK---PD 249 (401)
T ss_pred hcCCCEEEEEEeCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh---H----Hh-hcCCC---CC
Confidence 32 2235555555 5999999964 469999999999999999999997765545431 1 11 11111 12
Q ss_pred eEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 821 VSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 821 vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
++ ++||.++..|+|+||++++++ +++.+..... ..+.+++.|.++.++|+
T Consensus 250 i~---~~gK~l~~g~~~ig~v~~~~~-i~~~~~~~~~~~t~~~~p~~~~aa~a~L~ 301 (401)
T TIGR01885 250 IV---LLGKALSGGVYPVSAVLADDD-VMLTIKPGEHGSTYGGNPLACAVAVAALE 301 (401)
T ss_pred EE---EeeccccCCCCCcEEEEEcHH-HHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 33 468999877799999999877 8888765222 55667888999988885
No 288
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=99.36 E-value=1.2e-11 Score=123.86 Aligned_cols=126 Identities=20% Similarity=0.172 Sum_probs=107.0
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+++|+|||||.+++.++...|..+||++|-++++++..++|++..|. +|++++.||.-+.
T Consensus 33 ~~g~~l~DIGaGtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~----------------~n~~vv~g~Ap~~ 96 (187)
T COG2242 33 RPGDRLWDIGAGTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGV----------------DNLEVVEGDAPEA 96 (187)
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCC----------------CcEEEEeccchHh
Confidence 467899999999999999999888899999999999999999999999987 6999999999888
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+.+.. ++|.|+- - +. ..+..+++.+...|||||+++.
T Consensus 97 L~~~~-~~daiFI-----G----------------------------------Gg---~~i~~ile~~~~~l~~ggrlV~ 133 (187)
T COG2242 97 LPDLP-SPDAIFI-----G----------------------------------GG---GNIEEILEAAWERLKPGGRLVA 133 (187)
T ss_pred hcCCC-CCCEEEE-----C----------------------------------CC---CCHHHHHHHHHHHcCcCCeEEE
Confidence 76554 7999971 1 11 2244789999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCC-eEEEE
Q 043334 189 NMGGRPGQGVCKRLFERRGF-RVDKL 213 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf-~~~~~ 213 (903)
+.-.........+.+++.|+ +++++
T Consensus 134 naitlE~~~~a~~~~~~~g~~ei~~v 159 (187)
T COG2242 134 NAITLETLAKALEALEQLGGREIVQV 159 (187)
T ss_pred EeecHHHHHHHHHHHHHcCCceEEEE
Confidence 88877777777789999999 55554
No 289
>PLN02624 ornithine-delta-aminotransferase
Probab=99.36 E-value=9.5e-11 Score=137.53 Aligned_cols=267 Identities=12% Similarity=0.088 Sum_probs=164.2
Q ss_pred cCCCCCeEEccCCCCCCC---CcHHHHHHHHHHHHccCCCC--CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 611 ETPNSGLIHMDVDQSFLP---IPSLVKAAIFESFARQNMSE--SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 611 ~~~~~~~IdLs~g~p~~~---~p~~v~~al~~al~~y~~~~--G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
...|...+|+..|.-... ..+.+.+++.+.+.++.... -..+....+++.+.+..|. + .++++++++++.
T Consensus 71 d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~--~---~~~f~~SGseA~ 145 (474)
T PLN02624 71 DPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGY--D---MVLPMNTGAEGV 145 (474)
T ss_pred ECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCC--C---eEEEeCChHHHH
Confidence 346778889876643322 37889999999887643221 1234456677777776652 2 677778777888
Q ss_pred HHHHHHhcc--------C-CC-eEEEcCCCcHHHHHHHHHcCCEEE-E---ecCCCC---CCcccCHHHHHHHhhcC--C
Q 043334 686 NKLVLCCIL--------E-GG-TLCFPAGSNGNYVSAARFLKANIV-N---IPTESE---VGFKMTEKTLVTILETV--K 746 (903)
Q Consensus 686 ~~ll~~l~~--------p-GD-~Vlv~~P~y~~~~~~~~~~G~~vv-~---v~~~~~---~~f~ld~~~L~~~l~~~--~ 746 (903)
..++..... + |. .|+...-+|-+....+.....+.. . -|..+. -.| .|++.+++.++.. .
T Consensus 146 e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~ 224 (474)
T PLN02624 146 ETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEEDGDR 224 (474)
T ss_pred HHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhCCCC
Confidence 777754332 1 33 466666555543222211111110 0 011000 001 2678888888632 2
Q ss_pred CcEEEEECCCCCCcccCCCHH-HHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEc
Q 043334 747 KPWVYISGPTINPTGLLYSNK-EIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLG 825 (903)
Q Consensus 747 ~~~vil~~P~~NPTG~v~s~e-el~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~ 825 (903)
..+|++..++ ||+|.+++.+ .+++|.++|++||+++|.||+|.++-..|... . .....-.+ . +-
T Consensus 225 iaaiiiEpv~-~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~---a----~~~~~i~p----D---iv 289 (474)
T PLN02624 225 IAAFLFEPIQ-GEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML---A----CDWEEVRP----D---VV 289 (474)
T ss_pred EEEEEECCcc-CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh---h----HHhcCCCC----C---EE
Confidence 3466666665 9999998877 49999999999999999999998765544321 1 11111111 1 33
Q ss_pred cCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 826 GLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 826 S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
+|||.+|.+++++|+++++++ +++.+.... .+.+.+++.+.++.+.|+.-.. ..+.++..++.+.++++.+.+
T Consensus 290 ~lsK~lggG~~pigav~~~~~-i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~--~~l~~~~~~~~~~l~~~L~~l 364 (474)
T PLN02624 290 ILGKALGGGVIPVSAVLADKD-VMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD--EKLAERSAKLGQELRDQLQKI 364 (474)
T ss_pred EecccccCCCCcceeeeecHH-HHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHH
Confidence 368999987799999999876 888776443 2557788999999999852111 234445566666666665543
No 290
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=99.36 E-value=8.7e-12 Score=129.15 Aligned_cols=125 Identities=14% Similarity=0.171 Sum_probs=92.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.|++.+++++..+++ ++.+..+|+....
T Consensus 30 ~~~~vLDiGcG~G~~a~~la~~--g~~V~~iD~s~~~l~~a~~~~~~~~~-----------------~v~~~~~d~~~~~ 90 (195)
T TIGR00477 30 APCKTLDLGCGQGRNSLYLSLA--GYDVRAWDHNPASIASVLDMKARENL-----------------PLRTDAYDINAAA 90 (195)
T ss_pred CCCcEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHhCC-----------------CceeEeccchhcc
Confidence 4579999999999999999986 68999999999999999998877665 3777788876554
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.+ ++||+|+++.++...+. +....+++++.++|||||.+++.
T Consensus 91 ~~--~~fD~I~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 91 LN--EDYDFIFSTVVFMFLQA------------------------------------GRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred cc--CCCCEEEEecccccCCH------------------------------------HHHHHHHHHHHHHhCCCcEEEEE
Confidence 33 37999998876653211 11237799999999999996653
Q ss_pred eC-------------CCCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MG-------------GRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~-------------~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.. .......++++++ +|.+...
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~el~~~f~--~~~~~~~ 167 (195)
T TIGR00477 133 AAMDTADYPCHMPFSFTFKEDELRQYYA--DWELLKY 167 (195)
T ss_pred EecccCCCCCCCCcCccCCHHHHHHHhC--CCeEEEe
Confidence 21 1234455555664 4777665
No 291
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=99.36 E-value=9.1e-12 Score=129.35 Aligned_cols=127 Identities=17% Similarity=0.244 Sum_probs=98.7
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
+.++.+|||+|||+|.+++.+++.. ++.+|+++|+++++++.|++|+..+++ .+++.++.+|..
T Consensus 38 ~~~~~~vlDlG~GtG~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~---------------~~~v~~~~~d~~ 102 (198)
T PRK00377 38 LRKGDMILDIGCGTGSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGV---------------LNNIVLIKGEAP 102 (198)
T ss_pred CCCcCEEEEeCCcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCC---------------CCCeEEEEechh
Confidence 4577899999999999999998865 356999999999999999999988874 257999999997
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+......++||+|+.+... ..+..+++.+.+.|||||.+
T Consensus 103 ~~l~~~~~~~D~V~~~~~~-----------------------------------------~~~~~~l~~~~~~LkpgG~l 141 (198)
T PRK00377 103 EILFTINEKFDRIFIGGGS-----------------------------------------EKLKEIISASWEIIKKGGRI 141 (198)
T ss_pred hhHhhcCCCCCEEEECCCc-----------------------------------------ccHHHHHHHHHHHcCCCcEE
Confidence 7543333489999864210 01236799999999999999
Q ss_pred EEEeCCCCcHHHHHHHHHHCCCeE
Q 043334 187 IFNMGGRPGQGVCKRLFERRGFRV 210 (903)
Q Consensus 187 l~~~~~~~~~~~l~~ll~~~gf~~ 210 (903)
++..............+++.||..
T Consensus 142 v~~~~~~~~~~~~~~~l~~~g~~~ 165 (198)
T PRK00377 142 VIDAILLETVNNALSALENIGFNL 165 (198)
T ss_pred EEEeecHHHHHHHHHHHHHcCCCe
Confidence 986655445556667889999843
No 292
>TIGR00740 methyltransferase, putative. A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily.
Probab=99.35 E-value=4.5e-12 Score=135.50 Aligned_cols=108 Identities=14% Similarity=0.157 Sum_probs=83.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKW--LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~--~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
++.+|||+|||+|..+..+++.+ |+.+|+|+|+|+.|++.|++++...+. ..+++++++|+.+
T Consensus 53 ~~~~iLDlGcG~G~~~~~l~~~~~~p~~~v~gvD~s~~ml~~a~~~~~~~~~---------------~~~v~~~~~d~~~ 117 (239)
T TIGR00740 53 PDSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHS---------------EIPVEILCNDIRH 117 (239)
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCC---------------CCCeEEEECChhh
Confidence 56799999999999999999874 678999999999999999999865543 2479999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
...+ .+|+|+++-.... +.. .....++++++++|||||.++
T Consensus 118 ~~~~---~~d~v~~~~~l~~------~~~------------------------------~~~~~~l~~i~~~LkpgG~l~ 158 (239)
T TIGR00740 118 VEIK---NASMVILNFTLQF------LPP------------------------------EDRIALLTKIYEGLNPNGVLV 158 (239)
T ss_pred CCCC---CCCEEeeecchhh------CCH------------------------------HHHHHHHHHHHHhcCCCeEEE
Confidence 7543 5898886432221 100 112378999999999999999
Q ss_pred EEeC
Q 043334 188 FNMG 191 (903)
Q Consensus 188 ~~~~ 191 (903)
+...
T Consensus 159 i~d~ 162 (239)
T TIGR00740 159 LSEK 162 (239)
T ss_pred Eeec
Confidence 8643
No 293
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=99.35 E-value=5e-12 Score=135.85 Aligned_cols=106 Identities=15% Similarity=0.196 Sum_probs=84.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHH--hCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEK--WLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~--~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
++.+|||+|||+|..+..+++. .++.+|+|+|+|+.|++.|++++..++. ..+++++++|+.+
T Consensus 56 ~~~~vLDlGcGtG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~---------------~~~v~~~~~d~~~ 120 (247)
T PRK15451 56 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA---------------PTPVDVIEGDIRD 120 (247)
T ss_pred CCCEEEEEcccCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCC---------------CCCeEEEeCChhh
Confidence 5789999999999999998874 4778999999999999999999977665 2579999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.+.. .+|+|++|......++ +....+++++++.|||||.++
T Consensus 121 ~~~~---~~D~vv~~~~l~~l~~------------------------------------~~~~~~l~~i~~~LkpGG~l~ 161 (247)
T PRK15451 121 IAIE---NASMVVLNFTLQFLEP------------------------------------SERQALLDKIYQGLNPGGALV 161 (247)
T ss_pred CCCC---CCCEEehhhHHHhCCH------------------------------------HHHHHHHHHHHHhcCCCCEEE
Confidence 7543 5899987643332110 112378999999999999999
Q ss_pred EE
Q 043334 188 FN 189 (903)
Q Consensus 188 ~~ 189 (903)
+.
T Consensus 162 l~ 163 (247)
T PRK15451 162 LS 163 (247)
T ss_pred EE
Confidence 84
No 294
>TIGR03438 probable methyltransferase. This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases
Probab=99.35 E-value=3e-12 Score=141.50 Aligned_cols=119 Identities=14% Similarity=0.065 Sum_probs=82.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||||..+..+++.++ +.+|+|+|+|++|++.|++++....- ..++.++++|+.+.
T Consensus 63 ~~~~iLELGcGtG~~t~~Ll~~l~~~~~~~~iDiS~~mL~~a~~~l~~~~p---------------~~~v~~i~gD~~~~ 127 (301)
T TIGR03438 63 AGCELVELGSGSSRKTRLLLDALRQPARYVPIDISADALKESAAALAADYP---------------QLEVHGICADFTQP 127 (301)
T ss_pred CCCeEEecCCCcchhHHHHHHhhccCCeEEEEECCHHHHHHHHHHHHhhCC---------------CceEEEEEEcccch
Confidence 568999999999999999999876 58999999999999999998754321 12578899999874
Q ss_pred ccCCCCce---eEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 109 CRDHDIQL---ERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 109 ~~~~~~~f---D~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
..... .+ +.+++ +.......+ ..+...+++++++++|+|||.
T Consensus 128 ~~~~~-~~~~~~~~~~----~~gs~~~~~------------------------------~~~e~~~~L~~i~~~L~pgG~ 172 (301)
T TIGR03438 128 LALPP-EPAAGRRLGF----FPGSTIGNF------------------------------TPEEAVAFLRRIRQLLGPGGG 172 (301)
T ss_pred hhhhc-ccccCCeEEE----EecccccCC------------------------------CHHHHHHHHHHHHHhcCCCCE
Confidence 32111 22 23221 111111111 112234889999999999999
Q ss_pred EEEEeCCCCcHHH
Q 043334 186 MIFNMGGRPGQGV 198 (903)
Q Consensus 186 ll~~~~~~~~~~~ 198 (903)
+++.+........
T Consensus 173 ~lig~d~~~~~~~ 185 (301)
T TIGR03438 173 LLIGVDLVKDPAV 185 (301)
T ss_pred EEEeccCCCCHHH
Confidence 9997766554443
No 295
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=99.35 E-value=1.7e-11 Score=133.53 Aligned_cols=132 Identities=22% Similarity=0.297 Sum_probs=99.6
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
+.++.+|||+|||+|..++.+++..+ ..+|+|+|+++.|++.|++|....++ ++++++++|+.
T Consensus 75 ~~~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~----------------~~v~~~~~d~~ 138 (272)
T PRK11873 75 LKPGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGY----------------TNVEFRLGEIE 138 (272)
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCC----------------CCEEEEEcchh
Confidence 34788999999999999888877654 35899999999999999999887765 47999999998
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
++.... ++||+|++|..+...++ ...++++++++|||||++
T Consensus 139 ~l~~~~-~~fD~Vi~~~v~~~~~d--------------------------------------~~~~l~~~~r~LkpGG~l 179 (272)
T PRK11873 139 ALPVAD-NSVDVIISNCVINLSPD--------------------------------------KERVFKEAFRVLKPGGRF 179 (272)
T ss_pred hCCCCC-CceeEEEEcCcccCCCC--------------------------------------HHHHHHHHHHHcCCCcEE
Confidence 865433 38999998743332111 126799999999999999
Q ss_pred EEEeC----------------------CCCcHHHHHHHHHHCCCeEEEEE
Q 043334 187 IFNMG----------------------GRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 187 l~~~~----------------------~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
++... .......+.+++++.||..+++.
T Consensus 180 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i~ 229 (272)
T PRK11873 180 AISDVVLRGELPEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITIQ 229 (272)
T ss_pred EEEEeeccCCCCHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEEE
Confidence 98311 11233455678888888877663
No 296
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=99.35 E-value=6.2e-12 Score=126.84 Aligned_cols=109 Identities=19% Similarity=0.361 Sum_probs=90.0
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
....+|.|+|||+|..+..|++++|++.++|+|-|++|++.|++.+ ++++|.++|+.++
T Consensus 29 ~~~~~v~DLGCGpGnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rl---------------------p~~~f~~aDl~~w 87 (257)
T COG4106 29 ERPRRVVDLGCGPGNSTELLARRWPDAVITGIDSSPAMLAKAAQRL---------------------PDATFEEADLRTW 87 (257)
T ss_pred cccceeeecCCCCCHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhC---------------------CCCceecccHhhc
Confidence 3457899999999999999999999999999999999999998765 6899999999999
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.++. ++|++++|--+.-.++ +-.+|......|.|||.+.+
T Consensus 88 ~p~~--~~dllfaNAvlqWlpd--------------------------------------H~~ll~rL~~~L~Pgg~LAV 127 (257)
T COG4106 88 KPEQ--PTDLLFANAVLQWLPD--------------------------------------HPELLPRLVSQLAPGGVLAV 127 (257)
T ss_pred CCCC--ccchhhhhhhhhhccc--------------------------------------cHHHHHHHHHhhCCCceEEE
Confidence 8765 7999987633321111 23678888899999999999
Q ss_pred EeCCCCcHHH
Q 043334 189 NMGGRPGQGV 198 (903)
Q Consensus 189 ~~~~~~~~~~ 198 (903)
.++.......
T Consensus 128 QmPdN~deps 137 (257)
T COG4106 128 QMPDNLDEPS 137 (257)
T ss_pred ECCCccCchh
Confidence 9987665443
No 297
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=99.34 E-value=5.5e-12 Score=137.54 Aligned_cols=124 Identities=23% Similarity=0.350 Sum_probs=89.6
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++++|||+|||||.++++.++ ++..+|+|+|+||.+++.|++|+..|+++ +++.+. ...+.
T Consensus 160 ~~g~~vLDvG~GSGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~---------------~~~~v~--~~~~~ 221 (295)
T PF06325_consen 160 KPGKRVLDVGCGSGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVE---------------DRIEVS--LSEDL 221 (295)
T ss_dssp STTSEEEEES-TTSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-T---------------TCEEES--CTSCT
T ss_pred cCCCEEEEeCCcHHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCC---------------eeEEEE--Eeccc
Confidence 3678999999999999999776 45679999999999999999999999983 455543 22222
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. .++||+|++| +... .+..+.....++|+|||.+++
T Consensus 222 ~---~~~~dlvvAN-----------I~~~------------------------------vL~~l~~~~~~~l~~~G~lIl 257 (295)
T PF06325_consen 222 V---EGKFDLVVAN-----------ILAD------------------------------VLLELAPDIASLLKPGGYLIL 257 (295)
T ss_dssp C---CS-EEEEEEE-----------S-HH------------------------------HHHHHHHHCHHHEEEEEEEEE
T ss_pred c---cccCCEEEEC-----------CCHH------------------------------HHHHHHHHHHHhhCCCCEEEE
Confidence 1 1489999987 2111 133678888999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.--.......+.+.+++ ||+..+...
T Consensus 258 SGIl~~~~~~v~~a~~~-g~~~~~~~~ 283 (295)
T PF06325_consen 258 SGILEEQEDEVIEAYKQ-GFELVEERE 283 (295)
T ss_dssp EEEEGGGHHHHHHHHHT-TEEEEEEEE
T ss_pred ccccHHHHHHHHHHHHC-CCEEEEEEE
Confidence 53333445555667766 999877643
No 298
>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional
Probab=99.34 E-value=2.3e-11 Score=138.52 Aligned_cols=130 Identities=20% Similarity=0.234 Sum_probs=95.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||||.+++.++. .+..+|+++|+|+.+++.|++|+..|+++ .++++++++|+.++.
T Consensus 220 ~g~rVLDlfsgtG~~~l~aa~-~ga~~V~~VD~s~~al~~a~~N~~~Ngl~--------------~~~v~~i~~D~~~~l 284 (396)
T PRK15128 220 ENKRVLNCFSYTGGFAVSALM-GGCSQVVSVDTSQEALDIARQNVELNKLD--------------LSKAEFVRDDVFKLL 284 (396)
T ss_pred CCCeEEEeccCCCHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC--------------CCcEEEEEccHHHHH
Confidence 578999999999999988664 34569999999999999999999999872 137999999998875
Q ss_pred cC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 110 RD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 110 ~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
.. ..++||+||+||||+.... ..+. .+...+..+++.+.++|+|||.+
T Consensus 285 ~~~~~~~~~fDlVilDPP~f~~~k-~~l~----------------------------~~~~~y~~l~~~a~~lLk~gG~l 335 (396)
T PRK15128 285 RTYRDRGEKFDVIVMDPPKFVENK-SQLM----------------------------GACRGYKDINMLAIQLLNPGGIL 335 (396)
T ss_pred HHHHhcCCCCCEEEECCCCCCCCh-HHHH----------------------------HHHHHHHHHHHHHHHHcCCCeEE
Confidence 32 2347999999999975432 1111 11223567888999999999998
Q ss_pred EEE-eCCCCcHHHHHHHH
Q 043334 187 IFN-MGGRPGQGVCKRLF 203 (903)
Q Consensus 187 l~~-~~~~~~~~~l~~ll 203 (903)
+.. +......+.+++++
T Consensus 336 v~~scs~~~~~~~f~~~v 353 (396)
T PRK15128 336 LTFSCSGLMTSDLFQKII 353 (396)
T ss_pred EEEeCCCcCCHHHHHHHH
Confidence 864 33334444444443
No 299
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=99.34 E-value=1.2e-11 Score=117.50 Aligned_cols=104 Identities=23% Similarity=0.304 Sum_probs=83.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++..++.+|+|+|+++.+++.+++|+..+++ .+++++.+|.....
T Consensus 19 ~~~~vldlG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----------------~~~~~~~~~~~~~~ 82 (124)
T TIGR02469 19 PGDVLWDIGAGSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGV----------------SNIVIVEGDAPEAL 82 (124)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCC----------------CceEEEeccccccC
Confidence 46799999999999999999988888999999999999999999987765 47899999876533
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.....+||+|++..+. ..+..+++.+++.|||||.+++.
T Consensus 83 ~~~~~~~D~v~~~~~~-----------------------------------------~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 83 EDSLPEPDRVFIGGSG-----------------------------------------GLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred hhhcCCCCEEEECCcc-----------------------------------------hhHHHHHHHHHHHcCCCCEEEEE
Confidence 2222389999853110 01237899999999999999986
Q ss_pred e
Q 043334 190 M 190 (903)
Q Consensus 190 ~ 190 (903)
.
T Consensus 122 ~ 122 (124)
T TIGR02469 122 A 122 (124)
T ss_pred e
Confidence 4
No 300
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.34 E-value=2.2e-10 Score=130.42 Aligned_cols=199 Identities=20% Similarity=0.199 Sum_probs=151.8
Q ss_pred CCcHHHHHHHHHHHHccCC-------CCC--chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh---ccC
Q 043334 628 PIPSLVKAAIFESFARQNM-------SES--EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC---ILE 695 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~~-------~~G--~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l---~~p 695 (903)
++|+.+++++.+.+..+.. ..+ ..+..+.+++.+++..|.+.+ + +|++++|++.++..++.++ +++
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~-~-~v~~~~~~t~a~~~~~~~l~~~~~~ 87 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD-E-EVVFTSNGTEALNAVASSLLNPLKP 87 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT-E-EEEEESSHHHHHHHHHHHHHHHGTT
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc-c-ccccccccchhhhhhhhcccccccc
Confidence 5788899999888764311 112 245567788888888898762 2 8999999999999999999 789
Q ss_pred CCeEEEcCCCcHHHH----HHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHH
Q 043334 696 GGTLCFPAGSNGNYV----SAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIEN 771 (903)
Q Consensus 696 GD~Vlv~~P~y~~~~----~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~e 771 (903)
||+|++.+-.|++.. ...+..|+++..++.+.++ .+|++++++.+++++ +++.++.-. |-||..++ +++
T Consensus 88 g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~--~~~~~~~~~~l~~~~-~lv~~~~~~-~~tG~~~p---i~~ 160 (371)
T PF00266_consen 88 GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGG--SLDLEDLEEALNPDT-RLVSISHVE-NSTGVRNP---IEE 160 (371)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTS--SCSHHHHHHHHHTTE-SEEEEESBE-TTTTBBSS---HHH
T ss_pred ccccccccccccccccccccccccchhhhccccccccc--hhhhhhhhhhhcccc-ceEEeeccc-ccccEEee---ece
Confidence 999999999998866 3345779999999886533 489999999998766 589899887 99999999 888
Q ss_pred HHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH
Q 043334 772 ILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 772 I~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~ 851 (903)
|.++|+++|+++++|-+.+.-. .+. . +... +..+++.|.-|.+|.+| +|+++.+++ +++.
T Consensus 161 I~~~~~~~~~~~~vD~~~~~g~---~~i---------d-~~~~----~~D~~~~s~~Kl~gp~G--~g~l~v~~~-~~~~ 220 (371)
T PF00266_consen 161 IAKLAHEYGALLVVDAAQSAGC---VPI---------D-LDEL----GADFLVFSSHKLGGPPG--LGFLYVRPE-AIER 220 (371)
T ss_dssp HHHHHHHTTSEEEEE-TTTTTT---SS------------TTTT----TESEEEEESTSTTSSST--EEEEEEEHH-HHHH
T ss_pred ehhhhhccCCceeEechhcccc---ccc---------c-cccc----ccceeeecccccCCCCc--hhhheehhh-hhhc
Confidence 9999999999999999885211 110 0 1121 35689999999556566 699999987 8888
Q ss_pred HHhC
Q 043334 852 FSSF 855 (903)
Q Consensus 852 l~~~ 855 (903)
+...
T Consensus 221 ~~p~ 224 (371)
T PF00266_consen 221 LRPA 224 (371)
T ss_dssp HHTS
T ss_pred cccc
Confidence 8543
No 301
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=99.34 E-value=2e-11 Score=134.06 Aligned_cols=133 Identities=28% Similarity=0.349 Sum_probs=98.2
Q ss_pred HHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCC
Q 043334 17 FYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLD 96 (903)
Q Consensus 17 ~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~ 96 (903)
.++.+.... .++++|||+|||+|.+++.+++. +..+|+|+|+|+.|++.|++|+..|+++ .
T Consensus 149 ~l~~l~~~~---~~g~~VLDvGcGsG~lai~aa~~-g~~~V~avDid~~al~~a~~n~~~n~~~---------------~ 209 (288)
T TIGR00406 149 CLEWLEDLD---LKDKNVIDVGCGSGILSIAALKL-GAAKVVGIDIDPLAVESARKNAELNQVS---------------D 209 (288)
T ss_pred HHHHHHhhc---CCCCEEEEeCCChhHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCC---------------c
Confidence 344444433 36789999999999999998764 5569999999999999999999988872 4
Q ss_pred cEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHH
Q 043334 97 RVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEG 176 (903)
Q Consensus 97 ~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~ 176 (903)
++.+..+|..... .++||+|++|+.. +.+..++.++
T Consensus 210 ~~~~~~~~~~~~~---~~~fDlVvan~~~-----------------------------------------~~l~~ll~~~ 245 (288)
T TIGR00406 210 RLQVKLIYLEQPI---EGKADVIVANILA-----------------------------------------EVIKELYPQF 245 (288)
T ss_pred ceEEEeccccccc---CCCceEEEEecCH-----------------------------------------HHHHHHHHHH
Confidence 6777777743322 2389999987420 0123678899
Q ss_pred hhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 177 IGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 177 ~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.++|||||.+++..-.......+.+.+++. |+....
T Consensus 246 ~~~LkpgG~li~sgi~~~~~~~v~~~~~~~-f~~~~~ 281 (288)
T TIGR00406 246 SRLVKPGGWLILSGILETQAQSVCDAYEQG-FTVVEI 281 (288)
T ss_pred HHHcCCCcEEEEEeCcHhHHHHHHHHHHcc-CceeeE
Confidence 999999999998654444555666777766 887765
No 302
>PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed
Probab=99.33 E-value=1.5e-11 Score=143.12 Aligned_cols=143 Identities=17% Similarity=0.228 Sum_probs=106.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. ..+|+|+|+|++|++.|++|+..+++ ++++++++|+.+..
T Consensus 297 ~~~~VLDlgcGtG~~sl~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~----------------~~v~~~~~d~~~~l 358 (443)
T PRK13168 297 PGDRVLDLFCGLGNFTLPLARQ--AAEVVGVEGVEAMVERARENARRNGL----------------DNVTFYHANLEEDF 358 (443)
T ss_pred CCCEEEEEeccCCHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCC----------------CceEEEEeChHHhh
Confidence 5689999999999999999987 47999999999999999999998887 47999999997653
Q ss_pred cC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 110 RD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 110 ~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
.. ...+||+|+.||||.-.+ ..++.+.+ ++|++.+
T Consensus 359 ~~~~~~~~~fD~Vi~dPPr~g~~-----------------------------------------~~~~~l~~-~~~~~iv 396 (443)
T PRK13168 359 TDQPWALGGFDKVLLDPPRAGAA-----------------------------------------EVMQALAK-LGPKRIV 396 (443)
T ss_pred hhhhhhcCCCCEEEECcCCcChH-----------------------------------------HHHHHHHh-cCCCeEE
Confidence 21 123799999999998311 12333322 6899999
Q ss_pred EEEeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeec
Q 043334 187 IFNMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEK 240 (903)
Q Consensus 187 l~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~ 240 (903)
++.++.......+ ..|.+.||++.++... .+|..+..++.++.+++
T Consensus 397 yvSCnp~tlaRDl-~~L~~~gY~l~~i~~~-------DmFP~T~HvE~v~lL~r 442 (443)
T PRK13168 397 YVSCNPATLARDA-GVLVEAGYRLKRAGML-------DMFPHTGHVESMALFER 442 (443)
T ss_pred EEEeChHHhhccH-HHHhhCCcEEEEEEEe-------ccCCCCCcEEEEEEEEe
Confidence 9988765555554 3566789999888422 23334456766666654
No 303
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.33 E-value=1.9e-10 Score=133.00 Aligned_cols=211 Identities=10% Similarity=0.056 Sum_probs=138.7
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHH-HccCCC-------CCchHHHHHHHH----HHHhhcCCCCCCCCcEEecCch
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESF-ARQNMS-------ESEIDVTPSIQQ----YIKSNFGFPIDINAEFIYADCS 681 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al-~~y~~~-------~G~~~lr~ala~----~l~~~~G~~~~pe~~I~vt~Gs 681 (903)
..+.++|-.++|.. +|.+++++...+ .+|+.. .| .+..+.+++ .+++.+|.+.. ++.++++
T Consensus 27 ~~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~~a----lv~~~SG 99 (416)
T PRK13034 27 QQDHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCDYA----NVQPHSG 99 (416)
T ss_pred HhcCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCCce----EEecCCc
Confidence 35678888888764 788999988885 666442 23 355677777 89998887643 4445555
Q ss_pred HHHHHHHHHHhccCCCeEEEcCCCcHHH-HHHHHH--cCCEE--EEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCC
Q 043334 682 QSLFNKLVLCCILEGGTLCFPAGSNGNY-VSAARF--LKANI--VNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPT 756 (903)
Q Consensus 682 ~~al~~ll~~l~~pGD~Vlv~~P~y~~~-~~~~~~--~G~~v--v~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~ 756 (903)
+.++..++.++++|||+|+++..+|... ...++. .+... +.++.+. .++.+|++++++.+...+.++|++..+.
T Consensus 100 ~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~d~~~le~~l~~~~~klVi~~~~~ 178 (416)
T PRK13034 100 SQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR-LTGLIDYDEVEELAKEHKPKLIIAGFSA 178 (416)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccccc-ccCCcCHHHHHHHHhhcCCeEEEECCCc
Confidence 7777778899999999999999988762 211111 12222 3454443 2466899999998865333466665554
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 757 INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 757 ~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
+ |...+ +.+|.++|+++|+++|+|++++.-.+..... ...+. ...++++|++|.++.+
T Consensus 179 -~--g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~--------~~~~~------~~Di~~~s~~K~l~g~-- 236 (416)
T PRK13034 179 -Y--PRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEH--------PNPFP------HAHVVTTTTHKTLRGP-- 236 (416)
T ss_pred -c--ccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCC--------CCCCC------CceEEEEeCcccCCCC--
Confidence 3 44544 7788888999999999999986433321110 00111 2468999999998423
Q ss_pred eeeEEEeCcHHHHHHHHh
Q 043334 837 KFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~ 854 (903)
.-|++++.++.+.+.++.
T Consensus 237 ~GG~v~~~~~~~~~~~~~ 254 (416)
T PRK13034 237 RGGMILTNDEEIAKKINS 254 (416)
T ss_pred CCeEEEECcHHHHHHHHh
Confidence 248888877645555554
No 304
>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism]
Probab=99.33 E-value=1.4e-11 Score=127.20 Aligned_cols=133 Identities=24% Similarity=0.226 Sum_probs=97.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCC------CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEE
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLP------SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHE 102 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~------~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~ 102 (903)
.++.++||+|||||-++..+.+..+. .+|+.+|+||+|++.++++....++.+ ..++.|++
T Consensus 99 ~~~m~~lDvaGGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~~~l~~-------------~~~~~w~~ 165 (296)
T KOG1540|consen 99 GKGMKVLDVAGGTGDIAFRILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKKRPLKA-------------SSRVEWVE 165 (296)
T ss_pred CCCCeEEEecCCcchhHHHHHHhhccccCCCCceEEEEeCCHHHHHHHHHHHhhcCCCc-------------CCceEEEe
Confidence 35789999999999999999998876 799999999999999999987766521 13599999
Q ss_pred ccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccC
Q 043334 103 SDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKP 182 (903)
Q Consensus 103 gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkp 182 (903)
+|..+++.+++ +||..+. .-. ......+++.+++++|+|||
T Consensus 166 ~dAE~LpFdd~-s~D~yTi-------------afG-------------------------IRN~th~~k~l~EAYRVLKp 206 (296)
T KOG1540|consen 166 GDAEDLPFDDD-SFDAYTI-------------AFG-------------------------IRNVTHIQKALREAYRVLKP 206 (296)
T ss_pred CCcccCCCCCC-cceeEEE-------------ecc-------------------------eecCCCHHHHHHHHHHhcCC
Confidence 99999986655 8998862 100 11112245899999999999
Q ss_pred CcEEEEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 183 SGIMIFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 183 gG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
||+|.+-.-+....+.++.+....-|.+...
T Consensus 207 GGrf~cLeFskv~~~~l~~fy~~ysf~Vlpv 237 (296)
T KOG1540|consen 207 GGRFSCLEFSKVENEPLKWFYDQYSFDVLPV 237 (296)
T ss_pred CcEEEEEEccccccHHHHHHHHhhhhhhhch
Confidence 9999885544444334444444444555444
No 305
>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed
Probab=99.32 E-value=2.5e-11 Score=135.11 Aligned_cols=142 Identities=15% Similarity=0.218 Sum_probs=104.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.|++.|++|++.+++ ++++++++|+.++.
T Consensus 173 ~~~~VLDl~cG~G~~sl~la~~--~~~V~gvD~s~~av~~A~~n~~~~~l----------------~~v~~~~~D~~~~~ 234 (315)
T PRK03522 173 PPRSMWDLFCGVGGFGLHCATP--GMQLTGIEISAEAIACAKQSAAELGL----------------TNVQFQALDSTQFA 234 (315)
T ss_pred CCCEEEEccCCCCHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHcCC----------------CceEEEEcCHHHHH
Confidence 4579999999999999999985 67999999999999999999998887 47999999998865
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|+.|||..- +.. .+. +....++|++++++.
T Consensus 235 ~~~~~~~D~Vv~dPPr~G------~~~----------------------------------~~~-~~l~~~~~~~ivyvs 273 (315)
T PRK03522 235 TAQGEVPDLVLVNPPRRG------IGK----------------------------------ELC-DYLSQMAPRFILYSS 273 (315)
T ss_pred HhcCCCCeEEEECCCCCC------ccH----------------------------------HHH-HHHHHcCCCeEEEEE
Confidence 432237999999999541 111 111 122335789999998
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeec
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEK 240 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~ 240 (903)
++.......+..+ .||+..++... ..|..+..++.++.+++
T Consensus 274 c~p~t~~rd~~~l---~~y~~~~~~~~-------DmFP~T~HvE~v~~l~r 314 (315)
T PRK03522 274 CNAQTMAKDLAHL---PGYRIERVQLF-------DMFPHTAHYEVLTLLVR 314 (315)
T ss_pred CCcccchhHHhhc---cCcEEEEEEEe-------ccCCCCCeEEEEEEEEc
Confidence 8887766665544 58998887422 23334455666655543
No 306
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.32 E-value=3.8e-10 Score=128.51 Aligned_cols=185 Identities=16% Similarity=0.217 Sum_probs=130.5
Q ss_pred HHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH-HHHHcCCEEEEecCCC-------
Q 043334 656 SIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS-AARFLKANIVNIPTES------- 727 (903)
Q Consensus 656 ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~-~~~~~G~~vv~v~~~~------- 727 (903)
.+++.+++++|.+ .++.+++++.++..+....++|||.| +.++|..... .+...|+..+.++.++
T Consensus 75 ~lE~~va~~~G~~-----~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~ 147 (450)
T TIGR02618 75 HLERTVRELYGFK-----YVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLN 147 (450)
T ss_pred HHHHHHHHHHCCC-----eEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccC
Confidence 4555555556754 57888888888887777889999977 7788755444 4788999777775541
Q ss_pred -CCCcccCHHHHHHHhhcCC---CcEEEEECCCCC-CcccCCCHHHHHHHHHHHHhCCcEEEEecCCCC--CccC---CC
Q 043334 728 -EVGFKMTEKTLVTILETVK---KPWVYISGPTIN-PTGLLYSNKEIENILTVCAKYGARVVIDTAFSG--LEFN---YE 797 (903)
Q Consensus 728 -~~~f~ld~~~L~~~l~~~~---~~~vil~~P~~N-PTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~--l~f~---~~ 797 (903)
...+++|+++++++++++. .+++.+.+++ | ..|.++|.+++++|.++|++||+.||+|-+... -.|- ..
T Consensus 148 ~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~-N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~ 226 (450)
T TIGR02618 148 IPFKGNVDLKKLQKLIDEVGADKIPYICLAVTV-NLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQ 226 (450)
T ss_pred CCCCCCcCHHHHHHHhccccCcccCceEEEEec-ccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccc
Confidence 2357899999999998642 2478888887 7 558999999999999999999999999998742 1120 11
Q ss_pred CCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc-cceeeEEEeCcHHHHHHHHhCC
Q 043334 798 GWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG-ALKFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 798 ~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~~li~~l~~~~ 856 (903)
.....++......+-.. -..+..|..|.++.| | |+++..+++++++++...
T Consensus 227 g~~~~~i~ei~~e~~~~-----aD~~~~S~~Kd~~~~~G---G~l~~~d~~l~~k~r~~~ 278 (450)
T TIGR02618 227 GYEDKSIAEILKEMMSY-----ADGCTMSGKKDCLVNIG---GFLCMNDDEMFQSAKELV 278 (450)
T ss_pred cccCCCHHHHHHHHhcc-----CcEEEEeeccCCCCCCc---eEEEeCCHHHHHHHHHHh
Confidence 11112332333333232 244889999998766 5 788877777999888763
No 307
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.32 E-value=1.2e-10 Score=132.67 Aligned_cols=173 Identities=10% Similarity=0.089 Sum_probs=131.6
Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEE
Q 043334 646 MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIV 721 (903)
Q Consensus 646 ~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv 721 (903)
+++...+-+..+++.++...|.+ ..++++++++++..++.+++++||+|++++..|.+....+ +..|+++.
T Consensus 56 YsR~~nPt~~~le~~la~LEg~~-----~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~ 130 (395)
T PRK08114 56 YGRRGTLTHFSLQEAMCELEGGA-----GCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTT 130 (395)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC-----eEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEE
Confidence 44444456788999998876643 4566666899999889999999999999999998776654 66799999
Q ss_pred EecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhC--CcEEEEecCCCCCccCCCCC
Q 043334 722 NIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKY--GARVVIDTAFSGLEFNYEGW 799 (903)
Q Consensus 722 ~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~--~i~VI~DeaY~~l~f~~~~~ 799 (903)
.++. .|.+.+++++++++ ++|++.+|+ ||||.+.+ +++|+++|+++ |+++|+|.+++--.+ -+
T Consensus 131 ~vd~-------~d~~~l~~~l~~~T-rlV~~Etps-Np~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~-- 195 (395)
T PRK08114 131 WFDP-------LIGADIAKLIQPNT-KVVFLESPG-SITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL-FK-- 195 (395)
T ss_pred EECC-------CCHHHHHHhcCCCc-eEEEEECCC-CCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc-cC--
Confidence 8874 36788999998877 599999999 99999988 88999999998 499999999953111 00
Q ss_pred CCCchhhhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHh
Q 043334 800 GGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 800 s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~ 854 (903)
... . +-.++++|.+|.++.+| .-.|.++.+++ +.+.+..
T Consensus 196 -------pl~----~----GaDivv~S~tKyl~Ghsdv~~G~v~~~~~-~~~~l~~ 235 (395)
T PRK08114 196 -------ALD----F----GIDISIQAGTKYLVGHSDAMIGTAVANAR-CWEQLRE 235 (395)
T ss_pred -------HHH----c----CCcEEEEcCcccccCCCcceeEEEEcCHH-HHHHHHH
Confidence 011 1 35799999999887665 56676666554 6565553
No 308
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.32 E-value=3.7e-11 Score=139.05 Aligned_cols=160 Identities=10% Similarity=0.041 Sum_probs=121.9
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~ 726 (903)
.+..+.+++.+++.+|.+. -++++ ++++++..++.+++++||+|+++...|...... +...|++++.++ +
T Consensus 68 ~p~~~~Le~~lA~l~g~~~----av~~s-SG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d 141 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVA----ALLLA-SGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D 141 (436)
T ss_pred CchHHHHHHHHHHHhCCCe----EEEEc-cHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence 3456788888988888643 25555 556688888899999999999999888876543 344788888885 2
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
. .|++.+++++++++ ++|++.+|+ ||+|.+.+ +++|.++|+++|+++|+|++++.-.. .. +
T Consensus 142 ~-----~d~e~l~~ai~~~t-klV~ie~~s-Np~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~-~~--------p 202 (436)
T PRK07812 142 P-----DDLDAWRAAVRPNT-KAFFAETIS-NPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL-IR--------P 202 (436)
T ss_pred C-----CCHHHHHHhCCCCC-eEEEEECCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-CC--------c
Confidence 2 27899999998877 599999998 99999998 78888999999999999998742111 00 1
Q ss_pred hhhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+. . +-.+++.|++|.+|..|--+|.+++.
T Consensus 203 -l~----~----GaDivv~S~tK~lgg~G~~i~G~vv~ 231 (436)
T PRK07812 203 -LE----H----GADIVVHSATKYLGGHGTAIAGVIVD 231 (436)
T ss_pred -hh----c----CCCEEEEecccccCCCCCeEEEEEEc
Confidence 11 1 24578899999999888778887774
No 309
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.31 E-value=1.7e-10 Score=133.70 Aligned_cols=271 Identities=10% Similarity=0.041 Sum_probs=165.4
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCC---CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMS---ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~---~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..|. ..++ ..+.+.+++.+.+.+.... ....+....+++.+.+..... ..+ .++++++++++
T Consensus 29 D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~-~v~f~~sGseA 106 (420)
T TIGR00700 29 DVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGS-GPK-KSVFFNSGAEA 106 (420)
T ss_pred eCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCC-CCC-EEEEeCCcHHH
Confidence 34677889986663 3333 4678899988887654221 122344556777777654211 112 68888888888
Q ss_pred HHHHHHHhcc-CC-CeEEEcCCCcHHHHHHH-HHcCC-------------EEEEecCCC--C-------CCcccCHHHHH
Q 043334 685 FNKLVLCCIL-EG-GTLCFPAGSNGNYVSAA-RFLKA-------------NIVNIPTES--E-------VGFKMTEKTLV 739 (903)
Q Consensus 685 l~~ll~~l~~-pG-D~Vlv~~P~y~~~~~~~-~~~G~-------------~vv~v~~~~--~-------~~f~ld~~~L~ 739 (903)
...++..-.. .| ..|+...-+|-+....+ ...|- .+..+|... . ..+.-+++.++
T Consensus 107 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (420)
T TIGR00700 107 VENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAAR 186 (420)
T ss_pred HHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHH
Confidence 8877654321 22 45776676665533222 21111 112222210 0 00111245666
Q ss_pred HHhh---cCCCcEEEEECCCCCCcccCCC-HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCC
Q 043334 740 TILE---TVKKPWVYISGPTINPTGLLYS-NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSST 815 (903)
Q Consensus 740 ~~l~---~~~~~~vil~~P~~NPTG~v~s-~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~ 815 (903)
+.+. .....+.+|.-|-|.-+|.+++ .+.+++|.++|++||+++|.||+|.++.+.+... .....+..+
T Consensus 187 ~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~-------a~~~~~~~p 259 (420)
T TIGR00700 187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMF-------ACEHEGPEP 259 (420)
T ss_pred HHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhH-------HHhhcCCCC
Confidence 6653 1122356666677566787665 5559999999999999999999998887666431 122222222
Q ss_pred CCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHH
Q 043334 816 NSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRN 893 (903)
Q Consensus 816 ~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~ 893 (903)
-+.+|||.++ +|+|+||++++++ +++.+.... .+.+.++++|.++.+.|+.-.. +.+.+++.++.+.
T Consensus 260 -------Di~~lsK~l~-~G~pig~v~~~~~-i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~~~~~~~~~g~~ 328 (420)
T TIGR00700 260 -------DLITTAKSLA-DGLPLSGVTGRAE-IMDAPAPGGLGGTYAGNPLACAAALAVLAIIES--EGLIERARQIGRL 328 (420)
T ss_pred -------CEEEeecccc-CCcceEEEEecHH-HHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence 2446999998 9999999999987 888876432 3778889999999888742111 2356677777777
Q ss_pred HHHHHHHH
Q 043334 894 LESRSKRL 901 (903)
Q Consensus 894 y~~Rr~~l 901 (903)
++++.+.+
T Consensus 329 l~~~L~~l 336 (420)
T TIGR00700 329 VTDRLTTL 336 (420)
T ss_pred HHHHHHHH
Confidence 77776654
No 310
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=99.31 E-value=4.2e-11 Score=132.13 Aligned_cols=152 Identities=14% Similarity=0.144 Sum_probs=104.0
Q ss_pred CcccCcchhHHHH--HHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCC
Q 043334 6 SIFIPEDWSFTFY--EGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKG 83 (903)
Q Consensus 6 ~vfiP~~w~~~~~--~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~ 83 (903)
++.+|.+|...+. ..+..+. ..++++|||+|||+|.++..++... ..+|+|+|.|+.|+..++......+.
T Consensus 97 ~~~~~~e~~s~~~~~~~l~~l~--~~~g~~VLDvGCG~G~~~~~~~~~g-~~~v~GiDpS~~ml~q~~~~~~~~~~---- 169 (314)
T TIGR00452 97 GIKIDSEWRSDIKWDRVLPHLS--PLKGRTILDVGCGSGYHMWRMLGHG-AKSLVGIDPTVLFLCQFEAVRKLLDN---- 169 (314)
T ss_pred cccCCHHHHHHHHHHHHHHhcC--CCCCCEEEEeccCCcHHHHHHHHcC-CCEEEEEcCCHHHHHHHHHHHHHhcc----
Confidence 6777877765433 2333332 2568999999999999999988763 45899999999999875432221111
Q ss_pred CCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccccccc
Q 043334 84 QPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQ 163 (903)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~ 163 (903)
..++.+..+|+.++.... +||+|+++--....+
T Consensus 170 -----------~~~v~~~~~~ie~lp~~~--~FD~V~s~gvL~H~~---------------------------------- 202 (314)
T TIGR00452 170 -----------DKRAILEPLGIEQLHELY--AFDTVFSMGVLYHRK---------------------------------- 202 (314)
T ss_pred -----------CCCeEEEECCHHHCCCCC--CcCEEEEcchhhccC----------------------------------
Confidence 136888889988875433 799999642111100
Q ss_pred ccHHHHHHHHHHHhhcccCCcEEEEEeC---C--------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 164 FGLGLIARAVEEGIGVIKPSGIMIFNMG---G--------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 164 ~g~~~~~~~l~~~~~~LkpgG~ll~~~~---~--------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
....+++++++.|||||.+++... . .+....+..++++.||+.+++..
T Consensus 203 ----dp~~~L~el~r~LkpGG~Lvletl~i~g~~~~~l~p~~ry~k~~nv~flpS~~~L~~~L~~aGF~~V~i~~ 273 (314)
T TIGR00452 203 ----SPLEHLKQLKHQLVIKGELVLETLVIDGDLNTVLVPKDRYAKMKNVYFIPSVSALKNWLEKVGFENFRILD 273 (314)
T ss_pred ----CHHHHHHHHHHhcCCCCEEEEEEEEecCccccccCchHHHHhccccccCCCHHHHHHHHHHCCCeEEEEEe
Confidence 012679999999999999998421 1 11345667889999999988743
No 311
>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional
Probab=99.30 E-value=2.6e-11 Score=125.51 Aligned_cols=80 Identities=10% Similarity=0.076 Sum_probs=67.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.++.+. ..+|+++|+++++++.+++|++.+++ .+++++++|+.+..
T Consensus 53 ~~~~vLDl~~GsG~l~l~~lsr~-a~~V~~vE~~~~a~~~a~~Nl~~~~~----------------~~v~~~~~D~~~~l 115 (199)
T PRK10909 53 VDARCLDCFAGSGALGLEALSRY-AAGATLLEMDRAVAQQLIKNLATLKA----------------GNARVVNTNALSFL 115 (199)
T ss_pred CCCEEEEcCCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCC----------------CcEEEEEchHHHHH
Confidence 46799999999999999755443 57999999999999999999998886 47999999998765
Q ss_pred cCCCCceeEEEECCCCC
Q 043334 110 RDHDIQLERIVGCIPQI 126 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~ 126 (903)
.....+||+|++||||.
T Consensus 116 ~~~~~~fDlV~~DPPy~ 132 (199)
T PRK10909 116 AQPGTPHNVVFVDPPFR 132 (199)
T ss_pred hhcCCCceEEEECCCCC
Confidence 32233699999999986
No 312
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=99.30 E-value=5.6e-11 Score=138.44 Aligned_cols=152 Identities=18% Similarity=0.139 Sum_probs=105.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..++.+++.. +..+|+|+|+++.+++.+++|+..+|+ .+++++++|+.+.
T Consensus 250 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~----------------~~v~~~~~D~~~~ 313 (444)
T PRK14902 250 GGDTVLDACAAPGGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGL----------------TNIETKALDARKV 313 (444)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----------------CeEEEEeCCcccc
Confidence 57899999999999999999876 457999999999999999999998887 3699999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....++||+|++|||+........-+.......++. ......+...+++.+.++|||||.+++
T Consensus 314 ~~~~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~----------------~~~l~~~q~~iL~~a~~~LkpGG~lvy 377 (444)
T PRK14902 314 HEKFAEKFDKILVDAPCSGLGVIRRKPDIKYNKTKED----------------IESLQEIQLEILESVAQYLKKGGILVY 377 (444)
T ss_pred cchhcccCCEEEEcCCCCCCeeeccCcchhhcCCHHH----------------HHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4222247999999999763321111000000000000 001122345789999999999999997
Q ss_pred EeCCC---CcHHHHHHHHHHCC-CeEEEE
Q 043334 189 NMGGR---PGQGVCKRLFERRG-FRVDKL 213 (903)
Q Consensus 189 ~~~~~---~~~~~l~~ll~~~g-f~~~~~ 213 (903)
.+.+. .....+...+++.+ |+.+..
T Consensus 378 stcs~~~~Ene~vv~~~l~~~~~~~~~~~ 406 (444)
T PRK14902 378 STCTIEKEENEEVIEAFLEEHPEFELVPL 406 (444)
T ss_pred EcCCCChhhhHHHHHHHHHhCCCcEEecc
Confidence 55433 34556666777663 776554
No 313
>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB. This family consists of RNA methyltransferases designated RumB, formerly YbjF. Members act on 23S rRNA U747 and the equivalent position in other proteobacterial species. This family is homologous to the other 23S rRNA methyltransferase RumA and to the tRNA methyltransferase TrmA.
Probab=99.29 E-value=3.2e-11 Score=137.12 Aligned_cols=123 Identities=15% Similarity=0.202 Sum_probs=95.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.++.. +.+|+|+|+|+.+++.|++|++.+++ ++++++++|+.+..
T Consensus 233 ~~~~vLDL~cG~G~~~l~la~~--~~~v~~vE~~~~av~~a~~N~~~~~~----------------~~~~~~~~d~~~~~ 294 (374)
T TIGR02085 233 PVTQMWDLFCGVGGFGLHCAGP--DTQLTGIEIESEAIACAQQSAQMLGL----------------DNLSFAALDSAKFA 294 (374)
T ss_pred CCCEEEEccCCccHHHHHHhhc--CCeEEEEECCHHHHHHHHHHHHHcCC----------------CcEEEEECCHHHHH
Confidence 4579999999999999999965 57999999999999999999999887 47999999998765
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.....+||+|+.|||+-- +.. .+++.+. .++|++.+++.
T Consensus 295 ~~~~~~~D~vi~DPPr~G------~~~----------------------------------~~l~~l~-~~~p~~ivyvs 333 (374)
T TIGR02085 295 TAQMSAPELVLVNPPRRG------IGK----------------------------------ELCDYLS-QMAPKFILYSS 333 (374)
T ss_pred HhcCCCCCEEEECCCCCC------CcH----------------------------------HHHHHHH-hcCCCeEEEEE
Confidence 322236999999999741 111 2233332 37899999999
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
++.......+.. | .||++.++.
T Consensus 334 c~p~TlaRDl~~-L--~gy~l~~~~ 355 (374)
T TIGR02085 334 CNAQTMAKDIAE-L--SGYQIERVQ 355 (374)
T ss_pred eCHHHHHHHHHH-h--cCceEEEEE
Confidence 987666555543 4 689988873
No 314
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.29 E-value=4.3e-10 Score=130.27 Aligned_cols=269 Identities=10% Similarity=0.037 Sum_probs=164.7
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCC---CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMS---ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~---~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..|. ..++ ..+.+.+++.+.+.+.... ....+....+++.+.+..... ..+ .++++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~-~~~f~~sGseA 113 (421)
T PRK06777 36 DVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPID-GPA-KTAFFTTGAEA 113 (421)
T ss_pred eCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCC-CCc-eEEEeCCcHHH
Confidence 35677889986653 2333 4677888888888764321 112344566777777654321 112 68888888888
Q ss_pred HHHHHHHhcc-CC-CeEEEcCCCcHHHHHHHH-HcCCE-------------EEEecCCCC-CC--cccCHHHHHHHhhc-
Q 043334 685 FNKLVLCCIL-EG-GTLCFPAGSNGNYVSAAR-FLKAN-------------IVNIPTESE-VG--FKMTEKTLVTILET- 744 (903)
Q Consensus 685 l~~ll~~l~~-pG-D~Vlv~~P~y~~~~~~~~-~~G~~-------------vv~v~~~~~-~~--f~ld~~~L~~~l~~- 744 (903)
...++..... .| ..|+...-+|-+....+. ..|.. +..++.... .+ ..-+++.+++.+..
T Consensus 114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~ 193 (421)
T PRK06777 114 VENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKAD 193 (421)
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhc
Confidence 7776654321 23 457776766655433332 22210 111111110 00 00125667777652
Q ss_pred --CCCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 745 --VKKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 745 --~~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
....+.++.-|-|+..|. +++.+.+++|.++|+++|+++|.||+|.++.+.+..+ + ...++..+ |
T Consensus 194 ~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~---~----~~~~~~~p---D-- 261 (421)
T PRK06777 194 IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLF---A----MEYYDVKP---D-- 261 (421)
T ss_pred cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchh---h----hhhcCCCC---C--
Confidence 122356666777788885 6899999999999999999999999998876666431 1 12222222 2
Q ss_pred EEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 822 SLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 822 I~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
+-+|||.++ +|+|+||++++++ +++.+.... .+.+.+++.|.++.+.|+.-.. +.+.+.+.++.+.++++.+
T Consensus 262 --iv~~sK~l~-~G~pigav~~~~~-i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~ 335 (421)
T PRK06777 262 --LITMAKSLG-GGMPISAVVGRAE-VMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE--EKLCQRALILGAHLVEVLE 335 (421)
T ss_pred --EEeeehhhc-CCCceEEEEEcHH-HHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 227999998 9999999999987 888876443 3677899999999999952111 2334444444545544443
No 315
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=99.28 E-value=1.2e-11 Score=111.34 Aligned_cols=95 Identities=21% Similarity=0.298 Sum_probs=73.5
Q ss_pred EEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCC
Q 043334 35 AELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDI 114 (903)
Q Consensus 35 LDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~ 114 (903)
||+|||+|..+..+++. ++.+|+|+|+++++++.++++.... ++.+.++|+.+++.++ +
T Consensus 1 LdiG~G~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~-------------------~~~~~~~d~~~l~~~~-~ 59 (95)
T PF08241_consen 1 LDIGCGTGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNE-------------------GVSFRQGDAEDLPFPD-N 59 (95)
T ss_dssp EEET-TTSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTS-------------------TEEEEESBTTSSSS-T-T
T ss_pred CEecCcCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhccccc-------------------CchheeehHHhCcccc-c
Confidence 89999999999999998 7899999999999999999887433 4669999999986554 4
Q ss_pred ceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 115 QLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 115 ~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+||+|+++--+.. + +....+++++.|+|||||+++|
T Consensus 60 sfD~v~~~~~~~~------~--------------------------------~~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 60 SFDVVFSNSVLHH------L--------------------------------EDPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp -EEEEEEESHGGG------S--------------------------------SHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccccccceee------c--------------------------------cCHHHHHHHHHHHcCcCeEEeC
Confidence 9999986411110 0 1244889999999999999986
No 316
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=99.28 E-value=5.5e-11 Score=128.92 Aligned_cols=129 Identities=19% Similarity=0.175 Sum_probs=94.0
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|..+..+++.. +.+|+|+|+++.|++.|+++... .+++.+.++|+.+.
T Consensus 51 ~~~~~VLDiGcG~G~~a~~la~~~-~~~v~giD~s~~~~~~a~~~~~~------------------~~~i~~~~~D~~~~ 111 (263)
T PTZ00098 51 NENSKVLDIGSGLGGGCKYINEKY-GAHVHGVDICEKMVNIAKLRNSD------------------KNKIEFEANDILKK 111 (263)
T ss_pred CCCCEEEEEcCCCChhhHHHHhhc-CCEEEEEECCHHHHHHHHHHcCc------------------CCceEEEECCcccC
Confidence 356899999999999999998765 67999999999999999987632 14799999999875
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+.+. ++||+|+++.-.... .......++++++++|||||.+++
T Consensus 112 ~~~~-~~FD~V~s~~~l~h~------------------------------------~~~d~~~~l~~i~r~LkPGG~lvi 154 (263)
T PTZ00098 112 DFPE-NTFDMIYSRDAILHL------------------------------------SYADKKKLFEKCYKWLKPNGILLI 154 (263)
T ss_pred CCCC-CCeEEEEEhhhHHhC------------------------------------CHHHHHHHHHHHHHHcCCCcEEEE
Confidence 4433 389999963211100 001123789999999999999998
Q ss_pred EeCC---------------------CCcHHHHHHHHHHCCCeEEEE
Q 043334 189 NMGG---------------------RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 189 ~~~~---------------------~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.... ......+.++++++||..+..
