Query 043334
Match_columns 903
No_of_seqs 696 out of 4545
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 06:26:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043334.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043334hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b5p_A Protein (aspartate amin 100.0 6.6E-36 2.3E-40 338.3 30.0 295 587-902 4-304 (385)
2 3k7y_A Aspartate aminotransfer 100.0 2E-35 7E-40 337.6 33.5 300 589-902 6-329 (405)
3 3jtx_A Aminotransferase; NP_28 100.0 8.6E-34 2.9E-38 321.0 31.0 298 588-902 3-311 (396)
4 4f4e_A Aromatic-amino-acid ami 100.0 3.6E-33 1.2E-37 319.7 29.1 301 587-902 24-349 (420)
5 3fvs_A Kynurenine--oxoglutarat 100.0 1.8E-33 6.3E-38 321.2 26.1 298 587-902 6-321 (422)
6 1gd9_A Aspartate aminotransfer 100.0 1.1E-32 3.7E-37 311.4 31.9 293 587-902 3-302 (389)
7 3b46_A Aminotransferase BNA3; 100.0 2.7E-33 9.3E-38 323.8 27.0 290 594-902 33-344 (447)
8 3e2y_A Kynurenine-oxoglutarate 100.0 3E-33 1E-37 318.0 25.5 297 588-902 2-314 (410)
9 2r2n_A Kynurenine/alpha-aminoa 100.0 2.9E-33 1E-37 321.1 24.8 293 587-902 7-334 (425)
10 3h14_A Aminotransferase, class 100.0 1.2E-32 4E-37 311.6 28.5 283 590-902 7-296 (391)
11 3aow_A Putative uncharacterize 100.0 1.1E-32 3.7E-37 319.1 28.8 287 587-902 54-357 (448)
12 1j32_A Aspartate aminotransfer 100.0 9.5E-33 3.2E-37 311.8 27.5 294 588-902 4-304 (388)
13 2x5d_A Probable aminotransfera 100.0 1.1E-32 3.6E-37 314.6 27.7 296 587-902 10-312 (412)
14 3t18_A Aminotransferase class 100.0 2.5E-32 8.7E-37 311.4 28.3 302 588-902 9-340 (413)
15 3ezs_A Aminotransferase ASPB; 100.0 2.7E-32 9.1E-37 306.5 27.9 284 593-902 3-297 (376)
16 2dou_A Probable N-succinyldiam 100.0 1.5E-32 5E-37 309.2 25.4 283 597-902 8-297 (376)
17 1u08_A Hypothetical aminotrans 100.0 4E-32 1.4E-36 306.7 28.2 289 588-902 9-303 (386)
18 1o4s_A Aspartate aminotransfer 100.0 4.5E-32 1.5E-36 307.2 28.1 273 587-874 14-292 (389)
19 2o1b_A Aminotransferase, class 100.0 3.1E-32 1.1E-36 310.4 26.6 291 588-902 23-320 (404)
20 2o0r_A RV0858C (N-succinyldiam 100.0 5E-32 1.7E-36 309.0 28.1 291 587-902 3-300 (411)
21 3rq1_A Aminotransferase class 100.0 7.5E-32 2.6E-36 308.0 27.9 275 613-902 36-342 (418)
22 3ele_A Amino transferase; RER0 100.0 6.6E-32 2.3E-36 305.9 26.0 272 587-874 4-301 (398)
23 7aat_A Aspartate aminotransfer 100.0 5.8E-32 2E-36 307.0 25.6 296 593-902 9-330 (401)
24 1xi9_A Putative transaminase; 100.0 8.1E-32 2.8E-36 306.7 26.3 291 587-902 12-317 (406)
25 1yiz_A Kynurenine aminotransfe 100.0 1.1E-31 3.8E-36 307.6 27.4 295 587-902 15-329 (429)
26 3dyd_A Tyrosine aminotransfera 100.0 7.4E-32 2.5E-36 309.8 25.8 286 596-902 36-337 (427)
27 3fdb_A Beta C-S lyase, putativ 100.0 2.4E-31 8.1E-36 298.6 29.4 266 611-902 19-291 (377)
28 4eu1_A Mitochondrial aspartate 100.0 2.9E-32 9.9E-37 310.7 21.7 301 587-902 16-338 (409)
29 3kax_A Aminotransferase, class 100.0 4E-31 1.4E-35 297.1 30.4 271 613-902 22-299 (383)
30 3fsl_A Aromatic-amino-acid ami 100.0 3.7E-31 1.3E-35 299.4 28.9 297 592-902 6-327 (397)
31 3dzz_A Putative pyridoxal 5'-p 100.0 5.3E-31 1.8E-35 297.0 29.7 273 612-902 24-303 (391)
32 3g0t_A Putative aminotransfera 100.0 2E-31 6.9E-36 305.7 26.2 278 612-902 41-348 (437)
33 4dq6_A Putative pyridoxal phos 100.0 7.9E-31 2.7E-35 295.6 29.6 271 613-902 30-307 (391)
34 3tcm_A Alanine aminotransferas 100.0 6.3E-31 2.2E-35 308.6 29.7 268 630-902 108-397 (500)
35 2z61_A Probable aspartate amin 100.0 7.2E-31 2.5E-35 294.7 28.3 282 587-902 2-290 (370)
36 3nra_A Aspartate aminotransfer 100.0 5.1E-31 1.7E-35 299.1 26.9 267 616-901 40-319 (407)
37 3ihj_A Alanine aminotransferas 100.0 6E-31 2E-35 308.7 27.4 268 630-902 103-396 (498)
38 1c7n_A Cystalysin; transferase 100.0 7.4E-31 2.5E-35 297.4 26.9 270 615-902 31-307 (399)
39 2gb3_A Aspartate aminotransfer 100.0 3.5E-31 1.2E-35 302.0 23.9 290 587-902 16-311 (409)
40 1iay_A ACC synthase 2, 1-amino 100.0 1.9E-30 6.4E-35 297.5 29.7 274 615-902 36-337 (428)
41 1vp4_A Aminotransferase, putat 100.0 6.7E-31 2.3E-35 301.3 25.8 287 587-902 21-328 (425)
42 3qgu_A LL-diaminopimelate amin 100.0 5.4E-31 1.8E-35 303.9 24.3 288 588-902 40-358 (449)
43 1bw0_A TAT, protein (tyrosine 100.0 1.3E-30 4.4E-35 297.4 27.0 270 614-902 32-326 (416)
44 3ei9_A LL-diaminopimelate amin 100.0 8.5E-31 2.9E-35 300.7 24.8 288 587-902 26-346 (432)
45 3meb_A Aspartate aminotransfer 100.0 6.5E-31 2.2E-35 304.1 23.6 297 589-902 26-365 (448)
46 3ly1_A Putative histidinol-pho 100.0 5.6E-30 1.9E-34 285.2 29.5 263 612-902 13-277 (354)
47 1yaa_A Aspartate aminotransfer 100.0 1.5E-30 5.2E-35 296.6 25.4 299 588-902 5-338 (412)
48 1ajs_A Aspartate aminotransfer 100.0 2.5E-30 8.5E-35 294.6 26.3 298 588-902 6-338 (412)
49 4h51_A Aspartate aminotransfer 100.0 1.1E-30 3.7E-35 299.3 23.4 300 587-902 17-345 (420)
50 1d2f_A MALY protein; aminotran 100.0 5.4E-30 1.9E-34 289.6 28.7 268 615-902 28-303 (390)
51 2zc0_A Alanine glyoxylate tran 100.0 4.8E-30 1.7E-34 291.5 28.4 292 587-902 7-316 (407)
52 2q7w_A Aspartate aminotransfer 100.0 1.9E-30 6.6E-35 293.5 23.2 295 591-902 5-326 (396)
53 3l8a_A METC, putative aminotra 100.0 6.8E-30 2.3E-34 292.6 27.9 271 614-902 60-337 (421)
54 3ffh_A Histidinol-phosphate am 100.0 1.1E-29 3.7E-34 284.1 27.2 258 613-902 30-289 (363)
55 3get_A Histidinol-phosphate am 100.0 7.6E-30 2.6E-34 285.6 25.6 259 613-902 28-291 (365)
56 3piu_A 1-aminocyclopropane-1-c 100.0 6.9E-30 2.4E-34 293.6 25.8 277 613-902 36-342 (435)
57 2x5f_A Aspartate_tyrosine_phen 100.0 2E-30 6.9E-35 297.4 20.1 271 614-902 46-348 (430)
58 1v2d_A Glutamine aminotransfer 100.0 1.1E-29 3.7E-34 286.3 24.6 282 587-902 3-291 (381)
59 3d6k_A Putative aminotransfera 100.0 3.5E-30 1.2E-34 295.3 20.3 266 616-902 33-327 (422)
60 2ay1_A Aroat, aromatic amino a 100.0 6.8E-29 2.3E-33 280.8 28.9 294 590-902 4-323 (394)
61 3asa_A LL-diaminopimelate amin 100.0 1.7E-29 5.8E-34 287.2 24.0 260 612-902 30-309 (400)
62 2zyj_A Alpha-aminodipate amino 100.0 5.3E-29 1.8E-33 282.4 27.2 283 587-902 10-305 (397)
63 3euc_A Histidinol-phosphate am 100.0 8E-29 2.7E-33 277.5 27.7 256 613-902 28-290 (367)
64 2zy4_A L-aspartate beta-decarb 100.0 1.2E-29 4E-34 300.7 22.0 261 617-902 106-424 (546)
65 1fg7_A Histidinol phosphate am 100.0 2E-29 6.7E-34 282.5 22.2 251 615-902 29-280 (356)
66 1lc5_A COBD, L-threonine-O-3-p 100.0 7.9E-29 2.7E-33 277.7 26.5 256 613-902 22-281 (364)
67 3ppl_A Aspartate aminotransfer 100.0 9.7E-30 3.3E-34 291.7 19.2 268 614-902 32-329 (427)
68 3cq5_A Histidinol-phosphate am 100.0 2.9E-28 1E-32 273.7 30.3 255 617-902 32-295 (369)
69 3ftb_A Histidinol-phosphate am 100.0 1.9E-28 6.4E-33 273.4 27.9 254 613-902 24-280 (361)
70 3f6t_A Aspartate aminotransfer 100.0 2.8E-29 9.7E-34 296.8 21.7 269 616-902 104-427 (533)
71 3ez1_A Aminotransferase MOCR f 100.0 1.6E-29 5.6E-34 289.0 17.7 282 594-902 10-323 (423)
72 3b1d_A Betac-S lyase; HET: PLP 99.9 1.9E-31 6.3E-36 302.3 0.0 269 616-902 32-307 (392)
73 3g7q_A Valine-pyruvate aminotr 100.0 3.8E-28 1.3E-32 276.6 22.8 265 613-902 29-319 (417)
74 3op7_A Aminotransferase class 100.0 6.8E-28 2.3E-32 270.7 23.3 230 643-902 58-289 (375)
75 3p1t_A Putative histidinol-pho 100.0 2.7E-27 9.2E-32 261.5 27.5 227 613-874 14-242 (337)
76 3if2_A Aminotransferase; YP_26 100.0 4.7E-28 1.6E-32 278.7 21.3 267 614-902 30-345 (444)
77 3hdo_A Histidinol-phosphate am 100.0 7.4E-27 2.5E-31 261.2 28.8 249 613-902 24-278 (360)
78 3fkd_A L-threonine-O-3-phospha 100.0 7.6E-27 2.6E-31 259.9 27.7 225 613-874 13-241 (350)
79 3bwn_A AT1G70560, L-tryptophan 100.0 1.6E-28 5.5E-33 279.1 13.2 252 612-902 19-295 (391)
80 1uu1_A Histidinol-phosphate am 100.0 3E-27 1E-31 262.0 22.0 244 615-902 19-266 (335)
81 2hox_A ALLIIN lyase 1; cystein 99.9 4E-27 1.4E-31 270.8 10.7 248 614-902 55-330 (427)
82 3a2b_A Serine palmitoyltransfe 99.9 1.1E-24 3.8E-29 246.7 24.9 252 613-902 41-308 (398)
83 1bs0_A Protein (8-amino-7-oxon 99.9 1.4E-22 4.7E-27 228.2 26.9 252 613-902 37-303 (384)
84 1vjo_A Alanine--glyoxylate ami 99.9 5.9E-23 2E-27 231.8 22.0 242 626-902 42-308 (393)
85 3tqx_A 2-amino-3-ketobutyrate 99.9 1.9E-22 6.4E-27 227.7 25.4 255 613-902 41-312 (399)
86 1e5e_A MGL, methionine gamma-l 99.9 1.5E-22 5.3E-27 230.9 24.9 221 617-874 20-258 (404)
87 1eg5_A Aminotransferase; PLP-d 99.9 6.2E-22 2.1E-26 221.8 25.9 247 618-902 3-273 (384)
88 2dr1_A PH1308 protein, 386AA l 99.9 4.9E-22 1.7E-26 223.0 24.3 239 628-902 30-294 (386)
89 1t3i_A Probable cysteine desul 99.9 4.7E-22 1.6E-26 225.7 24.4 213 614-856 26-255 (420)
90 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.5E-22 5.2E-27 226.1 19.0 212 614-856 6-235 (371)
91 3kki_A CAI-1 autoinducer synth 99.9 7E-22 2.4E-26 224.9 22.7 253 613-902 57-321 (409)
92 1fc4_A 2-amino-3-ketobutyrate 99.9 2.7E-21 9.3E-26 218.9 26.0 229 613-874 43-293 (401)
93 2rfv_A Methionine gamma-lyase; 99.9 9.9E-22 3.4E-26 223.2 22.3 221 618-874 23-259 (398)
94 2w8t_A SPT, serine palmitoyltr 99.9 2.5E-21 8.7E-26 222.0 25.6 233 613-874 62-309 (427)
95 1kmj_A Selenocysteine lyase; p 99.9 2.6E-21 8.9E-26 218.4 25.1 213 614-856 21-250 (406)
96 3lvm_A Cysteine desulfurase; s 99.9 6.3E-22 2.1E-26 225.6 19.9 253 612-902 18-297 (423)
97 1svv_A Threonine aldolase; str 99.9 2.3E-22 8E-27 223.1 14.9 220 613-854 11-238 (359)
98 2bwn_A 5-aminolevulinate synth 99.9 7.8E-21 2.7E-25 215.3 26.2 252 614-901 45-314 (401)
99 1sff_A 4-aminobutyrate aminotr 99.9 1.3E-21 4.5E-26 223.3 19.1 267 612-901 38-338 (426)
100 1elu_A L-cysteine/L-cystine C- 99.9 1.7E-21 5.7E-26 219.0 19.6 255 615-902 15-310 (390)
101 4adb_A Succinylornithine trans 99.9 4E-21 1.4E-25 217.7 22.4 255 612-899 36-320 (406)
102 3f9t_A TDC, L-tyrosine decarbo 99.9 9E-21 3.1E-25 212.8 24.0 231 626-873 39-302 (397)
103 2eo5_A 419AA long hypothetical 99.9 4E-21 1.4E-25 219.8 21.4 242 612-874 39-325 (419)
104 2eh6_A Acoat, acetylornithine 99.9 5.4E-21 1.8E-25 214.3 20.3 234 612-874 25-286 (375)
105 2ord_A Acoat, acetylornithine 99.9 6.9E-21 2.4E-25 215.6 21.3 231 613-874 38-296 (397)
106 4eb5_A Probable cysteine desul 99.9 6.8E-21 2.3E-25 213.4 20.6 245 619-902 3-269 (382)
107 3i4j_A Aminotransferase, class 99.9 2.1E-20 7.2E-25 214.2 24.1 243 612-874 26-311 (430)
108 3cai_A Possible aminotransfera 99.9 1E-20 3.5E-25 214.4 20.7 256 616-902 26-316 (406)
109 2aeu_A Hypothetical protein MJ 99.8 6.8E-21 2.3E-25 215.0 17.2 221 613-874 25-252 (374)
110 1b9h_A AHBA synthase, protein 99.8 2.5E-20 8.6E-25 210.2 21.8 202 622-854 4-213 (388)
111 3zrp_A Serine-pyruvate aminotr 99.8 3.8E-20 1.3E-24 207.2 23.1 200 625-852 9-210 (384)
112 3vax_A Putative uncharacterize 99.8 5.7E-21 2E-25 215.8 16.5 252 613-902 17-297 (400)
113 1zod_A DGD, 2,2-dialkylglycine 99.8 2.4E-20 8.2E-25 213.8 21.8 266 613-900 41-343 (433)
114 1s0a_A Adenosylmethionine-8-am 99.8 5.6E-20 1.9E-24 210.6 24.8 267 612-899 40-348 (429)
115 2huf_A Alanine glyoxylate amin 99.8 6.7E-20 2.3E-24 206.5 24.5 210 614-855 17-230 (393)
116 2ch1_A 3-hydroxykynurenine tra 99.8 3.8E-20 1.3E-24 208.7 22.3 247 621-902 21-295 (396)
117 3a9z_A Selenocysteine lyase; P 99.8 8.8E-21 3E-25 217.0 17.3 250 615-902 17-319 (432)
118 4hvk_A Probable cysteine desul 99.8 2.7E-20 9.1E-25 207.8 20.7 243 619-902 3-269 (382)
119 2z9v_A Aspartate aminotransfer 99.8 7.6E-20 2.6E-24 206.0 24.2 246 617-901 9-282 (392)
120 3ruy_A Ornithine aminotransfer 99.8 1.7E-20 5.9E-25 211.8 18.9 233 612-874 33-297 (392)
121 1vef_A Acetylornithine/acetyl- 99.8 3.1E-20 1E-24 210.0 20.8 263 613-898 43-321 (395)
122 2yrr_A Aminotransferase, class 99.8 5.3E-20 1.8E-24 203.4 22.1 239 626-902 8-268 (353)
123 2po3_A 4-dehydrase; external a 99.8 1.2E-19 4.2E-24 207.6 24.7 207 613-855 12-224 (424)
124 1m32_A 2-aminoethylphosphonate 99.8 3.2E-20 1.1E-24 206.2 19.2 249 616-902 4-279 (366)
125 1iug_A Putative aspartate amin 99.8 4.1E-20 1.4E-24 204.7 19.2 236 626-902 9-265 (352)
126 1ibj_A CBL, cystathionine beta 99.8 2.6E-20 8.8E-25 216.3 17.4 222 616-874 90-326 (464)
127 3nnk_A Ureidoglycine-glyoxylat 99.8 1.7E-19 5.9E-24 204.2 23.8 202 626-856 21-225 (411)
128 3f0h_A Aminotransferase; RER07 99.8 1.9E-19 6.3E-24 201.6 23.7 208 617-855 20-230 (376)
129 1v72_A Aldolase; PLP-dependent 99.8 4.4E-20 1.5E-24 204.7 16.9 216 613-855 5-235 (356)
130 2pb2_A Acetylornithine/succiny 99.8 2.3E-19 7.8E-24 205.5 22.5 256 612-899 54-338 (420)
131 3isl_A Purine catabolism prote 99.8 4.6E-19 1.6E-23 201.0 24.9 199 626-854 19-221 (416)
132 3kgw_A Alanine-glyoxylate amin 99.8 1.8E-19 6.2E-24 202.4 21.0 242 625-902 30-300 (393)
133 3dxv_A Alpha-amino-epsilon-cap 99.8 2.8E-19 9.6E-24 205.4 21.7 241 612-874 40-314 (439)
134 1jg8_A L-ALLO-threonine aldola 99.8 2.5E-19 8.5E-24 198.5 19.2 232 614-874 2-249 (347)
135 2dkj_A Serine hydroxymethyltra 99.8 1.2E-19 4E-24 205.5 16.2 250 615-901 23-293 (407)
136 3nx3_A Acoat, acetylornithine 99.8 8.9E-19 3E-23 198.1 22.9 233 612-874 33-294 (395)
137 3l44_A Glutamate-1-semialdehyd 99.8 6.2E-19 2.1E-23 202.2 21.7 264 612-898 52-340 (434)
138 2ez2_A Beta-tyrosinase, tyrosi 99.8 9.6E-19 3.3E-23 201.8 23.3 215 617-855 44-281 (456)
139 2oga_A Transaminase; PLP-depen 99.8 4.4E-19 1.5E-23 201.3 20.0 223 615-873 30-270 (399)
140 3a8u_X Omega-amino acid--pyruv 99.8 5.8E-19 2E-23 203.5 21.3 266 613-899 48-366 (449)
141 2bkw_A Alanine-glyoxylate amin 99.8 4.6E-19 1.6E-23 198.6 19.5 201 616-850 5-220 (385)
142 2b3t_A Protein methyltransfera 99.8 2.5E-19 8.7E-24 193.6 16.7 180 2-215 83-262 (276)
143 2cy8_A D-phgat, D-phenylglycin 99.8 1E-18 3.5E-23 201.8 22.6 257 612-900 54-343 (453)
144 3ndn_A O-succinylhomoserine su 99.8 1.5E-18 5.3E-23 198.5 23.4 192 646-873 75-274 (414)
145 3n5m_A Adenosylmethionine-8-am 99.8 1.4E-18 4.7E-23 200.7 23.1 263 612-898 46-358 (452)
146 3n0l_A Serine hydroxymethyltra 99.8 2.6E-19 9E-24 203.3 16.7 226 616-873 26-272 (417)
147 3ffr_A Phosphoserine aminotran 99.8 3.5E-19 1.2E-23 197.7 17.2 222 617-874 5-257 (362)
148 4ffc_A 4-aminobutyrate aminotr 99.8 1E-18 3.6E-23 202.2 21.2 265 612-898 61-361 (453)
149 4a6r_A Omega transaminase; tra 99.8 8E-19 2.7E-23 203.3 20.0 244 612-874 47-337 (459)
150 1z7d_A Ornithine aminotransfer 99.8 3.9E-18 1.3E-22 196.2 25.5 259 612-901 62-352 (433)
151 1cs1_A CGS, protein (cystathio 99.8 2.6E-18 8.8E-23 194.1 23.1 186 653-873 53-245 (386)
152 1w23_A Phosphoserine aminotran 99.8 7.8E-20 2.7E-24 203.5 10.4 241 616-902 3-275 (360)
153 3cog_A Cystathionine gamma-lya 99.8 3.1E-18 1.1E-22 195.3 23.1 185 654-874 69-261 (403)
154 2c0r_A PSAT, phosphoserine ami 99.8 2.1E-19 7.2E-24 200.7 12.8 242 616-902 4-276 (362)
155 1pff_A Methionine gamma-lyase; 99.8 1.9E-18 6.5E-23 190.5 20.2 182 657-873 3-193 (331)
156 2c81_A Glutamine-2-deoxy-scyll 99.8 3.7E-18 1.3E-22 194.8 23.1 201 621-854 5-215 (418)
157 3acz_A Methionine gamma-lyase; 99.8 4.5E-18 1.5E-22 192.8 23.3 188 651-874 58-253 (389)
158 1gc0_A Methionine gamma-lyase; 99.8 1.1E-18 3.8E-23 198.3 18.2 192 647-874 60-260 (398)
159 1mdo_A ARNB aminotransferase; 99.8 9.8E-18 3.4E-22 188.9 25.4 200 616-855 9-212 (393)
160 3qhx_A Cystathionine gamma-syn 99.8 8.4E-18 2.9E-22 190.9 24.7 190 650-874 64-260 (392)
161 1wyu_B Glycine dehydrogenase s 99.8 1.7E-18 5.7E-23 201.6 19.3 251 616-902 67-357 (474)
162 4dzr_A Protein-(glutamine-N5) 99.8 1.1E-19 3.6E-24 187.3 7.9 185 2-216 2-192 (215)
163 2oat_A Ornithine aminotransfer 99.8 5.4E-18 1.8E-22 195.4 23.0 256 612-898 73-360 (439)
164 3dod_A Adenosylmethionine-8-am 99.8 4.2E-18 1.4E-22 196.6 22.2 241 612-874 41-333 (448)
165 3ecd_A Serine hydroxymethyltra 99.8 1.8E-18 6.1E-23 196.8 18.6 251 587-873 9-280 (425)
166 3gju_A Putative aminotransfera 99.8 8.6E-18 2.9E-22 194.7 24.4 243 612-874 48-343 (460)
167 2e7u_A Glutamate-1-semialdehyd 99.8 5.3E-18 1.8E-22 194.0 21.9 259 612-900 49-339 (424)
168 1qz9_A Kynureninase; kynurenin 99.8 5.9E-18 2E-22 192.2 22.2 203 615-854 27-251 (416)
169 2epj_A Glutamate-1-semialdehyd 99.8 4.8E-18 1.6E-22 195.0 21.3 259 612-900 53-343 (434)
170 3fq8_A Glutamate-1-semialdehyd 99.8 4.6E-18 1.6E-22 194.5 19.8 258 612-899 49-338 (427)
171 3mad_A Sphingosine-1-phosphate 99.8 7.8E-18 2.7E-22 197.8 21.9 178 649-846 136-328 (514)
172 3dr4_A Putative perosamine syn 99.8 1.4E-17 4.9E-22 187.9 22.8 204 615-855 22-230 (391)
173 3oks_A 4-aminobutyrate transam 99.8 4.6E-18 1.6E-22 196.6 19.0 243 612-874 58-341 (451)
174 1rv3_A Serine hydroxymethyltra 99.8 1.8E-18 6.3E-23 201.8 15.7 227 587-846 21-271 (483)
175 1qgn_A Protein (cystathionine 99.8 1.5E-17 5E-22 192.0 22.7 188 651-873 113-307 (445)
176 1n8p_A Cystathionine gamma-lya 99.8 4.6E-18 1.6E-22 193.2 17.6 185 652-873 55-250 (393)
177 3uwc_A Nucleotide-sugar aminot 99.8 1.4E-17 4.7E-22 186.4 21.0 204 615-856 6-213 (374)
178 3nyt_A Aminotransferase WBPE; 99.8 8E-18 2.8E-22 188.6 18.8 211 629-873 14-242 (367)
179 3k28_A Glutamate-1-semialdehyd 99.8 9.5E-18 3.3E-22 192.3 19.2 242 612-874 50-316 (429)
180 3ht4_A Aluminum resistance pro 99.8 1.8E-17 6.1E-22 190.6 21.4 179 652-854 65-258 (431)
181 3pj0_A LMO0305 protein; struct 99.8 4.5E-18 1.5E-22 189.3 15.6 230 616-873 14-253 (359)
182 3h7f_A Serine hydroxymethyltra 99.8 5.2E-18 1.8E-22 195.9 16.7 251 587-873 22-292 (447)
183 3tfu_A Adenosylmethionine-8-am 99.8 1.3E-17 4.5E-22 193.3 20.0 265 613-899 71-377 (457)
184 1o69_A Aminotransferase; struc 99.8 7.9E-17 2.7E-21 182.5 25.9 191 630-856 11-209 (394)
185 3mc6_A Sphingosine-1-phosphate 99.8 1.4E-17 4.8E-22 194.5 20.2 207 628-851 75-300 (497)
186 3evz_A Methyltransferase; NYSG 99.8 3.9E-17 1.3E-21 170.9 21.1 188 2-242 32-221 (230)
187 3i5t_A Aminotransferase; pyrid 99.8 2.9E-17 9.8E-22 191.4 22.1 264 612-898 51-366 (476)
188 3ju7_A Putative PLP-dependent 99.7 8.8E-17 3E-21 181.6 25.3 203 620-856 5-216 (377)
189 2cb1_A O-acetyl homoserine sul 99.7 1E-16 3.5E-21 182.9 26.1 184 626-845 31-218 (412)
190 2dgk_A GAD-beta, GADB, glutama 99.7 4.3E-17 1.5E-21 188.3 22.3 198 628-846 53-278 (452)
191 3hmu_A Aminotransferase, class 99.7 6.5E-17 2.2E-21 188.2 23.1 244 612-874 52-340 (472)
192 1ax4_A Tryptophanase; tryptoph 99.7 2.8E-17 9.7E-22 190.0 19.8 221 613-854 32-290 (467)
193 3jzl_A Putative cystathionine 99.7 4.5E-17 1.5E-21 185.9 20.0 172 654-854 61-252 (409)
194 3gbx_A Serine hydroxymethyltra 99.7 1.7E-17 5.7E-22 188.4 16.2 249 616-901 31-301 (420)
195 2fq6_A Cystathionine beta-lyas 99.7 1.1E-16 3.6E-21 183.3 22.2 176 644-855 74-256 (415)
196 4e77_A Glutamate-1-semialdehyd 99.7 9.8E-17 3.3E-21 183.7 21.2 262 612-899 50-339 (429)
197 3e9k_A Kynureninase; kynurenin 99.7 1.3E-16 4.5E-21 184.7 22.4 209 614-852 65-298 (465)
198 3lws_A Aromatic amino acid bet 99.7 2.2E-17 7.4E-22 183.8 14.1 197 648-873 43-251 (357)
199 1nv8_A HEMK protein; class I a 99.7 1.7E-17 5.8E-22 180.3 12.8 165 2-206 96-264 (284)
200 2vi8_A Serine hydroxymethyltra 99.7 1.5E-17 5.3E-22 187.9 12.9 249 615-902 24-293 (405)
201 2fnu_A Aminotransferase; prote 99.7 2.5E-16 8.5E-21 175.9 22.1 192 628-855 10-207 (375)
202 3lpm_A Putative methyltransfer 99.7 3.2E-16 1.1E-20 167.7 21.7 204 30-300 49-253 (259)
203 3ri6_A O-acetylhomoserine sulf 99.7 2.9E-16 1E-20 180.4 22.2 163 646-843 76-242 (430)
204 3nmy_A Xometc, cystathionine g 99.7 3E-16 1E-20 178.8 21.9 191 647-873 62-261 (400)
205 3frk_A QDTB; aminotransferase, 99.7 2.2E-16 7.6E-21 177.0 20.5 192 629-854 15-210 (373)
206 3i16_A Aluminum resistance pro 99.7 2.8E-16 9.5E-21 180.1 20.8 172 654-854 75-269 (427)
207 3hvy_A Cystathionine beta-lyas 99.7 3.3E-16 1.1E-20 179.6 20.7 172 654-855 76-270 (427)
208 2cjg_A L-lysine-epsilon aminot 99.7 1.3E-16 4.5E-21 184.2 17.1 265 612-900 51-370 (449)
209 2fyf_A PSAT, phosphoserine ami 99.7 1.4E-16 4.9E-21 180.4 16.1 240 615-902 39-311 (398)
210 2h00_A Methyltransferase 10 do 99.7 7.1E-16 2.4E-20 164.1 19.5 193 2-214 32-236 (254)
211 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 1.9E-15 6.6E-20 173.6 24.1 200 614-851 30-240 (437)
212 2z67_A O-phosphoseryl-tRNA(SEC 99.7 1.3E-15 4.3E-20 176.4 20.4 203 650-873 131-343 (456)
213 2oqx_A Tryptophanase; lyase, p 99.7 2.1E-15 7.2E-20 174.2 21.5 220 613-853 30-291 (467)
214 1js3_A DDC;, DOPA decarboxylas 99.7 3E-15 1E-19 174.5 22.9 202 629-848 86-321 (486)
215 2ozv_A Hypothetical protein AT 99.6 1.2E-15 4E-20 163.6 14.7 197 30-295 36-242 (260)
216 2okj_A Glutamate decarboxylase 99.6 2.1E-14 7.2E-19 168.2 24.8 183 650-851 130-334 (504)
217 2ctz_A O-acetyl-L-homoserine s 99.6 4.1E-15 1.4E-19 170.3 18.0 159 652-844 58-221 (421)
218 3q87_B N6 adenine specific DNA 99.6 2.3E-15 7.8E-20 150.7 13.6 149 6-217 2-150 (170)
219 3vp6_A Glutamate decarboxylase 99.6 3.1E-14 1.1E-18 167.3 25.2 204 630-852 109-338 (511)
220 3hbx_A GAD 1, glutamate decarb 99.6 8.5E-15 2.9E-19 171.6 20.2 201 628-849 67-296 (502)
221 3b8x_A WBDK, pyridoxamine 5-ph 99.6 2.7E-14 9.4E-19 161.0 23.2 201 617-854 3-213 (390)
222 2x3l_A ORN/Lys/Arg decarboxyla 99.6 2.4E-15 8.2E-20 173.7 14.5 167 653-849 58-229 (446)
223 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.3E-14 4.3E-19 150.4 16.6 141 30-216 41-182 (214)
224 1wyu_A Glycine dehydrogenase ( 99.6 1.3E-14 4.5E-19 166.8 16.5 199 617-852 66-282 (438)
225 3ke3_A Putative serine-pyruvat 99.6 1.5E-13 5.2E-18 154.7 24.4 177 651-854 34-222 (379)
226 2a7v_A Serine hydroxymethyltra 99.6 1.1E-14 3.6E-19 169.7 15.2 224 591-846 35-281 (490)
227 3mti_A RRNA methylase; SAM-dep 99.6 4.4E-14 1.5E-18 142.5 17.5 137 30-213 22-166 (185)
228 2jis_A Cysteine sulfinic acid 99.6 1.7E-13 5.8E-18 161.0 24.3 181 650-851 146-349 (515)
229 3p9n_A Possible methyltransfer 99.6 3E-14 1E-18 144.5 14.9 125 13-193 29-156 (189)
230 2fca_A TRNA (guanine-N(7)-)-me 99.6 3.2E-14 1.1E-18 147.7 15.3 141 30-216 38-179 (213)
231 3d2l_A SAM-dependent methyltra 99.6 3.1E-15 1.1E-19 157.2 7.3 206 30-326 33-240 (243)
232 4gek_A TRNA (CMO5U34)-methyltr 99.6 2E-14 6.9E-19 154.1 13.7 107 29-189 69-177 (261)
233 3hm2_A Precorrin-6Y C5,15-meth 99.5 5.4E-14 1.9E-18 140.4 15.9 147 5-214 5-151 (178)
234 3kr9_A SAM-dependent methyltra 99.5 5.7E-14 2E-18 146.5 16.6 127 29-213 14-140 (225)
235 2qma_A Diaminobutyrate-pyruvat 99.5 8.3E-14 2.8E-18 162.8 19.7 204 628-852 111-347 (497)
236 3e05_A Precorrin-6Y C5,15-meth 99.5 1.2E-13 4.1E-18 141.7 18.6 123 29-209 39-161 (204)
237 3dmg_A Probable ribosomal RNA 99.5 4.6E-14 1.6E-18 159.3 16.4 141 3-196 202-346 (381)
238 2vyc_A Biodegradative arginine 99.5 2.2E-13 7.6E-18 166.7 23.6 172 654-845 207-401 (755)
239 1y8c_A S-adenosylmethionine-de 99.5 1.1E-14 3.7E-19 153.1 9.6 193 30-326 37-242 (246)
240 4dcm_A Ribosomal RNA large sub 99.5 5.1E-14 1.7E-18 158.8 15.7 141 3-196 197-340 (375)
241 1dus_A MJ0882; hypothetical pr 99.5 6.3E-14 2.2E-18 141.3 14.8 143 3-206 27-173 (194)
242 3eey_A Putative rRNA methylase 99.5 7.2E-14 2.5E-18 142.4 15.1 117 30-190 22-139 (197)
243 3g89_A Ribosomal RNA small sub 99.5 6.9E-14 2.4E-18 148.9 15.5 146 12-215 61-211 (249)
244 3grz_A L11 mtase, ribosomal pr 99.5 4.2E-14 1.4E-18 145.2 12.8 126 30-216 60-185 (205)
245 2yky_A Beta-transaminase; tran 99.3 8.7E-16 3E-20 177.8 0.0 258 611-900 96-374 (465)
246 3njr_A Precorrin-6Y methylase; 99.5 3.2E-13 1.1E-17 139.3 19.2 125 30-215 55-179 (204)
247 3lec_A NADB-rossmann superfami 99.5 1.2E-13 4.1E-18 144.4 15.0 128 28-213 19-146 (230)
248 3gnl_A Uncharacterized protein 99.5 1.4E-13 4.7E-18 145.1 14.2 128 28-213 19-146 (244)
249 2fhp_A Methylase, putative; al 99.5 1.1E-13 3.8E-18 139.3 12.9 111 29-194 43-158 (187)
250 2esr_A Methyltransferase; stru 99.5 5.7E-14 2E-18 140.6 10.7 110 30-194 31-142 (177)
251 1xdz_A Methyltransferase GIDB; 99.5 2.4E-13 8.2E-18 143.5 15.9 127 30-214 70-200 (240)
252 1c4k_A Protein (ornithine deca 99.5 2.2E-13 7.6E-18 165.5 17.8 176 652-845 173-370 (730)
253 2frn_A Hypothetical protein PH 99.5 1E-13 3.5E-18 150.0 13.1 124 30-213 125-254 (278)
254 3dtn_A Putative methyltransfer 99.5 3.2E-13 1.1E-17 141.4 16.3 133 28-216 42-214 (234)
255 3f4k_A Putative methyltransfer 99.5 9.5E-13 3.2E-17 139.6 19.9 131 28-214 44-194 (257)
256 3tma_A Methyltransferase; thum 99.5 3.9E-13 1.3E-17 150.4 17.5 135 29-214 202-337 (354)
257 3dh0_A SAM dependent methyltra 99.5 3.9E-13 1.3E-17 139.0 16.2 130 30-214 37-179 (219)
258 1wzn_A SAM-dependent methyltra 99.5 6.4E-13 2.2E-17 140.6 18.2 107 30-192 41-147 (252)
259 3kkz_A Uncharacterized protein 99.5 6.6E-13 2.3E-17 142.1 18.2 131 28-214 44-194 (267)
260 3gu3_A Methyltransferase; alph 99.5 3.9E-13 1.3E-17 145.6 16.6 107 29-192 21-128 (284)
261 3n75_A LDC, lysine decarboxyla 99.5 1.3E-12 4.4E-17 157.7 22.4 198 654-873 197-413 (715)
262 1nkv_A Hypothetical protein YJ 99.5 3.2E-13 1.1E-17 143.2 14.9 129 29-213 35-184 (256)
263 4htf_A S-adenosylmethionine-de 99.5 6.2E-13 2.1E-17 143.7 17.2 132 30-216 68-232 (285)
264 3ocj_A Putative exported prote 99.5 1.9E-13 6.5E-18 149.6 13.2 134 30-215 118-290 (305)
265 2nxc_A L11 mtase, ribosomal pr 99.5 2.3E-13 7.8E-18 145.2 13.2 124 30-215 120-243 (254)
266 3dxy_A TRNA (guanine-N(7)-)-me 99.5 2.4E-13 8.1E-18 141.8 12.8 133 30-210 34-171 (218)
267 1o54_A SAM-dependent O-methylt 99.5 4E-13 1.4E-17 145.0 14.8 129 29-217 111-240 (277)
268 2igt_A SAM dependent methyltra 99.5 3.3E-13 1.1E-17 149.7 14.1 137 30-211 153-299 (332)
269 3mgg_A Methyltransferase; NYSG 99.5 7.9E-13 2.7E-17 142.0 16.8 133 28-215 35-197 (276)
270 1o9g_A RRNA methyltransferase; 99.5 8.9E-14 3.1E-18 147.7 9.0 130 30-189 51-213 (250)
271 1pjz_A Thiopurine S-methyltran 99.4 2.3E-13 7.9E-18 140.1 11.4 155 12-215 9-175 (203)
272 1vl5_A Unknown conserved prote 99.4 1E-12 3.5E-17 139.9 16.8 144 9-214 21-188 (260)
273 4e1o_A HDC, histidine decarbox 99.4 3.8E-12 1.3E-16 148.2 22.7 202 630-849 92-328 (481)
274 3dlc_A Putative S-adenosyl-L-m 99.4 3.3E-13 1.1E-17 138.9 12.1 128 32-214 45-201 (219)
275 3mb5_A SAM-dependent methyltra 99.4 4.2E-13 1.4E-17 142.5 13.0 127 29-215 92-221 (255)
276 1ixk_A Methyltransferase; open 99.4 1.9E-12 6.5E-17 142.6 18.2 151 30-213 118-272 (315)
277 3h2b_A SAM-dependent methyltra 99.4 9.1E-13 3.1E-17 134.7 14.6 124 31-214 42-180 (203)
278 3hem_A Cyclopropane-fatty-acyl 99.4 2.1E-12 7.3E-17 140.8 18.4 113 29-190 71-183 (302)
279 2ift_A Putative methylase HI07 99.4 4.8E-13 1.6E-17 137.5 12.2 111 30-194 53-167 (201)
280 3sm3_A SAM-dependent methyltra 99.4 9.3E-13 3.2E-17 137.2 14.4 138 30-216 30-207 (235)
281 4dmg_A Putative uncharacterize 99.4 1.4E-12 4.8E-17 147.7 16.7 136 30-213 214-354 (393)
282 3cgg_A SAM-dependent methyltra 99.4 2.8E-12 9.5E-17 129.2 17.2 128 30-216 46-175 (195)
283 3bus_A REBM, methyltransferase 99.4 2.7E-12 9.3E-17 137.4 18.0 131 29-214 60-214 (273)
284 2fpo_A Methylase YHHF; structu 99.4 7.2E-13 2.5E-17 136.3 12.9 80 30-126 54-133 (202)
285 1wy7_A Hypothetical protein PH 99.4 3.2E-12 1.1E-16 131.2 17.7 127 29-215 48-174 (207)
286 3tm4_A TRNA (guanine N2-)-meth 99.4 1.4E-12 4.9E-17 146.9 16.3 134 30-214 217-350 (373)
287 3v97_A Ribosomal RNA large sub 99.4 9.7E-13 3.3E-17 159.5 15.5 141 30-213 539-679 (703)
288 1ohv_A 4-aminobutyrate aminotr 99.4 1.7E-12 5.9E-17 150.8 17.1 263 612-900 60-393 (472)
289 2ex4_A Adrenal gland protein A 99.4 1E-12 3.5E-17 138.4 13.8 146 16-215 65-224 (241)
290 3lcc_A Putative methyl chlorid 99.4 1.8E-12 6.2E-17 135.9 15.5 132 30-216 66-207 (235)
291 3vc1_A Geranyl diphosphate 2-C 99.4 3.1E-12 1.1E-16 140.4 18.0 131 28-214 115-267 (312)
292 3g07_A 7SK snRNA methylphospha 99.4 3.4E-13 1.2E-17 146.8 10.2 162 22-215 38-268 (292)
293 2pjd_A Ribosomal RNA small sub 99.4 8E-13 2.7E-17 147.3 13.4 135 3-195 171-308 (343)
294 1ws6_A Methyltransferase; stru 99.4 5.3E-13 1.8E-17 132.1 10.6 106 30-194 41-151 (171)
295 3e23_A Uncharacterized protein 99.4 2.2E-12 7.6E-17 132.8 15.6 124 30-215 43-181 (211)
296 2b78_A Hypothetical protein SM 99.4 2E-12 6.9E-17 146.3 16.6 136 30-210 212-356 (385)
297 3a27_A TYW2, uncharacterized p 99.4 1.1E-12 3.9E-17 141.3 13.8 104 29-192 118-221 (272)
298 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.4E-12 4.7E-17 150.0 15.3 170 2-240 257-431 (433)
299 1jsx_A Glucose-inhibited divis 99.4 1.8E-12 6.1E-17 133.0 14.5 121 30-213 65-185 (207)
300 1yb2_A Hypothetical protein TA 99.4 9.3E-13 3.2E-17 142.0 13.0 126 29-215 109-236 (275)
301 2yxd_A Probable cobalt-precorr 99.4 3.6E-12 1.2E-16 127.2 16.0 120 30-213 35-154 (183)
302 3jwh_A HEN1; methyltransferase 99.4 1.1E-12 3.8E-17 135.8 12.5 136 30-213 29-189 (217)
303 3k6r_A Putative transferase PH 99.4 5.6E-13 1.9E-17 143.6 10.6 125 29-213 124-254 (278)
304 1xxl_A YCGJ protein; structura 99.4 4E-12 1.4E-16 133.9 16.9 127 30-213 21-171 (239)
305 3jwg_A HEN1, methyltransferase 99.4 2.2E-12 7.5E-17 133.6 14.3 136 30-213 29-189 (219)
306 4fsd_A Arsenic methyltransfera 99.4 1.3E-12 4.6E-17 147.7 13.5 140 29-215 82-250 (383)
307 2gb4_A Thiopurine S-methyltran 99.4 1.6E-12 5.4E-17 138.6 13.3 142 30-214 68-225 (252)
308 3m33_A Uncharacterized protein 99.4 7.9E-13 2.7E-17 138.1 10.7 117 30-214 48-165 (226)
309 3pfg_A N-methyltransferase; N, 99.4 1.3E-12 4.4E-17 139.4 12.5 100 30-189 50-150 (263)
310 3g5l_A Putative S-adenosylmeth 99.4 2.4E-12 8.1E-17 136.4 14.3 130 29-217 43-217 (253)
311 1ve3_A Hypothetical protein PH 99.4 4.1E-12 1.4E-16 131.8 15.7 106 30-191 38-143 (227)
312 2o57_A Putative sarcosine dime 99.4 4.5E-12 1.5E-16 137.7 16.6 131 29-214 81-232 (297)
313 3k40_A Aromatic-L-amino-acid d 99.4 1.1E-11 3.8E-16 144.1 21.0 200 630-848 87-320 (475)
314 2vdv_E TRNA (guanine-N(7)-)-me 99.4 1.6E-12 5.6E-17 137.7 12.7 133 30-208 49-191 (246)
315 1l3i_A Precorrin-6Y methyltran 99.4 3.6E-12 1.2E-16 128.1 14.6 124 29-211 32-155 (192)
316 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.4E-12 4.7E-17 137.6 12.0 140 30-209 46-188 (235)
317 2qm3_A Predicted methyltransfe 99.4 7.6E-12 2.6E-16 141.0 18.5 129 30-214 172-307 (373)
318 3ajd_A Putative methyltransfer 99.4 5E-12 1.7E-16 136.4 16.3 147 30-212 83-237 (274)
319 2pwy_A TRNA (adenine-N(1)-)-me 99.4 3E-12 1E-16 135.8 14.1 127 29-215 95-223 (258)
320 1kpg_A CFA synthase;, cyclopro 99.4 1.2E-11 4.2E-16 133.5 18.6 130 29-214 63-226 (287)
321 3p2e_A 16S rRNA methylase; met 99.4 1.7E-12 6E-17 135.9 11.4 136 30-214 24-183 (225)
322 2f8l_A Hypothetical protein LM 99.4 2.4E-12 8.1E-17 143.5 13.2 139 30-209 130-279 (344)
323 1zx0_A Guanidinoacetate N-meth 99.4 1.7E-12 5.9E-17 136.4 11.4 144 13-210 45-204 (236)
324 3ujc_A Phosphoethanolamine N-m 99.4 7.8E-12 2.7E-16 132.8 16.6 130 29-214 54-204 (266)
325 3l8d_A Methyltransferase; stru 99.4 5.2E-12 1.8E-16 132.5 14.7 127 30-216 53-200 (242)
326 3g2m_A PCZA361.24; SAM-depende 99.4 4.2E-12 1.4E-16 138.3 14.4 109 30-190 82-190 (299)
327 2kw5_A SLR1183 protein; struct 99.4 8.7E-12 3E-16 127.3 15.9 126 30-216 30-171 (202)
328 3dr5_A Putative O-methyltransf 99.4 2.9E-12 1E-16 133.8 12.6 121 13-189 40-162 (221)
329 2p7i_A Hypothetical protein; p 99.4 4.4E-12 1.5E-16 133.0 14.0 123 30-214 42-197 (250)
330 3thr_A Glycine N-methyltransfe 99.4 4.6E-12 1.6E-16 137.2 14.4 117 30-192 57-177 (293)
331 1wxx_A TT1595, hypothetical pr 99.3 9.8E-12 3.4E-16 140.6 17.5 135 30-211 209-351 (382)
332 3ntv_A MW1564 protein; rossman 99.3 3.8E-12 1.3E-16 133.7 12.9 104 30-189 71-175 (232)
333 2xvm_A Tellurite resistance pr 99.3 7.4E-12 2.5E-16 127.0 14.4 126 30-213 32-170 (199)
334 2okc_A Type I restriction enzy 99.3 1.3E-11 4.5E-16 142.3 18.2 194 7-250 153-366 (445)
335 3bwc_A Spermidine synthase; SA 99.3 4E-12 1.4E-16 139.2 13.2 142 30-217 95-241 (304)
336 3hnr_A Probable methyltransfer 99.3 6.6E-12 2.2E-16 129.9 14.0 124 30-213 45-198 (220)
337 3c0k_A UPF0064 protein YCCW; P 99.3 9.9E-12 3.4E-16 141.2 16.7 139 30-213 220-367 (396)
338 3m4x_A NOL1/NOP2/SUN family pr 99.3 3.8E-12 1.3E-16 146.3 13.3 152 30-213 105-260 (456)
339 3ou2_A SAM-dependent methyltra 99.3 1.5E-11 5.1E-16 126.6 16.5 124 30-213 46-202 (218)
340 3u81_A Catechol O-methyltransf 99.3 1.2E-11 4.2E-16 128.6 15.6 128 30-211 58-192 (221)
341 3m70_A Tellurite resistance pr 99.3 7.5E-12 2.6E-16 135.2 14.4 125 30-213 120-257 (286)
342 3m6w_A RRNA methylase; rRNA me 99.3 4.1E-12 1.4E-16 146.2 13.0 151 30-213 101-256 (464)
343 1nt2_A Fibrillarin-like PRE-rR 99.3 2.1E-11 7.1E-16 126.3 17.0 127 29-215 56-194 (210)
344 2p35_A Trans-aconitate 2-methy 99.3 7.8E-12 2.7E-16 132.6 14.0 102 29-191 32-133 (259)
345 2yvl_A TRMI protein, hypotheti 99.3 1.2E-11 4.1E-16 130.4 15.1 125 29-215 90-214 (248)
346 1xtp_A LMAJ004091AAA; SGPP, st 99.3 7.4E-12 2.5E-16 132.3 13.2 131 29-215 92-237 (254)
347 3e8s_A Putative SAM dependent 99.3 9.7E-12 3.3E-16 128.6 13.6 123 30-215 52-208 (227)
348 1fbn_A MJ fibrillarin homologu 99.3 1.4E-11 4.7E-16 129.1 14.8 125 29-214 73-211 (230)
349 2ih2_A Modification methylase 99.3 9E-12 3.1E-16 142.2 14.6 158 6-208 20-186 (421)
350 3ccf_A Cyclopropane-fatty-acyl 99.3 8.5E-12 2.9E-16 134.4 13.5 100 30-192 57-156 (279)
351 1ri5_A MRNA capping enzyme; me 99.3 1.5E-11 5E-16 133.1 15.4 111 30-190 64-174 (298)
352 2as0_A Hypothetical protein PH 99.3 1.3E-11 4.3E-16 140.3 15.5 136 30-210 217-360 (396)
353 2ipx_A RRNA 2'-O-methyltransfe 99.3 7.5E-12 2.6E-16 131.2 12.5 126 29-213 76-214 (233)
354 1iy9_A Spermidine synthase; ro 99.3 1.5E-11 5.2E-16 132.7 15.2 139 30-217 75-219 (275)
355 2fk8_A Methoxy mycolic acid sy 99.3 1.5E-11 5E-16 135.2 15.3 106 29-190 89-194 (318)
356 3mq2_A 16S rRNA methyltransfer 99.3 5.2E-12 1.8E-16 130.8 11.0 151 12-214 14-182 (218)
357 3fpf_A Mtnas, putative unchara 99.3 6.6E-12 2.3E-16 135.7 12.1 105 28-192 120-224 (298)
358 3bkw_A MLL3908 protein, S-aden 99.3 1.4E-11 4.6E-16 129.3 14.2 126 30-215 43-213 (243)
359 2pt6_A Spermidine synthase; tr 99.3 1.1E-11 3.6E-16 136.9 14.0 138 30-216 116-259 (321)
360 3adn_A Spermidine synthase; am 99.3 9.4E-12 3.2E-16 135.6 13.3 142 30-217 83-228 (294)
361 3bt7_A TRNA (uracil-5-)-methyl 99.3 6.5E-12 2.2E-16 141.4 12.2 78 31-126 214-306 (369)
362 4df3_A Fibrillarin-like rRNA/T 99.3 1.6E-11 5.5E-16 128.7 14.3 129 28-214 75-215 (233)
363 3orh_A Guanidinoacetate N-meth 99.3 3.3E-12 1.1E-16 134.7 9.2 110 29-189 59-169 (236)
364 3gdh_A Trimethylguanosine synt 99.3 6.3E-12 2.1E-16 132.3 11.3 80 30-128 78-157 (241)
365 3tfw_A Putative O-methyltransf 99.3 1.2E-11 4.2E-16 131.2 13.3 106 30-191 63-171 (248)
366 3dli_A Methyltransferase; PSI- 99.3 1.8E-11 6.1E-16 128.8 14.2 124 29-214 40-182 (240)
367 3uwp_A Histone-lysine N-methyl 99.3 1E-11 3.5E-16 138.9 12.8 108 29-189 172-287 (438)
368 2yx1_A Hypothetical protein MJ 99.3 6.3E-12 2.1E-16 139.7 11.1 118 30-212 195-313 (336)
369 2yqz_A Hypothetical protein TT 99.3 1.3E-11 4.5E-16 130.9 13.2 104 29-190 38-141 (263)
370 3duw_A OMT, O-methyltransferas 99.3 2.3E-11 8E-16 126.3 14.6 106 30-191 58-168 (223)
371 3lkd_A Type I restriction-modi 99.3 1.4E-10 4.9E-15 136.1 22.9 199 7-242 199-409 (542)
372 2frx_A Hypothetical protein YE 99.3 1.7E-11 6E-16 142.1 14.9 146 30-207 117-266 (479)
373 4hg2_A Methyltransferase type 99.3 5.9E-12 2E-16 134.6 9.8 108 17-191 29-136 (257)
374 3tr6_A O-methyltransferase; ce 99.3 7.2E-12 2.5E-16 130.2 10.2 105 30-190 64-174 (225)
375 3c3p_A Methyltransferase; NP_9 99.3 1.3E-11 4.5E-16 127.2 12.0 104 30-190 56-160 (210)
376 3g5t_A Trans-aconitate 3-methy 99.3 1.9E-11 6.3E-16 133.2 13.8 105 30-188 36-147 (299)
377 2gpy_A O-methyltransferase; st 99.3 1.2E-11 3.9E-16 129.7 11.5 105 30-190 54-160 (233)
378 2a14_A Indolethylamine N-methy 99.3 1.2E-11 4E-16 132.5 11.7 166 12-215 39-237 (263)
379 3bxo_A N,N-dimethyltransferase 99.3 4.7E-11 1.6E-15 124.8 15.4 101 30-189 40-140 (239)
380 3lbf_A Protein-L-isoaspartate 99.3 2.4E-11 8.2E-16 124.9 12.9 101 29-192 76-176 (210)
381 2yxl_A PH0851 protein, 450AA l 99.3 6.4E-11 2.2E-15 136.7 17.7 152 30-213 259-416 (450)
382 3q7e_A Protein arginine N-meth 99.3 1.8E-11 6.3E-16 136.6 12.7 107 29-188 65-171 (349)
383 1i9g_A Hypothetical protein RV 99.3 2.3E-11 7.8E-16 130.9 13.0 128 29-215 98-229 (280)
384 1ne2_A Hypothetical protein TA 99.3 4.8E-11 1.6E-15 121.8 14.6 118 29-213 50-167 (200)
385 2jjq_A Uncharacterized RNA met 99.3 3.1E-11 1.1E-15 138.0 14.5 98 3-126 265-364 (425)
386 1sui_A Caffeoyl-COA O-methyltr 99.2 2.4E-11 8.2E-16 129.0 12.1 105 30-190 79-190 (247)
387 1qzz_A RDMB, aclacinomycin-10- 99.2 4.7E-11 1.6E-15 134.2 15.1 131 29-214 181-337 (374)
388 3ofk_A Nodulation protein S; N 99.2 1.2E-11 4.1E-16 127.6 9.4 104 30-190 51-154 (216)
389 1inl_A Spermidine synthase; be 99.2 2.1E-11 7.2E-16 133.0 11.7 137 30-215 90-233 (296)
390 3gjy_A Spermidine synthase; AP 99.2 2.4E-11 8.3E-16 132.9 12.1 133 32-215 91-227 (317)
391 3i9f_A Putative type 11 methyl 99.2 2.4E-11 8.1E-16 120.5 11.1 118 30-214 17-146 (170)
392 2r3s_A Uncharacterized protein 99.2 7.2E-11 2.4E-15 130.4 16.1 131 30-214 165-321 (335)
393 1xj5_A Spermidine synthase 1; 99.2 2.6E-11 8.7E-16 134.4 12.4 115 30-192 120-237 (334)
394 2fyt_A Protein arginine N-meth 99.2 3.2E-11 1.1E-15 134.1 12.9 106 29-188 63-169 (340)
395 3khk_A Type I restriction-modi 99.2 8.2E-11 2.8E-15 138.4 16.7 199 7-243 227-448 (544)
396 3i53_A O-methyltransferase; CO 99.2 1.4E-10 4.7E-15 128.4 17.4 130 30-214 169-319 (332)
397 1g8a_A Fibrillarin-like PRE-rR 99.2 1.1E-10 3.6E-15 121.8 15.5 126 29-214 72-210 (227)
398 2i62_A Nicotinamide N-methyltr 99.2 5.2E-11 1.8E-15 126.5 13.4 151 29-215 55-238 (265)
399 2pxx_A Uncharacterized protein 99.2 1E-11 3.6E-16 127.3 7.7 135 29-208 41-175 (215)
400 2o07_A Spermidine synthase; st 99.2 3.9E-11 1.3E-15 131.4 12.6 115 30-192 95-211 (304)
401 3bkx_A SAM-dependent methyltra 99.2 5.1E-11 1.7E-15 127.6 13.3 82 29-126 42-133 (275)
402 3r0q_C Probable protein argini 99.2 4.6E-11 1.6E-15 134.7 13.5 106 28-188 61-167 (376)
403 2avd_A Catechol-O-methyltransf 99.2 2.9E-11 9.9E-16 126.0 11.0 105 30-190 69-179 (229)
404 2ar0_A M.ecoki, type I restric 99.2 1E-10 3.4E-15 137.9 16.8 189 7-242 151-363 (541)
405 3s1s_A Restriction endonucleas 99.2 1.1E-10 3.7E-15 139.4 17.0 245 29-306 320-581 (878)
406 3bzb_A Uncharacterized protein 99.2 6.9E-11 2.4E-15 127.9 14.1 155 16-217 66-238 (281)
407 3id6_C Fibrillarin-like rRNA/T 99.2 1.5E-10 5E-15 121.6 16.0 129 28-214 74-214 (232)
408 3gwz_A MMCR; methyltransferase 99.2 1E-10 3.5E-15 131.5 15.8 132 29-215 201-355 (369)
409 3fzg_A 16S rRNA methylase; met 99.2 1.5E-11 5.1E-16 123.8 7.8 87 13-121 35-121 (200)
410 1mjf_A Spermidine synthase; sp 99.2 3.2E-11 1.1E-15 130.5 11.1 141 30-215 75-221 (281)
411 1x19_A CRTF-related protein; m 99.2 1.4E-10 4.6E-15 129.9 16.5 131 29-214 189-346 (359)
412 3r3h_A O-methyltransferase, SA 99.2 6.3E-12 2.2E-16 133.1 5.3 104 30-189 60-169 (242)
413 3ldu_A Putative methylase; str 99.2 7.6E-11 2.6E-15 133.3 14.4 82 29-127 194-313 (385)
414 2b2c_A Spermidine synthase; be 99.2 4.3E-11 1.5E-15 131.5 12.0 137 30-216 108-251 (314)
415 3ldg_A Putative uncharacterize 99.2 1.2E-10 4.3E-15 131.2 15.9 82 29-127 193-312 (384)
416 2pbf_A Protein-L-isoaspartate 99.2 3.8E-11 1.3E-15 125.1 10.9 108 29-192 79-195 (227)
417 3mcz_A O-methyltransferase; ad 99.2 1.5E-10 5.2E-15 129.0 16.5 131 31-213 180-336 (352)
418 3dp7_A SAM-dependent methyltra 99.2 6.1E-11 2.1E-15 133.1 13.3 130 30-213 179-339 (363)
419 3k0b_A Predicted N6-adenine-sp 99.2 9.4E-11 3.2E-15 132.7 14.7 82 29-127 200-319 (393)
420 3b3j_A Histone-arginine methyl 99.2 1.6E-11 5.3E-16 142.7 8.4 107 29-190 157-263 (480)
421 2yxe_A Protein-L-isoaspartate 99.2 5.7E-11 2E-15 122.5 11.6 104 29-193 76-180 (215)
422 1g6q_1 HnRNP arginine N-methyl 99.2 6.5E-11 2.2E-15 131.0 12.8 106 30-188 38-143 (328)
423 4hc4_A Protein arginine N-meth 99.2 4.2E-11 1.4E-15 134.3 11.3 107 28-188 81-187 (376)
424 3c3y_A Pfomt, O-methyltransfer 99.2 5.1E-11 1.7E-15 125.6 11.3 105 30-190 70-181 (237)
425 1sqg_A SUN protein, FMU protei 99.2 1.1E-10 3.7E-15 134.1 14.9 149 30-211 246-399 (429)
426 2p8j_A S-adenosylmethionine-de 99.2 9.6E-11 3.3E-15 119.9 12.9 122 12-192 9-130 (209)
427 3ege_A Putative methyltransfer 99.2 2.6E-11 8.8E-16 129.5 8.8 122 30-216 34-178 (261)
428 1i1n_A Protein-L-isoaspartate 99.2 9.3E-11 3.2E-15 122.0 12.8 109 29-193 76-185 (226)
429 1tw3_A COMT, carminomycin 4-O- 99.2 1.5E-10 5.1E-15 129.4 15.3 132 29-215 182-338 (360)
430 3dou_A Ribosomal RNA large sub 99.2 7E-11 2.4E-15 120.5 11.4 132 29-217 24-165 (191)
431 1r18_A Protein-L-isoaspartate( 99.2 7.1E-11 2.4E-15 123.2 11.2 108 29-192 83-196 (227)
432 1dl5_A Protein-L-isoaspartate 99.2 6.7E-11 2.3E-15 130.2 11.5 103 29-192 74-177 (317)
433 1jg1_A PIMT;, protein-L-isoasp 99.2 7.3E-11 2.5E-15 123.9 11.3 104 29-194 90-193 (235)
434 2g72_A Phenylethanolamine N-me 99.2 2.6E-10 8.7E-15 123.5 15.8 151 30-215 71-255 (289)
435 2y1w_A Histone-arginine methyl 99.2 1.3E-10 4.4E-15 129.7 13.5 107 29-190 49-155 (348)
436 2plw_A Ribosomal RNA methyltra 99.2 2.3E-10 7.8E-15 116.6 14.3 129 29-213 21-176 (201)
437 2aot_A HMT, histamine N-methyl 99.2 2.1E-10 7.1E-15 124.5 14.7 132 30-213 52-218 (292)
438 1uir_A Polyamine aminopropyltr 99.2 1.3E-10 4.3E-15 128.0 12.9 140 30-215 77-224 (314)
439 2b25_A Hypothetical protein; s 99.2 1.7E-10 5.9E-15 127.9 14.1 122 29-205 104-234 (336)
440 2i7c_A Spermidine synthase; tr 99.2 1.1E-10 3.6E-15 126.6 11.8 140 30-216 78-221 (283)
441 1ej0_A FTSJ; methyltransferase 99.2 1.2E-10 4.1E-15 115.0 11.3 130 29-214 21-159 (180)
442 3ggd_A SAM-dependent methyltra 99.1 6.9E-11 2.3E-15 124.5 9.8 114 28-198 54-171 (245)
443 3cc8_A Putative methyltransfer 99.1 1.6E-10 5.5E-15 119.5 12.4 122 30-214 32-183 (230)
444 2ip2_A Probable phenazine-spec 99.1 2.8E-10 9.7E-15 125.8 14.9 128 32-214 169-320 (334)
445 2dul_A N(2),N(2)-dimethylguano 99.1 9.5E-11 3.3E-15 131.9 11.1 103 30-190 47-164 (378)
446 4a6d_A Hydroxyindole O-methylt 99.1 5.1E-10 1.8E-14 125.1 16.1 129 30-214 179-332 (353)
447 2hnk_A SAM-dependent O-methylt 99.1 1.2E-10 4.1E-15 122.6 10.1 105 30-190 60-181 (239)
448 3cbg_A O-methyltransferase; cy 99.1 1.7E-10 5.7E-15 121.2 11.0 105 30-190 72-182 (232)
449 1af7_A Chemotaxis receptor met 99.1 9.2E-11 3.2E-15 126.3 8.9 128 30-193 105-255 (274)
450 1u2z_A Histone-lysine N-methyl 99.1 3.2E-10 1.1E-14 129.2 13.4 108 29-189 241-358 (433)
451 4e2x_A TCAB9; kijanose, tetron 99.1 9E-10 3.1E-14 125.6 17.2 125 29-213 106-250 (416)
452 1vbf_A 231AA long hypothetical 99.1 2.3E-10 8E-15 119.3 11.3 100 29-193 69-168 (231)
453 2vdw_A Vaccinia virus capping 99.1 2.1E-10 7.1E-15 125.5 11.3 117 30-192 48-171 (302)
454 3iv6_A Putative Zn-dependent a 99.1 4.4E-10 1.5E-14 120.0 13.3 108 29-193 44-151 (261)
455 2gs9_A Hypothetical protein TT 99.1 2.7E-10 9.2E-15 117.0 10.8 100 30-194 36-136 (211)
456 2bm8_A Cephalosporin hydroxyla 99.1 9.9E-11 3.4E-15 123.4 7.6 120 30-211 81-214 (236)
457 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.9E-09 6.4E-14 118.2 17.8 148 30-211 102-260 (309)
458 1vlm_A SAM-dependent methyltra 99.1 5.1E-10 1.8E-14 115.9 12.0 119 31-217 48-189 (219)
459 3bgv_A MRNA CAP guanine-N7 met 99.1 4.9E-10 1.7E-14 122.8 12.4 120 30-193 34-158 (313)
460 3v97_A Ribosomal RNA large sub 99.1 1.3E-09 4.5E-14 132.1 16.8 132 29-213 189-363 (703)
461 2nyu_A Putative ribosomal RNA 99.1 9.3E-10 3.2E-14 111.4 13.0 131 29-214 21-168 (196)
462 1zq9_A Probable dimethyladenos 99.0 2.3E-10 8E-15 124.0 8.6 78 30-127 28-105 (285)
463 2qe6_A Uncharacterized protein 99.0 1.5E-09 5E-14 117.0 14.6 108 31-192 78-198 (274)
464 3htx_A HEN1; HEN1, small RNA m 99.0 8.5E-10 2.9E-14 131.8 13.3 134 5-191 698-835 (950)
465 3lst_A CALO1 methyltransferase 99.0 4.2E-10 1.4E-14 125.4 10.2 129 29-215 183-335 (348)
466 1p91_A Ribosomal RNA large sub 99.0 6E-10 2.1E-14 119.0 10.8 98 30-194 85-182 (269)
467 2h1r_A Dimethyladenosine trans 99.0 6E-10 2E-14 121.7 10.9 90 12-127 29-118 (299)
468 3axs_A Probable N(2),N(2)-dime 99.0 5.3E-10 1.8E-14 126.0 10.5 105 30-191 52-159 (392)
469 2xyq_A Putative 2'-O-methyl tr 99.0 9.5E-10 3.2E-14 119.1 11.4 127 28-214 61-195 (290)
470 3bc8_A O-phosphoseryl-tRNA(SEC 99.0 1.6E-08 5.5E-13 115.6 21.7 205 651-873 97-309 (450)
471 3opn_A Putative hemolysin; str 99.0 8.5E-10 2.9E-14 116.0 10.4 45 29-74 36-80 (232)
472 2avn_A Ubiquinone/menaquinone 99.0 7.1E-10 2.4E-14 118.1 9.2 101 30-192 54-154 (260)
473 2qfm_A Spermine synthase; sper 99.0 1.9E-09 6.5E-14 119.3 12.7 143 29-213 187-339 (364)
474 3reo_A (ISO)eugenol O-methyltr 99.0 3.7E-09 1.3E-13 118.8 14.7 124 29-215 202-354 (368)
475 3lcv_B Sisomicin-gentamicin re 99.0 1.6E-09 5.5E-14 113.8 10.8 142 13-213 118-269 (281)
476 3ufb_A Type I restriction-modi 99.0 9.3E-09 3.2E-13 120.7 18.3 190 7-245 199-417 (530)
477 3gru_A Dimethyladenosine trans 99.0 1.6E-09 5.3E-14 117.8 10.5 77 30-127 50-126 (295)
478 3hp7_A Hemolysin, putative; st 98.9 2.6E-09 9E-14 115.5 11.9 138 16-217 72-233 (291)
479 1yub_A Ermam, rRNA methyltrans 98.9 4.5E-11 1.5E-15 126.6 -1.9 95 8-128 12-106 (245)
480 3tqs_A Ribosomal RNA small sub 98.9 1.2E-09 4.2E-14 116.3 9.2 89 12-126 16-107 (255)
481 2cmg_A Spermidine synthase; tr 98.9 1.3E-09 4.6E-14 116.6 9.0 123 30-215 72-199 (262)
482 3hl2_A O-phosphoseryl-tRNA(SEC 98.9 3.7E-08 1.3E-12 111.6 20.9 181 656-856 121-310 (501)
483 3p9c_A Caffeic acid O-methyltr 98.9 3.9E-09 1.3E-13 118.4 12.6 124 29-215 200-352 (364)
484 3ll7_A Putative methyltransfer 98.9 8E-10 2.7E-14 124.9 6.4 80 31-128 94-176 (410)
485 2r6z_A UPF0341 protein in RSP 98.9 6.6E-10 2.2E-14 118.7 5.0 81 30-127 83-173 (258)
486 1fp1_D Isoliquiritigenin 2'-O- 98.9 3.2E-09 1.1E-13 119.4 10.9 124 29-215 208-359 (372)
487 3fut_A Dimethyladenosine trans 98.9 1.6E-09 5.6E-14 116.3 8.1 76 30-127 47-122 (271)
488 1qam_A ERMC' methyltransferase 98.9 4.3E-09 1.5E-13 111.4 10.1 77 29-126 29-105 (244)
489 2zfu_A Nucleomethylin, cerebra 98.9 7.4E-09 2.5E-13 106.6 11.5 108 30-213 67-176 (215)
490 1fp2_A Isoflavone O-methyltran 98.9 4.5E-09 1.5E-13 117.2 10.4 123 30-215 188-340 (352)
491 3sso_A Methyltransferase; macr 98.9 4.9E-09 1.7E-13 117.1 10.2 96 30-189 216-323 (419)
492 2wa2_A Non-structural protein 98.8 1.8E-09 6.1E-14 116.4 5.8 116 28-196 80-199 (276)
493 2oxt_A Nucleoside-2'-O-methylt 98.8 2.1E-09 7.3E-14 115.2 4.9 115 29-196 73-191 (265)
494 3frh_A 16S rRNA methylase; met 98.8 2.1E-08 7.2E-13 104.5 12.2 83 13-121 92-174 (253)
495 1m6y_A S-adenosyl-methyltransf 98.8 7.8E-09 2.7E-13 112.7 8.8 80 30-126 26-109 (301)
496 3uzu_A Ribosomal RNA small sub 98.8 1.3E-08 4.5E-13 109.8 9.4 90 12-126 29-125 (279)
497 3e77_A Phosphoserine aminotran 98.8 3.4E-08 1.2E-12 111.1 13.2 185 627-846 22-222 (377)
498 1zg3_A Isoflavanone 4'-O-methy 98.8 1.2E-08 4E-13 114.1 9.0 123 30-215 193-346 (358)
499 3giw_A Protein of unknown func 98.7 5E-08 1.7E-12 104.3 13.0 111 32-193 80-203 (277)
500 4ao9_A Beta-phenylalanine amin 98.7 4.2E-07 1.4E-11 104.6 21.5 259 611-900 83-360 (454)
No 1
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=6.6e-36 Score=338.27 Aligned_cols=295 Identities=15% Similarity=0.202 Sum_probs=245.1
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
+++++..++.+.+..+...... ....++++|+|+.|+|++++|+.+.+++.+.+.. |....|.+++|+++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~ 82 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALE-LRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFR 82 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHH-HHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHH-HHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4566777888887766642111 1124678999999999998889999998887753 4445688999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|++.+++ +|++|+|+++++..++.++++|||+|+++.|+|+.|...++..|++++.++++++++|.+|++++++++
T Consensus 83 ~~~g~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 161 (385)
T 1b5p_A 83 RENGLSVTPE-ETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI 161 (385)
T ss_dssp HTTCCCCCGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTC
T ss_pred HHhCCCCChH-HEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhc
Confidence 9899887777 999999999999999999999999999999999999999999999999999986567899999999998
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ ++|++++|+ ||||.++|.+++++|+++|+++|++||+||+|+++.|++ .. .+ +..++. ++++
T Consensus 162 ~~~~-~~v~~~~p~-NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~--~~----~~~~~~-----~~~i 227 (385)
T 1b5p_A 162 TPRT-KALVVNSPN-NPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EH--FS----PGRVAP-----EHTL 227 (385)
T ss_dssp CTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CC--CC----GGGTCT-----TTEE
T ss_pred CCCC-EEEEEeCCC-CCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CC--CC----HHHcCC-----CCEE
Confidence 7665 589999998 999999999999999999999999999999999988876 32 11 222221 4799
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.||++|+|+||++++++ +++.+..... ..+++.+.|.++..+|+ .. +.-.++++++++.|+++++.