T Consensus 155 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 200 (263)
T PTZ00098 155 TDYCADKIENWDEEFKAYIKKRKYTLIPIQEYGDLIKSCNFQNVVA 200 (263)
T ss_pred EEeccccccCcHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCCeeeE
Confidence 4321 012345567788888887765
No 317
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=99.28 E-value=1.7e-11 Score=127.00 Aligned_cols=110 Identities=16% Similarity=0.344 Sum_probs=89.7
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||-|.++..+|+. |++|+|+|+++++|+.|+..+..+++ .+++.+....++
T Consensus 58 l~g~~vLDvGCGgG~Lse~mAr~--Ga~VtgiD~se~~I~~Ak~ha~e~gv-----------------~i~y~~~~~edl 118 (243)
T COG2227 58 LPGLRVLDVGCGGGILSEPLARL--GASVTGIDASEKPIEVAKLHALESGV-----------------NIDYRQATVEDL 118 (243)
T ss_pred CCCCeEEEecCCccHhhHHHHHC--CCeeEEecCChHHHHHHHHhhhhccc-----------------cccchhhhHHHH
Confidence 47899999999999999999998 79999999999999999999988886 577888888887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+|. ++.+|-++ .+.+++.+.+++||||.+++
T Consensus 119 ~~~~-~~FDvV~cm--------------EVlEHv~d------------------------p~~~~~~c~~lvkP~G~lf~ 159 (243)
T COG2227 119 ASAG-GQFDVVTCM--------------EVLEHVPD------------------------PESFLRACAKLVKPGGILFL 159 (243)
T ss_pred HhcC-CCccEEEEh--------------hHHHccCC------------------------HHHHHHHHHHHcCCCcEEEE
Confidence 6553 599999962 23343222 23689999999999999999
Q ss_pred EeCCCCcH
Q 043334 189 NMGGRPGQ 196 (903)
Q Consensus 189 ~~~~~~~~ 196 (903)
..-.+...
T Consensus 160 STinrt~k 167 (243)
T COG2227 160 STINRTLK 167 (243)
T ss_pred eccccCHH
Confidence 66655433
No 318
>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes.
Probab=99.27 E-value=4.8e-11 Score=126.16 Aligned_cols=128 Identities=17% Similarity=0.152 Sum_probs=97.9
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccC
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD 111 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~ 111 (903)
++|||+|||+|..+..+++.+++.+|+|+|+|+++++.|++++...++ .+++++..+|+.+.+..
T Consensus 1 ~~vLDiGcG~G~~~~~la~~~~~~~v~gid~s~~~~~~a~~~~~~~gl---------------~~~i~~~~~d~~~~~~~ 65 (224)
T smart00828 1 KRVLDFGCGYGSDLIDLAERHPHLQLHGYTISPEQAEVGRERIRALGL---------------QGRIRIFYRDSAKDPFP 65 (224)
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC---------------CcceEEEecccccCCCC
Confidence 479999999999999999988788999999999999999999987776 36899999998665333
Q ss_pred CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeC
Q 043334 112 HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMG 191 (903)
Q Consensus 112 ~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~ 191 (903)
++||+|+++ .+.++.. ....+++++.++|||||.+++...
T Consensus 66 --~~fD~I~~~--------------~~l~~~~------------------------~~~~~l~~~~~~LkpgG~l~i~~~ 105 (224)
T smart00828 66 --DTYDLVFGF--------------EVIHHIK------------------------DKMDLFSNISRHLKDGGHLVLADF 105 (224)
T ss_pred --CCCCEeehH--------------HHHHhCC------------------------CHHHHHHHHHHHcCCCCEEEEEEc
Confidence 389999842 0011100 023789999999999999998432
Q ss_pred C---------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 192 G---------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 192 ~---------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
. ......+.+++.+.||...+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~Gf~~~~~~ 143 (224)
T smart00828 106 IANLLSAIEHEETTSYLVTREEWAELLARNNLRVVEGV 143 (224)
T ss_pred ccccCccccccccccccCCHHHHHHHHHHCCCeEEEeE
Confidence 1 1134556778999999987763
No 319
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=5.3e-10 Score=129.47 Aligned_cols=271 Identities=12% Similarity=0.093 Sum_probs=171.4
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCC--C-CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNM--S-ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~--~-~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..|. ..++ .+|.+.+++.+.+.+... . ....+....+++.+.+....... + .++++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~-~-~v~f~~SGseA 113 (425)
T PRK07495 36 DKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFA-K-KTIFVTTGAEA 113 (425)
T ss_pred eCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCC-C-EEEECCchHHH
Confidence 35678899987663 2333 577788888888765322 1 22334556677777765432211 2 79999999998
Q ss_pred HHHHHHHhcc-C-CCeEEEcCCCcHHHHHHH-HHcC-------------CEEEEecCCCC-CCccc--CHHHHHHHhhc-
Q 043334 685 FNKLVLCCIL-E-GGTLCFPAGSNGNYVSAA-RFLK-------------ANIVNIPTESE-VGFKM--TEKTLVTILET- 744 (903)
Q Consensus 685 l~~ll~~l~~-p-GD~Vlv~~P~y~~~~~~~-~~~G-------------~~vv~v~~~~~-~~f~l--d~~~L~~~l~~- 744 (903)
...++..... . ..+|+...-+|-+....+ ...| ..++.+|.... .+... +.+.+++.+..
T Consensus 114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~ 193 (425)
T PRK07495 114 VENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKAD 193 (425)
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhc
Confidence 8877764321 2 346777676665432222 1111 02233333211 11100 13455666542
Q ss_pred --CCCcEEEEECCC-CCCcc-cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc
Q 043334 745 --VKKPWVYISGPT-INPTG-LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN 820 (903)
Q Consensus 745 --~~~~~vil~~P~-~NPTG-~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~ 820 (903)
....+.++.-|. +| +| .+++.+.+++|.++|++||+++|.||+|.++-..+..+ . .... +.
T Consensus 194 ~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~---a----~~~~-------gv 258 (425)
T PRK07495 194 VDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF---A----MEHH-------EV 258 (425)
T ss_pred cCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce---e----eccc-------CC
Confidence 222467777788 66 88 56899999999999999999999999998765544321 1 1111 23
Q ss_pred eEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 821 VSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 821 vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
+.-+.+|||.++ +|+|+|+++++++ +++.+.... .+.+.+++.+.++.+.|+.-.. +.+.++++++.+.++++.
T Consensus 259 ~pDi~tlsK~l~-~G~pigav~~~~~-i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L 334 (425)
T PRK07495 259 AADLTTMAKGLA-GGFPLAAVTGRAE-IMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE--EDLCERANQLGNRLKQRL 334 (425)
T ss_pred CCCEEeehhhhc-CCccceEEEEcHH-HHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHH
Confidence 445789999997 8999999999987 888775432 3677888999977777742221 246677778888888777
Q ss_pred HHHh
Q 043334 899 KRLK 902 (903)
Q Consensus 899 ~~l~ 902 (903)
+.+.
T Consensus 335 ~~l~ 338 (425)
T PRK07495 335 ASLR 338 (425)
T ss_pred HHHH
Confidence 6653
No 320
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.27 E-value=4e-10 Score=128.20 Aligned_cols=176 Identities=15% Similarity=0.149 Sum_probs=130.5
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHH----HcCCEEEE
Q 043334 647 SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAAR----FLKANIVN 722 (903)
Q Consensus 647 ~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~----~~G~~vv~ 722 (903)
.+...+-+..+++.++...|.. ..++++.+++|+..++.+++++||+|++++..|.+....++ ..|+++..
T Consensus 50 ~R~gnPt~~~le~~la~Le~g~-----~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~ 124 (386)
T PF01053_consen 50 SRYGNPTVRALEQRLAALEGGE-----DALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTF 124 (386)
T ss_dssp TTTC-HHHHHHHHHHHHHHT-S-----EEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEE
T ss_pred eccccccHHHHHHHHHHhhccc-----ceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEE
Confidence 3333456788888888887752 57888899999999999999999999999999999877664 46999988
Q ss_pred ecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCC-cEEEEecCCCCCccCCCCCCC
Q 043334 723 IPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYG-ARVVIDTAFSGLEFNYEGWGG 801 (903)
Q Consensus 723 v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~-i~VI~DeaY~~l~f~~~~~s~ 801 (903)
++. -|++++++++++++ ++|++-+|. ||+..+.+ +++|+++|+++| +++|+|+.|+...+. .
T Consensus 125 ~d~-------~d~~~l~~~l~~~t-~~v~~Esps-NP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~-~---- 187 (386)
T PF01053_consen 125 VDP-------TDLEALEAALRPNT-KLVFLESPS-NPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ-N---- 187 (386)
T ss_dssp EST-------TSHHHHHHHHCTTE-EEEEEESSB-TTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC------
T ss_pred eCc-------hhHHHHHhhccccc-eEEEEEcCC-Cccccccc---HHHHHHHHHHhCCceEEeeccccceeee-c----
Confidence 865 36899999999877 599999999 99988876 999999999998 999999999532110 0
Q ss_pred CchhhhhhhhccCCCCCCceEEEccCchhcccccce-eeEEEeCc-HHHHHHHHhCCC
Q 043334 802 WDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK-FGFLVLNH-PQLVDAFSSFPG 857 (903)
Q Consensus 802 ~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR-iG~lv~~~-~~li~~l~~~~~ 857 (903)
+ +. - +-.|++.|.||.++..|-- .|.+++++ +++.+.+.....
T Consensus 188 ----p-L~---~-----GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~ 232 (386)
T PF01053_consen 188 ----P-LE---L-----GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR 232 (386)
T ss_dssp ----G-GG---G-----T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH
T ss_pred ----c-Cc---C-----CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh
Confidence 1 11 1 3579999999999745544 56777665 447777765543
No 321
>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional
Probab=99.27 E-value=8.3e-11 Score=131.01 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=93.9
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++++|||+|||+|.++..++... ..+|+|+|+|+.++..++......+. ..++.+..+|+.++
T Consensus 121 l~g~~VLDIGCG~G~~~~~la~~g-~~~V~GiD~S~~~l~q~~a~~~~~~~---------------~~~i~~~~~d~e~l 184 (322)
T PRK15068 121 LKGRTVLDVGCGNGYHMWRMLGAG-AKLVVGIDPSQLFLCQFEAVRKLLGN---------------DQRAHLLPLGIEQL 184 (322)
T ss_pred CCCCEEEEeccCCcHHHHHHHHcC-CCEEEEEcCCHHHHHHHHHHHHhcCC---------------CCCeEEEeCCHHHC
Confidence 467899999999999999999874 45799999999998765543322211 14799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+. .++||+|+++--.. |.. ....+++++++.|+|||.+++
T Consensus 185 p~--~~~FD~V~s~~vl~--------------H~~------------------------dp~~~L~~l~~~LkpGG~lvl 224 (322)
T PRK15068 185 PA--LKAFDTVFSMGVLY--------------HRR------------------------SPLDHLKQLKDQLVPGGELVL 224 (322)
T ss_pred CC--cCCcCEEEECChhh--------------ccC------------------------CHHHHHHHHHHhcCCCcEEEE
Confidence 65 34899999631110 100 022679999999999999998
Q ss_pred EeC---C--------------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMG---G--------------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~---~--------------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... . .+....+..+++++||+.+++.
T Consensus 225 ~~~~i~~~~~~~l~p~~~y~~~~~~~~lps~~~l~~~L~~aGF~~i~~~ 273 (322)
T PRK15068 225 ETLVIDGDENTVLVPGDRYAKMRNVYFIPSVPALKNWLERAGFKDVRIV 273 (322)
T ss_pred EEEEecCCCccccCchhHHhcCccceeCCCHHHHHHHHHHcCCceEEEE
Confidence 421 0 1134566889999999988874
No 322
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=99.27 E-value=3.2e-11 Score=130.34 Aligned_cols=103 Identities=21% Similarity=0.412 Sum_probs=84.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+++.+|+|+|+|+.|++.|+++. +++.++.+|+.++
T Consensus 30 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~---------------------~~~~~~~~d~~~~ 88 (258)
T PRK01683 30 ENPRYVVDLGCGPGNSTELLVERWPAARITGIDSSPAMLAEARSRL---------------------PDCQFVEADIASW 88 (258)
T ss_pred cCCCEEEEEcccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhC---------------------CCCeEEECchhcc
Confidence 3568999999999999999999988899999999999999998774 3688999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... .+||+|++|..+...++ ...+++++.+.|||||.+++
T Consensus 89 ~~~--~~fD~v~~~~~l~~~~d--------------------------------------~~~~l~~~~~~LkpgG~~~~ 128 (258)
T PRK01683 89 QPP--QALDLIFANASLQWLPD--------------------------------------HLELFPRLVSLLAPGGVLAV 128 (258)
T ss_pred CCC--CCccEEEEccChhhCCC--------------------------------------HHHHHHHHHHhcCCCcEEEE
Confidence 533 38999998754432111 12679999999999999999
Q ss_pred EeCC
Q 043334 189 NMGG 192 (903)
Q Consensus 189 ~~~~ 192 (903)
..+.
T Consensus 129 ~~~~ 132 (258)
T PRK01683 129 QMPD 132 (258)
T ss_pred ECCC
Confidence 7654
No 323
>PRK07402 precorrin-6B methylase; Provisional
Probab=99.26 E-value=5.7e-11 Score=123.13 Aligned_cols=126 Identities=13% Similarity=0.127 Sum_probs=92.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++..++.+|+|+|+|+++++.+++|+..+++ .+++++.+|+.+..
T Consensus 40 ~~~~VLDiG~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~----------------~~v~~~~~d~~~~~ 103 (196)
T PRK07402 40 PDSVLWDIGAGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGV----------------KNVEVIEGSAPECL 103 (196)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC----------------CCeEEEECchHHHH
Confidence 57899999999999999999877778999999999999999999988776 47999999986532
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
......+|.++.. .. ..+..+++++.++|+|||.+++.
T Consensus 104 ~~~~~~~d~v~~~-----~~-------------------------------------~~~~~~l~~~~~~LkpgG~li~~ 141 (196)
T PRK07402 104 AQLAPAPDRVCIE-----GG-------------------------------------RPIKEILQAVWQYLKPGGRLVAT 141 (196)
T ss_pred hhCCCCCCEEEEE-----CC-------------------------------------cCHHHHHHHHHHhcCCCeEEEEE
Confidence 2211245665421 00 00237799999999999999998
Q ss_pred eCCCCcHHHHHHHHHHC---CCeEEEE
Q 043334 190 MGGRPGQGVCKRLFERR---GFRVDKL 213 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~---gf~~~~~ 213 (903)
.........+.+.+++. ++..++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (196)
T PRK07402 142 ASSLEGLYAISEGLAQLQARNIEVVQA 168 (196)
T ss_pred eecHHHHHHHHHHHHhcCCCCceEEEE
Confidence 77654444444556554 4555554
No 324
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.26 E-value=7.7e-11 Score=126.34 Aligned_cols=106 Identities=22% Similarity=0.398 Sum_probs=89.3
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..+|++|||||||.|.+++.+|+.+ +.+|+|+++|+++.+.+++.++..|++ +++++...|..+
T Consensus 70 L~~G~~lLDiGCGWG~l~~~aA~~y-~v~V~GvTlS~~Q~~~~~~r~~~~gl~---------------~~v~v~l~d~rd 133 (283)
T COG2230 70 LKPGMTLLDIGCGWGGLAIYAAEEY-GVTVVGVTLSEEQLAYAEKRIAARGLE---------------DNVEVRLQDYRD 133 (283)
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHc-CCEEEEeeCCHHHHHHHHHHHHHcCCC---------------cccEEEeccccc
Confidence 4579999999999999999999998 889999999999999999999988883 689999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
... +||.||| +. +- ...|.+.+..+|+.+.++|+|||.++
T Consensus 134 ~~e----~fDrIvS------------vg--mf----------------------Ehvg~~~~~~ff~~~~~~L~~~G~~l 173 (283)
T COG2230 134 FEE----PFDRIVS------------VG--MF----------------------EHVGKENYDDFFKKVYALLKPGGRML 173 (283)
T ss_pred ccc----ccceeee------------hh--hH----------------------HHhCcccHHHHHHHHHhhcCCCceEE
Confidence 743 5999985 11 11 12344557799999999999999999
Q ss_pred EE
Q 043334 188 FN 189 (903)
Q Consensus 188 ~~ 189 (903)
+.
T Consensus 174 lh 175 (283)
T COG2230 174 LH 175 (283)
T ss_pred EE
Confidence 83
No 325
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=99.25 E-value=6.3e-11 Score=128.65 Aligned_cols=106 Identities=24% Similarity=0.372 Sum_probs=78.8
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
+.+|.+|||||||.|.+++.+|+++ +.+|+|+.+|++..+.+++.+...|+ .+++++..+|..+
T Consensus 60 l~~G~~vLDiGcGwG~~~~~~a~~~-g~~v~gitlS~~Q~~~a~~~~~~~gl---------------~~~v~v~~~D~~~ 123 (273)
T PF02353_consen 60 LKPGDRVLDIGCGWGGLAIYAAERY-GCHVTGITLSEEQAEYARERIREAGL---------------EDRVEVRLQDYRD 123 (273)
T ss_dssp --TT-EEEEES-TTSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTS---------------SSTEEEEES-GGG
T ss_pred CCCCCEEEEeCCCccHHHHHHHHHc-CcEEEEEECCHHHHHHHHHHHHhcCC---------------CCceEEEEeeccc
Confidence 4578999999999999999999998 78999999999999999999988887 3689999999987
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
... +||.|++- . + .+| .|...+..+++++.++|||||.++
T Consensus 124 ~~~----~fD~IvSi---------~-~----~Eh----------------------vg~~~~~~~f~~~~~~LkpgG~~~ 163 (273)
T PF02353_consen 124 LPG----KFDRIVSI---------E-M----FEH----------------------VGRKNYPAFFRKISRLLKPGGRLV 163 (273)
T ss_dssp -------S-SEEEEE---------S-E----GGG----------------------TCGGGHHHHHHHHHHHSETTEEEE
T ss_pred cCC----CCCEEEEE---------e-c----hhh----------------------cChhHHHHHHHHHHHhcCCCcEEE
Confidence 643 89999851 1 0 111 122335689999999999999999
Q ss_pred EE
Q 043334 188 FN 189 (903)
Q Consensus 188 ~~ 189 (903)
+.
T Consensus 164 lq 165 (273)
T PF02353_consen 164 LQ 165 (273)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 326
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=99.25 E-value=6.5e-11 Score=123.65 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=82.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|+.+..+++..+ +.+|+|+|+++++++.|++|+..+++ ..+++++.+|+.+.
T Consensus 72 ~~~~VLDiG~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~---------------~~~v~~~~~d~~~~ 136 (205)
T PRK13944 72 PGMKILEVGTGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGY---------------WGVVEVYHGDGKRG 136 (205)
T ss_pred CCCEEEEECcCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---------------CCcEEEEECCcccC
Confidence 568999999999999999998764 46999999999999999999988776 24699999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... .+||+|+++.... .+.+++.+.|+|||++++
T Consensus 137 ~~~~-~~fD~Ii~~~~~~--------------------------------------------~~~~~l~~~L~~gG~lvi 171 (205)
T PRK13944 137 LEKH-APFDAIIVTAAAS--------------------------------------------TIPSALVRQLKDGGVLVI 171 (205)
T ss_pred CccC-CCccEEEEccCcc--------------------------------------------hhhHHHHHhcCcCcEEEE
Confidence 5433 4899998652211 223466788999999998
Q ss_pred EeCC
Q 043334 189 NMGG 192 (903)
Q Consensus 189 ~~~~ 192 (903)
..+.
T Consensus 172 ~~~~ 175 (205)
T PRK13944 172 PVEE 175 (205)
T ss_pred EEcC
Confidence 7654
No 327
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.25 E-value=1.3e-09 Score=126.70 Aligned_cols=269 Identities=10% Similarity=0.058 Sum_probs=164.8
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCC---CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSE---SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~---G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..|...||+..|- ..++ .++.+.+++.+.+.+..... -..+....+++.+.+..+...+ .++++++++++.
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~---~v~f~~SGseA~ 116 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLD---CFFFSNSGAEAI 116 (433)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC---EEEEeCcHHHHH
Confidence 4677899997663 3444 56789999988887642211 1345567788888776532222 788888888877
Q ss_pred HHHHHHhcc-CC-CeEEEcCCCcHHHH-HHHHHcCC-------------EEEEecCCCCC--Ccc--------cCHHHHH
Q 043334 686 NKLVLCCIL-EG-GTLCFPAGSNGNYV-SAARFLKA-------------NIVNIPTESEV--GFK--------MTEKTLV 739 (903)
Q Consensus 686 ~~ll~~l~~-pG-D~Vlv~~P~y~~~~-~~~~~~G~-------------~vv~v~~~~~~--~f~--------ld~~~L~ 739 (903)
..++..... .| ..|+...-+|-+.. ......+. .+..+|..... .+. -+++.++
T Consensus 117 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 196 (433)
T PRK08117 117 EGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLE 196 (433)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHH
Confidence 777764221 22 45666666554422 22211110 11222221100 000 1455666
Q ss_pred HHhhc---CCCcEEEEECCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCC
Q 043334 740 TILET---VKKPWVYISGPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSST 815 (903)
Q Consensus 740 ~~l~~---~~~~~vil~~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~ 815 (903)
+.++. ....+.++.-|-+.-.|.+ .+.+.+++|.++|++||+++|.||+|.++...|... . ....+-
T Consensus 197 ~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~---~----~~~~gv-- 267 (433)
T PRK08117 197 SLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWF---A----AQTFGV-- 267 (433)
T ss_pred HHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccch---h----HhhcCC--
Confidence 66542 1223566666764555665 578999999999999999999999998765555431 1 111111
Q ss_pred CCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHH
Q 043334 816 NSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRN 893 (903)
Q Consensus 816 ~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~ 893 (903)
..-+.+|||.+| +|+++|+++++++ +++.+..... +.+.+++.+.++.+.|+.-.. +.+.+.+.++.+.
T Consensus 268 -----~pDi~t~sK~lg-~G~pigav~~~~~-i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~ 338 (433)
T PRK08117 268 -----VPDIMTIAKGIA-SGLPLSAVVASKE-LMEQWPLGSHGTTFGGNPVACAAALATLEVIKE--EKLLDNANEMGAY 338 (433)
T ss_pred -----CCCEeehhhhcc-CCCcceeEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence 122479999998 8999999999887 8888754322 566788899999999852211 2345566666666
Q ss_pred HHHHHHHH
Q 043334 894 LESRSKRL 901 (903)
Q Consensus 894 y~~Rr~~l 901 (903)
++++.+.+
T Consensus 339 l~~~L~~l 346 (433)
T PRK08117 339 ALERLEVL 346 (433)
T ss_pred HHHHHHHH
Confidence 66665543
No 328
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.25 E-value=1.3e-10 Score=134.44 Aligned_cols=160 Identities=10% Similarity=0.063 Sum_probs=122.7
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHH----HHHHHcCCEEEEecC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYV----SAARFLKANIVNIPT 725 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~----~~~~~~G~~vv~v~~ 725 (903)
..+..+.+++.+++..|.+ . .|++++|+ +++..++.+++++||+|+++...|+... ..++..|++++.++
T Consensus 67 ~~pt~~~le~~la~l~g~~-~---~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 67 TNPTVEALENRIASLEGGV-H---AVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred cChHHHHHHHHHHHHhCCC-e---EEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 3455778888888888864 2 58888887 6666777788899999999999999874 34577899999997
Q ss_pred CCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchh
Q 043334 726 ESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLE 805 (903)
Q Consensus 726 ~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~ 805 (903)
+. .|++.+++++++++ ++|++.+|. ||+|.+.+ +++|.++|+++|+++|+|.+++.-.. ..
T Consensus 141 ~~-----~d~e~l~~~l~~~t-k~V~~e~~~-Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~--~~------- 201 (437)
T PRK05613 141 NP-----DDPESWQAAVQPNT-KAFFGETFA-NPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL--VR------- 201 (437)
T ss_pred CC-----CCHHHHHHhCCccC-eEEEEECCC-CCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc--cC-------
Confidence 32 27899999998887 488889998 99998888 88889999999999999999843111 00
Q ss_pred hhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 806 GCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 806 ~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
+ .. . +..+++.|++|.++..|.-+|-+++
T Consensus 202 p-~~----~----GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 202 P-LE----L----GADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred h-HH----h----CCCEEEeeccceecCCCcceeEEEE
Confidence 1 11 1 2578999999999876766665554
No 329
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A.
Probab=99.24 E-value=1.8e-11 Score=112.73 Aligned_cols=98 Identities=21% Similarity=0.394 Sum_probs=72.5
Q ss_pred EEEeCCccCHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc
Q 043334 34 VAELGCGNGWITIAIAEKW---LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR 110 (903)
Q Consensus 34 VLDlGCGtG~lsi~la~~~---~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~ 110 (903)
|||+|||+|..+..+++.+ +..+++|+|+|++|++.++++....+. +++++++|+.++..
T Consensus 1 ILDlgcG~G~~~~~l~~~~~~~~~~~~~gvD~s~~~l~~~~~~~~~~~~-----------------~~~~~~~D~~~l~~ 63 (101)
T PF13649_consen 1 ILDLGCGTGRVTRALARRFDAGPSSRVIGVDISPEMLELAKKRFSEDGP-----------------KVRFVQADARDLPF 63 (101)
T ss_dssp -EEET-TTSHHHHHHHHHS-----SEEEEEES-HHHHHHHHHHSHHTTT-----------------TSEEEESCTTCHHH
T ss_pred CEEeecCCcHHHHHHHHHhhhcccceEEEEECCHHHHHHHHHhchhcCC-----------------ceEEEECCHhHCcc
Confidence 7999999999999999886 347999999999999999998865443 78999999998764
Q ss_pred CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc
Q 043334 111 DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG 184 (903)
Q Consensus 111 ~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG 184 (903)
.. ++||+|+++ .....++. .+....+++++.++|||||
T Consensus 64 ~~-~~~D~v~~~-----~~~~~~~~------------------------------~~~~~~ll~~~~~~l~pgG 101 (101)
T PF13649_consen 64 SD-GKFDLVVCS-----GLSLHHLS------------------------------PEELEALLRRIARLLRPGG 101 (101)
T ss_dssp HS-SSEEEEEE------TTGGGGSS------------------------------HHHHHHHHHHHHHTEEEEE
T ss_pred cC-CCeeEEEEc-----CCccCCCC------------------------------HHHHHHHHHHHHHHhCCCC
Confidence 43 499999962 01011111 1223488999999999998
No 330
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=99.24 E-value=1.7e-10 Score=133.69 Aligned_cols=149 Identities=16% Similarity=0.112 Sum_probs=104.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|..+..+++..++.+|+|+|+++.+++.+++|+..+|+ +++++++|+.++
T Consensus 243 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~-----------------~~~~~~~D~~~~ 305 (427)
T PRK10901 243 QNGERVLDACAAPGGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGL-----------------KATVIVGDARDP 305 (427)
T ss_pred CCCCEEEEeCCCCChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCC-----------------CeEEEEcCcccc
Confidence 367899999999999999999987667999999999999999999988876 478999999865
Q ss_pred ccC-CCCceeEEEECCCCCCCCCccchhhHHhh-hhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 109 CRD-HDIQLERIVGCIPQILNPNPDAMSKIITE-NASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 109 ~~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~-~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
... ..++||.|++|||+........-+ ++.. ..++.. .........+++.+.+.|||||++
T Consensus 306 ~~~~~~~~fD~Vl~D~Pcs~~G~~~~~p-~~~~~~~~~~l----------------~~l~~~q~~iL~~a~~~LkpGG~l 368 (427)
T PRK10901 306 AQWWDGQPFDRILLDAPCSATGVIRRHP-DIKWLRRPEDI----------------AALAALQSEILDALWPLLKPGGTL 368 (427)
T ss_pred hhhcccCCCCEEEECCCCCcccccccCc-cccccCCHHHH----------------HHHHHHHHHHHHHHHHhcCCCCEE
Confidence 321 123799999999987432211100 0000 000000 001133558999999999999999
Q ss_pred EEEeCC---CCcHHHHHHHHHHC-CCeEE
Q 043334 187 IFNMGG---RPGQGVCKRLFERR-GFRVD 211 (903)
Q Consensus 187 l~~~~~---~~~~~~l~~ll~~~-gf~~~ 211 (903)
++.+.+ ......+...++++ +|+..
T Consensus 369 vystcs~~~~Ene~~v~~~l~~~~~~~~~ 397 (427)
T PRK10901 369 LYATCSILPEENEQQIKAFLARHPDAELL 397 (427)
T ss_pred EEEeCCCChhhCHHHHHHHHHhCCCCEEe
Confidence 986643 33445656677665 46543
No 331
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=99.23 E-value=6.9e-11 Score=124.35 Aligned_cols=78 Identities=21% Similarity=0.115 Sum_probs=66.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++++++.|++|+..+++ ++++++++|..+
T Consensus 76 ~~~~~VLDiG~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~----------------~~v~~~~~d~~~ 139 (215)
T TIGR00080 76 KPGMKVLEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGL----------------DNVIVIVGDGTQ 139 (215)
T ss_pred CCcCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCC----------------CCeEEEECCccc
Confidence 4678999999999999999999864 35799999999999999999988876 479999999987
Q ss_pred cccCCCCceeEEEECC
Q 043334 108 YCRDHDIQLERIVGCI 123 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~Np 123 (903)
..... .+||+|+.++
T Consensus 140 ~~~~~-~~fD~Ii~~~ 154 (215)
T TIGR00080 140 GWEPL-APYDRIYVTA 154 (215)
T ss_pred CCccc-CCCCEEEEcC
Confidence 54333 3899998653
No 332
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=99.23 E-value=1e-10 Score=137.76 Aligned_cols=127 Identities=17% Similarity=0.165 Sum_probs=94.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++.. +.+|+|+|+|++|++.|++|.... ..++++.++|+.+..
T Consensus 266 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvDiS~~~l~~A~~~~~~~-----------------~~~v~~~~~d~~~~~ 327 (475)
T PLN02336 266 PGQKVLDVGCGIGGGDFYMAENF-DVHVVGIDLSVNMISFALERAIGR-----------------KCSVEFEVADCTKKT 327 (475)
T ss_pred CCCEEEEEeccCCHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhhcC-----------------CCceEEEEcCcccCC
Confidence 57899999999999999999876 679999999999999999887422 247999999998865
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.+. ++||+|+++-.+...++ ..+++++++++|||||.+++.
T Consensus 328 ~~~-~~fD~I~s~~~l~h~~d--------------------------------------~~~~l~~~~r~LkpgG~l~i~ 368 (475)
T PLN02336 328 YPD-NSFDVIYSRDTILHIQD--------------------------------------KPALFRSFFKWLKPGGKVLIS 368 (475)
T ss_pred CCC-CCEEEEEECCcccccCC--------------------------------------HHHHHHHHHHHcCCCeEEEEE
Confidence 433 38999997422221110 227899999999999999985
Q ss_pred eCC--------------------CCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MGG--------------------RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~--------------------~~~~~~l~~ll~~~gf~~~~~ 213 (903)
... ......+.++++++||..+..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~aGF~~i~~ 412 (475)
T PLN02336 369 DYCRSPGTPSPEFAEYIKQRGYDLHDVQAYGQMLKDAGFDDVIA 412 (475)
T ss_pred EeccCCCCCcHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeeeee
Confidence 321 112334466777777777644
No 333
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=99.23 E-value=1e-10 Score=128.46 Aligned_cols=125 Identities=16% Similarity=0.168 Sum_probs=92.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..++.+++. +.+|+|+|+|+.|++.+++++..+++ ++++..+|+.+..
T Consensus 120 ~~~~vLDlGcG~G~~~~~la~~--g~~V~avD~s~~ai~~~~~~~~~~~l-----------------~v~~~~~D~~~~~ 180 (287)
T PRK12335 120 KPGKALDLGCGQGRNSLYLALL--GFDVTAVDINQQSLENLQEIAEKENL-----------------NIRTGLYDINSAS 180 (287)
T ss_pred CCCCEEEeCCCCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCC-----------------ceEEEEechhccc
Confidence 4569999999999999999986 68999999999999999999877765 6888889987754
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. .++||+|+++..+...+ .+....+++++.++|+|||.+++.
T Consensus 181 ~--~~~fD~I~~~~vl~~l~------------------------------------~~~~~~~l~~~~~~LkpgG~~l~v 222 (287)
T PRK12335 181 I--QEEYDFILSTVVLMFLN------------------------------------RERIPAIIKNMQEHTNPGGYNLIV 222 (287)
T ss_pred c--cCCccEEEEcchhhhCC------------------------------------HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3 33899999764433211 011337899999999999997663
Q ss_pred eC-------------CCCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MG-------------GRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~-------------~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.. .......++++++ +|++...
T Consensus 223 ~~~~~~~~~~~~p~~~~~~~~el~~~~~--~~~i~~~ 257 (287)
T PRK12335 223 CAMDTEDYPCPMPFSFTFKEGELKDYYQ--DWEIVKY 257 (287)
T ss_pred EecccccCCCCCCCCcccCHHHHHHHhC--CCEEEEE
Confidence 21 1234455556664 3777665
No 334
>COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair]
Probab=99.23 E-value=9.8e-11 Score=127.94 Aligned_cols=155 Identities=23% Similarity=0.260 Sum_probs=118.1
Q ss_pred cCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCC
Q 043334 4 IPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKG 83 (903)
Q Consensus 4 ~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~ 83 (903)
.|+.+.| -..+...+|.+.. +|..|||.-||||.+.+.+... |++++|+|++..|++-|+.|+...++
T Consensus 177 ~p~s~~P--~lAR~mVNLa~v~----~G~~vlDPFcGTGgiLiEagl~--G~~viG~Did~~mv~gak~Nl~~y~i---- 244 (347)
T COG1041 177 RPGSMDP--RLARAMVNLARVK----RGELVLDPFCGTGGILIEAGLM--GARVIGSDIDERMVRGAKINLEYYGI---- 244 (347)
T ss_pred CcCCcCH--HHHHHHHHHhccc----cCCEeecCcCCccHHHHhhhhc--CceEeecchHHHHHhhhhhhhhhhCc----
Confidence 3555555 3344445566554 5899999999999999997655 89999999999999999999988876
Q ss_pred CCcchhhhcccCCcEEEEEc-cccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccc
Q 043334 84 QPIYDAEKKTLLDRVEFHES-DLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVED 162 (903)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~g-Dl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~ 162 (903)
....++.. |+..++.... ++|.|++.|||-.......
T Consensus 245 ------------~~~~~~~~~Da~~lpl~~~-~vdaIatDPPYGrst~~~~----------------------------- 282 (347)
T COG1041 245 ------------EDYPVLKVLDATNLPLRDN-SVDAIATDPPYGRSTKIKG----------------------------- 282 (347)
T ss_pred ------------CceeEEEecccccCCCCCC-ccceEEecCCCCccccccc-----------------------------
Confidence 35656666 9988875543 6999999999986543221
Q ss_pred cccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 163 QFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 163 ~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
..-.++++++++.+.++||+||.++|-.+... ...+.+.||++...+..+
T Consensus 283 ~~l~~Ly~~~le~~~evLk~gG~~vf~~p~~~-----~~~~~~~~f~v~~~~~~~ 332 (347)
T COG1041 283 EGLDELYEEALESASEVLKPGGRIVFAAPRDP-----RHELEELGFKVLGRFTMR 332 (347)
T ss_pred ccHHHHHHHHHHHHHHHhhcCcEEEEecCCcc-----hhhHhhcCceEEEEEEEe
Confidence 11235678999999999999999999877221 236778899998886655
No 335
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=99.23 E-value=2.6e-10 Score=123.73 Aligned_cols=147 Identities=13% Similarity=0.129 Sum_probs=102.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.+++|++.+++ .+++++++|...+
T Consensus 71 ~g~~VLDl~ag~G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~----------------~~v~~~~~D~~~~ 134 (264)
T TIGR00446 71 PPERVLDMAAAPGGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGV----------------LNVAVTNFDGRVF 134 (264)
T ss_pred CcCEEEEECCCchHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC----------------CcEEEecCCHHHh
Confidence 6789999999999999999987643 5999999999999999999998887 4799999998776
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||.|+.|||+....-...-+.....+.++.. ..-......+++.+.+.|||||+++.
T Consensus 135 ~~~~-~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~----------------~~l~~~q~~iL~~a~~~lkpgG~lvY 197 (264)
T TIGR00446 135 GAAV-PKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDI----------------QEISALQKELIDSAFDALKPGGVLVY 197 (264)
T ss_pred hhhc-cCCCEEEEcCCCCCCcccccChhhhhcCCHHHH----------------HHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4332 369999999998743322111110000000000 00012344799999999999999998
Q ss_pred EeCCCC---cHHHHHHHHHHC-CCe
Q 043334 189 NMGGRP---GQGVCKRLFERR-GFR 209 (903)
Q Consensus 189 ~~~~~~---~~~~l~~ll~~~-gf~ 209 (903)
.+.+.. ....++..+++. ++.
T Consensus 198 stcs~~~~Ene~vv~~~l~~~~~~~ 222 (264)
T TIGR00446 198 STCSLEPEENEAVVDYLLEKRPDVV 222 (264)
T ss_pred EeCCCChHHHHHHHHHHHHhCCCcE
Confidence 765543 344666666664 344
No 336
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.23 E-value=7.4e-11 Score=127.38 Aligned_cols=188 Identities=15% Similarity=0.208 Sum_probs=117.7
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccC--C----CeEEEcCCCcHHHHHHHHHcCCEEEEec
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILE--G----GTLCFPAGSNGNYVSAARFLKANIVNIP 724 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~p--G----D~Vlv~~P~y~~~~~~~~~~G~~vv~v~ 724 (903)
++|.+.|++.-.. -|-....+..|++++|+++++..++.+|... . -.|+...|.|+.|........-......
T Consensus 46 ~eL~~~Ir~LH~~-VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 46 PELERQIRRLHRV-VGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp HHHHHHHHHHHHH-H-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred HHHHHHHHHHHHH-hccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 5555555554433 3544444669999999999999999998644 1 2799999999999998866654444433
Q ss_pred CCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCch
Q 043334 725 TESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDL 804 (903)
Q Consensus 725 ~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~ 804 (903)
-+. ..|. .. +....-+=++++|| ||.|.+ .+.++ +..+..+|.|-+|..-.|.+-..
T Consensus 125 Gda-~~~~-------~~-~~~~~~IElVTSPN-NPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTpI~~----- 181 (363)
T PF04864_consen 125 GDA-SNFK-------NS-DNPSPYIELVTSPN-NPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTPITA----- 181 (363)
T ss_dssp EEC-CCGT-------T--S-CCGEEEEEESS--TTT-----------SS---TTTEEEEEEE-TT-STTTS---S-----
T ss_pred ccH-Hhhc-------cC-CCCCCeEEEEeCCC-CCcccc-----cchhc---CCCCcceeeeeeeecccccccCC-----
Confidence 322 2232 00 00122367899999 999988 44444 56677789999996544433221
Q ss_pred hhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 805 EGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 805 ~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
+.|..|.+.|+||.-|-+|-|+||++..++++.++|.++.. +.++|.=+|.-+.++|.
T Consensus 182 ------------~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk 241 (363)
T PF04864_consen 182 ------------PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILK 241 (363)
T ss_dssp -------------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHH
T ss_pred ------------CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 12578999999999999999999999999989999988764 88999999999999983
No 337
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=99.22 E-value=9.8e-11 Score=126.11 Aligned_cols=112 Identities=19% Similarity=0.283 Sum_probs=84.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++. ....++++|+.+++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~~D~s~~~l~~a~~~~---------------------~~~~~~~~d~~~~~ 98 (251)
T PRK10258 42 KFTHVLDAGCGPGWMSRYWRER--GSQVTALDLSPPMLAQARQKD---------------------AADHYLAGDIESLP 98 (251)
T ss_pred CCCeEEEeeCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhC---------------------CCCCEEEcCcccCc
Confidence 4678999999999999998875 689999999999999998774 13467889998865
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|++|.+....++ ...++.++.++|+|||.+++.
T Consensus 99 ~~~-~~fD~V~s~~~l~~~~d--------------------------------------~~~~l~~~~~~Lk~gG~l~~~ 139 (251)
T PRK10258 99 LAT-ATFDLAWSNLAVQWCGN--------------------------------------LSTALRELYRVVRPGGVVAFT 139 (251)
T ss_pred CCC-CcEEEEEECchhhhcCC--------------------------------------HHHHHHHHHHHcCCCeEEEEE
Confidence 443 38999998754432111 226799999999999999997
Q ss_pred eCCCCcHHHHHHHH
Q 043334 190 MGGRPGQGVCKRLF 203 (903)
Q Consensus 190 ~~~~~~~~~l~~ll 203 (903)
.........+.+..
T Consensus 140 ~~~~~~~~el~~~~ 153 (251)
T PRK10258 140 TLVQGSLPELHQAW 153 (251)
T ss_pred eCCCCchHHHHHHH
Confidence 65544434433333
No 338
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.21 E-value=4.3e-09 Score=120.31 Aligned_cols=185 Identities=16% Similarity=0.224 Sum_probs=123.4
Q ss_pred HHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH-HHHHHHcCCEEEEecCC--------
Q 043334 656 SIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY-VSAARFLKANIVNIPTE-------- 726 (903)
Q Consensus 656 ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~-~~~~~~~G~~vv~v~~~-------- 726 (903)
.+++.+++++|.+ .++.++.++.++.++....++|||.| +..+|... ...+...|+..+.+..+
T Consensus 82 ~LE~~vAe~lG~e-----~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~ 154 (460)
T PRK13237 82 HLEETVQEYYGFK-----HVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSD 154 (460)
T ss_pred HHHHHHHHHHCCC-----eEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccC
Confidence 3455555556765 35666666666666677778999965 55545444 44478888866555322
Q ss_pred CCCCcccCHHHHHHHhhcCCC---cEEEEECCCCCCc-ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCC--ccC---CC
Q 043334 727 SEVGFKMTEKTLVTILETVKK---PWVYISGPTINPT-GLLYSNKEIENILTVCAKYGARVVIDTAFSGL--EFN---YE 797 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~---~~vil~~P~~NPT-G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l--~f~---~~ 797 (903)
....+++|++++++++++++. +++.+.+++ |-. |...|.+++++|.++|+++|+.||+|-+...- .|- ..
T Consensus 155 ~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itv-n~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~ 233 (460)
T PRK13237 155 HPFKGNVDLDKLQALIDEVGAENIAYICLAVTV-NLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREE 233 (460)
T ss_pred CCCCCCcCHHHHHHHhccccCCccCceEEEEec-ccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhccccc
Confidence 124678999999999986432 357788887 888 79999999999999999999999999987411 111 00
Q ss_pred CCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhC
Q 043334 798 GWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 798 ~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~ 855 (903)
.....++......+.. .-.+...|++|.++.+- -|+++.+++++.++++..
T Consensus 234 ~y~~~~i~ei~~e~~s-----~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~ 284 (460)
T PRK13237 234 GYQDKSIKEIVHEMFS-----YADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKEL 284 (460)
T ss_pred ccCCCcHhHHhhhccC-----cCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHh
Confidence 0100111111222222 24567888999997651 389999999899999876
No 339
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.21 E-value=6.5e-10 Score=126.66 Aligned_cols=168 Identities=13% Similarity=0.142 Sum_probs=120.0
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH----HHHHHHcCCEEEEecC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY----VSAARFLKANIVNIPT 725 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~ 725 (903)
..+..+++++.+++..|.+ ..++++++++++..++.+++++||+|+++.+.|+.. ...+...|++++.+++
T Consensus 62 ~~P~~~~lE~~la~leg~~-----~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~ 136 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENAE-----HALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDT 136 (384)
T ss_pred CChhHHHHHHHHHHHhCCC-----cEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECC
Confidence 3456778888888887764 345555556899988999999999999998765554 4566788999999998
Q ss_pred CCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchh
Q 043334 726 ESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLE 805 (903)
Q Consensus 726 ~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~ 805 (903)
++.+.+.+++ +++ ++|++.+|+ |||+.+.+ +++|.++|++++ +++|.++.. .+.+.+
T Consensus 137 ~~~~~~~l~~--------~~t-klv~~e~~s-npt~~v~D---i~~I~~la~~~~--lvVD~t~~s-~~~~~p------- 193 (384)
T PRK06434 137 DRLNSLDFDP--------SNY-DLIYAESIT-NPTLKVPD---IKNVSSFCHEND--VIVDATFAS-PYNQNP------- 193 (384)
T ss_pred CChhheeecC--------CCe-eEEEEEcCC-CCCceeec---HHHHHHHHHHcC--eEEECCCCC-cccCCc-------
Confidence 6533443322 134 589999999 99999865 888899999998 455999731 122221
Q ss_pred hhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhC
Q 043334 806 GCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 806 ~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~ 855 (903)
+. . +-.+++.|.+|.++.+| .=.|.++++++++.+.+...
T Consensus 194 --l~----~----gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~ 234 (384)
T PRK06434 194 --LD----L----GADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVER 234 (384)
T ss_pred --hh----c----CCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHH
Confidence 11 1 35789999999997545 44677777666577766644
No 340
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=99.21 E-value=4.2e-10 Score=131.09 Aligned_cols=148 Identities=16% Similarity=0.176 Sum_probs=105.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|..+..+++..+ +.+|+|+|+|+.+++.+++|+...|+ .+++++++|+.+
T Consensus 249 ~~g~~VLDlgaG~G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~----------------~~v~~~~~Da~~ 312 (445)
T PRK14904 249 QPGSTVLDLCAAPGGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGI----------------TIIETIEGDARS 312 (445)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCC----------------CeEEEEeCcccc
Confidence 3578999999999999999988654 45999999999999999999988887 479999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhh-hhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITE-NASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~-~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+... .+||+|+.+||+....-...-+ +... ..++.+ ..-......+++.+.++|||||++
T Consensus 313 ~~~~--~~fD~Vl~D~Pcsg~g~~~r~p-~~~~~~~~~~~----------------~~l~~~q~~iL~~a~~~lkpgG~l 373 (445)
T PRK14904 313 FSPE--EQPDAILLDAPCTGTGVLGRRA-ELRWKLTPEKL----------------AELVGLQAELLDHAASLLKPGGVL 373 (445)
T ss_pred cccC--CCCCEEEEcCCCCCcchhhcCc-chhhcCCHHHH----------------HHHHHHHHHHHHHHHHhcCCCcEE
Confidence 7533 3799999999986433211100 0000 000000 000123447899999999999999
Q ss_pred EEEeCCCC---cHHHHHHHHHHC-CCeEE
Q 043334 187 IFNMGGRP---GQGVCKRLFERR-GFRVD 211 (903)
Q Consensus 187 l~~~~~~~---~~~~l~~ll~~~-gf~~~ 211 (903)
++.+.+.. ....++..++.+ +|...
T Consensus 374 vystcs~~~~Ene~~v~~~l~~~~~~~~~ 402 (445)
T PRK14904 374 VYATCSIEPEENELQIEAFLQRHPEFSAE 402 (445)
T ss_pred EEEeCCCChhhHHHHHHHHHHhCCCCEEe
Confidence 99776543 445667778776 46543
No 341
>PRK04266 fibrillarin; Provisional
Probab=99.20 E-value=2.2e-10 Score=121.08 Aligned_cols=129 Identities=16% Similarity=0.144 Sum_probs=92.7
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
+.++.+|||+|||+|.++..+++..+..+|+|+|+++.|++.+.++++.. .++.++.+|..+
T Consensus 70 i~~g~~VlD~G~G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~------------------~nv~~i~~D~~~ 131 (226)
T PRK04266 70 IKKGSKVLYLGAASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEER------------------KNIIPILADARK 131 (226)
T ss_pred CCCCCEEEEEccCCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhc------------------CCcEEEECCCCC
Confidence 34678999999999999999999876569999999999999887776432 368899999875
Q ss_pred cc--cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 108 YC--RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 108 ~~--~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
.. .....+||+|+++.+. + .....+++++.++|||||.
T Consensus 132 ~~~~~~l~~~~D~i~~d~~~---------p-------------------------------~~~~~~L~~~~r~LKpGG~ 171 (226)
T PRK04266 132 PERYAHVVEKVDVIYQDVAQ---------P-------------------------------NQAEIAIDNAEFFLKDGGY 171 (226)
T ss_pred cchhhhccccCCEEEECCCC---------h-------------------------------hHHHHHHHHHHHhcCCCcE
Confidence 31 1111369999854210 0 0012568999999999999
Q ss_pred EEEEeCC-----CCcH----HHHHHHHHHCCCeEEEEE
Q 043334 186 MIFNMGG-----RPGQ----GVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 186 ll~~~~~-----~~~~----~~l~~ll~~~gf~~~~~~ 214 (903)
+++.+.. .... ....+++++.||+.++..
T Consensus 172 lvI~v~~~~~d~~~~~~~~~~~~~~~l~~aGF~~i~~~ 209 (226)
T PRK04266 172 LLLAIKARSIDVTKDPKEIFKEEIRKLEEGGFEILEVV 209 (226)
T ss_pred EEEEEecccccCcCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 9994221 1111 123478999999988774
No 342
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.20 E-value=4.9e-10 Score=122.09 Aligned_cols=247 Identities=15% Similarity=0.095 Sum_probs=164.6
Q ss_pred CCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCC
Q 043334 625 SFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAG 704 (903)
Q Consensus 625 p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P 704 (903)
+.-.+.+.+.+++.++-..+...||..+...++++++++.+|. . .+++..+++++....+.+.++||+.|++..-
T Consensus 8 n~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~-~----a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~ 82 (342)
T COG2008 8 NVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK-E----AALFVPSGTQANQLALAAHCQPGESVICHET 82 (342)
T ss_pred ccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC-c----eEEEecCccHHHHHHHHHhcCCCCeEEEecc
Confidence 3345778899998887545667899999999999999999998 3 3666666666666778889999999999887
Q ss_pred CcHHHHH--HHHHc-CCEEEEecCCCCCCcccCHHHHHHHhhcC-----CCcEEEEECCCCCCcccCCCHHHHHHHHHHH
Q 043334 705 SNGNYVS--AARFL-KANIVNIPTESEVGFKMTEKTLVTILETV-----KKPWVYISGPTINPTGLLYSNKEIENILTVC 776 (903)
Q Consensus 705 ~y~~~~~--~~~~~-G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-----~~~~vil~~P~~NPTG~v~s~eel~eI~~ia 776 (903)
.+..... ....+ |+..+ +..+..+..+++++++..+.+. ..+++++.+.. |--|++||.+++++|.++|
T Consensus 83 aHi~~~E~Ga~~~~~~~~~~--~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~-te~GtVy~l~el~~i~~~~ 159 (342)
T COG2008 83 AHIYTDECGAPEFFGGGQKL--PIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTA-TEGGTVYPLDELEAISAVC 159 (342)
T ss_pred ccceecccCcHHHHcCCcee--ccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeecc-CCCceecCHHHHHHHHHHH
Confidence 7654322 22333 33333 3333345679999999977642 23466666554 6679999999999999999
Q ss_pred HhCCcEEEEecCCC--CCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHh
Q 043334 777 AKYGARVVIDTAFS--GLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 777 ~k~~i~VI~DeaY~--~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~ 854 (903)
+++|+.|..|-+-- -+...+.. ...... ...++..++||..+.|+ |-++..+.++++.+..
T Consensus 160 k~~~l~LHmDGAR~~nA~valg~~---------~~~~~~-----~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~ 222 (342)
T COG2008 160 KEHGLPLHMDGARLANALVALGVA---------LKTIKS-----YVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARR 222 (342)
T ss_pred HHhCCceeechHHHHHHHHHcCCC---------HHHHHh-----hCCEEEEecccCCccee---eeEEEcCHHHHHHHHH
Confidence 99999999998641 12222211 111222 25667788999886665 9888877779988876
Q ss_pred CCC----CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 855 FPG----LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 855 ~~~----~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
... ...-+.+.-.....+|+ +........|-..+.+.+.+..
T Consensus 223 ~rK~~Ggl~~k~r~laA~~~~~l~--~~~~~~~~~Han~mA~~La~~~ 268 (342)
T COG2008 223 WRKRAGGLMRKARFLAAQGLYALE--DDVWRLAADHANAMAARLAEGL 268 (342)
T ss_pred HHHHhcccHhhhhHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHhh
Confidence 542 34445555566666663 3211222344444455554443
No 343
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=99.20 E-value=4.1e-10 Score=130.28 Aligned_cols=150 Identities=17% Similarity=0.137 Sum_probs=106.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|..+..++...+ +.+|+|+|+++.+++.+++|+...|+ .++++.++|...
T Consensus 236 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~----------------~~v~~~~~Da~~ 299 (431)
T PRK14903 236 EPGLRVLDTCAAPGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKL----------------SSIEIKIADAER 299 (431)
T ss_pred CCCCEEEEeCCCccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCC----------------CeEEEEECchhh
Confidence 3678999999999999999998763 56999999999999999999998887 468999999987
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
+.....++||.|+++||+.........+ ++....+.+-. ..-..+..++++.+.+.|||||.++
T Consensus 300 l~~~~~~~fD~Vl~DaPCsg~G~~~~~p-~~~~~~~~~~~---------------~~l~~~Q~~iL~~a~~~LkpGG~Lv 363 (431)
T PRK14903 300 LTEYVQDTFDRILVDAPCTSLGTARNHP-EVLRRVNKEDF---------------KKLSEIQLRIVSQAWKLLEKGGILL 363 (431)
T ss_pred hhhhhhccCCEEEECCCCCCCccccCCh-HHHHhCCHHHH---------------HHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 6422234799999999997544322111 11111000000 0011245688999999999999999
Q ss_pred EEeCCC---CcHHHHHHHHHHC-CCeE
Q 043334 188 FNMGGR---PGQGVCKRLFERR-GFRV 210 (903)
Q Consensus 188 ~~~~~~---~~~~~l~~ll~~~-gf~~ 210 (903)
+.+.+. .....+++.++++ +|..
T Consensus 364 YsTCs~~~eEne~vv~~fl~~~~~~~~ 390 (431)
T PRK14903 364 YSTCTVTKEENTEVVKRFVYEQKDAEV 390 (431)
T ss_pred EEECCCChhhCHHHHHHHHHhCCCcEE
Confidence 876653 3455666666654 4654
No 344
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.20 E-value=1.2e-09 Score=125.90 Aligned_cols=191 Identities=14% Similarity=0.070 Sum_probs=133.5
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHccCC------C---CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQNM------S---ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~------~---~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
++.+.|+.+.-. ++|+.+.+++.+.+..+.. . .+.....+++++ + +.+|.+. + +|++|+|+++++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~--~-~v~~~~~~t~~l 99 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKE--D-EVVVMNTLTINL 99 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCC--C-cEEEeCCchHHH
Confidence 568999977655 4588888888776654321 1 122233344444 3 5677653 3 899999999999
Q ss_pred HHHHHHhccCCC---eEEEcCCCcHHH----HHHHHHcCCEE----EEecCCCCCCcccCHHHHHHHhh---cCCCcEEE
Q 043334 686 NKLVLCCILEGG---TLCFPAGSNGNY----VSAARFLKANI----VNIPTESEVGFKMTEKTLVTILE---TVKKPWVY 751 (903)
Q Consensus 686 ~~ll~~l~~pGD---~Vlv~~P~y~~~----~~~~~~~G~~v----v~v~~~~~~~f~ld~~~L~~~l~---~~~~~~vi 751 (903)
+.++.+++++|+ .|++....|+.. ...++..|+++ +.++.+ +++.+|++.+++.++ +++ ++|+
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~--~~g~~~~~~l~~~~~~~~~~t-~lv~ 176 (406)
T TIGR01814 100 HLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPR--EEETLRLEDILDTIEKNGDDI-AVIL 176 (406)
T ss_pred HHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccC--CCCccCHHHHHHHHHhcCCCe-EEEE
Confidence 999988876653 688888889873 23456778887 455553 345578899988774 445 4899
Q ss_pred EECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 752 ISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 752 l~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
+++++ |.||.+++ +++|.++|+++|+++++|.+.+. +..+ ++ +... +..+++.|..|.+
T Consensus 177 ~~~v~-~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~---G~~~---id-------~~~~----gvD~~~~s~hK~l 235 (406)
T TIGR01814 177 LSGVQ-YYTGQLFD---MAAITRAAHAKGALVGFDLAHAV---GNVP---LD-------LHDW----GVDFACWCTYKYL 235 (406)
T ss_pred Eeccc-cccceecC---HHHHHHHHHHcCCEEEEEccccc---CCcc---cc-------cccC----CCCEEEEcCcccc
Confidence 99998 99999998 88899999999999999998853 1111 11 1111 3578999999976
Q ss_pred -cccc
Q 043334 832 -LTGA 835 (903)
Q Consensus 832 -g~~G 835 (903)
|.||
T Consensus 236 ~g~pG 240 (406)
T TIGR01814 236 NAGPG 240 (406)
T ss_pred CCCCC
Confidence 3456
No 345
>TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU. Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d.
Probab=99.19 E-value=2.8e-10 Score=126.27 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=82.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++++|+.+++++|+ +.+++.+++|+...++ .++++++.+|+.+..
T Consensus 149 ~~~~vlDiG~G~G~~~~~~~~~~p~~~~~~~D~-~~~~~~a~~~~~~~gl---------------~~rv~~~~~d~~~~~ 212 (306)
T TIGR02716 149 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV---------------ADRMRGIAVDIYKES 212 (306)
T ss_pred CCCEEEEeCCchhHHHHHHHHHCCCCEEEEEec-HHHHHHHHHHHHhCCc---------------cceEEEEecCccCCC
Confidence 567999999999999999999999999999998 7899999999988776 368999999998653
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.+ .+|+|+.+ ...+. .+.+....+++++++.|+|||++++.