T Consensus 228 ~~~s~SK~~~~~G~RiG~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~--~~~~~~~~~~~~~~~~~~~~ 302 (385)
T 1b5p_A 228 TVNGAAKAFAMTGWRIGYACGPKE-VIKAMASVSRQSTTSPDTIAQWATLEALT--NQ--EASRAFVEMAREAYRRRRDL 302 (385)
T ss_dssp EEEESTTTTTCGGGCCEEEECCHH-HHHHHHHHHHTTTCSCCHHHHHHHHHHHH--CH--HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEechhhcCCcccceEEEEeCHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHh--CC--CcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 9888877543 56788999999999994 20 00135788888899998887
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 303 l~ 304 (385)
T 1b5p_A 303 LL 304 (385)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 2
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=2e-35 Score=337.60 Aligned_cols=300 Identities=13% Similarity=0.031 Sum_probs=231.4
Q ss_pred hhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC---C--CCCcHHHHHHHHHHH-H-----ccCCCCCchHHHHHH
Q 043334 589 TEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQS---F--LPIPSLVKAAIFESF-A-----RQNMSESEIDVTPSI 657 (903)
Q Consensus 589 ~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p---~--~~~p~~v~~al~~al-~-----~y~~~~G~~~lr~al 657 (903)
.++..++++.+..+....+ ....+++|+|++|.+ + +++++.+.++.. .+ . +|.+..|.+++|+++
T Consensus 6 ~~~~~~~~~~i~~~~~~~~---~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~ai 81 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFK---EDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLT 81 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHT---TSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHH
T ss_pred hcCCCCCCChHHHHHHHHh---cCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHH
Confidence 4667778888777775432 134578999999973 2 346788888866 43 1 367788999999999
Q ss_pred HHHHHhhcCCCCCCCC-cEEecCchHHHHHHHHHHhcc--CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccC
Q 043334 658 QQYIKSNFGFPIDINA-EFIYADCSQSLFNKLVLCCIL--EGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMT 734 (903)
Q Consensus 658 a~~l~~~~G~~~~pe~-~I~vt~Gs~~al~~ll~~l~~--pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld 734 (903)
++++.+.++....+++ +|++|+|+++++..++.++++ | |+|++++|+|+.|...++..|++++.+|+.++++|.+|
T Consensus 82 a~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 160 (405)
T 3k7y_A 82 QNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDIN 160 (405)
T ss_dssp HHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEEC
T ss_pred HHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcC
Confidence 9999876666555552 369999999999999999988 8 99999999999999999999999999999544579999
Q ss_pred HHHHHHHhhcC-CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc
Q 043334 735 EKTLVTILETV-KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS 813 (903)
Q Consensus 735 ~~~L~~~l~~~-~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~ 813 (903)
++.+++.+++. .++++++++|.|||||.++|.+++++|+++|+++|++||+||+|.++.|++...+..+ +..+..
T Consensus 161 ~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~----~~~~~~ 236 (405)
T 3k7y_A 161 YDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLL----IRKFEE 236 (405)
T ss_dssp HHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHH----HHHHHT
T ss_pred HHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHH----HHHHHh
Confidence 99999998753 2346766665359999999999999999999999999999999999988642211111 222222
Q ss_pred CCCCCCceEEEccCchhcccccceeeEEEe--CcHHHHHHHH----hCC--CCCCCcHHHHHHHHHHHhcccc-cchhHH
Q 043334 814 STNSSFNVSLLGGLSLKMLTGALKFGFLVL--NHPQLVDAFS----SFP--GLSKPHSTVRYAIKKLLGLRER-KARDLM 884 (903)
Q Consensus 814 ~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~--~~~~li~~l~----~~~--~~~~~s~~~Q~aa~~~L~~~~~-~~~~~~ 884 (903)
. .+++|+++||||+|+++|||+||+++ +++++++.+. +.. ..++++...|.++..+|. ++ ..+.+.
T Consensus 237 ~---~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~~l~~~~~ 311 (405)
T 3k7y_A 237 K---NIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLN--NQNLKLNWI 311 (405)
T ss_dssp T---TCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH--CHHHHHHHH
T ss_pred c---CCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhC--CHHHHHHHH
Confidence 2 15899999999999999999999864 4444655543 222 255678899999999995 22 113356
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 043334 885 NAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 885 ~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.++++.|++||+.++
T Consensus 312 ~~l~~~~~~~~~~R~~l~ 329 (405)
T 3k7y_A 312 KELSQLSQRITNNRILFF 329 (405)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 778888999999999885
No 3
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=8.6e-34 Score=320.97 Aligned_cols=298 Identities=15% Similarity=0.179 Sum_probs=245.3
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhh
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSN 664 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~ 664 (903)
++++..++++++..+...........++++|+|+.|++++++|+.+.+++.+.+. .|....|..++++++++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~ 82 (396)
T 3jtx_A 3 NTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRR 82 (396)
T ss_dssp HHHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred hhhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHh
Confidence 5566778888888777543322235688999999999999999999999988754 3566678899999999999999
Q ss_pred cCCC-CCCCCcEEecCchHHHHHHHHHHhccCC-----CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHH
Q 043334 665 FGFP-IDINAEFIYADCSQSLFNKLVLCCILEG-----GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTL 738 (903)
Q Consensus 665 ~G~~-~~pe~~I~vt~Gs~~al~~ll~~l~~pG-----D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L 738 (903)
+|.+ .+++++|++|+|+++++..++.+++++| |.|+++.|+|..+...++..|++++.++++ +++|.+|++++
T Consensus 83 ~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~g~~~d~~~l 161 (396)
T 3jtx_A 83 YDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCP-APSFNPDWRSI 161 (396)
T ss_dssp TTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECC-TTTCCCCGGGS
T ss_pred cCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecC-CCCCccCHHHH
Confidence 9986 5554489999999999999999999997 799999999999999999999999999994 46888999999
Q ss_pred HHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCC
Q 043334 739 VTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSS 818 (903)
Q Consensus 739 ~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~ 818 (903)
++++++++ +++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.+++... .+.......+... .
T Consensus 162 ~~~~~~~~-~~v~l~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~~---~ 234 (396)
T 3jtx_A 162 SEEVWKRT-KLVFVCSPN-NPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKP--LGCLQAAAQLGRS---R 234 (396)
T ss_dssp CHHHHHTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCC--CCHHHHHHHTTCC---C
T ss_pred HHhhccCc-EEEEEECCC-CCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--chHHhhhhhcccc---c
Confidence 99888766 589999997 999999999999999999999999999999999998887321 2211111112211 1
Q ss_pred CceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHH
Q 043334 819 FNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLES 896 (903)
Q Consensus 819 ~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~ 896 (903)
+++++++||||.|+++|+|+||++++++ +++.+..... ..+++.+.|.++..+|. .. +++.+.++.+++
T Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~------~~~~~~~~~~~~ 305 (396)
T 3jtx_A 235 QKLLMFTSLSKRSNVPGLRSGFVAGDAE-LLKNFLLYRTYHGSAMSIPVQRASIAAWD--DE------QHVIDNRRLYQE 305 (396)
T ss_dssp TTEEEEEESTTTSSCGGGCCEEEEECHH-HHHHHHHHHHHHTCCCCHHHHHHHHHHHH--CC------HHHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcccceEEEEeCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHhC--CH------HHHHHHHHHHHH
Confidence 5899999999999999999999999887 9998887654 67789999999999995 22 567788888888
Q ss_pred HHHHHh
Q 043334 897 RSKRLK 902 (903)
Q Consensus 897 Rr~~l~ 902 (903)
+++.+.
T Consensus 306 ~~~~l~ 311 (396)
T 3jtx_A 306 KFERVI 311 (396)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 4
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=3.6e-33 Score=319.72 Aligned_cols=301 Identities=13% Similarity=0.060 Sum_probs=236.9
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCC---CCCCCCc--HHHHHHHHHHHHc-----cCCCCCchHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVD---QSFLPIP--SLVKAAIFESFAR-----QNMSESEIDVTPS 656 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g---~p~~~~p--~~v~~al~~al~~-----y~~~~G~~~lr~a 656 (903)
+++++..++++.+..+..... ....+++|||++| +|+.++| +.+.+++.+.+.. |....|.+++|++
T Consensus 24 ~~~~~~~~~~~~i~~~~~~~~---~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 100 (420)
T 4f4e_A 24 LFSAVELAPRDPILGLNEAFN---ADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDAS 100 (420)
T ss_dssp TTTTCCCCCCCHHHHHHHHHH---HCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHH
T ss_pred HhhcCCcCCCChHHHHHHHHH---hcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHH
Confidence 677889999999988875432 1345689999999 6766544 8999999888764 4556789999999
Q ss_pred HHHHHHhhcCCCCCCCC-cEEecCchHHHHHHH--HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCccc
Q 043334 657 IQQYIKSNFGFPIDINA-EFIYADCSQSLFNKL--VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKM 733 (903)
Q Consensus 657 la~~l~~~~G~~~~pe~-~I~vt~Gs~~al~~l--l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~l 733 (903)
+++++....+...+++. +|++|+|+++++..+ +.++++|||+|++++|+|.+|...++..|++++.+|+.++++|.+
T Consensus 101 ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 180 (420)
T 4f4e_A 101 VQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGV 180 (420)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEE
T ss_pred HHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCcc
Confidence 99999876554334432 699999999999998 456789999999999999999999999999999999954457889
Q ss_pred CHHHHHHHhh---cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhh
Q 043334 734 TEKTLVTILE---TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSK 810 (903)
Q Consensus 734 d~~~L~~~l~---~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~ 810 (903)
|++.+++.++ +++ .++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .. .+..
T Consensus 181 d~~~l~~~l~~~~~~~-~~v~i~~p~-NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~-~~----~~~~ 253 (420)
T 4f4e_A 181 NFDGMLAALNGYEPGT-IVVLHACCH-NPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEAD-AA----AVRL 253 (420)
T ss_dssp CHHHHHHHHTTCCTTC-EEEEECSSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGG-GH----HHHH
T ss_pred CHHHHHHHHHhCCCCC-EEEEeCCCC-CCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchh-hH----HHHH
Confidence 9999999997 333 488888997 999999999999999999999999999999999999875321 01 1222
Q ss_pred hccCCCCCCceEEEccCchhcccccceeeEEEe--CcHHHHHHH----HhC--CCCCCCcHHHHHHHHHHHhccccc-ch
Q 043334 811 LYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL--NHPQLVDAF----SSF--PGLSKPHSTVRYAIKKLLGLRERK-AR 881 (903)
Q Consensus 811 l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~--~~~~li~~l----~~~--~~~~~~s~~~Q~aa~~~L~~~~~~-~~ 881 (903)
+.... +++++++||||+||++|+|+||+++ ++.++++.+ ... ...++++...|.++..+|. ++. .+
T Consensus 254 ~~~~~---~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~l~~ 328 (420)
T 4f4e_A 254 FAAAN---LNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLA--SPELRA 328 (420)
T ss_dssp HHHTT---CCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHH--CHHHHH
T ss_pred HHhcC---CCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhc--CHHHHH
Confidence 22222 5899999999999999999999864 444455443 222 2356678899999998884 221 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 043334 882 DLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 882 ~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.++++++++++.|++|++.+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~l~ 349 (420)
T 4f4e_A 329 SWVQELGEMRDRIRAMRNGLV 349 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 245778999999999999875
No 5
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.8e-33 Score=321.25 Aligned_cols=298 Identities=9% Similarity=0.123 Sum_probs=246.1
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc------cCCCCCchHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR------QNMSESEIDVTPSIQQY 660 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~------y~~~~G~~~lr~ala~~ 660 (903)
+++++..++++.++.+..... ++++|+|+.|+|++++|+.+.+++.+.+.. |....|.++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 79 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKLAS------EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASF 79 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHHHH------TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHH
T ss_pred HHHHhhccCccHHHHHHHHhh------cCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHH
Confidence 456777888888888775432 358999999999999999999999988753 44456889999999999
Q ss_pred HHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCC----------CCC
Q 043334 661 IKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTES----------EVG 730 (903)
Q Consensus 661 l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~----------~~~ 730 (903)
+.+.+|.+.+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.++++. +++
T Consensus 80 ~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~ 159 (422)
T 3fvs_A 80 FGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSN 159 (422)
T ss_dssp HHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGG
T ss_pred HHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccC
Confidence 9999998887623899999999999999999999999999999999999999999999999999975 246
Q ss_pred cccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhh
Q 043334 731 FKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSK 810 (903)
Q Consensus 731 f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~ 810 (903)
|.+|++++++++++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|+++.|++... .+ +..
T Consensus 160 ~~~d~~~l~~~~~~~~-~~v~~~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~----~~~ 231 (422)
T 3fvs_A 160 WQLDPMELAGKFTSRT-KALVLNTPN-NPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQH--IS----IAS 231 (422)
T ss_dssp SBCCHHHHHTTCCTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC--CC----GGG
T ss_pred CCCCHHHHHhhcCCCc-eEEEECCCC-CCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCC--CC----hhh
Confidence 8899999999998765 589999998 999999999999999999999999999999999999987543 11 222
Q ss_pred hccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHH
Q 043334 811 LYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVA 888 (903)
Q Consensus 811 l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~ 888 (903)
++.. .+++++++||||.||++|+|+||++++++ +++.+..... ..+++.+.|.++..+|...........++++
T Consensus 232 ~~~~---~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 307 (422)
T 3fvs_A 232 LPGM---WERTLTIGSAGKTFSATGWKVGWVLGPDH-IMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFV 307 (422)
T ss_dssp STTT---GGGEEEEEEHHHHHTCGGGCCEEEECCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHH
T ss_pred cccc---cCcEEEEecchhccCCccceEEEEEeCHH-HHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHH
Confidence 2221 15899999999999999999999999987 8888876543 6778899999999999410000001235677
Q ss_pred HHHHHHHHHHHHHh
Q 043334 889 EHIRNLESRSKRLK 902 (903)
Q Consensus 889 ~~r~~y~~Rr~~l~ 902 (903)
++++.++++++.+.
T Consensus 308 ~~~~~~~~~~~~l~ 321 (422)
T 3fvs_A 308 QFPQAMQRCRDHMI 321 (422)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888888764
No 6
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.1e-32 Score=311.42 Aligned_cols=293 Identities=17% Similarity=0.244 Sum_probs=243.6
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
+|+++..++++.+..+..... ..++.|+|+.|.+++++++.+.+++.+.+.. |....|..++++++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~ 77 (389)
T 1gd9_A 3 LSDRLELVSASEIRKLFDIAA-----GMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLK 77 (389)
T ss_dssp HHHHHHHSCCCHHHHHHHHHH-----TCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhHhHhCChhHHHHHHHHHh-----hhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHH
Confidence 467777888888887775332 1257999999999988899999999888754 4445578999999999999
Q ss_pred hhcCCCCCCCCc-EEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHH
Q 043334 663 SNFGFPIDINAE-FIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTI 741 (903)
Q Consensus 663 ~~~G~~~~pe~~-I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~ 741 (903)
+.+|.+.+++ + |++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+|++.+++|.+|++++++.
T Consensus 78 ~~~g~~~~~~-~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 156 (389)
T 1gd9_A 78 KQNGIEADPK-TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKY 156 (389)
T ss_dssp HHHCCCCCTT-TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHH
T ss_pred HHhCCCCCCC-CeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHh
Confidence 9889876666 7 9999999999999999999999999999999999999999999999999998655788999999999
Q ss_pred hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 742 LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 742 l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
+++++ ++|++++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.+++... .+ +..+++. .+++
T Consensus 157 l~~~~-~~v~~~~~~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~--~~----~~~~~~~---~~~~ 225 (389)
T 1gd9_A 157 VTDKT-RALIINSPC-NPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARH--YS----IASLDGM---FERT 225 (389)
T ss_dssp CCTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCC--CC----GGGSTTC---GGGE
T ss_pred cCcCc-eEEEEECCC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCC--CC----HhhccCC---CCCE
Confidence 97655 588999997 999999999999999999999999999999999988876522 11 1222221 1479
Q ss_pred EEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 822 SLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 822 I~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
++++||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|+ ... ..++++++++.++++++
T Consensus 226 i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~~---~~~~~~~~~~~~~~~~~ 299 (389)
T 1gd9_A 226 ITVNGFSKTFAMTGWRLGFVAAPSW-IIERMVKFQMYNATCPVTFIQYAAAKALK--DER---SWKAVEEMRKEYDRRRK 299 (389)
T ss_dssp EEEEESTTTTTCGGGCCEEEECCHH-HHHHHHHHHTTTTCSCCHHHHHHHHHHHT--CHH---HHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhcCCcccceEEEEECHH-HHHHHHHHHhhhccCCCHHHHHHHHHHHh--CCC---cchHHHHHHHHHHHHHH
Confidence 9999999999999999999999976 9998876543 56788999999999994 221 12377888888888888
Q ss_pred HHh
Q 043334 900 RLK 902 (903)
Q Consensus 900 ~l~ 902 (903)
.+.
T Consensus 300 ~l~ 302 (389)
T 1gd9_A 300 LVW 302 (389)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 7
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-33 Score=323.76 Aligned_cols=290 Identities=11% Similarity=0.141 Sum_probs=240.3
Q ss_pred CCCCHHHHHHHHhhhh---ccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhc
Q 043334 594 FSRSAISVLNSAELSI---TETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNF 665 (903)
Q Consensus 594 l~~s~i~~l~~a~~a~---~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~ 665 (903)
++++.+..+.....+. .+..++++|+|+.|.|++++|+.+.+++.+++.. |....|.+++++++++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 112 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY 112 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTT
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 6677777777533110 0125678999999999999999999999888653 4556688999999999999988
Q ss_pred CCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCC----------CcccCH
Q 043334 666 GFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEV----------GFKMTE 735 (903)
Q Consensus 666 G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~----------~f~ld~ 735 (903)
|.+.+++ +|++|+|+++++..++.++++|||+|++++|+|..|...++..|++++.+|++.++ +|.+|+
T Consensus 113 g~~~~~~-~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~ 191 (447)
T 3b46_A 113 NTELKAE-NVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDF 191 (447)
T ss_dssp TSCCCGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECH
T ss_pred CCCCChh-hEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCH
Confidence 9887777 99999999999999999999999999999999999999999999999999986542 688999
Q ss_pred HHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhh-ccC
Q 043334 736 KTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL-YSS 814 (903)
Q Consensus 736 ~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l-~~~ 814 (903)
++|++.+++++ ++|++++|+ ||||.++|.+++++|+++|+++|++||+||+|.++.|++... ++ ..+ .+.
T Consensus 192 ~~l~~~l~~~~-~~v~l~~p~-nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~---~~----~~~~~~~ 262 (447)
T 3b46_A 192 EQFEKAITSKT-KAVIINTPH-NPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFT---RI----ATLSPEI 262 (447)
T ss_dssp HHHHTTCCTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC---CG----GGSCHHH
T ss_pred HHHHHhhccCC-eEEEEeCCC-CCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCc---CH----HHcCCCC
Confidence 99999987655 589999997 999999999999999999999999999999999999887332 11 112 111
Q ss_pred CCCCCceEEEccCchhcccccceeeEEEe-CcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHH
Q 043334 815 TNSSFNVSLLGGLSLKMLTGALKFGFLVL-NHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHI 891 (903)
Q Consensus 815 ~~~~~~vI~l~S~SK~~g~~GlRiG~lv~-~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r 891 (903)
.+++++++|+||.|+++|||+||+++ +++ +++.+..... ..+++++.|.++..+|+ .. ..++++++++
T Consensus 263 ---~~~~i~i~S~sK~~~~~G~riG~~~~~~~~-l~~~l~~~~~~~~~~~~~~~~~a~~~aL~--~~---~~~~~~~~~~ 333 (447)
T 3b46_A 263 ---GQLTLTVGSAGKSFAATGWRIGWVLSLNAE-LLSYAAKAHTRICFASPSPLQEACANSIN--DA---LKIGYFEKMR 333 (447)
T ss_dssp ---HTTEEEEEEHHHHTTCTTSCCEEEECSCHH-HHHHHHHHHHHHTSSCCHHHHHHHHHHHH--HH---HHHTHHHHHH
T ss_pred ---CCcEEEEecCchhcCCcchhhEEEEeCCHH-HHHHHHHHHhhccCCCChHHHHHHHHHHh--CC---cchHHHHHHH
Confidence 14899999999999999999999999 766 9998877543 66788999999999994 22 1246788899
Q ss_pred HHHHHHHHHHh
Q 043334 892 RNLESRSKRLK 902 (903)
Q Consensus 892 ~~y~~Rr~~l~ 902 (903)
+.|++|++.+.
T Consensus 334 ~~~~~~~~~l~ 344 (447)
T 3b46_A 334 QEYINKFKIFT 344 (447)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 8
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=3e-33 Score=317.98 Aligned_cols=297 Identities=13% Similarity=0.170 Sum_probs=243.6
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~ 662 (903)
|+++..++++.++.+... ..++++|+|+.|+|++++|+.+.+++.+.+.. |....|..++++++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~------~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~ 75 (410)
T 3e2y_A 2 AKRIEGLDSNVWVEFTKL------AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYG 75 (410)
T ss_dssp CGGGTTCCCCHHHHTTTT------TTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred chhhccCCccHHHHHHHH------hcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHH
Confidence 356677777877776532 24568999999999999999999999988753 5556678999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCC---------CCCccc
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTES---------EVGFKM 733 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~---------~~~f~l 733 (903)
+.+|.+.+++++|++|+|+++++..++.+++++||.|+++.|+|..+...++..|++++.++++. +++|.+
T Consensus 76 ~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~ 155 (410)
T 3e2y_A 76 KIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTF 155 (410)
T ss_dssp HHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEEC
T ss_pred HHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcC
Confidence 99998887733999999999999999999999999999999999999999999999999999863 246779
Q ss_pred CHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc
Q 043334 734 TEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS 813 (903)
Q Consensus 734 d~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~ 813 (903)
|++++++++++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..+..
T Consensus 156 d~~~l~~~~~~~~-~~v~~~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~--~~----~~~~~~ 227 (410)
T 3e2y_A 156 DPRELESKFSSKT-KAIILNTPH-NPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTH--VK----IATLPG 227 (410)
T ss_dssp CHHHHHTTCCTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC--CC----GGGSTT
T ss_pred CHHHHHhhcCCCc-eEEEEeCCC-CCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCC--CC----HHHcCC
Confidence 9999999987655 589999998 999999999999999999999999999999999999887543 12 222222
Q ss_pred CCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHH
Q 043334 814 STNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHI 891 (903)
Q Consensus 814 ~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r 891 (903)
. .+++++++||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|...........+++++++
T Consensus 228 ~---~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 303 (410)
T 3e2y_A 228 M---WERTITIGSAGKTFSVTGWKLGWSIGPAH-LIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLP 303 (410)
T ss_dssp C---GGGEEEEEEHHHHSSCGGGCCEEEECCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHH
T ss_pred c---cCeEEEEecchhhcCCCCceEEEEEECHH-HHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHH
Confidence 2 25899999999999999999999999987 8888876543 6778999999999999410000001135677888
Q ss_pred HHHHHHHHHHh
Q 043334 892 RNLESRSKRLK 902 (903)
Q Consensus 892 ~~y~~Rr~~l~ 902 (903)
+.++++++.+.
T Consensus 304 ~~~~~~~~~l~ 314 (410)
T 3e2y_A 304 KELEVKRDRMV 314 (410)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887764
No 9
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=2.9e-33 Score=321.11 Aligned_cols=293 Identities=15% Similarity=0.146 Sum_probs=233.4
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHH------------H---HHHHHHHHHccCCCCCch
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSL------------V---KAAIFESFARQNMSESEI 651 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~------------v---~~al~~al~~y~~~~G~~ 651 (903)
+|+++..++++.++.+..... ..++++|+|+.|.|+...++. + .+... ...+|....|++
T Consensus 7 ~s~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~ 81 (425)
T 2r2n_A 7 ITAASAARNPSPIRTMTDILS----RGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK-RALQYSPSAGIP 81 (425)
T ss_dssp SCHHHHTCCCCSGGGHHHHHH----HSCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHH-HHTSCCCTTCCH
T ss_pred HHHHHhcCCCchHHHHHHHhh----cCCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchh-hhcCCCCCCCCH
Confidence 677888888888887775432 124679999999998543321 0 11122 234688889999
Q ss_pred HHHHHHHHHHHhhcCCCCCC------CCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecC
Q 043334 652 DVTPSIQQYIKSNFGFPIDI------NAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPT 725 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~p------e~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~ 725 (903)
++|+++++++++.+|++.++ .++|++|+|+++++..++.++++|||+|++++|+|+.+...++..|++++.+|+
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 161 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVAS 161 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEECE
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeCc
Confidence 99999999999999987642 128999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcccCHHHHHHHhhc-----------CCCcEEEE-ECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCc
Q 043334 726 ESEVGFKMTEKTLVTILET-----------VKKPWVYI-SGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLE 793 (903)
Q Consensus 726 ~~~~~f~ld~~~L~~~l~~-----------~~~~~vil-~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~ 793 (903)
+. + .+|++.|++.++. ...++|++ ++|+ ||||.+++.+++++|+++|+++|++||+||+|+++.
T Consensus 162 ~~-~--~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~-NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~ 237 (425)
T 2r2n_A 162 DE-S--GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGN-NPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ 237 (425)
T ss_dssp ET-T--EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred CC-C--CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCc-CCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 64 2 3899999998872 12245544 4665 999999999999999999999999999999999998
Q ss_pred cCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHH
Q 043334 794 FNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKK 871 (903)
Q Consensus 794 f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~ 871 (903)
|++... .+ +..++. .+++|+++||||+++ +|+|+||++++++ +++.+..... ..+++.+.|.++..
T Consensus 238 ~~g~~~--~~----~~~~~~----~~~~i~~~s~SK~~~-~GlRiG~~~~~~~-l~~~l~~~~~~~~~~~~~~~q~a~~~ 305 (425)
T 2r2n_A 238 FNKFRV--PT----FLSMDV----DGRVIRADSFSKIIS-SGLRIGFLTGPKP-LIERVILHIQVSTLHPSTFNQLMISQ 305 (425)
T ss_dssp SSSSCC--CC----TGGGCT----TSCEEEEEESTTTTC-STTCCEEEEEEHH-HHHHHHHHHHTTTCSSCHHHHHHHHH
T ss_pred CCCCCC--CC----ccccCC----CCCEEEEccchhhcc-CccceEEEecCHH-HHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 976542 11 222332 258999999999998 9999999999987 9998887543 57889999999999
Q ss_pred HHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 872 LLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 872 ~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+|+. .+ .+.+.++++++++.|++|++.+.
T Consensus 306 ~l~~-~~-~~~~~~~~~~~~~~~~~~~~~l~ 334 (425)
T 2r2n_A 306 LLHE-WG-EEGFMAHVDRVIDFYSNQKDAIL 334 (425)
T ss_dssp HHHH-HH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHh-cc-cchHHHHHHHHHHHHHHHHHHHH
Confidence 9951 11 12456889999999999998875
No 10
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=1.2e-32 Score=311.63 Aligned_cols=283 Identities=16% Similarity=0.190 Sum_probs=235.9
Q ss_pred hhccCCCCHHHHHHHH-hhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhh
Q 043334 590 EMIGFSRSAISVLNSA-ELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSN 664 (903)
Q Consensus 590 ~~~~l~~s~i~~l~~a-~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~ 664 (903)
++.++.++.++.+... .. ....++++|+|+.|++++++++.+.+++.+.+.. |....|..++|+++++++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~--~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~ 84 (391)
T 3h14_A 7 SRSAVDPFIVMDVMEAARR--AEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEW 84 (391)
T ss_dssp STTCCCCCTTHHHHHHHHH--HHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHH
T ss_pred hHhhcCcchHHHHHHHHHH--HHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 5566666666666532 21 1246788999999999999999999999887653 455667899999999999999
Q ss_pred cCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc
Q 043334 665 FGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET 744 (903)
Q Consensus 665 ~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~ 744 (903)
+|++.+++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.++++.+++|.+|++++++.
T Consensus 85 ~g~~~~~~-~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~--- 160 (391)
T 3h14_A 85 YGVDLDPG-RVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL--- 160 (391)
T ss_dssp HCCCCCGG-GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---
T ss_pred hCCCCCHH-HEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---
Confidence 99887777 99999999999999999999999999999999999999999999999999998777789999999876
Q ss_pred CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEE
Q 043334 745 VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLL 824 (903)
Q Consensus 745 ~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l 824 (903)
++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... + ... + . ++++++
T Consensus 161 ~~-~~v~i~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~---~---~~~-~---~---~~~i~~ 225 (391)
T 3h14_A 161 DL-AGLMVASPA-NPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV---T---ALE-L---T---DECYVI 225 (391)
T ss_dssp CC-SEEEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC---C---GGG-T---C---SSSEEE
T ss_pred CC-eEEEECCCC-CCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc---C---hhh-c---C---CCEEEE
Confidence 44 589999998 999999999999999999999999999999999998887642 1 111 1 1 479999
Q ss_pred ccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 825 GGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 825 ~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++.++|. . .+++++.++.++++++.+.
T Consensus 226 ~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~-----~~~~~~~~~~~~~~~~~l~ 296 (391)
T 3h14_A 226 NSFSKYFSMTGWRVGWMVVPED-QVRVVERIAQNMFICAPHASQVAALAALD---C-----DAELQANLDVYKANRKLML 296 (391)
T ss_dssp EESSSTTCCTTSCCEEEECCGG-GHHHHHHHHHHTTCCCCHHHHHHHHHHTT---C-----HHHHHHHHHHHHHHHHHHH
T ss_pred EechhccCCccceeEEEEeCHH-HHHHHHHHHhhhccCCCHHHHHHHHHHhC---C-----hHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 8888876653 66788999999988884 2 2667778888888887764
No 11
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.1e-32 Score=319.13 Aligned_cols=287 Identities=14% Similarity=0.177 Sum_probs=236.8
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCC--CcHHHHHHHHHHHH-------ccCCCCCchHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLP--IPSLVKAAIFESFA-------RQNMSESEIDVTPSI 657 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~--~p~~v~~al~~al~-------~y~~~~G~~~lr~al 657 (903)
+|+++.++.++.++.+..... ++++|+|+.|.|+.. +++.+.+++.+.+. .|....|.+++++++
T Consensus 54 ~s~~~~~~~~s~~~~~~~~~~------~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~i 127 (448)
T 3aow_A 54 FSKKALEMRASEVRELLKLVE------TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETL 127 (448)
T ss_dssp CCHHHHHCCCCHHHHHHHHHH------TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHH
T ss_pred hhHHHhcCCCcHHHHHHHhcc------CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHH
Confidence 566777788888887765322 357999999998754 67778888777654 366667899999999
Q ss_pred HHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHH
Q 043334 658 QQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKT 737 (903)
Q Consensus 658 a~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~ 737 (903)
++++++.+|++ +++ +|++|+|+++++..++.+++++||.|+++.|+|..+...++..|++++.+|+++ ++ +|+++
T Consensus 128 a~~~~~~~g~~-~~~-~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~g--~d~~~ 202 (448)
T 3aow_A 128 MKWLGKRYGIS-QDN-DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDD-EG--MKVEI 202 (448)
T ss_dssp HHHHHHHHCCC-TTS-EEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET-TE--ECHHH
T ss_pred HHHHHHhcCcC-Chh-hEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCC-CC--CCHHH
Confidence 99998888986 655 999999999999999999999999999999999999999999999999999975 33 89999
Q ss_pred HHHHhh----c-CCCcEE-EEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhh
Q 043334 738 LVTILE----T-VKKPWV-YISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL 811 (903)
Q Consensus 738 L~~~l~----~-~~~~~v-il~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l 811 (903)
|++.++ + ...++| ++++|+ ||||.+++.+++++|+++|+++|++||+||+|..+.|++... .+ +..+
T Consensus 203 L~~~l~~~~~~~~~~k~v~~~~~~~-NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~--~~----~~~~ 275 (448)
T 3aow_A 203 LEEKLKELKSQGKKVKVVYTVPTFQ-NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPE--KK----IKAL 275 (448)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCC--CC----TGGG
T ss_pred HHHHHhhhhccCCCCeEEEECCCCC-CCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCC--cC----HHhc
Confidence 999987 4 122455 356776 999999999999999999999999999999999999977542 11 2223
Q ss_pred ccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHH
Q 043334 812 YSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAE 889 (903)
Q Consensus 812 ~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~ 889 (903)
+. .+++++++||||.++ +|+|+||++++++ +++.+..... ..+++.+.|.++..+|+ .+ .+++++++
T Consensus 276 ~~----~~~vi~~~S~SK~~~-~GlriG~v~~~~~-l~~~l~~~~~~~~~~~~~~~q~a~~~~L~--~~---~~~~~~~~ 344 (448)
T 3aow_A 276 DN----EGRVIYLGTFSKILA-PGFRIGWMVGDPG-IIRKMEIAKQSTDLCTNVFGQVVAWRYVD--GG---YLEKHIPE 344 (448)
T ss_dssp CT----TSCEEEEEESTTTTC-GGGCCEEEEECHH-HHHHHHHHHHHHHSSCCHHHHHHHHHHHH--TT---HHHHHHHH
T ss_pred CC----CCCEEEEccchhhcc-ccccEEEEEeCHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHH--hC---CHHHHHHH
Confidence 22 258999999999999 9999999999977 9998887653 56779999999999994 22 35688999
Q ss_pred HHHHHHHHHHHHh
Q 043334 890 HIRNLESRSKRLK 902 (903)
Q Consensus 890 ~r~~y~~Rr~~l~ 902 (903)
+++.|++|++.+.
T Consensus 345 ~~~~~~~~~~~l~ 357 (448)
T 3aow_A 345 IRKFYKPRRDAML 357 (448)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 12
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=9.5e-33 Score=311.79 Aligned_cols=294 Identities=16% Similarity=0.261 Sum_probs=238.7
Q ss_pred hhhhccCCCCHHHHHHH-HhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 588 STEMIGFSRSAISVLNS-AELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~-a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
++++..++.+.+..+.. +.. ....+++.|+|+.|++++++++.+.+++.+.+.. |....|..++++++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~ 81 (388)
T 1j32_A 4 AARVESVSPSMTLIIDAKAKA--MKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQ 81 (388)
T ss_dssp CHHHHTSCCCSSTTTHHHHHH--HHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHH
T ss_pred hhHhHhCCccHHHHHHHHHHH--HHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 44555566655544443 111 1235778999999999988899999998888753 4445678999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|.+.+++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++.+++|.+|++++++.+
T Consensus 82 ~~~g~~~~~~-~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 160 (388)
T 1j32_A 82 RDNGLCYGAD-NILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI 160 (388)
T ss_dssp HHHCCCCCGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHC
T ss_pred HhcCCCCChh-hEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhc
Confidence 9899877766 999999999999999999999999999999999999999999999999999986557889999999999
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|+++.|++... .+ +..+.... .++++
T Consensus 161 ~~~~-~~v~~~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~----~~~~~~~~--~~~~~ 230 (388)
T 1j32_A 161 TPKT-KLLVFNTPS-NPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQH--LS----IGAASPEA--YERSV 230 (388)
T ss_dssp CTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC--CC----GGGSCHHH--HHTEE
T ss_pred CcCc-eEEEEeCCC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC--CC----HHHccccc--cCCEE
Confidence 8655 589999997 999999999999999999999999999999999988876542 11 11111100 13799
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++|+||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|. .. .++++++++.++++++.
T Consensus 231 ~~~s~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~ 302 (388)
T 1j32_A 231 VCSGFAKTYAMTGWRVGFLAGPVP-LVKAATKIQGHSTSNVCTFAQYGAIAAYE--NS-----QDCVQEMLAAFAERRRY 302 (388)
T ss_dssp EEEESTTTTTCTTTCCEEEECCHH-HHHHHHHHHHTTTCSCCHHHHHHHHHHHH--SC-----SHHHHHHHHHHHHHHHH
T ss_pred EEeechhccCCcccceEEEEeCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHh--CC-----cHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887 8888876543 57788999999999994 22 25677777788887777
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 303 l~ 304 (388)
T 1j32_A 303 ML 304 (388)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 13
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-32 Score=314.61 Aligned_cols=296 Identities=15% Similarity=0.168 Sum_probs=232.0
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYI 661 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l 661 (903)
+++++..++.+.+..+...... ....+.++|||+.|.+++++++.+.+++.+.+. .|....|..++++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~ 88 (412)
T 2x5d_A 10 RFARIDRLPPYVFNITAELKMA-ARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWY 88 (412)
T ss_dssp -----------CHHHHHHHHHH-HHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHH
T ss_pred hhHHHhhcCchHHHHHHHHHHH-HhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHH
Confidence 4566667777767665532110 123577899999999998888999998887654 2445678899999999999
Q ss_pred HhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHH
Q 043334 662 KSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTI 741 (903)
Q Consensus 662 ~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~ 741 (903)
.+.+|.+.+++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+|++.+++|.+|++.+++.
T Consensus 89 ~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 168 (412)
T 2x5d_A 89 RDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRE 168 (412)
T ss_dssp HHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHT
T ss_pred HHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHh
Confidence 99889876662289999999999999999999999999999999999999999999999999998655788899999999
Q ss_pred hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 742 LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 742 l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
+++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|..+.|++... .+ +..++.. .+++
T Consensus 169 i~~~~-~~v~l~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~~~~---~~~~ 237 (412)
T 2x5d_A 169 SIPKP-RMMILGFPS-NPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKA--PS----IMQVPGA---KDIA 237 (412)
T ss_dssp EESCC-SEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC--CC----GGGSTTG---GGTE
T ss_pred cccCc-eEEEECCCC-CCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC--CC----hhhccCc---cCcE
Confidence 98666 589999997 999999999999999999999999999999999988866432 11 1122221 1479
Q ss_pred EEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 822 SLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 822 I~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
++++||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|+ .. +++++++++.++++++
T Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~ 309 (412)
T 2x5d_A 238 VEFFTLSKSYNMAGWRIGFMVGNPE-LVSALARIKSYHDYGTFTPLQVAAIAALE--GD-----QQCVRDIARQYQQRRD 309 (412)
T ss_dssp EEEEECC-CCSCTTSCCEEEEECHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHHH--SC-----SHHHHHHHHHHHHHHH
T ss_pred EEEecCccccCCcccceEEEEcCHH-HHHHHHHHHhhhccCCCHHHHHHHHHHHh--CC-----HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876 8888877543 57789999999999994 22 2567778888888887
Q ss_pred HHh
Q 043334 900 RLK 902 (903)
Q Consensus 900 ~l~ 902 (903)
.+.
T Consensus 310 ~l~ 312 (412)
T 2x5d_A 310 VLV 312 (412)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 14
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=2.5e-32 Score=311.38 Aligned_cols=302 Identities=13% Similarity=0.102 Sum_probs=234.9
Q ss_pred hhhhccCCCCHHHHHHH-HhhhhccCCCCCeEEccCCCC-----CCCCcHHHHHHHHHH----HHccCCCCCchHHHHHH
Q 043334 588 STEMIGFSRSAISVLNS-AELSITETPNSGLIHMDVDQS-----FLPIPSLVKAAIFES----FARQNMSESEIDVTPSI 657 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~-a~~a~~~~~~~~~IdLs~g~p-----~~~~p~~v~~al~~a----l~~y~~~~G~~~lr~al 657 (903)
+.+.....++.+..+.. +.....+..+.++|+|+.|++ ++++++.+.+++.+. ...|.+..|.+++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~l 88 (413)
T 3t18_A 9 KRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIV 88 (413)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHH
T ss_pred hhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHH
Confidence 44555555566655553 222111224668999999997 778888888887663 23477778999999999
Q ss_pred HHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHH
Q 043334 658 QQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKT 737 (903)
Q Consensus 658 a~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~ 737 (903)
++++.+.++.. .++ +|++|+|+++++..++.++++|||+|+++.|+|+.|...++..|++++.+|+.+++ |.+|+++
T Consensus 89 a~~~~~~~~~~-~~~-~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~ 165 (413)
T 3t18_A 89 IDTLFGPYKPE-GYI-SAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNIDV 165 (413)
T ss_dssp HHHHHGGGCCS-SEE-EEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCHHH
T ss_pred HHHHhcccCcc-ccC-cEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCHHH
Confidence 99998876644 334 89999999999999999999999999999999999999999999999999985433 7899999
Q ss_pred HHHHhhc----CCCcEEEEECC-CCCCcccCCCHHHHHHHHHHHH------hCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 738 LVTILET----VKKPWVYISGP-TINPTGLLYSNKEIENILTVCA------KYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 738 L~~~l~~----~~~~~vil~~P-~~NPTG~v~s~eel~eI~~ia~------k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
+++.+++ +++.++++++| + ||||.+++.+++++|+++|+ ++|++||+||+|.++.+++... . +
T Consensus 166 l~~~l~~~~~~~~~~~vi~~~p~~-NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~--~---~ 239 (413)
T 3t18_A 166 YKEAIDEGIRDSDRIASLINSPGN-NPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQ--R---K 239 (413)
T ss_dssp HHHHHHHHHHHCSEEEEEEECSSC-TTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTT--T---G
T ss_pred HHHHHHHHhhcCCCEEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhH--H---H
Confidence 9999875 55447889999 7 99999999999999999999 8999999999999888877542 1 2
Q ss_pred hhhhhccCCCCCCceEEEccCchhcccccceeeEEEe---CcHHHHHHHHhCCC------CCCCcHHHHHHHHHHHhccc
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL---NHPQLVDAFSSFPG------LSKPHSTVRYAIKKLLGLRE 877 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~---~~~~li~~l~~~~~------~~~~s~~~Q~aa~~~L~~~~ 877 (903)
+....+..++ +..+|+++||||+||++|+|+||+++ +++ +++.+.+... ..+++.+.|.++..+|. +
T Consensus 240 ~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~ 315 (413)
T 3t18_A 240 FFEKFSNLPR-NLFVVVAFSMSKSHTAYGLRSGAAVGISSSKE-IIEEFEASLAHSARCNWSNGTHAAQNILIELER--A 315 (413)
T ss_dssp GGGGGTTCCT-TEEEEEEEEHHHHTTCGGGCCEEEEEEESCHH-HHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTS--H
T ss_pred HHHHHhhcCC-CeeEEEEEecCccCCCcCcCcEEEEEecCCHH-HHHHHHHHHHHhhhccccCCChHHHHHHHHHhc--C
Confidence 2222222221 11258999999999999999999999 665 8888887542 35688999999998883 2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 878 RKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 878 ~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+....+.++++++++.|++|++.+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~l~ 340 (413)
T 3t18_A 316 ENKKIYEQELVDLRNMLKSRADVFV 340 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2100145667788889999988764
No 15
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=2.7e-32 Score=306.53 Aligned_cols=284 Identities=17% Similarity=0.188 Sum_probs=233.9
Q ss_pred cCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH---ccCCCCCchHHHHHHHHHHHhhcCCCC
Q 043334 593 GFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA---RQNMSESEIDVTPSIQQYIKSNFGFPI 669 (903)
Q Consensus 593 ~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~---~y~~~~G~~~lr~ala~~l~~~~G~~~ 669 (903)
+++++.+..+...... ....+ ++|||+.|++++++|+.+.+++.+.+. .|....|..++++++++++++.+|++.
T Consensus 3 ~~~~~~~~~~~~~~~~-~~~~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~ 80 (376)
T 3ezs_A 3 TFEPYPFERLRALLKE-ITPKK-RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIEL 80 (376)
T ss_dssp CCCCCHHHHHHHHHTT-CCCSS-CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCcchHHHHHHHHHh-hhccC-CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3556677777653221 12345 899999999999999999999887653 356667889999999999999999876
Q ss_pred CCCCcEEecCchHHHHHHHHHHhccC--CCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCC
Q 043334 670 DINAEFIYADCSQSLFNKLVLCCILE--GGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKK 747 (903)
Q Consensus 670 ~pe~~I~vt~Gs~~al~~ll~~l~~p--GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~ 747 (903)
+++ +|++|+|+++++..++.+++++ ||+|+++.|+|..+...++..|++++.+|++.++++.+ ++++.+.+++
T Consensus 81 ~~~-~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~l~~~~~~~~- 155 (376)
T 3ezs_A 81 KEN-ELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP---SLNEKELQEV- 155 (376)
T ss_dssp CGG-GEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC---CCCHHHHHHC-
T ss_pred CHH-HEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch---hHHhhhccCC-
Confidence 666 9999999999999999999999 99999999999999999999999999999987656554 5556666555
Q ss_pred cEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc----CCCCCCceEE
Q 043334 748 PWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS----STNSSFNVSL 823 (903)
Q Consensus 748 ~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~----~~~~~~~vI~ 823 (903)
+++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.+++... + .....+. . .+++++
T Consensus 156 ~~v~~~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~---~---~~~~~~~~~~~~---~~~~i~ 225 (376)
T 3ezs_A 156 DLVILNSPN-NPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPP---S---LLEACMLAGNEA---FKNVLV 225 (376)
T ss_dssp SEEEECSSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCC---C---HHHHHHHTTCTT---CTTEEE
T ss_pred CEEEEcCCC-CCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCC---C---HHHccccccccc---cCcEEE
Confidence 589999997 999999999999999999999999999999999988877442 2 2221110 1 158999
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|. .. +++++.++.++++++.+
T Consensus 226 ~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~------~~~~~~~~~~~~~~~~l 296 (376)
T 3ezs_A 226 IHSLSKRSSAPGLRSGFIAGDSR-LLEKYKAFRAYLGYTSANAIQKASEAAWL--DD------RHAEFFRNIYANNLKLA 296 (376)
T ss_dssp EEESTTTTTCGGGCCEEEEECHH-HHHHHHHHHTTTCCCCCHHHHHHHHHHHH--CS------HHHHHHHHHHHHHHHHH
T ss_pred EecchhccCCccceeEEEeeCHH-HHHHHHHHHhhhcCCCChHHHHHHHHHHh--Cc------HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877 9998887654 67789999999999995 22 45788888888888877
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 297 ~ 297 (376)
T 3ezs_A 297 R 297 (376)
T ss_dssp H
T ss_pred H
Confidence 5
No 16
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-32 Score=309.20 Aligned_cols=283 Identities=18% Similarity=0.160 Sum_probs=231.4
Q ss_pred CHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCC
Q 043334 597 SAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDI 671 (903)
Q Consensus 597 s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~p 671 (903)
+.+..+...... ....+.+.|||+.|++++++++.+.+++.+.+.+ |....|..++++++++++++.+|++.++
T Consensus 8 ~~~~~~~~~~~~-~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~ 86 (376)
T 2dou_A 8 SVFLVVDEAKRK-ARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP 86 (376)
T ss_dssp HHHHHHHHHHHH-HHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT
T ss_pred chHHHHHHHHHH-hhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 455555532211 1145778999999999988899999999888743 2222367889999999999988988665
Q ss_pred CCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEE
Q 043334 672 NAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVY 751 (903)
Q Consensus 672 e~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vi 751 (903)
+++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+|+ +++|.+|++++++.+++++ ++|+
T Consensus 87 ~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~-~~v~ 163 (376)
T 2dou_A 87 RREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREA-KVLL 163 (376)
T ss_dssp TTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHE-EEEE
T ss_pred CccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCc-eEEE
Confidence 448999999999999999999999999999999999999999999999999998 4678899999998887655 5899
Q ss_pred EECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 752 ISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 752 l~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
+++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.+++... + .+...+. .+++++++||||.+
T Consensus 164 l~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~---~---~~~~~~~----~~~~i~~~s~sK~~ 232 (376)
T 2dou_A 164 LNYPN-NPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAP---S---PLALPGA----KERVVELFSLSKSY 232 (376)
T ss_dssp ECSSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCC---C---GGGSTTG----GGTEEEEEEHHHHH
T ss_pred ECCCC-CCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC---C---hhhcCCC----CCcEEEEecchhhc
Confidence 99997 999999999999999999999999999999999888876432 1 1221111 14799999999999
Q ss_pred ccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 832 LTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 832 g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|+ +. ++++++.++.++++++.+.
T Consensus 233 ~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l~ 297 (376)
T 2dou_A 233 NLAGFRLGFALGSEE-ALARLERVKGVIDFNQYAGVLRMGVEALK--TP-----KEVVRGYARVYRERALGMA 297 (376)
T ss_dssp TCGGGCCEEEEECHH-HHHHHHHHHHHHCCCSCHHHHHHHHHHHT--SC-----HHHHHHHHHHHHHHHHHHH
T ss_pred CChhheeEEEecCHH-HHHHHHHHHHhcccCCCHHHHHHHHHHHh--Cc-----HHHHHHHHHHHHHHHHHHH
Confidence 999999999999877 9888877543 56778999999999994 32 3678888888888888764
No 17
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=4e-32 Score=306.72 Aligned_cols=289 Identities=10% Similarity=0.150 Sum_probs=239.4
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHh
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKS 663 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~ 663 (903)
++++..+..+.+..+..... .++.|+|+.|.+++++++.+.+++.+.+.. |....|..++++++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~ 82 (386)
T 1u08_A 9 QSKLPQLGTTIFTQMSALAQ------QHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTER 82 (386)
T ss_dssp CCSCCCCCCCHHHHHHHHHH------HTTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred chhhhcCCccHHHHHHHHHh------cCCeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHH
Confidence 45667777777777665332 246899999999988899999999988754 44456789999999999999
Q ss_pred hcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh
Q 043334 664 NFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 664 ~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
.+|.+.+++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+|++.+ +|.+|++++++.++
T Consensus 83 ~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~ 161 (386)
T 1u08_A 83 LYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLS 161 (386)
T ss_dssp HHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCC
T ss_pred HhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhc
Confidence 88987665447999999999999999999999999999999999999999999999999999753 57899999999997
Q ss_pred cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 744 TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
+++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|..+.|++... .++ ..++.. .+++++
T Consensus 162 ~~~-~~v~l~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~--~~~----~~~~~~---~~~~i~ 230 (386)
T 1u08_A 162 ERT-RLVILNTPH-NPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGH--ASV----LAHPQL---RERAVA 230 (386)
T ss_dssp TTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCC--CCG----GGSHHH---HTTEEE
T ss_pred ccC-EEEEEeCCC-CCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCC--cCh----hcccCc---cCcEEE
Confidence 655 589999997 999999999999999999999999999999999998876542 111 111111 147999
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|+ .. +++++++++.++++++.+
T Consensus 231 ~~s~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l 302 (386)
T 1u08_A 231 VSSFGKTYHMTGWKVGYCVAPAP-ISAEIRKVHQYLTFSVNTPAQLALADMLR--AE-----PEHYLALPDFYRQKRDIL 302 (386)
T ss_dssp EEEHHHHTTCGGGCCEEEECCHH-HHHHHHHHHHHHTSSCCHHHHHHHHHHHH--HC-----THHHHTHHHHHHHHHHHH
T ss_pred EecchhhcCCcccceEEEEcCHH-HHHHHHHHHHhhccCCChHHHHHHHHHHh--CC-----cHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877 8888876553 56778899999999994 22 257778888888888876
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 303 ~ 303 (386)
T 1u08_A 303 V 303 (386)
T ss_dssp H
T ss_pred H
Confidence 4
No 18
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4.5e-32 Score=307.22 Aligned_cols=273 Identities=14% Similarity=0.197 Sum_probs=227.7
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
.+.++..++.+.++.+...... ....+++.|+|+.|++++++++.+.+++.+.+.. |....|..++++++++++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~ 92 (389)
T 1o4s_A 14 VSRRISEIPISKTMELDAKAKA-LIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIG 92 (389)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHH-HHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHhhcCccHHHHHHHHHHH-HHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4556667777777666542111 1125778999999999988889999999888754 3344578999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|++.+++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+|++++++|.+|++++++.+
T Consensus 93 ~~~g~~~~~~-~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 171 (389)
T 1o4s_A 93 ERYKKDISPD-QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLL 171 (389)
T ss_dssp HHHTCCCCGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTC
T ss_pred HHhCCCCCHH-HEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhc
Confidence 9889876666 999999999999999999999999999999999999999999999999999976557889999999999
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|+.+.+++... + +..++... ++++
T Consensus 172 ~~~~-~~v~~~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~---~----~~~~~~~~---~~~i 239 (389)
T 1o4s_A 172 VGKT-KAVLINSPN-NPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFT---S----ILDVSEGF---DRIV 239 (389)
T ss_dssp CTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCC---C----HHHHCSSS---TTEE
T ss_pred ccCc-eEEEEcCCC-CCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC---C----HhhcCCCC---CcEE
Confidence 7755 589999998 999999999999999999999999999999999888876321 2 22232211 4799
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
+++||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|.