T Consensus 213 ~~---~~D~v~~~-------------~~lh~-----------------------~~~~~~~~il~~~~~~L~pgG~l~i~ 253 (306)
T TIGR02716 213 YP---EADAVLFC-------------RILYS-----------------------ANEQLSTIMCKKAFDAMRSGGRLLIL 253 (306)
T ss_pred CC---CCCEEEeE-------------hhhhc-----------------------CChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 32 46988621 00111 11122347899999999999999883
No 346
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.17 E-value=5.9e-10 Score=126.55 Aligned_cols=195 Identities=15% Similarity=0.197 Sum_probs=130.9
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCc--
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGF-- 731 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f-- 731 (903)
..+..+..++.||.+.. .++++|++.++..++.++++|||.|+++..++-+....+...|+++++++.. .+.+
T Consensus 68 I~eAe~~aA~~fGAd~t----~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~~~~gi 142 (417)
T PF01276_consen 68 IKEAEELAARAFGADKT----FFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-DNEYGI 142 (417)
T ss_dssp HHHHHHHHHHHHTESEE----EEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E-TTS-
T ss_pred HHHHHHHHHHhcCCCeE----EEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-ccccCC
Confidence 45667777888997755 9999999999999999999999999999999999999999999999999875 3332
Q ss_pred --ccCH-----HHHHHHhhcCC----CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCC-CccCCCCC
Q 043334 732 --KMTE-----KTLVTILETVK----KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSG-LEFNYEGW 799 (903)
Q Consensus 732 --~ld~-----~~L~~~l~~~~----~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~-l~f~~~~~ 799 (903)
.+++ +.++++++... .++++|++|+ --|.++. +++|+++|.++++.|++||+|+. +.|..-+.
T Consensus 143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT--Y~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT--YYGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS---TTSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGT
T ss_pred ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC--CCeEEEC---HHHHHHHhcccCCEEEEEccccccccCCCCcc
Confidence 2455 88988887542 2359999996 7899988 89999999999999999999964 34442111
Q ss_pred CCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee-EEEeCcHH--HHHHHHh---CCCCCCCcHHHHH
Q 043334 800 GGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVLNHPQ--LVDAFSS---FPGLSKPHSTVRY 867 (903)
Q Consensus 800 s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~~~~~--li~~l~~---~~~~~~~s~~~Q~ 867 (903)
+... +- .+.. .+..++++.|.-|++ +++.-+ ++...... -.+++.+ +.++.+||.+.-.
T Consensus 218 ~a~~---~g--ad~~--~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmA 282 (417)
T PF01276_consen 218 SALA---LG--ADRP--NDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMA 282 (417)
T ss_dssp TCSS---TT--SS-C--TSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHH
T ss_pred chhh---cc--Cccc--cccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHH
Confidence 1111 01 1111 123789999999997 576665 55554431 1233332 3345566655433
No 347
>PRK06922 hypothetical protein; Provisional
Probab=99.17 E-value=2.7e-10 Score=133.88 Aligned_cols=120 Identities=19% Similarity=0.246 Sum_probs=89.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..+..+++.+|+.+|+|+|+|+.|++.|+++....+ .++.++++|+.+++
T Consensus 418 ~g~rVLDIGCGTG~ls~~LA~~~P~~kVtGIDIS~~MLe~Ararl~~~g-----------------~~ie~I~gDa~dLp 480 (677)
T PRK06922 418 KGDTIVDVGAGGGVMLDMIEEETEDKRIYGIDISENVIDTLKKKKQNEG-----------------RSWNVIKGDAINLS 480 (677)
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhcC-----------------CCeEEEEcchHhCc
Confidence 5789999999999999999998889999999999999999998875443 26889999998764
Q ss_pred c-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 R-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ...++||+|++|+++....+ +++.. +...+......++++++++|||||.+++
T Consensus 481 ~~fedeSFDvVVsn~vLH~L~s--yIp~~-----------------------g~~f~~edl~kiLreI~RVLKPGGrLII 535 (677)
T PRK06922 481 SSFEKESVDTIVYSSILHELFS--YIEYE-----------------------GKKFNHEVIKKGLQSAYEVLKPGGRIII 535 (677)
T ss_pred cccCCCCEEEEEEchHHHhhhh--hcccc-----------------------cccccHHHHHHHHHHHHHHcCCCcEEEE
Confidence 1 12248999999876642110 00000 0011223455899999999999999999
Q ss_pred EeC
Q 043334 189 NMG 191 (903)
Q Consensus 189 ~~~ 191 (903)
..+
T Consensus 536 ~D~ 538 (677)
T PRK06922 536 RDG 538 (677)
T ss_pred EeC
Confidence 654
No 348
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=99.16 E-value=4.9e-10 Score=117.67 Aligned_cols=76 Identities=22% Similarity=0.193 Sum_probs=64.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|+++..+++..+ +.+|+|+|+++++++.|++|+...++ .+++++++|...
T Consensus 75 ~~g~~VLdIG~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~----------------~~v~~~~gd~~~ 138 (212)
T PRK13942 75 KEGMKVLEIGTGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGY----------------DNVEVIVGDGTL 138 (212)
T ss_pred CCcCEEEEECCcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCC----------------CCeEEEECCccc
Confidence 3678999999999999999998764 36999999999999999999988776 479999999877
Q ss_pred cccCCCCceeEEEE
Q 043334 108 YCRDHDIQLERIVG 121 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~ 121 (903)
..... ++||+|++
T Consensus 139 ~~~~~-~~fD~I~~ 151 (212)
T PRK13942 139 GYEEN-APYDRIYV 151 (212)
T ss_pred CCCcC-CCcCEEEE
Confidence 65433 48999984
No 349
>KOG2899 consensus Predicted methyltransferase [General function prediction only]
Probab=99.16 E-value=2.1e-10 Score=117.66 Aligned_cols=151 Identities=18% Similarity=0.323 Sum_probs=101.2
Q ss_pred hhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCC----------cchh-
Q 043334 21 LNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQP----------IYDA- 89 (903)
Q Consensus 21 L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~----------~~~~- 89 (903)
|+.+++.++.+..+|||||.+|.+++.+|+.++...|.|+|||+..|..|+++++...-.....+ +...
T Consensus 49 Lk~L~~~~f~~~~~LDIGCNsG~lt~~iak~F~~r~iLGvDID~~LI~~Ark~~r~~~~~~~~~~~~~~~~~~~~~~~is 128 (288)
T KOG2899|consen 49 LKVLEKDWFEPKQALDIGCNSGFLTLSIAKDFGPRRILGVDIDPVLIQRARKEIRFPCDHETEVSGKFPASFGVQFGPIS 128 (288)
T ss_pred hhhccccccCcceeEeccCCcchhHHHHHHhhccceeeEeeccHHHHHHHHHhccccccccccccCCCcccccccccccc
Confidence 44456667889999999999999999999999999999999999999999999864321100000 0000
Q ss_pred -------h-hcccCCcE-------EEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccc
Q 043334 90 -------E-KKTLLDRV-------EFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYC 154 (903)
Q Consensus 90 -------~-~~~~~~~v-------~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~ 154 (903)
+ ...+++++ .+-..|+++.. ...||+|+| .
T Consensus 129 ~~~~a~~a~t~~~p~n~~f~~~n~vle~~dfl~~~---~~~fDiIlc--------------------------------L 173 (288)
T KOG2899|consen 129 QRNEADRAFTTDFPDNVWFQKENYVLESDDFLDMI---QPEFDIILC--------------------------------L 173 (288)
T ss_pred ccccccccccccCCcchhcccccEEEecchhhhhc---cccccEEEE--------------------------------E
Confidence 0 00112222 22333344222 237888874 1
Q ss_pred cccccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHC
Q 043334 155 ALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERR 206 (903)
Q Consensus 155 al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~ 206 (903)
++..|+.-.+|.+-+.++|..++++|.|||+++++--........++..+..
T Consensus 174 SiTkWIHLNwgD~GL~~ff~kis~ll~pgGiLvvEPQpWksY~kaar~~e~~ 225 (288)
T KOG2899|consen 174 SITKWIHLNWGDDGLRRFFRKISSLLHPGGILVVEPQPWKSYKKAARRSEKL 225 (288)
T ss_pred EeeeeEecccccHHHHHHHHHHHHhhCcCcEEEEcCCchHHHHHHHHHHHHh
Confidence 4455666677777788999999999999999999876555444444444443
No 350
>PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional
Probab=99.15 E-value=3.9e-10 Score=126.64 Aligned_cols=129 Identities=17% Similarity=0.180 Sum_probs=96.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
.+..+||||||+|.+++.+|+..|...++|+|+++.+++.|.+++..+++ .++.++++|+....
T Consensus 122 ~~p~vLEIGcGsG~~ll~lA~~~P~~~~iGIEI~~~~i~~a~~ka~~~gL----------------~NV~~i~~DA~~ll 185 (390)
T PRK14121 122 QEKILIEIGFGSGRHLLYQAKNNPNKLFIGIEIHTPSIEQVLKQIELLNL----------------KNLLIINYDARLLL 185 (390)
T ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHHHHcCC----------------CcEEEEECCHHHhh
Confidence 45689999999999999999999999999999999999999999988887 58999999986542
Q ss_pred c-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 R-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. -.++++|.|+.|.|.- .+.... ++. ....+++++.++|+|||.+.+
T Consensus 186 ~~~~~~s~D~I~lnFPdP-W~KkrH-----RRl--------------------------v~~~fL~e~~RvLkpGG~l~l 233 (390)
T PRK14121 186 ELLPSNSVEKIFVHFPVP-WDKKPH-----RRV--------------------------ISEDFLNEALRVLKPGGTLEL 233 (390)
T ss_pred hhCCCCceeEEEEeCCCC-ccccch-----hhc--------------------------cHHHHHHHHHHHcCCCcEEEE
Confidence 1 1234899999886522 111110 000 023789999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHC
Q 043334 189 NMGGRPGQGVCKRLFERR 206 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~ 206 (903)
.+....-.....+.+.+.
T Consensus 234 ~TD~~~y~~~~~e~~~~~ 251 (390)
T PRK14121 234 RTDSELYFEFSLELFLKL 251 (390)
T ss_pred EEECHHHHHHHHHHHHhC
Confidence 776554444434455444
No 351
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=99.15 E-value=6.6e-10 Score=116.36 Aligned_cols=133 Identities=18% Similarity=0.228 Sum_probs=89.0
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++ | +.. .+++++++|+.+
T Consensus 50 ~~~~~VLDlG~GtG~~t~~l~~~~~~~~~V~aVDi~~-~----------~~~----------------~~v~~i~~D~~~ 102 (209)
T PRK11188 50 KPGMTVVDLGAAPGGWSQYAVTQIGDKGRVIACDILP-M----------DPI----------------VGVDFLQGDFRD 102 (209)
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCCceEEEEeccc-c----------cCC----------------CCcEEEecCCCC
Confidence 4678999999999999999999864 35999999998 1 112 368999999987
Q ss_pred cc-------cCCCCceeEEEECC-CCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhc
Q 043334 108 YC-------RDHDIQLERIVGCI-PQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGV 179 (903)
Q Consensus 108 ~~-------~~~~~~fD~Iv~Np-Py~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~ 179 (903)
.. ....++||+|++|+ |+........... ...+...+++++.++
T Consensus 103 ~~~~~~i~~~~~~~~~D~V~S~~~~~~~g~~~~d~~~----------------------------~~~~~~~~L~~~~~~ 154 (209)
T PRK11188 103 ELVLKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPR----------------------------AMYLVELALDMCRDV 154 (209)
T ss_pred hHHHHHHHHHhCCCCCCEEecCCCCccCCChHHHHHH----------------------------HHHHHHHHHHHHHHH
Confidence 52 11234899999986 5543211100000 011234789999999
Q ss_pred ccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 180 IKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 180 LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
|||||.+++.+........+...++ ..|..+++..+.
T Consensus 155 LkpGG~~vi~~~~~~~~~~~l~~l~-~~f~~v~~~Kp~ 191 (209)
T PRK11188 155 LAPGGSFVVKVFQGEGFDEYLREIR-SLFTKVKVRKPD 191 (209)
T ss_pred cCCCCEEEEEEecCcCHHHHHHHHH-hCceEEEEECCc
Confidence 9999999996654444333222322 368888775543
No 352
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.15 E-value=3.6e-09 Score=117.72 Aligned_cols=190 Identities=17% Similarity=0.126 Sum_probs=145.5
Q ss_pred CCcHHHHHHHHHHHHcc--CC----CCCc--hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH--hcc---
Q 043334 628 PIPSLVKAAIFESFARQ--NM----SESE--IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC--CIL--- 694 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y--~~----~~G~--~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~--l~~--- 694 (903)
|+.+.+++++...+..+ ++ ..|. ..+.+..++.+++..|.+.. +|++|+|++++.++++.. ...
T Consensus 12 p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~---eIiFTSG~TEsnNlaI~g~~~a~~~~ 88 (386)
T COG1104 12 PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE---EIIFTSGATESNNLAIKGAALAYRNA 88 (386)
T ss_pred CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC---eEEEecCCcHHHHHHHHhhHHhhhcc
Confidence 56788899988887663 22 1232 23456677888888888764 899999999999998887 322
Q ss_pred -CCCeEEEcCCCcHHHHHHHHHc---CCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 695 -EGGTLCFPAGSNGNYVSAARFL---KANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 695 -pGD~Vlv~~P~y~~~~~~~~~~---G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
.|.+|+++.-.++...+.++.+ |.+|.++|++. +..+|+++|++++++++. +|-+..-| |-||++.+ ++
T Consensus 89 ~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~-LVSim~aN-nE~G~IQp---I~ 161 (386)
T COG1104 89 QKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTI-LVSIMHAN-NETGTIQP---IA 161 (386)
T ss_pred cCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCce-EEEEEecc-cCeeeccc---HH
Confidence 4679999999999999888777 99999999986 345999999999999884 89999998 99999998 89
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
+|.++|+++++++.+|-+-+ ++.-+. + +... .-.+.-.|--|.+|.-| +|.+...+.
T Consensus 162 ei~~i~k~~~i~fHvDAvQa---~Gkipi---~-------~~~~----~vD~ls~SaHK~~GpkG--iGaLyv~~~ 218 (386)
T COG1104 162 EIGEICKERGILFHVDAVQA---VGKIPI---D-------LEEL----GVDLLSFSAHKFGGPKG--IGALYVRPG 218 (386)
T ss_pred HHHHHHHHcCCeEEEehhhh---cCceec---c-------cccc----CcceEEeehhhccCCCc--eEEEEECCC
Confidence 99999999999999998763 222221 1 1111 13456667779999888 788887553
No 353
>TIGR00479 rumA 23S rRNA (uracil-5-)-methyltransferase RumA. This protein family was first proposed to be RNA methyltransferases by homology to the TrmA family. The member from E. coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA.
Probab=99.15 E-value=4e-10 Score=130.93 Aligned_cols=151 Identities=15% Similarity=0.192 Sum_probs=105.2
Q ss_pred ccCCcccCc--chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccc
Q 043334 3 VIPSIFIPE--DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALD 80 (903)
Q Consensus 3 ~~p~vfiP~--~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~ 80 (903)
+.|+.|... .....+++.+..... ..++.+|||+|||+|.+++.+++. ..+|+|+|+|+.|++.|++|+..+++
T Consensus 264 ~~~~~F~Q~N~~~~~~l~~~~~~~l~-~~~~~~vLDl~cG~G~~sl~la~~--~~~V~~vE~~~~av~~a~~n~~~~~~- 339 (431)
T TIGR00479 264 LSARDFFQVNSGQNEKLVDRALEALE-LQGEELVVDAYCGVGTFTLPLAKQ--AKSVVGIEVVPESVEKAQQNAELNGI- 339 (431)
T ss_pred ECCCceeecCHHHHHHHHHHHHHHhc-cCCCCEEEEcCCCcCHHHHHHHHh--CCEEEEEEcCHHHHHHHHHHHHHhCC-
Confidence 556667653 233333443332211 234579999999999999999987 56999999999999999999999887
Q ss_pred cCCCCcchhhhcccCCcEEEEEccccccccC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccc
Q 043334 81 EKGQPIYDAEKKTLLDRVEFHESDLLAYCRD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQ 157 (903)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~ 157 (903)
++++++.+|+.+.... ...+||+|+.|||..-.. .
T Consensus 340 ---------------~nv~~~~~d~~~~l~~~~~~~~~~D~vi~dPPr~G~~------~--------------------- 377 (431)
T TIGR00479 340 ---------------ANVEFLAGTLETVLPKQPWAGQIPDVLLLDPPRKGCA------A--------------------- 377 (431)
T ss_pred ---------------CceEEEeCCHHHHHHHHHhcCCCCCEEEECcCCCCCC------H---------------------
Confidence 4899999999765321 123699999999975211 0
Q ss_pred ccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 158 GFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 158 ~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.+++.+. .++|++.+++.+........ .+.+.+.||++..+.
T Consensus 378 -------------~~l~~l~-~l~~~~ivyvsc~p~tlard-~~~l~~~gy~~~~~~ 419 (431)
T TIGR00479 378 -------------EVLRTII-ELKPERIVYVSCNPATLARD-LEFLCKEGYGITWVQ 419 (431)
T ss_pred -------------HHHHHHH-hcCCCEEEEEcCCHHHHHHH-HHHHHHCCeeEEEEE
Confidence 3344333 37899988887764433333 346778899887763
No 354
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=99.15 E-value=9e-10 Score=127.93 Aligned_cols=149 Identities=14% Similarity=0.122 Sum_probs=104.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..+++..+ ..+|+|+|+++.+++.+++|+..+|+ .+++++++|..+.
T Consensus 252 ~g~~VLDl~ag~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~----------------~~v~~~~~D~~~~ 315 (434)
T PRK14901 252 PGEVILDACAAPGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGL----------------KSIKILAADSRNL 315 (434)
T ss_pred CcCEEEEeCCCCchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCC----------------CeEEEEeCChhhc
Confidence 578999999999999999998764 35999999999999999999999887 4799999999876
Q ss_pred cc---CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 109 CR---DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 109 ~~---~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
.. ...++||.|+.|||..........+.......++.. ..-..+...+++.+.++|||||+
T Consensus 316 ~~~~~~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~----------------~~l~~~Q~~iL~~a~~~lkpgG~ 379 (434)
T PRK14901 316 LELKPQWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKI----------------QELAPLQAELLESLAPLLKPGGT 379 (434)
T ss_pred ccccccccccCCEEEEeCCCCcccccccCcchhhhCCHHHH----------------HHHHHHHHHHHHHHHHhcCCCCE
Confidence 42 112379999999997643222111110000000000 00112345899999999999999
Q ss_pred EEEEeCCC---CcHHHHHHHHHHC-CCeE
Q 043334 186 MIFNMGGR---PGQGVCKRLFERR-GFRV 210 (903)
Q Consensus 186 ll~~~~~~---~~~~~l~~ll~~~-gf~~ 210 (903)
++..+.+. .....+...++++ +|+.
T Consensus 380 lvystcsi~~~Ene~~v~~~l~~~~~~~~ 408 (434)
T PRK14901 380 LVYATCTLHPAENEAQIEQFLARHPDWKL 408 (434)
T ss_pred EEEEeCCCChhhHHHHHHHHHHhCCCcEe
Confidence 98765443 4455667777776 4664
No 355
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]
Probab=99.14 E-value=1.3e-10 Score=121.00 Aligned_cols=106 Identities=16% Similarity=0.329 Sum_probs=80.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
+.|++|||+|||+|.++..||+. +++|+|+|++++||+.|++....+... ......++++.+.|....
T Consensus 88 ~~g~~ilDvGCGgGLLSepLArl--ga~V~GID~s~~~V~vA~~h~~~dP~~----------~~~~~y~l~~~~~~~E~~ 155 (282)
T KOG1270|consen 88 LLGMKILDVGCGGGLLSEPLARL--GAQVTGIDASDDMVEVANEHKKMDPVL----------EGAIAYRLEYEDTDVEGL 155 (282)
T ss_pred cCCceEEEeccCccccchhhHhh--CCeeEeecccHHHHHHHHHhhhcCchh----------ccccceeeehhhcchhhc
Confidence 34688999999999999999998 799999999999999999986544331 112234678888887776
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.. +||+|+| + ++.+|- ...+.+++.+.+.|||||.+++
T Consensus 156 ~~----~fDaVvc------------s--evleHV------------------------~dp~~~l~~l~~~lkP~G~lfi 193 (282)
T KOG1270|consen 156 TG----KFDAVVC------------S--EVLEHV------------------------KDPQEFLNCLSALLKPNGRLFI 193 (282)
T ss_pred cc----ccceeee------------H--HHHHHH------------------------hCHHHHHHHHHHHhCCCCceEe
Confidence 43 6999985 2 222321 1134789999999999999998
No 356
>PF01170 UPF0020: Putative RNA methylase family UPF0020; InterPro: IPR000241 This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains [].; PDB: 3LDU_A 3LDG_A 3K0B_A 3V8V_B 3V97_A 3TLJ_A 3TM5_B 3TM4_A 3TMA_A.
Probab=99.14 E-value=4.5e-10 Score=114.68 Aligned_cols=137 Identities=23% Similarity=0.245 Sum_probs=96.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCE---------EEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEE
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSK---------VYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVE 99 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~---------V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~ 99 (903)
.++..|||..||+|.+.+..+....... ++|.|+++++++.|++|+...+++ ..+.
T Consensus 27 ~~~~~vlDP~CGsGtiliEaa~~~~~~~~~~~~~~~~~~g~Di~~~~v~~a~~N~~~ag~~---------------~~i~ 91 (179)
T PF01170_consen 27 RPGDVVLDPFCGSGTILIEAALMGANIPPLNDINELKIIGSDIDPKAVRGARENLKAAGVE---------------DYID 91 (179)
T ss_dssp -TTS-EEETT-TTSHHHHHHHHHHTTTSTTTH-CH--EEEEESSHHHHHHHHHHHHHTT-C---------------GGEE
T ss_pred CCCCEEeecCCCCCHHHHHHHHHhhCcccccccccccEEecCCCHHHHHHHHHHHHhcccC---------------CceE
Confidence 3578999999999999999888876666 999999999999999999888873 5699
Q ss_pred EEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhc
Q 043334 100 FHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGV 179 (903)
Q Consensus 100 ~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~ 179 (903)
+.+.|+.++.... +.+|.||+||||-..-.. . .....+|..+++++.++
T Consensus 92 ~~~~D~~~l~~~~-~~~d~IvtnPPyG~r~~~---~---------------------------~~~~~ly~~~~~~~~~~ 140 (179)
T PF01170_consen 92 FIQWDARELPLPD-GSVDAIVTNPPYGRRLGS---K---------------------------KDLEKLYRQFLRELKRV 140 (179)
T ss_dssp EEE--GGGGGGTT-SBSCEEEEE--STTSHCH---H---------------------------HHHHHHHHHHHHHHHCH
T ss_pred EEecchhhccccc-CCCCEEEECcchhhhccC---H---------------------------HHHHHHHHHHHHHHHHH
Confidence 9999999987333 389999999999842110 0 11235677999999999
Q ss_pred ccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 180 IKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 180 LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
|++ ..+++..... . +++.+...+++..+....
T Consensus 141 l~~-~~v~l~~~~~-~---~~~~~~~~~~~~~~~~~~ 172 (179)
T PF01170_consen 141 LKP-RAVFLTTSNR-E---LEKALGLKGWRKRKLYNG 172 (179)
T ss_dssp STT-CEEEEEESCC-C---HHHHHTSTTSEEEEEEET
T ss_pred CCC-CEEEEEECCH-H---HHHHhcchhhceEEEEEe
Confidence 999 4444443332 2 244667778887776543
No 357
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.14 E-value=1.6e-09 Score=120.95 Aligned_cols=203 Identities=13% Similarity=0.103 Sum_probs=155.6
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHcc--CC--C-CCchH--HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQ--NM--S-ESEID--VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y--~~--~-~G~~~--lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
.+.+.+.|+.+... |.++.|++++...+..+ ++ . +|... -.++.++.+++..|.+.. +|++|+|+|+++
T Consensus 40 ~~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~---dIiFts~ATEs~ 115 (428)
T KOG1549|consen 40 HGTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPS---DIVFTSGATESN 115 (428)
T ss_pred CCCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCC---cEEEeCCchHHH
Confidence 56678888877654 57888999988887653 22 2 33322 246667777887777655 699999999999
Q ss_pred HHHHHHhcc-CCC----eEEEcCCCcHHHHHHH---HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCC
Q 043334 686 NKLVLCCIL-EGG----TLCFPAGSNGNYVSAA---RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTI 757 (903)
Q Consensus 686 ~~ll~~l~~-pGD----~Vlv~~P~y~~~~~~~---~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~ 757 (903)
++++..... .+| .|++..-.|+.....+ +..|.+++.+|... +...|.+.+++.++++++ ++.+..-+
T Consensus 116 Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~--~~~~d~~~~~~~i~~~T~-lv~I~~Vn- 191 (428)
T KOG1549|consen 116 NLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVED--SGLVDISKLREAIRSKTR-LVSIMHVN- 191 (428)
T ss_pred HHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCc--cccccHHHHHHhcCCCce-EEEEEecc-
Confidence 999988743 566 8999888888766555 55699999999973 445899999999999884 99999998
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce
Q 043334 758 NPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK 837 (903)
Q Consensus 758 NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR 837 (903)
|-+|.+++ +++|..+|+++++.+++|-+.+- +.-+ .+ +..+ +-..+..|.-|.||.+|
T Consensus 192 n~~gv~~P---v~EI~~icr~~~v~v~~DaAQav---G~i~---vD----V~el-------n~D~~s~s~HK~ygp~~-- 249 (428)
T KOG1549|consen 192 NEIGVLQP---VKEIVKICREEGVQVHVDAAQAV---GKIP---VD----VQEL-------NADFLSISAHKIYGPPG-- 249 (428)
T ss_pred cCcccccc---HHHHHHHhCcCCcEEEeehhhhc---CCcc---cc----HHHc-------CchheeeecccccCCCc--
Confidence 99999999 88999999999999999998841 1111 11 1222 24567888999999999
Q ss_pred eeEEEeCc
Q 043334 838 FGFLVLNH 845 (903)
Q Consensus 838 iG~lv~~~ 845 (903)
+|++.+..
T Consensus 250 iGaLYvr~ 257 (428)
T KOG1549|consen 250 IGALYVRR 257 (428)
T ss_pred ceEEEEcc
Confidence 99999875
No 358
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.14 E-value=2.5e-09 Score=119.19 Aligned_cols=172 Identities=15% Similarity=0.133 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~ 726 (903)
.+.+..+.+.++...|.+ +.++.+.++.++..++..++..|+.|++.+..|......+ ...|++...++++
T Consensus 76 nPt~~~le~~iaal~ga~-----~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~ 150 (409)
T KOG0053|consen 76 NPTRDVLESGIAALEGAA-----HALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD 150 (409)
T ss_pred CCchHHHHHHHHHHhCCc-----eEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh
Confidence 455778888888877754 3666677777888889999999999999999999877765 4578888888764
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
|++.+++++.+++ ++|++-+|. ||++.+.. +++|.++|+++|++||+|+.++...+.. +
T Consensus 151 -------~~~~~~~~i~~~t-~~V~~ESPs-NPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~~-p-------- 209 (409)
T KOG0053|consen 151 -------DLKKILKAIKENT-KAVFLESPS-NPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQD-P-------- 209 (409)
T ss_pred -------hHHHHHHhhccCc-eEEEEECCC-CCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccccC-h--------
Confidence 4788899998877 599999999 99999976 8889999999999999999996543321 1
Q ss_pred hhhhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhCCC
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~~~ 857 (903)
+. . +-.|+++|.+|.+|..+-=+ |.++.+..++.+.+...+.
T Consensus 210 -L~----l----GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~ 252 (409)
T KOG0053|consen 210 -LP----L----GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQE 252 (409)
T ss_pred -hh----c----CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHH
Confidence 11 1 24799999999997554444 5666665668888887765
No 359
>PRK04311 selenocysteine synthase; Provisional
Probab=99.14 E-value=6.5e-09 Score=121.00 Aligned_cols=208 Identities=11% Similarity=0.083 Sum_probs=140.6
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccCCC-----CCc-hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQNMS-----ESE-IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~~~-----~G~-~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
++..+.|.+ +.++.+.+++.+.+..|... .|. .+-.+.+++.+++..|.+ ..++++++++++..++.
T Consensus 88 v~~tNlg~s--~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae-----~a~vv~sgtaAl~l~l~ 160 (464)
T PRK04311 88 VLHTNLGRA--LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAE-----DALVVNNNAAAVLLALN 160 (464)
T ss_pred EEeccCCCC--CCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCC-----eEEEECCHHHHHHHHHH
Confidence 334444442 36788999998888766421 111 122357778888877864 24455556688887775
Q ss_pred HhccCCCeEEEcCCCcHH------HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCc--c-
Q 043334 691 CCILEGGTLCFPAGSNGN------YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPT--G- 761 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~------~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPT--G- 761 (903)
+ +.+||+|++++..+.. ....++..|++++.++... ..+++++++++++++ ++|++.+++ ||+ |
T Consensus 161 ~-l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~T-klV~~vh~s-N~~i~G~ 233 (464)
T PRK04311 161 A-LAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENT-ALLLKVHTS-NYRIEGF 233 (464)
T ss_pred H-hCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccC-eEEEEEcCC-Ccccccc
Confidence 5 5799999999864432 2345678899999998642 146899999999887 599999998 993 4
Q ss_pred -cCCCHHHHHHHHHHHHhCCcEEEEecCCCCC----ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 762 -LLYSNKEIENILTVCAKYGARVVIDTAFSGL----EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 762 -~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l----~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
...+ +++|+++|+++|+++|+|...+.+ .|.-... +.+...-.. +..++++|.+|.+|.|
T Consensus 234 ~~~~d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~------p~~~~~l~~----GaDiv~fSg~K~LgGp-- 298 (464)
T PRK04311 234 TKEVS---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDE------PTVQELLAA----GVDLVTFSGDKLLGGP-- 298 (464)
T ss_pred CCcCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCC------CchhhHHhc----CCcEEEecCcccccCC--
Confidence 3444 899999999999999999964322 1210000 011111111 3579999999998745
Q ss_pred eeeEEEeCcHHHHHHHHh
Q 043334 837 KFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~ 854 (903)
..|++++.++ +++.+.+
T Consensus 299 ~~G~i~g~~~-li~~l~~ 315 (464)
T PRK04311 299 QAGIIVGKKE-LIARLKK 315 (464)
T ss_pred ceEEEEEcHH-HHHHHhh
Confidence 5899999877 8887774
No 360
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.13 E-value=5.8e-09 Score=117.69 Aligned_cols=167 Identities=13% Similarity=0.172 Sum_probs=127.5
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~ 726 (903)
.+-+.++++.++...|.. ..+.++.+++++..++.+++++||+|++++..|++....+ +..|.++..++..
T Consensus 62 nPT~~~lE~~~a~LEg~~-----~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~ 136 (396)
T COG0626 62 NPTRDALEEALAELEGGE-----DAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG 136 (396)
T ss_pred CccHHHHHHHHHHhhCCC-----cEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC
Confidence 556788888888865432 5777888899999999999999999999999988866554 5689999888652
Q ss_pred CCCCcccCHHHHHHHhh-cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchh
Q 043334 727 SEVGFKMTEKTLVTILE-TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLE 805 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~-~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~ 805 (903)
+.+.+.+++. +++ ++|++-+|+ |||-.+.+ +.+|.++|+++|+.+|+|+.|..-.+..+
T Consensus 137 -------~~~~~~~~~~~~~t-k~v~lEtPs-NP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~P-------- 196 (396)
T COG0626 137 -------DDEALEAAIKEPNT-KLVFLETPS-NPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQRP-------- 196 (396)
T ss_pred -------ChHHHHHHhcccCc-eEEEEeCCC-Cccccccc---HHHHHHHHHhcCCEEEEECCcccccccCh--------
Confidence 4556666666 467 599999999 99988876 99999999999999999999964333221
Q ss_pred hhhhhhccCCCCCCceEEEccCchhcccccceee-EEEeCcHHHHHHH
Q 043334 806 GCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVLNHPQLVDAF 852 (903)
Q Consensus 806 ~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~~~~~li~~l 852 (903)
+. . +-.|+++|.+|.++..+-=+| .++++++.+.+.+
T Consensus 197 --L~----~----GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~ 234 (396)
T COG0626 197 --LE----L----GADIVVHSATKYLGGHSDVLGGVVLTPNEELYELL 234 (396)
T ss_pred --hh----c----CCCEEEEeccccccCCcceeeeEEecChHHHHHHH
Confidence 11 1 357999999999986555554 4555676566655
No 361
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=99.13 E-value=1e-09 Score=127.27 Aligned_cols=149 Identities=16% Similarity=0.129 Sum_probs=104.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..+..+++..++.+|+|+|+++.+++.+++|++..|++ .++.+..+|.....
T Consensus 238 ~g~~VLDlcag~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~---------------~~v~~~~~d~~~~~ 302 (426)
T TIGR00563 238 NEETILDACAAPGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLT---------------IKAETKDGDGRGPS 302 (426)
T ss_pred CCCeEEEeCCCccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCC---------------eEEEEecccccccc
Confidence 578999999999999999999877679999999999999999999988862 24555778876543
Q ss_pred c-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 R-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ...++||.|+.+||+....-....+.......+++ -.....+...+++++.++|||||.+++
T Consensus 303 ~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~----------------~~~l~~lQ~~lL~~a~~~LkpgG~lvy 366 (426)
T TIGR00563 303 QWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRD----------------IAELAELQSEILDAIWPLLKTGGTLVY 366 (426)
T ss_pred ccccccccCEEEEcCCCCCCcccccCcchhhcCCHHH----------------HHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 2 12237999999999885443222111000000000 001122345899999999999999998
Q ss_pred EeCCC---CcHHHHHHHHHHCC-Ce
Q 043334 189 NMGGR---PGQGVCKRLFERRG-FR 209 (903)
Q Consensus 189 ~~~~~---~~~~~l~~ll~~~g-f~ 209 (903)
.+.+. .....+...++++. |.
T Consensus 367 stcs~~~~Ene~~v~~~l~~~~~~~ 391 (426)
T TIGR00563 367 ATCSVLPEENSEQIKAFLQEHPDFP 391 (426)
T ss_pred EeCCCChhhCHHHHHHHHHhCCCCe
Confidence 76554 46666677777763 53
No 362
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=99.13 E-value=1.6e-09 Score=115.22 Aligned_cols=106 Identities=25% Similarity=0.308 Sum_probs=82.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..+++.++ ..+++|+|+++.+++.+++++..+++ ..++.++.+|+.+.
T Consensus 51 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~---------------~~~~~~~~~d~~~~ 115 (239)
T PRK00216 51 PGDKVLDLACGTGDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGL---------------SGNVEFVQGDAEAL 115 (239)
T ss_pred CCCeEEEeCCCCCHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhccccc---------------ccCeEEEecccccC
Confidence 468999999999999999999876 58999999999999999999865543 24789999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+++--....+ ....+++.+.+.|+|||.+++
T Consensus 116 ~~~~-~~~D~I~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~~gG~li~ 156 (239)
T PRK00216 116 PFPD-NSFDAVTIAFGLRNVP--------------------------------------DIDKALREMYRVLKPGGRLVI 156 (239)
T ss_pred CCCC-CCccEEEEecccccCC--------------------------------------CHHHHHHHHHHhccCCcEEEE
Confidence 5432 4899998531111000 023678999999999999887
Q ss_pred E
Q 043334 189 N 189 (903)
Q Consensus 189 ~ 189 (903)
.
T Consensus 157 ~ 157 (239)
T PRK00216 157 L 157 (239)
T ss_pred E
Confidence 3
No 363
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=99.13 E-value=4.1e-10 Score=126.72 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=98.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
+|++|||+.|-||.+++.+|.. +..+|++||+|..+++.|++|+.+||++ .+++.|+++|++++.
T Consensus 217 ~GkrvLNlFsYTGgfSv~Aa~g-GA~~vt~VD~S~~al~~a~~N~~LNg~~--------------~~~~~~i~~Dvf~~l 281 (393)
T COG1092 217 AGKRVLNLFSYTGGFSVHAALG-GASEVTSVDLSKRALEWARENAELNGLD--------------GDRHRFIVGDVFKWL 281 (393)
T ss_pred cCCeEEEecccCcHHHHHHHhc-CCCceEEEeccHHHHHHHHHHHHhcCCC--------------ccceeeehhhHHHHH
Confidence 5899999999999999997764 3449999999999999999999999985 357999999999886
Q ss_pred cCC---CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 110 RDH---DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 110 ~~~---~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
... +.+||+||.+||-+....... . .....|..++..+.+.|+|||++
T Consensus 282 ~~~~~~g~~fDlIilDPPsF~r~k~~~-~----------------------------~~~rdy~~l~~~~~~iL~pgG~l 332 (393)
T COG1092 282 RKAERRGEKFDLIILDPPSFARSKKQE-F----------------------------SAQRDYKDLNDLALRLLAPGGTL 332 (393)
T ss_pred HHHHhcCCcccEEEECCcccccCcccc-h----------------------------hHHHHHHHHHHHHHHHcCCCCEE
Confidence 533 238999999999987654332 1 12233668999999999999999
Q ss_pred EEEeCCCC
Q 043334 187 IFNMGGRP 194 (903)
Q Consensus 187 l~~~~~~~ 194 (903)
++......
T Consensus 333 ~~~s~~~~ 340 (393)
T COG1092 333 VTSSCSRH 340 (393)
T ss_pred EEEecCCc
Confidence 99665443
No 364
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB. When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.
Probab=99.11 E-value=6e-10 Score=113.89 Aligned_cols=104 Identities=22% Similarity=0.304 Sum_probs=78.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.++||+|||.|..++.||++ |..|+++|+|+.+++.+++.+...++ .++..+.|+.+.
T Consensus 29 ~~~g~~LDlgcG~GRNalyLA~~--G~~VtAvD~s~~al~~l~~~a~~~~l-----------------~i~~~~~Dl~~~ 89 (192)
T PF03848_consen 29 LKPGKALDLGCGEGRNALYLASQ--GFDVTAVDISPVALEKLQRLAEEEGL-----------------DIRTRVADLNDF 89 (192)
T ss_dssp S-SSEEEEES-TTSHHHHHHHHT--T-EEEEEESSHHHHHHHHHHHHHTT------------------TEEEEE-BGCCB
T ss_pred cCCCcEEEcCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHhhcCc-----------------eeEEEEecchhc
Confidence 45789999999999999999998 89999999999999999888877776 499999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
..+. .||+|++.-.+.+ +... ....+++...+.++|||.+++
T Consensus 90 ~~~~--~yD~I~st~v~~f------L~~~------------------------------~~~~i~~~m~~~~~pGG~~li 131 (192)
T PF03848_consen 90 DFPE--EYDFIVSTVVFMF------LQRE------------------------------LRPQIIENMKAATKPGGYNLI 131 (192)
T ss_dssp S-TT--TEEEEEEESSGGG------S-GG------------------------------GHHHHHHHHHHTEEEEEEEEE
T ss_pred cccC--CcCEEEEEEEecc------CCHH------------------------------HHHHHHHHHHhhcCCcEEEEE
Confidence 6543 8999985321111 1111 123678899999999999888
Q ss_pred E
Q 043334 189 N 189 (903)
Q Consensus 189 ~ 189 (903)
.
T Consensus 132 ~ 132 (192)
T PF03848_consen 132 V 132 (192)
T ss_dssp E
T ss_pred E
Confidence 4
No 365
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.10 E-value=6.3e-09 Score=120.30 Aligned_cols=232 Identities=10% Similarity=0.018 Sum_probs=151.0
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc-cCC----------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR-QNM----------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~-y~~----------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
.+.|+|--++|. +++.+++++...+.. |.. .....++.....+..++.||.++. +|-.-+|+++
T Consensus 49 ~~~l~LiasEN~--~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~a---nvqp~Sg~~A 123 (493)
T PRK13580 49 RSSLKLIASENY--SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHA---YVQPHSGADA 123 (493)
T ss_pred hcCceEeccccc--CCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcc---cccCCCcHHH
Confidence 467888777775 466777776665543 211 111344455556667778888876 7888888887
Q ss_pred HHHHHHHHhccC-------------------------------CCeEEEcCCCcHHHHHH-----HHHcCCEEEEecCCC
Q 043334 684 LFNKLVLCCILE-------------------------------GGTLCFPAGSNGNYVSA-----ARFLKANIVNIPTES 727 (903)
Q Consensus 684 al~~ll~~l~~p-------------------------------GD~Vlv~~P~y~~~~~~-----~~~~G~~vv~v~~~~ 727 (903)
.+.. +.++++| ||+|+..++..+.+... +.....+.+.++++.
T Consensus 124 n~~v-~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~ 202 (493)
T PRK13580 124 NLVA-FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDP 202 (493)
T ss_pred HHHH-HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCc
Confidence 7764 6778776 89998887765544222 112225667777764
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
+ ...+|.+++++.+++++ +.|+++..+ |=+ ...+ +++|.++|+++|+++++|+++.--.+.+...
T Consensus 203 ~-~g~iD~d~l~~~~~~~~-plvii~g~S-~~~-~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~~-------- 267 (493)
T PRK13580 203 D-TGLLDYDEIAALAREFK-PLILVAGYS-AYP-RRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKVF-------- 267 (493)
T ss_pred c-cCccCHHHHHHHHhhcC-CEEEEeCcc-ccC-CCcC---HHHHHHHHHHcCCEEEEECchhhceeccccc--------
Confidence 3 35699999999999877 478888776 554 4666 8888888999999999999997545543321
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
....... .+..++++|++|++. |-+.|+++++++ +++.+.+... .+++..+...++..++
T Consensus 268 ~~~~~~~---~~~D~vtgT~hKaL~--GP~GG~I~~~~~-l~~~L~~a~P~i~gg~l~p~iAA~avAl 329 (493)
T PRK13580 268 TGDEDPV---PHADIVTTTTHKTLR--GPRGGLVLAKKE-YADAVDKGCPLVLGGPLPHVMAAKAVAL 329 (493)
T ss_pred hhhcCCC---CCCcEEEeCChhhcc--CCCeEEEEecHH-HHHHHhhCCCcccCCCccHHHHHHHHHH
Confidence 0000011 125689999999983 444599999877 8888854433 3344444333333333
No 366
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.10 E-value=4.2e-10 Score=123.36 Aligned_cols=201 Identities=15% Similarity=0.148 Sum_probs=136.9
Q ss_pred CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHH
Q 043334 629 IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGN 708 (903)
Q Consensus 629 ~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~ 708 (903)
+.+.+.+++.++. .....||..+....+++.+++.+|.+.. ++ +.+++.+-..++.+++.|++.|++..+++..
T Consensus 7 ~~~~m~~a~~~a~-~gd~~Yg~D~~~~~l~~~i~~l~g~e~a----~f-~~sGT~An~~al~~~~~~~~~vi~~~~aHi~ 80 (290)
T PF01212_consen 7 PTPAMLEAMAAAN-VGDDAYGEDPTTARLEERIAELFGKEAA----LF-VPSGTMANQLALRAHLRPGESVICADTAHIH 80 (290)
T ss_dssp S-HHEEHHHHHTT-SB-CCTTSSHHHHHHHHHHHHHHTSSEE----EE-ESSHHHHHHHHHHHHHHTTEEEEEETTEHHH
T ss_pred CCHHHHHHHHccc-cCCcccCCChhHHHHHHHHHHHcCCCEE----EE-eCCCChHHHHHHHHHHhcCCceeccccceee
Confidence 5667788885543 3334689999999999999999998643 54 4555666666788888999999999998764
Q ss_pred HH---HHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-----CCCcEEEEECCCCCCc-ccCCCHHHHHHHHHHHHhC
Q 043334 709 YV---SAARFLKANIVNIPTESEVGFKMTEKTLVTILET-----VKKPWVYISGPTINPT-GLLYSNKEIENILTVCAKY 779 (903)
Q Consensus 709 ~~---~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-----~~~~~vil~~P~~NPT-G~v~s~eel~eI~~ia~k~ 779 (903)
.. ......|+++++++... +.++|+++|++.+.. ..+++|+|++|+ |-. |.++|.+++++|.++|+++
T Consensus 81 ~~E~ga~~~~~G~~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~-~~~GG~~~s~~el~ai~~~a~~~ 157 (290)
T PF01212_consen 81 FDETGAIEELSGAKLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTT-ELAGGTVYSLEELRAISELAREH 157 (290)
T ss_dssp HSSTTHHHHHTTCEEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSB-TTTTSB---HHHHHHHHHHHHHH
T ss_pred eeccchhhHhcCcEEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecC-cCCCCeeCCHHHHHHHHHHHHhC
Confidence 32 33466999999999864 246999999999876 234689999998 764 8999999999999999999
Q ss_pred CcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH
Q 043334 780 GARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 780 ~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~ 853 (903)
|+.+..|-+- +. +... .+...+..+.. .-.++--|+||..++++ |-+++-++++++...
T Consensus 158 gl~lhmDGAR--l~-~a~~----~~~~~~~e~~~-----~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~ 216 (290)
T PF01212_consen 158 GLPLHMDGAR--LA-NAAA----ALGVSLAEIAA-----GADSVSFGGTKNGGAPG---GAVLAGNKEFIAKAR 216 (290)
T ss_dssp T-EEEEEETT--HH-HHHC----HHHHHHHHHHT-----TSSEEEEETTSTT-SSS---EEEEEESHHHHHHHH
T ss_pred ceEEEEehhh--HH-Hhhh----cccccHHHHhh-----hCCEEEEEEEccccccc---ceEEEechHHHHHHH
Confidence 9999999875 21 1110 00011222222 24677889999998776 655544444655443
No 367
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.10 E-value=1.5e-08 Score=118.16 Aligned_cols=268 Identities=11% Similarity=0.037 Sum_probs=164.4
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccC---CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQN---MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~---~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...||+..|. ..++ ..+.+.+++.+.+.+.. ...+..+.+..+++.+.+....... + .++++++++++
T Consensus 52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~-~-~v~f~~sGseA 129 (443)
T PRK06058 52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHE-K-RSALFNSGAEA 129 (443)
T ss_pred eCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC-C-EEEEeCCcHHH
Confidence 35677889987653 3344 57788889888876532 1123456677788888876542211 2 67777777888
Q ss_pred HHHHHHHhc--cCCCeEEEcCCCcHHHHHHHHHc-CC-------------EEEEecCCC--CC--CcccC--------HH
Q 043334 685 FNKLVLCCI--LEGGTLCFPAGSNGNYVSAARFL-KA-------------NIVNIPTES--EV--GFKMT--------EK 736 (903)
Q Consensus 685 l~~ll~~l~--~pGD~Vlv~~P~y~~~~~~~~~~-G~-------------~vv~v~~~~--~~--~f~ld--------~~ 736 (903)
...++.... ...++|+...++|-+....+... +. .+..+|... .+ ++..+ .+
T Consensus 130 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (443)
T PRK06058 130 VENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAIT 209 (443)
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHH
Confidence 877776321 22368888898887765443221 10 112222110 00 00011 22
Q ss_pred HHHHHhhcCCCcEEEEECCCCCCcccC--CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccC
Q 043334 737 TLVTILETVKKPWVYISGPTINPTGLL--YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSS 814 (903)
Q Consensus 737 ~L~~~l~~~~~~~vil~~P~~NPTG~v--~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~ 814 (903)
.+++.+.... .+.++..|- +..|-+ .+.+.+++|.++|++||+++|.||++.++...|..+ . ....+-.
T Consensus 210 ~l~~~~~~~~-iAavi~EPi-~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f---a----~~~~gv~ 280 (443)
T PRK06058 210 VIEKQVGADN-LAAVIIEPI-QGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF---A----CEHEGIV 280 (443)
T ss_pred HHHHhhCCCc-eEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh---H----HHhcCCC
Confidence 2333333233 366778887 666543 458899999999999999999999998765444321 1 1112222
Q ss_pred CCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHH
Q 043334 815 TNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIR 892 (903)
Q Consensus 815 ~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~ 892 (903)
| | ++ +++|.++ .|+++|+++++++ +++.+.... .+.+.+++++.++.+.|+.-.. +.+.+.+.++.+
T Consensus 281 P---D-iv---~~gK~l~-~G~Pi~av~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~--~~l~~~~~~~g~ 349 (443)
T PRK06058 281 P---D-LI---TTAKGIA-GGLPLSAVTGRAE-IMDAPHPGGLGGTYGGNPVACAAALAAIETIEE--DDLVARARQIEA 349 (443)
T ss_pred C---C-EE---EEccccc-CCCccEEEEEcHH-HHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH--cCHHHHHHHHHH
Confidence 2 1 22 4489998 8999999999887 888876443 3778899999999999953111 234555665555
Q ss_pred HHHHHHHH
Q 043334 893 NLESRSKR 900 (903)
Q Consensus 893 ~y~~Rr~~ 900 (903)
.++++.+.
T Consensus 350 ~l~~~L~~ 357 (443)
T PRK06058 350 LMTDRLRA 357 (443)
T ss_pred HHHHHHHH
Confidence 55555544
No 368
>PRK08317 hypothetical protein; Provisional
Probab=99.10 E-value=1.4e-09 Score=115.24 Aligned_cols=106 Identities=19% Similarity=0.156 Sum_probs=81.0
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++.+ +..+++|+|+++.+++.++++.... ..++.+..+|+.+
T Consensus 18 ~~~~~vLdiG~G~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~-----------------~~~~~~~~~d~~~ 80 (241)
T PRK08317 18 QPGDRVLDVGCGPGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGL-----------------GPNVEFVRGDADG 80 (241)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCC-----------------CCceEEEeccccc
Confidence 357899999999999999999987 5679999999999999999883221 2478999999877
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
..... ++||+|+++-.+....+ ...+++++.+.|||||.++
T Consensus 81 ~~~~~-~~~D~v~~~~~~~~~~~--------------------------------------~~~~l~~~~~~L~~gG~l~ 121 (241)
T PRK08317 81 LPFPD-GSFDAVRSDRVLQHLED--------------------------------------PARALAEIARVLRPGGRVV 121 (241)
T ss_pred CCCCC-CCceEEEEechhhccCC--------------------------------------HHHHHHHHHHHhcCCcEEE
Confidence 64433 48999986422111100 2267899999999999998
Q ss_pred EEe
Q 043334 188 FNM 190 (903)
Q Consensus 188 ~~~ 190 (903)
+..
T Consensus 122 ~~~ 124 (241)
T PRK08317 122 VLD 124 (241)
T ss_pred EEe
Confidence 754
No 369
>PRK04457 spermidine synthase; Provisional
Probab=99.10 E-value=4.3e-10 Score=121.77 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=87.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||||||+|.++..+++..|+.+|+++|+|+++++.|++++...+. .++++++.+|..++.
T Consensus 66 ~~~~vL~IG~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~---------------~~rv~v~~~Da~~~l 130 (262)
T PRK04457 66 RPQHILQIGLGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPEN---------------GERFEVIEADGAEYI 130 (262)
T ss_pred CCCEEEEECCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCC---------------CCceEEEECCHHHHH
Confidence 46799999999999999999999999999999999999999998754332 258999999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|+.|. |.. . .++... ....+++++.+.|+|||+++++
T Consensus 131 ~~~~~~yD~I~~D~-~~~--~--~~~~~l-----------------------------~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 131 AVHRHSTDVILVDG-FDG--E--GIIDAL-----------------------------CTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred HhCCCCCCEEEEeC-CCC--C--CCcccc-----------------------------CcHHHHHHHHHhcCCCcEEEEE
Confidence 54444899999762 110 0 011000 0137899999999999999997
Q ss_pred eCCC
Q 043334 190 MGGR 193 (903)
Q Consensus 190 ~~~~ 193 (903)
....
T Consensus 177 ~~~~ 180 (262)
T PRK04457 177 LWSR 180 (262)
T ss_pred cCCC
Confidence 6543
No 370
>TIGR02072 BioC biotin biosynthesis protein BioC. This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology.
Probab=99.09 E-value=1.2e-09 Score=115.91 Aligned_cols=110 Identities=22% Similarity=0.342 Sum_probs=85.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++..+..+++|+|+++.+++.++++.. +++.++.+|+.+.+
T Consensus 34 ~~~~vLDlG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~--------------------~~~~~~~~d~~~~~ 93 (240)
T TIGR02072 34 IPASVLDIGCGTGYLTRALLKRFPQAEFIALDISAGMLAQAKTKLS--------------------ENVQFICGDAEKLP 93 (240)
T ss_pred CCCeEEEECCCccHHHHHHHHhCCCCcEEEEeChHHHHHHHHHhcC--------------------CCCeEEecchhhCC
Confidence 4578999999999999999999888899999999999999987652 36889999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++-.....+ ....+++++.+.|+|||.+++.
T Consensus 94 ~~~-~~fD~vi~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~~~G~l~~~ 134 (240)
T TIGR02072 94 LED-SSFDLIVSNLALQWCD--------------------------------------DLSQALSELARVLKPGGLLAFS 134 (240)
T ss_pred CCC-CceeEEEEhhhhhhcc--------------------------------------CHHHHHHHHHHHcCCCcEEEEE
Confidence 433 3899999752221110 0236899999999999999997
Q ss_pred eCCCCcHHH
Q 043334 190 MGGRPGQGV 198 (903)
Q Consensus 190 ~~~~~~~~~ 198 (903)
.........
T Consensus 135 ~~~~~~~~~ 143 (240)
T TIGR02072 135 TFGPGTLHE 143 (240)
T ss_pred eCCccCHHH
Confidence 655444333
No 371
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated
Probab=99.09 E-value=1.1e-09 Score=124.20 Aligned_cols=139 Identities=17% Similarity=0.200 Sum_probs=100.1
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccC
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD 111 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~ 111 (903)
.+|||++||+|.+++.+++. ..+|+|+|+++.|++.|++|+..|++ ++++++.+|+.+....
T Consensus 208 ~~vLDl~~G~G~~sl~la~~--~~~v~~vE~~~~ai~~a~~N~~~~~~----------------~~v~~~~~d~~~~l~~ 269 (362)
T PRK05031 208 GDLLELYCGNGNFTLALARN--FRRVLATEISKPSVAAAQYNIAANGI----------------DNVQIIRMSAEEFTQA 269 (362)
T ss_pred CeEEEEeccccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHHhCC----------------CcEEEEECCHHHHHHH
Confidence 57999999999999999987 46999999999999999999999987 4899999999775321
Q ss_pred C---------------CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHH
Q 043334 112 H---------------DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEG 176 (903)
Q Consensus 112 ~---------------~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~ 176 (903)
. ..+||+|+.+||+.- +.. .+++.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~D~v~lDPPR~G------~~~----------------------------------~~l~~l 309 (362)
T PRK05031 270 MNGVREFNRLKGIDLKSYNFSTIFVDPPRAG------LDD----------------------------------ETLKLV 309 (362)
T ss_pred HhhcccccccccccccCCCCCEEEECCCCCC------CcH----------------------------------HHHHHH
Confidence 0 125899999999731 111 233333
Q ss_pred hhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeec
Q 043334 177 IGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEK 240 (903)
Q Consensus 177 ~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~ 240 (903)
.+ |++++++.++.......+. .|.+ ||++.++... ..|..+..++.++.+++
T Consensus 310 ~~---~~~ivyvSC~p~tlarDl~-~L~~-gY~l~~v~~~-------DmFPqT~HvE~v~lL~r 361 (362)
T PRK05031 310 QA---YERILYISCNPETLCENLE-TLSQ-THKVERFALF-------DQFPYTHHMECGVLLEK 361 (362)
T ss_pred Hc---cCCEEEEEeCHHHHHHHHH-HHcC-CcEEEEEEEc-------ccCCCCCcEEEEEEEEe
Confidence 33 6889999888755444444 3433 8998887422 23344556666666654
No 372
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.08 E-value=8.9e-09 Score=119.55 Aligned_cols=212 Identities=11% Similarity=0.089 Sum_probs=140.0
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccCCC-----CC-chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQNMS-----ES-EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~~~-----~G-~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
++..+.|.. +.++.+.+++.+.+..|... .| ..+..+.+++.+++..|.+. .+++++ ++.++..++.
T Consensus 83 v~~tNlg~s--~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~----alvv~s-g~aAi~l~l~ 155 (454)
T TIGR00474 83 VLHTNLGRA--PLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED----ALVVNN-NAAAVLLALN 155 (454)
T ss_pred EEeccCCCC--CCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCc----EEEECC-HHHHHHHHHH
Confidence 344444442 36788999999888776421 11 11224677788888878753 355555 4556776664
Q ss_pred HhccCCCeEEEcCCCcHHH------HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCc--c-
Q 043334 691 CCILEGGTLCFPAGSNGNY------VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPT--G- 761 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~------~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPT--G- 761 (903)
+ +.+||+|++++..|..| ...++..|++++.++.+. ..+++++++++++++ +++++.+++ ||+ |
T Consensus 156 ~-l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T-~lv~~~h~s-N~~~~G~ 228 (454)
T TIGR00474 156 T-LAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENT-ALLLKVHTS-NYRIVGF 228 (454)
T ss_pred H-hCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCC-EEEEEEccC-cccccCC
Confidence 4 68999999998765332 345677899999998742 147899999999888 489999998 995 6
Q ss_pred -cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 762 -LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 762 -~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
.+.+ +++|+++|+++|+++|+|...+.+. +...+. ....+.+...... +..++++|.+|.+|.| ..|+
T Consensus 229 ~~~~d---l~~I~~la~~~g~~vivD~~sG~l~-~~~~~g-l~~~p~~~~~~~~----GaDiv~fSg~K~LgGp--~~G~ 297 (454)
T TIGR00474 229 TEEVS---IAELVALGREHGLPVMEDLGSGSLV-DLSRYG-LPDEPTVQEVIAA----GVDLVTFSGDKLLGGP--QAGI 297 (454)
T ss_pred CCCCC---HHHHHHHHHHcCCeEEEECCCcccc-cchhcc-CCCCcccccHhHc----CCCEEEecCccccCCC--eEEE
Confidence 3555 8999999999999999998643221 100000 0000111111111 3568999999998755 4899
Q ss_pred EEeCcHHHHHHHHh
Q 043334 841 LVLNHPQLVDAFSS 854 (903)
Q Consensus 841 lv~~~~~li~~l~~ 854 (903)
+++.++ +++.+.+
T Consensus 298 i~g~~~-~i~~l~~ 310 (454)
T TIGR00474 298 IVGKKE-LIERLKK 310 (454)
T ss_pred EEECHH-HHHhhhh
Confidence 999876 7776554
No 373
>TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase. This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM.
Probab=99.08 E-value=2.1e-09 Score=113.43 Aligned_cols=72 Identities=29% Similarity=0.528 Sum_probs=61.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+|++|++.|++++..++. ..++++.++|+.+.
T Consensus 54 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~gvD~s~~~i~~a~~~~~~~~~---------------~~~i~~~~~d~~~~ 116 (219)
T TIGR02021 54 LKGKRVLDAGCGTGLLSIELAKR--GAIVKAVDISEQMVQMARNRAQGRDV---------------AGNVEFEVNDLLSL 116 (219)
T ss_pred CCCCEEEEEeCCCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC---------------CCceEEEECChhhC
Confidence 46789999999999999999876 67999999999999999999876654 24799999999876
Q ss_pred ccCCCCceeEEEE
Q 043334 109 CRDHDIQLERIVG 121 (903)
Q Consensus 109 ~~~~~~~fD~Iv~ 121 (903)
. ++||+|++
T Consensus 117 ~----~~fD~ii~ 125 (219)
T TIGR02021 117 C----GEFDIVVC 125 (219)
T ss_pred C----CCcCEEEE
Confidence 4 38999985
No 374
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=99.08 E-value=9.7e-10 Score=117.08 Aligned_cols=104 Identities=16% Similarity=0.215 Sum_probs=83.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++++|||+|||+|+.++.++...+ +.+|+++|+++++++.|++|++.+|+ .++++++.+|+.+.