T Consensus 240 ~~~s~sK~~~~~G~r~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 292 (389)
T 1o4s_A 240 YINGFSKSHSMTGWRVGYLISSEK-VATAVSKIQSHTTSCINTVAQYAALKALE 292 (389)
T ss_dssp EEEESTTTTTCGGGCCEEEECCHH-HHHHHHHHHHHHTCSCCHHHHHHHHHHTT
T ss_pred EEeechhhcCCcccceEEEEeCHH-HHHHHHHHhhhcccCCCHHHHHHHHHHHh
Confidence 999999999999999999999887 8888877653 56788999999999884
No 19
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=3.1e-32 Score=310.43 Aligned_cols=291 Identities=14% Similarity=0.191 Sum_probs=238.3
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~l~ 662 (903)
++++.+++++.+..+..... ...+.++|+|+.|.+++++++.+.+++.+.+. .|....|..+++++++++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~---~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~ 99 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKI---EHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQ 99 (404)
T ss_dssp CHHHHTSCCCTTC----------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHH---hcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 67778888887776654322 13456799999999998888999999888753 35555689999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|.+.+|+++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.++++. ++|.+|+++|++.+
T Consensus 100 ~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l 178 (404)
T 2o1b_A 100 RQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQI 178 (404)
T ss_dssp HHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHH
T ss_pred HHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhh
Confidence 98898866523899999999999999999999999999999999999999999999999999976 57889999999888
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|..+.|++... + ... +.+. .++++
T Consensus 179 ~~~~-~~v~l~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~---~---~~~-~~~~---~~~~i 246 (404)
T 2o1b_A 179 IDKT-KLIYLTYPN-NPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNP---S---ILA-SENG---KDVAI 246 (404)
T ss_dssp HHHE-EEEEECSSC-TTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCC---C---GGG-STTH---HHHEE
T ss_pred ccCc-eEEEEcCCC-CCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC---C---hhh-cCCC---CCCEE
Confidence 7655 588899997 999999999999999999999999999999999988876432 1 111 1111 14799
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+++||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|+ .+ +++++++++.++++++.
T Consensus 247 ~~~s~sK~~g~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~ 318 (404)
T 2o1b_A 247 EIYSLSKGYNMSGFRVGFAVGNKD-MIQALKKYQTHTNAGMFGALQDAAIYALN--HY-----DDFLEEQSNVFKTRRDR 318 (404)
T ss_dssp EEEESTTTTTCGGGCCEEEEECHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHHH--HC-----HHHHHHHHHHHHHHHHH
T ss_pred EEEecchhccCchhheEeEecCHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHh--cC-----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999877 8888877554 56789999999999994 22 36788888888888887
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 319 l~ 320 (404)
T 2o1b_A 319 FE 320 (404)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 20
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5e-32 Score=308.96 Aligned_cols=291 Identities=15% Similarity=0.174 Sum_probs=240.3
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
+|+++..++++.+..+..... .++.|+|+.|.+++++++.+.+++.+.+.. |....|..++++++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~ 76 (411)
T 2o0r_A 3 TVSRLRPYATTVFAEMSALAT------RIGAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRR 76 (411)
T ss_dssp CCGGGGGGSSCHHHHHHHHHH------TTTCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhHhHhcCccHHHHHHHHhh------cCCeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 456677778888877765432 346899999999988899999999988764 4445678999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCC-CCcccCHHHHHHH
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESE-VGFKMTEKTLVTI 741 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~-~~f~ld~~~L~~~ 741 (903)
+.+|.+.+++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+|++.+ ++|.+|++.+++.
T Consensus 77 ~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 156 (411)
T 2o0r_A 77 RHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRA 156 (411)
T ss_dssp HHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHH
T ss_pred HHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHh
Confidence 988987665447999999999999999999999999999999999999999999999999998753 3578999999999
Q ss_pred hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 742 LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 742 l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
+++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..++.. .+++
T Consensus 157 l~~~~-~~v~l~~~~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~~~~---~~~~ 225 (411)
T 2o0r_A 157 VTPRT-RALIINSPH-NPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARH--LP----LAGFDGM---AERT 225 (411)
T ss_dssp CCTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCC--CC----GGGSTTT---GGGE
T ss_pred hccCc-eEEEEeCCC-CCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--cC----hhhccCC---CCCE
Confidence 97655 589999997 999999999999999999999999999999999988876532 11 1222221 1479
Q ss_pred EEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 822 SLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 822 I~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
++++||||.+|++|+|+||++++++ +++.+..... ..+.+.+.|.++..+|+ .. +++++++++.++++++
T Consensus 226 i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~ 297 (411)
T 2o0r_A 226 ITISSAAKMFNCTGWKIGWACGPAE-LIAGVRAAKQYLSYVGGAPFQPAVALALD--TE-----DAWVAALRNSLRARRD 297 (411)
T ss_dssp EEEEEHHHHTTCTTTCEEEEECCHH-HHHHHHHHHHHHTSCCCTTHHHHHHHHHH--HC-----HHHHHHHHHHHHHHHH
T ss_pred EEEeechhhcCCccceEEEEeeCHH-HHHHHHHHHhhccCCCChHHHHHHHHHHh--CC-----hHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876 8888876543 55667788999998884 22 3677788888888887
Q ss_pred HHh
Q 043334 900 RLK 902 (903)
Q Consensus 900 ~l~ 902 (903)
.+.
T Consensus 298 ~l~ 300 (411)
T 2o0r_A 298 RLA 300 (411)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 21
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=7.5e-32 Score=307.95 Aligned_cols=275 Identities=13% Similarity=0.076 Sum_probs=222.4
Q ss_pred CCCCeEEccCCCC-----CCCCcHHHHHHHHHHH----HccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 613 PNSGLIHMDVDQS-----FLPIPSLVKAAIFESF----ARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 613 ~~~~~IdLs~g~p-----~~~~p~~v~~al~~al----~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
.+.++|+|++|+| ++++++.+.+++.+.. ..|.+..|.+++|+++++++.+.++.+. ++ +|++|+|+++
T Consensus 36 g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~-~~-~i~~t~g~~~ 113 (418)
T 3rq1_A 36 GRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEG-HI-RSIATAGGTG 113 (418)
T ss_dssp CGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSS-EE-EEEEESHHHH
T ss_pred cCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccc-cc-cEEECCchHH
Confidence 4668999999986 7788888888876532 3477778999999999999988776542 23 8999999999
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc----CCCcEEEEECC-CCC
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET----VKKPWVYISGP-TIN 758 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~----~~~~~vil~~P-~~N 758 (903)
++..++.++++|||+|++++|+|+.|...++..|++++.+|+++++ |.+|++.+++.+++ +++.++++++| + |
T Consensus 114 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~-N 191 (418)
T 3rq1_A 114 GIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFNHEAFQNRVNELAAKQTNVVVIFNTPGN-N 191 (418)
T ss_dssp HHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSC-T
T ss_pred HHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcCHHHHHHHHHHhhccCCCEEEEEeCCCC-C
Confidence 9999999999999999999999999999999999999999996543 78999999999875 55448899999 7 9
Q ss_pred CcccCCCHHHHHHHHHHHH------hCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc--eEEEccCchh
Q 043334 759 PTGLLYSNKEIENILTVCA------KYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN--VSLLGGLSLK 830 (903)
Q Consensus 759 PTG~v~s~eel~eI~~ia~------k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~--vI~l~S~SK~ 830 (903)
|||.+++.+++++|+++|+ ++|++||+||+|.++.+++... .++....++.+ ++ +|+++||||+
T Consensus 192 PtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~-----~~~~~~~~~~~---~~~~~i~~~S~sK~ 263 (418)
T 3rq1_A 192 PTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEV-----RAFFNKFSHLP---KEILTCVCYSLSKG 263 (418)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHH-----HGGGGGGTTCC---TTEEEEEEEESTTT
T ss_pred CCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHH-----HHHHHHHHhcC---CCceEEEEEeCCCC
Confidence 9999999999999999999 8999999999998877665321 11222222222 23 6899999999
Q ss_pred cccccceeeEEEe---CcHHHHHHHHhCCC------CCCCcHHHHHHHHHHHhcccc-cchhHHHHHHHHHHHHHHHHHH
Q 043334 831 MLTGALKFGFLVL---NHPQLVDAFSSFPG------LSKPHSTVRYAIKKLLGLRER-KARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 831 ~g~~GlRiG~lv~---~~~~li~~l~~~~~------~~~~s~~~Q~aa~~~L~~~~~-~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
||++|+|+||+++ +++ +++.+.+... ..+++.+.|.++..+|. +. ..+.+.+++.++++.|++|++.
T Consensus 264 ~~~~G~r~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (418)
T 3rq1_A 264 FTMYGQRVGAMIGISDDEE-IADEFFEVNKSTSRATWSNICRPAMRTMANIVA--DPAKFKEYEAERNCYYQLIRDRADI 340 (418)
T ss_dssp TTCCSSCCEEEEEEESSHH-HHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcCCcceEEEEEeCCHH-HHHHHHHHHHHHHhhccCCCchHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 665 8888877542 35688999999999994 22 0122445666788889998887
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 341 l~ 342 (418)
T 3rq1_A 341 FK 342 (418)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 22
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=6.6e-32 Score=305.93 Aligned_cols=272 Identities=15% Similarity=0.213 Sum_probs=220.9
Q ss_pred HhhhhccC--CCCHHHHHHHH-hhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc--------cCCCCCchHHHH
Q 043334 587 KSTEMIGF--SRSAISVLNSA-ELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR--------QNMSESEIDVTP 655 (903)
Q Consensus 587 ~s~~~~~l--~~s~i~~l~~a-~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~--------y~~~~G~~~lr~ 655 (903)
+++++.++ ..+.++.+... ........++++|||+.|.|++++++.+.+++.+.+.+ |.+..|..++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~ 83 (398)
T 3ele_A 4 VNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRA 83 (398)
T ss_dssp SCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHH
T ss_pred hhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHH
Confidence 34555555 45566655432 11001124568999999999998999999998887643 556678899999
Q ss_pred HHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCC-CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccC
Q 043334 656 SIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEG-GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMT 734 (903)
Q Consensus 656 ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pG-D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld 734 (903)
++++++++.+|.+.+++ +|++|+|+++++..++.+++++| |+|+++.|+|..+...++..|++++.+|+++ ++|.+|
T Consensus 84 ~la~~l~~~~g~~~~~~-~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d 161 (398)
T 3ele_A 84 AIAEFLNNTHGTHFNAD-NLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHFQID 161 (398)
T ss_dssp HHHHHHHHHHCCCCCGG-GEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTSSCC
T ss_pred HHHHHHHHHhCCCCChH-HEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCCcCC
Confidence 99999999999887777 99999999999999999999999 9999999999999999999999999999975 478899
Q ss_pred HHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHh------CCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 735 EKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAK------YGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 735 ~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k------~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
++++++++++++ +++++++|+ ||||.+++.+++++|+++|++ +|++||+||+|+++.|++...+ ..
T Consensus 162 ~~~l~~~l~~~~-~~v~~~~p~-nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~------~~ 233 (398)
T 3ele_A 162 FDALEERINAHT-RGVIINSPN-NPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVP------FV 233 (398)
T ss_dssp HHHHHHTCCTTE-EEEEECSSC-TTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCC------CG
T ss_pred HHHHHHHhCcCC-CEEEEcCCC-CCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcC------Ch
Confidence 999999998765 589999997 999999999999999999999 9999999999999988775421 11
Q ss_pred hhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH-----HHHHHHHhC---CCCCCCcHHHHHHHHHHHh
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP-----QLVDAFSSF---PGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~-----~li~~l~~~---~~~~~~s~~~Q~aa~~~L~ 874 (903)
.. .. +++++++||||.+|++|+|+||++++++ .+.+.+... ....+++.+.|.++..++.
T Consensus 234 ~~--~~----~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 301 (398)
T 3ele_A 234 TK--YY----DNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQG 301 (398)
T ss_dssp GG--TC----SSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTT
T ss_pred Hh--hc----CCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhc
Confidence 11 11 4799999999999999999999999876 133343322 2356778899999888884
No 23
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=5.8e-32 Score=306.97 Aligned_cols=296 Identities=13% Similarity=0.036 Sum_probs=224.4
Q ss_pred cCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC-CCCC----cHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHH
Q 043334 593 GFSRSAISVLNSAELSITETPNSGLIHMDVDQS-FLPI----PSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 593 ~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p-~~~~----p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~ 662 (903)
..+++.+..+..... ....+++|+|++|.+ +... .+.+.+++.+.... |....|.+++|+++++++.
T Consensus 9 ~~~~~~i~~~~~~~~---~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 85 (401)
T 7aat_A 9 MGPPDPILGVTEAFK---RDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELAL 85 (401)
T ss_dssp CCCCCHHHHHHHHHH---HCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHh---hCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhc
Confidence 344555555553222 145567999999997 5542 24577777766542 4456789999999999999
Q ss_pred hhcCCCCCCCCcEEe--cCchHHHHHHHHHHhc---cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHH
Q 043334 663 SNFGFPIDINAEFIY--ADCSQSLFNKLVLCCI---LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKT 737 (903)
Q Consensus 663 ~~~G~~~~pe~~I~v--t~Gs~~al~~ll~~l~---~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~ 737 (903)
+.+|...+++ +|++ |+|+++++..++..+. +|||.|++++|+|..|...++..|++++.+|++.++++.+|++.
T Consensus 86 ~~~~~~~~~~-~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 164 (401)
T 7aat_A 86 GENSEAFKSG-RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTG 164 (401)
T ss_dssp CTTCHHHHTT-CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHH
T ss_pred CCCccccccC-ceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHH
Confidence 8888776666 8877 9999999998876665 89999999999999999999999999999999755578899998
Q ss_pred HHHHhhc--CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCC
Q 043334 738 LVTILET--VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSST 815 (903)
Q Consensus 738 L~~~l~~--~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~ 815 (903)
+++.+.. ...+++++++|| ||||.+++.+++++|+++|+++|++||+||+|.++.|++...+.++ +..+...
T Consensus 165 l~~~l~~~~~~~~~v~i~~p~-NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~----~~~~~~~- 238 (401)
T 7aat_A 165 AMEDISKIPEKSIILLHACAH-NPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWA----LRHFIEQ- 238 (401)
T ss_dssp HHHHHTTSCTTCEEEEESSSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHH----HHHHHHT-
T ss_pred HHHHHHhCCCCcEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHH----HHHHHhc-
Confidence 8777753 122588999998 9999999999999999999999999999999999888653211111 2222122
Q ss_pred CCCCceEEEccCchhcccccceeeEEEe--CcHH----HHHHHHhCCC--CCCCcHHHHHHHHHHHhcccc-cchhHHHH
Q 043334 816 NSSFNVSLLGGLSLKMLTGALKFGFLVL--NHPQ----LVDAFSSFPG--LSKPHSTVRYAIKKLLGLRER-KARDLMNA 886 (903)
Q Consensus 816 ~~~~~vI~l~S~SK~~g~~GlRiG~lv~--~~~~----li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~-~~~~~~~~ 886 (903)
.+++|+++||||+||++|+|+||+++ .+++ +++.+..... ..+++...|.++..++. ++ ..+.+.++
T Consensus 239 --~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~ 314 (401)
T 7aat_A 239 --GIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILN--TPELRKEWLVE 314 (401)
T ss_dssp --TCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH--CHHHHHHHHHH
T ss_pred --CCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhC--CHHHHHHHHHH
Confidence 15899999999999999999999987 2333 4455554432 56677888998888884 22 11123567
Q ss_pred HHHHHHHHHHHHHHHh
Q 043334 887 VAEHIRNLESRSKRLK 902 (903)
Q Consensus 887 l~~~r~~y~~Rr~~l~ 902 (903)
++++++.|+++|+.+.
T Consensus 315 ~~~~~~~~~~~r~~l~ 330 (401)
T 7aat_A 315 VKGMADRIISMRTQLV 330 (401)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8889999999998875
No 24
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=8.1e-32 Score=306.70 Aligned_cols=291 Identities=17% Similarity=0.236 Sum_probs=234.4
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC---CCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQS---FLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQ 659 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p---~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~ 659 (903)
.++++.++..+.+..+. ... .....+++.|+|+.|.+ ++++++.+.+++.+.+.. |....|..++++++++
T Consensus 12 ~~~~~~~~~~~~~~~~~-~~~-~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~ 89 (406)
T 1xi9_A 12 ASKRALSVEYAIRDVVL-PAR-ELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVE 89 (406)
T ss_dssp CCHHHHTCCC--------CHH-HHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHH
T ss_pred HHHHHhcCChhHHHHHH-HHH-HHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHH
Confidence 45667777777665554 211 11235788999999999 788889999998888763 4445678899999999
Q ss_pred HHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHH
Q 043334 660 YIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLV 739 (903)
Q Consensus 660 ~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~ 739 (903)
++.+.+|++.+++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+|++.+++|.+|+++|+
T Consensus 90 ~l~~~~g~~~~~~-~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 168 (406)
T 1xi9_A 90 REKRKNGVDITPD-DVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR 168 (406)
T ss_dssp HHHHHHCCCCCGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred HHHHhcCCCCCHH-HEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHH
Confidence 9999889887776 999999999999999999999999999999999999999999999999999975457889999999
Q ss_pred HHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCC
Q 043334 740 TILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSF 819 (903)
Q Consensus 740 ~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~ 819 (903)
+.+++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|..+.|++... + +..++ + +
T Consensus 169 ~~l~~~~-~~v~i~~p~-nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~---~----~~~~~--~---~ 234 (406)
T 1xi9_A 169 KKITDRT-KAIAVINPN-NPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI---S----PGSLT--K---D 234 (406)
T ss_dssp HHCCTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC---C----HHHHC--S---S
T ss_pred HhhCcCc-eEEEEECCC-CCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCC---C----HHHcC--C---C
Confidence 9998755 589999997 999999999999999999999999999999999988844331 2 22232 2 4
Q ss_pred c-eEEEccCchhcccccceeeEEE--eCc----HHHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHH
Q 043334 820 N-VSLLGGLSLKMLTGALKFGFLV--LNH----PQLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHI 891 (903)
Q Consensus 820 ~-vI~l~S~SK~~g~~GlRiG~lv--~~~----~~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r 891 (903)
+ +++++||||.+|++|+|+||++ +++ + +++.+..... ..+++.+.|.++..+|+ .. .+++++++
T Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~-l~~~l~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~ 306 (406)
T 1xi9_A 235 VPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE-VREAIDRLARIRLCPNTPAQFAAIAGLT--GP-----MDYLKEYM 306 (406)
T ss_dssp SCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHH-HHHHHHHHHHHTCCSCSHHHHHHHHHHH--SC-----CHHHHHHH
T ss_pred ceEEEEeccccccCCCccEEEEEEEecCchhHHH-HHHHHHHHHHhhcCCCHHHHHHHHHHHh--CC-----cHHHHHHH
Confidence 7 9999999999999999999999 887 6 8888876543 26788899999999994 22 13467777
Q ss_pred HHHHHHHHHHh
Q 043334 892 RNLESRSKRLK 902 (903)
Q Consensus 892 ~~y~~Rr~~l~ 902 (903)
+.++++++.+.
T Consensus 307 ~~~~~~~~~l~ 317 (406)
T 1xi9_A 307 KKLKERRDYIY 317 (406)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888877764
No 25
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=1.1e-31 Score=307.62 Aligned_cols=295 Identities=11% Similarity=0.084 Sum_probs=240.2
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-------cCCCCCchHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-------QNMSESEIDVTPSIQQ 659 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-------y~~~~G~~~lr~ala~ 659 (903)
+++++.....+.+..+..... .++.|+|+.|.+++++++.+.+++.+.+.. |....|..++++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~ 88 (429)
T 1yiz_A 15 LPKRYQGSTKSVWVEYIQLAA------QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSK 88 (429)
T ss_dssp SSSSCCCCTTCHHHHHHHHHH------HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHH
T ss_pred hhHHhhhCCchHHHHHHHHhc------cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHH
Confidence 456677777777766654321 246899999999988899999999888753 4445578999999999
Q ss_pred HHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCC--------Cc
Q 043334 660 YIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEV--------GF 731 (903)
Q Consensus 660 ~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~--------~f 731 (903)
++++.+|.+.+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+|++.++ +|
T Consensus 89 ~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 168 (429)
T 1yiz_A 89 LYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADW 168 (429)
T ss_dssp HHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGC
T ss_pred HHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCc
Confidence 9999889776654479999999999999999999999999999999999999999999999999997643 57
Q ss_pred ccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhh
Q 043334 732 KMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL 811 (903)
Q Consensus 732 ~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l 811 (903)
.+|++.+++.+++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .+ +..+
T Consensus 169 ~~d~~~l~~~l~~~~-~~v~~~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~ 240 (429)
T 1yiz_A 169 VLDNNELEALFNEKT-KMIIINTPH-NPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEH--IR----ICTL 240 (429)
T ss_dssp BCCHHHHHHHCCTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCC--CC----GGGS
T ss_pred ccCHHHHHHHhccCc-eEEEECCCC-CCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCC--cC----hhhc
Confidence 899999999987655 589999997 999999999999999999999999999999999998876542 11 1222
Q ss_pred ccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhccc---ccchhHHHH
Q 043334 812 YSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRE---RKARDLMNA 886 (903)
Q Consensus 812 ~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~---~~~~~~~~~ 886 (903)
+.. .++++++.|+||.+|++|+|+||++++++ +++.+.... ...+.+.+.|.++..+|+... + .++++
T Consensus 241 ~~~---~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~---~~~~~ 313 (429)
T 1yiz_A 241 PGM---WERTITIGSAGKTFSLTGWKIGWAYGPEA-LLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLK---SPECY 313 (429)
T ss_dssp TTT---GGGEEEEEEHHHHHTCGGGCCEEEESCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTT---STTSH
T ss_pred cCC---cCceEEEecchhccCCCCcceEEEEeCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHhccccccc---chHHH
Confidence 211 24899999999999999999999999877 888887653 366788999999999995200 2 11356
Q ss_pred HHHHHHHHHHHHHHHh
Q 043334 887 VAEHIRNLESRSKRLK 902 (903)
Q Consensus 887 l~~~r~~y~~Rr~~l~ 902 (903)
++++++.++++++.+.
T Consensus 314 ~~~~~~~~~~~~~~l~ 329 (429)
T 1yiz_A 314 FNSISGELMAKRDYMA 329 (429)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7788888888887764
No 26
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=7.4e-32 Score=309.78 Aligned_cols=286 Identities=16% Similarity=0.271 Sum_probs=228.4
Q ss_pred CCHHHHHHHHhhhhccCCCCCeEEccCCCCC----CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcC
Q 043334 596 RSAISVLNSAELSITETPNSGLIHMDVDQSF----LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFG 666 (903)
Q Consensus 596 ~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~----~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G 666 (903)
.++++.+...-. ....+++++|+|+.|.++ +++++.+++++.+.+.. |.+..|..++++++++++.+. |
T Consensus 36 ~~~i~~~~~~~~-~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~ 113 (427)
T 3dyd_A 36 FNPIRAIVDNMK-VKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-E 113 (427)
T ss_dssp -----------C-CCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-T
T ss_pred cchHHHHHHHHh-hcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-C
Confidence 344666554321 122456678999999985 57899999999888764 445678999999999999765 7
Q ss_pred CCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCC
Q 043334 667 FPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVK 746 (903)
Q Consensus 667 ~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~ 746 (903)
.+.+++ +|++|+|+++++..++..++++||+|+++.|+|..+...++..|++++.++++++++|.+|++.+++.+++++
T Consensus 114 ~~~~~~-~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 192 (427)
T 3dyd_A 114 APLEAK-DVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKT 192 (427)
T ss_dssp BCCCGG-GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTE
T ss_pred CCCChH-HEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCC
Confidence 766666 9999999999999999999999999999999999999999999999999999776788999999999998765
Q ss_pred CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEcc
Q 043334 747 KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGG 826 (903)
Q Consensus 747 ~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S 826 (903)
+++++++|+ ||||.+++.+++++|+++|+++|+++|+||+|.++.|++... .+ +..+... .++++++|
T Consensus 193 -~~v~i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~--~~----~~~~~~~----~~vi~~~S 260 (427)
T 3dyd_A 193 -ACLIVNNPS-NPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKY--EP----LATLSTD----VPILSCGG 260 (427)
T ss_dssp -EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCC--CC----GGGGCSS----CCEEEEEE
T ss_pred -CEEEEECCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcC--cc----HHHhCCC----CcEEEEee
Confidence 589999997 999999999999999999999999999999999999877543 11 2223222 46899999
Q ss_pred CchhcccccceeeEEEeCc------HHHHHHHHhCCC-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 827 LSLKMLTGALKFGFLVLNH------PQLVDAFSSFPG-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 827 ~SK~~g~~GlRiG~lv~~~------~~li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
|||.|+++|+|+||+++++ +++++.+..... .++++.+.|.++..+|+. .. .+++.++++.++++++
T Consensus 261 ~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~-~~-----~~~~~~~~~~~~~~~~ 334 (427)
T 3dyd_A 261 LAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCR-TP-----GEFYHNTLSFLKSNAD 334 (427)
T ss_dssp STTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHH-SC-----HHHHHHHHHHHHHHHH
T ss_pred ccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh-cC-----HHHHHHHHHHHHHHHH
Confidence 9999999999999999985 347777766543 678899999999999951 11 3566777777777777
Q ss_pred HHh
Q 043334 900 RLK 902 (903)
Q Consensus 900 ~l~ 902 (903)
.+.
T Consensus 335 ~l~ 337 (427)
T 3dyd_A 335 LCY 337 (427)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 27
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.4e-31 Score=298.64 Aligned_cols=266 Identities=11% Similarity=0.103 Sum_probs=228.0
Q ss_pred cCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 611 ETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 611 ~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
...|+++|||+.|++++++++.+.+++.+.+.+ |.. .| .++++++++++.+.+|.+.+++ +|++|+|+++++.
T Consensus 19 d~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~-~i~~t~g~~~a~~ 95 (377)
T 3fdb_A 19 TRYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARPE-WIFPIPDVVRGLY 95 (377)
T ss_dssp HSSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGG-GEEEESCHHHHHH
T ss_pred eccCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHH-HEEEeCChHHHHH
Confidence 346789999999999999999999999988764 344 56 8899999999999999887776 9999999999999
Q ss_pred HHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCH
Q 043334 687 KLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSN 766 (903)
Q Consensus 687 ~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ 766 (903)
.++.+++++||+|+++.|+|..+...++..|++++.+|++.+ +|++++++.+++++ +++++++|+ ||||.+++.
T Consensus 96 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~-~~v~i~~p~-nptG~~~~~ 169 (377)
T 3fdb_A 96 IAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGA-RSILLCNPY-NPLGMVFAP 169 (377)
T ss_dssp HHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTC-CEEEEESSB-TTTTBCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCC-CEEEEeCCC-CCCCCCCCH
Confidence 999999999999999999999999999999999999999753 89999999998876 599999997 999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEecCCCCCccCC-CCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCc
Q 043334 767 KEIENILTVCAKYGARVVIDTAFSGLEFNY-EGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNH 845 (903)
Q Consensus 767 eel~eI~~ia~k~~i~VI~DeaY~~l~f~~-~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~ 845 (903)
+++++|+++|+++|+++|+||+|..+.|++ ... .+ +..++.. +++++++||||.+|++|+|+||+++++
T Consensus 170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~--~~----~~~~~~~----~~~i~~~s~sK~~g~~G~r~G~~~~~~ 239 (377)
T 3fdb_A 170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTV--AA----GVSDTAA----SVCITITAPSKAWNIAGLKCAQIIFSN 239 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCC--GG----GSCHHHH----HHEEEEECSTTTTTCGGGCCEEEECCS
T ss_pred HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCc--cc----HHHccCC----CcEEEEEeChHhccCcchhheEEEeCC
Confidence 999999999999999999999999988877 332 11 1122221 489999999999999999999999866
Q ss_pred HHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 846 PQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 846 ~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++++.+..... ..+++.+.|.++..+|. +. +++++++++.++++++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l~ 291 (377)
T 3fdb_A 240 PSDAEHWQQLSPVIKDGASTLGLIAAEAAYR--YG-----TDFLNQEVAYLKNNHDFLL 291 (377)
T ss_dssp HHHHHHHHHSCHHHHCCCCHHHHHHHHHHHH--HC-----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHh--cc-----HHHHHHHHHHHHHHHHHHH
Confidence 559999988764 57889999999999994 22 3567777788888777664
No 28
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2.9e-32 Score=310.71 Aligned_cols=301 Identities=10% Similarity=0.022 Sum_probs=218.1
Q ss_pred HhhhhccCCCCHHHHHHH-HhhhhccCCCCCeEEccCCCC-CCCCcHHHHHHHHHHHH----ccCCCCCchHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNS-AELSITETPNSGLIHMDVDQS-FLPIPSLVKAAIFESFA----RQNMSESEIDVTPSIQQY 660 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~-a~~a~~~~~~~~~IdLs~g~p-~~~~p~~v~~al~~al~----~y~~~~G~~~lr~ala~~ 660 (903)
++.++..++++.+..+.. .+. ...+++|+|++|.+ +++.++.+.+++.++.. .|.+..|.+++|++++++
T Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~ 91 (409)
T 4eu1_A 16 TQGPGSMGKPDPILGLGQDFRM----DPAKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKL 91 (409)
T ss_dssp -----------CHHHHHHHHHH----CCCSSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHH
T ss_pred HhhcCCCCCCChHHHHHHHHhh----CCCcCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHH
Confidence 566777777776555553 333 45678999999997 87777677777766532 255567889999999999
Q ss_pred HHhhcCCCCCCCCcE--EecCchHHHHHHH---HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCH
Q 043334 661 IKSNFGFPIDINAEF--IYADCSQSLFNKL---VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTE 735 (903)
Q Consensus 661 l~~~~G~~~~pe~~I--~vt~Gs~~al~~l---l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~ 735 (903)
+....+.+.+++ +| ..|.|+++++..+ +.+++++||.|++++|+|+.|...++..|++++.+|+..+++|.+|+
T Consensus 92 ~~~~~~~~~~~~-~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 170 (409)
T 4eu1_A 92 CFGPTCAALRDG-RIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNL 170 (409)
T ss_dssp HHCSSCHHHHTT-CEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECH
T ss_pred HcCCCchhhccC-ceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcH
Confidence 843222222233 67 4488888877754 55667899999999999999999999999999999996556788999
Q ss_pred HHHHHHhhc--CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc
Q 043334 736 KTLVTILET--VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS 813 (903)
Q Consensus 736 ~~L~~~l~~--~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~ 813 (903)
+++++.+++ .++.++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++...+.. + +..+.+
T Consensus 171 ~~l~~~l~~~~~~~~~i~~~~p~-NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~---~-~~~~~~ 245 (409)
T 4eu1_A 171 AGMLECLDKAPEGSVILVHACAH-NPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAF---V-PRHLVD 245 (409)
T ss_dssp HHHHHHHHHSCTTCEEEEESSSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTH---H-HHHHHT
T ss_pred HHHHHHHHhCCCCcEEEEECCCC-CCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchH---H-HHHHHh
Confidence 999999873 333466669997 999999999999999999999999999999999988876210001 1 122212
Q ss_pred CCCCCCceEEEccCchhcccccceeeEE--EeCcHH----HHHHHHhCCC--CCCCcHHHHHHHHHHHhccccc-chhHH
Q 043334 814 STNSSFNVSLLGGLSLKMLTGALKFGFL--VLNHPQ----LVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERK-ARDLM 884 (903)
Q Consensus 814 ~~~~~~~vI~l~S~SK~~g~~GlRiG~l--v~~~~~----li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~-~~~~~ 884 (903)
. .+++|+++||||+||++|+|+||+ ++++++ +++.+..... ..+++.+.|.++..+|. ++. .+.+.
T Consensus 246 ~---~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~ 320 (409)
T 4eu1_A 246 M---VPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILK--DPQLTALWK 320 (409)
T ss_dssp T---SSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH--CHHHHHHHH
T ss_pred h---CCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhC--CHHHHHHHH
Confidence 2 147999999999999999999998 777665 5566655432 56778999999999994 220 11234
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 043334 885 NAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 885 ~~l~~~r~~y~~Rr~~l~ 902 (903)
++++++++.|++|++.+.
T Consensus 321 ~~~~~~~~~~~~~~~~l~ 338 (409)
T 4eu1_A 321 KELKQMSSRIAEVRKRLV 338 (409)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 567888999999998875
No 29
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=4e-31 Score=297.14 Aligned_cols=271 Identities=13% Similarity=0.173 Sum_probs=226.3
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHcc--CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQ--NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y--~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
.++++|+|+.|++++++++.+.+++.+.+.+. .+.....++++++++++++.+|.+.+++ +|++|+|+++++..++.
T Consensus 22 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~-~v~~~~g~~~a~~~~~~ 100 (383)
T 3kax_A 22 KNEELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKE-WIVFSAGIVPALSTSIQ 100 (383)
T ss_dssp SSSCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGG-GEEEESCHHHHHHHHHH
T ss_pred CCCCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEEcCCHHHHHHHHHH
Confidence 45789999999999999999999999988652 2223367899999999999999776666 99999999999999999
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCC-CcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEV-GFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~-~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
+++++||+|+++.|+|..+...++..|++++.++++.++ +|.+|++++++++++++ +++++++|+ ||||.+++.+++
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~v~i~~p~-nptG~~~~~~~l 178 (383)
T 3kax_A 101 AFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGV-KLMLLCSPH-NPIGRVWKKEEL 178 (383)
T ss_dssp HHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTC-CEEEEESSB-TTTTBCCCHHHH
T ss_pred HhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCC-eEEEEeCCC-CCCCcCcCHHHH
Confidence 999999999999999999999999999999999997543 48899999999997666 589999997 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc-CCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS-STNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~-~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
++|+++|+++|++||+||+|.++.+++... .+ +..+.. . .+++++++||||.+|++|+|+||++++++++
T Consensus 179 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~~~~~---~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 249 (383)
T 3kax_A 179 TKLGSLCTKYNVIVVADEIHSDIIYADHTH--TP----FASLSEEL---AARTITCMAPSKTFNIAGLQASIIIIPNEKL 249 (383)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCC--CC----GGGSCHHH---HTTEEEEECSHHHHTCGGGCCEEEECCCHHH
T ss_pred HHHHHHHHHCCCEEEEEccccccccCCCCc--ee----HhhcCccc---cCcEEEEEEChhhccCcchhheEEEeCCHHH
Confidence 999999999999999999999988877542 11 111211 0 1479999999999999999999999965558
Q ss_pred HHHHHhCCC---CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 849 VDAFSSFPG---LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 849 i~~l~~~~~---~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.+..... ..+++.+.|.++..+|. .. ++++++.++.++++++.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l~ 299 (383)
T 3kax_A 250 RQAFTSIQYRQGFHGLNIFAYTAMQSAYT--EC-----NDWLNEIRFYIEDNAKFAC 299 (383)
T ss_dssp HHHHHHHHHHTTCCCCCHHHHHHHHHHTT--TC-----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCCCCHHHHHHHHHHHH--hh-----HHHHHHHHHHHHHHHHHHH
Confidence 888876542 45789999999999994 22 3566777777777776654
No 30
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.98 E-value=3.7e-31 Score=299.41 Aligned_cols=297 Identities=13% Similarity=0.051 Sum_probs=226.9
Q ss_pred ccCCCCHHHHHHHHhhhhccCCCCCeEEccCC---CCCCCCc--HHHHHHHHH-HHHc-----cCCCCCchHHHHHHHHH
Q 043334 592 IGFSRSAISVLNSAELSITETPNSGLIHMDVD---QSFLPIP--SLVKAAIFE-SFAR-----QNMSESEIDVTPSIQQY 660 (903)
Q Consensus 592 ~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g---~p~~~~p--~~v~~al~~-al~~-----y~~~~G~~~lr~ala~~ 660 (903)
...+.+.+..+..... ....+++|+|+.| +++.++| +.+.+++.+ .+.. |....|.+++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 82 (397)
T 3fsl_A 6 DAYAGDPILTLMERFK---EDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPL 82 (397)
T ss_dssp CCCCCCHHHHHHHHHH---TCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHH
T ss_pred CCCCCCchhhHHHHHh---cCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHH
Confidence 4456667776664322 2456789999999 5665544 899999998 7753 44557889999999999
Q ss_pred HHhhcCCCCCCCC-cEEecCchHHHHHHHH--HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHH
Q 043334 661 IKSNFGFPIDINA-EFIYADCSQSLFNKLV--LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKT 737 (903)
Q Consensus 661 l~~~~G~~~~pe~-~I~vt~Gs~~al~~ll--~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~ 737 (903)
+...++...+++. +|++|+|+++++..++ .+++++||+|+++.|+|..+...++..|++++.+++..++++.+|+++
T Consensus 83 ~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 162 (397)
T 3fsl_A 83 LFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFND 162 (397)
T ss_dssp HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHH
T ss_pred HhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHH
Confidence 9876554334332 6999999999999984 566899999999999999999999999999999999544578899999
Q ss_pred HHHHhhcC--CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCC
Q 043334 738 LVTILETV--KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSST 815 (903)
Q Consensus 738 L~~~l~~~--~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~ 815 (903)
+++.++.. ...++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.+++... . ..+..+....
T Consensus 163 l~~~l~~~~~~~~~v~~~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~----~-~~~~~~~~~~ 236 (397)
T 3fsl_A 163 LLATLKTLQAGSIVLLHPCCH-NPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEED----A-YAIRAIASAG 236 (397)
T ss_dssp HHHHHTTCCTTCEEEECSSSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGG----G-HHHHHHHHTT
T ss_pred HHHHHHhCCCCCEEEEeCCCC-CCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccc----c-HHHHHHHhcC
Confidence 99999732 22478888997 999999999999999999999999999999999998874221 0 1122232222
Q ss_pred CCCCceEEEccCchhcccccceeeEEEe--CcHHHHHHHHhC------CCCCCCcHHHHHHHHHHHhccccc-chhHHHH
Q 043334 816 NSSFNVSLLGGLSLKMLTGALKFGFLVL--NHPQLVDAFSSF------PGLSKPHSTVRYAIKKLLGLRERK-ARDLMNA 886 (903)
Q Consensus 816 ~~~~~vI~l~S~SK~~g~~GlRiG~lv~--~~~~li~~l~~~------~~~~~~s~~~Q~aa~~~L~~~~~~-~~~~~~~ 886 (903)
+++++++||||.+|++|+|+||+++ ++.++++.+... ....+++.+.|.++..+|. ++. ...+.++
T Consensus 237 ---~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~l~~~~~~~ 311 (397)
T 3fsl_A 237 ---LPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN--DEALKASWLKE 311 (397)
T ss_dssp ---CCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHT--SHHHHHHHHHH
T ss_pred ---CCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhc--CHHHHHHHHHH
Confidence 5899999999999999999999985 444355544321 2355678899999998884 221 1113577
Q ss_pred HHHHHHHHHHHHHHHh
Q 043334 887 VAEHIRNLESRSKRLK 902 (903)
Q Consensus 887 l~~~r~~y~~Rr~~l~ 902 (903)
++++++.++++++.+.
T Consensus 312 ~~~~~~~~~~~~~~l~ 327 (397)
T 3fsl_A 312 VEEMRTRILAMRQELV 327 (397)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8889999999988875
No 31
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.98 E-value=5.3e-31 Score=296.96 Aligned_cols=273 Identities=14% Similarity=0.093 Sum_probs=227.0
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHHcc--CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFARQ--NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y--~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
..+.++|+|+.|++++++++.+.+++.+.+.+. .+.....++++++++++++.+|.+.+++ +|++|+|+++++..++
T Consensus 24 ~~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~-~i~~~~g~~~a~~~~~ 102 (391)
T 3dzz_A 24 VLKEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESVPAEYYKAVADWEEIEHRARPKED-WCVFASGVVPAISAMV 102 (391)
T ss_dssp TCCTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHSCCCCGG-GEEEESCHHHHHHHHH
T ss_pred ccCCCceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCHH-HEEECCCHHHHHHHHH
Confidence 356689999999999999999999999988652 2223367899999999999999777766 9999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCC-CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTE-SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~-~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
.+++++||+|+++.|+|..+...++..|++++.+|++ .+++|.+|++++++++++...++|++++|+ ||||.++|.++
T Consensus 103 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~-nptG~~~~~~~ 181 (391)
T 3dzz_A 103 RQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPH-NPIGYAWSEEE 181 (391)
T ss_dssp HHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSB-TTTTBCCCHHH
T ss_pred HHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCC-CCCCcccCHHH
Confidence 9999999999999999999999999999999999996 345688999999999983333589999997 99999999999
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhc-cCCCCCCceEEEccCchhcccccceeeEEEeCcHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLY-SSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQ 847 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~-~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~ 847 (903)
+++|+++|+++|++||+||+|+++.+.+... .+ +..+. ..+ ++++++.|+||.+|++|+|+||+++++++
T Consensus 182 l~~i~~~~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~~~~~~---d~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 252 (391)
T 3dzz_A 182 VKRIAELCAKHQVLLISDEIHGDLVLTDEDI--TP----AFTVDWDAK---NWVVSLISPSKTFNLAALHAACAIIPNPD 252 (391)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBCSSCCC--CC----GGGSCTTTG---GGEEEEECSHHHHTCTTTCCEEEECCSHH
T ss_pred HHHHHHHHHHCCCEEEEecccccccCCCCCc--ee----hhhcCcccc---CcEEEEEeChhhccccchhheEEEECCHH
Confidence 9999999999999999999999988877542 11 22222 111 58999999999999999999999998555
Q ss_pred HHHHHHhCC---CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 848 LVDAFSSFP---GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 848 li~~l~~~~---~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.+.... ...+++.+.|.++..+|. .. .+++++.++.++++++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l~ 303 (391)
T 3dzz_A 253 LRARAEESFFLAGIGEPNLLAIPAAIAAYE--EG-----HDWLRELKQVLRDNFAYAR 303 (391)
T ss_dssp HHHHHHHHHHHHTCSSCCTTHHHHHHHHHH--HC-----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHh--cc-----HHHHHHHHHHHHHHHHHHH
Confidence 888887663 356788899999998884 22 3566777777777776654
No 32
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.98 E-value=2e-31 Score=305.73 Aligned_cols=278 Identities=14% Similarity=0.080 Sum_probs=228.0
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..++++|+|+.|+|++++++.+.+++.+.+.. |....|..++|+++++++.+.+|++.+++ +|++|+|+++++.
T Consensus 41 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~-~i~~t~g~t~al~ 119 (437)
T 3g0t_A 41 ATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPAR-ACVPTVGSMQGCF 119 (437)
T ss_dssp HHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEESHHHHHHH
T ss_pred hcCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcc-cEEEeCCHHHHHH
Confidence 35778999999999999999999999887752 45556789999999999999999888777 9999999999999
Q ss_pred HHHHHhc--cCCC--eEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh-hcCCCcEEEEECCCCCCcc
Q 043334 687 KLVLCCI--LEGG--TLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL-ETVKKPWVYISGPTINPTG 761 (903)
Q Consensus 687 ~ll~~l~--~pGD--~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l-~~~~~~~vil~~P~~NPTG 761 (903)
.++.+++ ++|| +|+++.|+|..+...++..|++++.++++ +++|.+|++++++++ ++++ ++|++++|+ ||||
T Consensus 120 ~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~-~~v~l~~p~-nptG 196 (437)
T 3g0t_A 120 VSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQTGQF-CSIIYSNPN-NPTW 196 (437)
T ss_dssp HHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTTTCC-CEEEEESSC-TTTC
T ss_pred HHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhcCCc-eEEEEeCCC-CCCC
Confidence 9999998 9999 99999999999999999999999999997 467889999999999 5555 589999997 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL 841 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l 841 (903)
.+++.+++++|+++|+++|++||+||+|+.+.|++.. +....+++...+.... +++++++||||.+|++|+|+||+
T Consensus 197 ~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~~~~G~r~G~~ 272 (437)
T 3g0t_A 197 QCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDY-SHPGEPLYQPSVANYT---DNYILALSSSKAFSYAGQRIGVL 272 (437)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCC-CSTTSSCCCCCGGGTC---SCEEEEEESTTTTSCGGGCCEEE
T ss_pred CcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCc-CcccccchhhccCCCC---CcEEEEEcCccCCCCccceeEEE
Confidence 9999999999999999999999999999988887432 1100001102222322 58999999999999999999999
Q ss_pred EeCcHHHHH-H-----------------HHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 842 VLNHPQLVD-A-----------------FSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 842 v~~~~~li~-~-----------------l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
+++++ +++ . +..... ..+++.+.|.++..+|. .. +.++.++++.++.++++++.+
T Consensus 273 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~--~~~~~~~~~~~~~~~~~~~~l 347 (437)
T 3g0t_A 273 MISGK-LYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLK--AC--NDGEYNFRDSVIEYGRKARIM 347 (437)
T ss_dssp EECHH-HHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHH--HH--HTTSCCHHHHHHHHHHHHHHH
T ss_pred EECHH-HhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHh--Cc--HhHHHHHHHHHHHHHHHHHHH
Confidence 99977 888 6 655443 56789999999999994 22 101112677777777777766
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 348 ~ 348 (437)
T 3g0t_A 348 K 348 (437)
T ss_dssp H
T ss_pred H
Confidence 4
No 33
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.98 E-value=7.9e-31 Score=295.59 Aligned_cols=271 Identities=11% Similarity=0.132 Sum_probs=227.6
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc--cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR--QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~--y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
.+.++|+|+.|++++++|+.+.+++.+.+.+ +.+..+..++++++++++++.+|.+.+++ +|++|+|+++++..++.
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~-~v~~~~g~~~a~~~~~~ 108 (391)
T 4dq6_A 30 GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSE-WLIYSPGVIPAISLLIN 108 (391)
T ss_dssp SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEESCHHHHHHHHHH
T ss_pred CCCCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcHH-HeEEcCChHHHHHHHHH
Confidence 3578999999999999999999999998864 23344678999999999999999766666 99999999999999999
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCC--CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTE--SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~--~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
+++++||+|+++.|+|..+...++..|++++.+|++ .+++|.+|++++++++++ + +++++++|+ ||||.+++.++
T Consensus 109 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~-~~v~i~~p~-nptG~~~~~~~ 185 (391)
T 4dq6_A 109 ELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-V-KLFILCNPH-NPVGRVWTKDE 185 (391)
T ss_dssp HHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-E-EEEEEESSB-TTTTBCCCHHH
T ss_pred HhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-C-CEEEEECCC-CCCCcCcCHHH
Confidence 999999999999999999999999999999999997 456788999999999987 4 689999997 99999999999
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
+++|+++|+++|+++|+||+|.++.+++... .+ +..+.... .+++++++||||.+|++|+|+||++++++++
T Consensus 186 l~~i~~~~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~ 257 (391)
T 4dq6_A 186 LKKLGDICLKHNVKIISDEIHSDIILKKHKH--IP----MASISKEF--EKNTITCMAPTKTFNIAGLQSSYVVLPDEKD 257 (391)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBCTTCCC--CC----GGGSCHHH--HHTEEEEECSHHHHTCGGGCCEEEECCSHHH
T ss_pred HHHHHHHHHHcCCEEEeeccccccccCCCCc--cC----HHHcCccc--cCcEEEEEechhhccCcccceEEEEeCCHHH
Confidence 9999999999999999999999988877543 11 11121100 1378999999999999999999999998448
Q ss_pred HHHHHhCC---CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 849 VDAFSSFP---GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 849 i~~l~~~~---~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.+.... ...+++.+.|.++..+|. .. ++++++.++.++++++.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l~ 307 (391)
T 4dq6_A 258 YKLLDDAFTRIDIKRNNCFSLVATEASYN--NG-----ESWLESFLEYLESNIDFAI 307 (391)
T ss_dssp HHHHHHHHHHTTCCCCCHHHHHHHHHHHH--HC-----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHh--ch-----HHHHHHHHHHHHHHHHHHH
Confidence 88887653 255788999999999884 22 2567777777777777654
No 34
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.98 E-value=6.3e-31 Score=308.62 Aligned_cols=268 Identities=13% Similarity=0.146 Sum_probs=216.3
Q ss_pred cHHHHHHHHHHHHc--------cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc-cCCCeEE
Q 043334 630 PSLVKAAIFESFAR--------QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI-LEGGTLC 700 (903)
Q Consensus 630 p~~v~~al~~al~~--------y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~-~pGD~Vl 700 (903)
|..+++++.+.+.. |....|.+++|+++++++.+++|.+.+++ +|++|+|+++++..++.+++ ++||.|+
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~~gd~Vl 186 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANAD-DIFLTDGASPGVHLMMQLLIRNEKDGIL 186 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGG-GEEEESSSHHHHHHHHHHHCCSTTEEEE
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcc-cEEEcCCHHHHHHHHHHHHcCCCCCEEE
Confidence 44455555555543 44567899999999999999999888777 99999999999999999998 8999999
Q ss_pred EcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC-----CCcEEEEECCCCCCcccCCCHHHHHHHHHH
Q 043334 701 FPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV-----KKPWVYISGPTINPTGLLYSNKEIENILTV 775 (903)
Q Consensus 701 v~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-----~~~~vil~~P~~NPTG~v~s~eel~eI~~i 775 (903)
++.|+|+.|...++..|++++.++++++++|.+|++.|++++++. ..++|++++|+ ||||.++|.+++++|+++
T Consensus 187 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~-NPtG~~~s~~~l~~i~~l 265 (500)
T 3tcm_A 187 VPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPG-NPTGQVLAEENQYDIVKF 265 (500)
T ss_dssp EEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSC-TTTCCCCCHHHHHHHHHH
T ss_pred EeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCC-CCCcccCCHHHHHHHHHH
Confidence 999999999999999999999999998778999999999998862 23589999997 999999999999999999
Q ss_pred HHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceeeEEEe---CcHHHHHH
Q 043334 776 CAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGFLVL---NHPQLVDA 851 (903)
Q Consensus 776 a~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~---~~~~li~~ 851 (903)
|+++|++||+||+|..+.|++.. .+.++......+.... .+.++|+++||||+| |++|+|+||+++ +++ +++.
T Consensus 266 a~~~~~~li~Deay~~~~~~~~~-~~~s~~~~~~~~~~~~-~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~-~~~~ 342 (500)
T 3tcm_A 266 CKNEGLVLLADEVYQENIYVDNK-KFHSFKKIVRSLGYGE-EDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAP-VREQ 342 (500)
T ss_dssp HHHHTCEEEEECTTTTCBCCTTC-CCCCHHHHHHHTTCSS-SCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTT-HHHH
T ss_pred HHHcCCEEEEecCccccccCCCC-CCCcHHHHHHHhcccc-CCeEEEEEecCCccCCCCCccceEEEEEeCCCHH-HHHH
Confidence 99999999999999999996532 1123322222331101 024689999999999 899999999998 665 8888
Q ss_pred HHhCCC-CCCCcHHHHHHHHHHHhccc---ccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 852 FSSFPG-LSKPHSTVRYAIKKLLGLRE---RKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 852 l~~~~~-~~~~s~~~Q~aa~~~L~~~~---~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+... .++++.+.|.++..++.... +..+.+.+++.++++.|++|++.+.
T Consensus 343 l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 397 (500)
T 3tcm_A 343 IYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALE 397 (500)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877654 67889999999999994111 1112355677888889999998875
No 35
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.98 E-value=7.2e-31 Score=294.68 Aligned_cols=282 Identities=16% Similarity=0.229 Sum_probs=231.4
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIK 662 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~ 662 (903)
+++++..++.+.++.+...... ....+++.|+|+.|.+++++++.+.+++.+.+.. |....|..++++++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~ 80 (370)
T 2z61_A 2 LSKRLLNFESFEVMDILALAQK-LESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYK 80 (370)
T ss_dssp CCHHHHHCCCCTTHHHHHHHHH-HHHTTCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhhhhhccccHHHHHHHHHHH-HHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHH
Confidence 4566667777777766642111 1134678999999999988889999999888754 4445678999999999999
Q ss_pred hhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh
Q 043334 663 SNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 663 ~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+.+|++.+++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+| +|++++++.+
T Consensus 81 ~~~g~~~~~~-~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l 151 (370)
T 2z61_A 81 DKYKADIIPD-NIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEAL 151 (370)
T ss_dssp HHSSCCCCGG-GEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHC
T ss_pred HHhCCCCChh-hEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhc
Confidence 9899887777 999999999999999999999999999999999999999999999999997 5789999998
Q ss_pred hcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 743 ETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 743 ~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
++++ ++|++++|+ ||||.+++.+ |.++|+++|++||+||+|..+.+++... + +..+++. .++++
T Consensus 152 ~~~~-~~v~~~~p~-nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~~~---~----~~~~~~~---~~~~i 215 (370)
T 2z61_A 152 SDKT-KAIIINSPS-NPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGKCY---S----AIEFDEN---LEKTI 215 (370)
T ss_dssp CSSE-EEEEEESSC-TTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSCCC---C----GGGTCTT---CSSEE
T ss_pred ccCc-eEEEEcCCC-CCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCCCc---C----HHHccCC---CCcEE
Confidence 7655 589999997 9999999976 9999999999999999999888876432 1 1222212 15899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhccc-ccchhHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRE-RKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~-~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
+++||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|+ . + .++++++++.++++++
T Consensus 216 ~~~s~sK~~~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~-----~~~~~~~~~~~~~~~~ 287 (370)
T 2z61_A 216 LINGFSKLYAMTGWRIGYVISNDE-IIEAILKLQQNLFISAPTISQYAALKAFE--KET-----EREINSMIKEFDRRRR 287 (370)
T ss_dssp EEEESTTTTTCGGGCCEEEECCHH-HHHHHHHHHHHHTSSSCHHHHHHHGGGGS--HHH-----HHHHHHHHHHHHHHHH
T ss_pred EEecChhccCCccceEEEEEECHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHh--ccC-----HHHHHHHHHHHHHHHH
Confidence 999999999999999999999987 9988877653 56788999999988883 2 2 3577788888888888
Q ss_pred HHh
Q 043334 900 RLK 902 (903)
Q Consensus 900 ~l~ 902 (903)
.+.
T Consensus 288 ~l~ 290 (370)
T 2z61_A 288 LVL 290 (370)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 36
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.98 E-value=5.1e-31 Score=299.06 Aligned_cols=267 Identities=14% Similarity=0.182 Sum_probs=222.4
Q ss_pred CeEEccCCCCC-CCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 616 GLIHMDVDQSF-LPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 616 ~~IdLs~g~p~-~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+|||+.|++. +++++.+++++.+.+.. |....|..++++++++++++.+|.+.+++++|++|+|+++++..++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV 119 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 48999998876 67888999998888753 5667789999999999999999988765348999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCC----CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCC
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTES----EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYS 765 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~----~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s 765 (903)
.+++++||+|+++.|+|..+...++..|++++.++++. ++++.+|++++++.+++++ +++++++|+ ||||.+++
T Consensus 120 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~v~~~~p~-nptG~~~~ 197 (407)
T 3nra_A 120 AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGA-RVFLFSNPN-NPAGVVYS 197 (407)
T ss_dssp HTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTC-CEEEEESSC-TTTCCCCC
T ss_pred HHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCC-cEEEEcCCC-CCCCcccC
Confidence 99999999999999999999999999999999999842 2567899999999998766 589999997 99999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhc-cCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 766 NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLY-SSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 766 ~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~-~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
.+++++|+++|+++|++||+||+|+.+.|++... .+ +..++ .. .+++++++||||.+|++|+|+||++++
T Consensus 198 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~--~~----~~~~~~~~---~~~~i~~~s~sK~~g~~G~r~G~~~~~ 268 (407)
T 3nra_A 198 AEEIGQIAALAARYGATVIADQLYSRLRYAGASY--TH----LRAEAAVD---AENVVTIMGPSKTESLSGYRLGVAFGS 268 (407)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCC--CC----GGGCTTSC---GGGEEEEECSSSTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--CC----hhhcCccc---CCcEEEEeCcccccCCCeeeEEEEEcC
Confidence 9999999999999999999999999998887653 11 22222 11 258999999999999999999999998
Q ss_pred cHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 845 HPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 845 ~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
++ +++.+..... ..+++.+.|.++..+|. +. .+++++.++.++++++.+
T Consensus 269 ~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l 319 (407)
T 3nra_A 269 RA-IIARMEKLQAIVSLRAAGYSQAVLRGWFD--EA-----PGWMEDRIARHQAIRDEL 319 (407)
T ss_dssp HH-HHHHHHHHHHHHTSSSCHHHHGGGGGTTC--CC-----TTHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHhhhccCCChHHHHHHHHHHh--cc-----chHHHHHHHHHHHHHHHH
Confidence 77 8888887654 56677889998888884 22 134455555566666554
No 37
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.97 E-value=6e-31 Score=308.68 Aligned_cols=268 Identities=15% Similarity=0.191 Sum_probs=209.8
Q ss_pred cHHHHHHHHHHHH--------ccCCCCCchHHHHHHHHHHHhhcC-CCCCCCCcEEecCchHHHHHHHHHHhccCCC---
Q 043334 630 PSLVKAAIFESFA--------RQNMSESEIDVTPSIQQYIKSNFG-FPIDINAEFIYADCSQSLFNKLVLCCILEGG--- 697 (903)
Q Consensus 630 p~~v~~al~~al~--------~y~~~~G~~~lr~ala~~l~~~~G-~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD--- 697 (903)
|..+.+++.+++. .|....|.+++|+++++++++++| ++.+++ +|++|+|+++++..++.+++++||
T Consensus 103 P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~-~i~~t~G~~~ai~~~~~~l~~~gd~~~ 181 (498)
T 3ihj_A 103 PEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPD-NIYLTTGASDGISTILKILVSGGGKSR 181 (498)
T ss_dssp CHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGG-GEEEESSHHHHHHHHHHHHCCCCGGGS
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcc-cEEEcCCHHHHHHHHHHHHcCCCCCCC
Confidence 4444455454443 356678999999999999999884 887777 999999999999999999999876
Q ss_pred -eEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC----CCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 698 -TLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV----KKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 698 -~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~----~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
.|+++.|+|+.|...++..|++++.++++++++|.+|+++|++.+++. ..++|++++|+ ||||.++|.+++++|
T Consensus 182 d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~-NPTG~v~s~~~l~~i 260 (498)
T 3ihj_A 182 TGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPG-NPTGQVQSRKCIEDV 260 (498)
T ss_dssp EEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSC-TTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCC-CCCCCcCCHHHHHHH
Confidence 999999999999999999999999999998778999999999998762 23589999998 999999999999999
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCC-CCCCCchhhhhhhhcc-CCCCCCceEEEccCchhc-ccccceeeEEEe--CcHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYE-GWGGWDLEGCLSKLYS-STNSSFNVSLLGGLSLKM-LTGALKFGFLVL--NHPQ 847 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~-~~s~~s~~~~~~~l~~-~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~--~~~~ 847 (903)
+++|+++|++||+||+|..+.|++. .. .++......+.. .++ +.++|+++||||+| |++|+|+||++. .+++
T Consensus 261 ~~la~~~~~~li~De~y~~~~~~~~~~~--~s~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~ 337 (498)
T 3ihj_A 261 IHFAWEEKLFLLADEVYQDNVYSPDCRF--HSFKKVLYEMGPEYSS-NVELASFHSTSKGYMGECGYRGGYMEVINLHPE 337 (498)
T ss_dssp HHHHHHHTCEEEEECTTTTCBCCTTCCC--CCHHHHHHHTCHHHHT-TCCEEEEEESSSSTTCCSSSCCEEEEEESCCHH
T ss_pred HHHHHHcCcEEEEEcCccccccCCCCCc--CCHHHHHHHhcccccC-ceeEEEEeccccccccCcccceEEEEEecCCHH
Confidence 9999999999999999999999764 22 232222211110 000 13689999999999 889999999994 3344
Q ss_pred HHHHHHhCCC-CCCCcHHHHHHHHHHHhcc---cccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 848 LVDAFSSFPG-LSKPHSTVRYAIKKLLGLR---ERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 848 li~~l~~~~~-~~~~s~~~Q~aa~~~L~~~---~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.+.+... ..+++.+.|.++..++... ++....+.++..++++.|++|++.+.
T Consensus 338 l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~ 396 (498)
T 3ihj_A 338 IKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTE 396 (498)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887654 6788999999988888410 01112233455678888999998875
No 38
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.97 E-value=7.4e-31 Score=297.42 Aligned_cols=270 Identities=10% Similarity=0.083 Sum_probs=222.2
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc--cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR--QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC 692 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~--y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l 692 (903)
.++|+|+.|++++++++.+.+++.+.+.. ..+..+..++++++++++++.+|.+.+++ +|++|+|+++++..++.++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~-~v~~t~g~~~a~~~~~~~l 109 (399)
T 1c7n_A 31 NEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGPTEEYKKTVKKWMKDRHQWDIQTD-WIINTAGVVPAVFNAVREF 109 (399)
T ss_dssp TTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEESSHHHHHHHHHHHH
T ss_pred CCceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHHHHHHhCCCCChh-hEEEcCCHHHHHHHHHHHh
Confidence 57999999999988899999999888753 12223478999999999999889766666 8999999999999999999
Q ss_pred ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCC-CcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHH
Q 043334 693 ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEV-GFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIEN 771 (903)
Q Consensus 693 ~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~-~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~e 771 (903)
+++||+|+++.|+|..+...++..|++++.+|++.++ +|.+|++++++.++....++|++++|+ ||||.+++.+++++
T Consensus 110 ~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~-nptG~~~~~~~l~~ 188 (399)
T 1c7n_A 110 TKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPH-NPVGRVWKKDELQK 188 (399)
T ss_dssp CCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSB-TTTTBCCCHHHHHH
T ss_pred cCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCC-CCCCcCcCHHHHHH
Confidence 9999999999999999999999999999999986333 588999999999973333588899997 99999999999999
Q ss_pred HHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhcc-CCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 772 ILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYS-STNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 772 I~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~-~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
|+++|+++|++||+||+|.++.|++... .+ +..+.. . .+++++++||||.+|++|+|+||++++++++++
T Consensus 189 i~~~~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~~~~~---~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 259 (399)
T 1c7n_A 189 IKDIVLKSDLMLWSDEIHFDLIMPGYEH--TV----FQSIDEQL---ADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRE 259 (399)
T ss_dssp HHHHHHHSSCEEEEECTTTTCBCTTCCC--CC----GGGSCHHH---HTTEEEEECSHHHHTCGGGCCEEEECCCHHHHH
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCc--cc----HHHcCccc---cCcEEEEEeChhhccccchheEEEEECCHHHHH
Confidence 9999999999999999999988876532 11 111211 0 037999999999999999999999998655888
Q ss_pred HHHhCCC---CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 851 AFSSFPG---LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~~---~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+..... ..+++.+.|.++..+|. .+ .+++++.++.++++++.+.