T Consensus 68 ~~~~vLEiGt~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl---------------~~~i~~~~gda~~~ 132 (234)
T PLN02781 68 NAKNTLEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGV---------------DHKINFIQSDALSA 132 (234)
T ss_pred CCCEEEEecCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCcEEEEEccHHHH
Confidence 468999999999999999988765 56999999999999999999999987 36899999999876
Q ss_pred ccC-----CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 109 CRD-----HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 109 ~~~-----~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
... ..++||+|+.+. +. ..|..+++.+.+.|+||
T Consensus 133 L~~l~~~~~~~~fD~VfiDa-----~k------------------------------------~~y~~~~~~~~~ll~~G 171 (234)
T PLN02781 133 LDQLLNNDPKPEFDFAFVDA-----DK------------------------------------PNYVHFHEQLLKLVKVG 171 (234)
T ss_pred HHHHHhCCCCCCCCEEEECC-----CH------------------------------------HHHHHHHHHHHHhcCCC
Confidence 431 124899998421 00 11336788999999999
Q ss_pred cEEEEE
Q 043334 184 GIMIFN 189 (903)
Q Consensus 184 G~ll~~ 189 (903)
|.++++
T Consensus 172 G~ii~d 177 (234)
T PLN02781 172 GIIAFD 177 (234)
T ss_pred eEEEEE
Confidence 999984
No 375
>smart00650 rADc Ribosomal RNA adenine dimethylases.
Probab=99.07 E-value=7.2e-10 Score=112.18 Aligned_cols=77 Identities=25% Similarity=0.380 Sum_probs=66.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++|+.. . ++++++++|+.++.
T Consensus 13 ~~~~vLEiG~G~G~lt~~l~~~--~~~v~~vE~~~~~~~~~~~~~~~--~----------------~~v~ii~~D~~~~~ 72 (169)
T smart00650 13 PGDTVLEIGPGKGALTEELLER--AARVTAIEIDPRLAPRLREKFAA--A----------------DNLTVIHGDALKFD 72 (169)
T ss_pred CcCEEEEECCCccHHHHHHHhc--CCeEEEEECCHHHHHHHHHHhcc--C----------------CCEEEEECchhcCC
Confidence 5679999999999999999987 67999999999999999988732 1 47999999999886
Q ss_pred cCCCCceeEEEECCCCCC
Q 043334 110 RDHDIQLERIVGCIPQIL 127 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~ 127 (903)
... ..||.|++||||..
T Consensus 73 ~~~-~~~d~vi~n~Py~~ 89 (169)
T smart00650 73 LPK-LQPYKVVGNLPYNI 89 (169)
T ss_pred ccc-cCCCEEEECCCccc
Confidence 543 26999999999973
No 376
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=99.07 E-value=6.9e-10 Score=116.36 Aligned_cols=142 Identities=13% Similarity=0.160 Sum_probs=89.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||.|..++.||++ |.+|+|+|+|+.+++.+... ++++.......+. +..-..+++++++|+.++.
T Consensus 34 ~~~rvLd~GCG~G~da~~LA~~--G~~V~gvD~S~~Ai~~~~~~---~~~~~~~~~~~~~-~~~~~~~v~~~~~D~~~~~ 107 (213)
T TIGR03840 34 AGARVFVPLCGKSLDLAWLAEQ--GHRVLGVELSEIAVEQFFAE---NGLTPTVTQQGEF-TRYRAGNIEIFCGDFFALT 107 (213)
T ss_pred CCCeEEEeCCCchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHH---cCCCcceeccccc-eeeecCceEEEEccCCCCC
Confidence 5679999999999999999987 89999999999999986432 2221000000000 0001247999999999886
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||.|+-+--++ .++. +...++++.+.+.|||||++++.
T Consensus 108 ~~~~~~fD~i~D~~~~~------~l~~------------------------------~~R~~~~~~l~~lLkpgG~~ll~ 151 (213)
T TIGR03840 108 AADLGPVDAVYDRAALI------ALPE------------------------------EMRQRYAAHLLALLPPGARQLLI 151 (213)
T ss_pred cccCCCcCEEEechhhc------cCCH------------------------------HHHHHHHHHHHHHcCCCCeEEEE
Confidence 43234799987321111 1211 22337899999999999986663
Q ss_pred eCC-----------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MGG-----------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~~-----------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... ......+++.+. .+|.+..+.
T Consensus 152 ~~~~~~~~~~gpp~~~~~~eL~~~f~-~~~~i~~~~ 186 (213)
T TIGR03840 152 TLDYDQSEMAGPPFSVSPAEVEALYG-GHYEIELLE 186 (213)
T ss_pred EEEcCCCCCCCcCCCCCHHHHHHHhc-CCceEEEEe
Confidence 211 124455555554 246666553
No 377
>PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2.1.1.72 from EC) from Type I and Type IC restriction systems. These enzymes are responsible for the methylation of specific DNA sequences in order to prevent the host from digesting its own genome via its restriction enzymes. These methylases have the same sequence specificity as their corresponding restriction enzymes. The type I restriction and modification system is composed of three polypeptides R, M and S. The M and S subunits together form a methyltransferase that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit, the complex can also act as an endonuclease, binding to the same target sequence but cutting the DNA some distance from this site. Whether the DNA is cut or modified depends on the methylation state of the target sequence. When the target site is unmodified, the DNA is cut. When the target site is hemimethylated, the complex acts as a maintenance methyltransferase, modifying the DNA so that both strands become methylated.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2F8L_A 2Y7C_C 2Y7H_C 2AR0_B 3KHK_A 3LKD_A 2OKC_B.
Probab=99.07 E-value=3.7e-09 Score=117.53 Aligned_cols=193 Identities=17% Similarity=0.324 Sum_probs=109.5
Q ss_pred cccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHh-------CCCEEEEEeCCHHHHHHHHHHHHhccc
Q 043334 7 IFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKW-------LPSKVYGLDINPRAIRISWINLYLNAL 79 (903)
Q Consensus 7 vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~-------~~~~V~giDis~~al~~A~~n~~~~gl 79 (903)
.|+|+.....+.+.+. ..++.+|+|.+||+|.+.+++.+.. ...+++|+|+++.++.+|+.|+..++.
T Consensus 28 ~~TP~~i~~l~~~~~~-----~~~~~~VlDPacGsG~fL~~~~~~i~~~~~~~~~~~i~G~ei~~~~~~la~~nl~l~~~ 102 (311)
T PF02384_consen 28 FYTPREIVDLMVKLLN-----PKKGDSVLDPACGSGGFLVAAMEYIKEKRNKIKEINIYGIEIDPEAVALAKLNLLLHGI 102 (311)
T ss_dssp C---HHHHHHHHHHHT-----T-TTEEEEETT-TTSHHHHHHHHHHHTCHHHHCCEEEEEEES-HHHHHHHHHHHHHTTH
T ss_pred eehHHHHHHHHHhhhh-----ccccceeechhhhHHHHHHHHHHhhcccccccccceeEeecCcHHHHHHHHhhhhhhcc
Confidence 5788755554445442 2256789999999999999988743 678999999999999999999988776
Q ss_pred ccCCCCcchhhhcccCCcEEEEEccccccccCC-CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccc
Q 043334 80 DEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDH-DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQG 158 (903)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~-~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~ 158 (903)
+ ..+..+..+|.+...... ..+||+|++||||....-... .... ...+..
T Consensus 103 ~--------------~~~~~i~~~d~l~~~~~~~~~~~D~ii~NPPf~~~~~~~~---~~~~------------~~~~~~ 153 (311)
T PF02384_consen 103 D--------------NSNINIIQGDSLENDKFIKNQKFDVIIGNPPFGSKEWKDE---ELEK------------DERFKK 153 (311)
T ss_dssp H--------------CBGCEEEES-TTTSHSCTST--EEEEEEE--CTCES-STG---GGCT------------TCCCTT
T ss_pred c--------------cccccccccccccccccccccccccccCCCCccccccccc---cccc------------cccccc
Confidence 2 123568889987664433 348999999999996511000 0000 000111
Q ss_pred cccccccHHHHHHHHHHHhhcccCCcEEEEEeCCC-----CcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcc
Q 043334 159 FVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGR-----PGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDIS 233 (903)
Q Consensus 159 ~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~-----~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~ 233 (903)
........+. .|+..+.+.|++||++.+.++.. .....+++.+-+.++ +..++. .....|.. +.+.
T Consensus 154 ~~~~~~~~~~--~Fi~~~l~~Lk~~G~~~~Ilp~~~L~~~~~~~~iR~~ll~~~~-i~aVI~-----Lp~~~F~~-t~v~ 224 (311)
T PF02384_consen 154 YFPPKSNAEY--AFIEHALSLLKPGGRAAIILPNGFLFSSSSEKKIRKYLLENGY-IEAVIS-----LPSNLFKP-TGVP 224 (311)
T ss_dssp CSSSTTEHHH--HHHHHHHHTEEEEEEEEEEEEHHHHHGSTHHHHHHHHHHHHEE-EEEEEE-------TTSSSS-SSS-
T ss_pred cCCCccchhh--hhHHHHHhhcccccceeEEecchhhhccchHHHHHHHHHhhch-hhEEee-----cccceecc-cCcC
Confidence 0111122221 48899999999999988866531 123344555544432 222211 22344444 5555
Q ss_pred -eeeeeeccC
Q 043334 234 -ALVEIEKNS 242 (903)
Q Consensus 234 -~l~~~e~~~ 242 (903)
.++.++++.
T Consensus 225 t~ilil~k~~ 234 (311)
T PF02384_consen 225 TSILILNKKK 234 (311)
T ss_dssp EEEEEEEESS
T ss_pred ceEEEEeecc
Confidence 466677765
No 378
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional
Probab=99.06 E-value=2.3e-09 Score=114.13 Aligned_cols=130 Identities=19% Similarity=0.326 Sum_probs=95.6
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++....+. ++++..+|+.+.
T Consensus 47 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~-----------------~~~~~~~~~~~~ 107 (233)
T PRK05134 47 LFGKRVLDVGCGGGILSESMARL--GADVTGIDASEENIEVARLHALESGL-----------------KIDYRQTTAEEL 107 (233)
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEcCCHHHHHHHHHHHHHcCC-----------------ceEEEecCHHHh
Confidence 36789999999999999998876 57899999999999999998866553 578888888776
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....++||+|+++-.+...+ ....+++.+.+.|+|||.+++
T Consensus 108 ~~~~~~~fD~Ii~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~~gG~l~v 149 (233)
T PRK05134 108 AAEHPGQFDVVTCMEMLEHVP--------------------------------------DPASFVRACAKLVKPGGLVFF 149 (233)
T ss_pred hhhcCCCccEEEEhhHhhccC--------------------------------------CHHHHHHHHHHHcCCCcEEEE
Confidence 533334899998632111100 012678999999999999998
Q ss_pred EeCCC-----------------------------CcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGGR-----------------------------PGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~~-----------------------------~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
..... .....+.+++++.||..+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~ 205 (233)
T PRK05134 150 STLNRNLKSYLLAIVGAEYVLRMLPKGTHDYKKFIKPSELAAWLRQAGLEVQDITG 205 (233)
T ss_pred EecCCChHHHHHHHhhHHHHhhhcCcccCchhhcCCHHHHHHHHHHCCCeEeeeee
Confidence 54321 1233466788888888877643
No 379
>PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A.
Probab=99.06 E-value=5.4e-11 Score=109.03 Aligned_cols=99 Identities=23% Similarity=0.372 Sum_probs=60.7
Q ss_pred EEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCC
Q 043334 35 AELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDI 114 (903)
Q Consensus 35 LDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~ 114 (903)
||+|||+|.++..+++.++..+++|+|+|+.|++.|++++...... ....+++...|..+.... +
T Consensus 1 LdiGcG~G~~~~~l~~~~~~~~~~~~D~s~~~l~~a~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~--~ 65 (99)
T PF08242_consen 1 LDIGCGTGRLLRALLEELPDARYTGVDISPSMLERARERLAELGND-------------NFERLRFDVLDLFDYDPP--E 65 (99)
T ss_dssp -EESTTTS-TTTTHHHHC-EEEEEEEESSSSTTSTTCCCHHHCT----------------EEEEE--SSS---CCC----
T ss_pred CEeCccChHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhcCCc-------------ceeEEEeecCChhhcccc--c
Confidence 7999999999999999988899999999999999998888766531 001233444443333222 3
Q ss_pred ceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 115 QLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 115 ~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+||+|+++-.... + +....+++.++++|||||++
T Consensus 66 ~fD~V~~~~vl~~------l--------------------------------~~~~~~l~~~~~~L~pgG~l 99 (99)
T PF08242_consen 66 SFDLVVASNVLHH------L--------------------------------EDIEAVLRNIYRLLKPGGIL 99 (99)
T ss_dssp --SEEEEE-TTS----------------------------------------S-HHHHHHHHTTT-TSS-EE
T ss_pred ccceehhhhhHhh------h--------------------------------hhHHHHHHHHHHHcCCCCCC
Confidence 8999986422221 1 11347899999999999986
No 380
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=99.06 E-value=2.6e-09 Score=109.96 Aligned_cols=133 Identities=17% Similarity=0.191 Sum_probs=87.1
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
+.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+ .. ++++++++|+.
T Consensus 30 i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----------~~----------------~~i~~~~~d~~ 82 (188)
T TIGR00438 30 IKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----------PI----------------ENVDFIRGDFT 82 (188)
T ss_pred cCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----------cC----------------CCceEEEeeCC
Confidence 4578999999999999999998876 45689999999864 11 35778888886
Q ss_pred cccc-------CCCCceeEEEECC--CCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHh
Q 043334 107 AYCR-------DHDIQLERIVGCI--PQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGI 177 (903)
Q Consensus 107 ~~~~-------~~~~~fD~Iv~Np--Py~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~ 177 (903)
+... ...++||+|++|+ ++.......... ..+....+++.+.
T Consensus 83 ~~~~~~~l~~~~~~~~~D~V~~~~~~~~~g~~~~~~~~-----------------------------~~~~~~~~l~~~~ 133 (188)
T TIGR00438 83 DEEVLNKIRERVGDDKVDVVMSDAAPNISGYWDIDHLR-----------------------------SIDLVELALDIAK 133 (188)
T ss_pred ChhHHHHHHHHhCCCCccEEEcCCCCCCCCCccccHHH-----------------------------HHHHHHHHHHHHH
Confidence 5420 1123799999874 222111111100 0112347899999
Q ss_pred hcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 178 GVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 178 ~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
++|+|||++++..........+...+++ +|....+.++.
T Consensus 134 ~~LkpgG~lvi~~~~~~~~~~~l~~l~~-~~~~~~~~~~~ 172 (188)
T TIGR00438 134 EVLKPKGNFVVKVFQGEEIDEYLNELRK-LFEKVKVTKPQ 172 (188)
T ss_pred HHccCCCEEEEEEccCccHHHHHHHHHh-hhceEEEeCCC
Confidence 9999999999976554444343344444 47666664443
No 381
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional
Probab=99.05 E-value=9.7e-10 Score=119.90 Aligned_cols=103 Identities=27% Similarity=0.374 Sum_probs=79.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP---SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~---~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
.+.+|||+|||+|.++..+++..+. .+|+|+|+|+.|++.|+++. +++.+.++|+.
T Consensus 85 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~---------------------~~~~~~~~d~~ 143 (272)
T PRK11088 85 KATALLDIGCGEGYYTHALADALPEITTMQLFGLDISKVAIKYAAKRY---------------------PQVTFCVASSH 143 (272)
T ss_pred CCCeEEEECCcCCHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhC---------------------CCCeEEEeecc
Confidence 4568999999999999999887653 47999999999999998663 36889999998
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+++... ++||+|+++ ..+ ..++++.++|||||.+
T Consensus 144 ~lp~~~-~sfD~I~~~----~~~-----------------------------------------~~~~e~~rvLkpgG~l 177 (272)
T PRK11088 144 RLPFAD-QSLDAIIRI----YAP-----------------------------------------CKAEELARVVKPGGIV 177 (272)
T ss_pred cCCCcC-CceeEEEEe----cCC-----------------------------------------CCHHHHHhhccCCCEE
Confidence 875443 489999853 100 2256788999999999
Q ss_pred EEEeCCCCcHHHH
Q 043334 187 IFNMGGRPGQGVC 199 (903)
Q Consensus 187 l~~~~~~~~~~~l 199 (903)
++..+.......+
T Consensus 178 i~~~p~~~~l~el 190 (272)
T PRK11088 178 ITVTPGPRHLFEL 190 (272)
T ss_pred EEEeCCCcchHHH
Confidence 9987665444333
No 382
>PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C ....
Probab=99.05 E-value=9.6e-10 Score=109.20 Aligned_cols=117 Identities=24% Similarity=0.329 Sum_probs=79.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++. . ++.....+....
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~g~D~~~~~~~~------~--------------------~~~~~~~~~~~~ 72 (161)
T PF13489_consen 21 KPGKRVLDIGCGTGSFLRALAKR--GFEVTGVDISPQMIEK------R--------------------NVVFDNFDAQDP 72 (161)
T ss_dssp TTTSEEEEESSTTSHHHHHHHHT--TSEEEEEESSHHHHHH------T--------------------TSEEEEEECHTH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHhh------h--------------------hhhhhhhhhhhh
Confidence 46789999999999999999776 5699999999999988 1 112222222222
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... .++||+|+++--.. ++. ....+++++.++|||||.+++
T Consensus 73 ~~~-~~~fD~i~~~~~l~------~~~--------------------------------d~~~~l~~l~~~LkpgG~l~~ 113 (161)
T PF13489_consen 73 PFP-DGSFDLIICNDVLE------HLP--------------------------------DPEEFLKELSRLLKPGGYLVI 113 (161)
T ss_dssp HCH-SSSEEEEEEESSGG------GSS--------------------------------HHHHHHHHHHHCEEEEEEEEE
T ss_pred hcc-ccchhhHhhHHHHh------hcc--------------------------------cHHHHHHHHHHhcCCCCEEEE
Confidence 222 23899999741111 111 133789999999999999999
Q ss_pred EeCCCC-----------------------cHHHHHHHHHHCCCeEEE
Q 043334 189 NMGGRP-----------------------GQGVCKRLFERRGFRVDK 212 (903)
Q Consensus 189 ~~~~~~-----------------------~~~~l~~ll~~~gf~~~~ 212 (903)
...... ....++++++++||++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G~~iv~ 160 (161)
T PF13489_consen 114 SDPNRDDPSPRSFLKWRYDRPYGGHVHFFSPDELRQLLEQAGFEIVE 160 (161)
T ss_dssp EEEBTTSHHHHHHHHCCGTCHHTTTTEEBBHHHHHHHHHHTTEEEEE
T ss_pred EEcCCcchhhhHHHhcCCcCccCceeccCCHHHHHHHHHHCCCEEEE
Confidence 655421 334556677777777654
No 383
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.04 E-value=7.6e-10 Score=109.67 Aligned_cols=93 Identities=11% Similarity=0.180 Sum_probs=77.1
Q ss_pred CCCCeEEccCCCCC-----------------CCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcC--CCCCCCC
Q 043334 613 PNSGLIHMDVDQSF-----------------LPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFG--FPIDINA 673 (903)
Q Consensus 613 ~~~~~IdLs~g~p~-----------------~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G--~~~~pe~ 673 (903)
.+.++|+|++.+|. +.+|+.+++++.+ +..|....|.+++|+++++|+.+++| ++.+|+
T Consensus 41 np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~-~a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd- 118 (153)
T PLN02994 41 NPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKD-IALFQDYHGLANFRKAIANFMAEARGGRVKFDAD- 118 (153)
T ss_pred CCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHH-HhcCCCCCCcHHHHHHHHHHHHHHhCCCCccchh-
Confidence 45568888888763 3344554555555 34588888999999999999999988 677887
Q ss_pred cEEecCchHHHHHHHHHHhccCCCeEEEcCCCcH
Q 043334 674 EFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNG 707 (903)
Q Consensus 674 ~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~ 707 (903)
+|++|+|+++++..++.++++|||.|++++|+|+
T Consensus 119 ~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 119 MIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred heEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 9999999999999999999999999999999996
No 384
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=99.04 E-value=2e-09 Score=112.97 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=62.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..+..+++.. .+|+++|+++++++.|++|+..+++ .++++.++|..+..
T Consensus 78 ~~~~VLeiG~GsG~~t~~la~~~--~~v~~vd~~~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~~~ 139 (212)
T PRK00312 78 PGDRVLEIGTGSGYQAAVLAHLV--RRVFSVERIKTLQWEAKRRLKQLGL----------------HNVSVRHGDGWKGW 139 (212)
T ss_pred CCCEEEEECCCccHHHHHHHHHh--CEEEEEeCCHHHHHHHHHHHHHCCC----------------CceEEEECCcccCC
Confidence 56899999999999999888774 4899999999999999999988776 46999999987654
Q ss_pred cCCCCceeEEEEC
Q 043334 110 RDHDIQLERIVGC 122 (903)
Q Consensus 110 ~~~~~~fD~Iv~N 122 (903)
... ++||+|+++
T Consensus 140 ~~~-~~fD~I~~~ 151 (212)
T PRK00312 140 PAY-APFDRILVT 151 (212)
T ss_pred CcC-CCcCEEEEc
Confidence 332 489999864
No 385
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=99.03 E-value=2e-09 Score=112.56 Aligned_cols=126 Identities=21% Similarity=0.231 Sum_probs=104.3
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
+.+|.+|+|.|+|||.++..|+...++ .+|+.+|+.++..+.|++|+...++ .+++++..+|+.
T Consensus 92 i~pg~rVlEAGtGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l---------------~d~v~~~~~Dv~ 156 (256)
T COG2519 92 ISPGSRVLEAGTGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGL---------------GDRVTLKLGDVR 156 (256)
T ss_pred CCCCCEEEEcccCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhcc---------------ccceEEEecccc
Confidence 457899999999999999999986644 7999999999999999999998877 356999999999
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+..... .||+|+.. .+++ | ++++.+.+.|||||.+
T Consensus 157 ~~~~~~--~vDav~LD-----mp~P-----------W---------------------------~~le~~~~~Lkpgg~~ 191 (256)
T COG2519 157 EGIDEE--DVDAVFLD-----LPDP-----------W---------------------------NVLEHVSDALKPGGVV 191 (256)
T ss_pred cccccc--ccCEEEEc-----CCCh-----------H---------------------------HHHHHHHHHhCCCcEE
Confidence 987665 89999832 1110 0 6799999999999999
Q ss_pred EEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 187 IFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 187 l~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
++..+.........+.+++.||...+.
T Consensus 192 ~~y~P~veQv~kt~~~l~~~g~~~ie~ 218 (256)
T COG2519 192 VVYSPTVEQVEKTVEALRERGFVDIEA 218 (256)
T ss_pred EEEcCCHHHHHHHHHHHHhcCccchhh
Confidence 998887766666667788889876655
No 386
>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase. This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase.
Probab=99.03 E-value=5.2e-09 Score=110.49 Aligned_cols=106 Identities=17% Similarity=0.284 Sum_probs=81.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
..+.+|||+|||+|.++..+++. +.+++|+|+++.+++.+++++..++. .++.+..+|+.+.
T Consensus 44 ~~~~~vLdlG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~----------------~~~~~~~~d~~~~ 105 (224)
T TIGR01983 44 LFGLRVLDVGCGGGLLSEPLARL--GANVTGIDASEENIEVAKLHAKKDPL----------------LKIEYRCTSVEDL 105 (224)
T ss_pred CCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHcCC----------------CceEEEeCCHHHh
Confidence 35789999999999999998875 46799999999999999999876654 2588999998877
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....++||+|+++-..... .....+++++.+.|+|||.+++
T Consensus 106 ~~~~~~~~D~i~~~~~l~~~--------------------------------------~~~~~~l~~~~~~L~~gG~l~i 147 (224)
T TIGR01983 106 AEKGAKSFDVVTCMEVLEHV--------------------------------------PDPQAFIRACAQLLKPGGILFF 147 (224)
T ss_pred hcCCCCCccEEEehhHHHhC--------------------------------------CCHHHHHHHHHHhcCCCcEEEE
Confidence 54433489999853111100 0023678999999999999887
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 148 ~~ 149 (224)
T TIGR01983 148 ST 149 (224)
T ss_pred Ee
Confidence 54
No 387
>PLN03075 nicotianamine synthase; Provisional
Probab=99.03 E-value=2.3e-09 Score=116.45 Aligned_cols=109 Identities=17% Similarity=0.207 Sum_probs=81.7
Q ss_pred CCCeEEEeCCccCHH-HH-HHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 30 KDKTVAELGCGNGWI-TI-AIAEKWLPSKVYGLDINPRAIRISWINLYL-NALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 30 ~~~~VLDlGCGtG~l-si-~la~~~~~~~V~giDis~~al~~A~~n~~~-~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
.+++|+|+|||.|-+ ++ .++..+|+.+++|+|+|+++++.|++++.. .++ .++++|..+|+.
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL---------------~~rV~F~~~Da~ 187 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDL---------------SKRMFFHTADVM 187 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCc---------------cCCcEEEECchh
Confidence 568999999998844 33 334567888999999999999999999854 555 368999999998
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+.... .++||+|++. -.+ ++.+ +...++++.+.+.|+|||.+
T Consensus 188 ~~~~~-l~~FDlVF~~-ALi------~~dk------------------------------~~k~~vL~~l~~~LkPGG~L 229 (296)
T PLN03075 188 DVTES-LKEYDVVFLA-ALV------GMDK------------------------------EEKVKVIEHLGKHMAPGALL 229 (296)
T ss_pred hcccc-cCCcCEEEEe-ccc------cccc------------------------------ccHHHHHHHHHHhcCCCcEE
Confidence 86433 2389999853 111 1110 11337899999999999999
Q ss_pred EEEeC
Q 043334 187 IFNMG 191 (903)
Q Consensus 187 l~~~~ 191 (903)
++...
T Consensus 230 vlr~~ 234 (296)
T PLN03075 230 MLRSA 234 (296)
T ss_pred EEecc
Confidence 99764
No 388
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.03 E-value=3.7e-08 Score=114.31 Aligned_cols=246 Identities=14% Similarity=0.103 Sum_probs=152.5
Q ss_pred cCCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCCC-C-C-chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNMS-E-S-EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~~-~-G-~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..| ...++ ..|.+.+++.+.+.+.... . + ..+.+..+++.+.+......+ .++++++++++
T Consensus 38 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~---~v~f~~sGseA 114 (423)
T PRK05964 38 LADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLD---HVFFSDSGSVA 114 (423)
T ss_pred eCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCC---EEEEeCCcHHH
Confidence 3467788999766 34444 4678889988887763321 1 1 345567788888776432223 79999999998
Q ss_pred HHHHHHHhcc-------CC-CeEEEcCCCcHHHHHHHHH-cCC------------EEEEecCCCCCCcccCHHHHHHHhh
Q 043334 685 FNKLVLCCIL-------EG-GTLCFPAGSNGNYVSAARF-LKA------------NIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 685 l~~ll~~l~~-------pG-D~Vlv~~P~y~~~~~~~~~-~G~------------~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
...++..... +| .+|+...-+|.+....+.. .+- .+..++....+....+.+.+++.+.
T Consensus 115 ~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~ 194 (423)
T PRK05964 115 VEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLE 194 (423)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHH
Confidence 8887765421 23 4687777777654332221 111 1122222111100112677887775
Q ss_pred cCC-CcEEEEECCC-CCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc
Q 043334 744 TVK-KPWVYISGPT-INPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN 820 (903)
Q Consensus 744 ~~~-~~~vil~~P~-~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~ 820 (903)
... ..+.++.-|. |+..|... +.+.+++|.++|++||+++|.||++.++-..|... . .....-.+
T Consensus 195 ~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~---a----~~~~~v~p----- 262 (423)
T PRK05964 195 KHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF---A----CEQAGVSP----- 262 (423)
T ss_pred hCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh---H----HHhcCCCC-----
Confidence 321 2345566774 67788766 89999999999999999999999997664444221 0 11111111
Q ss_pred eEEEccCchhcccccceeeEEEeCcHHHHHHHHhC-------C-CCCCCcHHHHHHHHHHHh
Q 043334 821 VSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSF-------P-GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 821 vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~-------~-~~~~~s~~~Q~aa~~~L~ 874 (903)
-+-++||.++..++++|+++++++ +.+.+... . .+.+.+.+.-.++.+.|+
T Consensus 263 --Di~~~~K~l~gG~~p~~av~~~~~-i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~ 321 (423)
T PRK05964 263 --DIMCLSKGLTGGYLPLAATLCTAE-IFEAFYSDDRAKAFMHSPSYTANPLACAAANASLD 321 (423)
T ss_pred --CeeeeehhhhcCcccceEEEEcHH-HHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHH
Confidence 134789999754489999988877 88887532 1 134567777777777774
No 389
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases. Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.
Probab=99.02 E-value=8.3e-09 Score=108.42 Aligned_cols=103 Identities=22% Similarity=0.294 Sum_probs=80.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..+++.++. .+++|+|+++.+++.++++.. . ..++.++.+|+.+.
T Consensus 39 ~~~~vldiG~G~G~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~---~---------------~~~i~~~~~d~~~~ 100 (223)
T TIGR01934 39 KGQKVLDVACGTGDLAIELAKSAPDRGKVTGVDFSSEMLEVAKKKSE---L---------------PLNIEFIQADAEAL 100 (223)
T ss_pred CCCeEEEeCCCCChhHHHHHHhcCCCceEEEEECCHHHHHHHHHHhc---c---------------CCCceEEecchhcC
Confidence 5789999999999999999998765 699999999999999998874 1 24789999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+++-..... .....+++.+.+.|+|||.+++
T Consensus 101 ~~~~-~~~D~i~~~~~~~~~--------------------------------------~~~~~~l~~~~~~L~~gG~l~~ 141 (223)
T TIGR01934 101 PFED-NSFDAVTIAFGLRNV--------------------------------------TDIQKALREMYRVLKPGGRLVI 141 (223)
T ss_pred CCCC-CcEEEEEEeeeeCCc--------------------------------------ccHHHHHHHHHHHcCCCcEEEE
Confidence 5433 489999864211100 0023679999999999999987
Q ss_pred E
Q 043334 189 N 189 (903)
Q Consensus 189 ~ 189 (903)
.
T Consensus 142 ~ 142 (223)
T TIGR01934 142 L 142 (223)
T ss_pred E
Confidence 3
No 390
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.02 E-value=6.5e-08 Score=112.86 Aligned_cols=271 Identities=10% Similarity=0.025 Sum_probs=158.9
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCC--CC-CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNM--SE-SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~--~~-G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..|. ..++ .++.+.+++.+.+..... .. -..+.+..+++.+.+...........++++++++++
T Consensus 35 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA 114 (442)
T TIGR00709 35 DVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA 114 (442)
T ss_pred eCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence 35677899997664 3333 577888998888765321 11 123556778888877653211112135666777887
Q ss_pred HHHHHHHhcc-CC-CeEEEcCCCcHHHHHHHHH-cC------------CEEEEecCCCC--CCccc----CH----HHHH
Q 043334 685 FNKLVLCCIL-EG-GTLCFPAGSNGNYVSAARF-LK------------ANIVNIPTESE--VGFKM----TE----KTLV 739 (903)
Q Consensus 685 l~~ll~~l~~-pG-D~Vlv~~P~y~~~~~~~~~-~G------------~~vv~v~~~~~--~~f~l----d~----~~L~ 739 (903)
...++..... .| ..|+...-+|-+....+.. .| ..+..++.... ..|+. +. +.++
T Consensus 115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 7776654321 23 4677777777665433322 22 01222222110 00110 11 2233
Q ss_pred HHhhc-----CCCcEEEEECCC-CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc
Q 043334 740 TILET-----VKKPWVYISGPT-INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS 813 (903)
Q Consensus 740 ~~l~~-----~~~~~vil~~P~-~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~ 813 (903)
+.+.. ... +.++.-|- .|+...+.+.+.+++|.++|++||+++|.||++.++-..|..+ . ...++-
T Consensus 195 ~~~~~~~~~~~~i-aavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~---a----~~~~gv 266 (442)
T TIGR00709 195 NFIEDVESGVDKP-AAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMF---A----FEHAGI 266 (442)
T ss_pred HHHHhhccCCCce-EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh---H----HHHcCC
Confidence 33321 222 34444455 4554556899999999999999999999999998876655432 1 122222
Q ss_pred CCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHh-CC-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHH
Q 043334 814 STNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSS-FP-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHI 891 (903)
Q Consensus 814 ~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~-~~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r 891 (903)
.| .|++ +||.++. |+++|+++++++ + +.+.. .. .+.+.++.++.++.+.|+.-.. +.+.++.+++.
T Consensus 267 ~P-----Div~--~gK~l~~-G~Pigav~~~~~-~-~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~g 334 (442)
T TIGR00709 267 EP-----DFVV--MSKAVGG-GLPLAVLLIAPE-F-DAWQPAGHTGTFRGNQLAMVTGTEALNYWKD--DNLAQNAQERG 334 (442)
T ss_pred CC-----cEEE--EcccccC-CcccEEEEEchH-H-hccCCCcCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHH
Confidence 22 2333 8999986 999999999876 4 44432 12 3777889999999999953111 24556666666
Q ss_pred HHHHHHHHHH
Q 043334 892 RNLESRSKRL 901 (903)
Q Consensus 892 ~~y~~Rr~~l 901 (903)
+.++++.+.+
T Consensus 335 ~~l~~~L~~l 344 (442)
T TIGR00709 335 ERITSFLDDM 344 (442)
T ss_pred HHHHHHHHHH
Confidence 6666665544
No 391
>PRK03612 spermidine synthase; Provisional
Probab=99.02 E-value=3.2e-09 Score=125.82 Aligned_cols=143 Identities=16% Similarity=0.194 Sum_probs=99.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++++|||+|||+|..+..+++. +. .+|+++|+|+++++.+++|.....+.. ..-..++++++.+|..++
T Consensus 297 ~~~rVL~IG~G~G~~~~~ll~~-~~v~~v~~VEid~~vi~~ar~~~~l~~~~~---------~~~~dprv~vi~~Da~~~ 366 (521)
T PRK03612 297 RPRRVLVLGGGDGLALREVLKY-PDVEQVTLVDLDPAMTELARTSPALRALNG---------GALDDPRVTVVNDDAFNW 366 (521)
T ss_pred CCCeEEEEcCCccHHHHHHHhC-CCcCeEEEEECCHHHHHHHHhCCcchhhhc---------cccCCCceEEEEChHHHH
Confidence 5689999999999999998874 44 799999999999999998643222100 000125899999999987
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....++||+|++|+|....+....+ . ...+++.+.+.|||||.+++
T Consensus 367 l~~~~~~fDvIi~D~~~~~~~~~~~L---~------------------------------t~ef~~~~~~~L~pgG~lv~ 413 (521)
T PRK03612 367 LRKLAEKFDVIIVDLPDPSNPALGKL---Y------------------------------SVEFYRLLKRRLAPDGLLVV 413 (521)
T ss_pred HHhCCCCCCEEEEeCCCCCCcchhcc---c------------------------------hHHHHHHHHHhcCCCeEEEE
Confidence 65444589999999775432211100 0 12678999999999999999
Q ss_pred EeCCCCc-H---HHHHHHHHHCCCeEEEEEeh
Q 043334 189 NMGGRPG-Q---GVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 189 ~~~~~~~-~---~~l~~ll~~~gf~~~~~~~~ 216 (903)
...+... . ..+.+.+++.|| .+..+..
T Consensus 414 ~~~~~~~~~~~~~~i~~~l~~~gf-~v~~~~~ 444 (521)
T PRK03612 414 QSTSPYFAPKAFWSIEATLEAAGL-ATTPYHV 444 (521)
T ss_pred ecCCcccchHHHHHHHHHHHHcCC-EEEEEEe
Confidence 7653321 1 234567888899 4444333
No 392
>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase. Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme
Probab=99.01 E-value=1.8e-09 Score=112.65 Aligned_cols=70 Identities=20% Similarity=0.255 Sum_probs=59.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..+..+++..++.+++|+|+|++|++.|+++. +++.+.++|+.+..
T Consensus 43 ~~~~VLDiGCG~G~~~~~L~~~~~~~~v~giDiS~~~l~~A~~~~---------------------~~~~~~~~d~~~~~ 101 (204)
T TIGR03587 43 KIASILELGANIGMNLAALKRLLPFKHIYGVEINEYAVEKAKAYL---------------------PNINIIQGSLFDPF 101 (204)
T ss_pred CCCcEEEEecCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHhhC---------------------CCCcEEEeeccCCC
Confidence 577999999999999999998877889999999999999998764 25678899988732
Q ss_pred cCCCCceeEEEEC
Q 043334 110 RDHDIQLERIVGC 122 (903)
Q Consensus 110 ~~~~~~fD~Iv~N 122 (903)
. .++||+|++|
T Consensus 102 -~-~~sfD~V~~~ 112 (204)
T TIGR03587 102 -K-DNFFDLVLTK 112 (204)
T ss_pred -C-CCCEEEEEEC
Confidence 2 3489999965
No 393
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.00 E-value=6.4e-08 Score=111.89 Aligned_cols=273 Identities=11% Similarity=0.100 Sum_probs=157.8
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCC---CchHHHHHHHHHHHhhcCCCCCCCCcEEe-cCchHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSE---SEIDVTPSIQQYIKSNFGFPIDINAEFIY-ADCSQS 683 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~---G~~~lr~ala~~l~~~~G~~~~pe~~I~v-t~Gs~~ 683 (903)
...|...||+..|. ..++ .++.+.+++.+.+.+..... ...+.+..+++.+.+....+......+++ ++++++
T Consensus 31 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 110 (412)
T TIGR02407 31 DEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN 110 (412)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence 35678899986553 3344 57888999988876432211 12455666777776643111111113544 567777
Q ss_pred HHHHHHHHhcc-CC-CeEEEcCCCcHHHHHHH-HHcCC------------EEEEecCCCCCCc-ccCHHHHHHHhhcC--
Q 043334 684 LFNKLVLCCIL-EG-GTLCFPAGSNGNYVSAA-RFLKA------------NIVNIPTESEVGF-KMTEKTLVTILETV-- 745 (903)
Q Consensus 684 al~~ll~~l~~-pG-D~Vlv~~P~y~~~~~~~-~~~G~------------~vv~v~~~~~~~f-~ld~~~L~~~l~~~-- 745 (903)
+...++..... .| .+|+....+|-+....+ ...|. .++.+|....... .-+++.+++.+...
T Consensus 111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 190 (412)
T TIGR02407 111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS 190 (412)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence 77766654321 23 56777777665543322 22221 2222332110000 01356677777532
Q ss_pred --CCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 746 --KKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 746 --~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
...+.++.-|-|++.|. +.+.+.+++|.++|+++|+++|+||++.++--.|.. +. .....-.| |
T Consensus 191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~---~a----~~~~~v~P---D--- 257 (412)
T TIGR02407 191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTF---FS----FEPAGIEP---D--- 257 (412)
T ss_pred CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchh---HH----hcccCCCC---C---
Confidence 11255566677899998 679999999999999999999999999764222221 11 01111122 2
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhc-ccccchhHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGL-RERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~-~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
+.+|||.++..|+|+|+++++++ + +.+.... .+.+.+.+.-.++.+.|+. -. .+.+.++++++.+.++++.+
T Consensus 258 -i~~~~K~lg~~G~pigav~~~~~-~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~--~~~l~~~~~~~g~~l~~~l~ 332 (412)
T TIGR02407 258 -IVCLSKSISGYGLPLALTLIKPE-L-DVWKPGEHNGTFRGNNLAFVTATAALEYYWS--DDAFEKAVQRKSEIIQERLD 332 (412)
T ss_pred -EEEechhccCCccceeEEEEchh-h-hccCCCccCCCCCccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHH
Confidence 33589999733999999999876 5 5543221 2555566655555555531 11 13466778888888888776
Q ss_pred HH
Q 043334 900 RL 901 (903)
Q Consensus 900 ~l 901 (903)
.+
T Consensus 333 ~l 334 (412)
T TIGR02407 333 RI 334 (412)
T ss_pred HH
Confidence 54
No 394
>TIGR00095 RNA methyltransferase, RsmD family. This model represents a family of uncharacterized bacterial proteins. Members are present in nearly every complete bacterial genome, always in a single copy. PSI-BLAST analysis shows homology to several families of SAM-dependent methyltransferases, including ribosomal RNA adenine dimethylases.
Probab=99.00 E-value=4e-09 Score=108.63 Aligned_cols=83 Identities=12% Similarity=0.006 Sum_probs=68.6
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||++||+|.+++.++.+ +..+|+++|+++.+++.+++|+..++++ ++++++++|..+.
T Consensus 48 ~~g~~vLDLfaGsG~lglea~sr-ga~~v~~vE~~~~a~~~~~~N~~~~~~~---------------~~~~~~~~D~~~~ 111 (189)
T TIGR00095 48 IQGAHLLDVFAGSGLLGEEALSR-GAKVAFLEEDDRKANQTLKENLALLKSG---------------EQAEVVRNSALRA 111 (189)
T ss_pred cCCCEEEEecCCCcHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHhCCc---------------ccEEEEehhHHHH
Confidence 35789999999999999998887 3459999999999999999999998872 4799999999765
Q ss_pred ccC---CCCceeEEEECCCCCC
Q 043334 109 CRD---HDIQLERIVGCIPQIL 127 (903)
Q Consensus 109 ~~~---~~~~fD~Iv~NpPy~~ 127 (903)
... ....||+|+.+|||..
T Consensus 112 l~~~~~~~~~~dvv~~DPPy~~ 133 (189)
T TIGR00095 112 LKFLAKKPTFDNVIYLDPPFFN 133 (189)
T ss_pred HHHhhccCCCceEEEECcCCCC
Confidence 321 1124899999999973
No 395
>PRK05785 hypothetical protein; Provisional
Probab=99.00 E-value=2.6e-09 Score=113.22 Aligned_cols=82 Identities=11% Similarity=0.199 Sum_probs=62.3
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhh
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEK 91 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~ 91 (903)
.|...+.+.+..... ++.+|||+|||||.++..+++.. +.+|+|+|+|++|++.|+++.
T Consensus 36 ~wr~~~~~~l~~~~~---~~~~VLDlGcGtG~~~~~l~~~~-~~~v~gvD~S~~Ml~~a~~~~----------------- 94 (226)
T PRK05785 36 RWRAELVKTILKYCG---RPKKVLDVAAGKGELSYHFKKVF-KYYVVALDYAENMLKMNLVAD----------------- 94 (226)
T ss_pred HHHHHHHHHHHHhcC---CCCeEEEEcCCCCHHHHHHHHhc-CCEEEEECCCHHHHHHHHhcc-----------------
Confidence 465555555544322 36799999999999999999876 579999999999999997531
Q ss_pred cccCCcEEEEEccccccccCCCCceeEEEEC
Q 043334 92 KTLLDRVEFHESDLLAYCRDHDIQLERIVGC 122 (903)
Q Consensus 92 ~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~N 122 (903)
.++++|+.+++..+ ++||+|+++
T Consensus 95 -------~~~~~d~~~lp~~d-~sfD~v~~~ 117 (226)
T PRK05785 95 -------DKVVGSFEALPFRD-KSFDVVMSS 117 (226)
T ss_pred -------ceEEechhhCCCCC-CCEEEEEec
Confidence 24678888876544 489999975
No 396
>PRK00811 spermidine synthase; Provisional
Probab=99.00 E-value=4.1e-09 Score=115.51 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=96.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++||++|||+|..+..+++..+..+|+++|+|+++++.|++++...+.. ..-.++++++.+|...+.
T Consensus 76 ~p~~VL~iG~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~-----------~~~d~rv~v~~~Da~~~l 144 (283)
T PRK00811 76 NPKRVLIIGGGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGG-----------AYDDPRVELVIGDGIKFV 144 (283)
T ss_pred CCCEEEEEecCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccc-----------cccCCceEEEECchHHHH
Confidence 468999999999999999887645579999999999999999987543210 001368999999998876
Q ss_pred cCCCCceeEEEECC--CCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 110 RDHDIQLERIVGCI--PQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 110 ~~~~~~fD~Iv~Np--Py~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
....++||+|+++. |+.. ... . ....+++.+.+.|+|||+++
T Consensus 145 ~~~~~~yDvIi~D~~dp~~~--~~~----l------------------------------~t~ef~~~~~~~L~~gGvlv 188 (283)
T PRK00811 145 AETENSFDVIIVDSTDPVGP--AEG----L------------------------------FTKEFYENCKRALKEDGIFV 188 (283)
T ss_pred hhCCCcccEEEECCCCCCCc--hhh----h------------------------------hHHHHHHHHHHhcCCCcEEE
Confidence 54445899999863 3311 000 0 01367899999999999999
Q ss_pred EEeCCCC-cHHHHHH---HHHHCCCeEEEEEehh
Q 043334 188 FNMGGRP-GQGVCKR---LFERRGFRVDKLWQTK 217 (903)
Q Consensus 188 ~~~~~~~-~~~~l~~---ll~~~gf~~~~~~~~~ 217 (903)
+..+... ....+.. .+++. |..+..+...
T Consensus 189 ~~~~~~~~~~~~~~~i~~tl~~~-F~~v~~~~~~ 221 (283)
T PRK00811 189 AQSGSPFYQADEIKDMHRKLKEV-FPIVRPYQAA 221 (283)
T ss_pred EeCCCcccCHHHHHHHHHHHHHH-CCCEEEEEeE
Confidence 9765432 2223232 33333 6666665444
No 397
>PRK01581 speE spermidine synthase; Validated
Probab=99.00 E-value=4.7e-09 Score=116.39 Aligned_cols=142 Identities=15% Similarity=0.149 Sum_probs=96.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
..++||++|||+|..+..+.+..+..+|+++|+|+++++.|++......+. .+....++++++.+|..++.
T Consensus 150 ~PkrVLIIGgGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~---------~~~~~DpRV~vvi~Da~~fL 220 (374)
T PRK01581 150 DPKRVLILGGGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLN---------KSAFFDNRVNVHVCDAKEFL 220 (374)
T ss_pred CCCEEEEECCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhc---------cccCCCCceEEEECcHHHHH
Confidence 467999999999998888877544579999999999999999632111000 00011368999999999976
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|+.++|.-.... .... .-..+++.+.+.|+|||++++.
T Consensus 221 ~~~~~~YDVIIvDl~DP~~~~---~~~L------------------------------yT~EFy~~~~~~LkPgGV~V~Q 267 (374)
T PRK01581 221 SSPSSLYDVIIIDFPDPATEL---LSTL------------------------------YTSELFARIATFLTEDGAFVCQ 267 (374)
T ss_pred HhcCCCccEEEEcCCCccccc---hhhh------------------------------hHHHHHHHHHHhcCCCcEEEEe
Confidence 555558999998755321110 0000 0137899999999999999987
Q ss_pred eCCCCcH----HHHHHHHHHCCCeEEEE
Q 043334 190 MGGRPGQ----GVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~~~~~----~~l~~ll~~~gf~~~~~ 213 (903)
.++.... ..+.+.+++.++.....
T Consensus 268 s~sp~~~~~~~~~i~~tL~~af~~v~~y 295 (374)
T PRK01581 268 SNSPADAPLVYWSIGNTIEHAGLTVKSY 295 (374)
T ss_pred cCChhhhHHHHHHHHHHHHHhCCceEEE
Confidence 6544322 22356778887766544
No 398
>PF10672 Methyltrans_SAM: S-adenosylmethionine-dependent methyltransferase; InterPro: IPR019614 Members of this entry are S-adenosylmethionine-dependent methyltransferases from gamma-proteobacterial species. The diversity in the roles of methylation is matched by the almost bewildering number of methyltransferase enzymes that catalyse the methylation reaction. Although several classes of methyltransferase enzymes are known, the great majority of methylation reactions are catalysed by the S-adenosylmethionine-dependent methyltransferases. SAM (S-adenosylmethionine, also known as AdoMet) is well known as the methyl donor for the majority of methyltransferases that modify DNA, RNA, histones and other proteins, dictating replicational, transcriptional and translational fidelity, mismatch repair, chromatin modelling, epigenetic modifications and imprinting [].; GO: 0008168 methyltransferase activity; PDB: 2IGT_B 1WXX_A 1WXW_D 2CWW_B 2AS0_B 3V8V_B 3V97_A 3C0K_A 2B78_A 3LDF_A.
Probab=99.00 E-value=2.9e-09 Score=115.55 Aligned_cols=131 Identities=21% Similarity=0.257 Sum_probs=92.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+.|-||.++++++. .+..+|+++|.|..+++.|++|+..|+++ .++++++++|++++.
T Consensus 123 ~gkrvLnlFsYTGgfsv~Aa~-gGA~~v~~VD~S~~al~~a~~N~~lNg~~--------------~~~~~~~~~Dvf~~l 187 (286)
T PF10672_consen 123 KGKRVLNLFSYTGGFSVAAAA-GGAKEVVSVDSSKRALEWAKENAALNGLD--------------LDRHRFIQGDVFKFL 187 (286)
T ss_dssp TTCEEEEET-TTTHHHHHHHH-TTESEEEEEES-HHHHHHHHHHHHHTT-C--------------CTCEEEEES-HHHHH
T ss_pred CCCceEEecCCCCHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHcCCC--------------ccceEEEecCHHHHH
Confidence 578999999999999999665 44568999999999999999999999984 257999999998864
Q ss_pred cC--CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 110 RD--HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 110 ~~--~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.. ..++||+||.+||-+...... +. ..|.+++..+.++|+|||.++
T Consensus 188 ~~~~~~~~fD~IIlDPPsF~k~~~~-~~-------------------------------~~y~~L~~~a~~ll~~gG~l~ 235 (286)
T PF10672_consen 188 KRLKKGGRFDLIILDPPSFAKSKFD-LE-------------------------------RDYKKLLRRAMKLLKPGGLLL 235 (286)
T ss_dssp HHHHHTT-EEEEEE--SSEESSTCE-HH-------------------------------HHHHHHHHHHHHTEEEEEEEE
T ss_pred HHHhcCCCCCEEEECCCCCCCCHHH-HH-------------------------------HHHHHHHHHHHHhcCCCCEEE
Confidence 31 234899999999987533211 10 125588999999999999988
Q ss_pred EEeCC-CCcHHHHHHHHHHCC
Q 043334 188 FNMGG-RPGQGVCKRLFERRG 207 (903)
Q Consensus 188 ~~~~~-~~~~~~l~~ll~~~g 207 (903)
+...+ ....+.+.+.+.+.+
T Consensus 236 ~~scs~~i~~~~l~~~~~~~a 256 (286)
T PF10672_consen 236 TCSCSHHISPDFLLEAVAEAA 256 (286)
T ss_dssp EEE--TTS-HHHHHHHHHHHH
T ss_pred EEcCCcccCHHHHHHHHHHhC
Confidence 75543 444455555555543
No 399
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=98.99 E-value=8.9e-08 Score=107.45 Aligned_cols=197 Identities=14% Similarity=0.167 Sum_probs=144.6
Q ss_pred CCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcH
Q 043334 628 PIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNG 707 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~ 707 (903)
+.++.++.++....-. +.+.-...+.+.+.+.++..++.+-. + -++++.+++.++...+..+++|||+|++...+..
T Consensus 15 ~v~~~V~~am~~~~~~-h~s~~F~~~~~~~~~~L~~v~~t~~~-~-~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~F 91 (383)
T COG0075 15 PVPPRVLLAMARPMVG-HRSPDFVGIMKEVLEKLRKVFGTENG-D-VVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKF 91 (383)
T ss_pred CCCHHHHHHhcCCCCC-CCCHHHHHHHHHHHHHHHHHhcCCCC-c-EEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChH
Confidence 4677787776554211 12223344556667777777777621 2 5777788899999999999999999999988776
Q ss_pred H--HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC-CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEE
Q 043334 708 N--YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV-KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVV 784 (903)
Q Consensus 708 ~--~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI 784 (903)
+ +..+++.+|++++.+..... =.+|++++++++++. ..++|.+++-- -+||...+ +++|.++|++||.++|
T Consensus 92 G~R~~~ia~~~g~~v~~~~~~wg--~~v~p~~v~~~L~~~~~~~~V~~vH~E-TSTGvlnp---l~~I~~~~k~~g~l~i 165 (383)
T COG0075 92 GERFAEIAERYGAEVVVLEVEWG--EAVDPEEVEEALDKDPDIKAVAVVHNE-TSTGVLNP---LKEIAKAAKEHGALLI 165 (383)
T ss_pred HHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhcCCCccEEEEEecc-CcccccCc---HHHHHHHHHHcCCEEE
Confidence 6 67789999999999988643 348999999999843 34477777666 79999987 8999999999999999
Q ss_pred EecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccc-ccceeeEEEeCcHHHHHHHH
Q 043334 785 IDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLT-GALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 785 ~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~-~GlRiG~lv~~~~~li~~l~ 853 (903)
+|-+= .+++... .+++ .+-.+++.+-=|.++. || +|++..+++ ..+++.
T Consensus 166 VDaVs---S~Gg~~~----------~vd~----wgiDv~itgSQK~l~~PPG--la~v~~S~~-a~e~~~ 215 (383)
T COG0075 166 VDAVS---SLGGEPL----------KVDE----WGIDVAITGSQKALGAPPG--LAFVAVSER-ALEAIE 215 (383)
T ss_pred EEecc---cCCCccc----------chhh----cCccEEEecCchhccCCCc--cceeEECHH-HHHHHh
Confidence 99875 3455442 1122 2467888888999965 67 588888876 555554
No 400
>KOG1271 consensus Methyltransferases [General function prediction only]
Probab=98.99 E-value=2.4e-09 Score=105.44 Aligned_cols=136 Identities=20% Similarity=0.270 Sum_probs=93.4
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccC
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD 111 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~ 111 (903)
.+|||+|||+|.+...|++..-..+.+|+|.|+.++++|+..++.++++ +.|+|.+.|+.++...
T Consensus 69 ~~VlDLGtGNG~~L~~L~~egf~~~L~GvDYs~~AV~LA~niAe~~~~~---------------n~I~f~q~DI~~~~~~ 133 (227)
T KOG1271|consen 69 DRVLDLGTGNGHLLFQLAKEGFQSKLTGVDYSEKAVELAQNIAERDGFS---------------NEIRFQQLDITDPDFL 133 (227)
T ss_pred cceeeccCCchHHHHHHHHhcCCCCccccccCHHHHHHHHHHHHhcCCC---------------cceeEEEeeccCCccc
Confidence 3999999999999999999855557999999999999999888777763 5599999999987333
Q ss_pred CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeC
Q 043334 112 HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMG 191 (903)
Q Consensus 112 ~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~ 191 (903)
.++||+|.- ......+. |++. ...+. +...+..+.+.|+|||+|++...
T Consensus 134 -~~qfdlvlD------KGT~DAis--------------Ls~d--------~~~~r--~~~Y~d~v~~ll~~~gifvItSC 182 (227)
T KOG1271|consen 134 -SGQFDLVLD------KGTLDAIS--------------LSPD--------GPVGR--LVVYLDSVEKLLSPGGIFVITSC 182 (227)
T ss_pred -ccceeEEee------cCceeeee--------------cCCC--------Ccccc--eeeehhhHhhccCCCcEEEEEec
Confidence 347888851 11111100 0000 00000 01336667788999999988654
Q ss_pred CCCcHHHHHHHHHHCCCeEEEEE
Q 043334 192 GRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 192 ~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... ..++.+.++..||......
T Consensus 183 N~T-~dELv~~f~~~~f~~~~tv 204 (227)
T KOG1271|consen 183 NFT-KDELVEEFENFNFEYLSTV 204 (227)
T ss_pred Ccc-HHHHHHHHhcCCeEEEEee
Confidence 443 4445678888888876653
No 401
>TIGR02143 trmA_only tRNA (uracil-5-)-methyltransferase. This family consists exclusively of proteins believed to act as tRNA (uracil-5-)-methyltransferase. All members of far are proteobacterial. The seed alignment was taken directly from pfam05958 in Pfam 12.0, but higher cutoffs are used to select only functionally equivalent proteins. Homologous proteins excluded by the higher cutoff scores of this model include other uracil methyltransferases, such as RumA, active on rRNA.
Probab=98.99 E-value=6e-09 Score=117.63 Aligned_cols=139 Identities=16% Similarity=0.222 Sum_probs=99.3
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccC
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD 111 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~ 111 (903)
.+|||+|||+|.+++.+++.. .+|+|+|++++|++.|++|+..|++ ++++++++|+.++...
T Consensus 199 ~~vlDl~~G~G~~sl~la~~~--~~v~~vE~~~~av~~a~~n~~~~~~----------------~~v~~~~~d~~~~~~~ 260 (353)
T TIGR02143 199 GDLLELYCGNGNFSLALAQNF--RRVLATEIAKPSVNAAQYNIAANNI----------------DNVQIIRMSAEEFTQA 260 (353)
T ss_pred CcEEEEeccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCC----------------CcEEEEEcCHHHHHHH
Confidence 479999999999999999874 5999999999999999999999987 4799999999876432
Q ss_pred ----------C-----CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHH
Q 043334 112 ----------H-----DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEG 176 (903)
Q Consensus 112 ----------~-----~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~ 176 (903)
. ...||+|+.+||..- +.. .+++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~d~v~lDPPR~G------~~~----------------------------------~~l~~l 300 (353)
T TIGR02143 261 MNGVREFRRLKGIDLKSYNCSTIFVDPPRAG------LDP----------------------------------DTCKLV 300 (353)
T ss_pred HhhccccccccccccccCCCCEEEECCCCCC------CcH----------------------------------HHHHHH
Confidence 0 114899999999431 110 233333
Q ss_pred hhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeec
Q 043334 177 IGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEK 240 (903)
Q Consensus 177 ~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~ 240 (903)
. +|++++++.++.......+.. |. .||++.++... ..|..+..++.++.+++
T Consensus 301 ~---~~~~ivYvsC~p~tlaRDl~~-L~-~~Y~l~~v~~~-------DmFP~T~HvE~v~lL~r 352 (353)
T TIGR02143 301 Q---AYERILYISCNPETLKANLEQ-LS-ETHRVERFALF-------DQFPYTHHMECGVLLER 352 (353)
T ss_pred H---cCCcEEEEEcCHHHHHHHHHH-Hh-cCcEEEEEEEc-------ccCCCCCcEEEEEEEEe
Confidence 3 378999999887666666543 43 34888877422 23334455666665554
No 402
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.98 E-value=1e-08 Score=108.03 Aligned_cols=222 Identities=14% Similarity=0.143 Sum_probs=156.8
Q ss_pred CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHH
Q 043334 629 IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGN 708 (903)
Q Consensus 629 ~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~ 708 (903)
|..++.+++.++.. ....+|..+-...++++.++.+|.+.. +++++|++..+-.+...+-+||.+|++.+-++.-
T Consensus 34 PTdeMr~am~eA~v-gDdVyGeD~tt~rLE~~vA~l~GKEAg----LFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~ 108 (384)
T KOG1368|consen 34 PTDEMRRAMAEASV-GDDVYGEDPTTNRLEQRVAELFGKEAG----LFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIH 108 (384)
T ss_pred ChHHHHHHHhhccc-CcccccCCccHHHHHHHHHHHhCccce----eeecccccccHHHHHHHhcCCCceEEeccchhee
Confidence 45567777766532 334678877788899999999998765 9999999999988777777799999998877643
Q ss_pred HH---HHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCC-------CcEEEEECCCCCCcc-cCCCHHHHHHHHHHHH
Q 043334 709 YV---SAARFLKANIVNIPTESEVGFKMTEKTLVTILETVK-------KPWVYISGPTINPTG-LLYSNKEIENILTVCA 777 (903)
Q Consensus 709 ~~---~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~-------~~~vil~~P~~NPTG-~v~s~eel~eI~~ia~ 777 (903)
.. .+....|+.+.++... ++..+|++++++++.... .++|.+.|-+ |-+| .++|.|++.++.++|+
T Consensus 109 ~~E~gg~s~l~gv~~~tv~~e--~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~-~~~Gg~vlPle~~~~v~~lak 185 (384)
T KOG1368|consen 109 RYEQGGISQLAGVHVRTVKNE--NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTH-NNCGGKVLPLEELDRVKALAK 185 (384)
T ss_pred ehhccChhhhccceeEeeeeC--CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccc-cccCceEeeHHHHHHHHHHHh
Confidence 22 2446678888887654 344599999999987421 2478887776 6666 9999999999999999
Q ss_pred hCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC
Q 043334 778 KYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG 857 (903)
Q Consensus 778 k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~ 857 (903)
++|+.+..|-+- .|+..-.+..++......++. +--.|||.+|.| +|-++..++.++++-+.+..