T Consensus 260 ~l~~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l~ 307 (399)
T 1c7n_A 260 RFTKSRDATSGMPFTTLGYKACEICYK--EC-----GKWLDGCIKVIDKNQRIVK 307 (399)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHHHHH--HC-----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCCCCHHHHHHHHHHHh--CC-----hHHHHHHHHHHHHHHHHHH
Confidence 8876543 23678999999999984 22 3567777777877777664
No 39
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=3.5e-31 Score=301.99 Aligned_cols=290 Identities=16% Similarity=0.204 Sum_probs=236.7
Q ss_pred HhhhhccCCCCHHHHHHH-HhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNS-AELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYI 661 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~-a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l 661 (903)
++.++.+++++.+..+.. +.. ....+++.|+|+.|.+++++++.+.+++ +.+.. |....|..++++++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~ 92 (409)
T 2gb3_A 16 FSDRVLLTEESPIRKLVPFAEM--AKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYY 92 (409)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHH--HHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHH
T ss_pred HHHHhhcCCccHHHHHHHHHHH--HHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHH
Confidence 667777777776655443 111 1135778999999999988888899999 77643 444567889999999999
Q ss_pred HhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHH
Q 043334 662 KSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTI 741 (903)
Q Consensus 662 ~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~ 741 (903)
.+.+|.+.+++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+|++++++|.+ ++.|++.
T Consensus 93 ~~~~g~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~ 170 (409)
T 2gb3_A 93 KRRQRVDVKPE-NVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESF 170 (409)
T ss_dssp HHTSCCCCCGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGG
T ss_pred HHHhCCCCCHH-HEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHh
Confidence 99889877766 999999999999999999999999999999999999999999999999999976456766 8889888
Q ss_pred hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 742 LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 742 l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
+++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|+.+.+++... + .+ .... +++
T Consensus 171 l~~~~-~~v~~~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~---~---~~---~~~~---~~~ 236 (409)
T 2gb3_A 171 INERT-KGIVLSNPC-NPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFA---S---AL---SIES---DKV 236 (409)
T ss_dssp CCTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC---C---GG---GSCC---TTE
T ss_pred hCcCC-eEEEECCCC-CCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCC---C---cc---ccCC---CCE
Confidence 87655 589999997 999999999999999999999999999999999888876332 1 11 2211 479
Q ss_pred EEEccCchhcccccceeeEEEeCcHHHHHHHHhCCCCC-CCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 822 SLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPGLS-KPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 822 I~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~~~-~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
++++||||.+|++|+|+||++++++++++.+....... +++.+.|.++..+|+ .+ ..+++++++.++++++.
T Consensus 237 i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~ 309 (409)
T 2gb3_A 237 VVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLN--LD-----DSFFDFVRETYRERVET 309 (409)
T ss_dssp EEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHT--CC-----HHHHHHHHHHHHHHHHH
T ss_pred EEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHh--cc-----HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999923888887654322 888999999999994 22 35677777888888777
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 310 l~ 311 (409)
T 2gb3_A 310 VL 311 (409)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 40
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.97 E-value=1.9e-30 Score=297.51 Aligned_cols=274 Identities=16% Similarity=0.264 Sum_probs=221.1
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHH---------------HHHccCCCCCchHHHHHHHHHHHhhcCCC--CCCCCcEEe
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFE---------------SFARQNMSESEIDVTPSIQQYIKSNFGFP--IDINAEFIY 677 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~---------------al~~y~~~~G~~~lr~ala~~l~~~~G~~--~~pe~~I~v 677 (903)
.+.|+|+.++++++++ .+.+++.+ .+..|....|..++++++++++.+.+|.. .+++ +|++
T Consensus 36 ~~~i~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~-~i~~ 113 (428)
T 1iay_A 36 NGVIQMGLAENQLCLD-LIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE-RVVM 113 (428)
T ss_dssp TSBEECSSCCCCSSHH-HHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT-SCEE
T ss_pred CceeeeccccchhhHH-HHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh-hEEE
Confidence 4689999999887654 67766653 13457667789999999999999888865 5555 8999
Q ss_pred cCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH-HHcCCEEEEecCCCCCCcccCHHHHHHHhhc-----CCCcEEE
Q 043334 678 ADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA-RFLKANIVNIPTESEVGFKMTEKTLVTILET-----VKKPWVY 751 (903)
Q Consensus 678 t~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~-~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-----~~~~~vi 751 (903)
|+|+++++..++.+++++||.|+++.|+|..+...+ ...|++++.+|++.+++|.+|++++++++++ ...++|+
T Consensus 114 ~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 193 (428)
T 1iay_A 114 AGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLI 193 (428)
T ss_dssp EEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEE
Confidence 999999999999999999999999999999988755 4789999999997656788999999998864 1235889
Q ss_pred EECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccC-----CCCCCceEEEcc
Q 043334 752 ISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSS-----TNSSFNVSLLGG 826 (903)
Q Consensus 752 l~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~-----~~~~~~vI~l~S 826 (903)
+++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .++ .. +... .+ .++++++.|
T Consensus 194 l~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~--~~~---~~-~~~~~~~~~~~-~d~viv~~s 265 (428)
T 1iay_A 194 LTNPS-NPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQF--VSI---AE-ILDEQEMTYCN-KDLVHIVYS 265 (428)
T ss_dssp EESSC-TTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCC--CCH---HH-HHTSGGGTTSC-TTSEEEEEE
T ss_pred EcCCC-CCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCc--cCH---HH-hccccccccCC-CCcEEEEec
Confidence 99998 999999999999999999999999999999999887865432 121 11 2111 00 158999999
Q ss_pred CchhcccccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 827 LSLKMLTGALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 827 ~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|||.||++|+|+||++++++++++.+.+....++++.++|.++..+|. +. +.++++++++++.++++++.+.
T Consensus 266 ~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~--~~~~~~~~~~~~~~~~~~~~l~ 337 (428)
T 1iay_A 266 LSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLS--DE--KFVDNFLRESAMRLGKRHKHFT 337 (428)
T ss_dssp STTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTT--CH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhc--Ch--HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999996555888888766667789999999999994 22 1134577888888888888764
No 41
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=6.7e-31 Score=301.28 Aligned_cols=287 Identities=16% Similarity=0.157 Sum_probs=232.0
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCC--CcHHHHHHHHHHHHc-------cCCCCCchHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLP--IPSLVKAAIFESFAR-------QNMSESEIDVTPSI 657 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~--~p~~v~~al~~al~~-------y~~~~G~~~lr~al 657 (903)
+++++.+++.+.++.+... ..+++.|||+.|.|+.. +++.+.+++.+.+.. |....|..++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~------~~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~l 94 (425)
T 1vp4_A 21 ISKIGQNMKSSIIREILKF------AADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQI 94 (425)
T ss_dssp CCHHHHTCCCCCHHHHTTT------TTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHH
T ss_pred hhhhhhcCCCcHHHHHHHh------ccCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHH
Confidence 5566667777766665431 23567999999987643 677888888877643 44556889999999
Q ss_pred HHHHHhhcCCC-CCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHH
Q 043334 658 QQYIKSNFGFP-IDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEK 736 (903)
Q Consensus 658 a~~l~~~~G~~-~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~ 736 (903)
++++.+++|.+ .+++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+|+++ ++ +|++
T Consensus 95 a~~l~~~~g~~~~~~~-~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~--~d~~ 170 (425)
T 1vp4_A 95 LKLLERMYGITGLDED-NLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLED-DG--MDLN 170 (425)
T ss_dssp HHHHHHHHCCCSCCGG-GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-TE--ECHH
T ss_pred HHHHHhccCCCCCCcc-cEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCC-CC--CCHH
Confidence 99998877976 5655 999999999999999999999999999999999999999999999999999865 33 8999
Q ss_pred HHHHHhhc--------CCCcEE-EEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 737 TLVTILET--------VKKPWV-YISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 737 ~L~~~l~~--------~~~~~v-il~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
++++.+++ ++ ++| ++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++... .+
T Consensus 171 ~l~~~l~~~~~~~~~~~~-~~v~~~~~~~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~--~~---- 242 (425)
T 1vp4_A 171 VLERKLSEFDKNGKIKQV-KFIYVVSNFH-NPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETV--DP---- 242 (425)
T ss_dssp HHHHHHHHHHHTTCGGGE-EEEEEECSSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCC--CC----
T ss_pred HHHHHHHhhhhcccCCCc-eEEEECCCCC-CCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCC--cC----
Confidence 99998875 33 466 468887 999999999999999999999999999999999988876542 12
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHH
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMN 885 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~ 885 (903)
+..++.. +++++++||||.++ +|+|+||++++++ +++.+..... ..+++.+.|.++..+|+ .+ .+++
T Consensus 243 ~~~~~~~----~~~i~~~s~sK~~~-~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~---~~~~ 311 (425)
T 1vp4_A 243 IFKIGGP----ERVVLLNTFSKVLA-PGLRIGMVAGSKE-FIRKIVQAKQSADLCSPAITHRLAARYLE--RY---DLLE 311 (425)
T ss_dssp HHHHHCT----TTEEEEEESTTTTC-GGGCEEEEECCHH-HHHHHHHHHHHHHSSCCHHHHHHHHHHHH--HS---CHHH
T ss_pred HHHhCCC----CCEEEEeccccccc-cccceEEEeeCHH-HHHHHHHHhhhhcCCCCHHHHHHHHHHHh--cC---CHHH
Confidence 2223322 47999999999999 9999999999976 8888876543 45678999999999995 22 2356
Q ss_pred HHHHHHHHHHHHHHHHh
Q 043334 886 AVAEHIRNLESRSKRLK 902 (903)
Q Consensus 886 ~l~~~r~~y~~Rr~~l~ 902 (903)
+++++++.++++++.+.
T Consensus 312 ~~~~~~~~~~~~~~~l~ 328 (425)
T 1vp4_A 312 QLKPTIELYRRKRTVML 328 (425)
T ss_dssp HTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78888888888887764
No 42
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.97 E-value=5.4e-31 Score=303.93 Aligned_cols=288 Identities=12% Similarity=0.131 Sum_probs=227.7
Q ss_pred hhhhccCCCC-HHHHHHHHhh-hhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---------cCCCCCchHHHHH
Q 043334 588 STEMIGFSRS-AISVLNSAEL-SITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---------QNMSESEIDVTPS 656 (903)
Q Consensus 588 s~~~~~l~~s-~i~~l~~a~~-a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---------y~~~~G~~~lr~a 656 (903)
+.++..+.++ .+..+..... .....++.++|+|+.|++++++++.+.+++.+.+.+ |....|.++++++
T Consensus 40 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ 119 (449)
T 3qgu_A 40 NENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREA 119 (449)
T ss_dssp CHHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHH
T ss_pred hHHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHH
Confidence 4445555553 4444443211 111245788999999999999999999999998872 4445678999999
Q ss_pred HHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCE----------EEEecCC
Q 043334 657 IQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKAN----------IVNIPTE 726 (903)
Q Consensus 657 la~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~----------vv~v~~~ 726 (903)
+++++. +|+..+++ +|++|+|+++++..+ .+++++||.|++++|+|.++...++..|++ ++.++++
T Consensus 120 ia~~~~--~g~~~~~~-~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~ 195 (449)
T 3qgu_A 120 VASTFY--GHAGRAAD-EIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCN 195 (449)
T ss_dssp HHHHHH--TTTTCCGG-GEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECC
T ss_pred HHHHHH--cCCCCCHH-HEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecc
Confidence 999998 78777776 999999999999998 888999999999999999999999999999 9999998
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
.++++..|++.+ +++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.+++... .+
T Consensus 196 ~~~~~~~~~~~~-----~~~-~~v~l~~p~-NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~--~~--- 263 (449)
T 3qgu_A 196 PDNHFFPDLSKA-----KRT-DIIFFCSPN-NPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCP--KT--- 263 (449)
T ss_dssp GGGTTCCCGGGC-----CCC-SEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSC--SS---
T ss_pred cccCCcCChhHc-----CCC-CEEEEeCCC-CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCC--CC---
Confidence 766777775432 344 599999997 999999999999999999999999999999999988876432 11
Q ss_pred hhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH--------HHHhCC--CCCCCcHHHHHHHHHHHhcc
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD--------AFSSFP--GLSKPHSTVRYAIKKLLGLR 876 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~--------~l~~~~--~~~~~s~~~Q~aa~~~L~~~ 876 (903)
+..++.. .+++++++||||.+|++|+|+||++++++ +++ .+.... ...+++.+.|.++..+|.
T Consensus 264 -~~~~~~~---~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~-- 336 (449)
T 3qgu_A 264 -IYEIPGA---DEVAIETCSFSKYAGFTGVRLGWTVVPKA-LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQ-- 336 (449)
T ss_dssp -GGGSTTG---GGTEEEEEECSGGGTCTTCCCEEEECCTT-CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTS--
T ss_pred -HhhccCC---CCcEEEEecchhhcCCccceeEEEecCHH-HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHh--
Confidence 2222221 14799999999999999999999999887 554 343332 256789999999999994
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 877 ERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 877 ~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+. -.++++++++.++++++.+.
T Consensus 337 ~~----~~~~~~~~~~~~~~~~~~l~ 358 (449)
T 3qgu_A 337 PE----GLKEMNAMIKFYKENAQILK 358 (449)
T ss_dssp HH----HHHHHHHHHHHHHHHHHHHH
T ss_pred hc----CHHHHHHHHHHHHHHHHHHH
Confidence 21 13678888888888888775
No 43
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.97 E-value=1.3e-30 Score=297.35 Aligned_cols=270 Identities=12% Similarity=0.207 Sum_probs=219.6
Q ss_pred CCCeEEccCCCC----CCCCcHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHh------hcCCCCCCCCcEEec
Q 043334 614 NSGLIHMDVDQS----FLPIPSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKS------NFGFPIDINAEFIYA 678 (903)
Q Consensus 614 ~~~~IdLs~g~p----~~~~p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~------~~G~~~~pe~~I~vt 678 (903)
+.++|+|+.|.| .+++++.+.+++.+.+.. |....|..++|+++++++.+ .+|.+.+++ +|++|
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~-~v~~~ 110 (416)
T 1bw0_A 32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKD-NVVLC 110 (416)
T ss_dssp CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGG-GEEEE
T ss_pred CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcc-eEEEe
Confidence 367999999987 577889999999888753 44456889999999999983 256666666 99999
Q ss_pred CchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCC
Q 043334 679 DCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTIN 758 (903)
Q Consensus 679 ~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~N 758 (903)
+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.++++.+++|.+|++++++.+++++ +++++++|+ |
T Consensus 111 ~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~v~i~~p~-n 188 (416)
T 1bw0_A 111 SGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKT-KLLIVTNPS-N 188 (416)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTE-EEEEEESSC-T
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCC-eEEEEeCCC-C
Confidence 99999999999999999999999999999999999999999999998765578899999999998665 589999997 9
Q ss_pred CcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCC----CCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc
Q 043334 759 PTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYE----GWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG 834 (903)
Q Consensus 759 PTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~----~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~ 834 (903)
|||.+++.+++++|+++|+++|++||+||+|.++.|++. .. .+ +..+.. .+++++++||||.|+++
T Consensus 189 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~--~~----~~~~~~----~~~~i~~~s~sK~~~~~ 258 (416)
T 1bw0_A 189 PCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATF--TS----VADFET----TVPRVILGGTAKNLVVP 258 (416)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCC--CC----TTSSCC----SCCEEEEEESTTTTSCG
T ss_pred CCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCc--cC----HHHccC----CCcEEEEecchhhCCCC
Confidence 999999999999999999999999999999999888765 22 11 122222 24689999999999999
Q ss_pred cceeeEEEeCcH-----HHHHHHHhCC-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 835 ALKFGFLVLNHP-----QLVDAFSSFP-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 835 GlRiG~lv~~~~-----~li~~l~~~~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|+|+||++++++ .+...+.+.. ...+++.+.|.++..+|+. .. ..+++++++.++++++.+.
T Consensus 259 Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~-----~~~~~~~~~~~~~~~~~l~ 326 (416)
T 1bw0_A 259 GWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLN-TP-----QEHLDQIVAKIEESAMYLY 326 (416)
T ss_dssp GGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHS-SC-----HHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhc-cc-----HHHHHHHHHHHHHHHHHHH
Confidence 999999999763 2443333332 2457889999999999951 11 3566777777777777664
No 44
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.97 E-value=8.5e-31 Score=300.75 Aligned_cols=288 Identities=14% Similarity=0.210 Sum_probs=225.3
Q ss_pred HhhhhccCCCC-HHHHHHHH-hhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---------cCCCCCchHHHH
Q 043334 587 KSTEMIGFSRS-AISVLNSA-ELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---------QNMSESEIDVTP 655 (903)
Q Consensus 587 ~s~~~~~l~~s-~i~~l~~a-~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---------y~~~~G~~~lr~ 655 (903)
+++++..++++ .+..+... ........+.++|+|++|++++++|+.+.+++.+.+.. |.+..|..++++
T Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~ 105 (432)
T 3ei9_A 26 RNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRA 105 (432)
T ss_dssp CCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHH
T ss_pred cChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHH
Confidence 34556667663 66655432 11112345678999999999999999999999998762 334567899999
Q ss_pred HHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCC------------EEEEe
Q 043334 656 SIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKA------------NIVNI 723 (903)
Q Consensus 656 ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~------------~vv~v 723 (903)
++++++.+ |...+++ +|++|+|+++++.. +..++++||.|+++.|+|+++...++..|. +++.+
T Consensus 106 ~ia~~~~~--~~~~~~~-~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 181 (432)
T 3ei9_A 106 AIAKTFYG--GLGIGDD-DVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYM 181 (432)
T ss_dssp HHHHHHHT--TTTCCGG-GEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEE
T ss_pred HHHHHHHc--cCCCCcc-eEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEe
Confidence 99999985 4444455 99999999999997 577889999999999999999999988884 68889
Q ss_pred cCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCc
Q 043334 724 PTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWD 803 (903)
Q Consensus 724 ~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s 803 (903)
+++.++++..|++. .+++ +++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.+++... +
T Consensus 182 ~~~~~~~~~~~l~~-----~~~~-~~v~l~~p~-NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~---~ 251 (432)
T 3ei9_A 182 RCTPENGFFPDLST-----VGRT-DIIFFCSPN-NPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR---S 251 (432)
T ss_dssp ECCGGGTTSCCGGG-----CCCC-SEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCS---S
T ss_pred ccCcccCCcCChhh-----CCCC-CEEEEeCCC-CCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCC---C
Confidence 98866667666443 2344 589999997 999999999999999999999999999999999888876542 1
Q ss_pred hhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH--------HHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 804 LEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL--------VDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 804 ~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l--------i~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
+..+... .+++|+++||||+||++|+|+||++++++ + ++.+.+... ..+++.+.|.++..++
T Consensus 252 ----~~~~~~~---~~~~i~~~S~SK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 323 (432)
T 3ei9_A 252 ----IFEIPGA---EEVAMETASFSNYAGFTGVRLGWTVIPKK-LLYSDGFPVAKDFNRIICTCFNGASNISQAGALACL 323 (432)
T ss_dssp ----GGGSTTG---GGTEEEEEESHHHHCTTTTCCEEEECCTT-CBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHS
T ss_pred ----hhhcCCC---CCeEEEEecchhccCCcccceEEEEEChH-HhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHH
Confidence 1122222 14799999999999999999999999987 5 677765532 6678899999999998
Q ss_pred hcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 874 GLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 874 ~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
. ..+ .+++.++++.++++++.+.
T Consensus 324 ~-~~~-----~~~~~~~~~~~~~~~~~l~ 346 (432)
T 3ei9_A 324 T-PEG-----LEAMHKVIGFYKENTNIII 346 (432)
T ss_dssp S-HHH-----HHHHHHHHHHHHHHHHHHH
T ss_pred h-ccc-----HHHHHHHHHHHHHHHHHHH
Confidence 3 112 3578888888888888765
No 45
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.97 E-value=6.5e-31 Score=304.10 Aligned_cols=297 Identities=12% Similarity=0.070 Sum_probs=223.8
Q ss_pred hhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC-CCCC----cHHHHHHHHHHHH-------ccCCCCCchHHHHH
Q 043334 589 TEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQS-FLPI----PSLVKAAIFESFA-------RQNMSESEIDVTPS 656 (903)
Q Consensus 589 ~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p-~~~~----p~~v~~al~~al~-------~y~~~~G~~~lr~a 656 (903)
.++...+++.+..+..... ....+..|+|++|.+ ++.. .+.+.+++.+... .|.+..|.+++|++
T Consensus 26 ~~~~~~~~~~i~~~~~~~~---~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ 102 (448)
T 3meb_A 26 SGFPASPPDAILNLTVLYN---ADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEA 102 (448)
T ss_dssp TTCCCCCCCTTHHHHHHHH---HCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHH
T ss_pred hcCCCCCCChHHHHHHHHH---hCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHH
Confidence 4555566666666664322 145566899999998 6543 3455555444331 25556789999999
Q ss_pred HHHHHHhhcCCCC---CCCCcEEe--cCchHHHHHH--HHHHhccCCCeEEEcCCCcHHHHHHHH----HcCCEEEEecC
Q 043334 657 IQQYIKSNFGFPI---DINAEFIY--ADCSQSLFNK--LVLCCILEGGTLCFPAGSNGNYVSAAR----FLKANIVNIPT 725 (903)
Q Consensus 657 la~~l~~~~G~~~---~pe~~I~v--t~Gs~~al~~--ll~~l~~pGD~Vlv~~P~y~~~~~~~~----~~G~~vv~v~~ 725 (903)
+++++ +|.+. +++ +|++ |+|+++++.. .+.+++.+||+|++++|+|++|...++ ..|++++.+|+
T Consensus 103 ia~~l---~g~~~~~~~~~-~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~ 178 (448)
T 3meb_A 103 AQFLM---FGKDSKAAQEG-RIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTY 178 (448)
T ss_dssp HHHHH---HCTTCHHHHTT-CEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECC
T ss_pred HHHHh---cCCCccccCcC-cEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEec
Confidence 99998 36552 234 8999 9999999987 556778899999999999999999999 99999999999
Q ss_pred CCCC-CcccCHHHHHHHhhc--CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCC
Q 043334 726 ESEV-GFKMTEKTLVTILET--VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGW 802 (903)
Q Consensus 726 ~~~~-~f~ld~~~L~~~l~~--~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~ 802 (903)
.+++ +|.+|++.+++.+++ ....++++++|+ ||||.+++.+++++|+++|+++|+++|+||+|.++.+++...+.+
T Consensus 179 ~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~-NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~ 257 (448)
T 3meb_A 179 LRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAH-NPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAF 257 (448)
T ss_dssp BCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTH
T ss_pred cccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCC-CCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCch
Confidence 4444 688999999999985 223477889997 999999999999999999999999999999999888875211111
Q ss_pred chhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE--Ee--------CcH----HHHHHHHhCC--CCCCCcHHHH
Q 043334 803 DLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL--VL--------NHP----QLVDAFSSFP--GLSKPHSTVR 866 (903)
Q Consensus 803 s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l--v~--------~~~----~li~~l~~~~--~~~~~s~~~Q 866 (903)
+ +..+.... .++++++||||.||++|+|+||+ ++ +++ .+++.+.... ..++++.+.|
T Consensus 258 ~----~~~~~~~~---~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 330 (448)
T 3meb_A 258 A----VRMFVDAG---VEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGA 330 (448)
T ss_dssp H----HHHHHHTT---CCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHH
T ss_pred h----HHHHhhcC---CcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHH
Confidence 1 22221221 47999999999999999999998 77 553 3777666543 3677889999
Q ss_pred HHHHHHHhcccc-cchhHHHHHHHHHHHHHHHHHHHh
Q 043334 867 YAIKKLLGLRER-KARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 867 ~aa~~~L~~~~~-~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.++..+|. ++ ..+.+.++++++++.|+++|+.+.
T Consensus 331 ~a~~~~l~--~~~l~~~~~~~~~~~~~~~~~~r~~l~ 365 (448)
T 3meb_A 331 YIVQVIVH--DKRLLQMFYDNVKEMSARIHRMRSLLH 365 (448)
T ss_dssp HHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc--ChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999994 22 112334568888999999998875
No 46
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.97 E-value=5.6e-30 Score=285.17 Aligned_cols=263 Identities=11% Similarity=0.126 Sum_probs=217.8
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
..++++|+|+.|++++++++.+.+++.+.+... ..++ ......+++.+++++|++.+ +|++|+|+++++..++.+
T Consensus 13 ~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~y~-~~~~~~l~~~la~~~~~~~~---~i~~~~g~~~a~~~~~~~ 87 (354)
T 3ly1_A 13 PSTDNPIRINFNENPLGMSPKAQAAARDAVVKA-NRYA-KNEILMLGNKLAAHHQVEAP---SILLTAGSSEGIRAAIEA 87 (354)
T ss_dssp CCSSSCEECSSCCCSSCCCHHHHHHHHHTGGGT-TSCC-HHHHHHHHHHHHHHTTSCGG---GEEEESHHHHHHHHHHHH
T ss_pred CCCCceEEccCCCCCCCCCHHHHHHHHHHHhhC-cCCC-CCchHHHHHHHHHHhCCChH---HEEEeCChHHHHHHHHHH
Confidence 467789999999999999999999998877542 1121 12334555666666676543 899999999999999999
Q ss_pred hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh--cCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 692 CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE--TVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~--~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
++++||+|+++.|+|..+...++..|++++.++++. ++.+|++++++.++ +++ ++|++++|+ ||||.+++.+++
T Consensus 88 l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~-~~v~l~~p~-nptG~~~~~~~l 163 (354)
T 3ly1_A 88 YASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGP-SIVYLVNPN-NPTGTITPADVI 163 (354)
T ss_dssp HCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSC-EEEEEESSC-TTTCCCCCHHHH
T ss_pred HhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCC-CEEEEeCCC-CCcCCCcCHHHH
Confidence 999999999999999999999999999999999974 47799999999998 555 589999997 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
.+|++.| ++|+++|+||+|.++.+++...+ .+..++... +++++++||||.+|++|+|+||++++++ ++
T Consensus 164 ~~l~~~~-~~~~~li~De~~~~~~~~~~~~~------~~~~~~~~~---~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~ 232 (354)
T 3ly1_A 164 EPWIASK-PANTMFIVDEAYAEFVNDPRFRS------ISPMITQGA---ENIILLKTFSKIHAMAGMRVGYAVAHPT-VI 232 (354)
T ss_dssp HHHHHTC-CTTEEEEEECTTGGGCCCTTCCC------SHHHHHTTC---SSEEEEEESSSTTCCGGGCCEEEECCHH-HH
T ss_pred HHHHHhC-CCCeEEEEeccHHHhccccccCC------HHHHhhhcC---CCEEEEeeChhhccChhhhheeeecCHH-HH
Confidence 9999999 89999999999998887765431 222223321 4799999999999999999999999877 99
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+.......+++.+.|.++..+|. +. +++.+.++.++++++.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~a~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 277 (354)
T 3ly1_A 233 ALMGRYVAGEKINFSGVDAALASMN--DS------AFITYSKKSNDVSRQILL 277 (354)
T ss_dssp HHHGGGTTCSCCCHHHHHHHHHHTT--CH------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHhc--CH------HHHHHHHHHHHHHHHHHH
Confidence 9999888778899999999999994 22 567777778888777764
No 47
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.97 E-value=1.5e-30 Score=296.58 Aligned_cols=299 Identities=11% Similarity=0.051 Sum_probs=229.4
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC-CC----CCcHHHHHHHHH-HHH-----ccCCCCCchHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQS-FL----PIPSLVKAAIFE-SFA-----RQNMSESEIDVTPS 656 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p-~~----~~p~~v~~al~~-al~-----~y~~~~G~~~lr~a 656 (903)
++++..++++.+..+..... ...++++|+|+.|.+ ++ ++++.+.+++.+ .+. .|.+..|.+++|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 81 (412)
T 1yaa_A 5 FNNIELLPPDALFGIKQRYG---QDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSN 81 (412)
T ss_dssp TTTCCCCCCCTTHHHHHHHH---TCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred hccCcccCCCcHHHHHHHHh---cCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHH
Confidence 35566677777776665322 135678999999986 33 467889999888 653 25556789999999
Q ss_pred HHHHHHhhcCCCCCCCCcEEe--cCchHHHHHHH--HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcc
Q 043334 657 IQQYIKSNFGFPIDINAEFIY--ADCSQSLFNKL--VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFK 732 (903)
Q Consensus 657 la~~l~~~~G~~~~pe~~I~v--t~Gs~~al~~l--l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ 732 (903)
+++++.+.+|.+.+++ +|++ |+|+++++..+ +..++.+||+|++++|+|+.+...++..|++++.+++.+++++.
T Consensus 82 ia~~~~~~~~~~~~~~-~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 160 (412)
T 1yaa_A 82 AAKIIFGTQSDALQED-RVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160 (412)
T ss_dssp HHHHHHCTTCHHHHTT-CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred HHHHHhcCCCCCCCcc-eEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCc
Confidence 9999987677655666 8999 99999999987 34456799999999999999999999999999999983224678
Q ss_pred cCHHHHHHHhhcC--CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCC---CCCCCCchhhh
Q 043334 733 MTEKTLVTILETV--KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNY---EGWGGWDLEGC 807 (903)
Q Consensus 733 ld~~~L~~~l~~~--~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~---~~~s~~s~~~~ 807 (903)
+|++++++.+++. .+.++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.|++ .. .+
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~~~~~p~-nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~---~~---- 232 (412)
T 1yaa_A 161 LDLNGFLNAIQKAPEGSIFVLHSCAH-NPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDA---YA---- 232 (412)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEECSSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHT---HH----
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchh---HH----
Confidence 9999999998764 22244449997 999999999999999999999999999999999888865 22 11
Q ss_pred hhhhccCCCCCC--ceEEEccCchhcccccceeeEEE--e----CcHH----HHHHHHhCC-C-CCCCcHHHHHHHHHHH
Q 043334 808 LSKLYSSTNSSF--NVSLLGGLSLKMLTGALKFGFLV--L----NHPQ----LVDAFSSFP-G-LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 808 ~~~l~~~~~~~~--~vI~l~S~SK~~g~~GlRiG~lv--~----~~~~----li~~l~~~~-~-~~~~s~~~Q~aa~~~L 873 (903)
+..+.... .+ ++++++||||.+|++|+|+||++ + .+++ +++.+.... . ..+++.+.|.++..+|
T Consensus 233 ~~~~~~~~--~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l 310 (412)
T 1yaa_A 233 VRLGVEKL--STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLL 310 (412)
T ss_dssp HHHHHHHT--TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred HHHHHhcC--CCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHh
Confidence 21222111 12 79999999999998899999998 7 2444 777776632 2 5567899999999999
Q ss_pred hcccc-cchhHHHHHHHHHHHHHHHHHHHh
Q 043334 874 GLRER-KARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 874 ~~~~~-~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+ +. ..+.++++++++++.++++++.+.
T Consensus 311 ~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 338 (412)
T 1yaa_A 311 E--TPELTEQWHKDMVTMSSRITKMRHALR 338 (412)
T ss_dssp H--SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 22 011134688889999999988875
No 48
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.97 E-value=2.5e-30 Score=294.60 Aligned_cols=298 Identities=11% Similarity=0.043 Sum_probs=231.1
Q ss_pred hhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC-C----CCCcHHHHHHHHHHH--H----ccCCCCCchHHHHH
Q 043334 588 STEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQS-F----LPIPSLVKAAIFESF--A----RQNMSESEIDVTPS 656 (903)
Q Consensus 588 s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p-~----~~~p~~v~~al~~al--~----~y~~~~G~~~lr~a 656 (903)
.+++..++++.++.+..... +..++++|+|+.|.+ + .++++.+.+++.+.+ . .|.+..|..++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 82 (412)
T 1ajs_A 6 FAEVPQAQPVLVFKLIADFR---EDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTC 82 (412)
T ss_dssp TTTCCCCCCCHHHHHHHHHH---TCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred hhhCcccCCchHHHHHHHHh---hcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHH
Confidence 44677788888888775432 135678999999985 2 246688999988876 1 24456788999999
Q ss_pred HHHHHHhhcCCCCCCCCcEEe--cCchHHHHHHHHH--HhccCC-----CeEEEcCCCcHHHHHHHHHcCCE-EEEecCC
Q 043334 657 IQQYIKSNFGFPIDINAEFIY--ADCSQSLFNKLVL--CCILEG-----GTLCFPAGSNGNYVSAARFLKAN-IVNIPTE 726 (903)
Q Consensus 657 la~~l~~~~G~~~~pe~~I~v--t~Gs~~al~~ll~--~l~~pG-----D~Vlv~~P~y~~~~~~~~~~G~~-vv~v~~~ 726 (903)
+++++...+|...+++ +|++ |+|+++++..++. .++++| |+|+++.|+|..|...++..|++ ++.++++
T Consensus 83 la~~~~~~~~~~~~~~-~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 161 (412)
T 1ajs_A 83 ASRLALGDDSPALQEK-RVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYW 161 (412)
T ss_dssp HHHHHHCTTCHHHHTT-CEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECE
T ss_pred HHHHHhcCCCCccCCC-cEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeee
Confidence 9999977667655555 8999 9999999999853 556899 99999999999999999999999 9999986
Q ss_pred CCCCcccCHHHHHHHhhcC--CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCC---CCCCC
Q 043334 727 SEVGFKMTEKTLVTILETV--KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNY---EGWGG 801 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~--~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~---~~~s~ 801 (903)
.+++|.+|++++++.+++. ...++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.+++ ..
T Consensus 162 ~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~--- 237 (412)
T 1ajs_A 162 DTEKRGLDLQGFLSDLENAPEFSIFVLHACAH-NPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDA--- 237 (412)
T ss_dssp ETTTTEECHHHHHHHHHHSCTTCEEEEESSSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHT---
T ss_pred cCCCCccCHHHHHHHHHhCCCCcEEEEECCCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccc---
Confidence 4467889999999998752 22366689997 999999999999999999999999999999999888865 22
Q ss_pred CchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe---CcH---HHHHHHHhCC-C-CCCCcHHHHHHHHHHH
Q 043334 802 WDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL---NHP---QLVDAFSSFP-G-LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 802 ~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~---~~~---~li~~l~~~~-~-~~~~s~~~Q~aa~~~L 873 (903)
+ .+..+...+ +++|+++||||.+|++|+|+||+++ +++ .+++.+.+.. . ..+++.+.|.++..+|
T Consensus 238 ~----~~~~~~~~~---~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 310 (412)
T 1ajs_A 238 W----AIRYFVSEG---FELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTL 310 (412)
T ss_dssp H----HHHHHHHTT---CCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHH
T ss_pred h----HHHHHhccC---CcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHH
Confidence 1 122222222 5899999999999999999999999 553 1455555422 2 4456889999999999
Q ss_pred hccccc-chhHHHHHHHHHHHHHHHHHHHh
Q 043334 874 GLRERK-ARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 874 ~~~~~~-~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+ +.. ...++++++++++.++++++.+.
T Consensus 311 ~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 338 (412)
T 1ajs_A 311 S--DPELFHEWTGNVKTMADRILSMRSELR 338 (412)
T ss_dssp H--SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c--CcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 220 01134678888889988888775
No 49
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.97 E-value=1.1e-30 Score=299.28 Aligned_cols=300 Identities=9% Similarity=-0.005 Sum_probs=214.2
Q ss_pred HhhhhccC---CCCHHHHHHHHhhhhccCCCCCeEEccCCC---CC--CCCcHHHHHHHHHHHHc-----cCCCCCchHH
Q 043334 587 KSTEMIGF---SRSAISVLNSAELSITETPNSGLIHMDVDQ---SF--LPIPSLVKAAIFESFAR-----QNMSESEIDV 653 (903)
Q Consensus 587 ~s~~~~~l---~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~---p~--~~~p~~v~~al~~al~~-----y~~~~G~~~l 653 (903)
.+++..++ ++.++..+.++.++ . +.+.|||++|. ++ .+..+.|+++....++. |.+..|.+++
T Consensus 17 ~~~~~~~v~~~p~d~i~~l~~~~~~---d-~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~l 92 (420)
T 4h51_A 17 TAERWQKIQAQAPDVIFDLAKRAAA---A-KGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPF 92 (420)
T ss_dssp HHHHHHTCCCCCCCHHHHHHHHHHH---C-CSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHH
T ss_pred hhHHHhCCCCCCCChHHHHHHHHhc---C-CCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHH
Confidence 34444444 45567766654331 3 33489999993 22 23457888887766542 7778999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH----HHhccCCCeEEEcCCCcHHHHHHHHHcCCEE-EEecCCCC
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV----LCCILEGGTLCFPAGSNGNYVSAARFLKANI-VNIPTESE 728 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll----~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~v-v~v~~~~~ 728 (903)
|+++++++.... .+.... ..+.|.|+++++...+ ..+++|||+|++++|+|++|..+++..|++. ..++..+.
T Consensus 93 r~aia~~~~g~~-~~~~~~-~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~ 170 (420)
T 4h51_A 93 IDEAVKIIYGNT-VELENL-VAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDP 170 (420)
T ss_dssp HHHHHHHHHC----CGGGE-EEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEG
T ss_pred HHHHHHHhcCCC-cccccc-ceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccc
Confidence 999999885422 222211 2344777777765544 4456799999999999999999999999974 45555555
Q ss_pred CCcccCHHHHHHHhhcCC--CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 729 VGFKMTEKTLVTILETVK--KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~--~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
+++.+|.+.+.+.+...+ ..++++++|| ||||.+++.+++++|+++|+++++++|+||+|.++.|++...+.+.
T Consensus 171 ~~~~~d~~~~~~~l~~~~~~~~vll~~~p~-NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~--- 246 (420)
T 4h51_A 171 KTVSLNFEGMKKDILAAPDGSVFILHQCAH-NPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYA--- 246 (420)
T ss_dssp GGTEECHHHHHHHHHHSCSSCEEEEESSSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHH---
T ss_pred cccCCCHHHHHHHHhccCCCcEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHH---
Confidence 677889998888775432 2356666776 9999999999999999999999999999999999998764321111
Q ss_pred hhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH-------HHhC--CCCCCCcHHHHHHHHHHHhccc
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA-------FSSF--PGLSKPHSTVRYAIKKLLGLRE 877 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~-------l~~~--~~~~~~s~~~Q~aa~~~L~~~~ 877 (903)
.....+. .+++++++||||+|+++|||+||++++.+ ..+. +..+ ...++++...|.++...|.. .
T Consensus 247 -~~~~~~~---~~~~i~~~s~SK~~~~~G~RvG~~~~~~~-~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d-~ 320 (420)
T 4h51_A 247 -ARLFARR---GIEVLLAQSFSKNMGLYSERAGTLSLLLK-DKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSN-N 320 (420)
T ss_dssp -HHHHHHT---TCCCEEEEECTTTSCCGGGCEEEEEEECS-CHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS-H
T ss_pred -HHhHHhh---CceEEEEeccccccccccCceEEEEeccc-CHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcC-H
Confidence 1111122 25899999999999999999999998754 3332 2222 23788899999999999952 2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 878 RKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 878 ~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.....++++++.+++.|++||+.++
T Consensus 321 ~l~~~~~~~~~~m~~r~~~~R~~l~ 345 (420)
T 4h51_A 321 ELRKEWEAELSAMAERIRTMRRTVY 345 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2234466788899999999999885
No 50
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=5.4e-30 Score=289.62 Aligned_cols=268 Identities=15% Similarity=0.171 Sum_probs=217.9
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHcc--CCCCCchH-HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQ--NMSESEID-VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y--~~~~G~~~-lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
+++|+|+.|++++++++.+.+++.+.+... .+..+..+ +++++++++.+.+|.+.+++ +|++|+|+++++..++.+
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~lr~~la~~l~~~~g~~~~~~-~v~~t~g~~~al~~~~~~ 106 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQ-TVVYGPSVIYMVSELIRQ 106 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGG-GEEEESCHHHHHHHHHHH
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCHH-HEEEcCCHHHHHHHHHHH
Confidence 478999999999889999999999887541 22223678 99999999999889776666 999999999999999999
Q ss_pred hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCC-CcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 692 CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEV-GFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~-~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++++||+|+++.|+|..+...++..|++++.+|++.++ +|.+|++++++.+++...++|++++|+ ||||.+++.++++
T Consensus 107 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~-nptG~~~~~~~l~ 185 (390)
T 1d2f_A 107 WSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQ-NPTGKVWTCDELE 185 (390)
T ss_dssp SSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSC-TTTCCCCCTTHHH
T ss_pred hcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCC-CCCCcCcCHHHHH
Confidence 99999999999999999999999999999999997543 578999999999976333588889997 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
+|+++|+++|++||+||+|.++.+++... .+ +..+... ...+ ++||||.+|++|+|+||++++++++++
T Consensus 186 ~l~~~~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~~~~----~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~ 254 (390)
T 1d2f_A 186 IMADLCERHGVRVISDEIHMDMVWGEQPH--IP----WSNVARG----DWAL-LTSGSKSFNIPALTGAYGIIENSSSRD 254 (390)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBCSSSCC--CC----GGGTCCS----SEEE-EECSHHHHTCGGGCCEEEEECSHHHHH
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCC--cC----HHHcchh----hHhh-ccCccHhhcccChhheEEEECCHHHHH
Confidence 99999999999999999999988876542 11 1222210 0123 999999999999999999997544888
Q ss_pred HHHhCC---C-CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 851 AFSSFP---G-LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~---~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+.... . ..+++.+.|.++..+|. .. .+++++.++.++++++.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l~ 303 (390)
T 1d2f_A 255 AYLSALKGRDGLSSPSVLALTAHIAAYQ--QG-----APWLDALRIYLKDNLTYIA 303 (390)
T ss_dssp HHHHHHHTTSCCCSCCHHHHHHHHHHHH--HC-----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcccCCCCHHHHHHHHHHHh--cC-----HHHHHHHHHHHHHHHHHHH
Confidence 776543 2 34788999999998884 22 3567778888888877764
No 51
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.97 E-value=4.8e-30 Score=291.49 Aligned_cols=292 Identities=13% Similarity=0.122 Sum_probs=230.9
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCC--CcHHHHHHHHHHHHc------cCCCCCchHHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLP--IPSLVKAAIFESFAR------QNMSESEIDVTPSIQ 658 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~--~p~~v~~al~~al~~------y~~~~G~~~lr~ala 658 (903)
+++++..+.++.++.+...... ....|.+.|||+.|.++.. +++.+.+++.+.+.. |....|..+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~~~~~l~~~la 85 (407)
T 2zc0_A 7 LAGRANWIKGSALADVMKKASE-LQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELREELA 85 (407)
T ss_dssp SCGGGGGCCCCHHHHHHHHHHH-HHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGSCCCTTCCHHHHHHHH
T ss_pred hhhhhccCCchHHHHHHHhhhc-ccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhccccccCCCCCCCHHHHHHHH
Confidence 4566677777777766642210 0124558999999987654 677888888887754 445567899999999
Q ss_pred HHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHH
Q 043334 659 QYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTL 738 (903)
Q Consensus 659 ~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L 738 (903)
+++.+.+|.+.+++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+|+++ ++ +|++++
T Consensus 86 ~~~~~~~g~~~~~~-~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~--~d~~~l 161 (407)
T 2zc0_A 86 AFLKKYDHLEVSPE-NIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDN-DG--MRVDLL 161 (407)
T ss_dssp HHHHHHSCCCCCGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEET-TE--ECHHHH
T ss_pred HHHHHhcCCCCCcc-eEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCC-CC--CCHHHH
Confidence 99998889766666 999999999999999999999999999999999999999999999999999865 33 899999
Q ss_pred HHHhh----c--CCCcEE-EEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhh
Q 043334 739 VTILE----T--VKKPWV-YISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL 811 (903)
Q Consensus 739 ~~~l~----~--~~~~~v-il~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l 811 (903)
++.++ + ++ ++| ++++|+ ||||.+++.+++++|+++|+++|++||+||+|..+.+++... .+ +..+
T Consensus 162 ~~~l~~~~~~~~~~-~~v~~~~~~~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~----~~~~ 233 (407)
T 2zc0_A 162 EEKIKELKAKGQKV-KLIYTIPTGQ-NPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDI--VP----LKAL 233 (407)
T ss_dssp HHHHHHHHHTTCCE-EEEEECCSSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSC--CC----GGGG
T ss_pred HHHHHhhhcccCCc-eEEEECCCCC-CCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCC--CC----hhhc
Confidence 99987 5 33 455 467776 999999999999999999999999999999999988876532 11 2223
Q ss_pred ccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHH-HHHH
Q 043334 812 YSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLM-NAVA 888 (903)
Q Consensus 812 ~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~-~~l~ 888 (903)
+. .+++++++||||.++ +|+|+||++++++ +++.+..... ..+++++.|.++..+|+ .. .++ ++++
T Consensus 234 ~~----~~~~i~~~s~sK~~~-~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~---~~~~~~~~ 302 (407)
T 2zc0_A 234 DN----EGRVIVAGTLSKVLG-TGFRIGWIIAEGE-ILKKVLMQKQPIDFCAPAISQYIALEYLK--RG---YFEKYHLE 302 (407)
T ss_dssp CS----SCCEEEEEESTTTTC-TTSCCEEEECCHH-HHHHHHHHHTTTTSSSCHHHHHHHHHHHH--TT---HHHHHTTT
T ss_pred CC----CCCEEEEcccccccC-CCcceEEEecCHH-HHHHHHHHHHhhcCCCCHHHHHHHHHHHH--cC---CchHHHHH
Confidence 22 147999999999999 9999999999876 9888886543 45678999999999994 22 234 5566
Q ss_pred HHHHHHHHHHHHHh
Q 043334 889 EHIRNLESRSKRLK 902 (903)
Q Consensus 889 ~~r~~y~~Rr~~l~ 902 (903)
++++.++++++.+.
T Consensus 303 ~~~~~~~~~~~~l~ 316 (407)
T 2zc0_A 303 GALLGYKEKRDIML 316 (407)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67777777776653
No 52
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.97 E-value=1.9e-30 Score=293.46 Aligned_cols=295 Identities=10% Similarity=0.024 Sum_probs=215.2
Q ss_pred hccCCCCHHHHHHHHhhhhccCCCCCeEEccCCC---CCC--CCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHHH
Q 043334 591 MIGFSRSAISVLNSAELSITETPNSGLIHMDVDQ---SFL--PIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQY 660 (903)
Q Consensus 591 ~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~---p~~--~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~~ 660 (903)
+..++++.+..+..... ...+++.|||+.|. ++. ++++.+.+++.+.+. .|.+..|..++|++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 81 (396)
T 2q7w_A 5 ITAAPADPILGLADLFR---ADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQEL 81 (396)
T ss_dssp CCCCCC--------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHh---ccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHH
Confidence 44555666655553211 12456799999998 332 467889999887764 255567889999999999
Q ss_pred HHhhcCCCCCCCCcEEe--cCchHHHHHHHHHHh--ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHH
Q 043334 661 IKSNFGFPIDINAEFIY--ADCSQSLFNKLVLCC--ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEK 736 (903)
Q Consensus 661 l~~~~G~~~~pe~~I~v--t~Gs~~al~~ll~~l--~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~ 736 (903)
+.+..+.+.+++ +|++ |+|+++++..++..+ +.+||+|+++.|+|..|...++..|++++.+|++.+++|.+|++
T Consensus 82 ~~~~~~~~~~~~-~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 160 (396)
T 2q7w_A 82 LFGKGSALINDK-RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHCTTCHHHHTT-CEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HhcCCCCccccc-cEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHH
Confidence 976544333445 8988 999999999988766 46999999999999999999999999999999864456889999
Q ss_pred HHHHHhhcC--CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCC--CCCCCCchhhhhhhhc
Q 043334 737 TLVTILETV--KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNY--EGWGGWDLEGCLSKLY 812 (903)
Q Consensus 737 ~L~~~l~~~--~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~--~~~s~~s~~~~~~~l~ 812 (903)
++++.+++. ...++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.+++ .. .+ +..+.
T Consensus 161 ~l~~~l~~~~~~~~~v~~~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~---~~----~~~~~ 232 (396)
T 2q7w_A 161 ALINSLNEAQAGDVVLFHGCCH-NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDA---EG----LRAFA 232 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHT---HH----HHHHH
T ss_pred HHHHHHHhCCCCCEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchh---HH----HHHHH
Confidence 999998753 23467789997 999999999999999999999999999999999888764 22 11 22222
Q ss_pred cCCCCCCceEEEccCchhcccccceeeEEEe--CcH----HHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccc-cchhH
Q 043334 813 SSTNSSFNVSLLGGLSLKMLTGALKFGFLVL--NHP----QLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRER-KARDL 883 (903)
Q Consensus 813 ~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~--~~~----~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~-~~~~~ 883 (903)
..+ +++++++||||.+|++|+|+||+++ +++ .+++.+.... ...+++.+.|.++..+|+ +. ..+.+
T Consensus 233 ~~~---~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~l~~~~ 307 (396)
T 2q7w_A 233 AMH---KELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILS--NDALRAIW 307 (396)
T ss_dssp HHC---SCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHT--SHHHHHHH
T ss_pred hcC---CcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhc--ChhhHHHH
Confidence 221 4799999999999999999999997 332 3666655432 245568999999999994 21 01124
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 043334 884 MNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 884 ~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++++++++.++++++.+.
T Consensus 308 ~~~~~~~~~~~~~~~~~l~ 326 (396)
T 2q7w_A 308 EQELTDMRQRIQRMRQLFV 326 (396)
T ss_dssp HHHHHHC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5678888888888888775
No 53
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.97 E-value=6.8e-30 Score=292.56 Aligned_cols=271 Identities=14% Similarity=0.131 Sum_probs=227.5
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHc--cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFAR--QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~--y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
+.+.|+|++|++++++++.+.+++.+.+.. +.+.....++++++++++++.+|.+.+++ +|++|+|+++++..++.+
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~-~v~~~~g~~ea~~~a~~~ 138 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKE-DILFIDGVVPAISIALQA 138 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEESCHHHHHHHHHHH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEcCCHHHHHHHHHHH
Confidence 678999999999999999999999998865 23333458899999999999999777666 999999999999999999
Q ss_pred hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCC-CCCCcccCHHHHHHHhh-cCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 692 CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTE-SEVGFKMTEKTLVTILE-TVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~-~~~~f~ld~~~L~~~l~-~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
++++||+|+++.|+|.++...++..|.+++.+|++ .+++|.+|+++|+++++ +++ ++|++++|+ ||||.+++.+++
T Consensus 139 ~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~-~~vil~~p~-nptG~~~~~~~l 216 (421)
T 3l8a_A 139 FSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNV-KIYLLCSPH-NPGGRVWDNDDL 216 (421)
T ss_dssp HSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTE-EEEEEESSB-TTTTBCCCHHHH
T ss_pred hcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCC-eEEEECCCC-CCCCCcCCHHHH
Confidence 99999999999999999999999999999999987 45668899999999998 455 589999997 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
++|.++|+++|++||+||+|.++.+++... .+ +..+.... .++++++.|+||.+|++|+|+||+++++++++
T Consensus 217 ~~l~~l~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~~~~~--~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~ 288 (421)
T 3l8a_A 217 IKIAELCKKHGVILVSDEIHQDLALFGNTH--HS----LNTLDASY--KDFTIILSSATKTFNIAGTKNSFAIIQNESLR 288 (421)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCC--CC----GGGSCTTG--GGTEEEEECSHHHHTCGGGCCEEEECCSHHHH
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCC--cc----HHHcCchh--cCcEEEEEeChhhccCchhheEeEEcCCHHHH
Confidence 999999999999999999999999887643 11 12221100 14799999999999999999999999955588
Q ss_pred HHHHhCC---CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFP---GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~---~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+.... ...+++.+.|.++.+++. .. +++++++++.++++++.+.
T Consensus 289 ~~~~~~~~~~~~~~~n~~~~~a~~aal~--~~-----~~~~~~~~~~~~~~~~~l~ 337 (421)
T 3l8a_A 289 RKFQYRQLANNQHEVPTVGMIATQAAFQ--YG-----KPWLEELKTVIEGNIKLVI 337 (421)
T ss_dssp HHHHHHHHHTTCSCCCHHHHHHHHHHHH--HC-----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCHHHHHHHHHHHh--cc-----HHHHHHHHHHHHHHHHHHH
Confidence 8887654 255788999999999994 22 3567777777777777664
No 54
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.97 E-value=1.1e-29 Score=284.10 Aligned_cols=258 Identities=12% Similarity=0.106 Sum_probs=212.5
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHcc--CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQ--NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y--~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
..+++|+|+.|+|++++++.+.+++.+.+... .+..+..++++++++++ |++. + +|++|+|+++++..++.
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~----~~~~--~-~v~~~~g~t~a~~~~~~ 102 (363)
T 3ffh_A 30 GLTKITKLSSNENPLGTSKKVAAIQANSSVETEIYPDGWASSLRKEVADFY----QLEE--E-ELIFTAGVDELIELLTR 102 (363)
T ss_dssp TCSCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC----CHHHHHHHHHHH----TCCG--G-GEEEESSHHHHHHHHHH
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHh----CCCh--h-hEEEeCCHHHHHHHHHH
Confidence 45689999999999999999999988765431 23345666666666655 5543 3 89999999999999999
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
+++++||+|+++.|+|..+...++..|++++.+|+++ ++.+|++++++.+++++ ++|++++|+ ||||.+++.+++.
T Consensus 103 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~-~~v~~~~p~-nptG~~~~~~~l~ 178 (363)
T 3ffh_A 103 VLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKT-TIVWICNPN-NPTGNYIELADIQ 178 (363)
T ss_dssp HHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTE-EEEEEESSC-TTTCCCCCHHHHH
T ss_pred HHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCC-CEEEEeCCC-CCcCCCcCHHHHH
Confidence 9999999999999999999999999999999999975 57799999999998766 599999997 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
+|++.|++ |+++|+||+|+++.+ +...+ ....... .+++++++||||.+|++|+|+||++++++ +++
T Consensus 179 ~l~~~~~~-~~~li~De~~~~~~~-~~~~~------~~~~~~~----~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~ 245 (363)
T 3ffh_A 179 AFLDRVPS-DVLVVLDEAYIEYVT-PQPEK------HEKLVRT----YKNLIITRTFSKIYGLASARVGYGIADKE-IIR 245 (363)
T ss_dssp HHHTTSCT-TSEEEEECTTGGGCS-SCCCC------CGGGGGT----CTTEEEEEESSSTTCCSSCCCEEEEECHH-HHH
T ss_pred HHHHhCCC-CcEEEEeCchHhhcC-ccccC------HHHHhhc----CCCEEEEeechhhhcCchhceeeeecCHH-HHH
Confidence 99998888 999999999988777 43321 1222222 25899999999999999999999999776 999
Q ss_pred HHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 851 AFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+.......+++.+.|.++..+|. +. +++++.++.++++++.+.
T Consensus 246 ~l~~~~~~~~~~~~~~~~~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 289 (363)
T 3ffh_A 246 QLNIVRPPFNTTSIGQKLAIEAIK--DQ------AFIGECRTSNANGIKQYE 289 (363)
T ss_dssp HHHHTCCSCCCBHHHHHHHHHHHH--CH------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCHHHHHHHHHHhc--CH------HHHHHHHHHHHHHHHHHH
Confidence 999888888899999999999994 22 566777777777777664
No 55
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.97 E-value=7.6e-30 Score=285.61 Aligned_cols=259 Identities=14% Similarity=0.122 Sum_probs=213.9
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
..+++|+|+.|++++++++.+++++.+.+.. |....+ .++++++++++ |++. + +|++|+|+++++..++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~-~~lr~~la~~~----~~~~--~-~v~~~~g~~~a~~~~~ 99 (365)
T 3get_A 28 GVKEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSM-IELKSTLAQKY----KVQN--E-NIIIGAGSDQVIEFAI 99 (365)
T ss_dssp TCSCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHH----TCCG--G-GEEEESSHHHHHHHHH
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCh-HHHHHHHHHHh----CCCc--c-eEEECCCHHHHHHHHH
Confidence 3478999999999999999999999988754 322333 66677766654 6543 3 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.+++++||+|+++.|+|..+...++..|++++.+++ .++++ +|++++++++++++ ++|++++|+ ||||.+++.+++
T Consensus 100 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~-~~v~~~~p~-nptG~~~~~~~l 175 (365)
T 3get_A 100 HSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEI-KLIFLCLPN-NPLGECLDASEA 175 (365)
T ss_dssp HHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTE-EEEEEESSC-TTTCCCCCHHHH
T ss_pred HHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCC-CEEEEcCCC-CCCCCCcCHHHH
Confidence 999999999999999999999999999999999998 33568 99999999998666 589999998 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCcc--CCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEF--NYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQ 847 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f--~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~ 847 (903)
.+|+++| ++|++||+||+|+++.| .+... .+ ........ +++++++||||.+|++|+|+||++++++
T Consensus 176 ~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~--~~---~~~~~~~~----~~~i~~~s~sK~~~~~G~r~G~~~~~~~- 244 (365)
T 3get_A 176 TEFIKGV-NEDCLVVIDAAYNEFASFKDSKKH--LE---PCELIKEF----DNVLYLGTFSKLYGLGGLRIGYGIANAN- 244 (365)
T ss_dssp HHHHHTS-CTTSEEEEECTTHHHHHHHCGGGC--CC---HHHHHHHC----TTEEEEEESSSTTSCTTTCCEEEEECHH-
T ss_pred HHHHHhC-CCCcEEEEeCccHHHhcccCCccc--cc---HhHHhccC----CCEEEEeecchHhcCcchheEEEEcCHH-
Confidence 9999998 57999999999987775 43221 11 22222222 4899999999999999999999999776
Q ss_pred HHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 848 LVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 848 li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.+......++++.+.|.++..+|. +. +++++.++.++++++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 291 (365)
T 3get_A 245 IISAFYKLRAPFNVSNLALKAAVAAMD--DD------EFTEKTLENNFSQMELYK 291 (365)
T ss_dssp HHHHHHHHSCTTCSCHHHHHHHHHHHT--CH------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcCHHHHHHHHHHhC--CH------HHHHHHHHHHHHHHHHHH
Confidence 999999887777899999999999994 22 567778888888877764
No 56
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.97 E-value=6.9e-30 Score=293.59 Aligned_cols=277 Identities=18% Similarity=0.257 Sum_probs=224.1
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHH----------------HccCCCCCchHHHHHHHHHHHhhcC--CCCCCCCc
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESF----------------ARQNMSESEIDVTPSIQQYIKSNFG--FPIDINAE 674 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al----------------~~y~~~~G~~~lr~ala~~l~~~~G--~~~~pe~~ 674 (903)
++..+|+|+.+++.+. .+.+.+++.+.. ..|....|.+++++++++++.+.+| ++.+++ +
T Consensus 36 ~p~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~-~ 113 (435)
T 3piu_A 36 NTNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN-H 113 (435)
T ss_dssp BTTSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG-G
T ss_pred CCCCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH-H
Confidence 3456899999998876 556666665532 2466678899999999999986555 445555 9
Q ss_pred EEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHH-HcCCEEEEecCCCCCCcccCHHHHHHHhhc------CCC
Q 043334 675 FIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAAR-FLKANIVNIPTESEVGFKMTEKTLVTILET------VKK 747 (903)
Q Consensus 675 I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~-~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~------~~~ 747 (903)
|++|+|+++++..++.+++++||.|+++.|+|..+...+. ..|++++.++++.+++|.+|++++++++++ ++
T Consensus 114 v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~- 192 (435)
T 3piu_A 114 LVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRV- 192 (435)
T ss_dssp EEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCE-
T ss_pred EEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCe-
Confidence 9999999999999999999999999999999999998887 789999999998777899999999999876 34
Q ss_pred cEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhh--c---cCCCCCCceE
Q 043334 748 PWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL--Y---SSTNSSFNVS 822 (903)
Q Consensus 748 ~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l--~---~~~~~~~~vI 822 (903)
++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|..+.|++... .+........ + ..+ ++++
T Consensus 193 ~~v~i~~p~-nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~---~~~i 266 (435)
T 3piu_A 193 KGVLVTNPS-NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF--ISVMEVLKDRNCDENSEVW---QRVH 266 (435)
T ss_dssp EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCC--CCHHHHHHC-------CGG---GGEE
T ss_pred EEEEEcCCC-CCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC--cCHHHhccccccccccCCC---CCEE
Confidence 589999997 999999999999999999999999999999999888877543 2221111100 0 001 4899
Q ss_pred EEccCchhcccccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 823 LLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 823 ~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++||||.+|++|+|+||++++++.+++.+.+.......+++.|.++..+|. .. +.+++++.+.++.++++++.+.
T Consensus 267 ~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~--~~~~~~~~~~~~~~~~~~~~l~ 342 (435)
T 3piu_A 267 VVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLS--DK--KLTKNYIAENHKRLKQRQKKLV 342 (435)
T ss_dssp EEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHH--CH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhc--Ch--HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997665888887766666788999999999994 22 2235677888888888888764
No 57
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.97 E-value=2e-30 Score=297.41 Aligned_cols=271 Identities=17% Similarity=0.191 Sum_probs=220.3
Q ss_pred CCCeEEccCCCC-CCCCcHHH--HHHHHHHHH-----ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCc---EEecCchH
Q 043334 614 NSGLIHMDVDQS-FLPIPSLV--KAAIFESFA-----RQNMSESEIDVTPSIQQYIKSNFGFPIDINAE---FIYADCSQ 682 (903)
Q Consensus 614 ~~~~IdLs~g~p-~~~~p~~v--~~al~~al~-----~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~---I~vt~Gs~ 682 (903)
.+++|||+.|+| +++.++.+ .+++.+.+. .|....|..++++++++++.+.+ ...+++ + |++|+|++
T Consensus 46 ~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~-~~~~i~~t~g~~ 123 (430)
T 2x5f_A 46 KSTTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSID-NMSRPIVTNALT 123 (430)
T ss_dssp TTCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGG-GBCCCEEESHHH
T ss_pred CCCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCC-ccceEEEcCCch
Confidence 357899999999 88766655 666554432 35555689999999999998764 555666 7 99999999
Q ss_pred HHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHH-cCCEEEEecCCCCCCcccCHHHHHHHhhc---CCCcEEEEECCCCC
Q 043334 683 SLFNKLVLCCILEGGTLCFPAGSNGNYVSAARF-LKANIVNIPTESEVGFKMTEKTLVTILET---VKKPWVYISGPTIN 758 (903)
Q Consensus 683 ~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~-~G~~vv~v~~~~~~~f~ld~~~L~~~l~~---~~~~~vil~~P~~N 758 (903)
+++..++.+++++||+|+++.|+|+.+...++. .|++++.++++.++ |.+|++++++.+++ ++ +++++++|+ |
T Consensus 124 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~-~~v~i~~p~-n 200 (430)
T 2x5f_A 124 HGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDK-VIMILNYPN-N 200 (430)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSE-EEEEECSSC-T
T ss_pred HHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCC-EEEEEcCCC-C
Confidence 999999999999999999999999999999999 99999999987543 77999999999876 44 588999997 9
Q ss_pred CcccCCCHHHHHHHHHHHHh-----CCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc---eEEEccCchh
Q 043334 759 PTGLLYSNKEIENILTVCAK-----YGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN---VSLLGGLSLK 830 (903)
Q Consensus 759 PTG~v~s~eel~eI~~ia~k-----~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~---vI~l~S~SK~ 830 (903)
|||.+++.+++++|+++|++ +|++||+||+|.++.|++... .+ ....++... ++ +++++||||.