T Consensus 186 ~~glkLH~DGAR---i~NAavasgV~vk~i~~~fDS---------VsiCLSKglgAP---VGSViVG~k~FI~kA~~~RK 250 (384)
T KOG1368|consen 186 RHGLKLHMDGAR---IFNAAVASGVPVKKICSAFDS---------VSICLSKGLGAP---VGSVIVGSKDFIDKARHFRK 250 (384)
T ss_pred ccCCeeecchhh---hhhHHHHcCCCHHHHHHhhhh---------hhhhhhccCCCC---cccEEEccHHHHHHHHHHHH
Confidence 999999999875 455433333333333222221 333589998765 78766666558887665432
Q ss_pred ----CCCCcHHHHHHHHHHH
Q 043334 858 ----LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 858 ----~~~~s~~~Q~aa~~~L 873 (903)
-...+...-.++..+|
T Consensus 251 alGGGmRQsGvLaaaaLval 270 (384)
T KOG1368|consen 251 ALGGGMRQSGVLAAAALVAL 270 (384)
T ss_pred HhcCchhHHHHHHHHHHHHh
Confidence 4445556666666666
No 403
>PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins. The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A.
Probab=98.98 E-value=2.8e-09 Score=107.88 Aligned_cols=126 Identities=19% Similarity=0.328 Sum_probs=85.5
Q ss_pred CCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR 110 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~ 110 (903)
-.++||+|||.|.++..||.++ .+++++|+++.+++.|++++... ++|+|.++|+.+..+
T Consensus 44 y~~alEvGCs~G~lT~~LA~rC--d~LlavDis~~Al~~Ar~Rl~~~------------------~~V~~~~~dvp~~~P 103 (201)
T PF05401_consen 44 YRRALEVGCSIGVLTERLAPRC--DRLLAVDISPRALARARERLAGL------------------PHVEWIQADVPEFWP 103 (201)
T ss_dssp EEEEEEE--TTSHHHHHHGGGE--EEEEEEES-HHHHHHHHHHTTT-------------------SSEEEEES-TTT---
T ss_pred cceeEecCCCccHHHHHHHHhh--CceEEEeCCHHHHHHHHHhcCCC------------------CCeEEEECcCCCCCC
Confidence 3689999999999999999984 69999999999999999987422 589999999988765
Q ss_pred CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEe
Q 043334 111 DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNM 190 (903)
Q Consensus 111 ~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~ 190 (903)
.. +||+||.. ++. | .-...+.+..+++.+.+.|+|||.+++-+
T Consensus 104 ~~--~FDLIV~S--------------EVl--------Y-------------YL~~~~~L~~~l~~l~~~L~pgG~LV~g~ 146 (201)
T PF05401_consen 104 EG--RFDLIVLS--------------EVL--------Y-------------YLDDAEDLRAALDRLVAALAPGGHLVFGH 146 (201)
T ss_dssp SS---EEEEEEE--------------S-G--------G-------------GSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CC--CeeEEEEe--------------hHh--------H-------------cCCCHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 43 89999831 011 1 01122345588999999999999999944
Q ss_pred C---------CCCcHHHHHHHHHHCCCeEEEE
Q 043334 191 G---------GRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 191 ~---------~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
. ...+.+.+.++|.+.=-++..+
T Consensus 147 ~rd~~c~~wgh~~ga~tv~~~~~~~~~~~~~~ 178 (201)
T PF05401_consen 147 ARDANCRRWGHAAGAETVLEMLQEHLTEVERV 178 (201)
T ss_dssp E-HHHHHHTT-S--HHHHHHHHHHHSEEEEEE
T ss_pred ecCCcccccCcccchHHHHHHHHHHhhheeEE
Confidence 3 3346667777887763333333
No 404
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.97 E-value=9.9e-08 Score=110.82 Aligned_cols=273 Identities=11% Similarity=0.103 Sum_probs=155.9
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCC--CC-CchHHHHHHHHHHHhhcCCCCCCCCcEEe-cCchHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNM--SE-SEIDVTPSIQQYIKSNFGFPIDINAEFIY-ADCSQS 683 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~--~~-G~~~lr~ala~~l~~~~G~~~~pe~~I~v-t~Gs~~ 683 (903)
...|...||+..|- ..++ .+|.+.+++.+.+.+... .. ...+.+..+++.+.+....+...+..+++ ++++++
T Consensus 35 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 114 (425)
T PRK09264 35 DEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTN 114 (425)
T ss_pred eCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHH
Confidence 35677889986653 3344 577888999887765222 11 12345666777776643222111114655 567777
Q ss_pred HHHHHHHHhcc-CC-CeEEEcCCCcHHHHHH-HHHcC------------CEEEEecCCCCCCcc-cCHHHHHHHhhcC--
Q 043334 684 LFNKLVLCCIL-EG-GTLCFPAGSNGNYVSA-ARFLK------------ANIVNIPTESEVGFK-MTEKTLVTILETV-- 745 (903)
Q Consensus 684 al~~ll~~l~~-pG-D~Vlv~~P~y~~~~~~-~~~~G------------~~vv~v~~~~~~~f~-ld~~~L~~~l~~~-- 745 (903)
+...++..... .| .+|+....+|-+.... ....| ..+..+|........ -|++.+++.+...
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 194 (425)
T PRK09264 115 AVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS 194 (425)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence 77766654421 23 4677777666554322 22211 023333332100000 1567788877532
Q ss_pred --CCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 746 --KKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 746 --~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
...+.++.-|-+.-.|. +.+.+.+++|.++|++||+++|+||++.++-..|.. +. ....+-.| |
T Consensus 195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~---~~----~~~~~v~P---D--- 261 (425)
T PRK09264 195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTF---FS----FERAGITP---D--- 261 (425)
T ss_pred CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHH---HH----HhhcCCCC---C---
Confidence 11245566666555675 578999999999999999999999999765333322 11 11111122 2
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhC-C-CCCCCcHHHHHHHHHHH-hcccccchhHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSF-P-GLSKPHSTVRYAIKKLL-GLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~-~-~~~~~s~~~Q~aa~~~L-~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
+-+|||.++..|+++|+++++++ + ..+... . .+.+.+.++..++.+.| .... .+.+.++++++.+.++++.+
T Consensus 262 -i~t~~K~l~~~G~pigav~~~~~-i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~--~~~l~~~~~~~g~~l~~~l~ 336 (425)
T PRK09264 262 -IVTLSKSISGYGLPMALVLIKPE-L-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS--DDAFEKEVKAKGELVRERLE 336 (425)
T ss_pred -EEEeccccCCCccceEEEEEchh-h-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHH
Confidence 34779999855999999999976 5 444321 1 24455555555554555 2111 12456777777777777665
Q ss_pred HH
Q 043334 900 RL 901 (903)
Q Consensus 900 ~l 901 (903)
.+
T Consensus 337 ~l 338 (425)
T PRK09264 337 EI 338 (425)
T ss_pred HH
Confidence 54
No 405
>PRK15029 arginine decarboxylase; Provisional
Probab=98.97 E-value=3.7e-08 Score=119.63 Aligned_cols=171 Identities=12% Similarity=0.122 Sum_probs=127.4
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCc--
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGF-- 731 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f-- 731 (903)
..+..+..++.||.+.+ .++++|++.++..++.+++.+||.|+++..|+-+....+...|+++++++... +.|
T Consensus 207 I~eAq~~aA~~fgA~~t----~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~-~~~Gi 281 (755)
T PRK15029 207 FGESEKYAARVFGADRS----WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR-NRYGI 281 (755)
T ss_pred HHHHHHHHHHHhCCCcE----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cccCC
Confidence 45566777788898654 99999999999999999999999999999999999999999999999997543 222
Q ss_pred --ccC-----HHHHHHHhhcCC---------CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCC-Ccc
Q 043334 732 --KMT-----EKTLVTILETVK---------KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSG-LEF 794 (903)
Q Consensus 732 --~ld-----~~~L~~~l~~~~---------~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~-l~f 794 (903)
.++ ++.+++++.... +.++++++|+ --|.++. +++|+++|+++++.|++||+|+. +.|
T Consensus 282 ~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT--Y~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F 356 (755)
T PRK15029 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT--YDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_pred ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC--CcceeeC---HHHHHHHHHhcCCeEEEECcccccccc
Confidence 234 888988885431 1289999996 7899988 88899999999999999999954 445
Q ss_pred CCCCCCCCchhhhhh--hhccCCCCCCceEEEccCchhcccccceee-EEEe
Q 043334 795 NYEGWGGWDLEGCLS--KLYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVL 843 (903)
Q Consensus 795 ~~~~~s~~s~~~~~~--~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~ 843 (903)
.+.. +..+.+. ...... -.++++.|.-|++ |++.-| ++..
T Consensus 357 ~~~~----p~~sa~~~~~~~~~G---ad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 357 NPIY----ADHYAMRGEPGDHNG---PTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred Cccc----cccccccccccccCC---CceEEEEchhhcc--cchhhhhhhee
Confidence 4321 1001110 001010 1259999999997 577766 5554
No 406
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.96 E-value=1e-07 Score=109.53 Aligned_cols=260 Identities=8% Similarity=0.023 Sum_probs=156.7
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCC--CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNM--SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~--~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..| ...++ ..|.+.+++.+.+.+... .....++...+++++.+..+ .+ .++++++++++..
T Consensus 33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~---~v~f~~SGseA~e 107 (395)
T PRK03715 33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHSC--FD---KVFFANSGAEANE 107 (395)
T ss_pred CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhccC--CC---EEEEeCCcHHHHH
Confidence 467789999754 33344 368888888887765321 12235566778888776432 22 7999999999888
Q ss_pred HHHHHhcc------CC-CeEEEcCCCcHHH-HHHHHHcCCEEEE---ecCCCCCCcc----cCHHHHHHHhhcCCCcEEE
Q 043334 687 KLVLCCIL------EG-GTLCFPAGSNGNY-VSAARFLKANIVN---IPTESEVGFK----MTEKTLVTILETVKKPWVY 751 (903)
Q Consensus 687 ~ll~~l~~------pG-D~Vlv~~P~y~~~-~~~~~~~G~~vv~---v~~~~~~~f~----ld~~~L~~~l~~~~~~~vi 751 (903)
.++..... +| ..|+..+.+|-.. .......|..... .|.. .+|. .|++.+++.+.++. ..+
T Consensus 108 ~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~--aav 183 (395)
T PRK03715 108 GAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQV--PGFPKAELNDIASVEKLITDKT--VAV 183 (395)
T ss_pred HHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCC--CCceeeCCchHHHHHHHcCCCc--eEE
Confidence 88877641 23 4677777766543 3334444432111 1111 1121 47889998886543 344
Q ss_pred EECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchh
Q 043334 752 ISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLK 830 (903)
Q Consensus 752 l~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~ 830 (903)
+..|-++..|... +.+.+++|.++|++||+++|.||++.++--.|.. +. ...++-.| . +.+|||.
T Consensus 184 i~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~---~a----~~~~gv~P-----D--i~t~gK~ 249 (395)
T PRK03715 184 MLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTL---FA----YELSGIEP-----D--IMTLGKG 249 (395)
T ss_pred EEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcch---hh----HhhcCCCC-----c--eeeehhh
Confidence 5556646666654 6899999999999999999999999864222221 10 11122122 1 3578999
Q ss_pred cccccceeeEEEeCcHHHHHHHH-hC-CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 831 MLTGALKFGFLVLNHPQLVDAFS-SF-PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 831 ~g~~GlRiG~lv~~~~~li~~l~-~~-~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
+| .|+.+|.+++.++ +.. +. .. ..+++.++..-.++.+.|+.-.. +.+.+.+.++-+.++++.+
T Consensus 250 lg-~G~p~~av~~~~~-i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~ 315 (395)
T PRK03715 250 IG-GGVPLAALLAKAE-VAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLA--PGFLEGVRARGEYLKEKLL 315 (395)
T ss_pred hh-CCcceEEEEEccc-ccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 98 5799999999877 642 22 11 12445667777777777642211 2234455555555555544
No 407
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=98.96 E-value=3.5e-09 Score=120.63 Aligned_cols=102 Identities=23% Similarity=0.265 Sum_probs=79.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+++++.|+++.. ++ ++++..+|..+.
T Consensus 166 ~~g~rVLDIGcG~G~~a~~la~~~-g~~V~giDlS~~~l~~A~~~~~--~l-----------------~v~~~~~D~~~l 225 (383)
T PRK11705 166 KPGMRVLDIGCGWGGLARYAAEHY-GVSVVGVTISAEQQKLAQERCA--GL-----------------PVEIRLQDYRDL 225 (383)
T ss_pred CCCCEEEEeCCCccHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhc--cC-----------------eEEEEECchhhc
Confidence 467899999999999999998865 6799999999999999998873 22 478888888765
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ++||.|+++..+... |...+..+++++.++|||||.+++
T Consensus 226 --~--~~fD~Ivs~~~~ehv------------------------------------g~~~~~~~l~~i~r~LkpGG~lvl 265 (383)
T PRK11705 226 --N--GQFDRIVSVGMFEHV------------------------------------GPKNYRTYFEVVRRCLKPDGLFLL 265 (383)
T ss_pred --C--CCCCEEEEeCchhhC------------------------------------ChHHHHHHHHHHHHHcCCCcEEEE
Confidence 2 389999975322111 112234789999999999999998
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 266 ~~ 267 (383)
T PRK11705 266 HT 267 (383)
T ss_pred EE
Confidence 64
No 408
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=98.96 E-value=3.6e-09 Score=111.38 Aligned_cols=141 Identities=14% Similarity=0.159 Sum_probs=89.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhh-hcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAE-KKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~-~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||.|..++.||++ |.+|+|+|+|+.+++.+.. .+++.... ..... ......++++.++|+.++
T Consensus 37 ~~~rvL~~gCG~G~da~~LA~~--G~~V~avD~s~~Ai~~~~~---~~~l~~~~--~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 37 AGSRVLVPLCGKSLDMLWLAEQ--GHEVLGVELSELAVEQFFA---ENGLTPQT--RQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred CCCeEEEeCCCChHhHHHHHhC--CCeEEEEccCHHHHHHHHH---HcCCCccc--cccccccccccCceEEEECcccCC
Confidence 4679999999999999999987 8999999999999998742 23321000 00000 011235799999999998
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....+.||.|+-.- ....++ .+.-.++++.+.+.|+|||++++
T Consensus 110 ~~~~~~~fd~v~D~~------~~~~l~------------------------------~~~R~~~~~~l~~lL~pgG~~~l 153 (218)
T PRK13255 110 TAADLADVDAVYDRA------ALIALP------------------------------EEMRERYVQQLAALLPAGCRGLL 153 (218)
T ss_pred CcccCCCeeEEEehH------hHhhCC------------------------------HHHHHHHHHHHHHHcCCCCeEEE
Confidence 654434899997211 011111 12234789999999999997544
Q ss_pred Ee---C-----C---CCcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NM---G-----G---RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~---~-----~---~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.. . . ....+.+++++. .+|.+....
T Consensus 154 ~~~~~~~~~~~gPp~~~~~~el~~~~~-~~~~i~~~~ 189 (218)
T PRK13255 154 VTLDYPQEELAGPPFSVSDEEVEALYA-GCFEIELLE 189 (218)
T ss_pred EEEEeCCccCCCCCCCCCHHHHHHHhc-CCceEEEee
Confidence 11 1 1 124555555663 236666553
No 409
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.95 E-value=5.8e-08 Score=113.63 Aligned_cols=207 Identities=8% Similarity=0.046 Sum_probs=135.2
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHc-cC--C-----CCCch--HHHH-HHHHHHHhhcCCCCCCCCcEEec---C
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFAR-QN--M-----SESEI--DVTP-SIQQYIKSNFGFPIDINAEFIYA---D 679 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~-y~--~-----~~G~~--~lr~-ala~~l~~~~G~~~~pe~~I~vt---~ 679 (903)
..+.|+|-.++|. +++.+++++...+.. |. . ..|.. +..+ ..++.+++.+|.+.+ ++.++ +
T Consensus 33 ~~~~l~l~~sen~--~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~---~~~~~~~~~ 107 (452)
T PTZ00094 33 QIEGLELIASENF--TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPE---EWGVNVQPY 107 (452)
T ss_pred HHcCeeEeccccc--CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcc---cceeecCCC
Confidence 3568999888886 467788888887753 31 1 11221 1112 244577788887644 56555 6
Q ss_pred chHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHH----------cCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcE
Q 043334 680 CSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARF----------LKANIVNIPTESEVGFKMTEKTLVTILETVKKPW 749 (903)
Q Consensus 680 Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~----------~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~ 749 (903)
|++++...++.+++++||+|++....++.+...... .+.+++.++++.+ ..+|++++++.++..++++
T Consensus 108 sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~--g~id~~~L~~~l~~~~~~l 185 (452)
T PTZ00094 108 SGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK--GLIDYDKLEELAKAFRPKL 185 (452)
T ss_pred chHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCC--CCcCHHHHHHHHHHhCCCE
Confidence 777888888999999999999988777665543321 1234455666542 5689999999996533345
Q ss_pred EEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 750 VYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 750 vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
+++. + +.+|...+ +++|.++|+++|+++++|.+++.-....... . ..+. +..++..|..|
T Consensus 186 vi~~--~-s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~---~-----~~~~------~~D~l~~S~hK 245 (452)
T PTZ00094 186 IIAG--A-SAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVL---P-----SPFP------YADVVTTTTHK 245 (452)
T ss_pred EEEe--C-CCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCC---C-----CCCC------CCcEEEcCCcc
Confidence 5543 3 45898888 7777788999999999999986433322110 0 0011 24689999999
Q ss_pred hcccccceeeEEEeCcHHHHH
Q 043334 830 KMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 830 ~~g~~GlRiG~lv~~~~~li~ 850 (903)
+++ |-+.|++.+.+. +.+
T Consensus 246 ~l~--GP~Gg~l~~~~~-~~~ 263 (452)
T PTZ00094 246 SLR--GPRSGLIFYRKK-VKP 263 (452)
T ss_pred CCC--CCCceEEEEecc-cch
Confidence 874 334588888664 444
No 410
>PRK02769 histidine decarboxylase; Provisional
Probab=98.95 E-value=1.2e-07 Score=108.22 Aligned_cols=180 Identities=15% Similarity=0.144 Sum_probs=133.3
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh--ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC--ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTES 727 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l--~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~ 727 (903)
..++.+.+.+++++.+|.+.. +..-++|+|++++....+... ..+++.|++++-.+.....+++..|.+.+.++.++
T Consensus 63 ~~~~e~~~~~~~a~l~g~~~~-~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~ 141 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIPFN-ESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP 141 (380)
T ss_pred hHHHHHHHHHHHHHHhCCCCC-CCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCC
Confidence 345667888999999998643 112388999999876554333 25788999999999999999999999999999864
Q ss_pred CCCcccCHHHHHHHhhcC---CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCC---cEEEEecCCCCCcc--CCCCC
Q 043334 728 EVGFKMTEKTLVTILETV---KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYG---ARVVIDTAFSGLEF--NYEGW 799 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~---~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~---i~VI~DeaY~~l~f--~~~~~ 799 (903)
++.+|+++|++.+++. + .+|+++.++ |+||.+-+ +++|.++|+++| +++.+|-+|+.... .....
T Consensus 142 --~g~id~~~L~~~i~~~~~~t-~lvv~t~gt-t~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~ 214 (380)
T PRK02769 142 --NGEIDYDDLISKIKENKNQP-PIIFANIGT-TMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP 214 (380)
T ss_pred --CCcCcHHHHHHHHHhCCCCc-EEEEEEeCC-CCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCccc
Confidence 4679999999999875 4 488889998 99999988 788888999998 69999999976322 11110
Q ss_pred CCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 800 GGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 800 s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
.+.. .. +-..+..|..|.++. -.-+|+++..++ ..+.+
T Consensus 215 -------~~d~-~~-----~vDsis~s~HK~~~~-P~g~G~l~~r~~-~~~~~ 252 (380)
T PRK02769 215 -------PFSF-AD-----GIDSIAISGHKFIGS-PMPCGIVLAKKK-YVERI 252 (380)
T ss_pred -------cCCc-cC-----CCCEEEECCcccCCC-CCCcEEEEEehh-hhhhc
Confidence 0110 00 235677889997763 345899998876 66554
No 411
>PF05971 Methyltransf_10: Protein of unknown function (DUF890); InterPro: IPR010286 This family consists of several conserved hypothetical proteins from both eukaryotes and prokaryotes. The function of members of this family are unknown but are predicted to be SAM-dependent methyltransferases.; GO: 0008168 methyltransferase activity; PDB: 2H00_A.
Probab=98.94 E-value=2.1e-08 Score=108.85 Aligned_cols=186 Identities=12% Similarity=0.127 Sum_probs=91.7
Q ss_pred cCCcccCc-----chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-
Q 043334 4 IPSIFIPE-----DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN- 77 (903)
Q Consensus 4 ~p~vfiP~-----~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~- 77 (903)
+++-+.|. +|..-+.+.|....+......++||||||...+--.|+.+..+++++|+|||+.+++.|++|+..|
T Consensus 71 P~~~LcP~iP~R~nYi~~i~DlL~~~~~~~~~~v~glDIGTGAscIYpLLg~~~~~W~fvaTdID~~sl~~A~~nv~~N~ 150 (299)
T PF05971_consen 71 PEGRLCPPIPNRLNYIHWIADLLASSNPGIPEKVRGLDIGTGASCIYPLLGAKLYGWSFVATDIDPKSLESARENVERNP 150 (299)
T ss_dssp -TTS----HHHHHHHHHHHHHHHT--TCGCS---EEEEES-TTTTHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHHT-
T ss_pred CCCCcCCCCchhHHHHHHHHHHhhccccccccceEeecCCccHHHHHHHHhhhhcCCeEEEecCCHHHHHHHHHHHHhcc
Confidence 45555664 333222233333333233467899999999876544444445899999999999999999999999
Q ss_pred ccccCCCCcchhhhcccCCcEEEEEcc----ccccccCCCCceeEEEECCCCCCCCCccchhhHHhh----------hhh
Q 043334 78 ALDEKGQPIYDAEKKTLLDRVEFHESD----LLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITE----------NAS 143 (903)
Q Consensus 78 gl~~~~~~~~~~~~~~~~~~v~~~~gD----l~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~----------~~~ 143 (903)
++ .++|+++... ++.........||+.+|||||+...+.......... ..+
T Consensus 151 ~L---------------~~~I~l~~~~~~~~i~~~i~~~~e~~dftmCNPPFy~s~~e~~~~~~~k~~nl~~~~~~~~~p 215 (299)
T PF05971_consen 151 NL---------------ESRIELRKQKNPDNIFDGIIQPNERFDFTMCNPPFYSSQEEAEAGTERKWKNLGRPNKKRSPP 215 (299)
T ss_dssp T----------------TTTEEEEE--ST-SSTTTSTT--S-EEEEEE-----SS-------------------------
T ss_pred cc---------------ccceEEEEcCCccccchhhhcccceeeEEecCCccccChhhhcccccccccccccccccccCc
Confidence 77 3688888663 333222223489999999999976542111000000 000
Q ss_pred hhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE--EeCCCCcHHHHHHHHHHCCCeEE
Q 043334 144 EEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF--NMGGRPGQGVCKRLFERRGFRVD 211 (903)
Q Consensus 144 ~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~--~~~~~~~~~~l~~ll~~~gf~~~ 211 (903)
......-. ...+...+...++.+++++...+= .-+.++ .++.......+.+.|++.|-..+
T Consensus 216 ~~~~~G~~-----~El~~~GGEv~FV~rMI~ES~~~~--~~v~WfTsmvgKkssL~~l~~~L~~~~~~~~ 278 (299)
T PF05971_consen 216 KLNFTGQS-----NELWCEGGEVAFVKRMIKESLQLK--DQVRWFTSMVGKKSSLKPLKKELKKLGATNY 278 (299)
T ss_dssp -------T-----TTTHHHHTHHHHHHHHHHHHHHHG--GGEEEEEEEESSGGGHHHHHHHHHHTT-SEE
T ss_pred cccCCCCc-----ceEEcCCccHHHHHHHHHHHHHhC--CCcEEEeecccCcccHHHHHHHHHhcCCceE
Confidence 00000000 111112235788999999998653 334444 56777777788889999885443
No 412
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.94 E-value=6.5e-09 Score=106.66 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=65.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||||||||+.+..+|+.. .+|+.+|+.++..+.|++|+...|+ .|+.+.++|...-.
T Consensus 72 ~g~~VLEIGtGsGY~aAvla~l~--~~V~siEr~~~L~~~A~~~L~~lg~----------------~nV~v~~gDG~~G~ 133 (209)
T COG2518 72 PGDRVLEIGTGSGYQAAVLARLV--GRVVSIERIEELAEQARRNLETLGY----------------ENVTVRHGDGSKGW 133 (209)
T ss_pred CCCeEEEECCCchHHHHHHHHHh--CeEEEEEEcHHHHHHHHHHHHHcCC----------------CceEEEECCcccCC
Confidence 67999999999999999999985 4999999999999999999999988 47999999998876
Q ss_pred cCCCCceeEEE
Q 043334 110 RDHDIQLERIV 120 (903)
Q Consensus 110 ~~~~~~fD~Iv 120 (903)
.... +||.|+
T Consensus 134 ~~~a-PyD~I~ 143 (209)
T COG2518 134 PEEA-PYDRII 143 (209)
T ss_pred CCCC-CcCEEE
Confidence 5544 899997
No 413
>PLN03032 serine decarboxylase; Provisional
Probab=98.94 E-value=9.3e-08 Score=108.53 Aligned_cols=181 Identities=17% Similarity=0.153 Sum_probs=133.3
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcE--EecCchHHHHHHHHHHhc--cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEF--IYADCSQSLFNKLVLCCI--LEGGTLCFPAGSNGNYVSAARFLKANIVNIPT 725 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I--~vt~Gs~~al~~ll~~l~--~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~ 725 (903)
..++.+.+.+++++.+|.+.+ ++ ++|+|++++....+.+.. .+++.|+++.-.+.+...+++.+|.++..+|+
T Consensus 64 a~~~e~~v~~~ia~llg~~~~---~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~ 140 (374)
T PLN03032 64 SRQFEVGVLDWFARLWELEKD---EYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPT 140 (374)
T ss_pred HHHHHHHHHHHHHHHhCCCCc---cCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeee
Confidence 356778899999999998654 55 889999999887766543 24568999999999999999999999999998
Q ss_pred CCCCCcccCHHHHHHHhhcCC--CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCC-----cEEEEecCCCCC--ccCC
Q 043334 726 ESEVGFKMTEKTLVTILETVK--KPWVYISGPTINPTGLLYSNKEIENILTVCAKYG-----ARVVIDTAFSGL--EFNY 796 (903)
Q Consensus 726 ~~~~~f~ld~~~L~~~l~~~~--~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~-----i~VI~DeaY~~l--~f~~ 796 (903)
+. ++.+|+++|++++++.+ +.+|+++..+ |+||.+-+ +++|.++|+++| +++.+|-+|+.. .|..
T Consensus 141 d~--~g~id~~~L~~~i~~~~~~~~lvv~tagt-t~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~ 214 (374)
T PLN03032 141 LP--SGEIDYDDLERALAKNRDKPAILNVNIGT-TVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVS 214 (374)
T ss_pred CC--CCcCcHHHHHHHHHHcCCCCEEEEEEecC-cCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccC
Confidence 64 45799999999998642 2367777787 99999977 788888899986 589999999653 2222
Q ss_pred CCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHh
Q 043334 797 EGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 797 ~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~ 854 (903)
... .+. +.. .-..+.-|..|..+ .-.-+|.++..++ .++.+..
T Consensus 215 ~~~-------~~~-~~~-----~vDSis~s~HK~~g-~P~g~G~ll~r~~-~~~~~~~ 257 (374)
T PLN03032 215 RAP-------EVT-FRK-----PIGSVSVSGHKFLG-CPMPCGVALTRKK-HVKALSQ 257 (374)
T ss_pred CCc-------ccC-CCc-----CCcEEEECcccccC-CCcCeEEEEEEch-hhHhhcc
Confidence 110 011 000 13456778899776 2345789999876 6666543
No 414
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=98.94 E-value=7.3e-09 Score=114.86 Aligned_cols=75 Identities=17% Similarity=0.154 Sum_probs=64.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|.++..+++..+. .+|+|+|+++++++.|++|+..+++ +++.++++|..+.
T Consensus 80 ~g~~VLDIG~GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~----------------~nV~~i~gD~~~~ 143 (322)
T PRK13943 80 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGI----------------ENVIFVCGDGYYG 143 (322)
T ss_pred CCCEEEEEeCCccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC----------------CcEEEEeCChhhc
Confidence 5789999999999999999988653 4799999999999999999988876 4799999998776
Q ss_pred ccCCCCceeEEEE
Q 043334 109 CRDHDIQLERIVG 121 (903)
Q Consensus 109 ~~~~~~~fD~Iv~ 121 (903)
.... .+||+|++
T Consensus 144 ~~~~-~~fD~Ii~ 155 (322)
T PRK13943 144 VPEF-APYDVIFV 155 (322)
T ss_pred cccc-CCccEEEE
Confidence 5443 37999985
No 415
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=98.93 E-value=7.4e-09 Score=107.77 Aligned_cols=117 Identities=18% Similarity=0.252 Sum_probs=93.9
Q ss_pred hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhh
Q 043334 13 WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEK 91 (903)
Q Consensus 13 w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~ 91 (903)
-.-.|+..|.+.. ..++|||+|++.|+-++.+|...| +.+++.+|+++++.+.|++|++..|++
T Consensus 46 e~g~~L~~L~~~~----~~k~iLEiGT~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~----------- 110 (219)
T COG4122 46 ETGALLRLLARLS----GPKRILEIGTAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVD----------- 110 (219)
T ss_pred hHHHHHHHHHHhc----CCceEEEeecccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCc-----------
Confidence 4445556655554 478999999999999999999998 779999999999999999999999984
Q ss_pred cccCCcEEEEE-ccccccccC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHH
Q 043334 92 KTLLDRVEFHE-SDLLAYCRD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLI 169 (903)
Q Consensus 92 ~~~~~~v~~~~-gDl~~~~~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~ 169 (903)
++++.+. +|..+.... ..++||+|+ +..+. ..|
T Consensus 111 ----~~i~~~~~gdal~~l~~~~~~~fDliF-----IDadK------------------------------------~~y 145 (219)
T COG4122 111 ----DRIELLLGGDALDVLSRLLDGSFDLVF-----IDADK------------------------------------ADY 145 (219)
T ss_pred ----ceEEEEecCcHHHHHHhccCCCccEEE-----EeCCh------------------------------------hhC
Confidence 6789998 598887654 345999998 22211 124
Q ss_pred HHHHHHHhhcccCCcEEEEE
Q 043334 170 ARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 170 ~~~l~~~~~~LkpgG~ll~~ 189 (903)
..+++.+.+.|+|||.++++
T Consensus 146 p~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 146 PEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred HHHHHHHHHHhCCCcEEEEe
Confidence 47899999999999999983
No 416
>PLN02585 magnesium protoporphyrin IX methyltransferase
Probab=98.93 E-value=2e-08 Score=111.10 Aligned_cols=76 Identities=18% Similarity=0.173 Sum_probs=60.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.|++.|++|....+.. .....++.|.++|+.++
T Consensus 144 ~~~~VLDlGcGtG~~a~~la~~--g~~V~gvD~S~~ml~~A~~~~~~~~~~-----------~~~~~~~~f~~~Dl~~l- 209 (315)
T PLN02585 144 AGVTVCDAGCGTGSLAIPLALE--GAIVSASDISAAMVAEAERRAKEALAA-----------LPPEVLPKFEANDLESL- 209 (315)
T ss_pred CCCEEEEecCCCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcccc-----------cccccceEEEEcchhhc-
Confidence 5789999999999999999986 689999999999999999998654210 00013688999998654
Q ss_pred cCCCCceeEEEEC
Q 043334 110 RDHDIQLERIVGC 122 (903)
Q Consensus 110 ~~~~~~fD~Iv~N 122 (903)
. ++||+|+++
T Consensus 210 -~--~~fD~Vv~~ 219 (315)
T PLN02585 210 -S--GKYDTVTCL 219 (315)
T ss_pred -C--CCcCEEEEc
Confidence 2 389999875
No 417
>PLN02476 O-methyltransferase
Probab=98.93 E-value=8e-09 Score=111.65 Aligned_cols=104 Identities=9% Similarity=0.121 Sum_probs=84.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
+.++|||+|||+|+.++.+|...+ +.+|+++|.++++.+.|++|++..|+ .++++++.||..+.
T Consensus 118 ~ak~VLEIGT~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl---------------~~~I~li~GdA~e~ 182 (278)
T PLN02476 118 GAERCIEVGVYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGV---------------SHKVNVKHGLAAES 182 (278)
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCcEEEEEcCHHHH
Confidence 468999999999999999998765 45899999999999999999999988 36899999999876
Q ss_pred ccCC-----CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 109 CRDH-----DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 109 ~~~~-----~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
.... .++||+|+- ..+. ..|...++.+.+.|+||
T Consensus 183 L~~l~~~~~~~~FD~VFI-----Da~K------------------------------------~~Y~~y~e~~l~lL~~G 221 (278)
T PLN02476 183 LKSMIQNGEGSSYDFAFV-----DADK------------------------------------RMYQDYFELLLQLVRVG 221 (278)
T ss_pred HHHHHhcccCCCCCEEEE-----CCCH------------------------------------HHHHHHHHHHHHhcCCC
Confidence 4321 248999982 1111 12447789999999999
Q ss_pred cEEEEE
Q 043334 184 GIMIFN 189 (903)
Q Consensus 184 G~ll~~ 189 (903)
|.++++
T Consensus 222 GvIV~D 227 (278)
T PLN02476 222 GVIVMD 227 (278)
T ss_pred cEEEEe
Confidence 999984
No 418
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Probab=98.92 E-value=1e-08 Score=92.32 Aligned_cols=103 Identities=27% Similarity=0.406 Sum_probs=80.5
Q ss_pred eEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCC
Q 043334 33 TVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDH 112 (903)
Q Consensus 33 ~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~ 112 (903)
+++|+|||+|..+..+++ .+..+++++|+++.+++.++++....+ ..++.++.+|..+.....
T Consensus 1 ~ildig~G~G~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 63 (107)
T cd02440 1 RVLDLGCGTGALALALAS-GPGARVTGVDISPVALELARKAAAALL----------------ADNVEVLKGDAEELPPEA 63 (107)
T ss_pred CeEEEcCCccHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHhccc----------------ccceEEEEcChhhhcccc
Confidence 589999999999999887 557899999999999999986443332 257999999998876422
Q ss_pred CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 113 DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 113 ~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.++||+|++|+++... . .....+++.+.+.|+|||.+++.
T Consensus 64 ~~~~d~i~~~~~~~~~------~-------------------------------~~~~~~l~~~~~~l~~~g~~~~~ 103 (107)
T cd02440 64 DESFDVIISDPPLHHL------V-------------------------------EDLARFLEEARRLLKPGGVLVLT 103 (107)
T ss_pred CCceEEEEEccceeeh------h-------------------------------hHHHHHHHHHHHHcCCCCEEEEE
Confidence 3489999998877632 0 11237789999999999999875
No 419
>PTZ00146 fibrillarin; Provisional
Probab=98.92 E-value=1.7e-08 Score=109.32 Aligned_cols=129 Identities=15% Similarity=0.088 Sum_probs=87.3
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
+.++.+|||+|||+|.++..+++..+ ..+|+++|++++|.+.....+... .++.++.+|+.
T Consensus 130 IkpG~~VLDLGaG~G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r------------------~NI~~I~~Da~ 191 (293)
T PTZ00146 130 IKPGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKR------------------PNIVPIIEDAR 191 (293)
T ss_pred cCCCCEEEEeCCcCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc------------------CCCEEEECCcc
Confidence 45788999999999999999999874 358999999997664433322111 36888999986
Q ss_pred ccc--cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc
Q 043334 107 AYC--RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG 184 (903)
Q Consensus 107 ~~~--~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG 184 (903)
... .....+||+|+++... ++ ..+.++.++.++|||||
T Consensus 192 ~p~~y~~~~~~vDvV~~Dva~---pd-------------------------------------q~~il~~na~r~LKpGG 231 (293)
T PTZ00146 192 YPQKYRMLVPMVDVIFADVAQ---PD-------------------------------------QARIVALNAQYFLKNGG 231 (293)
T ss_pred ChhhhhcccCCCCEEEEeCCC---cc-------------------------------------hHHHHHHHHHHhccCCC
Confidence 532 0011279999865311 00 01245667899999999
Q ss_pred EEEEEeC-----CCCcHHHH----HHHHHHCCCeEEEEE
Q 043334 185 IMIFNMG-----GRPGQGVC----KRLFERRGFRVDKLW 214 (903)
Q Consensus 185 ~ll~~~~-----~~~~~~~l----~~ll~~~gf~~~~~~ 214 (903)
.|++... .....+.+ .+++++.||+..+..
T Consensus 232 ~~vI~ika~~id~g~~pe~~f~~ev~~L~~~GF~~~e~v 270 (293)
T PTZ00146 232 HFIISIKANCIDSTAKPEVVFASEVQKLKKEGLKPKEQL 270 (293)
T ss_pred EEEEEEeccccccCCCHHHHHHHHHHHHHHcCCceEEEE
Confidence 9999433 22223322 367899999988764
No 420
>KOG3420 consensus Predicted RNA methylase [Translation, ribosomal structure and biogenesis]
Probab=98.92 E-value=2.4e-09 Score=101.53 Aligned_cols=83 Identities=24% Similarity=0.329 Sum_probs=71.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.+|++++|+|||+|.++++.+ ..++..|+|+||+|++++++++|+....+ +++++++|+.++
T Consensus 47 iEgkkl~DLgcgcGmLs~a~s-m~~~e~vlGfDIdpeALEIf~rNaeEfEv-----------------qidlLqcdildl 108 (185)
T KOG3420|consen 47 IEGKKLKDLGCGCGMLSIAFS-MPKNESVLGFDIDPEALEIFTRNAEEFEV-----------------QIDLLQCDILDL 108 (185)
T ss_pred ccCcchhhhcCchhhhHHHhh-cCCCceEEeeecCHHHHHHHhhchHHhhh-----------------hhheeeeeccch
Confidence 689999999999999997644 45567899999999999999999976655 679999999998
Q ss_pred ccCCCCceeEEEECCCCCCCCC
Q 043334 109 CRDHDIQLERIVGCIPQILNPN 130 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~ 130 (903)
.... +.||.++.||||-....
T Consensus 109 e~~~-g~fDtaviNppFGTk~~ 129 (185)
T KOG3420|consen 109 ELKG-GIFDTAVINPPFGTKKK 129 (185)
T ss_pred hccC-CeEeeEEecCCCCcccc
Confidence 8766 59999999999986543
No 421
>PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification
Probab=98.91 E-value=1.6e-08 Score=108.75 Aligned_cols=155 Identities=17% Similarity=0.222 Sum_probs=98.4
Q ss_pred CcccCcchhHHH-HHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCC
Q 043334 6 SIFIPEDWSFTF-YEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQ 84 (903)
Q Consensus 6 ~vfiP~~w~~~~-~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~ 84 (903)
||+|-.+|-..+ ++.+..+-. .++|++|||||||+|+.+..++.. ++..|+|+|.++......+.--...|.
T Consensus 91 gi~IDtEWrSd~KW~rl~p~l~-~L~gk~VLDIGC~nGY~~frM~~~-GA~~ViGiDP~~lf~~QF~~i~~~lg~----- 163 (315)
T PF08003_consen 91 GIHIDTEWRSDWKWDRLLPHLP-DLKGKRVLDIGCNNGYYSFRMLGR-GAKSVIGIDPSPLFYLQFEAIKHFLGQ----- 163 (315)
T ss_pred CEeecccccccchHHHHHhhhC-CcCCCEEEEecCCCcHHHHHHhhc-CCCEEEEECCChHHHHHHHHHHHHhCC-----
Confidence 677776665322 233343332 378999999999999999998887 456899999998766554322111221
Q ss_pred CcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccc
Q 043334 85 PIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQF 164 (903)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~ 164 (903)
..++..+..-+.+++. .+.||+|+| |.-.-|...|
T Consensus 164 ----------~~~~~~lplgvE~Lp~--~~~FDtVF~------------MGVLYHrr~P--------------------- 198 (315)
T PF08003_consen 164 ----------DPPVFELPLGVEDLPN--LGAFDTVFS------------MGVLYHRRSP--------------------- 198 (315)
T ss_pred ----------CccEEEcCcchhhccc--cCCcCEEEE------------eeehhccCCH---------------------
Confidence 0123333234444443 348999985 1111111111
Q ss_pred cHHHHHHHHHHHhhcccCCcEEEEEeC-----------------------CCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 165 GLGLIARAVEEGIGVIKPSGIMIFNMG-----------------------GRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 165 g~~~~~~~l~~~~~~LkpgG~ll~~~~-----------------------~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
-..++++.+.|+|||.+++++- ..+....++.++++.||+.+++....
T Consensus 199 -----l~~L~~Lk~~L~~gGeLvLETlvi~g~~~~~L~P~~rYa~m~nv~FiPs~~~L~~wl~r~gF~~v~~v~~~ 269 (315)
T PF08003_consen 199 -----LDHLKQLKDSLRPGGELVLETLVIDGDENTVLVPEDRYAKMRNVWFIPSVAALKNWLERAGFKDVRCVDVS 269 (315)
T ss_pred -----HHHHHHHHHhhCCCCEEEEEEeeecCCCceEEccCCcccCCCceEEeCCHHHHHHHHHHcCCceEEEecCc
Confidence 1568899999999999998322 11256677899999999999885443
No 422
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=98.91 E-value=5.7e-09 Score=109.70 Aligned_cols=154 Identities=19% Similarity=0.275 Sum_probs=98.6
Q ss_pred hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cccccCCCCcchhhh
Q 043334 13 WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYL-NALDEKGQPIYDAEK 91 (903)
Q Consensus 13 w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~-~gl~~~~~~~~~~~~ 91 (903)
+...+++.+.. .++.+||..|||.|.....||++ |.+|+|+|+|+.+|+.+.+.... ...... ... .
T Consensus 25 ~L~~~~~~l~~-----~~~~rvLvPgCG~g~D~~~La~~--G~~VvGvDls~~Ai~~~~~e~~~~~~~~~~----~~~-~ 92 (218)
T PF05724_consen 25 ALVEYLDSLAL-----KPGGRVLVPGCGKGYDMLWLAEQ--GHDVVGVDLSPTAIEQAFEENNLEPTVTSV----GGF-K 92 (218)
T ss_dssp HHHHHHHHHTT-----STSEEEEETTTTTSCHHHHHHHT--TEEEEEEES-HHHHHHHHHHCTTEEECTTC----TTE-E
T ss_pred HHHHHHHhcCC-----CCCCeEEEeCCCChHHHHHHHHC--CCeEEEEecCHHHHHHHHHHhccCCCcccc----cce-e
Confidence 44555555322 24679999999999999999998 78999999999999998432211 111000 000 0
Q ss_pred cccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHH
Q 043334 92 KTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIAR 171 (903)
Q Consensus 92 ~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~ 171 (903)
.....+|+++++|++++.....++||+|+ .......++...+ .+
T Consensus 93 ~~~~~~i~~~~gDfF~l~~~~~g~fD~iy------Dr~~l~Alpp~~R------------------------------~~ 136 (218)
T PF05724_consen 93 RYQAGRITIYCGDFFELPPEDVGKFDLIY------DRTFLCALPPEMR------------------------------ER 136 (218)
T ss_dssp EETTSSEEEEES-TTTGGGSCHHSEEEEE------ECSSTTTS-GGGH------------------------------HH
T ss_pred eecCCceEEEEcccccCChhhcCCceEEE------EecccccCCHHHH------------------------------HH
Confidence 11245799999999998766656899997 2233333433333 27
Q ss_pred HHHHHhhcccCCcEEEEEe--------CC---CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 172 AVEEGIGVIKPSGIMIFNM--------GG---RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 172 ~l~~~~~~LkpgG~ll~~~--------~~---~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
..+.+.++|+|||.+++.. .+ ....+.+++++. .+|++.....
T Consensus 137 Ya~~l~~ll~p~g~~lLi~l~~~~~~~~GPPf~v~~~ev~~l~~-~~f~i~~l~~ 190 (218)
T PF05724_consen 137 YAQQLASLLKPGGRGLLITLEYPQGEMEGPPFSVTEEEVRELFG-PGFEIEELEE 190 (218)
T ss_dssp HHHHHHHCEEEEEEEEEEEEES-CSCSSSSS----HHHHHHHHT-TTEEEEEEEE
T ss_pred HHHHHHHHhCCCCcEEEEEEEcCCcCCCCcCCCCCHHHHHHHhc-CCcEEEEEec
Confidence 7999999999999944411 11 124556677777 6788877743
No 423
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.91 E-value=9.8e-09 Score=111.47 Aligned_cols=158 Identities=12% Similarity=0.107 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHH----HHHHHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNY----VSAARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~----~~~~~~~G~~vv~v~~~~ 727 (903)
+-...+++.++..-|--. -+.++.+++++..++..++++||.|+...--|++. ...++..|.++..++-
T Consensus 62 PT~~vlE~RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~-- 134 (426)
T COG2873 62 PTTDVLEERIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP-- 134 (426)
T ss_pred chHHHHHHHHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC--
Confidence 345677777777655332 23345567788888999999999999888766654 4445888999999975
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
.|++.+++++++++| +|++.+-. ||-+.+.. +++|.++|+++++++|+|..+..- + =+++
T Consensus 135 -----~d~~~~~~aI~~nTk-avf~Etig-NP~~~v~D---ie~ia~iAh~~gvpliVDNT~atp------y---l~rP- 194 (426)
T COG2873 135 -----DDPENFEAAIDENTK-AVFAETIG-NPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATP------Y---LCRP- 194 (426)
T ss_pred -----CCHHHHHHHhCcccc-eEEEEecc-CCCccccC---HHHHHHHHHHcCCcEEEecCCCcc------e---ecch-
Confidence 368999999999995 99999998 99999988 899999999999999999988421 1 1111
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+. . +-.|+++|+||..|..|--+|-++..
T Consensus 195 ~~---h-----GADIVvHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 195 IE---H-----GADIVVHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred hh---c-----CCCEEEEeecccccCCccccceEEEe
Confidence 11 1 35799999999999999999876654
No 424
>smart00138 MeTrc Methyltransferase, chemotaxis proteins. Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues.
Probab=98.91 E-value=4.7e-09 Score=113.85 Aligned_cols=126 Identities=18% Similarity=0.240 Sum_probs=81.7
Q ss_pred CCCeEEEeCCccCH----HHHHHHHHhC-----CCEEEEEeCCHHHHHHHHHHHHh----cccccCC-CCcchh------
Q 043334 30 KDKTVAELGCGNGW----ITIAIAEKWL-----PSKVYGLDINPRAIRISWINLYL----NALDEKG-QPIYDA------ 89 (903)
Q Consensus 30 ~~~~VLDlGCGtG~----lsi~la~~~~-----~~~V~giDis~~al~~A~~n~~~----~gl~~~~-~~~~~~------ 89 (903)
++.+|+|+|||||. +++.+++..+ +.+|+|+|+|+.|++.|+++... .+++..- ..+-+.
T Consensus 99 ~~~ri~d~GCgtGee~YslA~~l~e~~~~~~~~~~~I~g~Dis~~~L~~Ar~~~y~~~~~~~~~~~~~~~yf~~~~~~~~ 178 (264)
T smart00138 99 RRVRIWSAGCSTGEEPYSLAMLLAETLPKAREPDVKILATDIDLKALEKARAGIYPERELEDLPKALLARYFSRVEDKYR 178 (264)
T ss_pred CCEEEEeccccCChHHHHHHHHHHHHhhhcCCCCeEEEEEECCHHHHHHHHcCCCCHHHHhcCCHHHHhhhEEeCCCeEE
Confidence 45799999999996 6677777654 46899999999999999986421 1110000 000000
Q ss_pred hhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHH
Q 043334 90 EKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLI 169 (903)
Q Consensus 90 ~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~ 169 (903)
-.+.+..+++|.++|+.+..... ++||+|+|.-- ..++. .+..
T Consensus 179 v~~~ir~~V~F~~~dl~~~~~~~-~~fD~I~crnv------l~yf~------------------------------~~~~ 221 (264)
T smart00138 179 VKPELKERVRFAKHNLLAESPPL-GDFDLIFCRNV------LIYFD------------------------------EPTQ 221 (264)
T ss_pred EChHHhCcCEEeeccCCCCCCcc-CCCCEEEechh------HHhCC------------------------------HHHH
Confidence 01112357999999999875433 48999996211 11111 1123
Q ss_pred HHHHHHHhhcccCCcEEEEEeCC
Q 043334 170 ARAVEEGIGVIKPSGIMIFNMGG 192 (903)
Q Consensus 170 ~~~l~~~~~~LkpgG~ll~~~~~ 192 (903)
.++++++++.|+|||.+++....
T Consensus 222 ~~~l~~l~~~L~pGG~L~lg~~E 244 (264)
T smart00138 222 RKLLNRFAEALKPGGYLFLGHSE 244 (264)
T ss_pred HHHHHHHHHHhCCCeEEEEECcc
Confidence 37899999999999999986544
No 425
>PF02475 Met_10: Met-10+ like-protein; InterPro: IPR003402 This entry represents the Trm5 family. Trm5 specifically methylates the N1 position of guanosine-37 in various tRNAs [, , ]. Another members of this family, tRNA wybutosine-synthesizing protein 2 (Tyw2) and its homologues, are S-adenosyl-L-methionine-dependent transferases that act as a component of the wybutosine biosynthesis pathway [, ]. tRNA wybutosine-synthesizing protein 2 was originally thought to be a methyltransferase [].; GO: 0016740 transferase activity; PDB: 3A27_A 2ZZN_B 2YX1_A 2ZZM_A 3AY0_B 3K6R_A 3A26_A 3A25_A.
Probab=98.91 E-value=3.9e-09 Score=109.09 Aligned_cols=82 Identities=23% Similarity=0.423 Sum_probs=62.0
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..++.+|+|+.||.|.+++.+|+..++.+|+++|+||.+++..++|++.|+++ +++..+++|..+
T Consensus 99 v~~~e~VlD~faGIG~f~l~~ak~~~~~~V~A~d~Np~a~~~L~~Ni~lNkv~---------------~~i~~~~~D~~~ 163 (200)
T PF02475_consen 99 VKPGEVVLDMFAGIGPFSLPIAKHGKAKRVYAVDLNPDAVEYLKENIRLNKVE---------------NRIEVINGDARE 163 (200)
T ss_dssp --TT-EEEETT-TTTTTHHHHHHHT-SSEEEEEES-HHHHHHHHHHHHHTT-T---------------TTEEEEES-GGG
T ss_pred CCcceEEEEccCCccHHHHHHhhhcCccEEEEecCCHHHHHHHHHHHHHcCCC---------------CeEEEEcCCHHH
Confidence 34789999999999999999999666789999999999999999999999983 679999999999
Q ss_pred cccCCCCceeEEEECCCCC
Q 043334 108 YCRDHDIQLERIVGCIPQI 126 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~ 126 (903)
... .+.||.|++|.|..
T Consensus 164 ~~~--~~~~drvim~lp~~ 180 (200)
T PF02475_consen 164 FLP--EGKFDRVIMNLPES 180 (200)
T ss_dssp -----TT-EEEEEE--TSS
T ss_pred hcC--ccccCEEEECChHH
Confidence 876 33899999987765
No 426
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=98.90 E-value=7.3e-09 Score=108.09 Aligned_cols=77 Identities=22% Similarity=0.264 Sum_probs=62.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPS-KVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~-~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||||+.+..++...+.. +|+++|+++..++.|++|+...+. .++.++++|...
T Consensus 71 ~pg~~VLeIGtGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~----------------~nv~~~~gdg~~ 134 (209)
T PF01135_consen 71 KPGDRVLEIGTGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGI----------------DNVEVVVGDGSE 134 (209)
T ss_dssp -TT-EEEEES-TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTT----------------HSEEEEES-GGG
T ss_pred CCCCEEEEecCCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhcc----------------CceeEEEcchhh
Confidence 468999999999999999999987543 799999999999999999998886 489999999887
Q ss_pred cccCCCCceeEEEEC
Q 043334 108 YCRDHDIQLERIVGC 122 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~N 122 (903)
..... .+||.|+.+
T Consensus 135 g~~~~-apfD~I~v~ 148 (209)
T PF01135_consen 135 GWPEE-APFDRIIVT 148 (209)
T ss_dssp TTGGG--SEEEEEES
T ss_pred ccccC-CCcCEEEEe
Confidence 65544 389999853
No 427
>PRK06202 hypothetical protein; Provisional
Probab=98.90 E-value=6.2e-09 Score=110.82 Aligned_cols=77 Identities=21% Similarity=0.282 Sum_probs=56.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHh----CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKW----LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDL 105 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~----~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl 105 (903)
++.+|||+|||+|.++..+++.. ++.+|+|+|+|++|++.|+++...+ ++++.++|.
T Consensus 60 ~~~~iLDlGcG~G~~~~~L~~~~~~~g~~~~v~gvD~s~~~l~~a~~~~~~~-------------------~~~~~~~~~ 120 (232)
T PRK06202 60 RPLTLLDIGCGGGDLAIDLARWARRDGLRLEVTAIDPDPRAVAFARANPRRP-------------------GVTFRQAVS 120 (232)
T ss_pred CCcEEEEeccCCCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHhccccC-------------------CCeEEEEec
Confidence 56799999999999999988643 3469999999999999998876332 344555544
Q ss_pred cccccCCCCceeEEEECCCCC
Q 043334 106 LAYCRDHDIQLERIVGCIPQI 126 (903)
Q Consensus 106 ~~~~~~~~~~fD~Iv~NpPy~ 126 (903)
...... +++||+|++|-...
T Consensus 121 ~~l~~~-~~~fD~V~~~~~lh 140 (232)
T PRK06202 121 DELVAE-GERFDVVTSNHFLH 140 (232)
T ss_pred cccccc-CCCccEEEECCeee
Confidence 433322 34899999875443
No 428
>TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family. Members of this family are the m6-adenine DNA methyltransferase protein, or domain of a fusion protein that also carries m5 cytosine methyltransferase activity, of type II restriction systems of the Alw26I/Eco31I/Esp3I family. A methyltransferase of this family is alway accompanied by a type II restriction endonuclease from the Alw26I/Eco31I/Esp3I family (TIGR02986) and by an adenine-specific modification methyltransferase. Members of this family are unusual in that regions of similarity to homologs outside this family are circularly permuted.
Probab=98.90 E-value=1.3e-08 Score=121.28 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=72.9
Q ss_pred CcccCcchhHHHHHHhhcCCCC-C-CCCCeEEEeCCccCHHHHHHHHHhCC--------CEEEEEeCCHHHHHHHHHHHH
Q 043334 6 SIFIPEDWSFTFYEGLNRHPDS-I-LKDKTVAELGCGNGWITIAIAEKWLP--------SKVYGLDINPRAIRISWINLY 75 (903)
Q Consensus 6 ~vfiP~~w~~~~~~~L~~~~~~-~-~~~~~VLDlGCGtG~lsi~la~~~~~--------~~V~giDis~~al~~A~~n~~ 75 (903)
.+|.|..-+..+.+.+...... . ....+|||.|||+|.+.++++...+. .+++|+|+++.++..++.|+.
T Consensus 5 qfyTP~~ia~~mv~~~~~~~~~~~~~~~~~ilDP~cGsG~fl~~~~~~~~~~~~~~~~~~~i~g~DId~~a~~~a~~~l~ 84 (524)
T TIGR02987 5 TFFTPPDIAKAMVANLVNEIGKNDKSTKTKIIDPCCGDGRLIAALLKKNEEINYFKEVELNIYFADIDKTLLKRAKKLLG 84 (524)
T ss_pred ccCCcHHHHHHHHHHHhhhcchhhcccceEEEeCCCCccHHHHHHHHHHHhcCCcccceeeeeeechhHHHHHHHHHHHh
Confidence 3678875555555554332110 0 14568999999999999999887642 579999999999999999986
Q ss_pred hcccccCCCCcchhhhcccCCcEEEEEcccccc----ccCCCCceeEEEECCCCCCC
Q 043334 76 LNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY----CRDHDIQLERIVGCIPQILN 128 (903)
Q Consensus 76 ~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~----~~~~~~~fD~Iv~NpPy~~~ 128 (903)
..+. ..+.+.++|.... .....++||+||+||||...
T Consensus 85 ~~~~----------------~~~~i~~~d~l~~~~~~~~~~~~~fD~IIgNPPy~~~ 125 (524)
T TIGR02987 85 EFAL----------------LEINVINFNSLSYVLLNIESYLDLFDIVITNPPYGRL 125 (524)
T ss_pred hcCC----------------CCceeeecccccccccccccccCcccEEEeCCCcccc
Confidence 5541 1244555554322 11112479999999999964
No 429
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.89 E-value=4.6e-07 Score=105.73 Aligned_cols=245 Identities=10% Similarity=0.049 Sum_probs=148.0
Q ss_pred cCCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCCC---CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNMS---ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~~---~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..| ...++ ..+.+.+++.+.+.+.... ....+....+++.+.+....... + .++++++++++
T Consensus 38 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~-~-~v~f~~SGseA 115 (445)
T PRK08593 38 DVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFE-K-RVTFGLSGSDA 115 (445)
T ss_pred eCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC-C-EEEECCchHHH
Confidence 3567788998655 33344 5788899998888764321 12345566778888775432211 2 79999999998
Q ss_pred HHHHHHHhcc-CC-CeEEEcCCCcHHH-HHHHHHcCC-------------EEEEecCCCCC--Ccc-cC-------HHHH
Q 043334 685 FNKLVLCCIL-EG-GTLCFPAGSNGNY-VSAARFLKA-------------NIVNIPTESEV--GFK-MT-------EKTL 738 (903)
Q Consensus 685 l~~ll~~l~~-pG-D~Vlv~~P~y~~~-~~~~~~~G~-------------~vv~v~~~~~~--~f~-ld-------~~~L 738 (903)
...++..... .| ..|+...-+|-+. .......+. .++.+|..... .+. .+ ++.+
T Consensus 116 ~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 195 (445)
T PRK08593 116 NDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPL 195 (445)
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHH
Confidence 8887764321 23 3566666655443 223222221 12233321100 000 01 1344
Q ss_pred HHHhhc----CCCcEEEEECCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc
Q 043334 739 VTILET----VKKPWVYISGPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS 813 (903)
Q Consensus 739 ~~~l~~----~~~~~vil~~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~ 813 (903)
++.+.. ... +.+|.-|-+...|.+ .+.+.+++|.++|++||+++|.||++.++-..|..+ ....+.-
T Consensus 196 ~~~~~~~~~~~~i-AavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-------a~~~~gv 267 (445)
T PRK08593 196 KEMFEKYLPADEV-ACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-------SISHFNI 267 (445)
T ss_pred HHHHHhhcCCCce-EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-------HHHhcCC
Confidence 444431 233 555555665777876 789999999999999999999999997653333221 1122222
Q ss_pred CCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHh
Q 043334 814 STNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 814 ~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
.| | +-+|||.++ .|+++|+++++++ +++.+.... .+.+.++.+..++.+.|+
T Consensus 268 ~p---D----i~t~gK~l~-~G~p~gav~~~~~-i~~~~~~~~~~~T~~~~pl~~aaa~a~l~ 321 (445)
T PRK08593 268 TP---D----LMSFGKSLA-GGMPMSAIVGRKE-IMESLEAPAHLFTTGANPVSCAAALATID 321 (445)
T ss_pred CC---C----Eeeeccccc-CCcccEEEEEcHH-HHhhhccCCCCCCCCCCHHHHHHHHHHHH
Confidence 22 1 337899997 7899999999887 888875322 255677788887877774
No 430
>PRK06541 hypothetical protein; Provisional
Probab=98.87 E-value=6.3e-07 Score=104.96 Aligned_cols=269 Identities=9% Similarity=0.024 Sum_probs=159.6
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCC--C-CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNM--S-ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~--~-~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...||+..|. ..++ .++.+.+++.+.+.+... . ....+....+++.+.+....+.+ .++++++++++
T Consensus 48 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~---~v~f~~sGseA 124 (460)
T PRK06541 48 DDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLN---RVFFTTGGSEA 124 (460)
T ss_pred eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcC---EEEEcCCcHHH
Confidence 35678889987662 3344 567889998888876421 1 12334556677777765432233 79999999988
Q ss_pred HHHHHHHhcc----C----CCeEEEcCCCcHHHHHHH-HHcCC------------EEEEecCCCCC---CcccC------
Q 043334 685 FNKLVLCCIL----E----GGTLCFPAGSNGNYVSAA-RFLKA------------NIVNIPTESEV---GFKMT------ 734 (903)
Q Consensus 685 l~~ll~~l~~----p----GD~Vlv~~P~y~~~~~~~-~~~G~------------~vv~v~~~~~~---~f~ld------ 734 (903)
...++..... . ..+|+...-+|-+....+ ...|. .+..+|...-- .|.-+
T Consensus 125 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 204 (460)
T PRK06541 125 VESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGR 204 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHH
Confidence 8877764431 1 246776666665433222 11111 12222221100 01112
Q ss_pred --HHHHHHHhhc--CCCcEEEEECCCCCCcccCCC-HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhh
Q 043334 735 --EKTLVTILET--VKKPWVYISGPTINPTGLLYS-NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLS 809 (903)
Q Consensus 735 --~~~L~~~l~~--~~~~~vil~~P~~NPTG~v~s-~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~ 809 (903)
++.+++.+.. ....+.++.-|-+++.|.+.+ .+.+++|.++|+++|+++|.||++.++--.+.. +. ..
T Consensus 205 ~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~---~a----~~ 277 (460)
T PRK06541 205 WAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEM---FG----CE 277 (460)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchh---hh----hh
Confidence 2567777752 122467777786699998865 899999999999999999999999655211111 11 11
Q ss_pred hhccCCCCCCceEEEccCchhcccccc-eeeEEEeCcHHHHHHHHhC-----C-CCCCCcHHHHHHHHHHHhcccccchh
Q 043334 810 KLYSSTNSSFNVSLLGGLSLKMLTGAL-KFGFLVLNHPQLVDAFSSF-----P-GLSKPHSTVRYAIKKLLGLRERKARD 882 (903)
Q Consensus 810 ~l~~~~~~~~~vI~l~S~SK~~g~~Gl-RiG~lv~~~~~li~~l~~~-----~-~~~~~s~~~Q~aa~~~L~~~~~~~~~ 882 (903)
..+-.| .++ +|||.++ .|+ ++|+++++++ +++.+... . .+.+.++..-.++.+.|+.-.. +.
T Consensus 278 ~~gv~P-----Div--t~gK~l~-~G~~pigav~~~~~-i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~--~~ 346 (460)
T PRK06541 278 RFGYVP-----DII--TCAKGIT-SGYSPLGAMIASDR-LFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER--EG 346 (460)
T ss_pred hcCCCC-----CEE--Eeccccc-CCccceeEEEEcHH-HHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--cc
Confidence 111122 222 5899998 787 9999999988 88877532 1 2455566776777777642111 22
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 043334 883 LMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 883 ~~~~l~~~r~~y~~Rr~~ 900 (903)
+.+.+.++.+.++++.+.
T Consensus 347 ~~~~~~~~g~~l~~~L~~ 364 (460)
T PRK06541 347 LLDHVRDNEPAFRATLEK 364 (460)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345555555555555443
No 431
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=98.87 E-value=1.3e-08 Score=119.80 Aligned_cols=126 Identities=20% Similarity=0.198 Sum_probs=88.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. ..+|+|+|+++.|++.+++.. +. .++++++++|+.+..
T Consensus 37 ~~~~vLDlGcG~G~~~~~la~~--~~~v~giD~s~~~l~~a~~~~---~~---------------~~~i~~~~~d~~~~~ 96 (475)
T PLN02336 37 EGKSVLELGAGIGRFTGELAKK--AGQVIALDFIESVIKKNESIN---GH---------------YKNVKFMCADVTSPD 96 (475)
T ss_pred CCCEEEEeCCCcCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHh---cc---------------CCceEEEEecccccc
Confidence 4679999999999999999987 569999999999998875422 11 247999999996421
Q ss_pred -cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 -RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 -~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+...++||+|+++.++...++ +....+++++.++|||||.+++
T Consensus 97 ~~~~~~~fD~I~~~~~l~~l~~------------------------------------~~~~~~l~~~~r~Lk~gG~l~~ 140 (475)
T PLN02336 97 LNISDGSVDLIFSNWLLMYLSD------------------------------------KEVENLAERMVKWLKVGGYIFF 140 (475)
T ss_pred cCCCCCCEEEEehhhhHHhCCH------------------------------------HHHHHHHHHHHHhcCCCeEEEE
Confidence 112248999998755442111 1123789999999999999988
Q ss_pred EeCC---------------CCcHHHHHHHHHHCCCeEE
Q 043334 189 NMGG---------------RPGQGVCKRLFERRGFRVD 211 (903)
Q Consensus 189 ~~~~---------------~~~~~~l~~ll~~~gf~~~ 211 (903)
.... ........+++.+.||...
T Consensus 141 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 178 (475)
T PLN02336 141 RESCFHQSGDSKRKNNPTHYREPRFYTKVFKECHTRDE 178 (475)
T ss_pred EeccCCCCCcccccCCCCeecChHHHHHHHHHheeccC
Confidence 4211 0123445567777776653
No 432
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=98.86 E-value=1e-08 Score=106.63 Aligned_cols=105 Identities=25% Similarity=0.380 Sum_probs=83.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
+.++|||||||+|+-++.+|+..| +.+|+.+|++++..+.|+++++..|++ ++++++.||..+.
T Consensus 45 ~~k~vLEIGt~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~---------------~~I~~~~gda~~~ 109 (205)
T PF01596_consen 45 RPKRVLEIGTFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLD---------------DRIEVIEGDALEV 109 (205)
T ss_dssp T-SEEEEESTTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGG---------------GGEEEEES-HHHH
T ss_pred CCceEEEeccccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCC---------------CcEEEEEeccHhh
Confidence 357999999999999999999876 579999999999999999999998873 6899999999875
Q ss_pred ccC----C-CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 109 CRD----H-DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 109 ~~~----~-~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
... . .++||+|+ +..+. ..|...++.+.+.|+||
T Consensus 110 l~~l~~~~~~~~fD~VF-----iDa~K------------------------------------~~y~~y~~~~~~ll~~g 148 (205)
T PF01596_consen 110 LPELANDGEEGQFDFVF-----IDADK------------------------------------RNYLEYFEKALPLLRPG 148 (205)
T ss_dssp HHHHHHTTTTTSEEEEE-----EESTG------------------------------------GGHHHHHHHHHHHEEEE
T ss_pred HHHHHhccCCCceeEEE-----Ecccc------------------------------------cchhhHHHHHhhhccCC
Confidence 331 1 24799998 21111 11346788888999999
Q ss_pred cEEEEEe
Q 043334 184 GIMIFNM 190 (903)
Q Consensus 184 G~ll~~~ 190 (903)
|.++++-
T Consensus 149 gvii~DN 155 (205)
T PF01596_consen 149 GVIIADN 155 (205)
T ss_dssp EEEEEET
T ss_pred eEEEEcc
Confidence 9999953
No 433
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=98.86 E-value=2.5e-08 Score=108.71 Aligned_cols=142 Identities=16% Similarity=0.138 Sum_probs=97.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
.+++||++|||+|.++..+++..+..+++++|+|+++++.|++++...+. ....++++++.+|..++.
T Consensus 72 ~p~~VL~iG~G~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~------------~~~~~~v~i~~~D~~~~l 139 (270)
T TIGR00417 72 NPKHVLVIGGGDGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAG------------SYDDPRVDLQIDDGFKFL 139 (270)
T ss_pred CCCEEEEEcCCchHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcc------------cccCCceEEEECchHHHH
Confidence 45699999999999999888765567999999999999999998743221 001257899999998765
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|+.+++....+.... ....+++.+.+.|+|||++++.
T Consensus 140 ~~~~~~yDvIi~D~~~~~~~~~~l----------------------------------~~~ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 140 ADTENTFDVIIVDSTDPVGPAETL----------------------------------FTKEFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred HhCCCCccEEEEeCCCCCCcccch----------------------------------hHHHHHHHHHHHhCCCcEEEEc
Confidence 443458999998766432211110 0126788999999999999997
Q ss_pred eCCCC-cHHHHHH---HHHHCCCeEEEEEehhh
Q 043334 190 MGGRP-GQGVCKR---LFERRGFRVDKLWQTKI 218 (903)
Q Consensus 190 ~~~~~-~~~~l~~---ll~~~gf~~~~~~~~~~ 218 (903)
.+... ....++. .+++. |..+..+...+
T Consensus 186 ~~~~~~~~~~~~~~~~tl~~~-F~~v~~~~~~v 217 (270)
T TIGR00417 186 SESPWIQLELITDLKRDVKEA-FPITEYYTANI 217 (270)
T ss_pred CCCcccCHHHHHHHHHHHHHH-CCCeEEEEEEc
Confidence 55432 2333222 23333 77776655543
No 434
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=98.86 E-value=3.5e-07 Score=99.73 Aligned_cols=217 Identities=14% Similarity=0.153 Sum_probs=151.0
Q ss_pred CCCcHHHHHHHHHHHHccCCC-------CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCch---HHHHHHHHHHhccCC
Q 043334 627 LPIPSLVKAAIFESFARQNMS-------ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCS---QSLFNKLVLCCILEG 696 (903)
Q Consensus 627 ~~~p~~v~~al~~al~~y~~~-------~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs---~~al~~ll~~l~~pG 696 (903)
..-.+.+++++.+.+.+|+.. .|.......+++.+++.++.+.. +++++-- ..-+..+...+ ||
T Consensus 184 ms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aA----LlFsSCfVANDstLftLak~l--pg 257 (570)
T KOG1360|consen 184 MSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAA----LLFSSCFVANDSTLFTLAKKL--PG 257 (570)
T ss_pred ccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcce----eeeeeeeeccchHHHHHHHHC--CC
Confidence 345789999999999987542 34555666777888887776533 3333211 12244444433 88
Q ss_pred CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc---CCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 697 GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET---VKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 697 D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~---~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
-+|.-..-.+.....-++..|+.-..+.. -|++.|++++.. ..+++|-+.+-+ ..+|.+.+ +++|+
T Consensus 258 cei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~svPKivAFEtVh-SM~Gavcp---leelc 326 (570)
T KOG1360|consen 258 CEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPKSVPKIVAFETVH-SMDGAVCP---LEELC 326 (570)
T ss_pred cEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCCCCCceEEEeeee-ccCCCcCC---HHHHH
Confidence 88888887888888888888877665554 268888888764 234577777776 99999999 88999
Q ss_pred HHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~ 853 (903)
+++++||.+-.+||+++--.|+..... +..-++.. ..-.|.-+++.|+||+-| |||.+... +++.++
T Consensus 327 Dvah~yGAiTFlDEVHAVGlYG~rGaG-------vgerdGvm--~kvDiIsGTLgKafGcVG---GYIAat~~-LvDmiR 393 (570)
T KOG1360|consen 327 DVAHKYGAITFLDEVHAVGLYGPRGAG-------VGERDGVM--HKVDIISGTLGKAFGCVG---GYIAATRK-LVDMIR 393 (570)
T ss_pred HHHHHhCceeeeehhhhhccccCCCCC-------ccccCCcc--hhhhhcccchhhhccccc---ceehhhhh-HHHHHH
Confidence 999999999999999987778765431 11111111 125688999999999888 99999998 999999
Q ss_pred hCCC----CCCCcHHHHHHHHHHH
Q 043334 854 SFPG----LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 854 ~~~~----~~~~s~~~Q~aa~~~L 873 (903)
.+.. +.+.++..-..|..+.
T Consensus 394 SyAaGFIFTTSLPP~vl~GAleaV 417 (570)
T KOG1360|consen 394 SYAAGFIFTTSLPPMVLAGALEAV 417 (570)
T ss_pred HhcCceEEecCCChHHHHhHHHHH
Confidence 9874 3333444444444443
No 435
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=98.86 E-value=5e-07 Score=105.99 Aligned_cols=202 Identities=9% Similarity=0.012 Sum_probs=122.7
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHH-HccCCC-------CCchHHHHHHHH----HHHhhcCCCCCCCCcEEe----c
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESF-ARQNMS-------ESEIDVTPSIQQ----YIKSNFGFPIDINAEFIY----A 678 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al-~~y~~~-------~G~~~lr~ala~----~l~~~~G~~~~pe~~I~v----t 678 (903)
...|+|-.++|. +++.+++++...+ .+|... .|.. +.+.+.+ ...+.++...+ .+.+ .
T Consensus 34 ~~~l~liasen~--~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~~~~---~~~~nv~~~ 107 (475)
T PLN03226 34 WKGLELIASENF--TSRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRLDPE---KWGVNVQPL 107 (475)
T ss_pred HcCeeEecCCcc--CCHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCCCcc---eeEEecCcC
Confidence 467788777775 4677888888887 455321 2332 4344433 34455666543 3433 5
Q ss_pred CchHHHHHHHHHHhccCCCeEEEcCC---CcHHHHHHH---HHcCCEE----EEecCCCCCCcccCHHHHHHHhhcCCCc
Q 043334 679 DCSQSLFNKLVLCCILEGGTLCFPAG---SNGNYVSAA---RFLKANI----VNIPTESEVGFKMTEKTLVTILETVKKP 748 (903)
Q Consensus 679 ~Gs~~al~~ll~~l~~pGD~Vlv~~P---~y~~~~~~~---~~~G~~v----v~v~~~~~~~f~ld~~~L~~~l~~~~~~ 748 (903)
+|+++.+. ++.++++|||+|+..+. +|..+.... +..+... +++..+. ++..+|++++++.+...+++
T Consensus 108 SG~~AN~a-v~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~pk 185 (475)
T PLN03226 108 SGSPANFA-VYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRPK 185 (475)
T ss_pred chHHHHHH-HHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCCe
Confidence 66555554 68889999999998553 333322221 1122222 2445554 34569999999988754434
Q ss_pred EEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc
Q 043334 749 WVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS 828 (903)
Q Consensus 749 ~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S 828 (903)
+ +++..+ + +|...+ +++|.++|+++|+++++|+++..-.......+ ..++ ...++++|++
T Consensus 186 l-Iv~~~S-~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~--------~p~~------~~Div~~t~h 245 (475)
T PLN03226 186 L-IIAGAS-A-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAA--------SPFE------YCDVVTTTTH 245 (475)
T ss_pred E-EEEecC-c-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCC--------CCCC------CCeEEEecCc
Confidence 4 455444 4 666666 66888999999999999998853232222110 0011 2458899999
Q ss_pred hhcccccceeeEEEeCcH
Q 043334 829 LKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 829 K~~g~~GlRiG~lv~~~~ 846 (903)
|+++ |-+-|++++++.
T Consensus 246 K~L~--GP~Gg~I~~~~~ 261 (475)
T PLN03226 246 KSLR--GPRGGMIFFRKG 261 (475)
T ss_pred cccc--CCCceEEEEchh
Confidence 9983 344489988764
No 436
>PRK07580 Mg-protoporphyrin IX methyl transferase; Validated
Probab=98.85 E-value=3.5e-08 Score=104.53 Aligned_cols=73 Identities=23% Similarity=0.367 Sum_probs=59.6
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+. .+++.+..+|+...
T Consensus 62 ~~~~~vLDvGcG~G~~~~~l~~~--~~~v~~~D~s~~~i~~a~~~~~~~~~---------------~~~i~~~~~d~~~~ 124 (230)
T PRK07580 62 LTGLRILDAGCGVGSLSIPLARR--GAKVVASDISPQMVEEARERAPEAGL---------------AGNITFEVGDLESL 124 (230)
T ss_pred CCCCEEEEEeCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCC---------------ccCcEEEEcCchhc
Confidence 35679999999999999999886 56799999999999999999876654 24799999994332
Q ss_pred ccCCCCceeEEEEC
Q 043334 109 CRDHDIQLERIVGC 122 (903)
Q Consensus 109 ~~~~~~~fD~Iv~N 122 (903)
.++||+|+++
T Consensus 125 ----~~~fD~v~~~ 134 (230)
T PRK07580 125 ----LGRFDTVVCL 134 (230)
T ss_pred ----cCCcCEEEEc
Confidence 2379999864
No 437
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH. They methylate the guanosine in position 966 of 16S rRNA in the assembled 30S particle [].; GO: 0008168 methyltransferase activity, 0031167 rRNA methylation; PDB: 3P9N_A 2ESR_B 2IFT_A 1WS6_A 2FPO_B 2FHP_A.
Probab=98.85 E-value=1.1e-08 Score=104.58 Aligned_cols=121 Identities=17% Similarity=0.229 Sum_probs=84.9
Q ss_pred HHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccC
Q 043334 16 TFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLL 95 (903)
Q Consensus 16 ~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~ 95 (903)
.++..|... . .++.++||+.||||.+++.+..+ +..+|+.+|.|+.+++..++|++..+.+
T Consensus 31 alFniL~~~-~--~~g~~vLDLFaGSGalGlEALSR-GA~~v~fVE~~~~a~~~i~~N~~~l~~~--------------- 91 (183)
T PF03602_consen 31 ALFNILQPR-N--LEGARVLDLFAGSGALGLEALSR-GAKSVVFVEKNRKAIKIIKKNLEKLGLE--------------- 91 (183)
T ss_dssp HHHHHHHCH----HTT-EEEETT-TTSHHHHHHHHT-T-SEEEEEES-HHHHHHHHHHHHHHT-G---------------
T ss_pred HHHHHhccc-c--cCCCeEEEcCCccCccHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHHhCCC---------------
Confidence 445555543 1 46899999999999999997665 4679999999999999999999888762
Q ss_pred CcEEEEEccccccccC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHH
Q 043334 96 DRVEFHESDLLAYCRD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARA 172 (903)
Q Consensus 96 ~~v~~~~gDl~~~~~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~ 172 (903)
+++.++.+|....... ...+||+|+.+|||..... +..+
T Consensus 92 ~~~~v~~~d~~~~l~~~~~~~~~fDiIflDPPY~~~~~--------------------------------------~~~~ 133 (183)
T PF03602_consen 92 DKIRVIKGDAFKFLLKLAKKGEKFDIIFLDPPYAKGLY--------------------------------------YEEL 133 (183)
T ss_dssp GGEEEEESSHHHHHHHHHHCTS-EEEEEE--STTSCHH--------------------------------------HHHH
T ss_pred cceeeeccCHHHHHHhhcccCCCceEEEECCCcccchH--------------------------------------HHHH
Confidence 4699999997655421 2348999999999984210 1133
Q ss_pred HHHHh--hcccCCcEEEEEeCCC
Q 043334 173 VEEGI--GVIKPSGIMIFNMGGR 193 (903)
Q Consensus 173 l~~~~--~~LkpgG~ll~~~~~~ 193 (903)
++.+. .+|+++|.+++++...
T Consensus 134 l~~l~~~~~l~~~~~ii~E~~~~ 156 (183)
T PF03602_consen 134 LELLAENNLLNEDGLIIIEHSKK 156 (183)
T ss_dssp HHHHHHTTSEEEEEEEEEEEETT
T ss_pred HHHHHHCCCCCCCEEEEEEecCC
Confidence 44443 7899999999998765
No 438
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.84 E-value=1.3e-07 Score=109.46 Aligned_cols=198 Identities=13% Similarity=0.124 Sum_probs=141.7
Q ss_pred CCcHHHHHHHHHHHHcc-C-C--CCCchHHHHHHHHHHHhhcCCCCCCCCcE--EecCchHHHHHHHHHHhcc-------
Q 043334 628 PIPSLVKAAIFESFARQ-N-M--SESEIDVTPSIQQYIKSNFGFPIDINAEF--IYADCSQSLFNKLVLCCIL------- 694 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y-~-~--~~G~~~lr~ala~~l~~~~G~~~~pe~~I--~vt~Gs~~al~~ll~~l~~------- 694 (903)
++.+.+.+.+...+.+. . + .....++.+.+.+++++.+|.+...+ ++ .+|+|++++...++.+...
T Consensus 52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~-~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDA-EAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCC-CCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 34555777777777532 1 1 12234677888999999999862101 34 3489999998887755421
Q ss_pred -CC-----CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHH
Q 043334 695 -EG-----GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 695 -pG-----D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
.| -.|+++.-.+.++..+++..|.++..+|+++ +++.+|+++|++++++++ .+|+++..| |.||.+-+
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t-~lV~~t~g~-t~tG~idp--- 204 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENT-IGVVCILGT-TYTGEYED--- 204 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCC-eEEEEEeCC-CCCcccCC---
Confidence 12 3699999999999999999999999999976 456799999999998877 488899998 99999988
Q ss_pred HHHHHHHHHhC------CcEEEEecCCCCCc--cCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceee
Q 043334 769 IENILTVCAKY------GARVVIDTAFSGLE--FNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFG 839 (903)
Q Consensus 769 l~eI~~ia~k~------~i~VI~DeaY~~l~--f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG 839 (903)
+++|.++|+++ |+++.+|-+|++.. |.-.... +. +. .. .-..+.-|..|.+ +..| +|
T Consensus 205 i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~-~~----~~-~~------~~DSis~s~HK~~~~P~g--~G 270 (431)
T TIGR01788 205 VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLE-WD----FR-LP------RVKSINVSGHKYGLVYPG--VG 270 (431)
T ss_pred HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCch-hh----cC-CC------CceEEEECchhccCCCCC--cE
Confidence 88888888999 99999999997432 2111110 00 11 11 2345778889965 5444 79
Q ss_pred EEEeCcH
Q 043334 840 FLVLNHP 846 (903)
Q Consensus 840 ~lv~~~~ 846 (903)
+++..+.
T Consensus 271 ~l~~r~~ 277 (431)
T TIGR01788 271 WVIWRDE 277 (431)
T ss_pred EEEEeCh
Confidence 8888765
No 439
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=98.84 E-value=4e-08 Score=104.69 Aligned_cols=129 Identities=19% Similarity=0.182 Sum_probs=96.6
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
+.+|.+|||.|+|+|.++.+++... |..+|+..|+.++.++.|++|++.+|+ .+++++.+.|+.
T Consensus 38 i~pG~~VlEaGtGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl---------------~~~v~~~~~Dv~ 102 (247)
T PF08704_consen 38 IRPGSRVLEAGTGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGL---------------DDNVTVHHRDVC 102 (247)
T ss_dssp --TT-EEEEE--TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTC---------------CTTEEEEES-GG
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCC---------------CCCceeEeccee
Confidence 3479999999999999999999876 456999999999999999999999987 368999999997
Q ss_pred ccccC--CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcc-cCC
Q 043334 107 AYCRD--HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVI-KPS 183 (903)
Q Consensus 107 ~~~~~--~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~L-kpg 183 (903)
+.-.. .+..+|.|+...|-- . ..+..+.+.| |+|
T Consensus 103 ~~g~~~~~~~~~DavfLDlp~P-----w--------------------------------------~~i~~~~~~L~~~g 139 (247)
T PF08704_consen 103 EEGFDEELESDFDAVFLDLPDP-----W--------------------------------------EAIPHAKRALKKPG 139 (247)
T ss_dssp CG--STT-TTSEEEEEEESSSG-----G--------------------------------------GGHHHHHHHE-EEE
T ss_pred cccccccccCcccEEEEeCCCH-----H--------------------------------------HHHHHHHHHHhcCC
Confidence 53221 124799998432211 0 3577888999 899
Q ss_pred cEEEEEeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 184 GIMIFNMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 184 G~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
|++.+..+.-......-+.+++.||..++.+
T Consensus 140 G~i~~fsP~ieQv~~~~~~L~~~gf~~i~~~ 170 (247)
T PF08704_consen 140 GRICCFSPCIEQVQKTVEALREHGFTDIETV 170 (247)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTEEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHHCCCeeeEEE
Confidence 9999988876555555678889999877653
No 440
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=98.83 E-value=1.5e-07 Score=99.00 Aligned_cols=212 Identities=14% Similarity=0.111 Sum_probs=147.0
Q ss_pred CCCeEEccCCC-CCCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 614 NSGLIHMDVDQ-SFLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 614 ~~~~IdLs~g~-p~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..++++|+.++ ..+...|++.++-.+++.+|+. ..|.....+.++..+++.+|.+. .|+..++-. +.
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED----~ilypscfd-AN 140 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED----TILYPSCFD-AN 140 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCc----eEEeccccc-cc
Confidence 34678877544 2244678999999999998864 35788888899999999877542 365555544 44
Q ss_pred HHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC---CCcEEEEECCCCCCccc
Q 043334 686 NKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV---KKPWVYISGPTINPTGL 762 (903)
Q Consensus 686 ~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~---~~~~vil~~P~~NPTG~ 762 (903)
..++.+++.|.|.|+-..-.+.+...-++.+. +. -..|+..++..+.+. +.++|+-..- -...|.
T Consensus 141 ag~feail~pedAvfSDeLNhASIIdGirLck-ry----------~h~dv~~l~~~l~~a~k~r~klv~TDg~-FSMDGd 208 (417)
T KOG1359|consen 141 AGAFEAILTPEDAVFSDELNHASIIDGIRLCK-RY----------RHVDVFDLEHCLISACKMRLKLVVTDGV-FSMDGD 208 (417)
T ss_pred hHHHHHhcChhhhhhccccccchhhhhhHHHh-hh----------ccchhHHHHHHHHHhhhheEEEEEecce-eccCCC
Confidence 44577889999999988888887776665544 11 114555565544321 2234444444 488899
Q ss_pred CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 763 LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
+.| +++|.++++|||.++++||+++-..|+.... .....+.-+. +..|..++++|.+| |---||..
T Consensus 209 iaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGr------Gt~E~~~vm~---~vdiinsTLgKAlG--ga~GGytt 274 (417)
T KOG1359|consen 209 IAP---LEEISQLAKKYGALLFIDECHATGFFGETGR------GTAEEFGVMG---DVDIINSTLGKALG--GASGGYTT 274 (417)
T ss_pred ccc---HHHHHHHHHhcCcEEEEeecccceeecCCCC------ChHHHhCCCC---cceehhhhhhhhhc--CCCCCCcc
Confidence 999 7888899999999999999998777765442 1122222222 47889999999997 34449999
Q ss_pred eCcHHHHHHHHhCCC
Q 043334 843 LNHPQLVDAFSSFPG 857 (903)
Q Consensus 843 ~~~~~li~~l~~~~~ 857 (903)
+|.+ +++-++....
T Consensus 275 gp~~-li~llrqr~R 288 (417)
T KOG1359|consen 275 GPKP-LISLLRQRSR 288 (417)
T ss_pred CChh-HHHHHHhcCC
Confidence 9998 9988886654
No 441
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.82 E-value=5.8e-08 Score=121.02 Aligned_cols=177 Identities=14% Similarity=0.093 Sum_probs=138.1
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH----HHHHHHHHHhccC-CC----eEEEcCCCcHHHHHHHHHcC
Q 043334 647 SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ----SLFNKLVLCCILE-GG----TLCFPAGSNGNYVSAARFLK 717 (903)
Q Consensus 647 ~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~----~al~~ll~~l~~p-GD----~Vlv~~P~y~~~~~~~~~~G 717 (903)
.+|+.++...+++++++.+|. + +|.++++++ .++.+++.++.++ || .|+++...+......+...|
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~--~---~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G 637 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGF--D---SFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCG 637 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--C---eEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCC
Confidence 467888888899999999887 3 799999888 8888899999877 88 89999999999888888899
Q ss_pred CEEEEecCCCCCCcccCHHHHHHHhhc---CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCcc
Q 043334 718 ANIVNIPTESEVGFKMTEKTLVTILET---VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEF 794 (903)
Q Consensus 718 ~~vv~v~~~~~~~f~ld~~~L~~~l~~---~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f 794 (903)
.+++.+++++ +..+|+++|++++++ ++ ++|++++|+ |-+|...+ +++|.++|+++|+.+++|-+...-..
T Consensus 638 ~~vv~v~~d~--~G~vDle~L~~~i~~~~~~t-a~V~vt~pS-n~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~ 710 (993)
T PLN02414 638 MKIVVVGTDA--KGNINIEELRKAAEAHKDNL-AALMVTYPS-THGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQV 710 (993)
T ss_pred CEEEEeccCC--CCCcCHHHHHHHHhccCCCe-EEEEEECCC-ccccccch---HHHHHHHHHHcCCEEEEEecCHHhcc
Confidence 9999999974 336999999999985 34 589999998 99988865 89999999999999999998732000
Q ss_pred CCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcc----cccceeeEEEeCcHHHHHHH
Q 043334 795 NYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKML----TGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 795 ~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g----~~GlRiG~lv~~~~~li~~l 852 (903)
+. ...... +-.++++|.-|+|+ ..|=-+|++.+... +...+
T Consensus 711 -~l-----------~~p~~~----GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~-L~p~l 755 (993)
T PLN02414 711 -GL-----------TSPGFI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFL 755 (993)
T ss_pred -Cc-----------CCcccc----CCCEEEecCCccCCcCcccCCCCeeeEEEchh-hcccC
Confidence 00 000111 35788888999775 22334788888765 55443
No 442
>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only]
Probab=98.82 E-value=4.7e-09 Score=106.95 Aligned_cols=129 Identities=19% Similarity=0.359 Sum_probs=91.4
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc-
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR- 110 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~- 110 (903)
+++||+|||||..+..+-.. ..+.+|+|||+.|++.|.++-- |+ .+.+.|+..+..
T Consensus 127 ~~~lDLGCGTGL~G~~lR~~--a~~ltGvDiS~nMl~kA~eKg~-----------YD----------~L~~Aea~~Fl~~ 183 (287)
T COG4976 127 RRMLDLGCGTGLTGEALRDM--ADRLTGVDISENMLAKAHEKGL-----------YD----------TLYVAEAVLFLED 183 (287)
T ss_pred ceeeecccCcCcccHhHHHH--HhhccCCchhHHHHHHHHhccc-----------hH----------HHHHHHHHHHhhh
Confidence 68999999999999998776 5799999999999999987531 11 234555544443
Q ss_pred CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEe
Q 043334 111 DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNM 190 (903)
Q Consensus 111 ~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~ 190 (903)
..+.+||+|++- +-..| ++.+..++-.+...|+|||.|.|.+
T Consensus 184 ~~~er~DLi~Aa------DVl~Y--------------------------------lG~Le~~~~~aa~~L~~gGlfaFSv 225 (287)
T COG4976 184 LTQERFDLIVAA------DVLPY--------------------------------LGALEGLFAGAAGLLAPGGLFAFSV 225 (287)
T ss_pred ccCCcccchhhh------hHHHh--------------------------------hcchhhHHHHHHHhcCCCceEEEEe
Confidence 223489999731 11111 1223477889999999999999944
Q ss_pred CC---------------CCcHHHHHHHHHHCCCeEEEEEehhhhcc
Q 043334 191 GG---------------RPGQGVCKRLFERRGFRVDKLWQTKILQA 221 (903)
Q Consensus 191 ~~---------------~~~~~~l~~ll~~~gf~~~~~~~~~~~~~ 221 (903)
.. -..+..++.+++..||.++.+.+..+.+.
T Consensus 226 E~l~~~~~f~l~ps~RyAH~~~YVr~~l~~~Gl~~i~~~~ttiR~d 271 (287)
T COG4976 226 ETLPDDGGFVLGPSQRYAHSESYVRALLAASGLEVIAIEDTTIRRD 271 (287)
T ss_pred cccCCCCCeecchhhhhccchHHHHHHHHhcCceEEEeecccchhh
Confidence 31 12456778899999999999876665544
No 443
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.82 E-value=4.9e-07 Score=105.12 Aligned_cols=206 Identities=15% Similarity=0.192 Sum_probs=150.4
Q ss_pred CCcHHHHHHHHHHHHccC----CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccC--------
Q 043334 628 PIPSLVKAAIFESFARQN----MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILE-------- 695 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~----~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~p-------- 695 (903)
.+++...+.+...+.+.. ...+...+-+.+..++.+.++.+... .=.+|+|++++..+.+.+..+.
T Consensus 73 ~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~--~G~~t~GgTean~lal~aar~~~~~~~~~~ 150 (460)
T COG0076 73 RVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEA--SGTFTSGGTEANLLALLAARERWRKRALAE 150 (460)
T ss_pred CCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCC--ceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence 345566666666665421 23356677788999999999987442 4678888888877666554211
Q ss_pred CC------eEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCc-EEEEECCCCCCcccCCCHHH
Q 043334 696 GG------TLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKP-WVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 696 GD------~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~-~vil~~P~~NPTG~v~s~ee 768 (903)
+. .|+++.-.+..+..++.++|.....++++.. ++.+|++++++++++.+.. +|+-+-++ -|||.+ +.
T Consensus 151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGt-T~~G~i---Dd 225 (460)
T COG0076 151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGT-TDTGSI---DD 225 (460)
T ss_pred ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecC-CCCCcc---CC
Confidence 11 6999999999999999999999999999874 6889999999999988753 27777787 899988 56
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCc--cCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLE--FNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~--f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
+++|.++|+++++++.+|-+|+++. |..... .....++ .-.-+.-++-|. |.+=.-+||++..++
T Consensus 226 i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~------~~~f~l~------~vdSIt~d~HK~-g~aP~~~G~il~rd~ 292 (460)
T COG0076 226 IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG------RWDFGLE------GVDSITVDGHKY-GLAPIGCGVVLFRDE 292 (460)
T ss_pred HHHHHHHHHHcCCcEEEEccccceeecccCccc------hhhcCCC------CceEEEECcccc-cCCCCCceEEEEECH
Confidence 9999999999999999999998754 333321 0011121 134466788995 466777999999987
Q ss_pred -HHHHHHH
Q 043334 847 -QLVDAFS 853 (903)
Q Consensus 847 -~li~~l~ 853 (903)
.+.+.+.
T Consensus 293 e~l~~~~~ 300 (460)
T COG0076 293 EALRRILI 300 (460)
T ss_pred HHhhhhhh
Confidence 3555444
No 444
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.82 E-value=2.3e-07 Score=111.83 Aligned_cols=173 Identities=12% Similarity=0.085 Sum_probs=124.1
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH-HHHcCCEEEEecCCCCCCcc
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA-ARFLKANIVNIPTESEVGFK 732 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~-~~~~G~~vv~v~~~~~~~f~ 732 (903)
..+..+..++.||.+.+ .+++||++.++..++.+++.+||.|+++..++-+.... +.+.|+++++++... +.|.
T Consensus 176 i~eAq~~AA~~fgAd~t----yFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n~~G 250 (720)
T PRK13578 176 AKDAQKHAAKVFNADKT----YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-NPFG 250 (720)
T ss_pred HHHHHHHHHHHhCCCce----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-cccC
Confidence 34566777788888755 99999999999999999999999999999999998885 899999999997654 3333
Q ss_pred ----cCH-----HHHHHHhhcC--------C-CcEEEEECCCCCCcccCCCHHHHHHHHHH-HHhCCcEEEEecCCCC-C
Q 043334 733 ----MTE-----KTLVTILETV--------K-KPWVYISGPTINPTGLLYSNKEIENILTV-CAKYGARVVIDTAFSG-L 792 (903)
Q Consensus 733 ----ld~-----~~L~~~l~~~--------~-~~~vil~~P~~NPTG~v~s~eel~eI~~i-a~k~~i~VI~DeaY~~-l 792 (903)
+++ +.+++++.+. + .++++|++|+ --|.++. +++|++. ++.++ .|++||+|.. +
T Consensus 251 i~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT--YdG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 251 FIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT--YDGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred CcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC--Ccceeec---HHHHHHHhhccCC-cEEEeCcchhhh
Confidence 354 4488877654 1 2589999996 8899998 6777777 56777 8999999964 3
Q ss_pred ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee-EEEeCc
Q 043334 793 EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVLNH 845 (903)
Q Consensus 793 ~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~~~ 845 (903)
.|.+.-. .++.+...+... +-.++++.|.-|.+ +|+--+ ++...+
T Consensus 325 ~F~p~~~---~~p~~al~~GaD---~p~i~v~QStHKtL--~alTQaS~LHvk~ 370 (720)
T PRK13578 325 QFIPMMA---DCSPLLLELNEN---DPGIFVTQSVHKQQ--AGFSQTSQIHKKD 370 (720)
T ss_pred ccCcccc---cCChhhhhcCCC---CCCeEEEEChhhcc--hhhhhHhhhhcCC
Confidence 4543210 011111111111 12579999999987 466655 555543
No 445
>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional
Probab=98.82 E-value=2.6e-08 Score=113.25 Aligned_cols=100 Identities=23% Similarity=0.205 Sum_probs=82.6
Q ss_pred CCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR 110 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~ 110 (903)
+.+|||++||+|.+++.++...+..+|+++|+|+.+++.+++|++.|++ ++++++++|+..+..
T Consensus 58 ~~~vLDl~aGsG~~~l~~a~~~~~~~V~a~Din~~Av~~a~~N~~~N~~----------------~~~~v~~~Da~~~l~ 121 (382)
T PRK04338 58 RESVLDALSASGIRGIRYALETGVEKVTLNDINPDAVELIKKNLELNGL----------------ENEKVFNKDANALLH 121 (382)
T ss_pred CCEEEECCCcccHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC----------------CceEEEhhhHHHHHh
Confidence 3689999999999999999887656999999999999999999999987 367899999987654
Q ss_pred CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 111 DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 111 ~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. ..+||+|+.||| - .+ ..+++.+.+.+++||.+++.
T Consensus 122 ~-~~~fD~V~lDP~-G-s~----------------------------------------~~~l~~al~~~~~~gilyvS 157 (382)
T PRK04338 122 E-ERKFDVVDIDPF-G-SP----------------------------------------APFLDSAIRSVKRGGLLCVT 157 (382)
T ss_pred h-cCCCCEEEECCC-C-Cc----------------------------------------HHHHHHHHHHhcCCCEEEEE
Confidence 2 237999999986 1 11 04567777888999999996
No 446
>PTZ00338 dimethyladenosine transferase-like protein; Provisional
Probab=98.81 E-value=1.3e-08 Score=111.77 Aligned_cols=81 Identities=23% Similarity=0.297 Sum_probs=69.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.+++++..++. .++++++++|+.+.
T Consensus 35 ~~~~~VLEIG~G~G~LT~~Ll~~--~~~V~avEiD~~li~~l~~~~~~~~~---------------~~~v~ii~~Dal~~ 97 (294)
T PTZ00338 35 KPTDTVLEIGPGTGNLTEKLLQL--AKKVIAIEIDPRMVAELKKRFQNSPL---------------ASKLEVIEGDALKT 97 (294)
T ss_pred CCcCEEEEecCchHHHHHHHHHh--CCcEEEEECCHHHHHHHHHHHHhcCC---------------CCcEEEEECCHhhh
Confidence 35789999999999999999987 57899999999999999999876553 25899999999886
Q ss_pred ccCCCCceeEEEECCCCCCCC
Q 043334 109 CRDHDIQLERIVGCIPQILNP 129 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~ 129 (903)
... .||.|++|+||....
T Consensus 98 ~~~---~~d~VvaNlPY~Ist 115 (294)
T PTZ00338 98 EFP---YFDVCVANVPYQISS 115 (294)
T ss_pred ccc---ccCEEEecCCcccCc
Confidence 432 689999999998544
No 447
>PLN02366 spermidine synthase
Probab=98.80 E-value=6.4e-08 Score=106.87 Aligned_cols=117 Identities=17% Similarity=0.169 Sum_probs=84.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
+.++||++|||.|..+..+++..+..+|+.+|+|+++++.|++.+...+. .--.+|++++.+|..++.
T Consensus 91 ~pkrVLiIGgG~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~------------~~~dpRv~vi~~Da~~~l 158 (308)
T PLN02366 91 NPKKVLVVGGGDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAV------------GFDDPRVNLHIGDGVEFL 158 (308)
T ss_pred CCCeEEEEcCCccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhcc------------ccCCCceEEEEChHHHHH
Confidence 57899999999999999998763346999999999999999998743211 001358999999998775
Q ss_pred cCC-CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RDH-DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~-~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... +++||+|+++.+--..+ .... ....+++.+.+.|+|||+++.
T Consensus 159 ~~~~~~~yDvIi~D~~dp~~~-----~~~L-----------------------------~t~ef~~~~~~~L~pgGvlv~ 204 (308)
T PLN02366 159 KNAPEGTYDAIIVDSSDPVGP-----AQEL-----------------------------FEKPFFESVARALRPGGVVCT 204 (308)
T ss_pred hhccCCCCCEEEEcCCCCCCc-----hhhh-----------------------------hHHHHHHHHHHhcCCCcEEEE
Confidence 432 34899999753211100 0000 123789999999999999988
Q ss_pred EeCC
Q 043334 189 NMGG 192 (903)
Q Consensus 189 ~~~~ 192 (903)
..++
T Consensus 205 q~~s 208 (308)
T PLN02366 205 QAES 208 (308)
T ss_pred CcCC
Confidence 6554
No 448
>PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2.1.1.33 from EC), which catalyses the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA []. The reaction is catalysed by three enzymes: triphosphatase, guanylyltransferase, and tRNA (guanine-N-7) methyltransferase [, ].; GO: 0008176 tRNA (guanine-N7-)-methyltransferase activity, 0006400 tRNA modification; PDB: 3DXZ_A 3DXY_A 3DXX_A 3CKK_A 3P2I_B 3P2K_D 3P2E_A 3MTE_B 3PB3_B 1YZH_B ....
Probab=98.80 E-value=3.7e-08 Score=101.91 Aligned_cols=135 Identities=21% Similarity=0.244 Sum_probs=94.8
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc-
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR- 110 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~- 110 (903)
..+||||||.|.+.+.+|+..|+..++|+|+....+..|..++...++ +|+.++++|+.....
T Consensus 19 ~l~lEIG~G~G~~l~~~A~~~Pd~n~iGiE~~~~~v~~a~~~~~~~~l----------------~Nv~~~~~da~~~l~~ 82 (195)
T PF02390_consen 19 PLILEIGCGKGEFLIELAKRNPDINFIGIEIRKKRVAKALRKAEKRGL----------------KNVRFLRGDARELLRR 82 (195)
T ss_dssp EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHHTT----------------SSEEEEES-CTTHHHH
T ss_pred CeEEEecCCCCHHHHHHHHHCCCCCEEEEecchHHHHHHHHHHHhhcc----------------cceEEEEccHHHHHhh
Confidence 389999999999999999999999999999999999999999988887 699999999877421
Q ss_pred -CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 111 -DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 111 -~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
...+++|.|.-|-|- | ...-.+.-+ .+. -..+++...+.|+|||.+.+.
T Consensus 83 ~~~~~~v~~i~i~FPD---P-WpK~rH~kr---------------Rl~-----------~~~fl~~~~~~L~~gG~l~~~ 132 (195)
T PF02390_consen 83 LFPPGSVDRIYINFPD---P-WPKKRHHKR---------------RLV-----------NPEFLELLARVLKPGGELYFA 132 (195)
T ss_dssp HSTTTSEEEEEEES---------SGGGGGG---------------STT-----------SHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCchheEEEeCCC---C-Ccccchhhh---------------hcC-----------CchHHHHHHHHcCCCCEEEEE
Confidence 112489999755221 1 011000000 011 127899999999999999998
Q ss_pred eCCCCcHHHHHHHHHH--CCCeEEE
Q 043334 190 MGGRPGQGVCKRLFER--RGFRVDK 212 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~--~gf~~~~ 212 (903)
+....-.....+.+.+ .+|+...
T Consensus 133 TD~~~y~~~~~~~~~~~~~~f~~~~ 157 (195)
T PF02390_consen 133 TDVEEYAEWMLEQFEESHPGFENIE 157 (195)
T ss_dssp ES-HHHHHHHHHHHHHHSTTEEEE-
T ss_pred eCCHHHHHHHHHHHHhcCcCeEEcc
Confidence 8776555555667777 3677653
No 449
>PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional
Probab=98.80 E-value=1.5e-08 Score=109.77 Aligned_cols=76 Identities=25% Similarity=0.412 Sum_probs=65.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++.. . ++++++++|+.+..
T Consensus 29 ~~~~VLEIG~G~G~lt~~L~~~--~~~v~~vEid~~~~~~l~~~~~~--~----------------~~v~ii~~D~~~~~ 88 (258)
T PRK14896 29 DGDPVLEIGPGKGALTDELAKR--AKKVYAIELDPRLAEFLRDDEIA--A----------------GNVEIIEGDALKVD 88 (258)
T ss_pred CcCeEEEEeCccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHhcc--C----------------CCEEEEEeccccCC
Confidence 5689999999999999999998 56999999999999999988732 1 47999999998864
Q ss_pred cCCCCceeEEEECCCCCCC
Q 043334 110 RDHDIQLERIVGCIPQILN 128 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~ 128 (903)
.+ .||.|++||||...
T Consensus 89 ~~---~~d~Vv~NlPy~i~ 104 (258)
T PRK14896 89 LP---EFNKVVSNLPYQIS 104 (258)
T ss_pred ch---hceEEEEcCCcccC
Confidence 33 58999999999853
No 450
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.76 E-value=3.5e-07 Score=110.17 Aligned_cols=165 Identities=11% Similarity=0.115 Sum_probs=121.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcc-
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFK- 732 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~- 732 (903)
..+..+..++.||.+.+ .++++|++.++..++.+++.+||.|+++..++-+....+...|+++++++... +.|.
T Consensus 197 i~eAe~~AA~~fgAd~t----yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n~~Gi 271 (714)
T PRK15400 197 HKEAEEYIARVFNADRS----YMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-NAYGI 271 (714)
T ss_pred HHHHHHHHHHHhCCCcE----EEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cccCC
Confidence 35566777788887755 99999999999999999999999999999999999999999999999997654 3332
Q ss_pred ---cC-----HHHHHHHhhcCC----CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCC-ccCCCCC
Q 043334 733 ---MT-----EKTLVTILETVK----KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGL-EFNYEGW 799 (903)
Q Consensus 733 ---ld-----~~~L~~~l~~~~----~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l-~f~~~~~ 799 (903)
++ ++.+++.+.... +..++|++|+ --|.+++ +++|++.|..++ |++||+|... .|.+.-
T Consensus 272 ~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT--YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~~- 343 (714)
T PRK15400 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST--YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIY- 343 (714)
T ss_pred ccCCCccccCHHHHHHHHHhCccccCccEEEEECCC--CccEecC---HHHHHHHhCCCC--EEEEccchhhhccCccc-
Confidence 34 788988886532 1269999996 7899998 667777777777 6789999643 444321
Q ss_pred CCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 800 GGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 800 s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
...+.+.. +.+ +++.++++.|.-|++ +|+.-+
T Consensus 344 ---~~~sam~~--ga~-~~~~i~vtQStHKtL--~alTQa 375 (714)
T PRK15400 344 ---EGKCGMSG--GRV-EGKVIYETQSTHKLL--AAFSQA 375 (714)
T ss_pred ---CCcChhhc--CCC-CCCceEEEEchhhcc--cchhHH
Confidence 10111221 111 124679999999987 465544
No 451
>PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed
Probab=98.76 E-value=2.5e-08 Score=108.76 Aligned_cols=76 Identities=24% Similarity=0.237 Sum_probs=63.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.. .+|+|+|+|++|++.++++... ++++++++|+.+..
T Consensus 42 ~~~~VLEiG~G~G~lt~~L~~~~--~~v~avE~d~~~~~~~~~~~~~-------------------~~v~~i~~D~~~~~ 100 (272)
T PRK00274 42 PGDNVLEIGPGLGALTEPLLERA--AKVTAVEIDRDLAPILAETFAE-------------------DNLTIIEGDALKVD 100 (272)
T ss_pred CcCeEEEeCCCccHHHHHHHHhC--CcEEEEECCHHHHHHHHHhhcc-------------------CceEEEEChhhcCC
Confidence 56899999999999999999984 4999999999999999887621 37999999999875
Q ss_pred cCCCCceeEEEECCCCCC
Q 043334 110 RDHDIQLERIVGCIPQIL 127 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~ 127 (903)
.+.. .+|.||+||||..
T Consensus 101 ~~~~-~~~~vv~NlPY~i 117 (272)
T PRK00274 101 LSEL-QPLKVVANLPYNI 117 (272)
T ss_pred HHHc-CcceEEEeCCccc
Confidence 4321 1599999999984
No 452
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=98.74 E-value=1.5e-07 Score=95.25 Aligned_cols=126 Identities=15% Similarity=0.169 Sum_probs=93.3
Q ss_pred HHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhccc
Q 043334 15 FTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTL 94 (903)
Q Consensus 15 ~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~ 94 (903)
..++.+|... ..+|.++||+.+|||.+++..+.+ +..+++.+|.|..++...++|++..++
T Consensus 31 EalFNil~~~---~i~g~~~LDlFAGSGaLGlEAlSR-GA~~~~~vE~~~~a~~~l~~N~~~l~~--------------- 91 (187)
T COG0742 31 EALFNILAPD---EIEGARVLDLFAGSGALGLEALSR-GAARVVFVEKDRKAVKILKENLKALGL--------------- 91 (187)
T ss_pred HHHHHhcccc---ccCCCEEEEecCCccHhHHHHHhC-CCceEEEEecCHHHHHHHHHHHHHhCC---------------
Confidence 3555666542 246899999999999999997765 477999999999999999999988775
Q ss_pred CCcEEEEEccccccccCCCC--ceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHH
Q 043334 95 LDRVEFHESDLLAYCRDHDI--QLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARA 172 (903)
Q Consensus 95 ~~~v~~~~gDl~~~~~~~~~--~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~ 172 (903)
..++.++.+|.......... .||+|+..|||-.. ....... -.
T Consensus 92 ~~~~~~~~~da~~~L~~~~~~~~FDlVflDPPy~~~----l~~~~~~-------------------------------~~ 136 (187)
T COG0742 92 EGEARVLRNDALRALKQLGTREPFDLVFLDPPYAKG----LLDKELA-------------------------------LL 136 (187)
T ss_pred ccceEEEeecHHHHHHhcCCCCcccEEEeCCCCccc----hhhHHHH-------------------------------HH
Confidence 25899999999866433332 49999999999821 1110000 11
Q ss_pred HHHHhhcccCCcEEEEEeCCCC
Q 043334 173 VEEGIGVIKPSGIMIFNMGGRP 194 (903)
Q Consensus 173 l~~~~~~LkpgG~ll~~~~~~~ 194 (903)
.-.-..+|+|+|.+++++....
T Consensus 137 ~~~~~~~L~~~~~iv~E~~~~~ 158 (187)
T COG0742 137 LLEENGWLKPGALIVVEHDKDV 158 (187)
T ss_pred HHHhcCCcCCCcEEEEEeCCCc
Confidence 2224577999999999988653
No 453
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=98.74 E-value=6.8e-08 Score=101.61 Aligned_cols=115 Identities=11% Similarity=0.113 Sum_probs=79.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchh-hh-cccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDA-EK-KTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~-~~-~~~~~~v~~~~gDl~~ 107 (903)
++.+||+.|||.|..+..||.. |.+|+|+|+|+.+|+.+.+. ++++. .+... .. ..-..+++++++|+++
T Consensus 43 ~~~rvLvPgCGkg~D~~~LA~~--G~~V~GvDlS~~Ai~~~~~e---~~~~~---~~~~~~~~~~~~~~~i~~~~gD~f~ 114 (226)
T PRK13256 43 DSSVCLIPMCGCSIDMLFFLSK--GVKVIGIELSEKAVLSFFSQ---NTINY---EVIHGNDYKLYKGDDIEIYVADIFN 114 (226)
T ss_pred CCCeEEEeCCCChHHHHHHHhC--CCcEEEEecCHHHHHHHHHH---cCCCc---ceecccccceeccCceEEEEccCcC
Confidence 4679999999999999999998 88999999999999998652 22210 00000 00 0113579999999999
Q ss_pred ccc--CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 108 YCR--DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 108 ~~~--~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
+.. ...++||+|+- ......++... -.+..+.+.+.|+|||.
T Consensus 115 l~~~~~~~~~fD~VyD------ra~~~Alpp~~------------------------------R~~Y~~~l~~lL~pgg~ 158 (226)
T PRK13256 115 LPKIANNLPVFDIWYD------RGAYIALPNDL------------------------------RTNYAKMMLEVCSNNTQ 158 (226)
T ss_pred CCccccccCCcCeeee------ehhHhcCCHHH------------------------------HHHHHHHHHHHhCCCcE
Confidence 854 22347999861 12222222222 33779999999999998
Q ss_pred EEE
Q 043334 186 MIF 188 (903)
Q Consensus 186 ll~ 188 (903)
+++
T Consensus 159 lll 161 (226)
T PRK13256 159 ILL 161 (226)
T ss_pred EEE
Confidence 887
No 454
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.74 E-value=9.9e-07 Score=97.20 Aligned_cols=212 Identities=16% Similarity=0.094 Sum_probs=148.1
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc-cC---C---CCC----chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR-QN---M---SES----EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~-y~---~---~~G----~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
.+.|.|=.++|. +++.+++++-..+.. |. + -+| .........+..++.||.+.. ++-..+|+++
T Consensus 26 ~~~ieLIASEN~--~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~a---nVQPhSGs~A 100 (413)
T COG0112 26 REHIELIASENF--TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYA---NVQPHSGSQA 100 (413)
T ss_pred hhceeeeecccc--CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCcc---ccCCCCchHH
Confidence 367888777775 567788887766643 21 1 122 233444556667788999877 7888999998
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHH---HHcC--CEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCC
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAA---RFLK--ANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTIN 758 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~---~~~G--~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~N 758 (903)
.+.. +.++++|||+|+-.+-.++++...- ...| .+++.++++.+ +..+|.|++++...+.+++ ++++.-+.-
T Consensus 101 N~av-~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK-~ii~G~SaY 177 (413)
T COG0112 101 NQAV-YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEVKPK-LIIAGGSAY 177 (413)
T ss_pred HHHH-HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHhCCC-EEEECcccc
Confidence 8875 7889999999998888777765543 1122 47788888864 4679999999998877654 445443312
Q ss_pred CcccCCCHHHHHHHHHHHHhCCcEEEEecCCC-CCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce
Q 043334 759 PTGLLYSNKEIENILTVCAKYGARVVIDTAFS-GLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK 837 (903)
Q Consensus 759 PTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~-~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR 837 (903)
| ..++ ++++.++|.+-|.++++|-++- +|+-.|...+ . ++ ...|+.+|..|++ +|=|
T Consensus 178 ~--r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~------P---~~------~AdvVTtTTHKTl--rGPr 235 (413)
T COG0112 178 S--RPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPN------P---LP------HADVVTTTTHKTL--RGPR 235 (413)
T ss_pred c--cccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCC------C---CC------ccceEeCCcccCC--CCCC
Confidence 2 2344 7777778888899999999883 3444444321 0 11 2468999999998 5889
Q ss_pred eeEEEeCcHHHHHHHHhCC
Q 043334 838 FGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 838 iG~lv~~~~~li~~l~~~~ 856 (903)
-|.|.+.++++.+++.+..
T Consensus 236 GG~Il~~~eel~kkin~aV 254 (413)
T COG0112 236 GGIILTNDEELAKKINSAV 254 (413)
T ss_pred ceEEEeccHHHHHHhhhhc
Confidence 9999999866999998743
No 455
>KOG4300 consensus Predicted methyltransferase [General function prediction only]
Probab=98.74 E-value=3.6e-08 Score=99.19 Aligned_cols=108 Identities=20% Similarity=0.132 Sum_probs=79.6
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEE-EEEcccccccc
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVE-FHESDLLAYCR 110 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~-~~~gDl~~~~~ 110 (903)
..|||+|||||..=... ..-|+.+|+++|.++.|-+.|.+.++.+. ..+++ |+.++..+++.
T Consensus 78 ~~vLEvgcGtG~Nfkfy-~~~p~~svt~lDpn~~mee~~~ks~~E~k----------------~~~~~~fvva~ge~l~~ 140 (252)
T KOG4300|consen 78 GDVLEVGCGTGANFKFY-PWKPINSVTCLDPNEKMEEIADKSAAEKK----------------PLQVERFVVADGENLPQ 140 (252)
T ss_pred cceEEecccCCCCcccc-cCCCCceEEEeCCcHHHHHHHHHHHhhcc----------------CcceEEEEeechhcCcc
Confidence 46899999999764332 22256799999999999999999987664 25677 99999999874
Q ss_pred CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEe
Q 043334 111 DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNM 190 (903)
Q Consensus 111 ~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~ 190 (903)
-.++++|+||+-...+ + ..+ ..+.+++..++|+|||+++|..