T Consensus 201 ptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~--~~---~~~~~~~~~---~~~~~~i~~~s~sK~ 272 (430)
T 2x5f_A 201 PTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYT--QS---LFTALTNLH---SNAILPIRLDGATKE 272 (430)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCC--SC---HHHHHHTTC---CTTEEEEEEEEHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccc--hH---HHHHHhhcc---CCcceEEEEEecccC
Confidence 99999999999999999999 999999999999988876532 11 121232221 47 9999999999
Q ss_pred cccccceeeEEEe---CcHHHHHHHHhCC------CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 831 MLTGALKFGFLVL---NHPQLVDAFSSFP------GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 831 ~g~~GlRiG~lv~---~~~~li~~l~~~~------~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
||++|+|+||+++ +++ +++.+.... ...+++.+.|.++..+|+. ++ .+.++++++++.++++++.+
T Consensus 273 ~~~~G~riG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~---~~~~~~~~~~~~~~~~~~~l 347 (430)
T 2x5f_A 273 FFAWGFRVGFMTFGTSDQT-TKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKN-NK---QFDKEIEQNIQTLKERYEVT 347 (430)
T ss_dssp TTCGGGCCEEEEEBCCCHH-HHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS-CH---HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEEecCCHH-HHHHHHHHHhhhhhcccCCCChHHHHHHHHHHcc-Ch---HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 766 888887643 3567899999999999930 22 23455666888999888877
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 348 ~ 348 (430)
T 2x5f_A 348 K 348 (430)
T ss_dssp H
T ss_pred H
Confidence 5
No 58
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.97 E-value=1.1e-29 Score=286.30 Aligned_cols=282 Identities=12% Similarity=0.159 Sum_probs=224.6
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHh
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKS 663 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~ 663 (903)
+++++..++.+.++.+..... .++.|+|+.|.|++++++.+.+++.+.+.. |....|..+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~--- 73 (381)
T 1v2d_A 3 LHPRTEAAKESIFPRMSGLAQ------RLGAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEE--- 73 (381)
T ss_dssp CCGGGGGC---CHHHHHHHHH------HHTCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHH---
T ss_pred hhhhhhhcCccHHHHHHHHHh------cCCeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHh---
Confidence 355666777777777665332 146899999999998999999999888754 44445777888888776
Q ss_pred hcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCC--CCCCcccCHHHHHHH
Q 043334 664 NFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTE--SEVGFKMTEKTLVTI 741 (903)
Q Consensus 664 ~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~--~~~~f~ld~~~L~~~ 741 (903)
+|.+ ++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++++ + ++|.+|++++++.
T Consensus 74 -~~~~--~~-~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~ 148 (381)
T 1v2d_A 74 -FAVE--PE-SVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP-EGFRLDLSALEKA 148 (381)
T ss_dssp -HTSC--GG-GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEET-TEEECCHHHHHTT
T ss_pred -cCCC--hh-hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCC-ccCCcCHHHHHHh
Confidence 4554 34 79999999999999999999999999999999999999999999999999986 3 2477999999999
Q ss_pred hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCce
Q 043334 742 LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNV 821 (903)
Q Consensus 742 l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~v 821 (903)
+++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.| +... .+ .. .+ .. +++
T Consensus 149 l~~~~-~~v~~~~~~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~--~~---~~-~~-~~----~~~ 214 (381)
T 1v2d_A 149 LTPRT-RALLLNTPM-NPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERP--RR---LR-EF-AP----ERT 214 (381)
T ss_dssp CCTTE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCC--CC---HH-HH-CT----TTE
T ss_pred cCcCC-EEEEECCCC-CCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCC--CC---HH-Hh-cC----CCE
Confidence 87655 589999998 9999999999999999999999999999999998888 4321 11 12 12 11 489
Q ss_pred EEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 822 SLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 822 I~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
++++|+||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|.. . .+.++++++++.++++++
T Consensus 215 ~~~~s~sK~~~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~---~~~~~~~~~~~~~~~~~~ 288 (381)
T 1v2d_A 215 FTVGSAGKRLEATGYRVGWIVGPKE-FMPRLAGMRQWTSFSAPTPLQAGVAEALKL--A---RREGFYEALREGYRRRRD 288 (381)
T ss_dssp EEEEEHHHHTTCGGGCCEEEECCTT-THHHHHHHHHHHTSSCCHHHHHHHHHHHHH--H---HHTTHHHHHHHHHHHHHH
T ss_pred EEEeechhhcCCcccceEEEEeCHH-HHHHHHHHHhhcccCCCcHHHHHHHHHHhC--c---ccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887 8888876543 667889999999999941 1 113567777778888777
Q ss_pred HHh
Q 043334 900 RLK 902 (903)
Q Consensus 900 ~l~ 902 (903)
.+.
T Consensus 289 ~l~ 291 (381)
T 1v2d_A 289 LLA 291 (381)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 59
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.97 E-value=3.5e-30 Score=295.26 Aligned_cols=266 Identities=12% Similarity=0.111 Sum_probs=208.2
Q ss_pred CeEEccCCCCC---CCCcHHHHHHHHHHH--------HccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 616 GLIHMDVDQSF---LPIPSLVKAAIFESF--------ARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 616 ~~IdLs~g~p~---~~~p~~v~~al~~al--------~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.+|+|+.|+|+ +++++.+++++.+.+ ..|....|.+++|+++++++ |++ ++ +|++|+|++++
T Consensus 33 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~----~~~--~~-~i~~t~G~~~a 105 (422)
T 3d6k_A 33 LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL----GLP--AD-LVVAQDGSSLN 105 (422)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH----TCC--GG-GEEECSSCHHH
T ss_pred CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh----CCC--hh-HEEEecchHHH
Confidence 48999999998 777777777665431 24666778999999999887 444 44 89999999998
Q ss_pred H--HHHHHHhccC------------CCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEE
Q 043334 685 F--NKLVLCCILE------------GGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWV 750 (903)
Q Consensus 685 l--~~ll~~l~~p------------GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~v 750 (903)
+ ..++.+++.+ ||+|++++|+|+.|...++..|++++.+|+++ ++ +|++++++.+++.+.++|
T Consensus 106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~g--~d~~~l~~~l~~~~~~~v 182 (422)
T 3d6k_A 106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTD-EG--PDMGVVRELVKDPQVKGM 182 (422)
T ss_dssp HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEET-TE--ECHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCC-CC--CCHHHHHHHHhcCCCeEE
Confidence 7 6777777766 34799999999999999999999999999975 33 899999999875333466
Q ss_pred E-EECCCCCCcccCCCHHHHHHHHHHHH-hCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc
Q 043334 751 Y-ISGPTINPTGLLYSNKEIENILTVCA-KYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS 828 (903)
Q Consensus 751 i-l~~P~~NPTG~v~s~eel~eI~~ia~-k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S 828 (903)
+ +++|+ ||||.+++.+++++|+++|+ ++|++||+||+|..+.|.....+..++.+.....+. .+++++++|||
T Consensus 183 ~~~~~~~-NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~S~S 257 (422)
T 3d6k_A 183 WTVPVFG-NPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGN----PNRFWFMSSTS 257 (422)
T ss_dssp EECCSSC-TTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTC----TTCEEEEEEST
T ss_pred EEcCCCC-CCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCC----CCcEEEEcChh
Confidence 6 57776 99999999999999999999 999999999999864443321111222111111122 25899999999
Q ss_pred hhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 829 LKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 829 K~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|+ ++||+|+||++++++ +++.+..... ..+++.+.|.++..+|+ +. ..+.++++++++.|++|++.+.
T Consensus 258 K~-~~~GlriG~~~~~~~-l~~~l~~~~~~~~~~~~~~~q~a~~~~l~--~~--~~~~~~~~~~~~~~~~~~~~l~ 327 (422)
T 3d6k_A 258 KI-THAGSGVSFFASSKE-NIEWYASHANVRGIGPNKLNQLAHAQFFG--DV--AGLKAHMLKHAASLAPKFERVL 327 (422)
T ss_dssp TT-SCTTSSCEEEECCHH-HHHHHHHHHHHHCSCCCHHHHHHHHHHHC--SH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hh-cCcccceEEEEeCHH-HHHHHHHHHHhhcCCCCHHHHHHHHHHHh--Cc--chHHHHHHHHHHHHHHHHHHHH
Confidence 98 789999999999977 9998887654 57789999999999994 31 2456889999999999988764
No 60
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.97 E-value=6.8e-29 Score=280.80 Aligned_cols=294 Identities=15% Similarity=0.071 Sum_probs=221.9
Q ss_pred hhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCC---C--CCCcHHHHHHHHHHHH-----ccCCCCCchHHHHHHHH
Q 043334 590 EMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQS---F--LPIPSLVKAAIFESFA-----RQNMSESEIDVTPSIQQ 659 (903)
Q Consensus 590 ~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p---~--~~~p~~v~~al~~al~-----~y~~~~G~~~lr~ala~ 659 (903)
++..++++.+..+..... ...+++.|||+.|.+ + .++++.+.+++.+.+. .|....|.+++|+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~---~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (394)
T 2ay1_A 4 NLKPQAPDKILALMGEFR---ADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE 80 (394)
T ss_dssp GCCCCCCCSHHHHHHHHH---HCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred cCccCCCccHHHHHHHHH---hCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHH
Confidence 345566777776664322 135678999999984 2 2567889999888764 25456788999999999
Q ss_pred HHHhhcCCCCCCCCcEEe--cCchHHHHHHHHHHhcc--CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCH
Q 043334 660 YIKSNFGFPIDINAEFIY--ADCSQSLFNKLVLCCIL--EGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTE 735 (903)
Q Consensus 660 ~l~~~~G~~~~pe~~I~v--t~Gs~~al~~ll~~l~~--pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~ 735 (903)
++... ++ +++ +|++ |+|+++++..++..+.. +||+|+++.|+|..+...++..|++++.++++.+++|.+|+
T Consensus 81 ~~~~~-~~--~~~-~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 156 (394)
T 2ay1_A 81 LILGD-GL--KSE-TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDF 156 (394)
T ss_dssp HHHGG-GC--CGG-GEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECH
T ss_pred HHhCC-CC--Ccc-cEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCH
Confidence 98542 33 344 8998 99999999999887765 99999999999999999999999999999986545688999
Q ss_pred HHHHHHhhcC--CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCC-CCCCCchhhhhhhhc
Q 043334 736 KTLVTILETV--KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYE-GWGGWDLEGCLSKLY 812 (903)
Q Consensus 736 ~~L~~~l~~~--~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~-~~s~~s~~~~~~~l~ 812 (903)
+++++.+++. ...++++++|+ ||||.+++.+++++|+++|+++|++||+||+|.++.+++. .. . .+..+.
T Consensus 157 ~~l~~~l~~~~~~~~~~~~~~~~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~----~~~~~~ 229 (394)
T 2ay1_A 157 EGMKADLAAAKKGDMVLLHGCCH-NPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDA--A----GTRLIA 229 (394)
T ss_dssp HHHHHHHHTCCTTCEEEEESSSC-TTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHH--H----HHHHHH
T ss_pred HHHHHHHHhCCCCCEEEEeCCCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccch--H----HHHHHh
Confidence 9999998754 22356678997 9999999999999999999999999999999988877531 10 1 122122
Q ss_pred cCCCCCCceEEEccCchhcccccceeeEEEe--CcHHHH----HHHHhC--CCCCCCcHHHHHHHHHHHhcccc-cchhH
Q 043334 813 SSTNSSFNVSLLGGLSLKMLTGALKFGFLVL--NHPQLV----DAFSSF--PGLSKPHSTVRYAIKKLLGLRER-KARDL 883 (903)
Q Consensus 813 ~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~--~~~~li----~~l~~~--~~~~~~s~~~Q~aa~~~L~~~~~-~~~~~ 883 (903)
... +++++++||||.+|++|+|+||+++ ++++++ +.+... ....+++.+.|.++..+|+ +. ..+.+
T Consensus 230 ~~~---~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~l~~~~ 304 (394)
T 2ay1_A 230 SRI---PEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLT--TPELRADW 304 (394)
T ss_dssp HHC---SSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHH--SHHHHHHH
T ss_pred hcC---CCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhc--ChHHHHHH
Confidence 211 4799999999999999999999998 433243 333322 2245568899999999994 21 01124
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 043334 884 MNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 884 ~~~l~~~r~~y~~Rr~~l~ 902 (903)
.++++++++.++++++.+.
T Consensus 305 ~~~~~~~~~~~~~~~~~l~ 323 (394)
T 2ay1_A 305 MAELEAVRSGMLRLREQLA 323 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5678888889988888774
No 61
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.97 E-value=1.7e-29 Score=287.16 Aligned_cols=260 Identities=18% Similarity=0.192 Sum_probs=201.4
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---------cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---------QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ 682 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---------y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~ 682 (903)
..++++|+|+.|++++++++.+.+++.+.+.. |.+..|.+++|+++++++. +|. .+++ +|++|+|++
T Consensus 30 ~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~-~v~~~~G~~ 105 (400)
T 3asa_A 30 NPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAK-EIFISDGAK 105 (400)
T ss_dssp CTTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGG-GEEEESCHH
T ss_pred cCCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHH-HEEEccChH
Confidence 45778999999999988899999998887653 3344578888998888764 564 4445 899999999
Q ss_pred HHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCE-EEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcc
Q 043334 683 SLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKAN-IVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTG 761 (903)
Q Consensus 683 ~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~-vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG 761 (903)
+++..++ .++++||+|+++.|+|+.+...++..|++ ++.+|+++++++..|++. + +++ ++|++++|+ ||||
T Consensus 106 ~al~~~~-~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~----~-~~~-~~v~l~~p~-nptG 177 (400)
T 3asa_A 106 VDLFRLL-SFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE----D-THI-DILCLCSPN-NPTG 177 (400)
T ss_dssp HHHHHHH-HHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT----T-CCC-SEEEEESSC-TTTC
T ss_pred HHHHHHH-HHcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh----c-cCc-cEEEEeCCC-CCCC
Confidence 9999865 55689999999999999999999999999 999999765566665432 1 344 589999997 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL 841 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l 841 (903)
.+++.+++++|+++|+++|++||+||+|.++.+++... .+ +..++..+ +++++++||||.||++|+|+||+
T Consensus 178 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~--~~----~~~~~~~~---~~~i~~~s~sK~~g~~GlriG~~ 248 (400)
T 3asa_A 178 TVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLP--KS----IFEIPDAR---FCAIEINSFSKPLGFAGIRLGWT 248 (400)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSC--SS----GGGSTTGG---GTEEEEEECCGGGTTTTCCCEEE
T ss_pred CcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCC--Cc----hhhCCCCC---CceEEEecchhhcCCcchheeEE
Confidence 99999999999999999999999999998877765421 11 22222211 47999999999999999999999
Q ss_pred EeCcHHH-------HHHHHhC-CC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 842 VLNHPQL-------VDAFSSF-PG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 842 v~~~~~l-------i~~l~~~-~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++++ + ++.+... .. ..+++.+.|.++..+|+ ++ +++++++.++++++.+.
T Consensus 249 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~-------~~~~~~~~~~~~~~~l~ 309 (400)
T 3asa_A 249 VIPQE-LTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLS--IL-------PQLEAIHYYRENSDLLR 309 (400)
T ss_dssp ECCTT-CBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHH--HT-------TTCHHHHHHHHHHHHHH
T ss_pred eeChh-hccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhC--cH-------HHHHHHHHHHHHHHHHH
Confidence 99887 6 5555432 11 34689999999999994 21 34455566666665553
No 62
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.97 E-value=5.3e-29 Score=282.40 Aligned_cols=283 Identities=17% Similarity=0.149 Sum_probs=223.4
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCC--CcHHHHHHHHHHHHc-------cCCCCCchHHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLP--IPSLVKAAIFESFAR-------QNMSESEIDVTPSI 657 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~--~p~~v~~al~~al~~-------y~~~~G~~~lr~al 657 (903)
+|+++..+..+.++.+.... .++++|+|+.|.++.. +++.+.+++.+.+.+ |....|..++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~l 83 (397)
T 2zyj_A 10 FGKGAGRIQASTIRELLKLT------QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFV 83 (397)
T ss_dssp SCGGGGGCCCCHHHHHHHHH------TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHH
T ss_pred hhhhhcccCchHHHHHHhhc------cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHH
Confidence 56677777777776665432 2457899999987643 677888888776642 44455788899998
Q ss_pred HHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHH
Q 043334 658 QQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKT 737 (903)
Q Consensus 658 a~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~ 737 (903)
++++ |++ ++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+|+++ ++ +|+++
T Consensus 84 a~~~----g~~--~~-~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~--~d~~~ 153 (397)
T 2zyj_A 84 AEWI----GVR--PE-EVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE-EG--PDLDA 153 (397)
T ss_dssp HHHH----TSC--GG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEET-TE--ECHHH
T ss_pred HHHh----CCC--hh-hEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCC-CC--CCHHH
Confidence 8887 543 34 899999999999999999999999999999999999999999999999999865 33 89999
Q ss_pred HHHHhhc-CCCcEE-EEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCC
Q 043334 738 LVTILET-VKKPWV-YISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSST 815 (903)
Q Consensus 738 L~~~l~~-~~~~~v-il~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~ 815 (903)
+++.+++ ++ ++| ++++|+ ||||.+++.+++++|+++|+++|++||+||+|..+.|++... .++ ..++...
T Consensus 154 l~~~l~~~~~-~~v~~~~~~~-nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~--~~~----~~~~~~~ 225 (397)
T 2zyj_A 154 LEEVLKRERP-RFLYLIPSFQ-NPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARL--PSL----FELAREA 225 (397)
T ss_dssp HHHHHHHCCC-SCEEECCBSC-TTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCC--CCH----HHHHHHH
T ss_pred HHHHHhhcCC-eEEEECCCCc-CCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCC--Cch----hhhCccc
Confidence 9999986 45 465 568887 999999999999999999999999999999999988876532 122 2222110
Q ss_pred CCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHH
Q 043334 816 NSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRN 893 (903)
Q Consensus 816 ~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~ 893 (903)
..+++++++|+||.++ +|+|+||++++++ +++.+..... ..+.+.+.|.++..+|+ .+ .+ ++++++++.
T Consensus 226 -~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~--~~---~~-~~~~~~~~~ 296 (397)
T 2zyj_A 226 -GYPGVIYLGSFSKVLS-PGLRVAFAVAHPE-ALQKLVQAKQGADLHTPMLNQMLVHELLK--EG---FS-ERLERVRRV 296 (397)
T ss_dssp -TCCCEEEEEESTTTTC-GGGCCEEEECCHH-HHHHHHHHHHHHHSSCCHHHHHHHHHHHT--TT---HH-HHHHHHHHH
T ss_pred -CCCeEEEEeccccccc-ccceeEEEecCHH-HHHHHHHHHHhhcCCCCHHHHHHHHHHHH--hC---CH-HHHHHHHHH
Confidence 0037899999999999 9999999999976 8888876543 45668999999999994 32 23 677888888
Q ss_pred HHHHHHHHh
Q 043334 894 LESRSKRLK 902 (903)
Q Consensus 894 y~~Rr~~l~ 902 (903)
++++++.+.
T Consensus 297 ~~~~~~~l~ 305 (397)
T 2zyj_A 297 YREKAQAML 305 (397)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887764
No 63
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.97 E-value=8e-29 Score=277.48 Aligned_cols=256 Identities=16% Similarity=0.270 Sum_probs=212.8
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc--c--CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR--Q--NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~--y--~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
.++++|+|+.|++++++|+.+.+++.+.+.. . ....|..+++++++++ +|.+ +++ +|++|+|+++++..+
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~l~~~la~~----~g~~-~~~-~i~~~~g~t~a~~~~ 101 (367)
T 3euc_A 28 DSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEV----MQVP-AGM-EVLLGNGSDEIISML 101 (367)
T ss_dssp CCTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCCCHHHHHHHHHHH----HTCC-TTC-EEEEEEHHHHHHHHH
T ss_pred CCCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCcHHHHHHHHHHH----hCCC-Ccc-eEEEcCCHHHHHHHH
Confidence 3467999999999999999999999888763 1 1223556666666655 4663 334 899999999999999
Q ss_pred HHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHH
Q 043334 689 VLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNK 767 (903)
Q Consensus 689 l~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~e 767 (903)
+.+++++||+|+++.|+|..+...++..|++++.+|++. +|.+|++++++++++ ++ ++|++++|+ ||||.+++.+
T Consensus 102 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~-~~v~~~~~~-nptG~~~~~~ 177 (367)
T 3euc_A 102 ALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQP-AIVYLAYPN-NPTGNLFDAA 177 (367)
T ss_dssp HHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCC-SEEEEESSC-TTTCCCCCHH
T ss_pred HHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCC-CEEEEcCCC-CCCCCCCCHH
Confidence 999999999999999999999999999999999999975 677999999999987 66 599999997 9999999999
Q ss_pred HHHHHHHHHHhC--CcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCc
Q 043334 768 EIENILTVCAKY--GARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNH 845 (903)
Q Consensus 768 el~eI~~ia~k~--~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~ 845 (903)
++++|+++|+++ |+++|+||+|.++.+.+. ...+... +++++++||||. +++|+|+||+++++
T Consensus 178 ~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~----------~~~~~~~----~~~i~~~s~sK~-~~~G~r~G~~~~~~ 242 (367)
T 3euc_A 178 DMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW----------MSRLTDF----GNLLVMRTVSKL-GLAGIRLGYVAGDP 242 (367)
T ss_dssp HHHHHHHHTBTTSCBCEEEEECTTCCSSSCCS----------GGGGGTC----TTEEEEEECCCT-TSCSCCEEEEEECH
T ss_pred HHHHHHHhhhhcCCCcEEEEeCcchhhcccch----------HHHHhhC----CCEEEEecchhh-cccccCceeeeeCH
Confidence 999999999999 999999999987653221 1112222 489999999999 99999999999987
Q ss_pred HHHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 846 PQLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 846 ~~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+ +++.+......++++.+.|.++..+|+ . .+++++.++.++++++.+.
T Consensus 243 ~-~~~~~~~~~~~~~~~~~~~~a~~~~l~--~------~~~~~~~~~~~~~~~~~l~ 290 (367)
T 3euc_A 243 Q-WLEQLDKVRPPYNVNVLTEATALFALE--H------VAVLDEQAAQLRAERSRVA 290 (367)
T ss_dssp H-HHHHHGGGCCSSCCCHHHHHHHHHHHT--T------HHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHhCCCCCCCHHHHHHHHHHhc--C------HHHHHHHHHHHHHHHHHHH
Confidence 7 999999888777899999999999994 2 2566777777777777654
No 64
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.97 E-value=1.2e-29 Score=300.69 Aligned_cols=261 Identities=10% Similarity=0.130 Sum_probs=204.6
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHH--ccCCCCCchHHHHHHHHHH-HhhcCCC--C-CCCCcEEecCchHHHHHHHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFA--RQNMSESEIDVTPSIQQYI-KSNFGFP--I-DINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~--~y~~~~G~~~lr~ala~~l-~~~~G~~--~-~pe~~I~vt~Gs~~al~~ll~ 690 (903)
+|+|++|.+.++ ++.+.+++.+.+. .|....|.+++++++++++ .++++.. . +++ +|++|+|+++++..++.
T Consensus 106 ~i~l~~g~~~~~-~~~~~~al~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~-~I~~t~G~~eal~~~~~ 183 (546)
T 2zy4_A 106 SLSYVRDQLGLD-PAAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESV-NLFAVEGGTAAMAYIFE 183 (546)
T ss_dssp HHHHHHHTSCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGE-EEEEEEHHHHHHHHHHH
T ss_pred hhecccCCCCCC-ChHHHHHHHHhhhcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcc-eEEEECCHHHHHHHHHH
Confidence 789999999875 4556666666653 3666778899998876654 5555432 2 334 99999999999999988
Q ss_pred H-----hccCCCeEEEcCCCcHHHHHHHHHc--CCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 691 C-----CILEGGTLCFPAGSNGNYVSAARFL--KANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 691 ~-----l~~pGD~Vlv~~P~y~~~~~~~~~~--G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
+ +++|||.|++++|+|+.|...+... |++++.++++++++|.+|++++++.+++++ +++++++|+ ||||.+
T Consensus 184 ~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-k~v~l~~p~-NPtG~~ 261 (546)
T 2zy4_A 184 SLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAI-KIFFCVNPS-NPPSVK 261 (546)
T ss_dssp HHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTE-EEEEEESSC-SSSCBC
T ss_pred HhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCC-eEEEEECCC-CCCCcc
Confidence 7 5789999999999999999987654 699999999877789999999998876555 589999998 999999
Q ss_pred CCHHHHHHHHHHH--HhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE
Q 043334 764 YSNKEIENILTVC--AKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL 841 (903)
Q Consensus 764 ~s~eel~eI~~ia--~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l 841 (903)
++.+++++|+++| +++|++||+||+|+++.++ .. + ... ... +++|+++||||++|+||+|+||+
T Consensus 262 ~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~--~~---s---~~~-~~~-----~~~i~~~S~SK~~g~~GlRiG~~ 327 (546)
T 2zy4_A 262 MDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD--FQ---S---LFA-ICP-----ENTLLVYSFSKYFGATGWRLGVV 327 (546)
T ss_dssp CCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT--CC---C---HHH-HCG-----GGEEEEEESTTTTTCGGGCEEEE
T ss_pred CCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc--Cc---C---HHH-hCC-----CCEEEEEeCccccCCCCcceEEE
Confidence 9999999999999 7899999999999877653 21 1 222 211 48999999999999999999999
Q ss_pred EeCcHHHHHHHHhC------------------------------------CC--CCCCcHHHHHHH-----HHHHhcccc
Q 043334 842 VLNHPQLVDAFSSF------------------------------------PG--LSKPHSTVRYAI-----KKLLGLRER 878 (903)
Q Consensus 842 v~~~~~li~~l~~~------------------------------------~~--~~~~s~~~Q~aa-----~~~L~~~~~ 878 (903)
+++++++++.+.+. .. ..+++.+.|.++ ..++ +++
T Consensus 328 ~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all--~~~ 405 (546)
T 2zy4_A 328 AAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALM--DEA 405 (546)
T ss_dssp EEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHH--CTT
T ss_pred EECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHH--hcc
Confidence 99874477766321 11 346788888874 2344 222
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHh
Q 043334 879 KARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 879 ~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+++++++.|++|++.+.
T Consensus 406 -----~~~~~~~r~~~~~r~~~l~ 424 (546)
T 2zy4_A 406 -----DEYKHTLKQLIRRRETTLY 424 (546)
T ss_dssp -----CHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHH
Confidence 3688899999999999875
No 65
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.96 E-value=2e-29 Score=282.45 Aligned_cols=251 Identities=16% Similarity=0.215 Sum_probs=203.3
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL 694 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~ 694 (903)
.++|+|+.|+|++++|+.+ ++ ..+..|.. .+..++|+++++++ |++. + +|++|+|+++++..++.++++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v--a~-~~~~~Y~~-~~~~~lr~~la~~~----~~~~--~-~v~~~~G~~~ai~~~~~~~~~ 97 (356)
T 1fg7_A 29 NGDVWLNANEYPTAVEFQL--TQ-QTLNRYPE-CQPKAVIENYAQYA----GVKP--E-QVLVSRGADEGIELLIRAFCE 97 (356)
T ss_dssp TCSEECSSCCCSSCCCCCC--CC-CCTTSCCC-SSCHHHHHHHHHHH----TSCG--G-GEEEESHHHHHHHHHHHHHCC
T ss_pred CceEEeeCCCCCCCCCHhH--hh-hhhccCCC-ccHHHHHHHHHHHh----CCCh--H-HEEEcCCHHHHHHHHHHHHhC
Confidence 3689999999999887766 22 11223433 34677888887766 5543 3 899999999999999999999
Q ss_pred CC-CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 695 EG-GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 695 pG-D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
+| |+|+++.|+|..|...++..|++++.+|++ ++|.+|++++++.++ ++ +++++++|+ ||||.+++.+++++|+
T Consensus 98 ~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~-~~v~l~~p~-nptG~~~~~~~l~~l~ 172 (356)
T 1fg7_A 98 PGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GV-KVVYVCSPN-NPTGQLINPQDFRTLL 172 (356)
T ss_dssp TTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TE-EEEEEESSC-TTTCCCCCHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CC-CEEEEeCCC-CCCCCCCCHHHHHHHH
Confidence 99 999999999999999999999999999986 357899999999887 55 589999998 9999999999999999
Q ss_pred HHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~ 853 (903)
++|+ +|++||+||+|.++.. +.. .....+.. +++++++||||.||++|+|+||++++++ +++.+.
T Consensus 173 ~~~~-~~~~li~De~~~~~~~-~~~--------~~~~~~~~----~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~l~ 237 (356)
T 1fg7_A 173 ELTR-GKAIVVADEAYIEFCP-QAS--------LAGWLAEY----PHLAILRTLSKAFALAGLRCGFTLANEE-VINLLM 237 (356)
T ss_dssp HHHT-TTCEEEEECTTGGGSG-GGC--------SGGGTTTC----TTEEEEEESSSTTCCGGGCCEEEEECHH-HHHHHH
T ss_pred HhCC-CCCEEEEEccchhhcC-CCc--------HHHHHhhC----CCEEEEecchHhhcCchhhhEEEEeCHH-HHHHHH
Confidence 9999 9999999999976541 111 11111222 4799999999999999999999999876 999998
Q ss_pred hCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 854 SFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 854 ~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.....++++.+.|.++.++|. +. .+ +++++.++.++++++.+.
T Consensus 238 ~~~~~~~~~~~~~~a~~~~l~--~~---~~-~~~~~~~~~~~~~~~~l~ 280 (356)
T 1fg7_A 238 KVIAPYPLSTPVADIAAQALS--PQ---GI-VAMRERVAQIIAEREYLI 280 (356)
T ss_dssp HHSCSSCSCHHHHHHHHHHTS--HH---HH-HHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCHHHHHHHHHHhc--Cc---cH-HHHHHHHHHHHHHHHHHH
Confidence 877766899999999999994 22 11 247778888888887764
No 66
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.96 E-value=7.9e-29 Score=277.68 Aligned_cols=256 Identities=14% Similarity=0.174 Sum_probs=208.5
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+.++|||+.|.+++++++.+.+++.+.+.. |. ..|..++++++++++ |++. + +|++|+|+++++..++
T Consensus 22 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~-~~~~~~l~~~la~~~----~~~~--~-~v~~~~g~~~al~~~~ 93 (364)
T 1lc5_A 22 SPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYP-DADYFHLHQALARHH----QVPA--S-WILAGNGETESIFTVA 93 (364)
T ss_dssp CGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCC-CTTCHHHHHHHHHHH----TSCG--G-GEEEESSHHHHHHHHH
T ss_pred CccceEEeccccCCCCCCHHHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHH----CcCH--H-HEEECCCHHHHHHHHH
Confidence 4567999999999888889999998887643 43 346778888887776 5543 3 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
.++ +||+|+++.|+|..+...++..|++++.+|++.+++|.+ ++++.+.+++++ +++++++|+ ||||.+++.+++
T Consensus 94 ~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~-~~v~i~~p~-nptG~~~~~~~l 168 (364)
T 1lc5_A 94 SGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDL-DCLFLCTPN-NPTGLLPERPLL 168 (364)
T ss_dssp HHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTC-CEEEEESSC-TTTCCCCCHHHH
T ss_pred HHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCC-CEEEEeCCC-CCCCCCCCHHHH
Confidence 888 789999999999999999999999999999976456655 555555555555 589999997 999999999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE-eCcHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV-LNHPQL 848 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv-~~~~~l 848 (903)
++|+++|+++|++||+||+|.++.+++.. .+..++.. +++++++||||.+|++|+|+||++ ++++ +
T Consensus 169 ~~i~~~~~~~~~~li~De~~~~~~~~~~~--------~~~~~~~~----~~~i~~~s~sK~~~~~G~r~G~~~~~~~~-~ 235 (364)
T 1lc5_A 169 QAIADRCKSLNINLILDEAFIDFIPHETG--------FIPALKDN----PHIWVLRSLTKFYAIPGLRLGYLVNSDDA-A 235 (364)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGSTTCCC--------SGGGCTTC----TTEEEEEESTTTTTCTTTCCEEEECCCHH-H
T ss_pred HHHHHHhhhcCcEEEEECcChhhccCccc--------hhhHhccC----CCEEEEEECchhhcCCccceEEEEECCHH-H
Confidence 99999999999999999999877765322 12212222 479999999999999999999999 7766 9
Q ss_pred HHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 849 VDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 849 i~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++.+......++++.+.|.++..+|+ .. +++++.++.++++++.+.
T Consensus 236 ~~~l~~~~~~~~~~~~~~~~~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 281 (364)
T 1lc5_A 236 MARMRRQQMPWSVNALAALAGEVALQ--DS------AWQQATWHWLREEGARFY 281 (364)
T ss_dssp HHHHHHHSCTTCSCHHHHHHHHHGGG--CH------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHh--Cc------HHHHHHHHHHHHHHHHHH
Confidence 99998877777889999999999994 22 567778888888777664
No 67
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.96 E-value=9.7e-30 Score=291.66 Aligned_cols=268 Identities=13% Similarity=0.129 Sum_probs=209.4
Q ss_pred CCCeEEccCCCCCCCC---cHHHHHHH--HHHHH-------ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCch
Q 043334 614 NSGLIHMDVDQSFLPI---PSLVKAAI--FESFA-------RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCS 681 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~---p~~v~~al--~~al~-------~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs 681 (903)
.+..|+|+.|.|+... ++.+.+++ .+++. .|....|.+++|+++++++ +++ ++ +|++|+|+
T Consensus 32 ~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~----~~~--~~-~i~~t~G~ 104 (427)
T 3ppl_A 32 KNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL----GVP--VE-QVLAGDAS 104 (427)
T ss_dssp TCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH----TSC--GG-GEEECSSC
T ss_pred CCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh----CCC--cc-eEEEeCCc
Confidence 3468999999988543 22355544 33322 3555678899999999887 443 44 89999999
Q ss_pred HHHH--HHHHHHhcc--C----------CCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCC
Q 043334 682 QSLF--NKLVLCCIL--E----------GGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKK 747 (903)
Q Consensus 682 ~~al--~~ll~~l~~--p----------GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~ 747 (903)
++++ ..++.++++ | ||+|++++|+|..|...++..|++++.+|++++ + +|++.++++++..+.
T Consensus 105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g--~d~~~l~~~l~~~~~ 181 (427)
T 3ppl_A 105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED-G--PDMDAVEELVKNPQV 181 (427)
T ss_dssp HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT-E--ECHHHHHHHTTSTTE
T ss_pred HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC-C--CCHHHHHHHHhcCCC
Confidence 9999 578888887 6 899999999999999999999999999999753 3 899999999853332
Q ss_pred cEEEEECCC-CCCcccCCCHHHHHHHHHHH-HhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEc
Q 043334 748 PWVYISGPT-INPTGLLYSNKEIENILTVC-AKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLG 825 (903)
Q Consensus 748 ~~vil~~P~-~NPTG~v~s~eel~eI~~ia-~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~ 825 (903)
++| +++|+ |||||.+++.+++++|+++| +++|++||+||+|.++.|++......+....... .+. .+++++++
T Consensus 182 ~~v-~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~i~~~ 256 (427)
T 3ppl_A 182 KGM-WVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEA-AGN---PNRFWAFT 256 (427)
T ss_dssp EEE-EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHH-TTC---TTSEEEEE
T ss_pred eEE-EECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhc-cCC---CCcEEEEe
Confidence 344 45554 59999999999999999999 9999999999999998888765322222221110 112 25899999
Q ss_pred cCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 826 GLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 826 S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
||||+ ++||+|+||++++++ +++.+..... ..+++.+.|.++..+|. +. ..+.+++.+.++.|++|++.+.
T Consensus 257 S~SK~-~~~G~r~G~~~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~--~~--~~~~~~~~~~~~~~~~~~~~l~ 329 (427)
T 3ppl_A 257 STSKI-TLAGAGVSFFLTSAE-NRKWYTGHAGIRGIGPNKVNQLAHARYFG--DA--EGVRAVMRKHAASLAPKFNKVL 329 (427)
T ss_dssp ESTTT-SCTTSSCEEEECCHH-HHHHHHHHHHHHCSCCCHHHHHHHHHHHC--SH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhc-cCcCccEEEEEcCHH-HHHHHHHHhhcccCCCCHHHHHHHHHHHh--Ch--hhHHHHHHHHHHHHHHHHHHHH
Confidence 99999 789999999999987 9998887654 77889999999999994 31 2456888999999999988764
No 68
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.96 E-value=2.9e-28 Score=273.72 Aligned_cols=255 Identities=15% Similarity=0.193 Sum_probs=211.3
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHc-------cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFAR-------QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~-------y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.|||+.|++++++++.+.+++.+.+.+ |....+ .++++++++++++.+|...+++ +|++|+|+++++..++
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~-~v~~~~G~~~al~~~~ 109 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRD-NLWAANGSNEILQQLL 109 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGG-GEEEESHHHHHHHHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChH-hEEECCChHHHHHHHH
Confidence 499999999999999999999887753 333334 6899999999999888876666 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
.+++++||.|++++|+|+.+...++..|++++.+|.+ ++|.+|++++++.+++ ++ ++|++++|+ ||||.+++.++
T Consensus 110 ~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~-~~v~~~~~~-nptG~~~~~~~ 185 (369)
T 3cq5_A 110 QAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQP-DIVFVTTPN-NPTGDVTSLDD 185 (369)
T ss_dssp HHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCC-SEEEEESSC-TTTCCCCCHHH
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCC-CEEEEeCCC-CCCCCCCCHHH
Confidence 9999999999999999999999999999999999975 4577999999999886 55 589999998 99999999777
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCC-ceEEEccCchhcccccceeeEEEeCcHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSF-NVSLLGGLSLKMLTGALKFGFLVLNHPQ 847 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~-~vI~l~S~SK~~g~~GlRiG~lv~~~~~ 847 (903)
+.+|++.| +++||+||+|+.+.++ . +.....+.. + ++++++||||.+|++|+|+||++++++
T Consensus 186 l~~l~~~~---~~~li~De~~~~~~~~--~-------~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r~G~~~~~~~- 248 (369)
T 3cq5_A 186 VERIINVA---PGIVIVDEAYAEFSPS--P-------SATTLLEKY----PTKLVVSRTMSKAFDFAGGRLGYFVANPA- 248 (369)
T ss_dssp HHHHHHHC---SSEEEEECTTGGGCCS--C-------CGGGGTTTC----TTTEEEEEESSSTTSCGGGCCEEEEECTH-
T ss_pred HHHHHHhC---CCEEEEECCchhhcCC--c-------chHHHHhhC----CCCEEEEEechHhcCCcccceEEEEeCHH-
Confidence 77776654 5999999999876543 1 112222222 3 789999999999999999999999987
Q ss_pred HHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 848 LVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 848 li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.+......++++.+.|.++..+|+ +. +++++.++.++++++.+.
T Consensus 249 ~~~~l~~~~~~~~~~~~~~~a~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 295 (369)
T 3cq5_A 249 FIDAVMLVRLPYHLSALSQAAAIVALR--HS------ADTLGTVEKLSVERVRVA 295 (369)
T ss_dssp HHHHHHTTSCTTCSCHHHHHHHHHHHH--TH------HHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHhc--CH------HHHHHHHHHHHHHHHHHH
Confidence 999998877777799999999999994 22 456677777777777654
No 69
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.96 E-value=1.9e-28 Score=273.38 Aligned_cols=254 Identities=13% Similarity=0.176 Sum_probs=207.8
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHcc--CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQ--NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y--~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
.++++|||+.|.|++++|+.+.+++.+.+... .+..+..++++++++++ |++. + +|++|+|+++++..++.
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~----~~~~--~-~i~~~~g~t~al~~~~~ 96 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYL----KLKD--I-GIVLGNGASEIIELSIS 96 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCTTCHHHHHHHHHHH----TCCS--C-EEEEESSHHHHHHHHHT
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHh----CCCc--c-eEEEcCCHHHHHHHHHH
Confidence 56789999999999999999999998887652 23456677777777765 5543 3 89999999999999888
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++ |+|+++.|+|..+...++..|++++.++++.+++ ++++++++++++ + +++++++|+ ||||.+++.++++
T Consensus 97 ~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~l~~~l~~-~-~~v~i~~p~-nptG~~~~~~~l~ 167 (361)
T 3ftb_A 97 LF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMC--IDYEDIISKIDD-V-DSVIIGNPN-NPNGGLINKEKFI 167 (361)
T ss_dssp TC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSC--CCHHHHHHHTTT-C-SEEEEETTB-TTTTBCCCHHHHH
T ss_pred Hc----CcEEEecCChHHHHHHHHHcCCeEEEeecCcccC--CCHHHHHHhccC-C-CEEEEeCCC-CCCCCCCCHHHHH
Confidence 77 8999999999999999999999999999986545 566999999987 5 599999997 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE-eCcHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV-LNHPQLV 849 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv-~~~~~li 849 (903)
+|+++|+++|+++|+||+|.++.++ ...+ ........ +++++++|+||.+|++|+|+||++ ++++ ++
T Consensus 168 ~i~~~~~~~~~~li~De~~~~~~~~-~~~~------~~~~~~~~----~~~i~~~s~sK~~~~~G~r~g~~~~~~~~-~~ 235 (361)
T 3ftb_A 168 HVLKLAEEKKKTIIIDEAFIEFTGD-PSSS------FVGEIKNY----SCLFIIRAMTKFFAMPGIRFGYGITNNKE-IA 235 (361)
T ss_dssp HHHHHHHHHTCEEEEECSSGGGTCC-TTSS------SGGGTTTC----SSEEEEEESSSTTSCGGGCCEEEEESCHH-HH
T ss_pred HHHHHhhhcCCEEEEECcchhhcCC-cccc------hhHhcccC----CCEEEEeeChhhcCCCCcceeEEEeCCHH-HH
Confidence 9999999999999999999888776 3221 12222222 479999999999999999999999 5555 99
Q ss_pred HHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 850 DAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 850 ~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+.+......++++.+.|.++..+|+ + .+++++.++.++++++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~l~--~------~~~~~~~~~~~~~~~~~l~ 280 (361)
T 3ftb_A 236 AKIKAKQNPWNINCFAEMAAINCLK--D------TNYIEESLLWIKKERKRFI 280 (361)
T ss_dssp HHHHTTSCTTCSCHHHHHHHHHTSS--C------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCCHHHHHHHHHHhc--C------HHHHHHHHHHHHHHHHHHH
Confidence 9999888788899999999999994 2 2567777777777777664
No 70
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.96 E-value=2.8e-29 Score=296.83 Aligned_cols=269 Identities=10% Similarity=0.115 Sum_probs=212.1
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHc--cC-CCCCchHHHHHHHHHHHhh-cC-CCCCCCCcEEecCchHHHHHHHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFAR--QN-MSESEIDVTPSIQQYIKSN-FG-FPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~--y~-~~~G~~~lr~ala~~l~~~-~G-~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
++|+|+.|.++++ ++.+++++.+.+.. |. +..|.+++++++++++++. .+ ++..+.++|++|+|+++++..++.
T Consensus 104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~ 182 (533)
T 3f6t_A 104 DAVNYCHTELGLN-RDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFH 182 (533)
T ss_dssp HHHHHHHHTTCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHH
T ss_pred hheeccCCCCCcC-CcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHH
Confidence 4789999999986 45555555555533 43 5678999999999999776 34 555533389999999999999998
Q ss_pred H-----hccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCC--CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 691 C-----CILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTES--EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 691 ~-----l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~--~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
+ ++++||+|+++.|+|.++...++..|++++.++++. +++|.+|++.|++++++++ ++|++++|+ ||||.+
T Consensus 183 ~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~-k~v~l~~p~-NPtG~~ 260 (533)
T 3f6t_A 183 SLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSI-KALIVVNPT-NPTSKE 260 (533)
T ss_dssp HHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTE-EEEEEESSC-TTTCBC
T ss_pred HhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCC-eEEEEeCCC-CCCccc
Confidence 8 789999999999999999999999999999999875 5678999999999998766 589999998 999999
Q ss_pred CCHHHHHHHHHHHH-hCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 764 YSNKEIENILTVCA-KYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 764 ~s~eel~eI~~ia~-k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
++.+++++|+++|+ ++|++||+||+|.++.++... ... ... +++++++||||.+|++|+|+||++
T Consensus 261 ~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~--------~~~-~~~-----~~~i~~~S~SK~~g~~G~RiG~l~ 326 (533)
T 3f6t_A 261 FDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKS--------IYS-VVP-----YNTMLVYSYSKLFGCTGWRLGVIA 326 (533)
T ss_dssp CCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCC--------HHH-HSG-----GGEEEEEESHHHHTCGGGCEEEEE
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccC--------Hhh-cCC-----CCEEEEecCcccCCCcccceEEEE
Confidence 99999999999999 689999999999877764322 222 111 489999999999999999999999
Q ss_pred eCcHHHHHHH------------------------------------HhCCC--CCCCcHHHHHH----HHHHHhcccccc
Q 043334 843 LNHPQLVDAF------------------------------------SSFPG--LSKPHSTVRYA----IKKLLGLRERKA 880 (903)
Q Consensus 843 ~~~~~li~~l------------------------------------~~~~~--~~~~s~~~Q~a----a~~~L~~~~~~~ 880 (903)
++++++++.+ ..... ..+++.+.|.+ +..+|....| .
T Consensus 327 ~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g-~ 405 (533)
T 3f6t_A 327 LNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTN-G 405 (533)
T ss_dssp EESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBG-G
T ss_pred ECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhcc-c
Confidence 9875344433 22322 56788899988 4455520000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh
Q 043334 881 RDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 881 ~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+..+.+++++++.|++|++.++
T Consensus 406 ~~~~~~~~~~~~~~~~r~~~l~ 427 (533)
T 3f6t_A 406 GSDDPYIDIARKLVSERYDQLH 427 (533)
T ss_dssp GTBCHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHH
Confidence 1124788999999999999875
No 71
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.96 E-value=1.6e-29 Score=289.05 Aligned_cols=282 Identities=9% Similarity=0.035 Sum_probs=216.0
Q ss_pred CCCCHHHHHHHHhhhhccCCCCCeEEccCCCCC---CCCcHHHHHHHH--HHH------Hcc-CCCCCchHHHHHHHHHH
Q 043334 594 FSRSAISVLNSAELSITETPNSGLIHMDVDQSF---LPIPSLVKAAIF--ESF------ARQ-NMSESEIDVTPSIQQYI 661 (903)
Q Consensus 594 l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~---~~~p~~v~~al~--~al------~~y-~~~~G~~~lr~ala~~l 661 (903)
++.+.++++..... ....|||+.|.|+ ++.|+.+.+++. +.+ ..| ....|.+++|+++++++
T Consensus 10 ~~~~~~~~~~~~~~------~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~ 83 (423)
T 3ez1_A 10 ALDLARQAYEAFKA------RGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL 83 (423)
T ss_dssp HHHHHHHHHHHHHH------HTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhc------CCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh
Confidence 33445555554322 2468999999999 777777877764 322 236 56678889999888876
Q ss_pred HhhcCCCCCCCCcEEecCchHHHHH--HHHHHhcc--C---------CCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCC
Q 043334 662 KSNFGFPIDINAEFIYADCSQSLFN--KLVLCCIL--E---------GGTLCFPAGSNGNYVSAARFLKANIVNIPTESE 728 (903)
Q Consensus 662 ~~~~G~~~~pe~~I~vt~Gs~~al~--~ll~~l~~--p---------GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~ 728 (903)
+++ ++ +|++|+|+++++. .++.++++ | ||+|+++.|+|..+...++..|++++.+|++.+
T Consensus 84 ----~~~--~~-~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 156 (423)
T 3ez1_A 84 ----DVK--AE-NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD 156 (423)
T ss_dssp ----TSC--GG-GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT
T ss_pred ----CCC--hh-hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC
Confidence 444 44 8999999999997 88888888 8 599999999999999999999999999999753
Q ss_pred CCcccCHHHHHHHhh--cCCCcEEEEE-CCCCCCcccCCCHHHHHHHHHHH-HhCCcEEEEecCCCCCccCC-CCCCCCc
Q 043334 729 VGFKMTEKTLVTILE--TVKKPWVYIS-GPTINPTGLLYSNKEIENILTVC-AKYGARVVIDTAFSGLEFNY-EGWGGWD 803 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~--~~~~~~vil~-~P~~NPTG~v~s~eel~eI~~ia-~k~~i~VI~DeaY~~l~f~~-~~~s~~s 803 (903)
.+|+++|+++++ +++ ++|+++ +|+ ||||.+++.+++++|+++| +++|++||+||+|..+.|.+ ......+
T Consensus 157 ---g~d~~~l~~~l~~~~~~-~~v~~~~~~~-NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~ 231 (423)
T 3ez1_A 157 ---GPDVDAVERLAGTDPSV-KGILFVPTYS-NPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVN 231 (423)
T ss_dssp ---EECHHHHHHHHHSCTTE-EEEEECSSSC-TTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCC
T ss_pred ---CCCHHHHHHHHhhCCCc-eEEEECCCCC-CCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcc
Confidence 389999999995 333 355433 555 9999999999999999999 99999999999999777765 2211122
Q ss_pred hhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccch
Q 043334 804 LEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKAR 881 (903)
Q Consensus 804 ~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~ 881 (903)
........ +. .+++++++||||. +++|+|+||++++++ +++.+..... ..+++.+.|.++..+|. + ...
T Consensus 232 ~~~~~~~~-~~---~~~~i~~~S~sK~-~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~-~~~ 302 (423)
T 3ez1_A 232 FVVLARDA-GY---PDRAFVFASTSKI-TFAGAGLGFVASSED-NIRWLSKYLGAQSIGPNKVEQARHVKFLT--E-YPG 302 (423)
T ss_dssp HHHHHHHH-TC---TTSEEEEEESTTT-SCSSSSCEEEEECHH-HHHHHHHHHHHSCSCCCHHHHHHHHHHHH--H-STT
T ss_pred hhhhhhcc-CC---CCeEEEEeCchhh-ccCCcceEEEEeCHH-HHHHHHHHHhhhccCCCHHHHHHHHHHHH--h-ccc
Confidence 22211111 12 2589999999998 689999999999987 9999887653 67889999999999995 2 012
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 043334 882 DLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 882 ~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+.+++++.++.|++|++.+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~ 323 (423)
T 3ez1_A 303 GLEGLMRDHAAIIAPKFRAVD 323 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 456788888999988887764
No 72
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.93 E-value=1.9e-31 Score=302.31 Aligned_cols=269 Identities=13% Similarity=0.133 Sum_probs=220.8
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHcc--CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQ--NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI 693 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y--~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~ 693 (903)
++|+|+.|++++++++.+.+++.+.+... .+..+..++++++++++++.+|.+.+++ +|++|+|+++++..++.+++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~-~v~~~~g~~~a~~~~~~~~~ 110 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYASDELLQAVLDWEKSEHQYSFDKE-DIVFVEGVVPAISIAIQAFT 110 (392)
Confidence 79999999999999999999988877431 2222367899999999998889766666 89999999999999999999
Q ss_pred cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCC-CcccCHHHHHHHhh-cCCCcEEEEECCCCCCcccCCCHHHHHH
Q 043334 694 LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEV-GFKMTEKTLVTILE-TVKKPWVYISGPTINPTGLLYSNKEIEN 771 (903)
Q Consensus 694 ~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~-~f~ld~~~L~~~l~-~~~~~~vil~~P~~NPTG~v~s~eel~e 771 (903)
++||+|+++.|+|..+...++..|++++.+++++++ +|.+|++.+++.++ .++ +++++++|+ ||||.+++.+++++
T Consensus 111 ~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~-~~v~~~~~~-nptG~~~~~~~l~~ 188 (392)
T 3b1d_A 111 KEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDV-KLYLLCNPH-NPGGRVWEREVLEQ 188 (392)
Confidence 999999999999999999999999999999986433 58899999999887 444 588889997 99999999999999
Q ss_pred HHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH
Q 043334 772 ILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 772 I~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~ 851 (903)
|+++|+++|++||+||+|.++.|++... .+ +..+.... .+++++++||||.+|++|+|+||++++++++++.
T Consensus 189 l~~~~~~~~~~li~De~~~~~~~~g~~~--~~----~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 260 (392)
T 3b1d_A 189 IGHLCQKHHVILVSDEIHQDLTLFGHEH--VS----FNTVSPDF--KDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQ 260 (392)
Confidence 9999999999999999999988876432 11 11121100 1479999999999999999999999986558888
Q ss_pred HHhCCCC---CCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 852 FSSFPGL---SKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 852 l~~~~~~---~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+...... .+++.+.|.++..+|. ++ .++++++++.++++++.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~a~~~~l~--~~-----~~~~~~~~~~~~~~~~~l~ 307 (392)
T 3b1d_A 261 FKHQQLVNNHHEVSSLGYIATETAYR--YG-----KPWLVALKAVLEENIQFAV 307 (392)
Confidence 8876652 3568889999999884 22 2567778888888877664
No 73
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.96 E-value=3.8e-28 Score=276.55 Aligned_cols=265 Identities=15% Similarity=0.169 Sum_probs=200.1
Q ss_pred CCCCeEEccCCCCCCCCc--HHHHHHHHHHHH---------ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCch
Q 043334 613 PNSGLIHMDVDQSFLPIP--SLVKAAIFESFA---------RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCS 681 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p--~~v~~al~~al~---------~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs 681 (903)
.++++|+|+.|.|+..++ +.+.+++.+.+. .|....|.+++|+++++++.+.+|+..+++ +|++|+|+
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~ 107 (417)
T 3g7q_A 29 RTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQ-NIALTNGS 107 (417)
T ss_dssp ---CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGG-GEEEESCH
T ss_pred cCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcc-cEEEeCCc
Confidence 457899999999987543 456666665542 466778999999999999999999888877 99999999
Q ss_pred HHHHHHHHHHhccCCC-----eEEEc-CCCcHHHHHHHHH------cCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcE
Q 043334 682 QSLFNKLVLCCILEGG-----TLCFP-AGSNGNYVSAARF------LKANIVNIPTESEVGFKMTEKTLVTILETVKKPW 749 (903)
Q Consensus 682 ~~al~~ll~~l~~pGD-----~Vlv~-~P~y~~~~~~~~~------~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~ 749 (903)
++++..++.+++++|| .|+++ .|+|+.|...+.. .+..+..++.+. .+|.+|+++++ +++++ ++
T Consensus 108 t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~--~~~~~-~~ 183 (417)
T 3g7q_A 108 QSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ-FKYHVDFEHLH--IGEET-GM 183 (417)
T ss_dssp HHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE-EEEECCGGGCC--CCTTE-EE
T ss_pred HHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc-cccccCHHHhc--cccCc-eE
Confidence 9999999999999988 89997 9999999877643 234555555321 25678988887 55555 58
Q ss_pred EEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 750 VYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 750 vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
+++++|+ ||||.+++.+++++|+++|+++|++||+||+|+... .+... ... .... .+++++++||||
T Consensus 184 v~~~~p~-NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~-~~~~~--~~~------~~~~---~~~~i~~~s~sK 250 (417)
T 3g7q_A 184 ICVSRPT-NPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPF-PGIIF--SEA------RPLW---NPNIILCMSLSK 250 (417)
T ss_dssp EEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTT-TCCBC--SCC------CCCC---CTTEEEEEESGG
T ss_pred EEECCCC-CCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccc-ccccc--ccc------ccCC---CCCEEEEEechh
Confidence 9999998 999999999999999999999999999999997522 11110 000 0111 258999999999
Q ss_pred hcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHH-HHHHHHHHHHHHh
Q 043334 830 KMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAE-HIRNLESRSKRLK 902 (903)
Q Consensus 830 ~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~-~r~~y~~Rr~~l~ 902 (903)
++++|+|+||++++++ +++.+..... ..+++.+.|.++..+|. ++ .+.++..+ +++.|++|++.+.
T Consensus 251 -~~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~---~~~~~~~~~~~~~~~~~~~~~~ 319 (417)
T 3g7q_A 251 -LGLPGSRCGIIIANDK-TITAIANMNGIISLAPGGMGPAMMCEMIK--RN---DLLRLSETVIKPFYYQRVQQTI 319 (417)
T ss_dssp -GTCTTSCCEEEECCHH-HHHHHHHHHHHHCCCCCSHHHHHHHHHHH--TT---CHHHHHHHTHHHHHHHHHHHHH
T ss_pred -ccCCCcceEEEEeCHH-HHHHHHHhhcceeeCCCcHHHHHHHHHHc--Cc---chHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999887 9998887654 66788999999999994 33 23445544 7777888877654
No 74
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.96 E-value=6.8e-28 Score=270.72 Aligned_cols=230 Identities=13% Similarity=0.161 Sum_probs=193.4
Q ss_pred ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEE
Q 043334 643 RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVN 722 (903)
Q Consensus 643 ~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~ 722 (903)
.|.+..|.+++++++++++. ++ +++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.
T Consensus 58 ~y~~~~g~~~l~~~la~~~~---~~--~~~-~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~ 131 (375)
T 3op7_A 58 NYGWIEGSPAFKKSVSQLYT---GV--KPE-QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDL 131 (375)
T ss_dssp SSCCTTCCHHHHHHHHTTSS---SC--CGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHHTTCEEEE
T ss_pred CCCCCCChHHHHHHHHHHhc---cC--Chh-hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEE
Confidence 36666778888888887652 33 334 8999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCC
Q 043334 723 IPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGW 802 (903)
Q Consensus 723 v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~ 802 (903)
++++.+++|.+|++++++++++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|+.+.+++..
T Consensus 132 v~~~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~~-nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~---- 205 (375)
T 3op7_A 132 WQIEEENGWLPDLEKLRQLIRPTT-KMICINNAN-NPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVP---- 205 (375)
T ss_dssp EEEEGGGTTEECHHHHHHHCCTTC-CEEEEESSC-TTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCC----
T ss_pred EeccccCCCCCCHHHHHHhhccCC-eEEEEcCCC-CCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCC----
Confidence 999876789999999999998766 589999997 99999999999999999999999999999999987776221
Q ss_pred chhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccc
Q 043334 803 DLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKA 880 (903)
Q Consensus 803 s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~ 880 (903)
.... . . +++++++||||.+|++|+|+||++++++ +++.+..... ..+++.+.|.++..+|. .
T Consensus 206 ---~~~~-~--~----~~~i~~~s~sK~~~~~G~r~G~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~--- 269 (375)
T 3op7_A 206 ---SIIE-V--Y----DKGIAVNSLSKTYSLPGIRIGWVAANHQ-VTDILRDYRDYTMICAGVFDDLVAQLALA--H--- 269 (375)
T ss_dssp ---CHHH-H--C----TTEEEEEESSSSSSCGGGCCEEEECCHH-HHHHHTTTGGGTTSCCCHHHHHHHHHHHH--T---
T ss_pred ---chhh-h--c----CCEEEEeEChhhcCCcccceEEEEeCHH-HHHHHHHHHhhhccCCCcHHHHHHHHHHh--c---
Confidence 1121 1 1 4789999999999999999999999766 9999987664 56678899999988884 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh
Q 043334 881 RDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 881 ~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+.++++.++.++++++.+.
T Consensus 270 --~~~~~~~~~~~~~~~~~~l~ 289 (375)
T 3op7_A 270 --YQEILERNRHILEENLAILD 289 (375)
T ss_dssp --HHHHHHHHHHHHHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHHHHHHH
Confidence 24677778888888777664
No 75
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=2.7e-27 Score=261.46 Aligned_cols=227 Identities=15% Similarity=0.165 Sum_probs=185.0
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHcc--CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQ--NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y--~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
...+.|+|+.+++++++++.+.+++.+..... .+..|..++|+++++++ |++.+ +|++|+|+++++..++.
T Consensus 14 ~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~----~~~~~---~i~~t~G~~~~l~~~~~ 86 (337)
T 3p1t_A 14 AAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHF----SCPED---NLMLVRGIDECFDRISA 86 (337)
T ss_dssp CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSCCTTHHHHHHHHHHHHH----TSCGG---GEEEESHHHHHHHHHHH
T ss_pred CCCCceEeeCCCCCCCCCHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHh----CcCHH---HEEEeCCHHHHHHHHHH
Confidence 55679999999999999999999998876542 13345666666666654 65443 89999999999999988
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++ +||+|+++.|+|..+...++..|++++.++++. +|.+|++++++. .++ +++++++|+ ||||.+++.+++.
T Consensus 87 ~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~~~-~~v~i~~p~-nptG~~~~~~~l~ 158 (337)
T 3p1t_A 87 EF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--SRD-DCVVLANPS-NPTGQALSAGELD 158 (337)
T ss_dssp HS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--CTT-EEEEEESSC-TTTCCCCCHHHHH
T ss_pred hc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--cCC-CEEEEeCCC-CCCCCCCCHHHHH
Confidence 87 999999999999999999999999999999864 577999999876 234 599999998 9999999977666
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
+| |+++++ +|+||+|.++.+.+... . .. .+++++++||||.+|++|+|+||++++++ +++
T Consensus 159 ~l---~~~~~~-~ivDea~~~~~~~~~~~--------~----~~---~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~~ 218 (337)
T 3p1t_A 159 QL---RQRAGK-LLIDETYVDYSSFRARG--------L----AY---GENELVFRSFSKSYGLAGLRLGALFGPSE-LIA 218 (337)
T ss_dssp HH---HHHCSE-EEEECTTGGGSSCSSSC--------C----CC---BTTEEEEEESSSTTCCTTTCCEEEECCHH-HHH
T ss_pred HH---HHhCCc-EEEECCChhhccccccc--------c----cc---CCCEEEEeeCchhccCcchheEEEEeCHH-HHH
Confidence 55 566776 55699997655433210 0 11 14799999999999999999999999987 999
Q ss_pred HHHhCCCCCCCcHHHHHHHHHHHh
Q 043334 851 AFSSFPGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 851 ~l~~~~~~~~~s~~~Q~aa~~~L~ 874 (903)
.+.+.....+++.+.|.++..+|+
T Consensus 219 ~l~~~~~~~~~~~~~~~a~~~~l~ 242 (337)
T 3p1t_A 219 AMKRKQWFCNVGTLDLHALEAALD 242 (337)
T ss_dssp HHHTTSCTTCSCHHHHHHHHHHHT
T ss_pred HHHhhcCCCCCCHHHHHHHHHHhC
Confidence 998887788889999999999994
No 76
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=4.7e-28 Score=278.73 Aligned_cols=267 Identities=13% Similarity=0.108 Sum_probs=208.7
Q ss_pred CCCeE-EccCCCCCCCCc--HHHHHHHHHHHHc----------------cCCCCCchHHHHHHHHHHHhhcCCCCCCCCc
Q 043334 614 NSGLI-HMDVDQSFLPIP--SLVKAAIFESFAR----------------QNMSESEIDVTPSIQQYIKSNFGFPIDINAE 674 (903)
Q Consensus 614 ~~~~I-dLs~g~p~~~~p--~~v~~al~~al~~----------------y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~ 674 (903)
.+++| +|+.|.|+.+++ +.+.+++.+.+.. |....|.+++|+++++++.+.+|+..+++ +
T Consensus 30 ~~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~ 108 (444)
T 3if2_A 30 SDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSE-N 108 (444)
T ss_dssp SSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-G
T ss_pred CchhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHH-H
Confidence 36899 999999987533 4455666554433 55567889999999999999999888877 9
Q ss_pred EEecCchHHHHHHHHHHhccCCC--------------eEEEc-CCCcHHHHHH------HHHcCCEEEEecCCCCC---C
Q 043334 675 FIYADCSQSLFNKLVLCCILEGG--------------TLCFP-AGSNGNYVSA------ARFLKANIVNIPTESEV---G 730 (903)
Q Consensus 675 I~vt~Gs~~al~~ll~~l~~pGD--------------~Vlv~-~P~y~~~~~~------~~~~G~~vv~v~~~~~~---~ 730 (903)
|++|+|+++++..++.+++++|| .|+++ .|+|+.|... +...|.+++.++++.++ +
T Consensus 109 i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 188 (444)
T 3if2_A 109 IALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFK 188 (444)
T ss_dssp EEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEE
T ss_pred EEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccc
Confidence 99999999999999999999998 78876 9999998873 35568889999887532 3
Q ss_pred cccCHHHHHHH---hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhh
Q 043334 731 FKMTEKTLVTI---LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 731 f~ld~~~L~~~---l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~ 807 (903)
|.+|+++|+++ +++++ ++|++++|+ ||||.+++.+++++|+++|+++|++||+||+|+... .+... ...
T Consensus 189 ~~~d~~~l~~~l~~~~~~~-~~v~i~~p~-nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~-~~~~~--~~~--- 260 (444)
T 3if2_A 189 YRVDFEALENLPALKEGRI-GAICCSRPT-NPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPF-PNIIY--SDA--- 260 (444)
T ss_dssp EECCHHHHHTCHHHHTTCE-EEEEEESSC-TTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTT-TCCBC--SCC---
T ss_pred cCCCHHHHHHHHHhcCCCc-eEEEeCCCC-CCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcc-ccccc--ccc---
Confidence 78999999988 55555 589999997 999999999999999999999999999999997421 11110 000
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHH
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMN 885 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~ 885 (903)
.... .+++++++||||. +++|+|+||++++++ +++.+..... ..+++.+.|.++..++. .+ .+..
T Consensus 261 ---~~~~---~~~~i~~~S~sK~-~~~G~r~G~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~---~~~~ 327 (444)
T 3if2_A 261 ---HLNW---DNNTILCFSLSKI-GLPGMRTGIIVADAK-VIEAVSAMNAVVNLAPTRFGAAIATPLVA--ND---RIKQ 327 (444)
T ss_dssp ---CCCC---CTTEEEEEESTTT-TCGGGCCEEEECCHH-HHHHHHHHHHHHHSSCCCHHHHHHHHHHH--TS---HHHH
T ss_pred ---cccC---CCCEEEEechhhc-cCCCCceEEEEECHH-HHHHHHHHHHhccCCCChHHHHHHHHHHH--cC---chhH
Confidence 0111 2589999999996 889999999999887 9888887654 56778899999999994 33 2334
Q ss_pred HHHH-HHHHHHHHHHHHh
Q 043334 886 AVAE-HIRNLESRSKRLK 902 (903)
Q Consensus 886 ~l~~-~r~~y~~Rr~~l~ 902 (903)
+..+ +++.|++|++.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~ 345 (444)
T 3if2_A 328 LSDNEIKPFYQKQATLAV 345 (444)
T ss_dssp HHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 4444 6777888777653
No 77
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=7.4e-27 Score=261.23 Aligned_cols=249 Identities=15% Similarity=0.204 Sum_probs=198.3
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHcc------CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQ------NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y------~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
.+.++|+|+.|+|++++++.+.+++.+.+.+. .+..+..++++++++++ |++ ++ +|++|+|+++++.
T Consensus 24 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~lr~~la~~~----g~~--~~-~i~~t~g~~~al~ 96 (360)
T 3hdo_A 24 DIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGELY----GFD--PS-WIIMANGSDEVLN 96 (360)
T ss_dssp CCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHHHH----TCC--GG-GEEEESSHHHHHH
T ss_pred cccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCchHHHHHHHHHHh----CcC--cc-eEEEcCCHHHHHH
Confidence 45689999999999999999999999987652 12234566777776665 544 34 8999999999999
Q ss_pred HHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCH
Q 043334 687 KLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSN 766 (903)
Q Consensus 687 ~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ 766 (903)
.++.+++++||+|+++.|+|..+...++..|++++.++++. +|.+ +++.+.+ ++ +++++++|+ ||||.+++.
T Consensus 97 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~-~~v~i~~p~-nptG~~~~~ 168 (360)
T 3hdo_A 97 NLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EG-KVFFLTTPN-APLGPSFPL 168 (360)
T ss_dssp HHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CS-SEEEEESSC-TTTCCCCCH
T ss_pred HHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CC-CEEEEeCCC-CCCCCCcCH
Confidence 99999999999999999999999999999999999999964 4555 4443322 23 599999997 999999996
Q ss_pred HHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 767 KEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 767 eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
++ |.++|+++|++||+||+|+++ .+... . +.. +.. +++++++||||.+|++|+|+||++++++
T Consensus 169 ~~---l~~l~~~~~~~li~De~~~~~--~~~~~--~---~~~---~~~----~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 231 (360)
T 3hdo_A 169 EY---IDELARRCAGMLVLDETYAEF--AESNA--L---ELV---RRH----ENVVVTRTLSKSYSLAGMRIGLAIARPE 231 (360)
T ss_dssp HH---HHHHHHHBSSEEEEECTTGGG--SSCCC--T---HHH---HHC----SSEEEEEESTTTTSCTTSCCEEEECCHH
T ss_pred HH---HHHHHHHCCCEEEEECChHhh--CCcch--h---HHh---ccC----CCEEEEecchHhhcCCccceeeEeeCHH
Confidence 65 555567889999999999764 33321 1 111 222 4799999999999999999999999876
Q ss_pred HHHHHHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 847 QLVDAFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 847 ~li~~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++.+......++++.+.|.++..+|+ +. +++++.++.++++++.+.
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 278 (360)
T 3hdo_A 232 -VIAALDKIRDHYNLDRLAQAACVAALR--DQ------AYLSECCRRIRETREWFT 278 (360)
T ss_dssp -HHHHHHHHSCSCCSCHHHHHHHHHHHH--CH------HHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHhCCCCCCCHHHHHHHHHHhc--CH------HHHHHHHHHHHHHHHHHH
Confidence 999999887778899999999999995 22 467777777777777664
No 78
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.95 E-value=7.6e-27 Score=259.88 Aligned_cols=225 Identities=13% Similarity=0.162 Sum_probs=184.2
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHc---cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFAR---QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~---y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.+.++|||+.|+|++++++.+.+++.+.+.. |....+ .++|++++++ +|++.+ +|++|+|+++++..++
T Consensus 13 ~g~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~-~~lr~~la~~----~~~~~~---~i~~t~g~~~al~~~~ 84 (350)
T 3fkd_A 13 LSSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDA-GTLRQMLAKR----NSVDNN---AILVTNGPTAAFYQIA 84 (350)
T ss_dssp ---CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTTC-HHHHHHHHHH----TTCCGG---GEEEESHHHHHHHHHH
T ss_pred ccccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCcH-HHHHHHHHHH----hCcCHH---HEEEcCCHHHHHHHHH
Confidence 4578999999999999999999999887643 333333 5566665554 565433 8999999999999999
Q ss_pred HHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecC-CCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHH
Q 043334 690 LCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPT-ESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~-~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
.+++ ||+|+++.|+|..+...++..|++++.+++ ++++++.+ +++ ++|++++|+ ||||.+++.++
T Consensus 85 ~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~----------~~~-~~v~i~~p~-nptG~~~~~~~ 150 (350)
T 3fkd_A 85 QAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF----------SNM-DFCWLCNPN-NPDGRLLQRTE 150 (350)
T ss_dssp HHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC----------TTC-SEEEEESSC-TTTCCCCCHHH
T ss_pred HHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc----------CCC-CEEEEeCCC-CCcCCCCCHHH
Confidence 9887 999999999999999999999999999999 65445433 345 589999998 99999999999
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 769 IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 769 l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
+.+|++.|+++ +||+||+|.++.+++... ...++.. +++++++||||.+|++|+|+||++++++ +
T Consensus 151 l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--------~~~~~~~----~~~i~~~S~sK~~~~~G~r~G~~~~~~~-~ 215 (350)
T 3fkd_A 151 ILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--------PADIKGR----KNLVMVYSFSHAYGIPGLRIGYIVANKD-F 215 (350)
T ss_dssp HHHHHHHCTTS--EEEEECTTTTSCSSCCCC--------GGGGTTC----SSEEEEEESHHHHSCGGGCCEEEECCHH-H
T ss_pred HHHHHHhCCCC--EEEEECchhhhccCcchh--------hHHhhcC----CCEEEEecCchhccCcchheEeEEeCHH-H
Confidence 99999988765 999999999887766542 1222222 5899999999999999999999999776 9
Q ss_pred HHHHHhCCCCCCCcHHHHHHHHHHHh
Q 043334 849 VDAFSSFPGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 849 i~~l~~~~~~~~~s~~~Q~aa~~~L~ 874 (903)
++.+.......+++.+.|.++..+|.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~l~ 241 (350)
T 3fkd_A 216 MKRVAAFSTPWAVNALAIEAAKFILI 241 (350)
T ss_dssp HHHHHTTCCTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHh
Confidence 99999988888899999999999995
No 79
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.95 E-value=1.6e-28 Score=279.06 Aligned_cols=252 Identities=12% Similarity=0.091 Sum_probs=195.3
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHH--------HccCCCCCc-----hHHHHHHHHHHHhhcCCCCCCCCcEEec
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESF--------ARQNMSESE-----IDVTPSIQQYIKSNFGFPIDINAEFIYA 678 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al--------~~y~~~~G~-----~~lr~ala~~l~~~~G~~~~pe~~I~vt 678 (903)
..++++|+|+.|.|++++|+.+.+++.+.. ..|....|. +++|+++++++. .+|++..++++|++|
T Consensus 19 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t 97 (391)
T 3bwn_A 19 PMSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVG 97 (391)
T ss_dssp CTTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEE
T ss_pred cCCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEe
Confidence 356789999999999887777776652221 235667788 999999999998 578887764589999
Q ss_pred CchHHHHHHHHHHhccCCC----eEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEEC
Q 043334 679 DCSQSLFNKLVLCCILEGG----TLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISG 754 (903)
Q Consensus 679 ~Gs~~al~~ll~~l~~pGD----~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~ 754 (903)
+|+++++..++.+++++|| +|++++|+|+.|...++..|++++.++++. +++. .+++ ++|++++
T Consensus 98 ~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~-~~l~----------~~~~-k~v~l~~ 165 (391)
T 3bwn_A 98 TGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDA-WGFD----------KKGP-YIELVTS 165 (391)
T ss_dssp EHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEES-TTCC----------CCSC-EEEEEES
T ss_pred CChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCH-HHcC----------CCCC-EEEEECC
Confidence 9999999999999999999 999999999999999999999999998865 3432 1344 5888999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc
Q 043334 755 PTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG 834 (903)
Q Consensus 755 P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~ 834 (903)
|| ||||.+++ +|++.+.+++++||+||+|.. + ..+ + +.. . .+++|+++||||+||++
T Consensus 166 p~-NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~--~----l~~---~---~~~~i~~~S~SK~~g~~ 222 (391)
T 3bwn_A 166 PN-NPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYT--P----ITR---R---QDHDIMLFTFSKITGHA 222 (391)
T ss_dssp SC-TTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTS--C----CCC---C---BCCSEEEEEHHHHHSCG
T ss_pred CC-CCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCC--c----ccc---C---CCCeEEEEechhhcCCC
Confidence 98 99999997 354422223399999999962 2 111 1 111 1 15899999999999999
Q ss_pred cceeeEEEe-CcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccc-----hhHHHHHHHHHHHHHHHHHHHh
Q 043334 835 ALKFGFLVL-NHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKA-----RDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 835 GlRiG~lv~-~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~-----~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|+|+||+++ +++ +++.+..... .++++.+.|.++..+|. ++.. +.++++++++++.|++|++.+.
T Consensus 223 GlRiG~~~~~~~~-l~~~l~~~~~~~~~~~~~~~q~a~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 295 (391)
T 3bwn_A 223 GSRIGWALVKDKE-VAKKMVEYIIVNSIGVSKESQVRTAKILN--VLKETCKSESESENFFKYGREMMKNRWEKLR 295 (391)
T ss_dssp GGCEEEEEECCHH-HHHHHHHHHHHHHSSCCHHHHHHHHHHHH--HHHHHTTCCCTTTSHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEecCHH-HHHHHHHHhcccccCCCHHHHHHHHHHHh--CcchhccccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 555 9999888765 57889999999999994 2200 0013678899999999999875
No 80
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.95 E-value=3e-27 Score=261.98 Aligned_cols=244 Identities=18% Similarity=0.313 Sum_probs=195.7
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
.+.|+|+.|.+++++|+.+.+++.+.+.. +.+..+..++|+++++++.+. +.+++ +|++|+|+++++..++.
T Consensus 19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~lr~~la~~~~~~---~~~~~-~v~~~~G~~~al~~~~~ 94 (335)
T 1uu1_A 19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTD---FLSKN-NVSVGNGADEIIYVMML 94 (335)
T ss_dssp CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCSSCHHHHHHHHHHHTCS---SCCGG-GEEEESSHHHHHHHHHH
T ss_pred CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHcCCC---CCCHH-HEEEcCChHHHHHHHHH
Confidence 36899999999888899999999887621 122346788899998888643 23344 89999999999999998
Q ss_pred HhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++ ||+|+++ |+|..+...++..|++++.+|++. +|.+|++++ +++ ++|++++|+ ||||.+++.++++
T Consensus 95 ~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l-----~~~-~~v~l~~p~-nptG~~~~~~~l~ 161 (335)
T 1uu1_A 95 MF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVNV-----GEG-DVVFIPNPN-NPTGHVFEREEIE 161 (335)
T ss_dssp HS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCCT--TSCCCCCCC-----CTT-EEEEEESSC-TTTCCCCCHHHHH
T ss_pred Hh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCC--CCCCCHHHc-----CCC-CEEEEeCCC-CCCCCCCCHHHHH
Confidence 87 8999999 999999999999999999999863 467887766 344 588889997 9999999999999
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
+|++.| | ++|+||+|+++.+. .. ...++.. +++++++||||.+|++|+|+||++++++ +++
T Consensus 162 ~l~~~~---~-~li~De~~~~~~~~--~~--------~~~~~~~----~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~ 222 (335)
T 1uu1_A 162 RILKTG---A-FVALDEAYYEFHGE--SY--------VDFLKKY----ENLAVIRTFSKAFSLAAQRVGYVVASEK-FID 222 (335)
T ss_dssp HHHHTT---C-EEEEECTTHHHHCC--CC--------GGGGGTC----SSEEEEEESTTTTTCGGGCCEEEEECHH-HHH
T ss_pred HHHHhC---C-EEEEECcchhhcch--hH--------HHHhhhC----CCEEEEecchhhcCCcccCeEEEEeCHH-HHH
Confidence 998877 7 89999999765432 11 1112222 4799999999999999999999999776 999
Q ss_pred HHHhCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 851 AFSSFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.+.......+++.+.|.++..+|+ +. +++++.++.++++++.+.
T Consensus 223 ~l~~~~~~~~~~~~~~~~~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 266 (335)
T 1uu1_A 223 AYNRVRLPFNVSYVSQMFAKVALD--HR------EIFEERTKFIVEERERMK 266 (335)
T ss_dssp HHHHHSCTTCSCHHHHHHHHHHHH--TH------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCcCHHHHHHHHHHhC--CH------HHHHHHHHHHHHHHHHHH
Confidence 998877767899999999999994 22 456677777777777664
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.94 E-value=4e-27 Score=270.85 Aligned_cols=248 Identities=11% Similarity=0.089 Sum_probs=196.8
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHc-------cCCCC-C---chHHHHHHHHHHHhhcCCCCCCCCcEEecCchH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFAR-------QNMSE-S---EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ 682 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~-------y~~~~-G---~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~ 682 (903)
+..+|+|+.|+|++++|+.+.+++.+++.. |.... | .+++|+++++++.+..+...+++ +|++|+|++
T Consensus 55 ~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~-~iv~t~G~~ 133 (427)
T 2hox_A 55 QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR-YIVFGVGVT 133 (427)
T ss_dssp TTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC-EEEEESHHH
T ss_pred CCceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC-EEEEeCCHH
Confidence 457899999999998888888888776521 44555 8 89999999999998776666666 999999999
Q ss_pred HHHHHHHHHh--------ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEEC
Q 043334 683 SLFNKLVLCC--------ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISG 754 (903)
Q Consensus 683 ~al~~ll~~l--------~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~ 754 (903)
+++..++.++ ++|||.|+++.|+|+.|...++..|++++. |.+|++.|++.+++++ ++|++++
T Consensus 134 ~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~-k~v~l~~ 204 (427)
T 2hox_A 134 QLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQ-YIEMVTS 204 (427)
T ss_dssp HHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGG-EEEEEES
T ss_pred HHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee--------ecCCHHHHHHhhcCCc-eEEEEcC
Confidence 9999999999 999999999999999999999999998764 3466778887776655 5899999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc
Q 043334 755 PTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG 834 (903)
Q Consensus 755 P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~ 834 (903)
|+ ||||.+++ +.+ + ++.+|.|+.|. ++ ..+. ..+. . +++|+++||||.+|++
T Consensus 205 p~-NPtG~~~~-~~l-------~--~~~~i~d~~~~----~~-~~s~-------~~~~-~----~~~i~~~S~SK~~g~~ 256 (427)
T 2hox_A 205 PN-NPEGLLRH-AVI-------K--GCKSIYDMVYY----WP-HYTP-------IKYK-A----DEDILLFTMSKFTGHS 256 (427)
T ss_dssp SC-TTTCCCCC-CSS-------T--TCEEEEECTTC----ST-TTSC-------CCSC-B----CCSEEEEEHHHHTSCG
T ss_pred CC-CCcccccH-HHH-------c--CCCEEEeeccc----CC-CCCc-------cccC-C----CceEEEEeChhcCCCC
Confidence 98 99999999 422 2 56678888773 22 2111 1122 1 4899999999999999
Q ss_pred cceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccch-------hHHHHHHHHHHHHHHHHHHHh
Q 043334 835 ALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKAR-------DLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 835 GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~-------~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|+|+||++++++++++.+.++.. ..+++.+.|.++..+|. ++. + .+++++.+.++.|++|++.+.
T Consensus 257 G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~--~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 330 (427)
T 2hox_A 257 GSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLK--EVV-AMVKTQKGTMRDLNTFGFKKLRERWVNIT 330 (427)
T ss_dssp GGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHH--HHH-HHHHHHTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhh--cch-hhhccccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999965449999988765 57899999999999994 220 1 123577888899999998875
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.93 E-value=1.1e-24 Score=246.71 Aligned_cols=252 Identities=13% Similarity=0.159 Sum_probs=199.4
Q ss_pred CCCCeEEccCCCC-CCCCcHHHHHHHHHHHHcc-------CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNSGLIHMDVDQS-FLPIPSLVKAAIFESFARQ-------NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~~~IdLs~g~p-~~~~p~~v~~al~~al~~y-------~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.+.+.|||+.|++ ++++++.+.+++.+.+..+ ....|.+++++++++++++.+|. + ++++|+|++++
T Consensus 41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~---~v~~~~ggt~a 115 (398)
T 3a2b_A 41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--E---AAILFSTGFQS 115 (398)
T ss_dssp TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--S---EEEEESSHHHH
T ss_pred CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--C---cEEEECCHHHH
Confidence 4567899999988 6667889999998887642 23457789999999999999885 2 79999999999
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC---CCcEEEEECCCCCCcc
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV---KKPWVYISGPTINPTG 761 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~---~~~~vil~~P~~NPTG 761 (903)
+..++.+++++||.|++++|+|+.+...++..|++++.+|+ +|++.+++.+++. ..++|++++|+ ||||
T Consensus 116 ~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~-nptG 187 (398)
T 3a2b_A 116 NLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIF-SMEG 187 (398)
T ss_dssp HHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBC-TTTC
T ss_pred HHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCC-CCCC
Confidence 99999999999999999999999999999999999999986 4789999998762 23589999997 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCc-eEEEccCchhcccccceeeE
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFN-VSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~-vI~l~S~SK~~g~~GlRiG~ 840 (903)
.+++ +++|.++|+++|++||+||+|+.+.|+.... +.....+ .. ++ +++++||||.++++| ||
T Consensus 188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~------~~~~~~~-~~---~~~di~~~s~sK~~~~~G---G~ 251 (398)
T 3a2b_A 188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGA------GTASHFG-LN---DDVDLIMGTFSKSLASLG---GF 251 (398)
T ss_dssp CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGC------CHHHHHT-CG---GGCSEEEEESSSTTCSSC---EE
T ss_pred CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCC------chHhhcC-CC---cCCeEEEecccccccCCC---cE
Confidence 9998 8899999999999999999998777753221 1122111 11 24 699999999999888 99
Q ss_pred EEeCcHHHHHHHHhCC---CCCCCcHHHHHH-HHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 841 LVLNHPQLVDAFSSFP---GLSKPHSTVRYA-IKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 841 lv~~~~~li~~l~~~~---~~~~~s~~~Q~a-a~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++++ +++.+.... ...+.+.+.|.+ +..+|+ .. ++++++++.++++++.+.
T Consensus 252 ~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~--~~------~~~~~~~~~~~~~~~~l~ 308 (398)
T 3a2b_A 252 VAGDAD-VIDFLKHNARSVMFSASMTPASVASTLKALE--II------QNEPEHIEKLWKNTDYAK 308 (398)
T ss_dssp EEECHH-HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHH--HH------HHCTHHHHHHHHHHHHHH
T ss_pred EEeCHH-HHHHHHHhcccceecCCCCHHHHHHHHHHHH--HH------hhCHHHHHHHHHHHHHHH
Confidence 999876 888887743 244556677764 557773 11 335566777777776654
No 83
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.90 E-value=1.4e-22 Score=228.22 Aligned_cols=252 Identities=10% Similarity=0.079 Sum_probs=190.5
Q ss_pred CCCCeEEccCCCC-CCCCcHHHHHHHHHHHHccC-------CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNSGLIHMDVDQS-FLPIPSLVKAAIFESFARQN-------MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~~~IdLs~g~p-~~~~p~~v~~al~~al~~y~-------~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.+...+||+.|++ .+++++.+.+++.+.+..+. ..+|..+....+++.+++++|++ + .|++++| +++
T Consensus 37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~-~i~~~sG-t~a 111 (384)
T 1bs0_A 37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYS---R-ALLFISG-FAA 111 (384)
T ss_dssp TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCS---E-EEEESCH-HHH
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC---c-EEEeCCc-HHH
Confidence 4567899999986 55678889999988876532 12244455666777777777864 2 6888888 688
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCC--CcEEEEECCCCCCccc
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVK--KPWVYISGPTINPTGL 762 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~--~~~vil~~P~~NPTG~ 762 (903)
+..++.+++++||.|+++.|+|+.+...++..|++++.+|. .|++.+++.+++.. ++++++++|+ ||||.
T Consensus 112 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~-nptG~ 183 (384)
T 1bs0_A 112 NQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVF-SMDGD 183 (384)
T ss_dssp HHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBC-TTTCC
T ss_pred HHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCC-CCCCC
Confidence 88889999999999999999999999999999999999984 47899999887642 3588888897 99999
Q ss_pred CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 763 LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
+++ +++|.++|+++|++||+||+|+...++.... .....++. +..++++||||.++++| ||++
T Consensus 184 ~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~------~~~~~~~~-----~~di~~~s~sK~~~~~G---G~~~ 246 (384)
T 1bs0_A 184 SAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGR------GSCWLQKV-----KPELLVVTFGKGFGVSG---AAVL 246 (384)
T ss_dssp BCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGC------CHHHHTTC-----CCSEEEEESSSTTSSCC---EEEE
T ss_pred ccC---HHHHHHHHHHcCcEEEEECCcccceecCCCC------chHHhcCC-----CCcEEEeeccchhhccC---cEEE
Confidence 999 7899999999999999999997655532111 11122221 24599999999999777 9999
Q ss_pred eCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHhcccccchhHHH-HHHHHHHHHHHHHHHHh
Q 043334 843 LNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLGLRERKARDLMN-AVAEHIRNLESRSKRLK 902 (903)
Q Consensus 843 ~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~~~~~~~~~~~~-~l~~~r~~y~~Rr~~l~ 902 (903)
++++ +++.+..... ..+++.+.|.++.++|+. - .+ +.++.++.++++++.+.
T Consensus 247 ~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~--~-----~~~~~~~~~~~~~~~~~~l~ 303 (384)
T 1bs0_A 247 CSST-VADYLLQFARHLIYSTSMPPAQAQALRASLAV--I-----RSDEGDARREKLAALITRFR 303 (384)
T ss_dssp ECHH-HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH--H-----HSHHHHHHHHHHHHHHHHHH
T ss_pred eCHH-HHHHHHHhchhhhcCCCCCHHHHHHHHHHHHH--H-----hccccHHHHHHHHHHHHHHH
Confidence 9876 8888876532 336788888888888841 1 11 45566677777776654
No 84
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.90 E-value=5.9e-23 Score=231.77 Aligned_cols=242 Identities=13% Similarity=0.070 Sum_probs=189.8
Q ss_pred CCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCC
Q 043334 626 FLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGS 705 (903)
Q Consensus 626 ~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~ 705 (903)
+.++++.+.+++.+.+.. .......++++++++++++.+|.+. +.+|++|+|+++++..++.+++++||+|++++|+
T Consensus 42 ~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~g~~~--~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~ 118 (393)
T 1vjo_A 42 PSNAHPSVLQAMNVSPVG-HLDPAFLALMDEIQSLLRYVWQTEN--PLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAG 118 (393)
T ss_dssp CCCCCHHHHHHHSSCCCC-TTSHHHHHHHHHHHHHHHHHHTCCC--SCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred CCCCCHHHHHHHhccccc-ccCHHHHHHHHHHHHHHHHHhCCCC--CcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCC
Confidence 345678888877665432 1112245788999999999999842 2269999999999999999999999999999999
Q ss_pred cHH--HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcE
Q 043334 706 NGN--YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGAR 782 (903)
Q Consensus 706 y~~--~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~ 782 (903)
|.. +...++..|++++.++++. ++.+|+++|++.+++ ++ ++|++++|+ ||||.+++ +++|.++|+++|++
T Consensus 119 ~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~-~~v~~~~~~-nptG~~~~---l~~i~~l~~~~~~~ 191 (393)
T 1vjo_A 119 YFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRP-AILALVHAE-TSTGARQP---LEGVGELCREFGTL 191 (393)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCC-SEEEEESEE-TTTTEECC---CTTHHHHHHHHTCE
T ss_pred hhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCc-eEEEEeccC-CCcceecc---HHHHHHHHHHcCCE
Confidence 999 9999999999999999975 467999999999987 66 589999998 99999998 78999999999999
Q ss_pred EEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhC-------
Q 043334 783 VVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSF------- 855 (903)
Q Consensus 783 VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~------- 855 (903)
||+||+|+ |+..+. + +... +.+++++|+||.++.+| |+||++++++ +++.+...
T Consensus 192 li~Dea~~---~g~~~~---~-------~~~~----~~di~~~s~sK~l~~~~-~~G~l~~~~~-~~~~~~~~~~~~~~~ 252 (393)
T 1vjo_A 192 LLVDTVTS---LGGVPI---F-------LDAW----GVDLAYSCSQKGLGCSP-GASPFTMSSR-AIEKLQRRRTKVANW 252 (393)
T ss_dssp EEEECTTT---TTTSCC---C-------TTTT----TCSEEECCSSSTTCSCS-SCEEEEECHH-HHHHHHTCSSCCSCS
T ss_pred EEEECCcc---ccCcCC---c-------cccc----CccEEEEcCcccccCCC-ceEEEEECHH-HHHHHhccCCCCCce
Confidence 99999997 332211 1 1111 36899999999998888 9999999987 88888542
Q ss_pred --------------CCCC-CCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 856 --------------PGLS-KPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 856 --------------~~~~-~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
.... +++.+.|.++..+|+. . .+.+++++++.++++++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~--~----~~~~~~~~~~~~~~~~~~l~ 308 (393)
T 1vjo_A 253 YLDMNLLGKYWGSERVYHHTAPINLYYALREALRL--I----AQEGLANCWQRHQKNVEYLW 308 (393)
T ss_dssp TTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHH--H----HHHCHHHHHHHHHHHHHHHH
T ss_pred ecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHH--H----HHccHHHHHHHHHHHHHHHH
Confidence 1123 6788999999988841 1 12345667777777777664
No 85
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.90 E-value=1.9e-22 Score=227.71 Aligned_cols=255 Identities=13% Similarity=0.124 Sum_probs=190.7
Q ss_pred CCCCeEEccCCCCC-CCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNSGLIHMDVDQSF-LPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~~~IdLs~g~p~-~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.+.+.|||+.|++. +.+++.+.+++.+.+.++.. .+|..+..+.+++.+++++|.+ + .|++++|+ ++
T Consensus 41 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~-~---~i~~~sGt-~a 115 (399)
T 3tqx_A 41 GEKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTD-D---TILYSSCF-DA 115 (399)
T ss_dssp TTEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCS-E---EEEESCHH-HH
T ss_pred CCeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCC-c---EEEECchH-HH
Confidence 45678999999653 34688899999888876432 2455666777888888888864 2 68888885 57
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC-----CCcEEEEECCCCCC
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV-----KKPWVYISGPTINP 759 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-----~~~~vil~~P~~NP 759 (903)
+..++.+++++||.|+++.|+|+.+...++..|++++.++. +|++.+++.+++. ..++|++++|+ ||
T Consensus 116 ~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~-np 187 (399)
T 3tqx_A 116 NGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVF-SM 187 (399)
T ss_dssp HHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEE-TT
T ss_pred HHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCC-CC
Confidence 77888999999999999999999999999999999999986 3567787777651 33699999997 99
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
||.+++ +++|.++|+++|++||+||+|+...++.... +.....+-.. +++++++||||.++ |.+.|
T Consensus 188 tG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~------~~~~~~~~~~---~~di~~~s~sK~~~--g~~gG 253 (399)
T 3tqx_A 188 DGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGR------GTPEYCGVAD---RVDILTGTLGKALG--GASGG 253 (399)
T ss_dssp TTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSC------CHHHHHTCTT---CCSEEEEESSSSSC--SSCCE
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCC------chHHhhCCCC---CCcEEEecchHhcc--cCceE
Confidence 999999 8899999999999999999996333333321 1122221111 36799999999998 45559
Q ss_pred EEEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 840 FLVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 840 ~lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
|++++++ +++.+..... ...++...+.++..+++. ..++.+++++.++++++.+.
T Consensus 254 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~l~ 312 (399)
T 3tqx_A 254 YTSGHKE-IIEWLRNRSRPYLFSNTVAPVIVATSLKVLEL-------LKTEGPQLRKQLQENSRYFR 312 (399)
T ss_dssp EEEECHH-HHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHH-------HHHTHHHHHHHHHHHHHHHH
T ss_pred EEEcCHH-HHHHHHHhCcceeccCCCcHHHHHHHHHHHHH-------HhhccHHHHHHHHHHHHHHH
Confidence 9999987 8888887532 345667777777777731 11456677777777777664
No 86
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.90 E-value=1.5e-22 Score=230.86 Aligned_cols=221 Identities=12% Similarity=0.005 Sum_probs=174.8
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHH---c----cCCC-CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFA---R----QNMS-ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~---~----y~~~-~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..++++++|++++|+.+.+++.+.+. . |.+. .|. +..+.+++.+++++|.+ ++++++|+++++..+
T Consensus 20 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~-~~~~~l~~~ia~~~g~~-----~~i~~~~g~~ai~~~ 93 (404)
T 1e5e_A 20 DQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGN-PTVSNLEGKIAFLEKTE-----ACVATSSGMGAIAAT 93 (404)
T ss_dssp CTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCC-HHHHHHHHHHHHHHTCS-----EEEEESSHHHHHHHH
T ss_pred CCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcC-hHHHHHHHHHHHHhCCC-----cEEEeCChHHHHHHH
Confidence 45789999999988777666655543 1 2122 233 33445666666666653 466666667999999
Q ss_pred HHHhccCCCeEEEcCCCcHHHHH----HHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCC
Q 043334 689 VLCCILEGGTLCFPAGSNGNYVS----AARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLY 764 (903)
Q Consensus 689 l~~l~~pGD~Vlv~~P~y~~~~~----~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~ 764 (903)
+.+++++||.|++++|+|+.+.. .++..|++++.++++ |++++++.+++++ ++|++++|+ ||||.++
T Consensus 94 ~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t-~~v~l~~p~-NptG~v~ 164 (404)
T 1e5e_A 94 VLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNT-KIVYFETPA-NPTLKII 164 (404)
T ss_dssp HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTE-EEEEEESSC-TTTCCCC
T ss_pred HHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCC-cEEEEECCC-CCCCccc
Confidence 99999999999999999999988 788899999999874 5788999888766 599999998 9999999
Q ss_pred CHHHHHHHHHHHHh-CCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccccee-eEEE
Q 043334 765 SNKEIENILTVCAK-YGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLV 842 (903)
Q Consensus 765 s~eel~eI~~ia~k-~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv 842 (903)
+ +++|.++|++ +|++||+||+|..+.+. . + +. . +++++++|+||.|+++|+|+ ||++
T Consensus 165 ~---l~~i~~la~~~~~~~li~De~~~~~~~~--~-------~-~~----~----~~di~~~S~sK~~~~~g~ri~G~~~ 223 (404)
T 1e5e_A 165 D---MERVCKDAHSQEGVLVIADNTFCSPMIT--N-------P-VD----F----GVDVVVHSATKYINGHTDVVAGLIC 223 (404)
T ss_dssp C---HHHHHHHHHTSTTCEEEEECTTTCTTTC--C-------G-GG----G----TCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred C---HHHHHHHHHhhcCCEEEEECCCchhhhC--C-------c-cc----c----CCEEEEEcCccccCCCCCCeEEEEE
Confidence 7 8999999999 99999999999876553 1 1 11 1 36899999999999999998 9999
Q ss_pred eCcHHHHH-HHHhCCCC---CCCcHHHHHHHHHHHh
Q 043334 843 LNHPQLVD-AFSSFPGL---SKPHSTVRYAIKKLLG 874 (903)
Q Consensus 843 ~~~~~li~-~l~~~~~~---~~~s~~~Q~aa~~~L~ 874 (903)
++++ +++ .+...... .+++.+.|.++...|.
T Consensus 224 ~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~ 258 (404)
T 1e5e_A 224 GKAD-LLQQIRMVGIKDITGSVISPHDAWLITRGLS 258 (404)
T ss_dssp ECHH-HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHT
T ss_pred ECHH-HHHHHHHHHHHhCCCCCCCHHHHHHHHHhHh
Confidence 9988 777 88876653 3578889999888884
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.89 E-value=6.2e-22 Score=221.77 Aligned_cols=247 Identities=9% Similarity=0.060 Sum_probs=186.4
Q ss_pred EEccCCCCCCCCcHHHHHHHHHHHHc-cCCC-------CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 618 IHMDVDQSFLPIPSLVKAAIFESFAR-QNMS-------ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 618 IdLs~g~p~~~~p~~v~~al~~al~~-y~~~-------~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
+.|+.+.+. ++|+.+.+++.+.+.. |... ++..+..+.+++.+++++|.+.+ +|++|+|+++++..++
T Consensus 3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~ 78 (384)
T 1eg5_A 3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS---EIFFTSCATESINWIL 78 (384)
T ss_dssp EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG---GEEEESCHHHHHHHHH
T ss_pred EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC---eEEEECCHHHHHHHHH
Confidence 567777766 6788999999998865 2111 11223446677777777786543 8999999999999999
Q ss_pred HHhc----cCCCeEEEcCCCcHHHHHHH---HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCccc
Q 043334 690 LCCI----LEGGTLCFPAGSNGNYVSAA---RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGL 762 (903)
Q Consensus 690 ~~l~----~pGD~Vlv~~P~y~~~~~~~---~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~ 762 (903)
.+++ ++||+|+++.|+|+.+...+ +..|++++.+|++. ++.+|+++|++.+++++ ++|++++|+ ||||.
T Consensus 79 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~-~~v~~~~~~-nptG~ 154 (384)
T 1eg5_A 79 KTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDT-FLVSIMAAN-NEVGT 154 (384)
T ss_dssp HHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTE-EEEEEESBC-TTTCB
T ss_pred HhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCC-eEEEEECCC-CCccc
Confidence 9998 79999999999999887666 77899999999864 56799999999998765 589999998 99999
Q ss_pred CCCHHHHHHHHHHHHhCC--cEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 763 LYSNKEIENILTVCAKYG--ARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~--i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
+++ +++|.++|+++| ++||+||+|+ |+.... + +... +.++++.|+||.+|++| +||
T Consensus 155 ~~~---~~~i~~l~~~~~~~~~li~Dea~~---~~~~~~---~-------~~~~----~~di~~~s~sK~~g~~G--~G~ 212 (384)
T 1eg5_A 155 IQP---VEDVTRIVKKKNKETLVHVDAVQT---IGKIPF---S-------LEKL----EVDYASFSAHKFHGPKG--VGI 212 (384)
T ss_dssp BCC---HHHHHHHHHHHCTTCEEEEECTTT---TTTSCC---C-------CTTT----CCSEEEEEGGGGTSCTT--CEE
T ss_pred ccC---HHHHHHHHHhcCCceEEEEEhhhh---cCCccc---C-------chhc----CCCEEEecHHHhcCCCc--eEE
Confidence 999 688899999999 9999999996 332221 1 1111 25789999999999889 799
Q ss_pred EEeCcHHH--HHHHHhC-----CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 841 LVLNHPQL--VDAFSSF-----PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 841 lv~~~~~l--i~~l~~~-----~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++++ + ...+... ....+++.+.|.++..+|+ . +.++++++++.++++++.+.
T Consensus 213 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~--~-----~~~~~~~~~~~~~~~~~~l~ 273 (384)
T 1eg5_A 213 TYIRKG-VPIRPLIHGGGQERGLRSGTQNVPGIVGAARAME--I-----AVEELSEAAKHMEKLRSKLV 273 (384)
T ss_dssp EEECTT-SCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHH--H-----HHHTHHHHHHHHHHHHHHHH
T ss_pred EEEcCC-CccccccccCcccccccCCCCChHHHHHHHHHHH--H-----HHHhHHHHHHHHHHHHHHHH
Confidence 999987 4 2222111 0245678889999888884 1 12456667777777776654
No 88
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.89 E-value=4.9e-22 Score=222.98 Aligned_cols=239 Identities=11% Similarity=0.050 Sum_probs=183.6
Q ss_pred CCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcH
Q 043334 628 PIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNG 707 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~ 707 (903)
+.++.+.+++.+.+.. .......++++++++++++.+|.+ +++ ++++|+|+++++..++.+++++||+|++++|+|.
T Consensus 30 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~g~~-~~~-~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~ 106 (386)
T 2dr1_A 30 ACFPEVLEIMKVQMFS-HRSKEYRKVHMDTVERLREFLEVE-KGE-VLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAF 106 (386)
T ss_dssp CCCHHHHHHTTSCCCC-TTSHHHHHHHHHHHHHHHHHHTCS-SSE-EEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHH
T ss_pred CCcHHHHHHHhccccc-ccCHHHHHHHHHHHHHHHHHhCCC-CCc-EEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCch
Confidence 4567777776554322 111123678999999999999987 334 7999999999999999999999999999999999
Q ss_pred H--HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh--cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEE
Q 043334 708 N--YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE--TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARV 783 (903)
Q Consensus 708 ~--~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~--~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~V 783 (903)
. +...++..|++++.++++. ++.+|+++|++.++ +++ ++|++++|+ ||||.+++ +++|.++|+++|++|
T Consensus 107 ~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~-~~v~~~~~~-nptG~~~~---l~~i~~l~~~~~~~l 179 (386)
T 2dr1_A 107 GKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDV-EAVTITYNE-TSTGVLNP---LPELAKVAKEHDKLV 179 (386)
T ss_dssp HHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTC-CEEEEESEE-TTTTEECC---HHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCC-cEEEEEeec-CCcchhCC---HHHHHHHHHHcCCeE
Confidence 8 8899999999999999864 56799999999985 344 599999998 99999988 799999999999999
Q ss_pred EEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH----------
Q 043334 784 VIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS---------- 853 (903)
Q Consensus 784 I~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~---------- 853 (903)
|+||+|+...+. . + +... +.+++++|+||.++.++ ++||++++++ +++.+.
T Consensus 180 i~D~a~~~~~~~---~---~-------~~~~----~~di~~~s~sK~~~~~~-g~G~~~~~~~-~~~~~~~~~~~~~~~~ 240 (386)
T 2dr1_A 180 FVDAVSAMGGAD---I---K-------FDKW----GLDVVFSSSQKAFGVPP-GLAIGAFSER-FLEIAEKMPERGWYFD 240 (386)
T ss_dssp EEECTTTBTTBC---C---C-------TTTT----TCSEEEEETTSTTCCCS-SCEEEEECHH-HHHHHTTCTTCCSTTC
T ss_pred EEEccccccCcc---c---c-------cccc----CCcEEEEeccccccCCC-ceEEEEECHH-HHHHHhcCCCCceEEe
Confidence 999999754331 1 1 1111 36899999999998763 3999999987 877762
Q ss_pred ------h----CCCCCCCcHHHHHHHHHHHhcccccchhHHHH--HHHHHHHHHHHHHHHh
Q 043334 854 ------S----FPGLSKPHSTVRYAIKKLLGLRERKARDLMNA--VAEHIRNLESRSKRLK 902 (903)
Q Consensus 854 ------~----~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~--l~~~r~~y~~Rr~~l~ 902 (903)
. .....+++...|.++..+|+. +.++ ++++++.++++++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-------~~~~g~~~~~~~~~~~~~~~l~ 294 (386)
T 2dr1_A 241 IPLYVKYLKEKESTPSTPPMPQVFGINVALRI-------IEKMGGKEKWLEMYEKRAKMVR 294 (386)
T ss_dssp HHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHH-------HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH-------HHHhcCHHHHHHHHHHHHHHHH
Confidence 1 123556788899999888841 1122 4556666666666553
No 89
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.89 E-value=4.7e-22 Score=225.72 Aligned_cols=213 Identities=15% Similarity=0.175 Sum_probs=171.0
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccCC-----CCCc----hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQNM-----SESE----IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~-----~~G~----~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
++++|+|+.|.+. ++|+.+.+++.+.+..+.. ...+ .+..+.+++.+++++|.. +++ +|++|+|++++
T Consensus 26 g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~-~~~-~v~~~~g~t~a 102 (420)
T 1t3i_A 26 GHPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINAR-SPR-EIVYTRNATEA 102 (420)
T ss_dssp TEECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCS-CGG-GEEEESSHHHH
T ss_pred CCceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCC-CCC-eEEEcCChHHH
Confidence 3458999999998 7789999999988865321 1112 234566777777777873 233 89999999999
Q ss_pred HHHHHHHh----ccCCCeEEEcCCCcHH----HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCC
Q 043334 685 FNKLVLCC----ILEGGTLCFPAGSNGN----YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPT 756 (903)
Q Consensus 685 l~~ll~~l----~~pGD~Vlv~~P~y~~----~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~ 756 (903)
+..++.++ +++||+|+++.|+|+. +...++..|++++.++++ +++.+|++++++++++++ ++|++++|+
T Consensus 103 ~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~-~~v~~~~~~ 179 (420)
T 1t3i_A 103 INLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKT-KLVTVVHIS 179 (420)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTE-EEEEEESBC
T ss_pred HHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCc-eEEEEeCCc
Confidence 99999999 8999999999999998 677788899999999986 357799999999998765 589999998
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 757 INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 757 ~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
||||.+++ +++|.++|+++|++||+|++|+.... . .+ ...+ +.++++.|+||.+|.+|
T Consensus 180 -nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~---~---~~----~~~~-------~~di~~~s~sK~~~~~g- 237 (420)
T 1t3i_A 180 -NTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY---P---LD----VQLI-------DCDWLVASGHKMCAPTG- 237 (420)
T ss_dssp -TTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---C---CC----HHHH-------TCSEEEEEGGGTTSCTT-
T ss_pred -ccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc---c---Cc----hhhc-------CCCEEEEehhhhcCCCc-
Confidence 99999999 88999999999999999999964221 1 11 1111 25789999999998888
Q ss_pred eeeEEEeCcHHHHHHHHhCC
Q 043334 837 KFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~~~ 856 (903)
+||++++++ +++.+....
T Consensus 238 -~G~~~~~~~-~~~~~~~~~ 255 (420)
T 1t3i_A 238 -IGFLYGKEE-ILEAMPPFF 255 (420)
T ss_dssp -CEEEEECHH-HHHHSCCCS
T ss_pred -eEEEEEchH-HHhhcCcee
Confidence 999999977 888876653
No 90
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.89 E-value=1.5e-22 Score=226.14 Aligned_cols=212 Identities=13% Similarity=0.127 Sum_probs=163.8
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccC---------CCCCchHHHHHHHHH-HHhhcCCCCCCCCcEEecCchHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQN---------MSESEIDVTPSIQQY-IKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~---------~~~G~~~lr~ala~~-l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
+++++.|+.|.+..++++.+.+++.+.+.... ..++..+..+.+++. +++++|.+ +|++|+|+++
T Consensus 6 ~~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~-----~v~~~~g~t~ 80 (371)
T 2e7j_A 6 TKDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD-----VARVTNGARE 80 (371)
T ss_dssp --CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS-----EEEEESSHHH
T ss_pred CCCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC-----EEEEeCChHH
Confidence 56789999988777889999999888765421 112233344556666 66666764 6999999999
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEec--CCCCCCcccCHHHHHHHhh-----cCCCcEEEEECCC
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIP--TESEVGFKMTEKTLVTILE-----TVKKPWVYISGPT 756 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~--~~~~~~f~ld~~~L~~~l~-----~~~~~~vil~~P~ 756 (903)
++..++.+++++||+|++++|+|+.+...++..|++++.++ .++ ++.+|++++++.++ +++ +++++++|+
T Consensus 81 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~~~~-~~v~~~~~~ 157 (371)
T 2e7j_A 81 AKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYP--DYAITPENFAQTIEETKKRGEV-VLALITYPD 157 (371)
T ss_dssp HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTT--TCCCCHHHHHHHHHHHTTTSCE-EEEEEESSC
T ss_pred HHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCC--CCCcCHHHHHHHHHhhcccCCe-EEEEEECCC
Confidence 99999999999999999999999999999999999999999 653 47799999999987 444 589999997
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 757 INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 757 ~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
||||.+++ +++|.++|+++|++||+||+|+...+. .+ ...+ +..++++|+||.++.+ .
T Consensus 158 -nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~------~~----~~~~-------~~di~~~s~sK~~~~~-~ 215 (371)
T 2e7j_A 158 -GNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP------VS----LKEI-------GADFIVGSGHKSMAAS-G 215 (371)
T ss_dssp -TTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC------CC----HHHH-------TCSEEEEEHHHHSSCC-S
T ss_pred -CCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC------CC----hhhc-------CCCEEEecCCcCCCCC-C
Confidence 99999999 689999999999999999999753321 11 1111 2458999999999854 5
Q ss_pred eeeEEEeCcHHHHHH-HHhCC
Q 043334 837 KFGFLVLNHPQLVDA-FSSFP 856 (903)
Q Consensus 837 RiG~lv~~~~~li~~-l~~~~ 856 (903)
|+||++++++ +++. +....
T Consensus 216 ~~G~~~~~~~-~~~~~~~~~~ 235 (371)
T 2e7j_A 216 PIGVMGMKEE-WAEIVLRRSE 235 (371)
T ss_dssp SCEEEEECTT-TTTTTTCBCS
T ss_pred CcEEEEEech-hhhhhccccc
Confidence 9999999987 7776 66544
No 91
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.88 E-value=7e-22 Score=224.88 Aligned_cols=253 Identities=12% Similarity=0.109 Sum_probs=188.6
Q ss_pred CCCCeEEccCCCC-CCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNSGLIHMDVDQS-FLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~~~IdLs~g~p-~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.|...+||+.+++ .++.++.+.+++.+.+.+|.. ..|..++++++++++++++|.+. .+++++|+ ++
T Consensus 57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~----~i~~~sGt-~a 131 (409)
T 3kki_A 57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDE----CLLSQSGW-NA 131 (409)
T ss_dssp CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSE----EEEESCHH-HH
T ss_pred CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCe----EEEecchH-HH
Confidence 4667899977653 255788999999999887532 23555667778888888888652 47777775 88
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCC
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLY 764 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~ 764 (903)
+..++.+++++||.|+++.|+|+.+...++..|++++.++. +|++++++.+++...++|++++|+ ||||.++
T Consensus 132 ~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~-nptG~~~ 203 (409)
T 3kki_A 132 NVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIY-STLGTIA 203 (409)
T ss_dssp HHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBC-TTTCCBC
T ss_pred HHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCC-CCCCCcC
Confidence 88889999999999999999999999999999999998875 579999999986433699999997 9999999
Q ss_pred CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 765 SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 765 s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+ +++|.++|+++|++||+||+|+...|+.... ......+..+ +..|++.||||+++++| ||++++
T Consensus 204 ~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~------~~~~~~~~~~---~~di~~~s~sK~~~~~g---g~v~~~ 268 (409)
T 3kki_A 204 P---LAELVNISKEFGCALLVDESHSLGTHGPNGA------GLLAELGLTR---EVHFMTASLAKTFAYRA---GAIWCN 268 (409)
T ss_dssp C---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGC------CHHHHHTCGG---GCSEEEEESSSTTCSSC---EEEEES
T ss_pred C---HHHHHHHHHHcCCEEEEECCccccccCCCCC------cchhhcCCCC---CCCEEEeecchhhCCCc---eEEEEC
Confidence 9 8899999999999999999998765643321 1111111111 35699999999998765 999999
Q ss_pred cHHHHHHHHhCCC----CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 845 HPQLVDAFSSFPG----LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 845 ~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++ +++.+..... ....+...+.++.++++. + +...++++.++++++++.
T Consensus 269 ~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~-------~-~~~~~~~~~~~~~~~~l~ 321 (409)
T 3kki_A 269 NE-VNRCVPFISYPAIFSSTLLPYEAAGLETTLEI-------I-ESADNRRQHLDRMARKLR 321 (409)
T ss_dssp SS-GGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHH-------H-HHCHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHhCcCccccCCCcHHHHHHHHHHHHH-------H-hcCHHHHHHHHHHHHHHH
Confidence 87 7777766432 333555666666666731 1 112456666777766654
No 92
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.88 E-value=2.7e-21 Score=218.91 Aligned_cols=229 Identities=15% Similarity=0.155 Sum_probs=176.8
Q ss_pred CCCCeEEccCCCCCCC--CcHHHHHHHHHHHHccCCCC-------CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 613 PNSGLIHMDVDQSFLP--IPSLVKAAIFESFARQNMSE-------SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~--~p~~v~~al~~al~~y~~~~-------G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
.+...|||+.|.+ ++ +++.+.+++.+.+..+.... |..+....+++.+++++|.+ + .|++++|+.
T Consensus 43 ~g~~~id~~~~~~-~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~---~i~~~sGs~- 116 (401)
T 1fc4_A 43 DGSHVINFCANNY-LGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME-D---AILYSSCFD- 116 (401)
T ss_dssp TSCEEEECCCSCT-TSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS-E---EEEESCHHH-
T ss_pred CCccEEEeeccCc-ccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC-c---EEEeCChHH-
Confidence 5678999999954 54 58899999998887654321 11344556666666777775 3 788888855
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc------CCCcEEEEECCCC
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET------VKKPWVYISGPTI 757 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~------~~~~~vil~~P~~ 757 (903)
++..++.+++++||.|+++.|+|+.+...++..|++++.++. .|++.+++.+++ ++ ++|++++|+
T Consensus 117 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~-~~v~~~~~~- 187 (401)
T 1fc4_A 117 ANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARH-VLIATDGVF- 187 (401)
T ss_dssp HHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSS-EEEEEESEE-
T ss_pred HHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCc-eEEEEeCCc-
Confidence 677788889999999999999999998899999999999974 478889888865 44 589999997
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCcEEEEecCCC-CCcc-CCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccc
Q 043334 758 NPTGLLYSNKEIENILTVCAKYGARVVIDTAFS-GLEF-NYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTG 834 (903)
Q Consensus 758 NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~-~l~f-~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~ 834 (903)
||||.+++ +++|.++|+++|++||+||+|+ ++.+ ++... ...++-.+ +.+++++||||.+ +++
T Consensus 188 nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~--------~~~~~~~~---~~di~~~s~sK~~~~~~ 253 (401)
T 1fc4_A 188 SMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGS--------HEYCDVMG---RVDIITGTLGKALGGAS 253 (401)
T ss_dssp TTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCH--------HHHTTCTT---CCSEEEEESSSTTCSSS
T ss_pred CCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcc--------HHHcCCCc---CCcEEEecchhhccCCC
Confidence 99999999 8999999999999999999995 6654 33321 11111111 3679999999999 666
Q ss_pred cceeeEEEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 835 ALKFGFLVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 835 GlRiG~lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
| ||++++++ +++.+..... ..+++.+.|.++..+|+
T Consensus 254 g---G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 293 (401)
T 1fc4_A 254 G---GYTAARKE-VVEWLRQRSRPYLFSNSLAPAIVAASIKVLE 293 (401)
T ss_dssp C---EEEEECHH-HHHHHHHHCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred C---EEEEcCHH-HHHHHHHhCcCceeCCCCCHHHHHHHHHHHH
Confidence 5 99999876 8888877542 45788899999988884
No 93
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.88 E-value=9.9e-22 Score=223.21 Aligned_cols=221 Identities=13% Similarity=0.053 Sum_probs=175.1
Q ss_pred EEccCCCCCCCCcHHHHHHHHHHHH-------ccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 618 IHMDVDQSFLPIPSLVKAAIFESFA-------RQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 618 IdLs~g~p~~~~p~~v~~al~~al~-------~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
..+++++|++..++.+.+++.+++. .|.+..+..+..+++++++++.+|.+ + .|++++|+ +++..++.
T Consensus 23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~---~i~~~sG~-~a~~~~l~ 97 (398)
T 2rfv_A 23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGE-A---GLATASGI-SAITTTLL 97 (398)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCS-E---EEEESSHH-HHHHHHHH
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCC-c---EEEECCHH-HHHHHHHH
Confidence 3688999998876665555554443 23333445677888999999988875 2 57777766 99999999
Q ss_pred HhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCH
Q 043334 691 CCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSN 766 (903)
Q Consensus 691 ~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ 766 (903)
+++++||.|+++.|+|+.+...+ +..|++++.++++ |++++++.+++++ ++|++++|+ ||||.+++
T Consensus 98 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~-~~v~~~~~~-nptG~~~~- 167 (398)
T 2rfv_A 98 TLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPET-KVVYIETPA-NPTLSLVD- 167 (398)
T ss_dssp HHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTE-EEEEEESSB-TTTTBCCC-
T ss_pred HHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCC-eEEEEECCC-CCCCcccC-
Confidence 99999999999999999988876 8889999999873 7899999998766 599999998 99999998
Q ss_pred HHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccccee-eEEEeCc
Q 043334 767 KEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNH 845 (903)
Q Consensus 767 eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~ 845 (903)
+++|.++|+++|+++|+||+|+...+.. . .. . +.++++.|+||.++++|+|+ ||+++++
T Consensus 168 --l~~i~~l~~~~~~~li~De~~~~~~~~~-~---------~~----~----~~di~~~s~sK~~~~~g~~~~G~~~~~~ 227 (398)
T 2rfv_A 168 --IETVAGIAHQQGALLVVDNTFMSPYCQQ-P---------LQ----L----GADIVVHSVTKYINGHGDVIGGIIVGKQ 227 (398)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTTCTTTCC-G---------GG----G----TCSEEEEETTTTTTCSSCCCCEEEEECH
T ss_pred --HHHHHHHHHHcCCEEEEECCCcccccCC-c---------hh----h----CCcEEEEeCcccccCCCCceEEEEEECH
Confidence 8999999999999999999997654421 1 11 1 26799999999999999999 9999998
Q ss_pred HHHHH-HHHhCCC---CCCCcHHHHHHHHHHHh
Q 043334 846 PQLVD-AFSSFPG---LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 846 ~~li~-~l~~~~~---~~~~s~~~Q~aa~~~L~ 874 (903)
+ +++ .+..... ..+.+.+.|.++..+|+
T Consensus 228 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (398)
T 2rfv_A 228 E-FIDQARFVGLKDITGGCMSPFNAWLTLRGVK 259 (398)
T ss_dssp H-HHHHHHHTHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred H-HHHHHHHHHHHhCCCCCCCHHHHHHHHhhhh
Confidence 7 666 5554332 34677888999888884
No 94
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.88 E-value=2.5e-21 Score=222.03 Aligned_cols=233 Identities=18% Similarity=0.142 Sum_probs=180.1
Q ss_pred CCCCeEEccCCCC-CCCCcHHHHHHHHHHHHccC-------CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNSGLIHMDVDQS-FLPIPSLVKAAIFESFARQN-------MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~~~IdLs~g~p-~~~~p~~v~~al~~al~~y~-------~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.|.+.|||+.|++ .+.+++.+.+++.+.+.++. ...|..+....+++.+++++|.+ + .+++++|+. +
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~---~-~i~~~sGs~-a 136 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT---G-AIVFSTGYM-A 136 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS---E-EEEESCHHH-H
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC---c-eEEecCcHH-H
Confidence 4567899999975 44578889999998887643 23455567778888888888864 2 677777765 6
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC---CCcEEEEECCCCCCcc
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV---KKPWVYISGPTINPTG 761 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~---~~~~vil~~P~~NPTG 761 (903)
+..++.+++++||.|+++.|+|+.+...++..|++++.++. .|++.|++.+++. ..++|++++|+ ||||
T Consensus 137 ~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~~-n~tG 208 (427)
T 2w8t_A 137 NLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGVY-SMLG 208 (427)
T ss_dssp HHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESEE-TTTT
T ss_pred HHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCCC-CCCC
Confidence 66678889999999999999999999999999999999874 5899999998762 33589999997 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEE
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFL 841 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~l 841 (903)
.+++ +++|.++|+++|+++|+||+|+.+.++.... +....++-.+ +.+++++||||.+|++| ||+
T Consensus 209 ~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~------~~~~~~~~~~---~~di~~~s~sK~~g~~g---G~v 273 (427)
T 2w8t_A 209 DIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGR------GVYEAQGLEG---QIDFVVGTFSKSVGTVG---GFV 273 (427)
T ss_dssp EECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSC------CHHHHTTCTT---CCSEEEEESSSTTCSCC---EEE
T ss_pred CccC---HHHHHHHHHHcCCEEEEECCccccccCCCCC------chHhhcCCCc---CCcEEEecchhhhccCC---CEE
Confidence 9998 8899999999999999999999877764332 1122122111 46899999999998777 999
Q ss_pred EeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 842 VLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 842 v~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
+++++ +++.+..... ..+.+...+.++..+|+
T Consensus 274 ~~~~~-l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~ 309 (427)
T 2w8t_A 274 VSNHP-KFEAVRLACRPYIFTASLPPSVVATATTSIR 309 (427)
T ss_dssp EECCT-TGGGGGGTCHHHHSSCCCCHHHHHHHHHHHH
T ss_pred EeCHH-HHHHHHHhcccccccCCCCHHHHHHHHHHHH
Confidence 99887 8887776531 34556666666667774
No 95
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.88 E-value=2.6e-21 Score=218.36 Aligned_cols=213 Identities=14% Similarity=0.140 Sum_probs=169.2
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccC--CCC-------CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQN--MSE-------SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~--~~~-------G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
|++++.|+.+.+. +.|+.+.+++.+.+..+. +.. +..+..+.+++.+++++|.+ +++ +|++|+|++++
T Consensus 21 g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~~~-~v~~~~g~t~a 97 (406)
T 1kmj_A 21 GLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-SAE-ELVFVRGTTEG 97 (406)
T ss_dssp TEECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCS-CGG-GEEEESSHHHH
T ss_pred CCceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCC-CCC-eEEEeCChhHH
Confidence 4568999999988 577889999988887532 111 12344567777788888873 233 89999999999
Q ss_pred HHHHHHHh----ccCCCeEEEcCCCcHH----HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCC
Q 043334 685 FNKLVLCC----ILEGGTLCFPAGSNGN----YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPT 756 (903)
Q Consensus 685 l~~ll~~l----~~pGD~Vlv~~P~y~~----~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~ 756 (903)
+..++.++ +++||+|+++.|+|.+ +...++..|++++.++++. ++.+|++++++.+++++ ++|++++|+
T Consensus 98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~-~~v~~~~~~ 174 (406)
T 1kmj_A 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKT-RLLAITHVS 174 (406)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTE-EEEEEESBC
T ss_pred HHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCC-eEEEEeCCC
Confidence 99999999 8999999999999764 4566788899999999864 56799999999998765 589999998
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 757 INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 757 ~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
||||.+++ +++|.++|+++|++||+||+|+.... . .+ +. .. +.+++++|+||.+|++|
T Consensus 175 -nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~---~---~~----~~---~~----~~d~~~~s~~K~~g~~G- 232 (406)
T 1kmj_A 175 -NVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH---P---VD----VQ---AL----DCDFYVFSGHKLYGPTG- 232 (406)
T ss_dssp -TTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---C---CC----HH---HH----TCSEEEEEGGGTTSCTT-
T ss_pred -ccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC---C---Cc----cc---cc----CCCEEEEEchhccCCCC-
Confidence 99999999 88999999999999999999964211 1 11 11 11 26789999999999888
Q ss_pred eeeEEEeCcHHHHHHHHhCC
Q 043334 837 KFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~~~ 856 (903)
+||++++++ +++.+....