T Consensus 141 l~d~s~DtVV~TlvLC--S--------------------------ve~----------~~k~L~e~~rlLRpgG~iifiE 182 (252)
T KOG4300|consen 141 LADGSYDTVVCTLVLC--S--------------------------VED----------PVKQLNEVRRLLRPGGRIIFIE 182 (252)
T ss_pred cccCCeeeEEEEEEEe--c--------------------------cCC----------HHHHHHHHHHhcCCCcEEEEEe
Confidence 4556999998531111 1 111 2278999999999999999965
Q ss_pred CCCC
Q 043334 191 GGRP 194 (903)
Q Consensus 191 ~~~~ 194 (903)
+...
T Consensus 183 Hva~ 186 (252)
T KOG4300|consen 183 HVAG 186 (252)
T ss_pred cccc
Confidence 5443
No 456
>COG2521 Predicted archaeal methyltransferase [General function prediction only]
Probab=98.74 E-value=2.9e-08 Score=101.62 Aligned_cols=136 Identities=18% Similarity=0.207 Sum_probs=104.0
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.+|.+|||-++|-|+.++..+++ ++.+|+-++.||..+++|.-|-...++. ..+++++.||..+.
T Consensus 133 ~~G~rVLDtC~GLGYtAi~a~~r-GA~~VitvEkdp~VLeLa~lNPwSr~l~--------------~~~i~iilGD~~e~ 197 (287)
T COG2521 133 KRGERVLDTCTGLGYTAIEALER-GAIHVITVEKDPNVLELAKLNPWSRELF--------------EIAIKIILGDAYEV 197 (287)
T ss_pred ccCCEeeeeccCccHHHHHHHHc-CCcEEEEEeeCCCeEEeeccCCCCcccc--------------ccccEEecccHHHH
Confidence 47899999999999999998887 2449999999999999999887666552 34689999999887
Q ss_pred ccCC-CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 109 CRDH-DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 109 ~~~~-~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
...- +.+||+||-.||=+.....- | -..|.++.+|+|||||.++
T Consensus 198 V~~~~D~sfDaIiHDPPRfS~AgeL---------------Y--------------------seefY~El~RiLkrgGrlF 242 (287)
T COG2521 198 VKDFDDESFDAIIHDPPRFSLAGEL---------------Y--------------------SEEFYRELYRILKRGGRLF 242 (287)
T ss_pred HhcCCccccceEeeCCCccchhhhH---------------h--------------------HHHHHHHHHHHcCcCCcEE
Confidence 5432 34799999888877432200 0 1278899999999999999
Q ss_pred EEeCCCC-------cHHHHHHHHHHCCCeEEEEE
Q 043334 188 FNMGGRP-------GQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 188 ~~~~~~~-------~~~~l~~ll~~~gf~~~~~~ 214 (903)
-.++... -+.-+.+.|++.||..+...
T Consensus 243 HYvG~Pg~ryrG~d~~~gVa~RLr~vGF~~v~~~ 276 (287)
T COG2521 243 HYVGNPGKRYRGLDLPKGVAERLRRVGFEVVKKV 276 (287)
T ss_pred EEeCCCCcccccCChhHHHHHHHHhcCceeeeee
Confidence 8666422 23344578999999977664
No 457
>KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only]
Probab=98.73 E-value=9.3e-08 Score=97.21 Aligned_cols=128 Identities=12% Similarity=0.161 Sum_probs=88.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
+..-|||||||||..+..+... +...+|+|||+.|++.|.+.-. .-.++.+||-+..
T Consensus 50 ~~~~iLDIGCGsGLSg~vL~~~--Gh~wiGvDiSpsML~~a~~~e~---------------------egdlil~DMG~Gl 106 (270)
T KOG1541|consen 50 KSGLILDIGCGSGLSGSVLSDS--GHQWIGVDISPSMLEQAVEREL---------------------EGDLILCDMGEGL 106 (270)
T ss_pred CCcEEEEeccCCCcchheeccC--CceEEeecCCHHHHHHHHHhhh---------------------hcCeeeeecCCCC
Confidence 5678999999999998888765 6899999999999999986321 1347889998877
Q ss_pred cCCCCceeEEEEC--CCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 110 RDHDIQLERIVGC--IPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 110 ~~~~~~fD~Iv~N--pPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
+...+.||.+|+- .-|.-+.+.. .+....-+.+||...+.+|++|++.+
T Consensus 107 pfrpGtFDg~ISISAvQWLcnA~~s-----------------------------~~~P~~Rl~~FF~tLy~~l~rg~raV 157 (270)
T KOG1541|consen 107 PFRPGTFDGVISISAVQWLCNADKS-----------------------------LHVPKKRLLRFFGTLYSCLKRGARAV 157 (270)
T ss_pred CCCCCccceEEEeeeeeeecccCcc-----------------------------ccChHHHHHHHhhhhhhhhccCceeE
Confidence 7667799988741 2222111111 11222234588999999999999999
Q ss_pred EEeCCCCcH--HHHHHHHHHCCCe
Q 043334 188 FNMGGRPGQ--GVCKRLFERRGFR 209 (903)
Q Consensus 188 ~~~~~~~~~--~~l~~ll~~~gf~ 209 (903)
+..-..... +.+..-...+||.
T Consensus 158 ~QfYpen~~q~d~i~~~a~~aGF~ 181 (270)
T KOG1541|consen 158 LQFYPENEAQIDMIMQQAMKAGFG 181 (270)
T ss_pred EEecccchHHHHHHHHHHHhhccC
Confidence 976544322 2333444556764
No 458
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.72 E-value=6.8e-07 Score=101.41 Aligned_cols=191 Identities=10% Similarity=0.098 Sum_probs=124.9
Q ss_pred CCCcHHHHHHHHHHHHccC-CCC-----C-----chHHHHHHHHHHHhhcCCCCCCCCcEEecCc-hHHHHHHHHHHhcc
Q 043334 627 LPIPSLVKAAIFESFARQN-MSE-----S-----EIDVTPSIQQYIKSNFGFPIDINAEFIYADC-SQSLFNKLVLCCIL 694 (903)
Q Consensus 627 ~~~p~~v~~al~~al~~y~-~~~-----G-----~~~lr~ala~~l~~~~G~~~~pe~~I~vt~G-s~~al~~ll~~l~~ 694 (903)
.+.|+.+++++.+.+..++ ..+ + ..+..+.+++.+++.+|.+. ++ +|++|+| ++++++.++..++.
T Consensus 8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~-~~-~vvf~~gs~T~a~~~~~~~l~~ 85 (355)
T cd00611 8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPD-NY-KVLFLQGGATGQFAAVPLNLLG 85 (355)
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-Cc-eEEEEcCCchHHHHHHHHhcCC
Confidence 3578899999988875432 111 1 12455677888888888743 23 7999988 99999999999987
Q ss_pred ---CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccC-HHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 695 ---EGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMT-EKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 695 ---pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld-~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
+||.|++ .|........++..|++++.++.+...++ .+ ++..+..+++++ ++|.+++-. |.||..++
T Consensus 86 ~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~-~lV~~~h~~-t~tG~~~~----- 156 (355)
T cd00611 86 DKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDA-AYVHYCSNE-TIHGVEFD----- 156 (355)
T ss_pred CCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCC-CEEEEeCCc-ccccEEcc-----
Confidence 5555544 33222334477888999999988643223 13 233333345555 588888887 99999743
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
++++.+|+++++|-+-+ ++..+. + ++.. . +.+.|--|.+|.+| +|+++++++ +.+
T Consensus 157 ---~i~~~~g~~~~VDa~qs---~g~~~i---d-------v~~~-----~-~~~ss~~K~lGP~G--~g~l~~~~~-~~~ 211 (355)
T cd00611 157 ---EVPDTGGVPLVADMSSN---ILSRPI---D-------VSKF-----G-VIYAGAQKNLGPAG--VTVVIVRKD-LLG 211 (355)
T ss_pred ---eecccCCCeEEEEcccc---ccCCCC---C-------HHHh-----C-EEEeecccccCCCc--eEEEEECHH-HHh
Confidence 34456999999999863 222221 1 1111 2 45566789999777 799999887 665
Q ss_pred HHH
Q 043334 851 AFS 853 (903)
Q Consensus 851 ~l~ 853 (903)
++.
T Consensus 212 ~~~ 214 (355)
T cd00611 212 KAR 214 (355)
T ss_pred hcc
Confidence 544
No 459
>PF09445 Methyltransf_15: RNA cap guanine-N2 methyltransferase; InterPro: IPR019012 RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe (Fission yeast) trimethylguanosine synthase (Tgs1) and Giardia lamblia (Giardia intestinalis) Tgs2, catalyse the methylation step(s) for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure [, , ]. Trimethylguanosine synthase is specific for guanine, and N7 methylation must precede N2 methylation. This enzyme is required for pre-mRNA splicing, pre-rRNA processing and small ribosomal subunit synthesis. As such, this enzyme plays a role in transcriptional regulation. ; GO: 0008168 methyltransferase activity, 0001510 RNA methylation, 0009452 RNA capping; PDB: 3EGI_B 3GDH_A.
Probab=98.72 E-value=2.7e-08 Score=98.99 Aligned_cols=79 Identities=22% Similarity=0.274 Sum_probs=59.9
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccC
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD 111 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~ 111 (903)
..|+|+.||.|..++.+|+. ..+|+++|+|+..++.|+.|+...|. .++++++++|+.+....
T Consensus 1 ~~vlD~fcG~GGNtIqFA~~--~~~Viaidid~~~~~~a~hNa~vYGv---------------~~~I~~i~gD~~~~~~~ 63 (163)
T PF09445_consen 1 TTVLDAFCGVGGNTIQFART--FDRVIAIDIDPERLECAKHNAEVYGV---------------ADNIDFICGDFFELLKR 63 (163)
T ss_dssp SEEEETT-TTSHHHHHHHHT--T-EEEEEES-HHHHHHHHHHHHHTT----------------GGGEEEEES-HHHHGGG
T ss_pred CEEEEeccCcCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCC---------------CCcEEEEeCCHHHHHhh
Confidence 36999999999999999998 46899999999999999999999887 36899999999988644
Q ss_pred CC-Cc-eeEEEECCCCCC
Q 043334 112 HD-IQ-LERIVGCIPQIL 127 (903)
Q Consensus 112 ~~-~~-fD~Iv~NpPy~~ 127 (903)
.. .. +|+|+.+|||--
T Consensus 64 ~~~~~~~D~vFlSPPWGG 81 (163)
T PF09445_consen 64 LKSNKIFDVVFLSPPWGG 81 (163)
T ss_dssp B------SEEEE---BSS
T ss_pred ccccccccEEEECCCCCC
Confidence 31 12 899999999983
No 460
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.72 E-value=3.3e-06 Score=98.51 Aligned_cols=245 Identities=9% Similarity=0.053 Sum_probs=146.0
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCC--C-chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSE--S-EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~--G-~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..|. ..++ ..+.+.+++.+.+.+..... + ..+....+++.+.+..+... .+ .++++++++++
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-~~-~v~f~~SGsEA 127 (441)
T PRK05769 50 DVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGF-EK-KVFFTNSGTES 127 (441)
T ss_pred eCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCC-CC-EEEECCchHHH
Confidence 35677899987663 3344 46778888888876532211 1 24556778888877543211 12 79999999998
Q ss_pred HHHHHHHhcc-CC-CeEEEcCCCcHHHHHH-HHHcCC-------------EEEEecCCCC--CCcc-c--------CHHH
Q 043334 685 FNKLVLCCIL-EG-GTLCFPAGSNGNYVSA-ARFLKA-------------NIVNIPTESE--VGFK-M--------TEKT 737 (903)
Q Consensus 685 l~~ll~~l~~-pG-D~Vlv~~P~y~~~~~~-~~~~G~-------------~vv~v~~~~~--~~f~-l--------d~~~ 737 (903)
...++..... .| .+|+...-+|-+.... ....|. .+..++.... ..|+ - +.+.
T Consensus 128 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (441)
T PRK05769 128 NEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDF 207 (441)
T ss_pred HHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHH
Confidence 8877764321 23 4677767666554332 222221 1222322110 0011 0 1233
Q ss_pred HHH-Hhh----cCCCcEEEEECCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhh
Q 043334 738 LVT-ILE----TVKKPWVYISGPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL 811 (903)
Q Consensus 738 L~~-~l~----~~~~~~vil~~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l 811 (903)
+++ .++ ... .+.++.-|-+.-.|.. .+.+.+++|.++|++||+++|.||++.++...+... . ...+
T Consensus 208 le~~~~~~~~~~~~-iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~---a----~~~~ 279 (441)
T PRK05769 208 IEDYLFKKLVPPEE-VAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF---A----IEHF 279 (441)
T ss_pred HHHHHHhhccCCCc-eEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee---h----hhcc
Confidence 555 222 223 3566666764555664 467889999999999999999999998754444321 1 1111
Q ss_pred ccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC-CCCCcHHHHHHHHHHHh
Q 043334 812 YSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG-LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 812 ~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~-~~~~s~~~Q~aa~~~L~ 874 (903)
.-.| | ++ +|||.++ .|+++|+++++++ +.+.+..... +.+.+++++.++.+.|+
T Consensus 280 gv~p---D-iv---t~~K~l~-~G~p~gav~~~~~-i~~~~~~~~~~T~~g~p~~~aaa~a~L~ 334 (441)
T PRK05769 280 GVEP---D-II---TLAKAIA-GGLPLGAVIGRAE-LMFLPPGSHANTFGGNPVAAAAALATLE 334 (441)
T ss_pred CCCC---C-EE---EEccccc-CCcccEEEEEehh-hhhcCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 1112 1 22 5899998 7899999999877 7654332222 55667888888888884
No 461
>TIGR02081 metW methionine biosynthesis protein MetW. This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized.
Probab=98.72 E-value=9.9e-08 Score=98.78 Aligned_cols=75 Identities=17% Similarity=0.264 Sum_probs=57.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.. +.+++|+|+++++++.++++ +++++++|+.+..
T Consensus 13 ~~~~iLDiGcG~G~~~~~l~~~~-~~~~~giD~s~~~i~~a~~~-----------------------~~~~~~~d~~~~l 68 (194)
T TIGR02081 13 PGSRVLDLGCGDGELLALLRDEK-QVRGYGIEIDQDGVLACVAR-----------------------GVNVIQGDLDEGL 68 (194)
T ss_pred CCCEEEEeCCCCCHHHHHHHhcc-CCcEEEEeCCHHHHHHHHHc-----------------------CCeEEEEEhhhcc
Confidence 56799999999999999988753 56899999999999988632 3667888886532
Q ss_pred -cCCCCceeEEEECCCCCCC
Q 043334 110 -RDHDIQLERIVGCIPQILN 128 (903)
Q Consensus 110 -~~~~~~fD~Iv~NpPy~~~ 128 (903)
....++||+|++|.++...
T Consensus 69 ~~~~~~sfD~Vi~~~~l~~~ 88 (194)
T TIGR02081 69 EAFPDKSFDYVILSQTLQAT 88 (194)
T ss_pred cccCCCCcCEEEEhhHhHcC
Confidence 1223489999988665433
No 462
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional
Probab=98.72 E-value=1.2e-07 Score=116.50 Aligned_cols=83 Identities=23% Similarity=0.292 Sum_probs=69.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC------------------------------------------CCEEEEEeCCHHHH
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL------------------------------------------PSKVYGLDINPRAI 67 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~------------------------------------------~~~V~giDis~~al 67 (903)
++..++|.+||+|.+.+..|.... ..+++|+|+++.|+
T Consensus 190 ~~~~l~DP~CGSGTilIEAa~~~~~~~pg~~r~~f~f~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~i~G~Did~~av 269 (702)
T PRK11783 190 EGTPLLDPMCGSGTLLIEAAMMAADIAPGLHRERWGFSGWLGHDEALWQELLEEAQERARAGLAELPSKFYGSDIDPRVI 269 (702)
T ss_pred CCCeEEccCCCccHHHHHHHHHHhcCCCCccccccccccCCCCCHHHHHHHHHHHHHHHhhcccccCceEEEEECCHHHH
Confidence 568999999999999999876411 13699999999999
Q ss_pred HHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCC-CCceeEEEECCCCCC
Q 043334 68 RISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDH-DIQLERIVGCIPQIL 127 (903)
Q Consensus 68 ~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~-~~~fD~Iv~NpPy~~ 127 (903)
+.|++|+..+|++ +++++.++|+.+..... .++||+||+||||..
T Consensus 270 ~~A~~N~~~~g~~---------------~~i~~~~~D~~~~~~~~~~~~~d~IvtNPPYg~ 315 (702)
T PRK11783 270 QAARKNARRAGVA---------------ELITFEVKDVADLKNPLPKGPTGLVISNPPYGE 315 (702)
T ss_pred HHHHHHHHHcCCC---------------cceEEEeCChhhcccccccCCCCEEEECCCCcC
Confidence 9999999999883 57999999998875432 236999999999985
No 463
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair]
Probab=98.71 E-value=1.2e-07 Score=105.31 Aligned_cols=118 Identities=19% Similarity=0.156 Sum_probs=91.6
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCC--------------------------------C-------EEEEEeCCHHHHH
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLP--------------------------------S-------KVYGLDINPRAIR 68 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~--------------------------------~-------~V~giDis~~al~ 68 (903)
+.++..++|.-||+|.+.+..|...++ + .++|+|+|+.+++
T Consensus 189 w~~~~pl~DPmCGSGTi~IEAAl~~~niAPg~~R~~~f~~w~~~~~~lw~~~~~ea~~~a~~~~~~~~~~G~Did~r~i~ 268 (381)
T COG0116 189 WKPDEPLLDPMCGSGTILIEAALIAANIAPGLNRRFGFEFWDWFDKDLWDKLREEAEERARRGKELPIIYGSDIDPRHIE 268 (381)
T ss_pred CCCCCccccCCCCccHHHHHHHHhccccCCccccccchhhhhhccHHHHHHHHHHHHHHHhhcCccceEEEecCCHHHHH
Confidence 345679999999999999998887531 1 3789999999999
Q ss_pred HHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhh
Q 043334 69 ISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLY 148 (903)
Q Consensus 69 ~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~ 148 (903)
.|+.|+...|+ .+.|+|.++|+..+..+. ..+|+|||||||-..-..
T Consensus 269 ~Ak~NA~~AGv---------------~d~I~f~~~d~~~l~~~~-~~~gvvI~NPPYGeRlg~----------------- 315 (381)
T COG0116 269 GAKANARAAGV---------------GDLIEFKQADATDLKEPL-EEYGVVISNPPYGERLGS----------------- 315 (381)
T ss_pred HHHHHHHhcCC---------------CceEEEEEcchhhCCCCC-CcCCEEEeCCCcchhcCC-----------------
Confidence 99999999988 378999999999886663 389999999999832110
Q ss_pred hccccccccccccccccH-HHHHHHHHHHhhcccCCcEEEEEeCC
Q 043334 149 SLSNYCALQGFVEDQFGL-GLIARAVEEGIGVIKPSGIMIFNMGG 192 (903)
Q Consensus 149 ~l~~~~al~~~v~~~~g~-~~~~~~l~~~~~~LkpgG~ll~~~~~ 192 (903)
.... .+|..+.+.+.+.++.-+..+|....
T Consensus 316 --------------~~~v~~LY~~fg~~lk~~~~~ws~~v~tt~e 346 (381)
T COG0116 316 --------------EALVAKLYREFGRTLKRLLAGWSRYVFTTSE 346 (381)
T ss_pred --------------hhhHHHHHHHHHHHHHHHhcCCceEEEEccH
Confidence 0111 25667788888888877887776543
No 464
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.69 E-value=6.7e-07 Score=97.82 Aligned_cols=185 Identities=11% Similarity=0.074 Sum_probs=116.5
Q ss_pred CCCchHH-HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEE-cCCCcHHHHHHH----------H
Q 043334 647 SESEIDV-TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCF-PAGSNGNYVSAA----------R 714 (903)
Q Consensus 647 ~~G~~~l-r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv-~~P~y~~~~~~~----------~ 714 (903)
.+|+.+. |+.+.+-+++.+|.+..-= +.-+ ..++++|..++..++.|||+++. ...=|......+ +
T Consensus 48 GYGY~D~GRd~le~iyA~vfgaE~ALV-Rpq~-vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~ 125 (403)
T PF06838_consen 48 GYGYDDIGRDKLERIYADVFGAEDALV-RPQF-VSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLK 125 (403)
T ss_dssp TT-TT-HHHHHHHHHHHHHCT-SEEEE-ETTS--SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTG
T ss_pred cCCCCCccHHHHHHHHHHHhCchhhhh-cccc-cchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChH
Confidence 4666665 9999999999999863200 1112 25578899999999999999884 444466666555 5
Q ss_pred HcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHh--CCcEEEEecCCCCC
Q 043334 715 FLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAK--YGARVVIDTAFSGL 792 (903)
Q Consensus 715 ~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k--~~i~VI~DeaY~~l 792 (903)
-+|.+...+++.+++ .+|.+.+++++++++ ++|+|--..---+=..++.+++++++++.++ .++++.+|++|.++
T Consensus 126 e~Gi~Y~~v~L~~dg--~~D~~~i~~~~~~~t-k~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEF 202 (403)
T PF06838_consen 126 EFGIKYREVPLTEDG--TIDWEAIKKALKPNT-KMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEF 202 (403)
T ss_dssp GGT-EEEE--B-TTS--SB-HHHHHHHHHTTE-EEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTT
T ss_pred HhCceeEEEeecCCC--CcCHHHHHHhhccCc-eEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCccee
Confidence 568899999998644 599999999999877 4777754431122234677899999999886 48999999999876
Q ss_pred ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce--eeEEEeCcHHHHHHHHhC
Q 043334 793 EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK--FGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 793 ~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR--iG~lv~~~~~li~~l~~~ 855 (903)
+=..++. +. +-.++.+||=|.-| .|+= -||+++..+ +++.....
T Consensus 203 vE~~EP~-------------~v----GADl~aGSLIKNpG-GgiAptGGYIaGr~~-lVe~~a~R 248 (403)
T PF06838_consen 203 VETQEPT-------------EV----GADLMAGSLIKNPG-GGIAPTGGYIAGRKD-LVERAAYR 248 (403)
T ss_dssp TSSS-GG-------------GG----T-SEEEEETTSGGG-TTT-SS-EEEEESHH-HHHHHHHH
T ss_pred ccccCcc-------------cc----chhheeccceeCCC-CCccCcCCEEechHH-HHHHHHhh
Confidence 6444331 11 25789999999987 3332 279999987 99877653
No 465
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=98.69 E-value=9.9e-08 Score=101.97 Aligned_cols=104 Identities=16% Similarity=0.231 Sum_probs=84.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
+.++|||+||++|+-++.+|...+ +.+|+.+|.+++..+.|++++...|+ .++++++.||..+.
T Consensus 79 ~ak~iLEiGT~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~---------------~~~I~~~~G~a~e~ 143 (247)
T PLN02589 79 NAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGV---------------AHKIDFREGPALPV 143 (247)
T ss_pred CCCEEEEEeChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC---------------CCceEEEeccHHHH
Confidence 357999999999999999998764 56999999999999999999998887 37899999999886
Q ss_pred ccCC------CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccC
Q 043334 109 CRDH------DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKP 182 (903)
Q Consensus 109 ~~~~------~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkp 182 (903)
.... .++||+|+ +..+ ...|...++.+.+.|+|
T Consensus 144 L~~l~~~~~~~~~fD~iF-----iDad------------------------------------K~~Y~~y~~~~l~ll~~ 182 (247)
T PLN02589 144 LDQMIEDGKYHGTFDFIF-----VDAD------------------------------------KDNYINYHKRLIDLVKV 182 (247)
T ss_pred HHHHHhccccCCcccEEE-----ecCC------------------------------------HHHhHHHHHHHHHhcCC
Confidence 4331 24899998 2111 11234678888999999
Q ss_pred CcEEEEE
Q 043334 183 SGIMIFN 189 (903)
Q Consensus 183 gG~ll~~ 189 (903)
||.++++
T Consensus 183 GGviv~D 189 (247)
T PLN02589 183 GGVIGYD 189 (247)
T ss_pred CeEEEEc
Confidence 9999984
No 466
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.69 E-value=4.7e-06 Score=97.03 Aligned_cols=245 Identities=11% Similarity=0.052 Sum_probs=147.7
Q ss_pred cCCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCCC--CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 611 ETPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNMS--ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 611 ~~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~~--~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
...|...+|+..| ...++ .+|.+.+++.+.+.+.... +-..+.+..+++.+.+......+ .++++++++++.
T Consensus 71 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~---~v~f~~SGsEA~ 147 (442)
T TIGR03372 71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLK---YSFFCNSGTESV 147 (442)
T ss_pred ECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcC---EEEEeCCchHHH
Confidence 3567888998766 44455 5678888888887653321 22345566777777765432222 788999999988
Q ss_pred HHHHHHhcc----CC-CeEEEcCCCcHHHHHHHHHc-CCEEE---EecCCCCCC--cccCHHHHHHHhhc----CCCcEE
Q 043334 686 NKLVLCCIL----EG-GTLCFPAGSNGNYVSAARFL-KANIV---NIPTESEVG--FKMTEKTLVTILET----VKKPWV 750 (903)
Q Consensus 686 ~~ll~~l~~----pG-D~Vlv~~P~y~~~~~~~~~~-G~~vv---~v~~~~~~~--f~ld~~~L~~~l~~----~~~~~v 750 (903)
..++..... .| ..|+....+|-+....+... |-... ..|+.+.-. -..|.+.+++.++. ....+.
T Consensus 148 e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAa 227 (442)
T TIGR03372 148 EAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAA 227 (442)
T ss_pred HHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEE
Confidence 877764422 23 46777777766543333222 21100 111111000 01356777666642 122355
Q ss_pred EEECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 751 YISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 751 il~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
+|.-|-+.--|... +.+.++++.++|++||+++|.||+..++-=.|.. |. .....-.| .|+ +|+|
T Consensus 228 vIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~---~a----~e~~gv~P-----Div--t~gK 293 (442)
T TIGR03372 228 IILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM---FA----CEHEGVQP-----DIL--CLAK 293 (442)
T ss_pred EEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc---hh----hhhcCCCC-----Cee--eehh
Confidence 56666645556655 6888999999999999999999999653212221 11 11122222 222 4899
Q ss_pred hccccc-ceeeEEEeCcHHHHHHHHhC----CCCCCCcHHHHHHHHHHHh
Q 043334 830 KMLTGA-LKFGFLVLNHPQLVDAFSSF----PGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 830 ~~g~~G-lRiG~lv~~~~~li~~l~~~----~~~~~~s~~~Q~aa~~~L~ 874 (903)
.+| .| +.+|.+++.++ +.+.+..- ..+.+.++.+-.++.+.|+
T Consensus 294 ~lg-~G~~Pigavv~~~~-i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~ 341 (442)
T TIGR03372 294 ALG-GGVMPIGATIATEA-VFSVLFDNPFLHTTTFGGNPLACAAALATIN 341 (442)
T ss_pred hhc-CCcccceEEEecHH-HHHhhhccCccccCCCCCCHHHHHHHHHHHH
Confidence 997 67 68999998876 88887422 1255567777777777774
No 467
>PLN02271 serine hydroxymethyltransferase
Probab=98.68 E-value=2.8e-06 Score=99.11 Aligned_cols=205 Identities=10% Similarity=0.060 Sum_probs=130.0
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc-cCC------CCC----chHHHHHHHHHHHhhcCCCCCC-CCcEEecCchH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR-QNM------SES----EIDVTPSIQQYIKSNFGFPIDI-NAEFIYADCSQ 682 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~-y~~------~~G----~~~lr~ala~~l~~~~G~~~~p-e~~I~vt~Gs~ 682 (903)
...|+|=.++|. +++.+++++...+.. |.. .+| ..++.....+...+.||.++.. .-+|-.-+|+.
T Consensus 148 ~~~l~LIASEN~--~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~ 225 (586)
T PLN02271 148 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTS 225 (586)
T ss_pred hcCeeecccccc--CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHH
Confidence 456777777765 467777776665543 221 112 2233344455566667866520 01577777777
Q ss_pred HHHHHHHHHhccCCCeEEEcCCCcHHHHHHH---------HHcCC--EEEEecCCCCCCcccCHHHHHHHhhcCCCcEEE
Q 043334 683 SLFNKLVLCCILEGGTLCFPAGSNGNYVSAA---------RFLKA--NIVNIPTESEVGFKMTEKTLVTILETVKKPWVY 751 (903)
Q Consensus 683 ~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~---------~~~G~--~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vi 751 (903)
+.+. ++.++++|||+|+..+..++++.... ...|. ++++++++++ +..+|.+++++......+++|+
T Consensus 226 AN~a-V~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~rPKLII 303 (586)
T PLN02271 226 ANFA-VYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDFRPKILI 303 (586)
T ss_pred HHHH-HHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhcCCeEEE
Confidence 6665 57888999999999888887765543 33454 4555556543 4569999999854433334666
Q ss_pred EECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 752 ISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 752 l~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
+..-. || ..++ ++++.++|+++|+++++|-++..-...+..++ . -++ ...++.+|..|++
T Consensus 304 ~g~Sa-yp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~-----s---P~~------~aDvvt~TTHKtL 363 (586)
T PLN02271 304 CGGSS-YP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECV-----N---PFD------YCDIVTSTTHKSL 363 (586)
T ss_pred ECchh-cc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCC-----C---CCc------CCcEEEeCCcccC
Confidence 65555 88 5566 67778888999999999999853222221110 0 011 2468999999988
Q ss_pred ccccceeeEEEeCc
Q 043334 832 LTGALKFGFLVLNH 845 (903)
Q Consensus 832 g~~GlRiG~lv~~~ 845 (903)
.|=|-|.+...+
T Consensus 364 --rGPrGG~I~~r~ 375 (586)
T PLN02271 364 --RGPRGGIIFYRK 375 (586)
T ss_pred --CCCCceEEEecc
Confidence 466779888864
No 468
>KOG2361 consensus Predicted methyltransferase [General function prediction only]
Probab=98.68 E-value=4.6e-08 Score=100.99 Aligned_cols=127 Identities=22% Similarity=0.314 Sum_probs=90.2
Q ss_pred ccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHHHHhcccccCCCC
Q 043334 8 FIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLP--SKVYGLDINPRAIRISWINLYLNALDEKGQP 85 (903)
Q Consensus 8 fiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~--~~V~giDis~~al~~A~~n~~~~gl~~~~~~ 85 (903)
|--|.|...=+..|....+.. ..+||++|||.|.....+.+..++ .+|+++|.||.+++..+++...+
T Consensus 51 fkdR~wL~~Efpel~~~~~~~--~~~ilEvGCGvGNtvfPll~~~~n~~l~v~acDfsp~Ai~~vk~~~~~~-------- 120 (264)
T KOG2361|consen 51 FKDRNWLLREFPELLPVDEKS--AETILEVGCGVGNTVFPLLKTSPNNRLKVYACDFSPRAIELVKKSSGYD-------- 120 (264)
T ss_pred cchhHHHHHhhHHhhCccccC--hhhheeeccCCCcccchhhhcCCCCCeEEEEcCCChHHHHHHHhccccc--------
Confidence 444688887666666655421 228999999999999999888776 79999999999999999886433
Q ss_pred cchhhhcccCCcEEEEEcccccccc---CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccc
Q 043334 86 IYDAEKKTLLDRVEFHESDLLAYCR---DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVED 162 (903)
Q Consensus 86 ~~~~~~~~~~~~v~~~~gDl~~~~~---~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~ 162 (903)
..++...+.|+..... ...+++|.|+.- |... +
T Consensus 121 ---------e~~~~afv~Dlt~~~~~~~~~~~svD~it~I--FvLS-----------A---------------------- 156 (264)
T KOG2361|consen 121 ---------ESRVEAFVWDLTSPSLKEPPEEGSVDIITLI--FVLS-----------A---------------------- 156 (264)
T ss_pred ---------hhhhcccceeccchhccCCCCcCccceEEEE--EEEe-----------c----------------------
Confidence 2467777777765531 123589988631 1100 0
Q ss_pred cccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 163 QFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 163 ~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
-+.+-..+.++.+.++|||||.++|.
T Consensus 157 -i~pek~~~a~~nl~~llKPGG~llfr 182 (264)
T KOG2361|consen 157 -IHPEKMQSVIKNLRTLLKPGGSLLFR 182 (264)
T ss_pred -cChHHHHHHHHHHHHHhCCCcEEEEe
Confidence 11223458899999999999999993
No 469
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.68 E-value=1.5e-06 Score=104.67 Aligned_cols=189 Identities=12% Similarity=0.131 Sum_probs=128.2
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcc-
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFK- 732 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~- 732 (903)
.....+..++.||.+.+ .++++|++.++..++.+++.|||.|+++..++-+....+...|+++++++... +.|.
T Consensus 197 i~eAe~~aA~~fgAd~t----yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~~Gi 271 (713)
T PRK15399 197 HLEAEEYIARTFGAEQS----YIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NALGI 271 (713)
T ss_pred HHHHHHHHHHHhCCCcE----EEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cccCC
Confidence 44566777788888655 99999999999999999999999999999999999999999999999997653 2332
Q ss_pred ---cCH-----HHHHHHhhcCC----CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEE-EEecCCCC-CccCCCC
Q 043334 733 ---MTE-----KTLVTILETVK----KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARV-VIDTAFSG-LEFNYEG 798 (903)
Q Consensus 733 ---ld~-----~~L~~~l~~~~----~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~V-I~DeaY~~-l~f~~~~ 798 (903)
+++ +.+++.+.+.. ++.+++++|+ --|.+++ +++|++.| |+.+ ++||+|.. +.|.+..
T Consensus 272 ~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT--YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p~~ 343 (713)
T PRK15399 272 LGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST--YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHPIY 343 (713)
T ss_pred cCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC--CCceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCccc
Confidence 344 88888886532 2489999996 8899999 55566666 4555 69999964 2344311
Q ss_pred CCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee-EEEeCc----HHHHHHHHhCCCCCCCcHHH
Q 043334 799 WGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVLNH----PQLVDAFSSFPGLSKPHSTV 865 (903)
Q Consensus 799 ~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~~~----~~li~~l~~~~~~~~~s~~~ 865 (903)
...+.+...++. +-.++++.|.-|++ +|+.-+ ++.... +.+.+++. +.++++|+.+.
T Consensus 344 ----~~~sam~~~~~a---D~~i~~tQStHKtL--~alTQaS~iHvk~~vd~~~~n~a~~-m~~STSPsY~L 405 (713)
T PRK15399 344 ----QGKSGMSGERVP---GKVIFETQSTHKML--AAFSQASLIHIKGEYDEETFNEAFM-MHTSTSPSYPI 405 (713)
T ss_pred ----CCcChhhCCCCC---Ceeeeeeeehhccc--cccchheeeeecCCCCHHHHHHHHH-HHcCCCcHHHH
Confidence 100112211111 12456799999987 566655 555533 21333333 33355555544
No 470
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.67 E-value=2.2e-06 Score=97.04 Aligned_cols=187 Identities=12% Similarity=0.114 Sum_probs=130.3
Q ss_pred CcHHHHHHHHHHHHccCC--------CCCch---HHHHHHHHHHHhhcCCCCCCCCcEEecCc-hHHHHHHHHHHhccCC
Q 043334 629 IPSLVKAAIFESFARQNM--------SESEI---DVTPSIQQYIKSNFGFPIDINAEFIYADC-SQSLFNKLVLCCILEG 696 (903)
Q Consensus 629 ~p~~v~~al~~al~~y~~--------~~G~~---~lr~ala~~l~~~~G~~~~pe~~I~vt~G-s~~al~~ll~~l~~pG 696 (903)
.|..+++++.+.+..+.. ..-.+ ++.+.+.+.+++.++.+.+ .+|++++| ++.++..++..++.+|
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~--~~v~~~~gsgT~a~ea~~~nl~~~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDN--YEVLFLQGGATGQFAAVPLNLLAEG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC--ceEEEEcCCchHHHHHHHHhcCCCC
Confidence 577888888888765431 11123 5567788888888886433 26888877 9999999999999999
Q ss_pred CeEEEcCCCcHH--HHHHHHHcCCEEEEecCCCCCCc--ccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 697 GTLCFPAGSNGN--YVSAARFLKANIVNIPTESEVGF--KMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 697 D~Vlv~~P~y~~--~~~~~~~~G~~vv~v~~~~~~~f--~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
|++++..-+..+ +...++..|+ +..+..++..+| .++++.++ ++++. ++|.+++-. |.||...+
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~v~~th~E-TstGv~~~------- 148 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDA-AYVHYCANE-TIHGVEFR------- 148 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCC-CEEEEcCCC-CcccEecc-------
Confidence 998877766554 4567788898 777775422212 24556555 23333 588888887 99999875
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
++++.+++++|+|-+-+ +.+.+. + +++. + +++.|--|.+|.|| +|+++++++ +++++
T Consensus 149 -~l~~~~~~l~iVDavss---~g~~~i---d-------~~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~-~~~~~ 205 (349)
T TIGR01364 149 -ELPDVKNAPLVADMSSN---ILSRPI---D-------VSKF----G--LIYAGAQKNIGPAG--LTVVIVRKD-LLGRA 205 (349)
T ss_pred -eecccCCCeEEEEcccc---ccCccC---C-------HHHc----c--EEEEecccccCCCc--eEEEEECHH-HHhhc
Confidence 55667899999999763 222221 1 1121 2 78899999999888 799999987 66554
No 471
>COG2520 Predicted methyltransferase [General function prediction only]
Probab=98.66 E-value=1.7e-07 Score=103.61 Aligned_cols=124 Identities=26% Similarity=0.324 Sum_probs=96.0
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..+|.+|+|+.||.|.+++.+|+.. ..+|+++|+||.+++..++|+++|+++ +++..++||..+
T Consensus 186 v~~GE~V~DmFAGVGpfsi~~Ak~g-~~~V~A~diNP~A~~~L~eNi~LN~v~---------------~~v~~i~gD~re 249 (341)
T COG2520 186 VKEGETVLDMFAGVGPFSIPIAKKG-RPKVYAIDINPDAVEYLKENIRLNKVE---------------GRVEPILGDARE 249 (341)
T ss_pred hcCCCEEEEccCCcccchhhhhhcC-CceEEEEecCHHHHHHHHHHHHhcCcc---------------ceeeEEeccHHH
Confidence 3469999999999999999999874 334999999999999999999999983 569999999999
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.+... +.+|-|+.|.|... + .++..+.+.+++||++.
T Consensus 250 v~~~~-~~aDrIim~~p~~a-----------~-------------------------------~fl~~A~~~~k~~g~iH 286 (341)
T COG2520 250 VAPEL-GVADRIIMGLPKSA-----------H-------------------------------EFLPLALELLKDGGIIH 286 (341)
T ss_pred hhhcc-ccCCEEEeCCCCcc-----------h-------------------------------hhHHHHHHHhhcCcEEE
Confidence 87663 38999998765531 0 56778888899999988
Q ss_pred EEeCCCCc------HHHHHHHHHHCCCeE
Q 043334 188 FNMGGRPG------QGVCKRLFERRGFRV 210 (903)
Q Consensus 188 ~~~~~~~~------~~~l~~ll~~~gf~~ 210 (903)
+....... ...++......|++.
T Consensus 287 yy~~~~e~~~~~~~~~~i~~~~~~~~~~~ 315 (341)
T COG2520 287 YYEFVPEDDIEERPEKRIKSAARKGGYKV 315 (341)
T ss_pred EEeccchhhcccchHHHHHHHHhhccCcc
Confidence 84443222 244455566666533
No 472
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.65 E-value=6.2e-06 Score=96.81 Aligned_cols=265 Identities=11% Similarity=0.080 Sum_probs=158.2
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
...|...||+..|. ..++ .++.+.+++.+.+.+........+....+++.+.+.... . + .+.++++++++...
T Consensus 95 D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~-~--~-~v~f~~SGsEA~e~ 170 (474)
T PLN02482 95 DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPS-V--E-MVRFVNSGTEACMG 170 (474)
T ss_pred ECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCC-C--C-EEEEeCChHHHHHH
Confidence 45678889986554 3333 567899999888876433222345566777877775432 2 3 79999999998887
Q ss_pred HHHHhcc-CC-CeEEEcCCCcHHHHHH-HHHc--CCEEE------EecCCC-C----CCcccCHHHHHHHhhcC-CCcEE
Q 043334 688 LVLCCIL-EG-GTLCFPAGSNGNYVSA-ARFL--KANIV------NIPTES-E----VGFKMTEKTLVTILETV-KKPWV 750 (903)
Q Consensus 688 ll~~l~~-pG-D~Vlv~~P~y~~~~~~-~~~~--G~~vv------~v~~~~-~----~~f~ld~~~L~~~l~~~-~~~~v 750 (903)
++..... .| .+|+...-+|-+.... .... |.... .+|... . -.| -|++.+++.+... ...+.
T Consensus 171 AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~~iAa 249 (474)
T PLN02482 171 VLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKGEIAA 249 (474)
T ss_pred HHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCCceEE
Confidence 7765421 23 4677766666553321 1111 10000 000000 0 011 1688888887642 22356
Q ss_pred EEECCCCCCcccCCC-HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 751 YISGPTINPTGLLYS-NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 751 il~~P~~NPTG~v~s-~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
+|.-|-+.-.|.+.+ .+.+++|.++|++||+++|.||+..++ -.+... ....++-.| . +.+|+|
T Consensus 250 vI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~g-------a~~~~gv~P-----D--i~t~gK 314 (474)
T PLN02482 250 VILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGG-------AQEYFGITP-----D--LTTLGK 314 (474)
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcch-------HhHHhCCCC-----C--EEEecc
Confidence 677777566676655 788999999999999999999999765 222221 111122222 1 247899
Q ss_pred hcccccceeeEEEeCcHHHHHHHHhC----C-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 830 KMLTGALKFGFLVLNHPQLVDAFSSF----P-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 830 ~~g~~GlRiG~lv~~~~~li~~l~~~----~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
.+| .|+.+|.+++.++ +++.+... . .+.+.+++.-.++.+.|+.-.. +++.+.+.++-+.++++.+
T Consensus 315 ~lg-gG~Pigav~g~~e-i~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~--~~~~~~~~~~g~~l~~~L~ 385 (474)
T PLN02482 315 VIG-GGLPVGAYGGRRE-IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ--PGTYEYLDKITKKLIQGIL 385 (474)
T ss_pred hhh-CCCceEEEEEcHH-HHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHH
Confidence 998 7899999988877 88887532 1 2445566776677777742211 2234455555555554443
No 473
>PLN02724 Molybdenum cofactor sulfurase
Probab=98.64 E-value=4.3e-06 Score=104.51 Aligned_cols=214 Identities=12% Similarity=0.043 Sum_probs=136.5
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccC--CCC----C--chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQN--MSE----S--EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~--~~~----G--~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
++.|+.+...+.++..+.+++......+. +.. + ..+..+..++.+++.+|.+.. +-+|++|+|++++++++
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~-~~~VvFtsnaT~alnlv 113 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPS-DYACVFTSGATAALKLV 113 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCcc-ceEEEEeCChHHHHHHH
Confidence 78888876665555566666555543321 111 1 234567778888888887543 11589999999999999
Q ss_pred HHHh-ccCCCeEEEcCCCcHHHHH---HHHHcCCEEEEecCCCC------CCcccC--HHHHHHHhh----------cCC
Q 043334 689 VLCC-ILEGGTLCFPAGSNGNYVS---AARFLKANIVNIPTESE------VGFKMT--EKTLVTILE----------TVK 746 (903)
Q Consensus 689 l~~l-~~pGD~Vlv~~P~y~~~~~---~~~~~G~~vv~v~~~~~------~~f~ld--~~~L~~~l~----------~~~ 746 (903)
...+ +++||+|+++.-.|.+... .++..|+++..++++.+ +...++ .+++++.++ +++
T Consensus 114 a~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t 193 (805)
T PLN02724 114 GETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAY 193 (805)
T ss_pred HHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCc
Confidence 8887 6789999998777765443 34556999999987621 111233 255665531 223
Q ss_pred CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhC-----CcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 747 KPWVYISGPTINPTGLLYSNKEIENILTVCAKY-----GARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 747 ~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~-----~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
++|.++.-+ |-||.+++.+.+.++.+.+..+ ++++++|-+.+- +... ++ +... +..
T Consensus 194 -~LVa~~~vs-N~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~p--iD-------v~~~----~~D 254 (805)
T PLN02724 194 -NLFAFPSEC-NFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSP--PD-------LSRY----PAD 254 (805)
T ss_pred -ceEEEEccc-cCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCC--CC-------hhhc----CCC
Confidence 478888776 9999999976544444333222 367899987631 1110 11 1111 357
Q ss_pred EEEccCchhccc-ccceeeEEEeCcHHHHHHHH
Q 043334 822 SLLGGLSLKMLT-GALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 822 I~l~S~SK~~g~-~GlRiG~lv~~~~~li~~l~ 853 (903)
+++.|+-|.+|. .| +|++++.++ +.+.+.
T Consensus 255 fl~~S~HK~~GgP~G--~G~L~vr~~-~~~~l~ 284 (805)
T PLN02724 255 FVVVSFYKIFGYPTG--LGALLVRRD-AAKLLK 284 (805)
T ss_pred EEEEecceeccCCCC--ceEEEEehh-hhhhhc
Confidence 899999998873 35 799998876 665554
No 474
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.63 E-value=3.5e-06 Score=95.79 Aligned_cols=240 Identities=14% Similarity=0.129 Sum_probs=142.9
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc-
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL- 694 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~- 694 (903)
-.|||=...-.-.+.+...++|.. ....+|..+--..+.+..++.+|.+. ++.|..+..+-..++..+++
T Consensus 42 V~IDLrSDTgT~apS~~m~aAM~~----GDD~Y~gdpSv~~Lee~vael~G~E~-----alpthqGRgaE~Il~~~~~~~ 112 (467)
T TIGR02617 42 VFIDLLTDSGTGAVTQSMQAAMMR----GDEAYSGSRSYYALAESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKK 112 (467)
T ss_pred eEEECccCCCCCCCCHHHHHHHHc----CCcccccCchHHHHHHHHHHHhCCce-----EEECCCCchHHHHHHHhhccc
Confidence 467776555443456667777665 22234333333456666677778763 45554446666667888888
Q ss_pred CCCeEEEcCC-------C-cHHHHHHHHHcCCEEEEecCCC------CC--CcccCHHHHHHHhhcC---CCcEEEEECC
Q 043334 695 EGGTLCFPAG-------S-NGNYVSAARFLKANIVNIPTES------EV--GFKMTEKTLVTILETV---KKPWVYISGP 755 (903)
Q Consensus 695 pGD~Vlv~~P-------~-y~~~~~~~~~~G~~vv~v~~~~------~~--~f~ld~~~L~~~l~~~---~~~~vil~~P 755 (903)
|||++.+..+ . |......+...|+.++.++.+. +. ..++|++++++++++. ....+...--
T Consensus 113 ~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt 192 (467)
T TIGR02617 113 REQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATIT 192 (467)
T ss_pred ccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEE
Confidence 7887775443 2 3334567888999988875431 12 3468999999999852 2122222211
Q ss_pred CCCC-cccCCCHHHHHHHHHHHHhCCcEEEEecCCCC--Ccc--CC-CCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 756 TINP-TGLLYSNKEIENILTVCAKYGARVVIDTAFSG--LEF--NY-EGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 756 ~~NP-TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~--l~f--~~-~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
+ |- -|.++|.+.++++.++|++||+.++.|-+--. -.| .. ......++......+-.. -..+.-|+||
T Consensus 193 ~-N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~-----aDsvt~slsK 266 (467)
T TIGR02617 193 C-NSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKY-----ADMLAMSAKK 266 (467)
T ss_pred E-ecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhcc-----CCEEEEEcCC
Confidence 2 33 47899999999999999999999999974310 011 00 011113333333222222 3457789999
Q ss_pred hcccc-cceeeEEEeCcH---HHHHHHHhCC-------CCCCCcHHHHHHHHHHH
Q 043334 830 KMLTG-ALKFGFLVLNHP---QLVDAFSSFP-------GLSKPHSTVRYAIKKLL 873 (903)
Q Consensus 830 ~~g~~-GlRiG~lv~~~~---~li~~l~~~~-------~~~~~s~~~Q~aa~~~L 873 (903)
.++.| | |+++++++ ++.++++... ++.+.+.--..+.+.-|
T Consensus 267 glgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl 318 (467)
T TIGR02617 267 DAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGL 318 (467)
T ss_pred CCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhh
Confidence 99877 5 68888887 4555555432 14455554444444445
No 475
>PLN02263 serine decarboxylase
Probab=98.62 E-value=3.1e-06 Score=98.00 Aligned_cols=183 Identities=13% Similarity=0.067 Sum_probs=131.2
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc--CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCC
Q 043334 649 SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL--EGGTLCFPAGSNGNYVSAARFLKANIVNIPTE 726 (903)
Q Consensus 649 G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~--pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~ 726 (903)
+..++...+.+|+++.+|.+.+.- .=++|+|++++....+.+-.+ +...+++++-++.++..+++.+|.+++.||++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~-~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCC-eEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC
Confidence 456778899999999999864311 246678888877666655433 33478999999999999999999999999996
Q ss_pred CCCCcccCHHHHHHHhhcCC-Cc-EEEEECCCCCCcccCCCHHHHHHHHHHHHhCCc-----EEEEecCCCCCcc--CCC
Q 043334 727 SEVGFKMTEKTLVTILETVK-KP-WVYISGPTINPTGLLYSNKEIENILTVCAKYGA-----RVVIDTAFSGLEF--NYE 797 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~-~~-~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i-----~VI~DeaY~~l~f--~~~ 797 (903)
+ ++.+|+++|++++.+.+ ++ +|+.+-++ -+||.+ +.+++|.++|+++|+ |+.+|-+|+++.. -..
T Consensus 209 ~--~g~mD~~aL~~aI~~d~~~P~iVvataGT-T~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~ 282 (470)
T PLN02263 209 V--SGEIDCADFKAKLLANKDKPAIINVNIGT-TVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKR 282 (470)
T ss_pred C--CCcCcHHHHHHHHHhCCCCcEEEEEEecC-CCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccc
Confidence 3 67899999999887543 23 45566676 899999 458999999999986 9999999987543 111
Q ss_pred CCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH
Q 043334 798 GWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 798 ~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~ 853 (903)
. +.+... . .-.-+.-+..|..+ .-+-+|.++..++ .++.+.
T Consensus 283 ~-------~~~df~-~-----~vDSIsvD~HK~l~-~P~~cgvll~R~~-~~~~~~ 323 (470)
T PLN02263 283 A-------PKVTFK-K-----PIGSVSVSGHKFVG-CPMPCGVQITRME-HINVLS 323 (470)
T ss_pred c-------cccCCC-c-----CccEEEECCccccC-CCcCEEEEEEehh-hHhhhc
Confidence 1 001100 0 12335667789664 6678898888876 555443
No 476
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.62 E-value=2.8e-06 Score=94.94 Aligned_cols=265 Identities=12% Similarity=0.069 Sum_probs=163.2
Q ss_pred ccCCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHc-cCCC-CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 610 TETPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFAR-QNMS-ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 610 ~~~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~-y~~~-~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...+|...|||..| .+.++ .+|.+.+++.+-..+ ...+ .-..+.+.++++.+.+..+ ..+ .++++|+++++
T Consensus 37 ~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~~d---~vff~NSGaEA 112 (404)
T COG4992 37 WDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-FAD---RVFFCNSGAEA 112 (404)
T ss_pred ECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-ccc---EEEEcCCcHHH
Confidence 34678889998654 45555 578888888886554 2222 2245668888888888655 333 89999999999
Q ss_pred HHHHHHHhcc----CC-CeEEEcCCCcHHHHHHHHHcCCEEEE----ecCCCC---CCcccCHHHHHHHhhcCCCcEEEE
Q 043334 685 FNKLVLCCIL----EG-GTLCFPAGSNGNYVSAARFLKANIVN----IPTESE---VGFKMTEKTLVTILETVKKPWVYI 752 (903)
Q Consensus 685 l~~ll~~l~~----pG-D~Vlv~~P~y~~~~~~~~~~G~~vv~----v~~~~~---~~f~ld~~~L~~~l~~~~~~~vil 752 (903)
...++..-.. ++ -+|+....+|-+-.-.+-..+.+..+ -|+.+. -.| =|++++++++++++ .+|++
T Consensus 113 ~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-nDi~al~~ai~~~t-aAviv 190 (404)
T COG4992 113 NEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-NDIEALEAAIDEDT-AAVIV 190 (404)
T ss_pred HHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-CCHHHHHHHhccCe-EEEEE
Confidence 9988765422 22 25666555554322222112222110 122211 012 27899999999966 35555
Q ss_pred ECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 753 SGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 753 ~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
- |-|=-.|.+. +.+.++++-++|++||+++|.||+-.++--.|+-+ . .....-.| =+-++.|.+
T Consensus 191 E-PIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f---A----~e~~gV~P-------DI~tlaK~L 255 (404)
T COG4992 191 E-PIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF---A----YEHYGVEP-------DILTLAKAL 255 (404)
T ss_pred e-cccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH---H----HHHhCCCC-------CEEEeeccc
Confidence 4 5456667655 45678999999999999999999997765444431 1 11122222 144678999
Q ss_pred ccccceeeEEEeCcHHHHHHHHhC-C-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 832 LTGALKFGFLVLNHPQLVDAFSSF-P-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 832 g~~GlRiG~lv~~~~~li~~l~~~-~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
| .|+.+|.+++.+. +.+.+.-- + ++.+.+++.-.++.+.|+.-.. +.+-+..++.-+.+.++.+
T Consensus 256 g-GG~PigA~la~~~-~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~--e~ll~~v~~~g~~~~~~L~ 321 (404)
T COG4992 256 G-GGFPIGAMLATEE-IASAFTPGDHGSTFGGNPLACAVALAVLEVLLE--EGLLENVREKGEYLLQRLR 321 (404)
T ss_pred c-CCccceeeEEchh-hhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc--hhHHHHHHHHHHHHHHHHH
Confidence 8 7899999999844 55554432 2 3788888888888777742221 2333444444444444443
No 477
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.61 E-value=1.2e-05 Score=93.67 Aligned_cols=266 Identities=12% Similarity=0.087 Sum_probs=158.0
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
...|...||+..|. ..++ ..|.+.+++.+.+.+.....-..+....+++.+.+... .. + .++++++++++...
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~--~-~v~f~~sGseA~e~ 124 (428)
T PRK12389 49 DVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIP-SL--E-KVRFVNSGTEAVMT 124 (428)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCC-CC--c-EEEEeCCHHHHHHH
Confidence 35677889986553 3344 46778888888876532212233456667777766543 22 3 79999999998887
Q ss_pred HHHHhcc-CC-CeEEEcCCCcHHHH-HHHHHcCCEEEE--------ecCC-CCCCc---ccCHHHHHHHhhcC-CCcEEE
Q 043334 688 LVLCCIL-EG-GTLCFPAGSNGNYV-SAARFLKANIVN--------IPTE-SEVGF---KMTEKTLVTILETV-KKPWVY 751 (903)
Q Consensus 688 ll~~l~~-pG-D~Vlv~~P~y~~~~-~~~~~~G~~vv~--------v~~~-~~~~f---~ld~~~L~~~l~~~-~~~~vi 751 (903)
++..... .| ..|+...-+|-+.. ......|..... ++.. ..+.. ..|++.+++.+... ...+.+
T Consensus 125 AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaav 204 (428)
T PRK12389 125 TIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAV 204 (428)
T ss_pred HHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEE
Confidence 7764432 23 46776666665533 333322211110 0000 00000 12688888888632 123555
Q ss_pred EECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchh
Q 043334 752 ISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLK 830 (903)
Q Consensus 752 l~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~ 830 (903)
+.-|-+.-.|.+. +.+.+++|.++|+++|+++|.||+..++-. +... ....++-.| | +-+++|.
T Consensus 205 i~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt-~~~~-------a~~~~gv~P---D----ivt~gK~ 269 (428)
T PRK12389 205 LVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRF-MYGG-------AQDLLGVEP---D----LTALGKI 269 (428)
T ss_pred EEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccccc-Ccch-------hhHHhCCCC---C----eeeechh
Confidence 6666656667654 688899999999999999999999976522 1110 011122222 1 2378999
Q ss_pred cccccceeeEEEeCcHHHHHHHHhC----C-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 831 MLTGALKFGFLVLNHPQLVDAFSSF----P-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 831 ~g~~GlRiG~lv~~~~~li~~l~~~----~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
++ .|+.+|.++++++ +++.+... . .+.+.+++.-.++.+.|+.-.. +++.+.+.++-+.++++.+
T Consensus 270 lg-gG~Pi~av~~~~~-i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~ 339 (428)
T PRK12389 270 IG-GGLPIGAYGGRKD-IMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ--EGVYEKLDRLGAMLEEGIL 339 (428)
T ss_pred hc-CCCceeEEeEHHH-HHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHH
Confidence 97 6899999988877 88887531 1 2556677777777777753222 2344555555555555444
No 478
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.61 E-value=3e-06 Score=88.49 Aligned_cols=199 Identities=12% Similarity=0.130 Sum_probs=142.5
Q ss_pred CcHHHHHHHHHHHHccCC----CCC------chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCe
Q 043334 629 IPSLVKAAIFESFARQNM----SES------EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGT 698 (903)
Q Consensus 629 ~p~~v~~al~~al~~y~~----~~G------~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~ 698 (903)
.+++..+++.+--+.|+. ..| -|+.+.-+.+ ++++.|++ .+-+|+|+.++=..++.++|++||.
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~d-laeFlg~D-----~~R~t~GARe~KfavMhal~~~gd~ 102 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLED-LAEFLGMD-----EVRVTAGAREAKFAVMHALCKEGDW 102 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHH-HHHHhCCc-----eeeecccchhhHHHHHHHhccCCCE
Confidence 456666666665443322 012 1333443333 66666764 5778999999999999999999999
Q ss_pred EEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc------CCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 699 LCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET------VKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 699 Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~------~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
|++....+...--++..+|.++..+|-.....|.++++...+.+.+ ..+.+.++++|. |..=...+-+++
T Consensus 103 vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~D----g~YGNl~Dakkv 178 (382)
T COG1103 103 VVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVD----GEYGNLADAKKV 178 (382)
T ss_pred EEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccC----CCcCCchhhHHH
Confidence 9999998888778899999999999976556789999877666543 223477888777 444444668999
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
+++|+++++.++..-+|..-. -+. + ..+. +..++++|=.|+++ +.-.+|.+....+ +.+.+
T Consensus 179 a~ic~e~gvPlllN~AYt~Gr---mpv---s-------~ke~----g~DFiVgSGHKsmA-As~PiGvl~~~eE-~ae~V 239 (382)
T COG1103 179 AKICREYGVPLLLNCAYTVGR---MPV---S-------GKEI----GADFIVGSGHKSMA-ASAPIGVLAMSEE-WAEIV 239 (382)
T ss_pred HHHHHHcCCceEeecceeecc---ccc---c-------cccc----CCCEEEecCccchh-ccCCeeEEeehhH-HHHHH
Confidence 999999999999999994211 110 1 0111 35789999999997 4558999998877 77776
Q ss_pred HhCC
Q 043334 853 SSFP 856 (903)
Q Consensus 853 ~~~~ 856 (903)
.+..