T Consensus 233 -~G~~~~~~~-~~~~~~~~~ 250 (406)
T 1kmj_A 233 -IGILYVKEA-LLQEMPPWE 250 (406)
T ss_dssp -CEEEEECHH-HHHHCCCSS
T ss_pred -cEEEEEeHH-HHhhcCCcc
Confidence 899999876 888876543
No 96
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.88 E-value=6.3e-22 Score=225.59 Aligned_cols=253 Identities=11% Similarity=0.026 Sum_probs=189.5
Q ss_pred CCCCCeEEccCCCCCCCCcHHHHHHHHHHHH--c-cCCC--------CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCc
Q 043334 612 TPNSGLIHMDVDQSFLPIPSLVKAAIFESFA--R-QNMS--------ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADC 680 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~~p~~v~~al~~al~--~-y~~~--------~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~G 680 (903)
..+++.|.|+.+.+. ++|+.+.+++.+.+. . +... ++..+..+.+++++++.+|.+.+ +|++|+|
T Consensus 18 ~~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---~v~~~~g 93 (423)
T 3lvm_A 18 RAMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR---EIVFTSG 93 (423)
T ss_dssp --CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG---GEEEESS
T ss_pred cccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC---eEEEeCC
Confidence 467789999988876 678889998888765 2 2211 12235567888889988888644 8999999
Q ss_pred hHHHHHHHHHHhcc----CCCeEEEcCCCcHHHHHHH---HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEE
Q 043334 681 SQSLFNKLVLCCIL----EGGTLCFPAGSNGNYVSAA---RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYIS 753 (903)
Q Consensus 681 s~~al~~ll~~l~~----pGD~Vlv~~P~y~~~~~~~---~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~ 753 (903)
+++++..++.++++ +||.|+++.|+|+.+...+ +..|++++.++++. ++.+|++++++++++++ ++++++
T Consensus 94 gt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~-~~v~~~ 170 (423)
T 3lvm_A 94 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDT-ILVSIM 170 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTE-EEEECC
T ss_pred hHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCCCc-EEEEEe
Confidence 99999999998885 8999999999999998877 44599999999875 56789999999998766 588899
Q ss_pred CCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccc
Q 043334 754 GPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLT 833 (903)
Q Consensus 754 ~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~ 833 (903)
+|+ ||||.+++ +++|.++|+++|++||+||+|+...+ . .+ +... +..+++.|+||.+|.
T Consensus 171 ~~~-nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~---~---~~-------~~~~----~~di~~~s~sK~~g~ 229 (423)
T 3lvm_A 171 HVN-NEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL---P---ID-------LSQL----KVDLMSFSGHKIYGP 229 (423)
T ss_dssp SBC-TTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS---C---CC-------TTTS----CCSEEEEESTTTTSC
T ss_pred CCC-CCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC---C---cC-------hhhc----CCCEEEechHHhcCC
Confidence 997 99999999 78899999999999999999864211 1 00 1111 357899999999887
Q ss_pred ccceeeEEEeCcHHHHHHHHhCC---------CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 834 GALKFGFLVLNHPQLVDAFSSFP---------GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 834 ~GlRiG~lv~~~~~li~~l~~~~---------~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+| +||++++++ +++.+.... ....++...+.++..++.. +.++++++++.++++++.+.
T Consensus 230 ~g--~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~~l~ 297 (423)
T 3lvm_A 230 KG--IGALYVRRK-PRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI-------AKEEMATEMERLRGLRNRLW 297 (423)
T ss_dssp SS--CEEEEECBT-TBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
T ss_pred CC--eEEEEEecc-ccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 77 899999976 555554432 1344566667666666631 22345666677777766653
No 97
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.87 E-value=2.3e-22 Score=223.11 Aligned_cols=220 Identities=13% Similarity=0.076 Sum_probs=172.8
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC 692 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l 692 (903)
..+.+|+|+.+.+. ++++.+.+++.+.+..|....|..++++++++++++.+|.+.+ +|++|+|+++++..++.++
T Consensus 11 ~~p~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~---~v~~~~g~t~a~~~~~~~~ 86 (359)
T 1svv_A 11 AKPKPYSFVNDYSV-GMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDA---DVHFISGGTQTNLIACSLA 86 (359)
T ss_dssp ----CEECSCSCSS-CCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTS---EEEEESCHHHHHHHHHHHH
T ss_pred CCCeeEEecCCCcC-CCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCc---cEEEeCCchHHHHHHHHHH
Confidence 44568999997776 6788999999998877777788899999999999999996543 8999999999999999999
Q ss_pred ccCCCeEEEcCCCcHHHHH--HHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCC------CcEEEEECCCCCCcccCC
Q 043334 693 ILEGGTLCFPAGSNGNYVS--AARFLKANIVNIPTESEVGFKMTEKTLVTILETVK------KPWVYISGPTINPTGLLY 764 (903)
Q Consensus 693 ~~pGD~Vlv~~P~y~~~~~--~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~------~~~vil~~P~~NPTG~v~ 764 (903)
+++||.|++++|+|+.+.. .++..|++++.+|++ ++.+|++++++.++++. .++|++++| ||||.++
T Consensus 87 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~--~ptG~~~ 161 (359)
T 1svv_A 87 LRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT--TEVGTQY 161 (359)
T ss_dssp CCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS--CTTSCCC
T ss_pred hCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC--CCCceec
Confidence 9999999999999999988 488899999999974 57799999999998751 358888887 6899999
Q ss_pred CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 765 SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 765 s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+.+++++|.++|+++|++||+||+|.++.+...+. .. ..+. +.. ...++..|.+|..+ ...+|+++++
T Consensus 162 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~---~~-~~~~-~~~-----~~d~~~~s~~K~g~--~~~~g~l~~~ 229 (359)
T 1svv_A 162 TKQELEDISASCKEHGLYLFLDGARLASALSSPVN---DL-TLAD-IAR-----LTDMFYIGATKAGG--MFGEALIILN 229 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC---CC-CHHH-HHH-----HCSEEEEECTTTTC--SSCEEEEECS
T ss_pred CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc---ch-hhhh-hhh-----cCCEEEEecccCCC--CCceEEEEEc
Confidence 99999999999999999999999993332222111 00 0111 001 12467888999643 3557999988
Q ss_pred cHHHHHHHHh
Q 043334 845 HPQLVDAFSS 854 (903)
Q Consensus 845 ~~~li~~l~~ 854 (903)
++ +++.+..
T Consensus 230 ~~-~~~~~~~ 238 (359)
T 1svv_A 230 DA-LKPNARH 238 (359)
T ss_dssp GG-GCTTHHH
T ss_pred cc-HHHHHHH
Confidence 76 7666654
No 98
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.87 E-value=7.8e-21 Score=215.32 Aligned_cols=252 Identities=10% Similarity=0.053 Sum_probs=179.7
Q ss_pred CCCeEEccCCCC-CCCCcHHHHHHHHHHHHccCC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 614 NSGLIHMDVDQS-FLPIPSLVKAAIFESFARQNM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 614 ~~~~IdLs~g~p-~~~~p~~v~~al~~al~~y~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
|.+.+++..+++ .+++++.+.+++.+.+..+.. .+|..+..+.+++.+++++|.+ + +|++|+|++ +.
T Consensus 45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~---~-~i~~~sG~~-a~ 119 (401)
T 2bwn_A 45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKE---A-ALVFSSAYN-AN 119 (401)
T ss_dssp EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCS---E-EEEESCHHH-HH
T ss_pred CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCC---c-EEEECCcHH-HH
Confidence 456788887765 455667899999988876321 2344455566677777777752 3 799999988 55
Q ss_pred HHHHHHhc--cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh----cCCCcEEEEECCCCCC
Q 043334 686 NKLVLCCI--LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE----TVKKPWVYISGPTINP 759 (903)
Q Consensus 686 ~~ll~~l~--~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~----~~~~~~vil~~P~~NP 759 (903)
..++..++ .+||.|+++.|+|+.+...++..|++++.++.+ |++.+++.++ +++ ++|++++|+ ||
T Consensus 120 ~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~-~~v~~~~~~-np 190 (401)
T 2bwn_A 120 DATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAP-KLIAFESVY-SM 190 (401)
T ss_dssp HHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSC-EEEEEESBC-TT
T ss_pred HHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCc-eEEEEecCc-CC
Confidence 55555543 589999999999999999999999999999873 5788888876 344 589999998 99
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
||.+++ +++|.++|+++|++||+||+|+...|+.... ......+-. ...+++++||||++|++| |
T Consensus 191 tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~------~~~~~~~~~---~~~~i~~~s~sK~~~~~G---G 255 (401)
T 2bwn_A 191 DGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGA------GVAERDGLM---HRIDIFNGTLAKAYGVFG---G 255 (401)
T ss_dssp TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSC------CHHHHHTCG---GGCSEEEEESSSTTCSCC---E
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCc------eeeeccCcc---ccCcEEEeechhhccCCC---C
Confidence 999999 7899999999999999999998666654331 111111110 124799999999999888 9
Q ss_pred EEEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 840 FLVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 840 ~lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
|++++++ +++.+..... ..+.+...|.++..+++.... ..+.++++.++++++.+
T Consensus 256 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~------~~~~~~~~~~~~~~~~l 314 (401)
T 2bwn_A 256 YIAASAR-MVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKT------AEGQKLRDAQQMHAKVL 314 (401)
T ss_dssp EEEECHH-HHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTS------HHHHHHHHHHHHHHHHH
T ss_pred EEecCHH-HHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHh------cccHHHHHHHHHHHHHH
Confidence 9999876 8888775432 233455778777777742111 11244455555555544
No 99
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.87 E-value=1.3e-21 Score=223.30 Aligned_cols=267 Identities=9% Similarity=0.047 Sum_probs=187.7
Q ss_pred CCCCCeEEccCCCC--CCC-CcHHHHHHHHHHHHccCC---CCCchHHHHHHHHHHHhhc-CCCCCCCCcEEecCchHHH
Q 043334 612 TPNSGLIHMDVDQS--FLP-IPSLVKAAIFESFARQNM---SESEIDVTPSIQQYIKSNF-GFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~-~p~~v~~al~~al~~y~~---~~G~~~lr~ala~~l~~~~-G~~~~pe~~I~vt~Gs~~a 684 (903)
..+...+|++.|.+ +++ +++.+.+++.+.+..+.. .++..+....+++.+++++ | + .++ +|++|+|++++
T Consensus 38 ~~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~-~~~-~v~~~~g~~~a 114 (426)
T 1sff_A 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPG-D-FAK-KTLLVTTGSEA 114 (426)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSC-S-SCE-EEEEESSHHHH
T ss_pred CCCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCc-c-ccc-EEEEeCchHHH
Confidence 35667899987764 333 678899999888765322 1233344455555566655 4 2 224 89999999999
Q ss_pred HHHHHH---HhccCCCeEEEcCCCcHHHH-HHHHHcCCE-------------EEEecCCC---CCCcccCHHHHHHHhhc
Q 043334 685 FNKLVL---CCILEGGTLCFPAGSNGNYV-SAARFLKAN-------------IVNIPTES---EVGFKMTEKTLVTILET 744 (903)
Q Consensus 685 l~~ll~---~l~~pGD~Vlv~~P~y~~~~-~~~~~~G~~-------------vv~v~~~~---~~~f~ld~~~L~~~l~~ 744 (903)
+..++. .++++| .|++++|+|..+. ..+...|.+ ++.++++. ..++.+|+++|++.++.
T Consensus 115 ~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~ 193 (426)
T 1sff_A 115 VENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN 193 (426)
T ss_dssp HHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHh
Confidence 999988 677776 8999999997654 456666653 77777753 12355789999998863
Q ss_pred C---CCcEEEEECCC-CCCcc-cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCC
Q 043334 745 V---KKPWVYISGPT-INPTG-LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSF 819 (903)
Q Consensus 745 ~---~~~~vil~~P~-~NPTG-~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~ 819 (903)
. .+..+++++|+ +| || .++|.+++++|.++|+++|++||+||+|.++.+.+... . +...+
T Consensus 194 ~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~---~----~~~~~------- 258 (426)
T 1sff_A 194 DAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF---A----MEQMG------- 258 (426)
T ss_dssp TCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---G----GGGTT-------
T ss_pred ccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh---h----hhhcC-------
Confidence 1 12245666665 57 99 88999999999999999999999999999776655321 1 11111
Q ss_pred ceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHH
Q 043334 820 NVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESR 897 (903)
Q Consensus 820 ~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~R 897 (903)
..+.+.||||.++. |+|+||++++++ +++.+.... ...+.+.+.|.++.++|+.-.. +.+.+++.++++.++++
T Consensus 259 ~~~di~s~sK~~~~-GlriG~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~ 334 (426)
T 1sff_A 259 VAPDLTTFAKSIAG-GFPLAGVTGRAE-VMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ--ENLLQKANDLGQKLKDG 334 (426)
T ss_dssp SCCSEEEECGGGGT-SSCCEEEEEEHH-HHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcccccC-CCceEEEEEcHH-HHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHH
Confidence 12234599999996 999999999987 888776432 3667889999999977742111 23567777888888777
Q ss_pred HHHH
Q 043334 898 SKRL 901 (903)
Q Consensus 898 r~~l 901 (903)
.+.+
T Consensus 335 l~~~ 338 (426)
T 1sff_A 335 LLAI 338 (426)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 100
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.87 E-value=1.7e-21 Score=218.96 Aligned_cols=255 Identities=14% Similarity=0.113 Sum_probs=184.4
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHccC---CC--CCch---HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQN---MS--ESEI---DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y~---~~--~G~~---~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
++.++|+.+.+. +.|+.+.+++.+.+.... .. ..++ +..+.+++.+++++|.+.+ +|++|+|+++++.
T Consensus 15 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~ 90 (390)
T 1elu_A 15 ANKTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPN---TITITDNVTTGCD 90 (390)
T ss_dssp TTSEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGG---GEEEESSHHHHHH
T ss_pred CCeEEecCCccC-CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHH---HEEEeCChHHHHH
Confidence 357899988743 567789999888775421 11 0122 3456677777777786543 8999999999999
Q ss_pred HHHHHh-ccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcc
Q 043334 687 KLVLCC-ILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTG 761 (903)
Q Consensus 687 ~ll~~l-~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG 761 (903)
.++.++ +++||+|+++.|+|..+... ++..|++++.++++.++++.+|++.+++.+++++ ++|++++|+ ||||
T Consensus 91 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~v~~~~~~-nptG 168 (390)
T 1elu_A 91 IVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKT-RLVILSHLL-WNTG 168 (390)
T ss_dssp HHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTE-EEEEEESBC-TTTC
T ss_pred HHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCc-eEEEEeccc-cCCc
Confidence 999999 89999999999999997654 5678999999998643567899999999988665 589999998 9999
Q ss_pred cCCCHHHHHHHHHHHH----hCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce
Q 043334 762 LLYSNKEIENILTVCA----KYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK 837 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~----k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR 837 (903)
.+++ +++|.++|+ ++|++||+||+|+. .... .+ +... +.+++++|+||.+ ++|.+
T Consensus 169 ~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~---g~~~---~~-------~~~~----~~d~~~~s~~K~~-~~~~g 227 (390)
T 1elu_A 169 QVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSA---GSLP---LD-------FSRL----EVDYYAFTGHKWF-AGPAG 227 (390)
T ss_dssp CBCC---HHHHHHHHHHCCSSSCCEEEEECTTTB---TTBC---CC-------TTTS----CCSEEEEESSSTT-CCCTT
T ss_pred eecC---HHHHHHHHhhhhhhcCcEEEEEccccc---CCcC---CC-------hhhc----CCCEEEccccccc-cCCCc
Confidence 9999 788889999 99999999999962 2111 11 1111 3678999999933 35677
Q ss_pred eeEEEeCcHHHHHHHHhCC------------------------CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHH
Q 043334 838 FGFLVLNHPQLVDAFSSFP------------------------GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRN 893 (903)
Q Consensus 838 iG~lv~~~~~li~~l~~~~------------------------~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~ 893 (903)
+||++++++ +++.+.... ....++...|.++..++..-.. ..+++++++.
T Consensus 228 ~G~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~-----~~~~~~~~~~ 301 (390)
T 1elu_A 228 VGGLYIHGD-CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQR-----QGTAEERYQA 301 (390)
T ss_dssp CEEEEECTT-TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHH-----HCCHHHHHHH
T ss_pred eEEEEECHH-hHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHH-----cCCHHHHHHH
Confidence 999999987 777665421 1234566777766666631111 1135556666
Q ss_pred HHHHHHHHh
Q 043334 894 LESRSKRLK 902 (903)
Q Consensus 894 y~~Rr~~l~ 902 (903)
++++++.+.
T Consensus 302 ~~~~~~~l~ 310 (390)
T 1elu_A 302 ICQRSEFLW 310 (390)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666553
No 101
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.87 E-value=4e-21 Score=217.72 Aligned_cols=255 Identities=9% Similarity=0.042 Sum_probs=186.2
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccC--CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQN--MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~--~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..+...+|++.|. +.++ .++.+.+++.+.+.++. ......+..+++++++++.+|.+ +|++|+|+++++.
T Consensus 36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~v~~~~gg~~a~~ 110 (406)
T 4adb_A 36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFAD-----RVFFCNSGAEANE 110 (406)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSCS-----EEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCCC-----eEEEeCcHHHHHH
Confidence 4567789998772 3333 57889999999886632 12223456888999999987642 7999999999999
Q ss_pred HHHHHhcc-------CC-CeEEEcCCCcHHHHHHHHHcCC-------------EEEEecCCCCCCcccCHHHHHHHhhcC
Q 043334 687 KLVLCCIL-------EG-GTLCFPAGSNGNYVSAARFLKA-------------NIVNIPTESEVGFKMTEKTLVTILETV 745 (903)
Q Consensus 687 ~ll~~l~~-------pG-D~Vlv~~P~y~~~~~~~~~~G~-------------~vv~v~~~~~~~f~ld~~~L~~~l~~~ 745 (903)
.++.+++. +| |.|++++|+|..+...+...+. ++..+|. .|+++|+++++++
T Consensus 111 ~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 183 (406)
T 4adb_A 111 AALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALIDDS 183 (406)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCSTT
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHhcCC
Confidence 99988875 66 9999999999988666555443 3334433 4799999998765
Q ss_pred CCcEEEEECCCCCCcccCC--CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEE
Q 043334 746 KKPWVYISGPTINPTGLLY--SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSL 823 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG~v~--s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~ 823 (903)
+ ++|+++ |+ ||||.++ +.+++++|.++|+++|++||+||+|.++.+.+... .....+.. ..++
T Consensus 184 ~-~~v~~~-p~-np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-------~~~~~~~~----~d~~- 248 (406)
T 4adb_A 184 T-CAVIVE-PI-QGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-------AYMHYGVT----PDLL- 248 (406)
T ss_dssp E-EEEEEC-SE-ETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-------HHHHHTCC----CSEE-
T ss_pred e-EEEEEe-CC-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-------HHHhcCCC----CCEE-
Confidence 5 466666 98 9999999 99999999999999999999999998776666542 11222221 1333
Q ss_pred EccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 824 LGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 824 l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
||||.++ +|+|+||++++++ +++.+..... ..+.+.+.|.++..+|+... .+.+.+++.+.++.+.++.+
T Consensus 249 --t~sK~~~-~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~l~~~l~ 320 (406)
T 4adb_A 249 --TTAKALG-GGFPVGALLATEE-CARVMTVGTHGTTYGGNPLASAVAGKVLELIN--TPEMLNGVKQRHDWFVERLN 320 (406)
T ss_dssp --EECGGGG-TTSCCEEEEECHH-HHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHS--SHHHHHHHHHHHHHHHHHHH
T ss_pred --Eechhhc-CCCCeEEEEEcHH-HHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHH
Confidence 6799999 9999999999887 8888876542 67788999999998885211 12334445555555554443
No 102
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.86 E-value=9e-21 Score=212.81 Aligned_cols=231 Identities=9% Similarity=0.012 Sum_probs=172.7
Q ss_pred CCCCcHHHHHHHHHHHHccCC-C---CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccC------
Q 043334 626 FLPIPSLVKAAIFESFARQNM-S---ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILE------ 695 (903)
Q Consensus 626 ~~~~p~~v~~al~~al~~y~~-~---~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~p------ 695 (903)
..++++.+.+++.+.+..... . .+..++.+++++++++.+|.+.+ +|++|+|+++++..++.+++.+
T Consensus 39 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---~i~~~~ggt~a~~~~~~~~~~~~~~~~~ 115 (397)
T 3f9t_A 39 CSNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDA---YGHIVSGGTEANLMALRCIKNIWREKRR 115 (397)
T ss_dssp CCCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTC---EEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCC---CEEEecCcHHHHHHHHHHHHHHHHhhhh
Confidence 344567788888887754221 1 14467788899999999998644 8999999999999999999877
Q ss_pred -------CCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHH
Q 043334 696 -------GGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNK 767 (903)
Q Consensus 696 -------GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~e 767 (903)
||+|+++.|+|+.+...++..|++++.+|++. ++.+|++++++.+++ ++ +++++++|+ ||||.+.+
T Consensus 116 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~-~~v~~~~~~-nptG~~~~-- 189 (397)
T 3f9t_A 116 KGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDV-DGIIGIAGT-TELGTIDN-- 189 (397)
T ss_dssp TTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCC-CEEEEEBSC-TTTCCBCC--
T ss_pred hcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCC-eEEEEECCC-CCCCCCCC--
Confidence 99999999999999999999999999999974 577999999999988 66 599999998 99999988
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCccC--CCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCc
Q 043334 768 EIENILTVCAKYGARVVIDTAFSGLEFN--YEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNH 845 (903)
Q Consensus 768 el~eI~~ia~k~~i~VI~DeaY~~l~f~--~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~ 845 (903)
+++|.++|+++|++||+||+|+.+.++ +...+.......+. +.. +..+++.|++|.++ +|.|+||+++++
T Consensus 190 -l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~s~~K~~~-~~~~~g~~~~~~ 261 (397)
T 3f9t_A 190 -IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFD-FSL-----GVDSITIDPHKMGH-CPIPSGGILFKD 261 (397)
T ss_dssp -HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCS-GGG-----TCSEEECCTTTTTC-CCSSCEEEEESS
T ss_pred -HHHHHHHHHHhCCeEEEEccccchhhhhccccccccccccccc-ccc-----cCCeEEEccccccC-CCCCceEEEEeC
Confidence 888999999999999999999765432 21000000000000 011 14688999999764 788999999987
Q ss_pred HHHHHHHHhCCCC-------------CCCcHHHHHHHHHHH
Q 043334 846 PQLVDAFSSFPGL-------------SKPHSTVRYAIKKLL 873 (903)
Q Consensus 846 ~~li~~l~~~~~~-------------~~~s~~~Q~aa~~~L 873 (903)
+.+++.+...... .+.+...|.++...+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 302 (397)
T 3f9t_A 262 IGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYL 302 (397)
T ss_dssp GGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHH
Confidence 7565555332221 122456677776666
No 103
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.86 E-value=4e-21 Score=219.80 Aligned_cols=242 Identities=9% Similarity=0.050 Sum_probs=174.6
Q ss_pred CCCCCeEEccCCCC--CCCC--cHHHHHHHHHHHHccC---CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 612 TPNSGLIHMDVDQS--FLPI--PSLVKAAIFESFARQN---MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~~--p~~v~~al~~al~~y~---~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
..+...+|++.|.+ +++. ++.+.+++.+.+..+. ...+..+.+.++++.+++.+|.+. ++ +|++|+|++++
T Consensus 39 ~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~-~v~~~~gg~ea 116 (419)
T 2eo5_A 39 VDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNF-QK-KVFFSNSGTEA 116 (419)
T ss_dssp TTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSS-CE-EEEEESSHHHH
T ss_pred CCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCc-CC-EEEEeCchHHH
Confidence 35667899988773 4443 7999999999886542 123456678889999999998763 34 89999999999
Q ss_pred HHHHHHHhcc-CCCeEEEcCCCcHHHHHH-HHHcC-------------CEEEEecCCCCCCcc----------------c
Q 043334 685 FNKLVLCCIL-EGGTLCFPAGSNGNYVSA-ARFLK-------------ANIVNIPTESEVGFK----------------M 733 (903)
Q Consensus 685 l~~ll~~l~~-pGD~Vlv~~P~y~~~~~~-~~~~G-------------~~vv~v~~~~~~~f~----------------l 733 (903)
+..++..+.. +||.|++++|+|.++... ....| .+++.+|.+. .|. +
T Consensus 117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~~~~~~~~ 194 (419)
T 2eo5_A 117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYENPSELVNR 194 (419)
T ss_dssp HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTCHHHHHHH
T ss_pred HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCc--cccccccccccccchhhHHH
Confidence 9998887654 489999999999754433 22222 3577777743 232 3
Q ss_pred CHHHHH-HHhhcC---CCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 734 TEKTLV-TILETV---KKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 734 d~~~L~-~~l~~~---~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
|+++|+ +.+++. .+..+++++|++||||. +.+.+++++|.++|+++|++||+||+|.++.+.+... . .
T Consensus 195 ~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~---~----~ 267 (419)
T 2eo5_A 195 VIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLF---A----I 267 (419)
T ss_dssp HHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---G----G
T ss_pred HHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchh---h----H
Confidence 688998 888741 12357788888578996 7789999999999999999999999998776655421 1 1
Q ss_pred hhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhC-CCCCCCcHHHHHHHHHHHh
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF-PGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~-~~~~~~s~~~Q~aa~~~L~ 874 (903)
......+ ++ .||||.++ +| +|+||++++++ ++ .+... ..+.+.+.++|.++.++|+
T Consensus 268 ~~~~~~~----d~---~t~sK~~~-~G~~riG~~~~~~~-~~-~~~~~~~~t~~~n~~~~~aa~aal~ 325 (419)
T 2eo5_A 268 ENFNTVP----DV---ITLAKALG-GGIMPIGATIFRKD-LD-FKPGMHSNTFGGNALACAIGSKVID 325 (419)
T ss_dssp GGGTCCC----SE---EEECGGGG-TTTSCCEEEEEEGG-GC-CC------CCCCCHHHHHHHHHHHH
T ss_pred HhcCCCC----CE---EEeccccc-CCccceEEEEEchH-hh-cCCcccCCCCCCCHHHHHHHHHHHH
Confidence 1122221 23 28999998 59 99999999887 76 66212 2367789999999999994
No 104
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.86 E-value=5.4e-21 Score=214.28 Aligned_cols=234 Identities=9% Similarity=0.050 Sum_probs=171.2
Q ss_pred CCCCCeEEccCCCC--CCC-CcHHHHHHHHHHHHccC-CCCCc-hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQS--FLP-IPSLVKAAIFESFARQN-MSESE-IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~-~p~~v~~al~~al~~y~-~~~G~-~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..+...+|++.|.+ .++ +++.+.+++.+.+.++. ...++ ......+++.+++++|.+ + +|++|+|+++++.
T Consensus 25 ~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~~---~-~v~~~~g~t~a~~ 100 (375)
T 2eh6_A 25 EEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWTE---G-KVFFANSGTESVE 100 (375)
T ss_dssp TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSSC---E-EEEEESSHHHHHH
T ss_pred CCCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcccCCHHHHHHHHHHHhhcCCC---C-eEEEeCchHHHHH
Confidence 35667899998874 566 78899999998886542 11122 233456677777777872 3 8999999999999
Q ss_pred HHHHH---hc---cCC-CeEEEcCCCcHHHHHHHHHcCCE-------------EEEecCCCCCCcccCHHHHHHHhhcCC
Q 043334 687 KLVLC---CI---LEG-GTLCFPAGSNGNYVSAARFLKAN-------------IVNIPTESEVGFKMTEKTLVTILETVK 746 (903)
Q Consensus 687 ~ll~~---l~---~pG-D~Vlv~~P~y~~~~~~~~~~G~~-------------vv~v~~~~~~~f~ld~~~L~~~l~~~~ 746 (903)
.++.+ ++ +|| |+|++++|+|..+...+...+.. +..++. +|++++++++++++
T Consensus 101 ~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~ 173 (375)
T 2eh6_A 101 AAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDEET 173 (375)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCTTE
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHHhcCCe
Confidence 98865 35 788 99999999998877666544332 222322 58999999987655
Q ss_pred CcEEEEECCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEc
Q 043334 747 KPWVYISGPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLG 825 (903)
Q Consensus 747 ~~~vil~~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~ 825 (903)
++|++++|+ ||||.+ .+.+++++|.++|+++|++||+||+|.++.+.+... + +..++..+ .++
T Consensus 174 -~~v~~~~~~-~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~---~----~~~~~~~~----d~~--- 237 (375)
T 2eh6_A 174 -AGIIIEVIQ-GEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY---A----YQHFNLKP----DVI--- 237 (375)
T ss_dssp -EEEEECSEE-TTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---G----GGGGTCCC----SEE---
T ss_pred -EEEEEeCcc-CCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch---h----hhhcCCCC----CEE---
Confidence 588888886 999999 568999999999999999999999998754443221 1 12222111 233
Q ss_pred cCchhcccccceeeEEEeCcHHHHHHHHhC--CCCCCCcHHHHHHHHHHHh
Q 043334 826 GLSLKMLTGALKFGFLVLNHPQLVDAFSSF--PGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 826 S~SK~~g~~GlRiG~lv~~~~~li~~l~~~--~~~~~~s~~~Q~aa~~~L~ 874 (903)
||||.++ +|+|+||++++++ +++.+... ....+.+.+.|.++..+|+
T Consensus 238 s~SK~~~-~g~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (375)
T 2eh6_A 238 ALAKGLG-GGVPIGAILAREE-VAQSFTPGSHGSTFGGNPLACRAGTVVVD 286 (375)
T ss_dssp EECGGGG-TTSCCEEEEEEHH-HHTTCCTTSCCCSSTTCHHHHHHHHHHHH
T ss_pred EEccccc-CCCCeEEEEEcHH-HHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 8999998 7999999999886 88877662 2356778899998888884
No 105
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.86 E-value=6.9e-21 Score=215.60 Aligned_cols=231 Identities=10% Similarity=0.029 Sum_probs=176.2
Q ss_pred CCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCC-CC-CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 613 PNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNM-SE-SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 613 ~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~-~~-G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
.+...+|++.+. ++++ +++.+.+++.+.+..+.. .. ...+.++++++.+++++|. + ++++|+|+++++..
T Consensus 38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~----~-~v~~~~gg~~a~~~ 112 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTFG----G-KVFFANTGTEANEA 112 (397)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTTS----C-EEEEESSHHHHHHH
T ss_pred CCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcCC----C-eEEEeCCHHHHHHH
Confidence 456788998762 3333 578899999998876432 11 2346788899999998872 3 89999999999999
Q ss_pred HHHHhcc------C-CCeEEEcCCCcHH-HHHHHHHcCCE------------EEEecCCCCCCcccCHHHHHHHhhcCCC
Q 043334 688 LVLCCIL------E-GGTLCFPAGSNGN-YVSAARFLKAN------------IVNIPTESEVGFKMTEKTLVTILETVKK 747 (903)
Q Consensus 688 ll~~l~~------p-GD~Vlv~~P~y~~-~~~~~~~~G~~------------vv~v~~~~~~~f~ld~~~L~~~l~~~~~ 747 (903)
++.++.. + ++.|++++|+|.. +...++..|.+ ++.++. .|++++++.+++++
T Consensus 113 al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~~- 184 (397)
T 2ord_A 113 AIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSEDV- 184 (397)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTTE-
T ss_pred HHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcCe-
Confidence 9988764 5 4789999999855 44467777876 677765 27999999988655
Q ss_pred cEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEcc
Q 043334 748 PWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGG 826 (903)
Q Consensus 748 ~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S 826 (903)
++|++++|+ ||||. +++.+++++|.++|+++|++||+||+|.++.+.+... .+..++..+ .++ |
T Consensus 185 ~~v~~~~~~-nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-------~~~~~~~~~----d~~---s 249 (397)
T 2ord_A 185 CAVFLEPIQ-GESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLF-------AYQKYGVVP----DVL---T 249 (397)
T ss_dssp EEEEECSEE-CTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-------HHHHHTCCC----SEE---E
T ss_pred EEEEEeccc-CCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccch-------hhhhhCCCC----Cee---e
Confidence 589999997 99999 9999999999999999999999999998776655431 122222222 222 8
Q ss_pred CchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHh
Q 043334 827 LSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 827 ~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
|||.++ +|+|+||++++++ ++ .+.... ...+.+.+.|.++.++|+
T Consensus 250 ~sK~~~-~G~r~G~~~~~~~-~~-~l~~~~~~~~~~~~~~~~~a~~~~l~ 296 (397)
T 2ord_A 250 TAKGLG-GGVPIGAVIVNER-AN-VLEPGDHGTTFGGNPLACRAGVTVIK 296 (397)
T ss_dssp ECGGGG-TTSCCEEEEECST-TC-CCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred eccccC-CCcCeEEEEEchH-hc-ccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 899998 8999999999987 66 554322 256778999999998884
No 106
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.86 E-value=6.8e-21 Score=213.38 Aligned_cols=245 Identities=13% Similarity=0.046 Sum_probs=177.9
Q ss_pred EccCCCCCCCCcHHHHHHHHHHHHccC--CC--C----CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 619 HMDVDQSFLPIPSLVKAAIFESFARQN--MS--E----SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 619 dLs~g~p~~~~p~~v~~al~~al~~y~--~~--~----G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
.|+.+.+. ++|+.+++++.+.+.... +. + +..+..+.+++.+++++|.+. + +|++|+|+++++..++.
T Consensus 3 yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~--~-~v~~~~g~t~a~~~~~~ 78 (382)
T 4eb5_A 3 YFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGG--G-TVVFTSGATEANNLAII 78 (382)
T ss_dssp BCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTT--E-EEEEESSHHHHHHHHHH
T ss_pred eeccCCCC-CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCC--C-eEEEcCchHHHHHHHHH
Confidence 45555544 678899999999886521 11 1 123466788888888888753 3 89999999999999999
Q ss_pred Hhc----cCCCeEEEcCCCcHHHHHHHHH---cCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 691 CCI----LEGGTLCFPAGSNGNYVSAARF---LKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 691 ~l~----~pGD~Vlv~~P~y~~~~~~~~~---~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
++. ++||+|++++|+|+.+...+.. .|++++.+++++ ++.+|++++++.+++++ ++|++++|+ ||||.+
T Consensus 79 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~-~~v~~~~~~-nptG~~ 154 (382)
T 4eb5_A 79 GYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDT-ILVSVQHAN-NEIGTI 154 (382)
T ss_dssp HHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTE-EEEECCSBC-TTTCBB
T ss_pred HHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCC-eEEEEeccC-CCcccc
Confidence 998 8999999999999998777754 699999999974 46799999999998765 588899997 999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
++ +++|.++|+++|++ |+|++|+ +.... .+ +... +.+++++|+||.+|.+| +||+++
T Consensus 155 ~~---l~~i~~l~~~~~~~-i~D~a~~---~g~~~---~~----~~~~-------~~di~~~s~sK~~g~~g--~G~~~~ 211 (382)
T 4eb5_A 155 QP---VEEISEVLAGKAAL-HIDATAS---VGQIE---VD----VEKI-------GADMLTISSNDIYGPKG--VGALWI 211 (382)
T ss_dssp CC---HHHHHHHHTTSSEE-EEECTTT---BTTBC---CC----HHHH-------TCSEEEEETGGGTCCSS--CEEEEE
T ss_pred CC---HHHHHHHHHHCCCE-EEEcchh---cCCcc---cC----cccc-------CCCEEEeehHHhcCCCc--eEEEEE
Confidence 99 78899999999999 9999996 22211 11 1111 25789999999988667 799999
Q ss_pred CcHHH-HHHHHh------CCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 844 NHPQL-VDAFSS------FPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 844 ~~~~l-i~~l~~------~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++ . +..+.. ......++...+.++..++. . ++++++++++.++++++.+.
T Consensus 212 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~--~-----~~~~~~~~~~~~~~~~~~l~ 269 (382)
T 4eb5_A 212 RKE-AKLQPVILGGGQENGLRSGSENVPSIVGFGKAAE--I-----TAMEWREEAERLRRLRDRII 269 (382)
T ss_dssp ETT-CCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH--H-----HHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-cccCceecCCCccccccCCCccHHHHHHHHHHHH--H-----HHHhHHHHHHHHHHHHHHHH
Confidence 876 2 111100 01133455666666666663 1 12345666666777666653
No 107
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.86 E-value=2.1e-20 Score=214.21 Aligned_cols=243 Identities=12% Similarity=0.028 Sum_probs=170.3
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccC---CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQN---MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~---~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..+...+|++.| .+.++ .++.+.+++.+.+.+.. ...+..+.+.++++++++.++.+.+ +|++|+|+++++
T Consensus 26 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---~v~~~~gg~ea~ 102 (430)
T 3i4j_A 26 DAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTF---RFWAVSGGSEAT 102 (430)
T ss_dssp TTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTC---EEEEESSHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCC---EEEEeCcHHHHH
Confidence 356778999876 45555 38899999998876532 2356778899999999998886554 899999999999
Q ss_pred HHHHHHhcc--------CCCeEEEcCCCcHHHHHHHHHcCCE---------------EEEecCCCC-CCcccCHHHHHHH
Q 043334 686 NKLVLCCIL--------EGGTLCFPAGSNGNYVSAARFLKAN---------------IVNIPTESE-VGFKMTEKTLVTI 741 (903)
Q Consensus 686 ~~ll~~l~~--------pGD~Vlv~~P~y~~~~~~~~~~G~~---------------vv~v~~~~~-~~f~ld~~~L~~~ 741 (903)
..++..++. +||.|++.+|+|..+...+...+.. +..++.... .....|+++|++.
T Consensus 103 ~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 182 (430)
T 3i4j_A 103 ESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRAL 182 (430)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHH
Confidence 999988873 4789999999999887665544432 222332110 0011356888888
Q ss_pred hhc---CCCcEEEEECCCCC-Cccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhh-ccCC
Q 043334 742 LET---VKKPWVYISGPTIN-PTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL-YSST 815 (903)
Q Consensus 742 l~~---~~~~~vil~~P~~N-PTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l-~~~~ 815 (903)
++. .+ ..+++++|++| |+|. +++.+++++|.++|++||++||+||+|.++.+.+... . .... ...+
T Consensus 183 l~~~~~~~-~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~---~----~~~~~~~~~ 254 (430)
T 3i4j_A 183 LEREGPET-VAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPL---A----LSRWSGVTP 254 (430)
T ss_dssp HHHHCGGG-EEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---G----GGGTTTCCC
T ss_pred HHhcCCCC-EEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh---h----hhhhcCCCC
Confidence 873 33 36777788757 8887 6788899999999999999999999998876655431 1 1222 1111
Q ss_pred CCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhC-----C-CCCCCcHHHHHHHHHHHh
Q 043334 816 NSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF-----P-GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 816 ~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~-----~-~~~~~s~~~Q~aa~~~L~ 874 (903)
. +.+|||+++ .| ||+||++++++ +++.+.+. . ..++.++++|.++.++|+
T Consensus 255 ----d---i~t~sK~l~-~G~~r~G~~~~~~~-i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 311 (430)
T 3i4j_A 255 ----D---IAVLGKGLA-AGYAPLAGLLAAPQ-VYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD 311 (430)
T ss_dssp ----S---EEEECGGGT-TTSSCCEEEEECHH-HHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred ----c---EEEEccccc-CCccccEEEEECHH-HHHHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence 2 336999998 59 99999999887 99999863 2 367889999999999995
No 108
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.85 E-value=1e-20 Score=214.39 Aligned_cols=256 Identities=11% Similarity=0.087 Sum_probs=184.5
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccC--C--CCC----chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQN--M--SES----EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~--~--~~G----~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
+.+.|+.+.+. ++|+.+.+++.+.+..+. + .+. ..+..+.+++.+++++|.+.+ +|++|+|+++++..
T Consensus 26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~al~~ 101 (406)
T 3cai_A 26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPG---GVVLGADRAVLLSL 101 (406)
T ss_dssp SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG---GEEEESCHHHHHHH
T ss_pred CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC---eEEEeCChHHHHHH
Confidence 47899988877 678889999988886532 1 111 234567788888888887533 89999999999999
Q ss_pred HHHHh---ccCCCeEEEcCCCcHHHHHHHHH----cCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCc
Q 043334 688 LVLCC---ILEGGTLCFPAGSNGNYVSAARF----LKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPT 760 (903)
Q Consensus 688 ll~~l---~~pGD~Vlv~~P~y~~~~~~~~~----~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPT 760 (903)
++.++ +++||+|+++.|+|+.+...+.. .|++++.+++++ +++.+|+++|++.+++++ ++|++++|+ |||
T Consensus 102 ~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~-~~v~~~~~~-npt 178 (406)
T 3cai_A 102 LAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKST-RLVAVNSAS-GTL 178 (406)
T ss_dssp HHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTE-EEEEEESBC-TTT
T ss_pred HHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCc-eEEEEeCCc-CCc
Confidence 98887 78999999999999886555433 799999999874 345789999999998765 589999998 999
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee-
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG- 839 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG- 839 (903)
|.+++ +++|.++|+++|++||+|++|+. +... ++ +..+ +..+++.|+||.+| ++ +|
T Consensus 179 G~~~~---l~~i~~l~~~~~~~li~D~a~~~---g~~~---~~----~~~~-------~~d~~~~s~~K~~g-~~--~G~ 235 (406)
T 3cai_A 179 GGVTD---LRAMTKLVHDVGALVVVDHSAAA---PYRL---LD----IRET-------DADVVTVNAHAWGG-PP--IGA 235 (406)
T ss_dssp CBBCC---CHHHHHHHHHTTCEEEEECTTTT---TTCC---CC----HHHH-------CCSEEEEEGGGGTS-CS--CEE
T ss_pred cccCC---HHHHHHHHHHcCCEEEEEccccc---CCCC---CC----chhc-------CCCEEEeehhhhcC-CC--cCe
Confidence 99998 78899999999999999999962 1111 11 1111 25789999999876 54 99
Q ss_pred EEEeCcHHHHHHHHhCCC-----------CCCCcHHHHHHHHHHHhcccccc--------hhHHHHHHHHHHHHHHHHHH
Q 043334 840 FLVLNHPQLVDAFSSFPG-----------LSKPHSTVRYAIKKLLGLRERKA--------RDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 840 ~lv~~~~~li~~l~~~~~-----------~~~~s~~~Q~aa~~~L~~~~~~~--------~~~~~~l~~~r~~y~~Rr~~ 900 (903)
|++++++ +++.+..... ...++...+.++..+++...... ..+..+++++++.++++++.
T Consensus 236 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (406)
T 3cai_A 236 MVFRDPS-VMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDY 314 (406)
T ss_dssp EEESCHH-HHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEehH-HHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHH
Confidence 9999886 8877765431 23345555555555553111000 11223566666667666666
Q ss_pred Hh
Q 043334 901 LK 902 (903)
Q Consensus 901 l~ 902 (903)
+.
T Consensus 315 l~ 316 (406)
T 3cai_A 315 LM 316 (406)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 109
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.85 E-value=6.8e-21 Score=214.96 Aligned_cols=221 Identities=11% Similarity=0.005 Sum_probs=170.7
Q ss_pred CCC-CeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 613 PNS-GLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 613 ~~~-~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
.|. +++|++.+.++.++++.+++++. .+ .+...+.+.+++.+++.+|.+ .++ ++++++|+++++..++.+
T Consensus 25 ~g~~~v~~~~~~~~~~~~~~~v~~a~~----~~---~~~~~~~~~~~~~~a~~~g~~-~~~-~~~~~~ggt~a~~~~~~~ 95 (374)
T 2aeu_A 25 KGRDALYDLSGLSGGFLIDEKDKALLN----TY---IGSSYFAEKVNEYGLKHLGGD-END-KCVGFNRTSSAILATILA 95 (374)
T ss_dssp TCGGGCEECSSCCCCCCCCHHHHHHHT----ST---THHHHHHHHHHHHHHHHHTCC-TTE-EEEEESSHHHHHHHHHHH
T ss_pred cCccceeeecccCCCCCCCHHHHHHHH----Hh---cCchHHHHHHHHHHHHHhCCC-Ccc-eEEEEcChHHHHHHHHHh
Confidence 455 79999999999999999988875 22 123455678888888888875 234 799999999999999988
Q ss_pred hccCCCeEEEcCCCcHHHHH---HHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcE-EEEECCCCCCcccCCCHH
Q 043334 692 CILEGGTLCFPAGSNGNYVS---AARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPW-VYISGPTINPTGLLYSNK 767 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~~~~---~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~-vil~~P~~NPTG~v~s~e 767 (903)
+ |||+|+++.|+|+.+.. .++..|++++.+ . |++++++. ++++ ++ |++++|+ ||||. +..
T Consensus 96 ~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-~--------d~~~l~~~-~~~~-~~~v~~~~p~-nptG~--~~~ 159 (374)
T 2aeu_A 96 L--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES-D--------KVGEILNK-IDKD-TLVIITGSTM-DLKVI--ELE 159 (374)
T ss_dssp H--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE-S--------CHHHHHTT-CCTT-EEEEEECBCT-TSCBC--CHH
T ss_pred C--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe-C--------CHHHHHhc-CCCc-cEEEEEccCC-CCCCC--Ccc
Confidence 7 99999999997765332 678889999888 2 68889887 5555 58 8889998 99997 788
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHH
Q 043334 768 EIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQ 847 (903)
Q Consensus 768 el~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~ 847 (903)
++++|.++|+++|++||+||+|+.+. .+.... . +... . +.+++++|+||.+ +|+|+||++++++
T Consensus 160 ~l~~i~~l~~~~~~~li~De~~~~~~-~~~~~~-~---~~~~-~-------~~di~~~S~sK~l--~g~~~G~~~~~~~- 223 (374)
T 2aeu_A 160 NFKKVINTAKNKEAIVFVDDASGARV-RLLFNQ-P---PALK-L-------GADLVVTSTDKLM--EGPRGGLLAGKKE- 223 (374)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTHHHH-HHHTTC-C---CHHH-H-------TCSEEEEETTSSS--SSCSCEEEEEEHH-
T ss_pred cHHHHHHHHHHcCCEEEEECCccccc-cccccc-C---Cccc-c-------CCcEEEecCcccc--cCcceEEEEECHH-
Confidence 99999999999999999999996542 110000 0 0111 1 2468999999985 5899999999886
Q ss_pred HHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 848 LVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 848 li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
+++.+..... ..+++.+.|.++..+|.
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~a~~~al~ 252 (374)
T 2aeu_A 224 LVDKIYIEGTKFGLEAQPPLLAGIYRALK 252 (374)
T ss_dssp HHHHHHHHHHTTTCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhccccCCCCHHHHHHHHHHHH
Confidence 8888876543 34578889999998885
No 110
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.85 E-value=2.5e-20 Score=210.16 Aligned_cols=202 Identities=12% Similarity=0.127 Sum_probs=153.0
Q ss_pred CCCCCCCC-c---HHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCC
Q 043334 622 VDQSFLPI-P---SLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEG 696 (903)
Q Consensus 622 ~g~p~~~~-p---~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pG 696 (903)
.++|++++ | +.+.+++.+.+.+....++..+..+.+++.+++++|.+ . .|++++| ++++..++.++ +++|
T Consensus 4 ~~~p~f~~~p~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~-~---~i~~~sG-t~al~~~l~~l~~~~g 78 (388)
T 1b9h_A 4 RKAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAA-H---ALAVTNG-THALELALQVMGVGPG 78 (388)
T ss_dssp -CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCS-E---EEEESCH-HHHHHHHHHHTTCCTT
T ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCC-e---EEEeCCH-HHHHHHHHHHcCCCCc
Confidence 45677876 6 88999999988653111222222334444445555654 2 7999998 79999999999 8999
Q ss_pred CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHH
Q 043334 697 GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVC 776 (903)
Q Consensus 697 D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia 776 (903)
|+|+++.|+|+.+...++..|++++.+++++ ++|.+|++.+++.+++++ ++|+ |+ ||||.+.+ +++|.++|
T Consensus 79 d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~-~~v~---~~-n~tG~~~~---l~~i~~la 149 (388)
T 1b9h_A 79 TEVIVPAFTFISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRT-KVIM---PV-HMAGLMAD---MDALAKIS 149 (388)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTE-EEEC---CB-CGGGCCCC---HHHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCc-eEEE---Ee-CCccCcCC---HHHHHHHH
Confidence 9999999999999999999999999999975 357899999999997654 3443 98 99999987 78889999
Q ss_pred HhCCcEEEEecCCCC-CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH--HHHHH
Q 043334 777 AKYGARVVIDTAFSG-LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL--VDAFS 853 (903)
Q Consensus 777 ~k~~i~VI~DeaY~~-l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l--i~~l~ 853 (903)
+++|++||+|++|+. ..+.+.. + ... .++.+.||||..+++|.|+||++++++.+ ++.+.
T Consensus 150 ~~~~~~li~D~a~~~g~~~~~~~---------~---~~~-----~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~ 212 (388)
T 1b9h_A 150 ADTGVPLLQDAAHAHGARWQGKR---------V---GEL-----DSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAF 212 (388)
T ss_dssp HHHTCCBCEECTTCTTCEETTEE---------G---GGS-----SSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHH
T ss_pred HHcCCEEEEecchhcCCccCCee---------c---ccc-----cceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHH
Confidence 999999999999974 3343221 1 111 26789999988878888999999987546 56664
Q ss_pred h
Q 043334 854 S 854 (903)
Q Consensus 854 ~ 854 (903)
.
T Consensus 213 ~ 213 (388)
T 1b9h_A 213 L 213 (388)
T ss_dssp H
T ss_pred H
Confidence 3
No 111
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.85 E-value=3.8e-20 Score=207.21 Aligned_cols=200 Identities=12% Similarity=0.045 Sum_probs=155.6
Q ss_pred CCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCC
Q 043334 625 SFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAG 704 (903)
Q Consensus 625 p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P 704 (903)
.+.++++.+.+++.+.+..+ ......+..+.+++++++.+|.+..++ +|++|+|+++++. ++..++++||+|+++.|
T Consensus 9 gp~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~-~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~ 85 (384)
T 3zrp_A 9 GPTTIKEDVLVAGLENNVGF-TSKEFVEALAYSLKGLRYVMGASKNYQ-PLIIPGGGTSAME-SVTSLLKPNDKILVVSN 85 (384)
T ss_dssp SCSCCCHHHHHHTTCCSCCT-TSHHHHHHHHHHHHHHHHHHTCCTTSE-EEEEESCHHHHHH-HGGGGCCTTCEEEEECS
T ss_pred CCCCCCHHHHHHhhcccccc-ccHHHHHHHHHHHHHHHHHhCCCCCCc-EEEEcCCcHHHHH-HHHhhcCCCCEEEEecC
Confidence 34567788887776543222 222345667888889999899876334 8999999999999 89999999999999999
Q ss_pred CcHH--HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcE
Q 043334 705 SNGN--YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGAR 782 (903)
Q Consensus 705 ~y~~--~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~ 782 (903)
+|.. +...++..|++++.++++. ++.+|++++++.+++...++|++++|+ ||||.+++ +++|.++|+++|++
T Consensus 86 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~-nptG~~~~---l~~i~~l~~~~~~~ 159 (384)
T 3zrp_A 86 GVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVE-TSTGVREP---VKDVINKIRKYVEL 159 (384)
T ss_dssp SHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEE-TTTTEECC---HHHHHHHHGGGEEE
T ss_pred CcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCC-CCCceECc---HHHHHHHHHhcCCE
Confidence 9965 6677788999999999975 456899999999987333699999997 99999999 78899999999999
Q ss_pred EEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHH
Q 043334 783 VVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 783 VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l 852 (903)
||+|++|+.... .. + +... +..+++.|+||.++ .+.++||++++++ +++.+
T Consensus 160 li~D~a~~~~~~---~~---~-------~~~~----~~d~~~~s~~K~~~-~~~g~g~~~~~~~-~~~~~ 210 (384)
T 3zrp_A 160 IVVDGVSSVGAE---EV---K-------AEEW----NVDVYLTASQKALG-SAAGLGLLLLSPK-ALSIL 210 (384)
T ss_dssp EEEECTTTTTTS---CC---C-------TTTT----TCSEEEEETTSTTC-CCSSEEEEEECHH-HHHHH
T ss_pred EEEECcccccCc---cc---c-------cccc----CCCEEEecCccccc-CCCceEEEEECHH-HHHHh
Confidence 999999863211 10 0 1111 36789999999885 2344899999987 77776
No 112
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.85 E-value=5.7e-21 Score=215.77 Aligned_cols=252 Identities=10% Similarity=0.028 Sum_probs=179.8
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHcc-CC-------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQ-NM-------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y-~~-------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
...+.|.|+.+.+. ++|+.+.+++.+.+.+. .. ..+..+..+.+++++++++|.+.+ +|++|+|++++
T Consensus 17 ~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---~v~~~~g~t~a 92 (400)
T 3vax_A 17 RGSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD---ELIFTSGATES 92 (400)
T ss_dssp -----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG---GEEEESCHHHH
T ss_pred ccCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC---cEEEeCCHHHH
Confidence 34567888877766 67888999988887532 11 112345578899999999998643 89999999999
Q ss_pred HHHHHHHhc----cCCC-eEEEcCCCcHHHHHHHHH---cCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCC
Q 043334 685 FNKLVLCCI----LEGG-TLCFPAGSNGNYVSAARF---LKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPT 756 (903)
Q Consensus 685 l~~ll~~l~----~pGD-~Vlv~~P~y~~~~~~~~~---~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~ 756 (903)
+..++.+++ ++|| .|+++.++|+.+...+.. .|++++.++++. ++.+|++++++++++++ +++++++|+
T Consensus 93 l~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~-~~v~~~~~~ 169 (400)
T 3vax_A 93 NNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDT-LLVSLMHVN 169 (400)
T ss_dssp HHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTE-EEEECCSBC
T ss_pred HHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCc-eEEEEECCC
Confidence 999999998 8999 999999999998776654 699999999874 56799999999998766 589999998
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 757 INPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 757 ~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
||||.+++ +++|.++|+++|++||+|++|+... .. . .+.. . ..+++.|+||.+|.+|
T Consensus 170 -nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~---~~---------~-~~~~----~-~d~~~~s~~K~~g~~g- 226 (400)
T 3vax_A 170 -NETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK---VP---------G-DLTT----P-IDMISISGHKIGAPKG- 226 (400)
T ss_dssp -TTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT---SG---------G-GGGS----C-CSEEEEETGGGTSCSS-
T ss_pred -CCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC---CC---------c-Chhh----c-CcEEEEeHHHhCCCCc-
Confidence 99999999 7889999999999999999996211 11 0 0111 1 3589999999877655
Q ss_pred eeeEEE-eCcHHHH---HHHHhCC---------CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 837 KFGFLV-LNHPQLV---DAFSSFP---------GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 837 RiG~lv-~~~~~li---~~l~~~~---------~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+|+++ ++++.+. ..+.... ....++...+.++..++.. +.++++++++.++++++++.
T Consensus 227 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~~l~ 297 (400)
T 3vax_A 227 -VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI-------FEAEHAQWQVAAQDLRSRLL 297 (400)
T ss_dssp -CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH-------HHHSHHHHHHHHHHHHHHHH
T ss_pred -eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH-------HHhhHHHHHHHHHHHHHHHH
Confidence 67777 7662111 1111111 1334566677766666631 12445666777777776654
No 113
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.85 E-value=2.4e-20 Score=213.81 Aligned_cols=266 Identities=11% Similarity=0.051 Sum_probs=185.4
Q ss_pred CCCCeEEccCCCC--CCC-CcHHHHHHHHHHHHccC--CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 613 PNSGLIHMDVDQS--FLP-IPSLVKAAIFESFARQN--MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 613 ~~~~~IdLs~g~p--~~~-~p~~v~~al~~al~~y~--~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
.+...+|+..+.+ +++ .++.+.+++.+.+..+. ...+..+.+.++++.+++.++... + +|++|+|+++++..
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~-~v~~~~gg~ea~~~ 117 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGL--D-RALLLSTGAESNEA 117 (433)
T ss_dssp TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTC--C-EEEEESCHHHHHHH
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCc--C-EEEEeCchHHHHHH
Confidence 4567889876654 344 47889999998886642 223345678889999999887654 3 89999999999999
Q ss_pred HHHHhc--cCCCeEEEcCCCcHHHHHHHHHc--------------CCEEEEecCCCCCCcc--------cCHHHHHHHhh
Q 043334 688 LVLCCI--LEGGTLCFPAGSNGNYVSAARFL--------------KANIVNIPTESEVGFK--------MTEKTLVTILE 743 (903)
Q Consensus 688 ll~~l~--~pGD~Vlv~~P~y~~~~~~~~~~--------------G~~vv~v~~~~~~~f~--------ld~~~L~~~l~ 743 (903)
++..+. ..+|.|++.+|+|.++...+... |+..++++......|. +|+++|++.++
T Consensus 118 a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 197 (433)
T 1zod_A 118 AIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLID 197 (433)
T ss_dssp HHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHH
Confidence 987653 23579999999997654433321 3444444322111222 46899999887
Q ss_pred c---CCCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCC
Q 043334 744 T---VKKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSF 819 (903)
Q Consensus 744 ~---~~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~ 819 (903)
+ .+ ..+++++|++||||. +.+.+++++|.++|++||++||+||+|.++.+.+... . .......+
T Consensus 198 ~~~~~~-~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~---~----~~~~~~~~---- 265 (433)
T 1zod_A 198 RQSSGN-LAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF---A----CQRDGVTP---- 265 (433)
T ss_dssp HHCCSC-EEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---T----HHHHTCCC----
T ss_pred hcCCCC-eEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHh---H----HhhcCCCC----
Confidence 4 23 357778887689995 6789999999999999999999999998765544321 1 12222111
Q ss_pred ceEEEccCchhcccccceeeEEEeCcHHHHHHHHhC--C--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHH
Q 043334 820 NVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSF--P--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLE 895 (903)
Q Consensus 820 ~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~--~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~ 895 (903)
. +.||||.+++ |+|+||++++++ +++.+... . .+.+.+.++|.++.++|+.-.. +.+.+++.++++.++
T Consensus 266 d---i~s~sK~~~~-G~~ig~~~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~ 338 (433)
T 1zod_A 266 D---ILTLSKTLGA-GLPLAAIVTSAA-IEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR--DGLVARANVMGDRLR 338 (433)
T ss_dssp S---EEEECHHHHT-TSSCEEEEECHH-HHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHH
T ss_pred C---EEEecccccC-CCCeeEEEEhHH-HHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHH
Confidence 2 3489999985 999999999987 99888762 2 3667789999998888842111 234566666666666
Q ss_pred HHHHH
Q 043334 896 SRSKR 900 (903)
Q Consensus 896 ~Rr~~ 900 (903)
++.+.
T Consensus 339 ~~l~~ 343 (433)
T 1zod_A 339 RGLLD 343 (433)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 114
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.85 E-value=5.6e-20 Score=210.58 Aligned_cols=267 Identities=10% Similarity=0.059 Sum_probs=184.9
Q ss_pred CCCCCeEEccCCCC--CCC-CcHHHHHHHHHHHHccCC--CCC-chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 612 TPNSGLIHMDVDQS--FLP-IPSLVKAAIFESFARQNM--SES-EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~-~p~~v~~al~~al~~y~~--~~G-~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..+...+|++.+.+ +++ .++.+.+++.+.+..+.. ..+ ..+...++++.++++++... + +|++|+|+++++
T Consensus 40 ~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~-~v~~~~ggtea~ 116 (429)
T 1s0a_A 40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPL--E-CVFLADSGSVAV 116 (429)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTC--C-EEEEESSHHHHH
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCC--C-EEEEeCCHHHHH
Confidence 34567889987763 444 588999999998865421 113 34567788888998887643 3 899999999999
Q ss_pred HHHHHHhc---c----CCCeEEEcCCCcHHHHHHHHHc----------------CCEEEEecCCC-CCCc-ccCHHHHHH
Q 043334 686 NKLVLCCI---L----EGGTLCFPAGSNGNYVSAARFL----------------KANIVNIPTES-EVGF-KMTEKTLVT 740 (903)
Q Consensus 686 ~~ll~~l~---~----pGD~Vlv~~P~y~~~~~~~~~~----------------G~~vv~v~~~~-~~~f-~ld~~~L~~ 740 (903)
..++..+. + |||.|++.+|+|..+...+... ++..++++... ++.| .+|++++++
T Consensus 117 ~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 196 (429)
T 1s0a_A 117 EVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFAR 196 (429)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHH
T ss_pred HHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHH
Confidence 99887654 2 6899999999998754433221 23444443211 1234 478999999
Q ss_pred HhhcC-CCcEEEEECCC-CCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCC
Q 043334 741 ILETV-KKPWVYISGPT-INPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNS 817 (903)
Q Consensus 741 ~l~~~-~~~~vil~~P~-~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~ 817 (903)
.+++. ....+++++|+ |||||. +.+.+++++|.++|+++|+++|+||+|.++.+.+... . .......+
T Consensus 197 ~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~---~----~~~~~~~~-- 267 (429)
T 1s0a_A 197 LMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF---A----CEHAEIAP-- 267 (429)
T ss_dssp HHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---G----GGGGTCCC--
T ss_pred HHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH---H----hhhcCCCC--
Confidence 88741 12367788897 799995 6678999999999999999999999998765444321 1 11111111
Q ss_pred CCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhC------C-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHH
Q 043334 818 SFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF------P-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAE 889 (903)
Q Consensus 818 ~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~------~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~ 889 (903)
.+ .||||.++ +| +|+||++++++ +++.+... . .+.+++.++|.++.++|+.-.. +.+.+++.+
T Consensus 268 --d~---~t~sK~l~-~G~~~iG~~~~~~~-~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~--~~~~~~~~~ 338 (429)
T 1s0a_A 268 --DI---LCLGKALT-GGTMTLSATLTTRE-VAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES--GDWQQQVAD 338 (429)
T ss_dssp --SE---EEECGGGG-TSSSCCEEEEECHH-HHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT--CHHHHHHHH
T ss_pred --CE---EEeccccc-CCCccceEEEeCHH-HHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHH
Confidence 22 37999998 58 99999999887 88988763 2 3667789999999888842111 234455666
Q ss_pred HHHHHHHHHH
Q 043334 890 HIRNLESRSK 899 (903)
Q Consensus 890 ~r~~y~~Rr~ 899 (903)
+++.++++.+
T Consensus 339 ~~~~l~~~L~ 348 (429)
T 1s0a_A 339 IEVQLREQLA 348 (429)
T ss_dssp HHHHHHHHHG
T ss_pred HHHHHHHHHH
Confidence 6666665543
No 115
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.85 E-value=6.7e-20 Score=206.48 Aligned_cols=210 Identities=11% Similarity=0.117 Sum_probs=161.4
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI 693 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~ 693 (903)
.+..+.++.| +.++++.+.+++.+.+... ......+..+.+++.+++++|.+.+ .+|++|+|+++++..++.+++
T Consensus 17 ~~~~~~~~~g--~~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~g~~~~--~~i~~~~g~t~a~~~~~~~~~ 91 (393)
T 2huf_A 17 TPNKLLMGPG--PSNAPQRVLDAMSRPILGH-LHPETLKIMDDIKEGVRYLFQTNNI--ATFCLSASGHGGMEATLCNLL 91 (393)
T ss_dssp CCCCEECSSS--CCCCCHHHHHHTTSCCCCT-TSHHHHHHHHHHHHHHHHHHTCCCS--EEEEESSCHHHHHHHHHHHHC
T ss_pred CCCeEEecCC--CCCCCHHHHHHHHhhhccC-CCHHHHHHHHHHHHHHHHHhCCCCC--cEEEEcCcHHHHHHHHHHHHh
Confidence 3456776666 3567888888876654321 1112234567788888888887532 279999999999999999999
Q ss_pred cCCCeEEEcCCCcHHH--HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 694 LEGGTLCFPAGSNGNY--VSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 694 ~pGD~Vlv~~P~y~~~--~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++||+|+++.|+|+.+ ...++..|++++.++++. ++.+|++.+++.+++ ++ ++|++++|+ ||||.+++ ++
T Consensus 92 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~-~~v~~~~~~-nptG~~~~---l~ 164 (393)
T 2huf_A 92 EDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKP-SVLFLTQGD-SSTGVLQG---LE 164 (393)
T ss_dssp CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCC-SEEEEESEE-TTTTEECC---CT
T ss_pred CCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCC-cEEEEEccC-CCccccCC---HH
Confidence 9999999999999884 334567899999999864 457999999999987 66 599999998 99999999 88
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchh-cccccceeeEEEeCcHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLK-MLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~-~g~~GlRiG~lv~~~~~li 849 (903)
+|.++|+++|++||+|++++ +..... + +... +.++++.|+||. +|++|+ ||++++++ ++
T Consensus 165 ~i~~~~~~~~~~li~D~a~~---~~~~~~---~-------~~~~----~~d~~~~s~sK~l~g~~G~--G~~~~~~~-~~ 224 (393)
T 2huf_A 165 GVGALCHQHNCLLIVDTVAS---LGGAPM---F-------MDRW----EIDAMYTGSQKVLGAPPGI--TPVSFSHR-AV 224 (393)
T ss_dssp THHHHHHHTTCEEEEECTTT---BTTBCC---C-------TTTT----TCSEEECCSSSTTCCCSSC--EEEEECHH-HH
T ss_pred HHHHHHHHcCCEEEEEcccc---cCCCCc---c-------hhhc----CccEEEECCCcccccCCCe--EEEEECHH-HH
Confidence 99999999999999999984 222111 1 1111 367899999997 567887 99999876 88
Q ss_pred HHHHhC
Q 043334 850 DAFSSF 855 (903)
Q Consensus 850 ~~l~~~ 855 (903)
+.+...