T Consensus 240 ~r~S 243 (382)
T COG1103 240 LRRS 243 (382)
T ss_pred Hhhc
Confidence 5543
No 479
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=98.61 E-value=3.1e-07 Score=105.64 Aligned_cols=124 Identities=20% Similarity=0.329 Sum_probs=98.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.++||+-||.|.+++.+|+. ..+|+|+|+++++++.|++|++.|++ +|++|..+|..+..
T Consensus 293 ~~~~vlDlYCGvG~f~l~lA~~--~~~V~gvEi~~~aV~~A~~NA~~n~i----------------~N~~f~~~~ae~~~ 354 (432)
T COG2265 293 GGERVLDLYCGVGTFGLPLAKR--VKKVHGVEISPEAVEAAQENAAANGI----------------DNVEFIAGDAEEFT 354 (432)
T ss_pred CCCEEEEeccCCChhhhhhccc--CCEEEEEecCHHHHHHHHHHHHHcCC----------------CcEEEEeCCHHHHh
Confidence 4578999999999999999976 68999999999999999999999998 47999999998886
Q ss_pred cCC--CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 110 RDH--DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 110 ~~~--~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
... ...+|.|+-+||=.-.+. .+++.+ ..++|..+++
T Consensus 355 ~~~~~~~~~d~VvvDPPR~G~~~----------------------------------------~~lk~l-~~~~p~~IvY 393 (432)
T COG2265 355 PAWWEGYKPDVVVVDPPRAGADR----------------------------------------EVLKQL-AKLKPKRIVY 393 (432)
T ss_pred hhccccCCCCEEEECCCCCCCCH----------------------------------------HHHHHH-HhcCCCcEEE
Confidence 553 247899998877653221 233333 4467889999
Q ss_pred EEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 188 FNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
+.++.......+ ..|.+.||++.++
T Consensus 394 VSCNP~TlaRDl-~~L~~~gy~i~~v 418 (432)
T COG2265 394 VSCNPATLARDL-AILASTGYEIERV 418 (432)
T ss_pred EeCCHHHHHHHH-HHHHhCCeEEEEE
Confidence 998876666654 5778889887665
No 480
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.60 E-value=7.1e-06 Score=95.35 Aligned_cols=264 Identities=12% Similarity=0.094 Sum_probs=154.3
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
...|...||+..|. ..++ ..+.+.+++.+.+.......-..+....+++.+.+..+... + .+.++++++++...
T Consensus 49 D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~--~-~v~f~~SGsEA~e~ 125 (433)
T PRK00615 49 DSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLED--H-KIRFVSSGTEATMT 125 (433)
T ss_pred ECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCc--C-EEEEeCchHHHHHH
Confidence 35678899997663 3344 57888888888876533221223445667777776554322 2 78999988988887
Q ss_pred HHHHhcc-CC-CeEEEcCCCcHHHHH----HHHHcCCEE----EEe--cCCCCC----CcccCHHHHHHHhhcC-CCcEE
Q 043334 688 LVLCCIL-EG-GTLCFPAGSNGNYVS----AARFLKANI----VNI--PTESEV----GFKMTEKTLVTILETV-KKPWV 750 (903)
Q Consensus 688 ll~~l~~-pG-D~Vlv~~P~y~~~~~----~~~~~G~~v----v~v--~~~~~~----~f~ld~~~L~~~l~~~-~~~~v 750 (903)
++..... .| ..|+...-+|-+... .....+... ... +..... .+ -|.+.+++.+... ...+.
T Consensus 126 AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~aa 204 (433)
T PRK00615 126 AVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-NDFQIFQTVMNSLGHRVAG 204 (433)
T ss_pred HHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CCHHHHHHHHHhcCCceEE
Confidence 7765432 23 467766666655321 111111000 000 000000 11 2678888887532 22356
Q ss_pred EEECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 751 YISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 751 il~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
+|.-|-+.-.|... +.+.+++|.++|++||+++|.||++.++- .|... .....+-.| .|+ +|||
T Consensus 205 vI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R-~G~~g-------a~~~~gv~P-----Di~--~~gK 269 (433)
T PRK00615 205 VIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFR-VAQGG-------AAAIYHVKP-----DIT--VYGK 269 (433)
T ss_pred EEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccc-ccHhH-------HHHhcCCCC-----CeE--EEcc
Confidence 66667645556655 57889999999999999999999997662 23221 112222222 222 4899
Q ss_pred hcccccceeeEEEeCcHHHHHHHHhCC-----CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHH
Q 043334 830 KMLTGALKFGFLVLNHPQLVDAFSSFP-----GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESR 897 (903)
Q Consensus 830 ~~g~~GlRiG~lv~~~~~li~~l~~~~-----~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~R 897 (903)
.+| .|+.+|+++++++ +++.+.... .+.+.++..-.++.+.|+.-.. +.+.+.+.++-+.++++
T Consensus 270 ~lg-gG~p~~av~~~~~-i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~--~~~~~~~~~~g~~l~~~ 338 (433)
T PRK00615 270 ILG-GGLPAAAVVAHKS-IMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE--QGFYTQLSTLEQNFLSP 338 (433)
T ss_pred ccc-CCcceeeeeecHH-HHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHH
Confidence 997 6788999999887 888875321 2445567777777777753221 12344444444445444
No 481
>KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms]
Probab=98.59 E-value=2e-07 Score=101.74 Aligned_cols=79 Identities=24% Similarity=0.352 Sum_probs=67.1
Q ss_pred CCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcc
Q 043334 25 PDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESD 104 (903)
Q Consensus 25 ~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gD 104 (903)
....++++.|||+|||||.+++..|+.. ..+|+|+|.|.-+ +.|++.+..|+++ +.+++++|.
T Consensus 55 n~~lf~dK~VlDVGcGtGILS~F~akAG-A~~V~aVe~S~ia-~~a~~iv~~N~~~---------------~ii~vi~gk 117 (346)
T KOG1499|consen 55 NKHLFKDKTVLDVGCGTGILSMFAAKAG-ARKVYAVEASSIA-DFARKIVKDNGLE---------------DVITVIKGK 117 (346)
T ss_pred chhhcCCCEEEEcCCCccHHHHHHHHhC-cceEEEEechHHH-HHHHHHHHhcCcc---------------ceEEEeecc
Confidence 3336899999999999999999988874 7799999998754 9999999999983 579999999
Q ss_pred ccccccCCCCceeEEEE
Q 043334 105 LLAYCRDHDIQLERIVG 121 (903)
Q Consensus 105 l~~~~~~~~~~fD~Iv~ 121 (903)
+.+...+ ..++|+||+
T Consensus 118 vEdi~LP-~eKVDiIvS 133 (346)
T KOG1499|consen 118 VEDIELP-VEKVDIIVS 133 (346)
T ss_pred eEEEecC-ccceeEEee
Confidence 9888655 348999984
No 482
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.58 E-value=1.3e-05 Score=93.90 Aligned_cols=268 Identities=12% Similarity=0.071 Sum_probs=158.0
Q ss_pred cCCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCC-C-CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 611 ETPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNM-S-ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 611 ~~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~-~-~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
...|...+|+..| ...++ .++.+.+++.+.+.+... + .-..+.+..+++.+.+......+ .++++++++++.
T Consensus 78 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~---~v~f~~SGsEAv 154 (459)
T PRK11522 78 DTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLK---YSFFCNSGTESV 154 (459)
T ss_pred ECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCC---EEEEeCCchHHH
Confidence 3467788898766 44444 577888998888765322 1 22355667778877775432222 799999999988
Q ss_pred HHHHHHhcc----CC-CeEEEcCCCcHHHHHHH-HHcCCEEEE---ecCCCC---CCcccCHHHHHHHhhc----CCCcE
Q 043334 686 NKLVLCCIL----EG-GTLCFPAGSNGNYVSAA-RFLKANIVN---IPTESE---VGFKMTEKTLVTILET----VKKPW 749 (903)
Q Consensus 686 ~~ll~~l~~----pG-D~Vlv~~P~y~~~~~~~-~~~G~~vv~---v~~~~~---~~f~ld~~~L~~~l~~----~~~~~ 749 (903)
..++..... .| ..|+....+|-+....+ ...|-.... .|..+. -.| .|.+.+++.+.. ....+
T Consensus 155 e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~~~iA 233 (459)
T PRK11522 155 EAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNIEAMRTALSECKKTGDDVA 233 (459)
T ss_pred HHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCHHHHHHHHHHhhccCCcEE
Confidence 887765421 12 25777766665543322 222211111 111110 011 267788877752 12235
Q ss_pred EEEECCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc
Q 043334 750 VYISGPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS 828 (903)
Q Consensus 750 vil~~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S 828 (903)
.++.-|-+.-.|.+ .+.+.++++.++|++||+++|.||+..++--.|.. +. ....+-.| .| -+|+
T Consensus 234 avIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~---~a----~e~~gv~P-----Di--vt~g 299 (459)
T PRK11522 234 AVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKM---FA----CEHENVQP-----DI--LCLA 299 (459)
T ss_pred EEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchh---hh----hhccCCCC-----CE--EEec
Confidence 55666664556765 46778999999999999999999999654212221 11 11122222 22 2889
Q ss_pred hhccccc-ceeeEEEeCcHHHHHHHHhC----CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 829 LKMLTGA-LKFGFLVLNHPQLVDAFSSF----PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 829 K~~g~~G-lRiG~lv~~~~~li~~l~~~----~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
|.+| .| +.+|.+++.++ +.+.+..- ..+.+.++.+-.++.+.|+.-.. +++.+.+.++-+.++++.+.
T Consensus 300 K~lg-gG~~Pigav~~~~~-i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~ 372 (459)
T PRK11522 300 KALG-GGVMPIGATIATEE-VFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE--QNLPAQAEQKGDYLLDGFRQ 372 (459)
T ss_pred hhhh-CCCccceeEEEcHH-HHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHH
Confidence 9997 57 68999999877 87776421 12555677777777777743222 23445555555555544443
No 483
>PF05958 tRNA_U5-meth_tr: tRNA (Uracil-5-)-methyltransferase; InterPro: IPR010280 This family consists of (uracil-5-)-methyltransferases 2.1.1.35 from EC from bacteria, archaea and eukaryotes. A 5-methyluridine (m(5)U) residue at position 54 is a conserved feature of bacterial and eukaryotic tRNAs. The methylation of U54 is catalysed by the tRNA(m5U54)methyltransferase, which in Saccharomyces cerevisiae is encoded by the nonessential TRM2 gene. It is thought that tRNA modification enzymes might have a role in tRNA maturation not necessarily linked to their known catalytic activity []. This protein family also contains the 23SrRNA methyltransferases, first proposed to be RNA methyltransferases by homology to the TrmA family. The member from Escherichia coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA [].; GO: 0008173 RNA methyltransferase activity, 0006396 RNA processing; PDB: 2VS1_A 2JJQ_A 2BH2_A 1UWV_A 3BT7_B.
Probab=98.57 E-value=2.4e-07 Score=104.74 Aligned_cols=139 Identities=20% Similarity=0.335 Sum_probs=85.5
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccC
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD 111 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~ 111 (903)
.+|||+.||+|.+++.+|+. ..+|+|+|+++.+++.|++|+..|++ ++++|+.++..+....
T Consensus 198 ~~vlDlycG~G~fsl~la~~--~~~V~gvE~~~~av~~A~~Na~~N~i----------------~n~~f~~~~~~~~~~~ 259 (352)
T PF05958_consen 198 GDVLDLYCGVGTFSLPLAKK--AKKVIGVEIVEEAVEDARENAKLNGI----------------DNVEFIRGDAEDFAKA 259 (352)
T ss_dssp TEEEEES-TTTCCHHHHHCC--SSEEEEEES-HHHHHHHHHHHHHTT------------------SEEEEE--SHHCCCH
T ss_pred CcEEEEeecCCHHHHHHHhh--CCeEEEeeCCHHHHHHHHHHHHHcCC----------------CcceEEEeeccchhHH
Confidence 38999999999999999987 57999999999999999999999998 5899998876543210
Q ss_pred ---------------CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHH
Q 043334 112 ---------------HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEG 176 (903)
Q Consensus 112 ---------------~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~ 176 (903)
....+|+|+.+||=--.+ . .+++.+
T Consensus 260 ~~~~r~~~~~~~~~~~~~~~d~vilDPPR~G~~------~----------------------------------~~~~~~ 299 (352)
T PF05958_consen 260 LAKAREFNRLKGIDLKSFKFDAVILDPPRAGLD------E----------------------------------KVIELI 299 (352)
T ss_dssp HCCS-GGTTGGGS-GGCTTESEEEE---TT-SC------H----------------------------------HHHHHH
T ss_pred HHhhHHHHhhhhhhhhhcCCCEEEEcCCCCCch------H----------------------------------HHHHHH
Confidence 012689999777754211 1 223323
Q ss_pred hhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeec
Q 043334 177 IGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEK 240 (903)
Q Consensus 177 ~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~ 240 (903)
.+ +.=++++.++......-+. .|. .||++.++... ..|..+..++.++.++|
T Consensus 300 ~~---~~~ivYvSCnP~tlaRDl~-~L~-~~y~~~~v~~~-------DmFP~T~HvE~v~lL~r 351 (352)
T PF05958_consen 300 KK---LKRIVYVSCNPATLARDLK-ILK-EGYKLEKVQPV-------DMFPQTHHVETVALLER 351 (352)
T ss_dssp HH---SSEEEEEES-HHHHHHHHH-HHH-CCEEEEEEEEE--------SSTTSS--EEEEEEEE
T ss_pred hc---CCeEEEEECCHHHHHHHHH-HHh-hcCEEEEEEEe-------ecCCCCCcEEEEEEEEe
Confidence 22 3446667776654445543 454 48998877322 23344556776666665
No 484
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.57 E-value=9.5e-07 Score=100.27 Aligned_cols=211 Identities=13% Similarity=0.091 Sum_probs=124.2
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHc-cCC------CC-C---chHHHHHHHHHHHhhcCCC----CCCCCcEEecCc
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFAR-QNM------SE-S---EIDVTPSIQQYIKSNFGFP----IDINAEFIYADC 680 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~-y~~------~~-G---~~~lr~ala~~l~~~~G~~----~~pe~~I~vt~G 680 (903)
..|+|--++|. +++.+++++...+.. |.. .+ | ..++.+...+..++.||.+ .. +|-.-+|
T Consensus 21 ~~l~LiaSEN~--~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~a---nvqp~SG 95 (399)
T PF00464_consen 21 STLNLIASENY--MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYA---NVQPHSG 95 (399)
T ss_dssp HSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEE---E---SSH
T ss_pred cCccccCcccc--cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceE---EeecCCc
Confidence 57888877775 456666666555433 211 11 2 2334445566677888988 44 5666677
Q ss_pred hHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----------HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEE
Q 043334 681 SQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----------RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWV 750 (903)
Q Consensus 681 s~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----------~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~v 750 (903)
+.+.+ .++.+|++|||+|+..++..+++...- .....+.+++++++ ++..+|.+++++.+...++++|
T Consensus 96 s~An~-av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~-~~~~ID~d~l~~~a~~~kPklI 173 (399)
T PF00464_consen 96 SQANL-AVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDP-DTGLIDYDELEKLAKEHKPKLI 173 (399)
T ss_dssp HHHHH-HHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-T-TTSSB-HHHHHHHHHHH--SEE
T ss_pred hHHHH-HHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeec-CCCeECHHHHHHHHhhcCCCEE
Confidence 76554 568899999999999988776654321 22446888999986 3577999999999887665566
Q ss_pred EEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCC-CCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 751 YISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFS-GLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 751 il~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~-~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
++..-+ .|- . -+++++.++|.+.|.+|+.|-++- +|+-.+... +. ++. -.|+.+|.-|
T Consensus 174 i~G~S~-y~~--~---~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~------~P---~~~------ADvvt~sThK 232 (399)
T PF00464_consen 174 ICGASS-YPR--P---IDFKRFREIADEVGAYLMADISHIAGLIAGGLFP------NP---FPY------ADVVTGSTHK 232 (399)
T ss_dssp EEE-SS-TSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--------G---CCT------SSEEEEESSG
T ss_pred EECchh-ccC--c---cCHHHHHHHHHhcCcEEEecccccccceehheec------Cc---ccc------ceEEEeeccc
Confidence 555433 332 2 347888888999999999999883 233333221 11 111 3589999999
Q ss_pred hcccccceeeEEEeC-------------cHHHHHHHHhCC
Q 043334 830 KMLTGALKFGFLVLN-------------HPQLVDAFSSFP 856 (903)
Q Consensus 830 ~~g~~GlRiG~lv~~-------------~~~li~~l~~~~ 856 (903)
+| +|=|-|.|.++ ++++.+++.+..
T Consensus 233 tl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~av 270 (399)
T PF00464_consen 233 TL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAV 270 (399)
T ss_dssp GG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHH
T ss_pred cc--cccCceEEEEcCCccccCCcccccHHHHHHHhcccc
Confidence 98 68899999999 455888888743
No 485
>PLN02590 probable tyrosine decarboxylase
Probab=98.56 E-value=2.8e-05 Score=92.23 Aligned_cols=190 Identities=13% Similarity=0.143 Sum_probs=127.7
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCC----CCcEEecCchHHHHHHHHHHhcc-----------CCCeEEEcCCCcHHHHH
Q 043334 647 SESEIDVTPSIQQYIKSNFGFPIDI----NAEFIYADCSQSLFNKLVLCCIL-----------EGGTLCFPAGSNGNYVS 711 (903)
Q Consensus 647 ~~G~~~lr~ala~~l~~~~G~~~~p----e~~I~vt~Gs~~al~~ll~~l~~-----------pGD~Vlv~~P~y~~~~~ 711 (903)
+.+..++.+.+.+|+++.+|.+..- ...=++++|++++...++.+-.+ |.-.|++++.++.....
T Consensus 165 sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~K 244 (539)
T PLN02590 165 SPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRK 244 (539)
T ss_pred CchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHH
Confidence 4456778899999999999987420 01245566666655443433211 12256678889999999
Q ss_pred HHHHcCC---EEEEecCCCCCCcccCHHHHHHHhhcC----CCc-EEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEE
Q 043334 712 AARFLKA---NIVNIPTESEVGFKMTEKTLVTILETV----KKP-WVYISGPTINPTGLLYSNKEIENILTVCAKYGARV 783 (903)
Q Consensus 712 ~~~~~G~---~vv~v~~~~~~~f~ld~~~L~~~l~~~----~~~-~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~V 783 (903)
++..+|. +++.||++..+++.||+++|++++... ..+ +|+-+-.+ -+||.+ +.+++|.++|++||+|+
T Consensus 245 Aa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGT-T~tGai---Dpl~~Ia~i~~~~g~Wl 320 (539)
T PLN02590 245 ACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGT-TSSAAV---DPLVPLGNIAKKYGIWL 320 (539)
T ss_pred HHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCC-CCCccc---CCHHHHHHHHHHhCCeE
Confidence 9999998 589999986567899999999998642 224 44444444 778888 45999999999999999
Q ss_pred EEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH-HHHHHH
Q 043334 784 VIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP-QLVDAF 852 (903)
Q Consensus 784 I~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~-~li~~l 852 (903)
.+|-+|++...-... .+..+..+.. -.-+...+.|.+. ...-+|.++..+. .+.+.+
T Consensus 321 HVDaA~GG~al~~~~-----~r~~~~Gie~------ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~ 378 (539)
T PLN02590 321 HVDAAYAGNACICPE-----YRKFIDGIEN------ADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDAL 378 (539)
T ss_pred EEecchhhhhhcChh-----hHHHhcCCcc------CCEEEECchhhcC-cCcCEEEEEecCHHHHHHHh
Confidence 999999875421111 0111222221 2346778899764 6677888887764 244443
No 486
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=98.54 E-value=9.6e-07 Score=102.73 Aligned_cols=147 Identities=14% Similarity=0.132 Sum_probs=105.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||.|.-+..+|...++ ..|++.|+++.-++..++|+.+.|+ .++.+...|...
T Consensus 112 ~pg~~VLD~CAAPGgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~----------------~nv~v~~~D~~~ 175 (470)
T PRK11933 112 NAPQRVLDMAAAPGSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGV----------------SNVALTHFDGRV 175 (470)
T ss_pred CCCCEEEEeCCCccHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC----------------CeEEEEeCchhh
Confidence 37789999999999999999998754 5899999999999999999999887 478899999876
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
+.....+.||.|+..+|..-..-...-+.....+.++.. ... ..+-.++++.+.+.|||||+++
T Consensus 176 ~~~~~~~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v----~~l------------~~lQ~~iL~~A~~~LkpGG~LV 239 (470)
T PRK11933 176 FGAALPETFDAILLDAPCSGEGTVRKDPDALKNWSPESN----LEI------------AATQRELIESAFHALKPGGTLV 239 (470)
T ss_pred hhhhchhhcCeEEEcCCCCCCcccccCHHHhhhCCHHHH----HHH------------HHHHHHHHHHHHHHcCCCcEEE
Confidence 543323479999999998754333222211111111110 111 1234489999999999999998
Q ss_pred EEeCC---CCcHHHHHHHHHHCC
Q 043334 188 FNMGG---RPGQGVCKRLFERRG 207 (903)
Q Consensus 188 ~~~~~---~~~~~~l~~ll~~~g 207 (903)
..+.+ ......+..++++.+
T Consensus 240 YSTCT~~~eENE~vV~~~L~~~~ 262 (470)
T PRK11933 240 YSTCTLNREENQAVCLWLKETYP 262 (470)
T ss_pred EECCCCCHHHHHHHHHHHHHHCC
Confidence 87665 345556666777653
No 487
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.54 E-value=5.2e-06 Score=94.37 Aligned_cols=213 Identities=10% Similarity=0.100 Sum_probs=137.8
Q ss_pred CCCcHHHHHHHHHHHHcc--------CCCCCc---hHHHHHHHHHHHhhcCCCCCCCCcEE-ecCchHHHHHHHHHHhcc
Q 043334 627 LPIPSLVKAAIFESFARQ--------NMSESE---IDVTPSIQQYIKSNFGFPIDINAEFI-YADCSQSLFNKLVLCCIL 694 (903)
Q Consensus 627 ~~~p~~v~~al~~al~~y--------~~~~G~---~~lr~ala~~l~~~~G~~~~pe~~I~-vt~Gs~~al~~ll~~l~~ 694 (903)
-..|+.+++++...+..+ ....-. .++.+.+.+.+++.+|.+.+ . +++ ++++++.++..++..++.
T Consensus 12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~-~-~v~~~~gsgt~~~Ea~~~nl~~ 89 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDN-Y-KVLFLQGGASLQFAMVPMNLLG 89 (360)
T ss_pred CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC-c-EEEEEcCCchHHHHHHHHhcCC
Confidence 347889999988876432 111112 36677888888888887432 2 354 456778889999999999
Q ss_pred CCCeEEEcCCCcHH--HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 695 EGGTLCFPAGSNGN--YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 695 pGD~Vlv~~P~y~~--~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
+||++++..-+..+ +...++.+|.. ..+..++..++..+++..+..++++. ++|.+++-. |.||...+ .+.+|
T Consensus 90 ~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~-~~V~~th~e-TstGv~~~--~i~~i 164 (360)
T PRK05355 90 GGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDA-AYVHYTSNE-TIDGTEFH--ELPDT 164 (360)
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCC-CEEEEccCC-CcceEecC--ccccc
Confidence 99988877666554 45567888865 55555432333222333332666544 588888887 99999984 25554
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
+|+++|+|-+-+ ++..+. + + ++ ..+++.|--|.+|.|| +|+++++++ +.+++
T Consensus 165 ------~g~l~vVDavss---~g~~~i---d----v---~~------~d~~~~ssqK~lgP~G--lg~l~~s~~-~l~~~ 216 (360)
T PRK05355 165 ------GDVPLVADMSSD---ILSRPI---D----V---SK------FGLIYAGAQKNIGPAG--LTIVIVRED-LLGRA 216 (360)
T ss_pred ------CCCcEEEEcCcc---ccCccC---C----H---HH------ccEEEEeccccccCCc--eEEEEECHH-HHhhc
Confidence 799999999763 222221 1 1 11 1278888899999777 799999987 66665
Q ss_pred Hh-CC------------C-CCCCcHHHHHHHHHHHh
Q 043334 853 SS-FP------------G-LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 853 ~~-~~------------~-~~~~s~~~Q~aa~~~L~ 874 (903)
.. .. . ...++...-++..++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~ 252 (360)
T PRK05355 217 LPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFK 252 (360)
T ss_pred ccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHH
Confidence 44 11 1 34455556666666663
No 488
>KOG1500 consensus Protein arginine N-methyltransferase CARM1 [Posttranslational modification, protein turnover, chaperones; Transcription]
Probab=98.54 E-value=3.4e-07 Score=97.80 Aligned_cols=76 Identities=20% Similarity=0.283 Sum_probs=66.1
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.+.++.|||+|||+|.++...|+. +..+|++++-|. |.+.|++-++.|++ .+|+.++.|.+.+
T Consensus 175 DF~~kiVlDVGaGSGILS~FAaqA-GA~~vYAvEAS~-MAqyA~~Lv~~N~~---------------~~rItVI~GKiEd 237 (517)
T KOG1500|consen 175 DFQDKIVLDVGAGSGILSFFAAQA-GAKKVYAVEASE-MAQYARKLVASNNL---------------ADRITVIPGKIED 237 (517)
T ss_pred ccCCcEEEEecCCccHHHHHHHHh-CcceEEEEehhH-HHHHHHHHHhcCCc---------------cceEEEccCcccc
Confidence 388999999999999999998776 467999999975 99999999888876 5899999999999
Q ss_pred cccCCCCceeEEEEC
Q 043334 108 YCRDHDIQLERIVGC 122 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~N 122 (903)
...++ +.|+||+-
T Consensus 238 ieLPE--k~DviISE 250 (517)
T KOG1500|consen 238 IELPE--KVDVIISE 250 (517)
T ss_pred ccCch--hccEEEec
Confidence 87665 89999964
No 489
>PRK12403 putative aminotransferase; Provisional
Probab=98.54 E-value=2.3e-05 Score=92.03 Aligned_cols=245 Identities=11% Similarity=0.063 Sum_probs=143.2
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCC----CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMS----ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~----~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
...|...||+..|- ..++ ..|.+.+++.+.+.++... .+..+....+++.+.+..+...+ .+++++++++
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~---~v~f~~SGse 126 (460)
T PRK12403 50 DNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYS---HAIYTNSGSE 126 (460)
T ss_pred eCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcC---EEEEeCCcHH
Confidence 35677889976542 2233 4688999999988764321 23455677788888776543233 7888888888
Q ss_pred HHHHHHHHhc-------cCCCe-EEEcCCCcHH-HHHHHHHcCCE-----------EEEecCCC--CCCccc--------
Q 043334 684 LFNKLVLCCI-------LEGGT-LCFPAGSNGN-YVSAARFLKAN-----------IVNIPTES--EVGFKM-------- 733 (903)
Q Consensus 684 al~~ll~~l~-------~pGD~-Vlv~~P~y~~-~~~~~~~~G~~-----------vv~v~~~~--~~~f~l-------- 733 (903)
+...++.... ++++. |+...-+|-+ ........|.+ +..+|... ...+..
T Consensus 127 A~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 206 (460)
T PRK12403 127 ANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRR 206 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHH
Confidence 8888777663 23333 4443444433 33333333322 22222110 000111
Q ss_pred CHHHHHHHhhc--CCCcEEEEECCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhh
Q 043334 734 TEKTLVTILET--VKKPWVYISGPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSK 810 (903)
Q Consensus 734 d~~~L~~~l~~--~~~~~vil~~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~ 810 (903)
+.+.+++.+.+ ....+.+|.-|-+.--|.+ .+.+.+++|.++|++||+++|.||+..++-=.|.. +. ...
T Consensus 207 ~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~---~a----~e~ 279 (460)
T PRK12403 207 AALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEW---FA----HEH 279 (460)
T ss_pred HHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh---hh----hhh
Confidence 12445555532 1223456666664555654 57789999999999999999999999654222222 11 111
Q ss_pred hccCCCCCCceEEEccCchhcccccc-eeeEEEeCcHHHHHHHHhC-----C-CCCCCcHHHHHHHHHHHh
Q 043334 811 LYSSTNSSFNVSLLGGLSLKMLTGAL-KFGFLVLNHPQLVDAFSSF-----P-GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 811 l~~~~~~~~~vI~l~S~SK~~g~~Gl-RiG~lv~~~~~li~~l~~~-----~-~~~~~s~~~Q~aa~~~L~ 874 (903)
++-.| .|+ +++|.++ .|. .+|.+++.++ +.+.+... . .+.+.++.+-.++.+.|+
T Consensus 280 ~gv~P-----Div--~~gK~lg-gG~~Piga~v~~~~-i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~ 341 (460)
T PRK12403 280 FGFEP-----DTL--SIAKGLT-SGYVPMGGLVLSKR-IAEALVEQGGVFAHGLTYSGHPVAAAVAIANLK 341 (460)
T ss_pred cCCCC-----CeE--EEccccc-ccccceEEEEECHH-HHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 22222 233 3899997 574 8998888876 88877531 1 255566777777777774
No 490
>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase []. These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B ....
Probab=98.53 E-value=4e-07 Score=105.45 Aligned_cols=75 Identities=25% Similarity=0.318 Sum_probs=59.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHh----CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKW----LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDL 105 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~----~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl 105 (903)
+++.|+|+|||+|.++...++.. ...+|+++|.|+.++...++.++.|+. .++|+++++|+
T Consensus 186 ~~~vVldVGAGrGpL~~~al~A~~~~~~a~~VyAVEkn~~A~~~l~~~v~~n~w---------------~~~V~vi~~d~ 250 (448)
T PF05185_consen 186 KDKVVLDVGAGRGPLSMFALQAGARAGGAVKVYAVEKNPNAVVTLQKRVNANGW---------------GDKVTVIHGDM 250 (448)
T ss_dssp TT-EEEEES-TTSHHHHHHHHTTHHHCCESEEEEEESSTHHHHHHHHHHHHTTT---------------TTTEEEEES-T
T ss_pred cceEEEEeCCCccHHHHHHHHHHHHhCCCeEEEEEcCCHhHHHHHHHHHHhcCC---------------CCeEEEEeCcc
Confidence 35789999999999987665542 346999999999999888877777877 36899999999
Q ss_pred cccccCCCCceeEEEE
Q 043334 106 LAYCRDHDIQLERIVG 121 (903)
Q Consensus 106 ~~~~~~~~~~fD~Iv~ 121 (903)
.+...+. ++|+|||
T Consensus 251 r~v~lpe--kvDIIVS 264 (448)
T PF05185_consen 251 REVELPE--KVDIIVS 264 (448)
T ss_dssp TTSCHSS---EEEEEE
T ss_pred cCCCCCC--ceeEEEE
Confidence 9997765 8999995
No 491
>PRK07046 aminotransferase; Validated
Probab=98.52 E-value=2e-05 Score=92.29 Aligned_cols=261 Identities=11% Similarity=0.064 Sum_probs=157.3
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
...|...||+..|. ..++ ..|.+.+++.+.+.+........+....+++.+.+..+ .+ .+.++++++++...
T Consensus 71 D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~--~~---~v~F~nSGtEA~e~ 145 (453)
T PRK07046 71 DVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFG--LP---YWQVATTATDANRF 145 (453)
T ss_pred eCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC--CC---EEEEECCHHHHHHH
Confidence 34677889986553 3344 56788999988887643323344556677787877653 33 78999988888887
Q ss_pred HHHHhcc--CCCeEEEcCCCcHHHHH-HH-HHcCCEEEE------ec--CCC---CCCcccCHHHHHHHhhcCCCcEEEE
Q 043334 688 LVLCCIL--EGGTLCFPAGSNGNYVS-AA-RFLKANIVN------IP--TES---EVGFKMTEKTLVTILETVKKPWVYI 752 (903)
Q Consensus 688 ll~~l~~--pGD~Vlv~~P~y~~~~~-~~-~~~G~~vv~------v~--~~~---~~~f~ld~~~L~~~l~~~~~~~vil 752 (903)
+++.... ..+.|+...-+|-+... .. ...+.+... ++ ... .-.| -|++.+++.+.... .+.+|
T Consensus 146 AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~-vAavi 223 (453)
T PRK07046 146 VLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGD-VAAVL 223 (453)
T ss_pred HHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCC-eEEEE
Confidence 7765421 23567777766655421 11 111111000 00 000 0012 27899998886434 36666
Q ss_pred ECCCCCCcc-cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCc--cCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 753 SGPTINPTG-LLYSNKEIENILTVCAKYGARVVIDTAFSGLE--FNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 753 ~~P~~NPTG-~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~--f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
.-|-+.-.| ...+.+.++++.++|+++|+++|.||+.. +- +++. ...++-.| .++ +|+|
T Consensus 224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~----------~~~~gv~P-----Di~--t~gK 285 (453)
T PRK07046 224 AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGY----------TRAHGLEP-----DFL--VVGK 285 (453)
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcch----------hHHhCCCc-----cce--eehh
Confidence 677733334 34566889999999999999999999985 22 2221 11122222 222 5899
Q ss_pred hcccccceeeEEEeCcHHHHHHHHhC-----------CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 830 KMLTGALKFGFLVLNHPQLVDAFSSF-----------PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 830 ~~g~~GlRiG~lv~~~~~li~~l~~~-----------~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
.+| .|+.+|.++++++ +.+.+... .++.+.++.+-.++.+.|+.-.. +++.+.+.++-+.++++.
T Consensus 286 ~lg-gG~Pi~av~g~~~-i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~--~~~~~~~~~~g~~l~~~L 361 (453)
T PRK07046 286 PIA-GGVPCAVYGFSAE-LAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT--EAAYAHMLALAARLAAGL 361 (453)
T ss_pred hhc-CCCcceeeeehHH-HHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHH
Confidence 998 6899999999887 88887531 12556677777777777752111 223455555555555554
Q ss_pred HH
Q 043334 899 KR 900 (903)
Q Consensus 899 ~~ 900 (903)
+.
T Consensus 362 ~~ 363 (453)
T PRK07046 362 RA 363 (453)
T ss_pred HH
Confidence 43
No 492
>PLN02823 spermine synthase
Probab=98.52 E-value=9.5e-07 Score=98.67 Aligned_cols=119 Identities=21% Similarity=0.198 Sum_probs=85.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
..++||.+|+|.|..+..+.+..+..+|+.+|+|+++++.|++.+..++- .-..++++++.+|...+.
T Consensus 103 ~pk~VLiiGgG~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~------------~~~dprv~v~~~Da~~~L 170 (336)
T PLN02823 103 NPKTVFIMGGGEGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNRE------------AFCDKRLELIINDARAEL 170 (336)
T ss_pred CCCEEEEECCCchHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccc------------cccCCceEEEEChhHHHH
Confidence 46799999999999999888765567999999999999999988754320 001368999999999987
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHH-HHhhcccCCcEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVE-EGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~-~~~~~LkpgG~ll~ 188 (903)
....++||+|+...+--.... ... .+. -..+++ .+.+.|+|||++++
T Consensus 171 ~~~~~~yDvIi~D~~dp~~~~---~~~------------------~Ly-----------t~eF~~~~~~~~L~p~Gvlv~ 218 (336)
T PLN02823 171 EKRDEKFDVIIGDLADPVEGG---PCY------------------QLY-----------TKSFYERIVKPKLNPGGIFVT 218 (336)
T ss_pred hhCCCCccEEEecCCCccccC---cch------------------hhc-----------cHHHHHHHHHHhcCCCcEEEE
Confidence 655568999996532100000 000 000 125677 78999999999998
Q ss_pred EeCC
Q 043334 189 NMGG 192 (903)
Q Consensus 189 ~~~~ 192 (903)
..+.
T Consensus 219 q~~s 222 (336)
T PLN02823 219 QAGP 222 (336)
T ss_pred eccC
Confidence 7664
No 493
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.51 E-value=6.4e-06 Score=92.85 Aligned_cols=269 Identities=14% Similarity=0.108 Sum_probs=158.1
Q ss_pred cCCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCC---CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 611 ETPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNM---SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 611 ~~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~---~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...|...+|+..| ...++ -.+.+.+++.+.+..... .....+...++++.+.+..+...+ +++++++++++
T Consensus 12 d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~---~v~f~~sGseA 88 (339)
T PF00202_consen 12 DVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLD---RVFFANSGSEA 88 (339)
T ss_dssp ETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEE---EEEEESSHHHH
T ss_pred ECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccc---eeeeccCchHH
Confidence 3467788999644 44444 467888888888766433 223456678888888887744333 89999999999
Q ss_pred HHHHHHHhc-------cCC-CeEEEcCCCcHHHHHHHHH-c------------CCEEEEecCCCCCC---cccCHHHHHH
Q 043334 685 FNKLVLCCI-------LEG-GTLCFPAGSNGNYVSAARF-L------------KANIVNIPTESEVG---FKMTEKTLVT 740 (903)
Q Consensus 685 l~~ll~~l~-------~pG-D~Vlv~~P~y~~~~~~~~~-~------------G~~vv~v~~~~~~~---f~ld~~~L~~ 740 (903)
+..++.... .+| ..|+...-+|-+....+.. . ...+..+|...... ..-....+++
T Consensus 89 ve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 168 (339)
T PF00202_consen 89 VEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEE 168 (339)
T ss_dssp HHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHH
Confidence 998887665 223 5788888777653322211 1 12345555532100 0000111222
Q ss_pred H---hhcCCCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCC
Q 043334 741 I---LETVKKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTN 816 (903)
Q Consensus 741 ~---l~~~~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~ 816 (903)
. ...... +.+|.-|-+.-.|. ..+.+.+++|.++|+++|+++|.||+..++--.|.. +. .....-.|
T Consensus 169 ~~~~~~~~~i-aavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~---~a----~~~~gv~P- 239 (339)
T PF00202_consen 169 LIAALNADEI-AAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKF---FA----SEHYGVDP- 239 (339)
T ss_dssp HHHHHHGGGE-EEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSS---SG----HHHHTSSS-
T ss_pred HHHhhcCCcE-EEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCc---cc----eecccccC-
Confidence 2 222333 55566676334454 456788999999999999999999999776433432 11 22222222
Q ss_pred CCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHH
Q 043334 817 SSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNL 894 (903)
Q Consensus 817 ~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y 894 (903)
.|+ +++|.++ .|+.+|.++++++ +.+.+.... .+.+.++.+-.++.+.|+.-+. +++.+.+.+.-+.+
T Consensus 240 ----Div--~~gK~l~-gG~p~sav~~~~~-i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~--~~~~~~~~~~g~~l 309 (339)
T PF00202_consen 240 ----DIV--TFGKGLG-GGLPISAVLGSEE-IMEAFQPGSHGSTFGGNPLSCAAALATLEILEE--EDLLERVRELGERL 309 (339)
T ss_dssp ----SEE--EEEGGGG-TTSSEEEEEEEHH-HHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH--TTHHHHHHHHHHHH
T ss_pred ----ccc--ccccchh-hhhhcccccccch-hhccccccccccccccchHhhhhhhhHHHhhcc--HHHHHHHHHHHHHH
Confidence 233 3369997 6799999999987 777664322 3666677777777777742221 23445555555555
Q ss_pred HHHHHHH
Q 043334 895 ESRSKRL 901 (903)
Q Consensus 895 ~~Rr~~l 901 (903)
+++.+.+
T Consensus 310 ~~~L~~l 316 (339)
T PF00202_consen 310 REGLREL 316 (339)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 494
>PRK05965 hypothetical protein; Provisional
Probab=98.51 E-value=1.8e-05 Score=92.91 Aligned_cols=269 Identities=8% Similarity=0.016 Sum_probs=157.5
Q ss_pred cCCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCC---C-chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 611 ETPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSE---S-EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 611 ~~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~---G-~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
...|...||+..|. ..++ ..+.+.+++.+.+.+..... + ..+.+..+++.+.+......+ .+++++++++
T Consensus 42 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~---~v~f~~sGSE 118 (459)
T PRK05965 42 DASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLN---HVYFTLGGSD 118 (459)
T ss_pred ECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcC---EEEEeCChhH
Confidence 35677899986553 3333 46788899888876632211 1 234456677777765432222 7999999999
Q ss_pred HHHHHHHHhcc-------CC-CeEEEcCCCcHHHHHHH-HHcCC------------EEEEecCCC--CCCcccC------
Q 043334 684 LFNKLVLCCIL-------EG-GTLCFPAGSNGNYVSAA-RFLKA------------NIVNIPTES--EVGFKMT------ 734 (903)
Q Consensus 684 al~~ll~~l~~-------pG-D~Vlv~~P~y~~~~~~~-~~~G~------------~vv~v~~~~--~~~f~ld------ 734 (903)
+...++..... +| ..|+....+|-+....+ ...|. .+..++... ...+.-|
T Consensus 119 Ave~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (459)
T PRK05965 119 AVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIA 198 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHH
Confidence 98888765421 22 46777777776543221 11111 112222110 0001112
Q ss_pred --HHHHHHHhhcC--CCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhh
Q 043334 735 --EKTLVTILETV--KKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLS 809 (903)
Q Consensus 735 --~~~L~~~l~~~--~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~ 809 (903)
++.+++.+... ...+.+|.-|-|.-.|. +.+.+.++++.++|++||+++|.||+..++--.|..+ . ..
T Consensus 199 ~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~---a----~~ 271 (459)
T PRK05965 199 ASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF---A----CE 271 (459)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh---h----Hh
Confidence 25677766532 12245555566455566 4678899999999999999999999996653233221 1 11
Q ss_pred hhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHh--------CC-CCCCCcHHHHHHHHHHHhccccc
Q 043334 810 KLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSS--------FP-GLSKPHSTVRYAIKKLLGLRERK 879 (903)
Q Consensus 810 ~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~--------~~-~~~~~s~~~Q~aa~~~L~~~~~~ 879 (903)
..+-.| . +-.++|.++ .| +.+|.++++++ +.+.+.. .. .+++.++.+-.++.+.|+.-+.
T Consensus 272 ~~gv~P-----D--iv~~gKgl~-gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~- 341 (459)
T PRK05965 272 AEGVVP-----D--LMTVAKGLT-SGYVPMGAVLMSDH-VYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE- 341 (459)
T ss_pred hcCCCC-----C--eEEechhhc-cCCcceeEEEEcHH-HHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh-
Confidence 222223 1 234589997 68 49999999987 8887752 12 2566777777777777742221
Q ss_pred chhHHHHHHHHHHHHHHHHHH
Q 043334 880 ARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 880 ~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+.+.+...++-+.+.++.+.
T Consensus 342 -~~l~~~~~~~g~~l~~~l~~ 361 (459)
T PRK05965 342 -GGLLANGQKAGPRFAAGLDA 361 (459)
T ss_pred -ccHHHHHHHHHHHHHHHHHh
Confidence 23445555555555555443
No 495
>TIGR00755 ksgA dimethyladenosine transferase. Alternate name: S-adenosylmethionine--6-N',N'-adenosyl (rRNA) dimethyltransferase
Probab=98.51 E-value=3.8e-07 Score=98.47 Aligned_cols=75 Identities=28% Similarity=0.391 Sum_probs=63.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.++++... .++++++++|+.+..
T Consensus 29 ~~~~VLEiG~G~G~lt~~L~~~~--~~v~~iE~d~~~~~~l~~~~~~------------------~~~v~v~~~D~~~~~ 88 (253)
T TIGR00755 29 EGDVVLEIGPGLGALTEPLLKRA--KKVTAIEIDPRLAEILRKLLSL------------------YERLEVIEGDALKVD 88 (253)
T ss_pred CcCEEEEeCCCCCHHHHHHHHhC--CcEEEEECCHHHHHHHHHHhCc------------------CCcEEEEECchhcCC
Confidence 56899999999999999999984 5799999999999999987632 147999999998875
Q ss_pred cCCCCcee---EEEECCCCCC
Q 043334 110 RDHDIQLE---RIVGCIPQIL 127 (903)
Q Consensus 110 ~~~~~~fD---~Iv~NpPy~~ 127 (903)
.. .+| +|++|+||..
T Consensus 89 ~~---~~d~~~~vvsNlPy~i 106 (253)
T TIGR00755 89 LP---DFPKQLKVVSNLPYNI 106 (253)
T ss_pred hh---HcCCcceEEEcCChhh
Confidence 43 466 9999999873
No 496
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.51 E-value=2.2e-05 Score=92.94 Aligned_cols=267 Identities=11% Similarity=0.089 Sum_probs=159.4
Q ss_pred cCCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCCC----CCchHHHHHHHHHHHhhcC-CCCCCCCcEEecCchH
Q 043334 611 ETPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNMS----ESEIDVTPSIQQYIKSNFG-FPIDINAEFIYADCSQ 682 (903)
Q Consensus 611 ~~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~~----~G~~~lr~ala~~l~~~~G-~~~~pe~~I~vt~Gs~ 682 (903)
...|...||+..| ...++ ..|.+.+++.+.+.++... .+..+....+++.+.+.+. .+.+ .++++++++
T Consensus 85 D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~---~v~f~~SGs 161 (504)
T PLN02760 85 DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMG---KVFFTNSGS 161 (504)
T ss_pred ECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCC---EEEEeCChH
Confidence 3467889998765 33444 5778899998888764321 2345566778888776543 2222 688888889
Q ss_pred HHHHHHHHHhc------c-CC-CeEEEcCCCcHHH-HHHHHHcCCE------------EEEecCCCCCCcc---------
Q 043334 683 SLFNKLVLCCI------L-EG-GTLCFPAGSNGNY-VSAARFLKAN------------IVNIPTESEVGFK--------- 732 (903)
Q Consensus 683 ~al~~ll~~l~------~-pG-D~Vlv~~P~y~~~-~~~~~~~G~~------------vv~v~~~~~~~f~--------- 732 (903)
++...++.... . +| ..|+..+-+|-+. .......|.. +..++.. +.|.
T Consensus 162 EA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~ 239 (504)
T PLN02760 162 EANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP--HYWRFHLPGETEE 239 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--cccccCCCCCcHH
Confidence 88888777653 1 22 4677666666543 3333323321 1112211 0111
Q ss_pred ----cCHHHHHHHhhcC--CCcEEEEECCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchh
Q 043334 733 ----MTEKTLVTILETV--KKPWVYISGPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLE 805 (903)
Q Consensus 733 ----ld~~~L~~~l~~~--~~~~vil~~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~ 805 (903)
...+.+++.+... ...+.+|.-|-+.-.|.+ .+.+.+++|.++|++||+++|.||+..++--.|.. +.
T Consensus 240 ~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~---~a-- 314 (504)
T PLN02760 240 EFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTM---FG-- 314 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchh---hH--
Confidence 0124566666421 223566666764545654 46889999999999999999999999555222222 11
Q ss_pred hhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhC--------C-CCCCCcHHHHHHHHHHHhc
Q 043334 806 GCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF--------P-GLSKPHSTVRYAIKKLLGL 875 (903)
Q Consensus 806 ~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~--------~-~~~~~s~~~Q~aa~~~L~~ 875 (903)
....+-.| | +-+|+|.+| .| +.+|.++++++ +.+.+... . .+.+.++.+-.++.+.|+.
T Consensus 315 --~e~~gv~P---D----ivtlgK~lg-gG~~PigAv~~~~~-i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~ 383 (504)
T PLN02760 315 --CDKYNIKP---D----LVSLAKALS-SAYMPIGAVLVSPE-ISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKI 383 (504)
T ss_pred --HHhcCCCC---c----EEEeccccc-CCccccceEeecHH-HHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHH
Confidence 11122222 2 567899997 45 58999999877 88887531 2 2556677777778777743
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHH
Q 043334 876 RERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 876 ~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
-.. +.+.++++++-+.++++.+.
T Consensus 384 i~~--~~l~~~~~~~g~~l~~~L~~ 406 (504)
T PLN02760 384 YKE--RNIPEHVNKIAPRFQDGIKA 406 (504)
T ss_pred HHh--CCHHHHHHHHHHHHHHHHHH
Confidence 222 23455666666666655543
No 497
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=1.9e-06 Score=95.78 Aligned_cols=196 Identities=11% Similarity=0.148 Sum_probs=134.7
Q ss_pred CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCC
Q 043334 648 ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTES 727 (903)
Q Consensus 648 ~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~ 727 (903)
.|..+..+.+++.++++.|++.. +++..| -+.-.+.+.+++.||.-|+-..-.+.....-++..|+.++.+..+
T Consensus 178 ~G~~~~hkelE~l~A~f~g~e~a----~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN- 251 (519)
T KOG1357|consen 178 AGTTEEHKELEELVARFLGVEDA----IVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN- 251 (519)
T ss_pred cccHHHHHHHHHHHHHhcCCcce----EEEecc-ccccccCcceeecCCcceeeccccchheeccccccCceEEEEecC-
Confidence 47778888999999999998755 788777 334444577889999999999999999999999999999988764
Q ss_pred CCCcccCHHHHHHHhhc-------CCC---cEEEEECCC-CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCC
Q 043334 728 EVGFKMTEKTLVTILET-------VKK---PWVYISGPT-INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNY 796 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~-------~~~---~~vil~~P~-~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~ 796 (903)
|...|++.+++ ++- +.++++.-+ -.--|.+. .+.+++++++++..+++.||+++--.-+.
T Consensus 252 ------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv---~Lp~vvalkkkykayl~lDEAHSiGA~g~ 322 (519)
T KOG1357|consen 252 ------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIV---DLPEVVALKKKYKAYLYLDEAHSIGAMGA 322 (519)
T ss_pred ------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeec---ccHHHHHhhccccEEEEeeccccccccCC
Confidence 34555555542 110 123333333 13445554 48999999999999999999996433322
Q ss_pred CCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC-----CCCCcHHHHHHHH
Q 043334 797 EGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG-----LSKPHSTVRYAIK 870 (903)
Q Consensus 797 ~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~-----~~~~s~~~Q~aa~ 870 (903)
.+ ..+ ..+.+. ++.+..|.+++|+|+||..| ||+.++++ +++.++.... .+.++...|....
T Consensus 323 tG---rgv----ce~~g~-d~~dvDImMGtftKSfga~G---Gyiagsk~-lid~lrt~s~~~~yat~~sppvaqq~~s 389 (519)
T KOG1357|consen 323 TG---RGV----CEYFGV-DPEDVDIMMGTFTKSFGAAG---GYIAGSKE-LIDYLRTPSPSALYATSLSPPVAQQILT 389 (519)
T ss_pred CC---cce----eeccCC-Cchhheeecceehhhccccc---ceecCcHH-HHhhhccCCCceeecccCChHHHHHHHH
Confidence 21 111 111111 12468899999999999998 99999988 9998876543 3334444454443
No 498
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.50 E-value=5.6e-06 Score=96.31 Aligned_cols=168 Identities=15% Similarity=0.181 Sum_probs=127.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCc--
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGF-- 731 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f-- 731 (903)
.....++.++.+|.+.+ .++++|++.+...++++++.+||.|+++.+++-+....+...|+.++++....+..|
T Consensus 72 i~eAqe~aA~~fgAd~t----yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi 147 (557)
T COG1982 72 IKEAQELAARVFGADHT----YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGI 147 (557)
T ss_pred HHHHHHHHHHHhCCCce----EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccc
Confidence 34566777788887765 999999999999999999999999999999999999999999999999977543312
Q ss_pred --ccCHHHHHHHhhcC-CC-cEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 732 --KMTEKTLVTILETV-KK-PWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 732 --~ld~~~L~~~l~~~-~~-~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
.++.+.+++.+... .. ++++++||+ =-|.+++ .++|++.+.++++++.+|+++. ..++-.+. . +-
T Consensus 148 ~ggI~~~~~~~~l~~~~~~~k~~vitnpT--YdGv~~n---~~~i~~~~~~~~a~v~~deah~-~~~~~~~~--l---~~ 216 (557)
T COG1982 148 IGGIPLETFKEALLAHPDAEKLAVITNPT--YDGVCYN---LRKIVELLHHYGAWVLYDEAHP-AHFDFSPM--L---PE 216 (557)
T ss_pred cCCCCHHHHHHHHHhChhhheeEEEecCc--cceEeec---HHHHHHHHhhcCceEEhhhcCc-cccccccc--C---cc
Confidence 36889998776543 33 589999886 7799999 7788888899999999999874 22222111 0 00
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceee-EEEeC
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVLN 844 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~~ 844 (903)
.... ...+++..|.-|..+ ++.-+ ++...
T Consensus 217 -~~~~-----~~~~~~tqS~HK~l~--alSQaS~iHv~ 246 (557)
T COG1982 217 -SALN-----GGADFVTQSTHKLLA--ALSQASMIHVK 246 (557)
T ss_pred -hhhh-----cCceEEEechhhhhh--hhhhhHHHhhC
Confidence 1111 147899999999874 66655 45454
No 499
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.50 E-value=3.2e-05 Score=90.69 Aligned_cols=268 Identities=12% Similarity=0.035 Sum_probs=155.6
Q ss_pred CCCCCeEEccCC-CCCCC-CcHHHHHHHHHHHHccCCC--CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 612 TPNSGLIHMDVD-QSFLP-IPSLVKAAIFESFARQNMS--ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 612 ~~~~~~IdLs~g-~p~~~-~p~~v~~al~~al~~y~~~--~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
..|...+|+..+ ...++ ..|.+.+++.+.+.+.... .-..+....+++.+.+..+...+ .++++++++++...
T Consensus 69 ~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~---~v~f~~sGseAve~ 145 (459)
T PRK06082 69 VDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELN---RVLFAPGGTSAIGM 145 (459)
T ss_pred CCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCC---EEEECCCcHHHHHH
Confidence 467788998622 22244 5778999998888764321 12345667788888876542222 79999999999888
Q ss_pred HHHHhcc--CCCeEEEcCCCcHHHH-HHHHHcCCE------------EEEecCCCC--CCcc-cC------HHHHHHHhh
Q 043334 688 LVLCCIL--EGGTLCFPAGSNGNYV-SAARFLKAN------------IVNIPTESE--VGFK-MT------EKTLVTILE 743 (903)
Q Consensus 688 ll~~l~~--pGD~Vlv~~P~y~~~~-~~~~~~G~~------------vv~v~~~~~--~~f~-ld------~~~L~~~l~ 743 (903)
++..... ....|+...-+|-+.. ......|.. +..+|.... ..|. .| ++.+++.+.
T Consensus 146 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 225 (459)
T PRK06082 146 ALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIE 225 (459)
T ss_pred HHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHh
Confidence 7765421 2256766666665432 233222211 122221100 0011 01 355777765
Q ss_pred cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 744 TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
.....+.+|.-|-++-.+.+.+.+.+++|.++|++||+++|.||+..++--.|.. +. ....+-.| .|+
T Consensus 226 ~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~---fa----~e~~gv~P-----Div 293 (459)
T PRK06082 226 KEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEW---FT----HQAYGIEP-----DIL 293 (459)
T ss_pred cCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchh---hH----hHhhCCCC-----CEE
Confidence 3222356666666555556788899999999999999999999999764222221 11 11222222 233
Q ss_pred EccCchhccccc-ceeeEEEeCcHHHHHHHHh--CCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSS--FPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 824 l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~--~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+|+|.++ .| +.+|.+++.++ +.+.+.. ...+.+.++++-.++.+.|+.-.. +.+.+.+.++-+.++++.+.
T Consensus 294 --~~gKgl~-gG~~P~~av~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~ 367 (459)
T PRK06082 294 --CIGKGLG-GGLVPIAAMITKDK-YNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ--EGLLEKVKADSQFMRERLLE 367 (459)
T ss_pred --Eeccccc-CCCCcceEEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHH
Confidence 3899998 56 58999999876 6554321 113556677777777777742211 23445555555555555443
No 500
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.49 E-value=1.5e-05 Score=94.44 Aligned_cols=191 Identities=12% Similarity=0.128 Sum_probs=124.1
Q ss_pred CCCchHHHHHHHHHHHhhcCCCC---------CCC-CcEEecCchHHHHHHHHHHh----cc------------------
Q 043334 647 SESEIDVTPSIQQYIKSNFGFPI---------DIN-AEFIYADCSQSLFNKLVLCC----IL------------------ 694 (903)
Q Consensus 647 ~~G~~~lr~ala~~l~~~~G~~~---------~pe-~~I~vt~Gs~~al~~ll~~l----~~------------------ 694 (903)
+....++.+.+.+|+.+..+... .++ ..=++|+|++++...++.+- +.
T Consensus 124 spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~ 203 (522)
T TIGR03799 124 SKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALK 203 (522)
T ss_pred CcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhh
Confidence 34456777888899888764210 111 12455666666554444332 11
Q ss_pred ----CCCeEEEcCCCcHHHHHHHHHcCC---EEEEecCCCCCCcccCHHHHHHHhh----cCCCcEEEEECCCCCCcccC
Q 043334 695 ----EGGTLCFPAGSNGNYVSAARFLKA---NIVNIPTESEVGFKMTEKTLVTILE----TVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 695 ----pGD~Vlv~~P~y~~~~~~~~~~G~---~vv~v~~~~~~~f~ld~~~L~~~l~----~~~~~~vil~~P~~NPTG~v 763 (903)
++..|+++.-.+.....+++..|. +++.+|+++ ++.+|+++|++.++ ..++++.++...+.+.||.+
T Consensus 204 ~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGai 281 (522)
T TIGR03799 204 HYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNI 281 (522)
T ss_pred hccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCc
Confidence 234788999999999999999998 799999974 56799999999886 33433444433333799999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
-+ +++|.++|+++|+++.+|-+|+....-... .-..+.+.. .-..+..|.-|.++. -.-+|.++.
T Consensus 282 Dp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~--------~r~~l~gle---~aDSit~d~HK~l~~-P~g~G~llv 346 (522)
T TIGR03799 282 DP---LDEMADIAQELGCHFHVDAAWGGATLLSNT--------YRHLLKGIE---RADSVTIDAHKQLYV-PMGAGMVLF 346 (522)
T ss_pred CC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHH--------HHHHhcCch---hCCEEEEChhhcCCc-CcccEEEEE
Confidence 88 889999999999999999999753221111 111112210 235688899995542 344798888
Q ss_pred CcHHHHHHHHh
Q 043334 844 NHPQLVDAFSS 854 (903)
Q Consensus 844 ~~~~li~~l~~ 854 (903)
.+..+.+.+..
T Consensus 347 r~~~~~~~~~~ 357 (522)
T TIGR03799 347 KDPALMSAIEH 357 (522)
T ss_pred eCHHHHHHhcc
Confidence 76546555543
Done!