T Consensus 225 ~~~~~~ 230 (393)
T 2huf_A 225 ERYKRR 230 (393)
T ss_dssp HHHHTC
T ss_pred HHHhhc
Confidence 888764
No 116
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.84 E-value=3.8e-20 Score=208.72 Aligned_cols=247 Identities=11% Similarity=0.087 Sum_probs=178.4
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEE
Q 043334 621 DVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLC 700 (903)
Q Consensus 621 s~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vl 700 (903)
..+.++.++++.+.+++.+.+.. ..........+.+++.+++++|.+.+ .+|++|+|+++++..++.+++++||+|+
T Consensus 21 ~~~~~p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~~~--~~v~~~~g~t~al~~~~~~~~~~gd~vl 97 (396)
T 2ch1_A 21 MMGPGPSNCSKRVLTAMTNTVLS-NFHAELFRTMDEVKDGLRYIFQTENR--ATMCVSGSAHAGMEAMLSNLLEEGDRVL 97 (396)
T ss_dssp CCSSSSCCCCHHHHHHTTSCCCC-TTCHHHHHHHHHHHHHHHHHHTCCCS--CEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred eecCCCCCCCHHHHHHhcccccc-CCChhHHHHHHHHHHHHHHHhCCCCC--cEEEECCcHHHHHHHHHHHhcCCCCeEE
Confidence 34555666788888877654322 11111113456677777777787532 2699999999999999999999999999
Q ss_pred EcCCCcHHHH--HHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHH
Q 043334 701 FPAGSNGNYV--SAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIENILTVCA 777 (903)
Q Consensus 701 v~~P~y~~~~--~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~ 777 (903)
+++|+|+.+. ..++..|++++.++++. ++.+|++++++.+++ ++ ++|++++|+ ||||.+++ +++|.++|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~-~~v~~~~~~-nptG~~~~---~~~i~~l~~ 170 (396)
T 2ch1_A 98 IAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQP-KCLFLTHGD-SSSGLLQP---LEGVGQICH 170 (396)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCC-SEEEEESEE-TTTTEECC---CTTHHHHHH
T ss_pred EEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCC-CEEEEECCC-CCCceecC---HHHHHHHHH
Confidence 9999999985 47788999999999864 577999999999987 56 599999998 99999999 888999999
Q ss_pred hCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhC--
Q 043334 778 KYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSF-- 855 (903)
Q Consensus 778 k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~-- 855 (903)
++|++||+||+|+ ++..+. + + ... +..+++.|++|.++ ++.++||+++++. +++.+...
T Consensus 171 ~~~~~li~Dea~~---~g~~~~---~----~---~~~----~~d~~~~s~~K~~~-~~~g~g~~~~~~~-~~~~~~~~~~ 231 (396)
T 2ch1_A 171 QHDCLLIVDAVAS---LCGVPF---Y----M---DKW----EIDAVYTGAQKVLG-APPGITPISISPK-ALDVIRNRRT 231 (396)
T ss_dssp HTTCEEEEECTTT---BTTBCC---C----T---TTT----TCCEEECCCC-CCC-CCSSCEEEEECHH-HHHHHHTCSS
T ss_pred HcCCEEEEEcccc---ccCCcc---c----h---hhc----CcCEEEEcCCcccc-CCCCeEEEEECHH-HHHhhhhccC
Confidence 9999999999996 322211 1 1 111 23567799999765 3345699999886 88877532
Q ss_pred ----------------------C-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 856 ----------------------P-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 856 ----------------------~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
. ...+++...|.++..+|.. - .+++++++++.++++++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--~----~~~~~~~~~~~~~~~~~~l~ 295 (396)
T 2ch1_A 232 KSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQ--I----AEEGLENQIKRRIECAQILY 295 (396)
T ss_dssp CCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHH--H----HHHCHHHHHHHHHHHHHHHH
T ss_pred cccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHH--H----HHhhHHHHHHHHHHHHHHHH
Confidence 1 1345678888888888841 1 12345566666667666654
No 117
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.84 E-value=8.8e-21 Score=217.03 Aligned_cols=250 Identities=14% Similarity=0.094 Sum_probs=166.8
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHcc-C-CCCCc------hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQ-N-MSESE------IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y-~-~~~G~------~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
.+.+.|+.+.+. ++|+.+++++.+.+... . +..++ .+..+.+++.+++++|++. + +|++|+|+++++.
T Consensus 17 ~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~--~-~v~~~~g~t~a~~ 92 (432)
T 3a9z_A 17 NRKVYMDYNATT-PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKP--Q-DIIFTSGGTESNN 92 (432)
T ss_dssp -CCEECBTTTCC-CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCG--G-GEEEESCHHHHHH
T ss_pred CCcEEeeCCccC-CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCc--C-eEEEeCChHHHHH
Confidence 468999999887 67888999998887652 1 11122 2334677777777788753 3 8999999999999
Q ss_pred HHHHHhc--------cCCCeEEEcCCCcHHH-----------------HHHHHHcCCEEEEecCCCCCCcccCHHHHHHH
Q 043334 687 KLVLCCI--------LEGGTLCFPAGSNGNY-----------------VSAARFLKANIVNIPTESEVGFKMTEKTLVTI 741 (903)
Q Consensus 687 ~ll~~l~--------~pGD~Vlv~~P~y~~~-----------------~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~ 741 (903)
.++.+++ ++||+|+++.|+|..| ...++..|++++.+|++.+ ++.+|+++|++.
T Consensus 93 ~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~ 171 (432)
T 3a9z_A 93 LVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQVEVEDILAA 171 (432)
T ss_dssp HHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSSCCHHHHHHT
T ss_pred HHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCCcCHHHHHHh
Confidence 9998886 5899999999999765 3445567999999998752 457899999999
Q ss_pred hhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCC----------cEEEEecCCCCCccCCCCCCCCchhhhhhhh
Q 043334 742 LETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYG----------ARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL 811 (903)
Q Consensus 742 l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~----------i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l 811 (903)
+++++ ++|++++|+ ||||.+++ +++|.++|++++ ++||+|++|+... .. .+ +...
T Consensus 172 i~~~~-~~v~~~~~~-nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~---~~---~~----~~~~ 236 (432)
T 3a9z_A 172 VRPTT-CLVTIMLAN-NETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK---RR---VD----VEDL 236 (432)
T ss_dssp CCTTE-EEEECCSBC-TTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT---SC---CC----HHHH
T ss_pred ccCCc-eEEEEECcc-cCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC---cc---cC----hhhc
Confidence 98765 589999998 99999999 567888889998 9999999996421 11 11 1111
Q ss_pred ccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH-HHHHHhC---------CCCCCCcHHHHHHHHHHHhcccccch
Q 043334 812 YSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL-VDAFSSF---------PGLSKPHSTVRYAIKKLLGLRERKAR 881 (903)
Q Consensus 812 ~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l-i~~l~~~---------~~~~~~s~~~Q~aa~~~L~~~~~~~~ 881 (903)
. ..+++.|+||.+ |.|+||++++++ + ...+... .....++...+.++..++..
T Consensus 237 ~-------~d~~~~s~~K~~---g~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~------ 299 (432)
T 3a9z_A 237 G-------VDFLTIVGHKFY---GPRIGALYVRGV-GKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADL------ 299 (432)
T ss_dssp C-------CSEEEEEGGGTT---CCSCEEEEETTB-TTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHH------
T ss_pred C-------CCEEEEehhHhc---CCcceEEEEccc-cccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHH------
Confidence 1 235689999976 467999999876 3 2222211 11345677778777777731
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 043334 882 DLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 882 ~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
++++++++++.++++++++.
T Consensus 300 -~~~~~~~~~~~~~~~~~~l~ 319 (432)
T 3a9z_A 300 -VSENCETYEAHMRDIRDYLE 319 (432)
T ss_dssp -HHHHHHHHHHHHHHHHHHHH
T ss_pred -HHhhHHHHHHHHHHHHHHHH
Confidence 12345556666666665543
No 118
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.84 E-value=2.7e-20 Score=207.82 Aligned_cols=243 Identities=12% Similarity=0.037 Sum_probs=177.2
Q ss_pred EccCCCCCCCCcHHHHHHHHHHHHccCC-C-------CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHH
Q 043334 619 HMDVDQSFLPIPSLVKAAIFESFARQNM-S-------ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 619 dLs~g~p~~~~p~~v~~al~~al~~y~~-~-------~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
.|+.+.+. ++|+.+.+++.+.+.+... . .+..++.+.+++++++++|.+.+ +|++|+|+++++..++.
T Consensus 3 yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~i~~~~g~~~a~~~~~~ 78 (382)
T 4hvk_A 3 YFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG---TVVFTSGATEANNLAII 78 (382)
T ss_dssp BCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE---EEEEESSHHHHHHHHHH
T ss_pred eecCCCcC-CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC---eEEEECCchHHHHHHHH
Confidence 44444433 5678899999888765221 1 12345677889999999997543 89999999999999999
Q ss_pred Hhc----cCCCeEEEcCCCcHHHHHHHHH---cCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 691 CCI----LEGGTLCFPAGSNGNYVSAARF---LKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 691 ~l~----~pGD~Vlv~~P~y~~~~~~~~~---~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
+++ ++||.|+++.|+|+.+...+.. .|++++.++++. ++.+|++++++++++++ +++++++|+ ||||.+
T Consensus 79 ~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~-~~v~~~~~~-nptG~~ 154 (382)
T 4hvk_A 79 GYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDT-ILVSVQHAN-NEIGTI 154 (382)
T ss_dssp HHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCTTE-EEEECCSBC-TTTCBB
T ss_pred HhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhccCc-eEEEEECCC-CCceee
Confidence 988 9999999999999998876655 699999999974 46799999999998766 589999998 999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
++ +++|.++|+++|+ ||+|++|+. .... .+ .. .. +..+++.|+||.+|.+| +|++++
T Consensus 155 ~~---~~~i~~l~~~~~~-li~D~a~~~---~~~~---~~----~~---~~----~~d~~~~s~~K~~g~~g--~g~~~~ 211 (382)
T 4hvk_A 155 QP---VEEISEVLAGKAA-LHIDATASV---GQIE---VD----VE---KI----GADMLTISSNDIYGPKG--VGALWI 211 (382)
T ss_dssp CC---HHHHHHHHSSSSE-EEEECTTTB---TTBC---CC----HH---HH----TCSEEEEESGGGTSCTT--CEEEEE
T ss_pred CC---HHHHHHHHHHcCE-EEEEhHHhc---CCCC---CC----ch---hc----CCCEEEEeHHHhcCCCc--eEEEEE
Confidence 99 7789999999999 999999852 1111 11 11 11 25789999999887666 788887
Q ss_pred CcHHHHHHHHhCC---------CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 844 NHPQLVDAFSSFP---------GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 844 ~~~~li~~l~~~~---------~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+++ . .+.... ....++...+.++..++. . ..++++++++.++++++.+.
T Consensus 212 ~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~--~-----~~~~~~~~~~~~~~~~~~l~ 269 (382)
T 4hvk_A 212 RKE-A--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAE--I-----TAMEWREEAERLRRLRDRII 269 (382)
T ss_dssp ETT-C--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH--H-----HHHHHHHHHHHHHHHHHHHH
T ss_pred cCc-c--CcCcccccCCCcCccccCCcCHHHHHHHHHHHH--H-----HHhhHHHHHHHHHHHHHHHH
Confidence 765 2 111111 023346666766666663 1 12456667777777776654
No 119
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.84 E-value=7.6e-20 Score=205.99 Aligned_cols=246 Identities=10% Similarity=0.012 Sum_probs=174.4
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCC
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEG 696 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pG 696 (903)
.+.|+.+.+ .++|+.+++++.+.+.. ....+..+..+.+++.+++++|.+. + +|++|+|+++++..++.+++++|
T Consensus 9 ~~yl~~~~~-~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~--~-~v~~t~g~t~a~~~~~~~~~~~g 83 (392)
T 2z9v_A 9 PVITLTAGP-VNAYPEVLRGLGRTVLY-DYDPAFQLLYEKVVDKAQKAMRLSN--K-PVILHGEPVLGLEAAAASLISPD 83 (392)
T ss_dssp CSEECSSSC-CCCCHHHHHHTTSCCCC-TTSHHHHHHHHHHHHHHHHHTTCSS--C-CEEESSCTHHHHHHHHHHHCCTT
T ss_pred cceeecCCC-cCCCHHHHHHHhccccc-cccHHHHHHHHHHHHHHHHHhCCCC--C-EEEEeCCchHHHHHHHHHhcCCC
Confidence 355655543 35678888877665432 1111223445677888888888753 3 89999999999999999999999
Q ss_pred CeEEEcCCCcHHH--HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh--cCCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 697 GTLCFPAGSNGNY--VSAARFLKANIVNIPTESEVGFKMTEKTLVTILE--TVKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 697 D~Vlv~~P~y~~~--~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~--~~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
|+|+++.|+|+.+ ...++..|++++.++++. ++.+|++++++.++ +++ ++|++++|+ ||||.+++ +++|
T Consensus 84 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~-~~v~~~~~~-nptG~~~~---l~~i 156 (392)
T 2z9v_A 84 DVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEI-TVVSVCHHD-TPSGTINP---IDAI 156 (392)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTC-CEEEEESEE-GGGTEECC---HHHH
T ss_pred CEEEEecCCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCC-cEEEEeccC-CCCceecc---HHHH
Confidence 9999999999876 344566899999999875 34689999999985 344 589999998 99999998 7799
Q ss_pred HHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceeeEEEeCcHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~~~~~li~~ 851 (903)
.++|+++|++||+|++|+. .... .+ +. .. +..++++|+||.+ |.+|+ ||++++++ +++.
T Consensus 157 ~~l~~~~~~~li~D~a~~~---g~~~---~~----~~---~~----~~d~~~~s~sK~~~~~~g~--G~l~~~~~-~~~~ 216 (392)
T 2z9v_A 157 GALVSAHGAYLIVDAVSSF---GGMK---TH----PE---DC----KADIYVTGPNKCLGAPPGL--TMMGVSER-AWAK 216 (392)
T ss_dssp HHHHHHTTCEEEEECTTTB---TTBS---CC----GG---GG----TCSEEEECSSSTTCCCSCC--EEEEECHH-HHHH
T ss_pred HHHHHHcCCeEEEEccccc---CCcc---cc----cc---cc----cceEEEecCcccccCCCce--eEEEECHH-HHHH
Confidence 9999999999999999962 2111 11 11 11 2568999999954 45664 99999987 8888
Q ss_pred HHhCC---------------------C-CCCCcHHHHHHHHHHHhcccccchhHHHH-HHHHHHHHHHHHHHH
Q 043334 852 FSSFP---------------------G-LSKPHSTVRYAIKKLLGLRERKARDLMNA-VAEHIRNLESRSKRL 901 (903)
Q Consensus 852 l~~~~---------------------~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~-l~~~r~~y~~Rr~~l 901 (903)
+.... . ...++...+.++..+++. +.++ ++++++.++++++.+
T Consensus 217 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-------~~~~g~~~~~~~~~~~~~~l 282 (392)
T 2z9v_A 217 MKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDL-------YLNEGPEAVWARHALTAKAM 282 (392)
T ss_dssp HHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHH-------HHHHCHHHHHHHHHHHHHHH
T ss_pred hhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH-------HHhccHHHHHHHHHHHHHHH
Confidence 76421 1 234455666666666631 1222 455556666666554
No 120
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.84 E-value=1.7e-20 Score=211.82 Aligned_cols=233 Identities=10% Similarity=0.028 Sum_probs=175.0
Q ss_pred CCCCCeEEccCCCCCCC---CcHHHHHHHHHHHHccCC--CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQSFLP---IPSLVKAAIFESFARQNM--SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~~~---~p~~v~~al~~al~~y~~--~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..+...+|++.+.+..+ .++.+.+++.+.+..+.. ..+..+.++++++++++.+| ++ ++++++|+++++.
T Consensus 33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g----~~-~v~~~~~gt~a~~ 107 (392)
T 3ruy_A 33 PEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN----KE-MVLPMNTGAEAVE 107 (392)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT----CS-EEEEESSHHHHHH
T ss_pred CCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC----CC-EEEEeCcHHHHHH
Confidence 35677899987765544 578899999998866432 23456778889999998887 23 8999999999999
Q ss_pred HHHHHhccC----------CCeEEEcCCCcHHHHHHHHHcCCE-------------EEEecCCCCCCcccCHHHHHHHhh
Q 043334 687 KLVLCCILE----------GGTLCFPAGSNGNYVSAARFLKAN-------------IVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 687 ~ll~~l~~p----------GD~Vlv~~P~y~~~~~~~~~~G~~-------------vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
.++..+..+ ||.|+++.|+|..+...+...+.. +..++. .|+++++++++
T Consensus 108 ~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 180 (392)
T 3ruy_A 108 TAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAIT 180 (392)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCC
T ss_pred HHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHHHhc
Confidence 999887655 679999999997665555444322 444443 27999999998
Q ss_pred cCCCcEEEEECCCCCCcccCCCHHH-HHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 744 TVKKPWVYISGPTINPTGLLYSNKE-IENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v~s~ee-l~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
+++ ++|++++|+ ||||.+++.++ +++|.++|+++|++||+||+|.++.+.+... . .......+ .+
T Consensus 181 ~~~-~~v~~~~~~-nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~---~----~~~~~~~~----d~- 246 (392)
T 3ruy_A 181 PNT-AAFILEPIQ-GEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF---A----CDWDNVTP----DM- 246 (392)
T ss_dssp TTE-EEEEECSSB-STTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS---G----GGGGTCCC----SE-
T ss_pred cCe-EEEEEeCcc-CCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch---h----hhccCCCC----CE-
Confidence 655 589999997 99999996555 9999999999999999999998776665432 1 11111111 23
Q ss_pred EEccCchhccccc-ceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 823 LLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 823 ~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
.||||.++ +| +|+||++++++ +++.+..... ..+.+.+.|.++..+|+
T Consensus 247 --~~~SK~l~-gG~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 297 (392)
T 3ruy_A 247 --YILGKALG-GGVFPISCAAANRD-ILGVFEPGSHGSTFGGNPLACAVSIAALE 297 (392)
T ss_dssp --EEECGGGG-TTTSCCEEEEECHH-HHTTCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred --EEEchhhh-CChhhhEEEEECHH-HHhhhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 37799875 36 99999999887 8877765443 67788999999999984
No 121
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.84 E-value=3.1e-20 Score=209.98 Aligned_cols=263 Identities=9% Similarity=0.007 Sum_probs=180.7
Q ss_pred CCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCC-CC-CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 613 PNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNM-SE-SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 613 ~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~-~~-G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
.+...+|++.|. ++++ +++.+.+++.+.+..+.. .. ...+.++.+++.+++++|... + +|++|+|+++++..
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~-~v~~~~gg~~a~~~ 119 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPEL--N-RVFPVNSGTEANEA 119 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTE--E-EEEEESSHHHHHHH
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCc--C-EEEEcCcHHHHHHH
Confidence 456788998875 4554 788999999998876432 11 135678889999999887643 3 89999999999999
Q ss_pred HHHHhc--cCCCeEEEcCCCcHH-HHHHHHHcCCEEEE---ecCCCCCC-c-ccCHHHHHHHhhcCCCcEEEEECCCCCC
Q 043334 688 LVLCCI--LEGGTLCFPAGSNGN-YVSAARFLKANIVN---IPTESEVG-F-KMTEKTLVTILETVKKPWVYISGPTINP 759 (903)
Q Consensus 688 ll~~l~--~pGD~Vlv~~P~y~~-~~~~~~~~G~~vv~---v~~~~~~~-f-~ld~~~L~~~l~~~~~~~vil~~P~~NP 759 (903)
++.++. .+||.|++++|+|.. +...+...|.+++. +|+..+.. + ..|++++++.+++++ ++|+ ++|++||
T Consensus 120 al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~-~~v~-~~~~~~~ 197 (395)
T 1vef_A 120 ALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEET-AAVI-LEPVQGE 197 (395)
T ss_dssp HHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTE-EEEE-ECSEETT
T ss_pred HHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCE-EEEE-EeCccCC
Confidence 988764 688999999999864 45566667765221 12111000 0 148999999987654 3554 5555589
Q ss_pred cccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccccee
Q 043334 760 TGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF 838 (903)
Q Consensus 760 TG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi 838 (903)
||.++ +.+++++|.++|+++|++||+||+|.++.+.+... . +......+ .++ ||||.++. |+|+
T Consensus 198 tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~---~----~~~~~~~~----d~~---s~sK~~~~-g~~~ 262 (395)
T 1vef_A 198 GGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF---A----FEHFGIVP----DIL---TLAKALGG-GVPL 262 (395)
T ss_dssp TTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---T----HHHHTCCC----SEE---EECGGGGT-TSSC
T ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh---H----hhhcCCCC----CEE---EEcccccC-CCce
Confidence 99875 78899999999999999999999998654444321 1 11111111 222 88999985 9999
Q ss_pred eEEEeCcHHHHHHHHhC--CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 839 GFLVLNHPQLVDAFSSF--PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 839 G~lv~~~~~li~~l~~~--~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
||++++++ +++.+... ....+++.+.|.++..+|+.-.. +.+.+++.+.++.+.++.
T Consensus 263 G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~l~~~l 321 (395)
T 1vef_A 263 GVAVMREE-VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKL 321 (395)
T ss_dssp EEEEEEHH-HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHH
T ss_pred EEEEehHH-HHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence 99999987 88877652 23566788899888888842111 123344455555554443
No 122
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.84 E-value=5.3e-20 Score=203.38 Aligned_cols=239 Identities=14% Similarity=0.081 Sum_probs=173.2
Q ss_pred CCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCC
Q 043334 626 FLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGS 705 (903)
Q Consensus 626 ~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~ 705 (903)
+.++|+.+.+++.+.+..+ ......+..+.+++++++++|.+.+++ +|++|+|+++++..++.++++ |+|++++|+
T Consensus 8 p~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~g~~~~~~-~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~ 83 (353)
T 2yrr_A 8 PTPIPERVQKALLRPMRGH-LDPEVLRVNRAIQERLAALFDPGEGAL-VAALAGSGSLGMEAGLANLDR--GPVLVLVNG 83 (353)
T ss_dssp SCCCCHHHHGGGGSCCCCT-TCHHHHHHHHHHHHHHHHHHCCCTTCE-EEEESSCHHHHHHHHHHTCSC--CCEEEEECS
T ss_pred CCCCCHHHHHHHhcccccc-cCHHHHHHHHHHHHHHHHHhCCCCCCc-eEEEcCCcHHHHHHHHHHhcC--CcEEEEcCC
Confidence 4567888888876654331 111123446778888888888864444 899999999999999988876 899999999
Q ss_pred cHHH--HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcE
Q 043334 706 NGNY--VSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGAR 782 (903)
Q Consensus 706 y~~~--~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~ 782 (903)
|+.+ ...++..|++++.++++. ++.+|++++++.+++ ++ ++|++++|+ ||||.+++ +++|.++|+++|++
T Consensus 84 ~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~-~~v~~~~~~-nptG~~~~---~~~i~~l~~~~~~~ 156 (353)
T 2yrr_A 84 AFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRY-RMVALVHGE-TSTGVLNP---AEAIGALAKEAGAL 156 (353)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCC-SEEEEESEE-TTTTEECC---HHHHHHHHHHHTCE
T ss_pred CchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCC-CEEEEEccC-CCcceecC---HHHHHHHHHHcCCe
Confidence 9875 455678999999999964 467999999999987 55 589999998 99999999 67899999999999
Q ss_pred EEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceeeEEEeCcHHHHHHHHh-------
Q 043334 783 VVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGFLVLNHPQLVDAFSS------- 854 (903)
Q Consensus 783 VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~~~~~li~~l~~------- 854 (903)
||+|++|+. .... .+ +..+ +..+++.|++|.+ +.+| +||++++++ +++.+..
T Consensus 157 li~D~a~~~---~~~~---~~----~~~~-------~~d~~~~s~~K~~~~~~g--~G~~~~~~~-~~~~l~~~~~~~~~ 216 (353)
T 2yrr_A 157 FFLDAVTTL---GMLP---FS----MRAM-------GVDYAFTGSQKCLSAPPG--LAPIAASLE-ARKAFTGKRGWYLD 216 (353)
T ss_dssp EEEECTTTT---TTSC---CC----HHHH-------TCSEEECCTTSTTCCCSS--CEEEEECHH-HHHHCCCCSCSTTC
T ss_pred EEEEcCccc---cccc---cc----cccc-------CceEEEecCcccccCCCc--eEEEEECHH-HHHHhccCCCcccc
Confidence 999999952 2211 11 1211 1367889999955 5566 699999987 7776641
Q ss_pred ----------CCCCCCCcHHHHHHHHHHHhcccccchhHHHH-HHHHHHHHHHHHHHHh
Q 043334 855 ----------FPGLSKPHSTVRYAIKKLLGLRERKARDLMNA-VAEHIRNLESRSKRLK 902 (903)
Q Consensus 855 ----------~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~-l~~~r~~y~~Rr~~l~ 902 (903)
.....+++...+.++..+++. +.++ ++++++.++++++.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~~~l~ 268 (353)
T 2yrr_A 217 LARVAEHWERGGYHHTTPVLLHYALLEALDL-------VLEEGVAARERRAREVYAWVL 268 (353)
T ss_dssp HHHHHHHHTTCCCSSCCCHHHHHHHHHHHHH-------HHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhcCCCCCCCCHHHHHHHHHHHHH-------HHHhhHHHHHHHHHHHHHHHH
Confidence 112345677777777777731 1122 4556666666666553
No 123
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.84 E-value=1.2e-19 Score=207.56 Aligned_cols=207 Identities=10% Similarity=0.035 Sum_probs=163.4
Q ss_pred CCCCeE--EccCCCCCCCCcHHHHHHHHHHHHc--cCC-CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 613 PNSGLI--HMDVDQSFLPIPSLVKAAIFESFAR--QNM-SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 613 ~~~~~I--dLs~g~p~~~~p~~v~~al~~al~~--y~~-~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
.|.+++ +|+.|+|++++|+.+.+++.+.+.. |.. ..+..++++++++++ |. + ++++|+|+++++..
T Consensus 12 gg~~~~~~~l~~~~p~~~~p~~~~~a~~~~~~~~~y~~~~~~~~~l~~~la~~~----~~--~---~v~~~~ggt~al~~ 82 (424)
T 2po3_A 12 GGPAAFDQPLLVGRPNRIDRARLYERLDRALDSQWLSNGGPLVREFEERVAGLA----GV--R---HAVATCNATAGLQL 82 (424)
T ss_dssp TCCCSCSSCEETTCCCCCCHHHHHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHH----TS--S---EEEEESCHHHHHHH
T ss_pred cCCccccccccccCCCCCChHHHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHh----CC--C---eEEEeCCHHHHHHH
Confidence 444444 6899999999999999999888764 322 234555666666554 43 2 79999999999999
Q ss_pred HHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHH
Q 043334 688 LVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNK 767 (903)
Q Consensus 688 ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~e 767 (903)
++.++. +||+|++++|+|+.+...++..|++++.+++++ ++|.+|++++++.+++++ ++|+++ ||||...+
T Consensus 83 ~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~-~~v~~~----~~tG~~~~-- 153 (424)
T 2po3_A 83 LAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRT-SAVVGV----HLWGRPCA-- 153 (424)
T ss_dssp HHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTE-EEEEEE----CGGGCCCC--
T ss_pred HHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCC-cEEEEE----CCCCCcCC--
Confidence 998885 799999999999999999999999999999975 468899999999987655 467664 68898755
Q ss_pred HHHHHHHHHHhCCcEEEEecCCC-CCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 768 EIENILTVCAKYGARVVIDTAFS-GLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 768 el~eI~~ia~k~~i~VI~DeaY~-~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
+++|.++|+++|++||+|++|+ ++.|++.. +. ..+ .+++.||||..+++|+|+||++++++
T Consensus 154 -l~~i~~la~~~~~~li~Dea~~~g~~~~~~~---------~~---~~~-----di~~~S~sk~K~l~~~~~G~~v~~~~ 215 (424)
T 2po3_A 154 -ADQLRKVADEHGLRLYFDAAHALGCAVDGRP---------AG---SLG-----DAEVFSFHATKAVNAFEGGAVVTDDA 215 (424)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---------TT---SSS-----SEEEEECCTTSSSCCSSCEEEEESCH
T ss_pred -HHHHHHHHHHcCCEEEEECccccCCeECCee---------cc---ccc-----CEEEEeCCCCCCccCCCCeEEEeCCH
Confidence 8899999999999999999998 46665432 11 111 28999999777778899999999954
Q ss_pred HHHHHHHhC
Q 043334 847 QLVDAFSSF 855 (903)
Q Consensus 847 ~li~~l~~~ 855 (903)
++++.+...
T Consensus 216 ~l~~~l~~~ 224 (424)
T 2po3_A 216 DLAARIRAL 224 (424)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 488887654
No 124
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.84 E-value=3.2e-20 Score=206.23 Aligned_cols=249 Identities=13% Similarity=0.137 Sum_probs=174.8
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCc-h-HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESE-I-DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI 693 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~-~-~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~ 693 (903)
++++|+.| | .++++.+.+++.+.+. ...+. . +..+.+++.+++++|.+.+++ ++++|+|+++++..++.+++
T Consensus 4 ~~~~~~~g-p-~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~l~~~la~~~g~~~~~~-~v~~~~g~t~a~~~~~~~~~ 77 (366)
T 1m32_A 4 NYLLLTPG-P-LTTSRTVKEAMLFDSC---TWDDDYNIGVVEQIRQQLTALATASEGYT-SVLLQGSGSYAVEAVLGSAL 77 (366)
T ss_dssp -CEECSSS-S-CCCCHHHHHTTCCCCC---TTSHHHHTTTHHHHHHHHHHHHCSSSSEE-EEEEESCHHHHHHHHHHHSC
T ss_pred ccccccCC-C-cCCCHHHHHHHhhhhc---CCCHHHHHHHHHHHHHHHHHHhCCCCcCc-EEEEecChHHHHHHHHHHhc
Confidence 36889888 3 4578888888766431 11111 1 334455555556667333333 79999999999999999999
Q ss_pred cCCCeEEEcC-CCcHH-HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC-CCcEEEEECCCCCCcccCCCHHHHH
Q 043334 694 LEGGTLCFPA-GSNGN-YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETV-KKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 694 ~pGD~Vlv~~-P~y~~-~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++||.|++++ ++|+. +...++..|++++.++++. ++.+|++++++.+++. ..+++++++|+ ||||.+++ ++
T Consensus 78 ~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~-nptG~~~~---l~ 151 (366)
T 1m32_A 78 GPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSE-TTTGMLNP---ID 151 (366)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEE-TTTTEECC---HH
T ss_pred CCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEeccc-CCcceecC---HH
Confidence 9999988776 66664 6777888999999999864 4668999999999864 23588899998 99999999 78
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
+|.++|+++|++||+||+|+.... +. + +... +.+++++|+||.++. +.++||++++++ +++
T Consensus 152 ~i~~l~~~~~~~li~Dea~~~~~~---~~---~-------~~~~----~~di~~~s~~K~~~~-~~g~G~~~~~~~-~~~ 212 (366)
T 1m32_A 152 EVGALAHRYGKTYIVDAMSSFGGI---PM---D-------IAAL----HIDYLISSANKCIQG-VPGFAFVIAREQ-KLA 212 (366)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTS---CC---C-------TTTT----TCSEEEEESSSTTCC-CSSEEEEEEEHH-HHT
T ss_pred HHHHHHHHcCCEEEEECCccccCc---Cc---c-------cccc----CccEEEecCcccccC-CCceEEEEECHH-HHH
Confidence 999999999999999999963221 11 1 1111 357899999997732 334699999987 777
Q ss_pred HHHhCC------------------C--CCCCcHHHHHHHHHHHhcccccchhHHHH--HHHHHHHHHHHHHHHh
Q 043334 851 AFSSFP------------------G--LSKPHSTVRYAIKKLLGLRERKARDLMNA--VAEHIRNLESRSKRLK 902 (903)
Q Consensus 851 ~l~~~~------------------~--~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~--l~~~r~~y~~Rr~~l~ 902 (903)
.+.... . ..+++...+.++..+|+. +.++ ++++++.++++++.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-------~~~~g~~~~~~~~~~~~~~~l~ 279 (366)
T 1m32_A 213 ACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKE-------LAKEGGVAARHQRYQQNQRSLV 279 (366)
T ss_dssp TCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHH-------HHHccCHhHHHHHHHHHHHHHH
Confidence 665421 1 245667777777777731 1222 4556666666666553
No 125
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.84 E-value=4.1e-20 Score=204.67 Aligned_cols=236 Identities=12% Similarity=0.050 Sum_probs=168.5
Q ss_pred CCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCC
Q 043334 626 FLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGS 705 (903)
Q Consensus 626 ~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~ 705 (903)
+.++++.+++++.+.+.. ...++..+..+.+++.+++++|.+. + ++++|+|+++++..++.+++++||+|++++|+
T Consensus 9 p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~--~-~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~ 84 (352)
T 1iug_A 9 PVRLHPKALEALARPQLH-HRTEAAREVFLKARGLLREAFRTEG--E-VLILTGSGTLAMEALVKNLFAPGERVLVPVYG 84 (352)
T ss_dssp SCCCCHHHHHHHHSCCCC-TTSHHHHHHHHHHHHHHHHHHTCSS--E-EEEEESCHHHHHHHHHHHHCCTTCEEEEEECS
T ss_pred CCCCCHHHHHHhccCCCC-ccCHHHHHHHHHHHHHHHHHhCCCC--c-eEEEcCchHHHHHHHHHhccCCCCeEEEEeCC
Confidence 356788888888776532 1112223345677777888888763 3 89999999999999999999999999999999
Q ss_pred cHHHH--HHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhC--Cc
Q 043334 706 NGNYV--SAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKY--GA 781 (903)
Q Consensus 706 y~~~~--~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~--~i 781 (903)
|+++. ..++..|++++.++++. ++.+|++++++ +++ ++|++++|+ ||||.+++ +++|.++|+++ |+
T Consensus 85 ~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~-~~v~~~~~~-nptG~~~~---l~~i~~l~~~~~~~~ 154 (352)
T 1iug_A 85 KFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGY-AGLLLVHSE-TSTGALAD---LPALARAFKEKNPEG 154 (352)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSC-SEEEEESEE-TTTTEECC---HHHHHHHHHHHCTTC
T ss_pred chhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCC-cEEEEEEec-CCcceecC---HHHHHHHHHhhCCCC
Confidence 99975 44566899999999864 45678888766 445 589999998 99999999 78899999999 99
Q ss_pred EEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceeeEEEeCcHHHHHH---------
Q 043334 782 RVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGFLVLNHPQLVDA--------- 851 (903)
Q Consensus 782 ~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~~~~~li~~--------- 851 (903)
+||+|++|+ ++.... . +. .. +..+++.|+||.+ +.+| +||++++++ +++.
T Consensus 155 ~li~D~a~~---~~~~~~---~----~~---~~----~~d~~~~s~~K~~~~~~g--~G~~~~~~~-~~~~~~~~~~~~~ 214 (352)
T 1iug_A 155 LVGADMVTS---LLVGEV---A----LE---AM----GVDAAASGSQKGLMCPPG--LGFVALSPR-ALERLKPRGYYLD 214 (352)
T ss_dssp EEEEECTTT---BTTBCC---C----SG---GG----TCSEEEEESSSTTCCCSC--EEEEEECHH-HHHTCCCCSSTTC
T ss_pred EEEEECCcc---ccCcce---e----cc---cc----CeeEEEecCcccccCCCc--eeEEEECHH-HHHHhhCCCceee
Confidence 999999995 222111 1 11 11 2568899999944 4444 799999887 6544
Q ss_pred HH-------hCCCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 852 FS-------SFPGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 852 l~-------~~~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
+. .......++...+.++..+++.. .++++++++.++++++.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-------~~~~~~~~~~~~~~~~~l~ 265 (352)
T 1iug_A 215 LARELKAQKEGESAWTPAINLVLAVAAVLEEV-------LPRLEEHLALKAWQNALLY 265 (352)
T ss_dssp HHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH-------GGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccCCCCCCCCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 11 11224566777788777777411 1224556666666666553
No 126
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.83 E-value=2.6e-20 Score=216.29 Aligned_cols=222 Identities=10% Similarity=0.055 Sum_probs=169.6
Q ss_pred CeEEccCC-CCCCCCcHHHHHHHHHH----HHc--cCC-CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 616 GLIHMDVD-QSFLPIPSLVKAAIFES----FAR--QNM-SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 616 ~~IdLs~g-~p~~~~p~~v~~al~~a----l~~--y~~-~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
++|+++.| ++++++|+.+.++.... ... +.+ ..|.+ .++++++++++.+|.+ ++++++|+++++..
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~-~~~~l~~~la~~~g~~-----~~i~~~sGt~al~~ 163 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNP-TRDALESLLAKLDKAD-----RAFCFTSGMAALSA 163 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCH-HHHHHHHHHHHHHTCS-----EEEEESSHHHHHHH
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCH-HHHHHHHHHHHHhCCC-----eEEEECCHHHHHHH
Confidence 46788887 77777777666655432 111 111 34555 7999999999999863 35555555778888
Q ss_pred HHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccC
Q 043334 688 LVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 688 ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v 763 (903)
++. ++++||+|++++|+|+.+... ++..|++++.++++ |++++++++++++ ++|++++|+ ||||.+
T Consensus 164 ~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~t-k~v~l~~p~-NptG~v 233 (464)
T 1ibj_A 164 VTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQT-KLVWLESPT-NPRQQI 233 (464)
T ss_dssp HHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSE-EEEEECSSC-TTTCCC
T ss_pred HHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCc-eEEEEeCCC-CCCCEe
Confidence 775 789999999999999999764 46689999999873 7899999998766 599999998 999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc-cceeeEEE
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG-ALKFGFLV 842 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~-GlRiG~lv 842 (903)
++ +++|.++|+++|++||+||+|.. +... + .+. . +++++++|+||.++.+ |+|+||++
T Consensus 234 ~~---l~~i~~la~~~gi~livDea~~~----g~~~---~---~~~----~----~~div~~S~sK~~~g~~Gl~~G~l~ 292 (464)
T 1ibj_A 234 SD---IRKISEMAHAQGALVLVDNSIMS----PVLS---R---PLE----L----GADIVMHSATKFIAGHSDVMAGVLA 292 (464)
T ss_dssp CC---HHHHHHHHHTTTCEEEEECTTTC----TTTC---C---GGG----T----TCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred ec---HHHHHHHHHHcCCEEEEECCCcc----cccC---C---hhh----c----CCEEEEECCcccccCCCCCcEEEEE
Confidence 97 89999999999999999999953 1111 0 111 1 3689999999999754 99999999
Q ss_pred eCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 843 LNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 843 ~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
++++++++.+..... ..+.+.+.|+++...|.
T Consensus 293 ~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~ 326 (464)
T 1ibj_A 293 VKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIK 326 (464)
T ss_dssp ECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHT
T ss_pred EChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchh
Confidence 997448888876552 45567888998888873
No 127
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.83 E-value=1.7e-19 Score=204.18 Aligned_cols=202 Identities=12% Similarity=0.077 Sum_probs=157.1
Q ss_pred CCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCC
Q 043334 626 FLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGS 705 (903)
Q Consensus 626 ~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~ 705 (903)
+.++++.+.+++.+.+.. .......++.+.+++++++.+|.+.. + .+++|+|+++++..++.+++++||+|+++.|+
T Consensus 21 p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~-~-~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~ 97 (411)
T 3nnk_A 21 PINADPRVLRAMSSQLIG-QYDPAMTHYMNEVMALYRGVFRTENR-W-TMLVDGTSRAGIEAILVSAIRPGDKVLVPVFG 97 (411)
T ss_dssp CCCCCHHHHHHHTSCCCC-TTCHHHHHHHHHHHHHHHHHHTCCCS-E-EEEEESCHHHHHHHHHHHHCCTTCEEEEEECS
T ss_pred CCCCCHHHHHHhhccccc-cccHHHHHHHHHHHHHHHHHhCCCCC-c-EEEECCCcHHHHHHHHHHhcCCCCEEEEecCC
Confidence 455678887776653211 11223345678888999999998743 1 48888999999999999999999999999999
Q ss_pred cHH--HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcE
Q 043334 706 NGN--YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGAR 782 (903)
Q Consensus 706 y~~--~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~ 782 (903)
|.+ +...++..|++++.+|++. ++.+|++++++++++ ++ ++|++++|+ ||||.+++ +++|.++|+++|++
T Consensus 98 ~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~-~~v~~~~~~-nptG~~~~---l~~i~~l~~~~~~~ 170 (411)
T 3nnk_A 98 RFGHLLCEIARRCRAEVHTIEVPW--GEVFTPDQVEDAVKRIRP-RLLLTVQGD-TSTTMLQP---LAELGEICRRYDAL 170 (411)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCC-SEEEEESEE-TTTTEECC---CTTHHHHHHHHTCE
T ss_pred chHHHHHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHhhCCC-eEEEEeCCC-CCcceecc---HHHHHHHHHHcCCE
Confidence 977 8889999999999999853 567899999999986 55 599999997 99999998 78899999999999
Q ss_pred EEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC
Q 043334 783 VVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 783 VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~ 856 (903)
||+|++++. ..... . +... +..+++.|+||.++ .+.++||++++++ +++.+....
T Consensus 171 li~Dea~~~---~~~~~---~-------~~~~----~~d~~~~s~~K~l~-~~~g~g~~~~~~~-~~~~~~~~~ 225 (411)
T 3nnk_A 171 FYTDATASL---GGNPL---E-------TDVW----GLDAVSAGMQKCLG-GPSGTSPITLSAR-MEEAIRRRK 225 (411)
T ss_dssp EEEECTTTB---TTBCC---C-------TTTT----TCSEEECCSTTTTC-CCSSEEEEEECHH-HHHHHHTTC
T ss_pred EEEECCccc---CCccc---c-------hhcc----CCcEEEecCccccC-CCCceEEEEECHH-HHHHHhhcc
Confidence 999999853 11110 0 1111 35789999999853 3346899999987 888887653
No 128
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.83 E-value=1.9e-19 Score=201.64 Aligned_cols=208 Identities=13% Similarity=0.097 Sum_probs=159.1
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCC
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEG 696 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pG 696 (903)
..+|+-| +.++|+.+++++.+.+.. ....+..++.+++++++++.+|.+.+.+ .+++|+|+++++..++.+++++|
T Consensus 20 ~~~~~pg--p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~g~~~~~~-~i~~~~ggt~al~~~~~~~~~~g 95 (376)
T 3f0h_A 20 MLNFTVG--PVMSSEEVRAIGAEQVPY-FRTTEFSSTMLENEKFMLEYAKAPEGSK-AVFMTCSSTGSMEAVVMNCFTKK 95 (376)
T ss_dssp CEECSSS--SCCCCHHHHHHHTSCCCC-CSSHHHHHHHHHHHHHHHHHHTCCTTCE-EEEESSCHHHHHHHHHHHHCCTT
T ss_pred ceeecCC--CCCCcHHHHHHhcCCCCC-CCCHHHHHHHHHHHHHHHHHhCCCCCce-EEEEcCChhHHHHHHHHhccCCC
Confidence 4455444 356788888877664322 1122344677889999999999875423 56669999999999999999999
Q ss_pred CeEEEcCCCcHHHH--HHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHH
Q 043334 697 GTLCFPAGSNGNYV--SAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILT 774 (903)
Q Consensus 697 D~Vlv~~P~y~~~~--~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ 774 (903)
|+|+++.|+|.++. ..+...|++++.++.+. ++.+|++++++.+++++ +++++++|+ ||||.+++ +++|.+
T Consensus 96 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~-~~v~~~~~~-nptG~~~~---l~~i~~ 168 (376)
T 3f0h_A 96 DKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEH--GKKLTKEKLYEYDNQNF-TGLLVNVDE-TSTAVLYD---TMMIGE 168 (376)
T ss_dssp CCEEEEESSHHHHHHHHHHHHTTCCEEEEECCT--TCCCCHHHHHTTTTSCC-CEEEEESEE-TTTTEECC---HHHHHH
T ss_pred CeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHhhccCc-eEEEEeccc-CCcceecC---HHHHHH
Confidence 99999999776644 34677899999999864 57799999999887766 589999998 99999999 889999
Q ss_pred HHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcc-cccceeeEEEeCcHHHHHHHH
Q 043334 775 VCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKML-TGALKFGFLVLNHPQLVDAFS 853 (903)
Q Consensus 775 ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g-~~GlRiG~lv~~~~~li~~l~ 853 (903)
+|+++|++||+|++|+.... .. . .. .. +..+++.|+||.++ .+| +|+++++++ +++.+.
T Consensus 169 l~~~~~~~li~D~~~~~~~~---~~---~----~~---~~----~~d~~~~s~~K~l~~~~G--~g~~~~~~~-~~~~~~ 228 (376)
T 3f0h_A 169 FCKKNNMFFVCDCVSAFLAD---PF---N----MN---EC----GADVMITGSQKVLACPPG--ISVIVLAPR-GVERVE 228 (376)
T ss_dssp HHHHTTCEEEEECTTTTTTS---CC---C----HH---HH----TCSEEEEETTTTTCCCSS--CEEEEECHH-HHHHHH
T ss_pred HHHHcCCEEEEEcCccccCc---cc---c----cc---cc----CccEEEecCcccccCCCc--eEEEEECHH-HHHHhh
Confidence 99999999999999864321 10 1 11 11 24689999999998 666 688888887 888887
Q ss_pred hC
Q 043334 854 SF 855 (903)
Q Consensus 854 ~~ 855 (903)
..
T Consensus 229 ~~ 230 (376)
T 3f0h_A 229 KS 230 (376)
T ss_dssp TC
T ss_pred cC
Confidence 53
No 129
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.83 E-value=4.4e-20 Score=204.69 Aligned_cols=216 Identities=16% Similarity=0.102 Sum_probs=163.0
Q ss_pred CCCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh
Q 043334 613 PNSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC 692 (903)
Q Consensus 613 ~~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l 692 (903)
..+++|||+.+.+ .++++.+++++.+....|...+|..+.++++++++++++| + . . +|++|+|+++++..++.++
T Consensus 5 ~~~~~id~~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~-~-~-~v~~~~~gt~a~~~al~~~ 79 (356)
T 1v72_A 5 SRPPALGFSSDNI-AGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFE-R-D-V-EVFLVPTGTAANALCLSAM 79 (356)
T ss_dssp -CCCCCBCSCGGG-CCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHT-S-C-C-EEEEESCHHHHHHHHHHTS
T ss_pred CCCceEeeccCCc-cCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhC-C-C-C-cEEEeCCccHHHHHHHHHh
Confidence 3457899998754 4578889999888754334456667788999999999998 3 2 2 6999999999999999999
Q ss_pred ccCCCeEEEcCCCcHHHHHH--HHHc--CCEEEEecCCCCCCcccCHHHHHH-HhhcC------CCcEEEEECCCCCCcc
Q 043334 693 ILEGGTLCFPAGSNGNYVSA--ARFL--KANIVNIPTESEVGFKMTEKTLVT-ILETV------KKPWVYISGPTINPTG 761 (903)
Q Consensus 693 ~~pGD~Vlv~~P~y~~~~~~--~~~~--G~~vv~v~~~~~~~f~ld~~~L~~-~l~~~------~~~~vil~~P~~NPTG 761 (903)
++|||.|+++.|+|..+... +... |++++.+|.+ ++.+|++++++ .+++. ..++|++++|+ | ||
T Consensus 80 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~-tG 154 (356)
T 1v72_A 80 TPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-E-VG 154 (356)
T ss_dssp CCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-T-TS
T ss_pred cCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-C-CC
Confidence 99999999999999887655 6666 9999999874 36799999999 88751 23589999986 7 99
Q ss_pred cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCc--cCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 762 LLYSNKEIENILTVCAKYGARVVIDTAFSGLE--FNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 762 ~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~--f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
.+++.+++++|.++|+++|++||+|++|..+. +.+... ..+. +... ..+++.|+||. + .|+|
T Consensus 155 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~------~~~~-~~~~-----~d~~~~s~sK~-g---~~~G 218 (356)
T 1v72_A 155 SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSP------AEMT-WKAG-----VDALSFGATKN-G---VLAA 218 (356)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCT------TTTT-GGGT-----CCEEEECCGGG-T---CSSC
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCH------HHhh-hhhc-----CCEEEEecccC-C---CcCc
Confidence 99999999999999999999999999996422 222221 0010 1111 12345699997 3 3677
Q ss_pred --EEEeCcHHHHHHHHhC
Q 043334 840 --FLVLNHPQLVDAFSSF 855 (903)
Q Consensus 840 --~lv~~~~~li~~l~~~ 855 (903)
|++++++ +++.+...
T Consensus 219 ~g~~~~~~~-~~~~~~~~ 235 (356)
T 1v72_A 219 EAIVLFNTS-LATEMSYR 235 (356)
T ss_dssp EEEEESSGG-GHHHHHHH
T ss_pred cEEEEECHH-HHhhHHHH
Confidence 8888766 77776543
No 130
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.82 E-value=2.3e-19 Score=205.49 Aligned_cols=256 Identities=6% Similarity=0.001 Sum_probs=182.4
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCC--CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNM--SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~--~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..+...+|++.|. +.++ .++.+.+++.+.+.++.. ..+..++++++++.+++.+|. + +|++|+|+++++.
T Consensus 54 ~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~----~-~v~~~~ggteA~~ 128 (420)
T 2pb2_A 54 QQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFA----E-RVLFMNSGTEANE 128 (420)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSSC----S-EEEEESSHHHHHH
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC----C-eEEEeCCHHHHHH
Confidence 4567789998763 3333 578899999998866432 123457889999999998762 3 8999999999999
Q ss_pred HHHHHhcc-------CCC-eEEEcCCCcHHHH-HHHHHcCCE------------EEEecCCCCCCcccCHHHHHHHhhcC
Q 043334 687 KLVLCCIL-------EGG-TLCFPAGSNGNYV-SAARFLKAN------------IVNIPTESEVGFKMTEKTLVTILETV 745 (903)
Q Consensus 687 ~ll~~l~~-------pGD-~Vlv~~P~y~~~~-~~~~~~G~~------------vv~v~~~~~~~f~ld~~~L~~~l~~~ 745 (903)
.++.++.. +|+ .|++++|+|..+. ......|.+ +..+|. .|+++|++.++++
T Consensus 129 ~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~ 201 (420)
T 2pb2_A 129 TAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDH 201 (420)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTT
T ss_pred HHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccC
Confidence 99998876 774 9999999997654 344555543 445543 3799999999865
Q ss_pred CCcEEEEECCCCCCcc-cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEE
Q 043334 746 KKPWVYISGPTINPTG-LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLL 824 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG-~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l 824 (903)
+ ++|++++|+ ||+| .+++.+++++|.++|+++|++||+||+|.++.+.+... . .....-.+ .++
T Consensus 202 ~-~~vi~~p~~-~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~---~----~~~~~~~~----dii-- 266 (420)
T 2pb2_A 202 T-CAVVVEPIQ-GEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF---A----YMHYGVTP----DIL-- 266 (420)
T ss_dssp E-EEEEECSEE-TTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS---H----HHHHTCCC----SEE--
T ss_pred c-eEEEEeCCc-CCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH---H----HHhcCCCC----CeE--
Confidence 4 466666664 8888 46999999999999999999999999998766655431 1 12222122 233
Q ss_pred ccCchhcccccceeeEEEeCcHHHHHHHHhC--CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 825 GGLSLKMLTGALKFGFLVLNHPQLVDAFSSF--PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 825 ~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~--~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
||||.++ +|+|+||++++++ +++.+... ..+.+.+.+.|.++.++|+.-.. +.+.+.+.++++.+.++.+
T Consensus 267 -t~sK~l~-~G~~iG~~~~~~~-l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~--~~~~~~~~~~~~~l~~~L~ 338 (420)
T 2pb2_A 267 -TSAKALG-GGFPVSAMLTTQE-IASAFHVGSHGSTYGGNPLACAVAGAAFDIINT--PEVLQGIHTKRQQFVQHLQ 338 (420)
T ss_dssp -EECGGGG-TTSCCEEEEECHH-HHTTCC----CCEECCCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHH
T ss_pred -Eeccccc-CCCceEEEEEhHH-HHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 7899998 8999999999987 87776552 23567789999999888852111 2344555555555555443
No 131
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.82 E-value=4.6e-19 Score=201.00 Aligned_cols=199 Identities=11% Similarity=0.054 Sum_probs=152.6
Q ss_pred CCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEE-ecCchHHHHHHHHHHhccCCCeEEEcCC
Q 043334 626 FLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFI-YADCSQSLFNKLVLCCILEGGTLCFPAG 704 (903)
Q Consensus 626 ~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~-vt~Gs~~al~~ll~~l~~pGD~Vlv~~P 704 (903)
+.+.++.+.+++.+.. .+.......+..+.+++++++++|.+.+ +++ +++|+++++..++.++++|||+|++++|
T Consensus 19 p~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~---~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~ 94 (416)
T 3isl_A 19 PVEVDPRVLRVMSTPV-VGQFDPAFTGIMNETMEMLRELFQTKNR---WAYPIDGTSRAGIEAVLASVIEPEDDVLIPIY 94 (416)
T ss_dssp SCCCCHHHHHHTTSCC-CCTTSHHHHHHHHHHHHHHHHHTTCCCS---EEEEEESCHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CcCcCHHHHHHhcccC-CCCccHHHHHHHHHHHHHHHHHhCCCCC---cEEEecCcHHHHHHHHHHHhcCCCCEEEEecC
Confidence 3445666666554421 0111222355678899999999997643 555 8888999999999999999999999999
Q ss_pred CcHH--HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhh-cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCc
Q 043334 705 SNGN--YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILE-TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGA 781 (903)
Q Consensus 705 ~y~~--~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~-~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i 781 (903)
+|.. +...++..|++++.++++. ++.+|+++++++++ +++ ++|++++|+ ||||.+++ +++|.++|+++|+
T Consensus 95 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~-~~v~~~~~~-nptG~~~~---l~~i~~l~~~~~~ 167 (416)
T 3isl_A 95 GRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKP-KIVAMVHGE-TSTGRIHP---LKAIGEACRTEDA 167 (416)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCC-SEEEEESEE-TTTTEECC---CHHHHHHHHHTTC
T ss_pred CcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCC-cEEEEEccC-CCCceecC---HHHHHHHHHHcCC
Confidence 9997 7778899999999999975 35689999999998 466 599999998 99999999 8889999999999
Q ss_pred EEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHh
Q 043334 782 RVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 782 ~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~ 854 (903)
+||+|++|+.... .. + +... +..+++.|+||.++ .+.++||++++++ +++.+..
T Consensus 168 ~li~D~a~~~~~~---~~---~-------~~~~----~~d~~~~s~~K~l~-g~~g~g~~~~~~~-~~~~~~~ 221 (416)
T 3isl_A 168 LFIVDAVATIGGC---EV---K-------VDEW----KIDAAIGGTQKCLS-VPSGMAPITYNER-VADVIAA 221 (416)
T ss_dssp EEEEECTTTTTTS---CC---C-------TTTT----TCSEEECCSSSTTC-CCSSEEEEEECHH-HHHHHHT
T ss_pred EEEEECCccccCC---Cc---c-------hhhc----CCCEEEecCccccC-CCCCeEEEEECHH-HHHHhhc
Confidence 9999999852211 10 0 1111 35789999999743 3445899999987 8888874
No 132
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.82 E-value=1.8e-19 Score=202.36 Aligned_cols=242 Identities=12% Similarity=0.085 Sum_probs=176.0
Q ss_pred CCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCC
Q 043334 625 SFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAG 704 (903)
Q Consensus 625 p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P 704 (903)
.+.++++.+.+++.+.... ....+..+..+++++++++++|.+.. + +|++|+|+++++..++.+++++||+|+++.+
T Consensus 30 ~p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~~~-~-~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~ 106 (393)
T 3kgw_A 30 GPSNLAPRVLAAGSLRMIG-HMQKEMLQIMEEIKQGIQYVFQTRNP-L-TLVVSGSGHCAMETALFNLLEPGDSFLTGTN 106 (393)
T ss_dssp SCCCCCHHHHHHTTCCCCC-TTSHHHHHHHHHHHHHHHHHHTCCCS-E-EEEESCCTTTHHHHHHHHHCCTTCEEEEEES
T ss_pred CCCCCCHHHHHHhcccccC-cccHHHHHHHHHHHHHHHHHhCCCCC-c-EEEEeCCcHHHHHHHHHhcCCCCCEEEEEeC
Confidence 4456788888776553211 11222345677888889988887632 2 5999999999999999999999999999999
Q ss_pred CcHH--HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCc
Q 043334 705 SNGN--YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGA 781 (903)
Q Consensus 705 ~y~~--~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i 781 (903)
+|.. +...++..|++++.++++. ++.+|++++++.+++ ++ ++|++++|+ ||||.+++ +++|.++|+++|+
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~-~~v~~~~~~-nptG~~~~---l~~i~~l~~~~~~ 179 (393)
T 3kgw_A 107 GIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKP-VLLFLVHGE-SSTGVVQP---LDGFGELCHRYQC 179 (393)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCC-SEEEEESEE-TTTTEECC---CTTHHHHHHHTTC
T ss_pred CchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCC-cEEEEeccC-Ccchhhcc---HHHHHHHHHHcCC
Confidence 8853 4677889999999999865 346899999999987 66 599999997 99999999 7889999999999
Q ss_pred EEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceeeEEEeCcHHHHHHHHhCCC---
Q 043334 782 RVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGFLVLNHPQLVDAFSSFPG--- 857 (903)
Q Consensus 782 ~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~lv~~~~~li~~l~~~~~--- 857 (903)
+||+||+|+. ..... . +... +..+++.|+||.+ |.+| +||++++++ +++.+.....
T Consensus 180 ~li~De~~~~---g~~~~---~-------~~~~----~~d~~~~s~sK~~~~~~g--~g~~~~~~~-~~~~~~~~~~~~~ 239 (393)
T 3kgw_A 180 LLLVDSVASL---GGVPI---Y-------MDQQ----GIDIMYSSSQKVLNAPPG--ISLISFNDK-AKYKVYSRKTKPV 239 (393)
T ss_dssp EEEEECTTTT---TTSCC---C-------TTTT----TCCEEEEESSSTTCCCSS--CEEEEECHH-HHHHHHTCSSCCS
T ss_pred EEEEECCccc---cCccc---c-------hhhc----CCCEEEecCcccccCCCc--eeEEEECHH-HHHHHhccCCCCC
Confidence 9999999852 11110 0 0111 3578899999977 4444 899999987 8888875431
Q ss_pred ----------------------CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 858 ----------------------LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 858 ----------------------~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
...++...+.++..++.... +..++++++.++++++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~~~~~~~~~~~~~~~~~l~ 300 (393)
T 3kgw_A 240 SFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIA------EQGLENCWRRHREATAHLH 300 (393)
T ss_dssp CSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHH------HHCHHHHHHHHHHHHHHHH
T ss_pred ceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHH------HhhHHHHHHHHHHHHHHHH
Confidence 23456677777767763101 1224555666666665543
No 133
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.82 E-value=2.8e-19 Score=205.40 Aligned_cols=241 Identities=13% Similarity=0.078 Sum_probs=169.2
Q ss_pred CCCCCeEEccCCCC--CCC-CcHHHHHHHHHHHHcc---CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 612 TPNSGLIHMDVDQS--FLP-IPSLVKAAIFESFARQ---NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~-~p~~v~~al~~al~~y---~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..|...+|++.|.+ +++ .++.+.+++.+.+.++ ....|..++++++++++++.++.... + ++++|+|+++++
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~-~v~~~~ggsea~ 117 (439)
T 3dxv_A 40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGT-H-KIWFGHSGSDAN 117 (439)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTT-E-EEEEESSHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC-C-EEEEeCCHHHHH
Confidence 45677999998877 344 6889999999988764 23556788999999999998765441 2 899999999999
Q ss_pred HHHHHHh--ccCCCeEEEcCCCcHHHHHHHHHcCCE-E--------------EEecCCCCCCccc-----CHHHHHHHhh
Q 043334 686 NKLVLCC--ILEGGTLCFPAGSNGNYVSAARFLKAN-I--------------VNIPTESEVGFKM-----TEKTLVTILE 743 (903)
Q Consensus 686 ~~ll~~l--~~pGD~Vlv~~P~y~~~~~~~~~~G~~-v--------------v~v~~~~~~~f~l-----d~~~L~~~l~ 743 (903)
..++..+ ..+++.|++.+|+|..+...+...+.. . ..+|... .+.. |+++|+++++
T Consensus 118 ~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l~ 195 (439)
T 3dxv_A 118 EAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP--YRNDPTGDAILTLLTEKLA 195 (439)
T ss_dssp HHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC--BTTBTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc--ccccccHHHHHHHHHHHHH
Confidence 9998875 346788998899886554444333322 1 2233221 1111 6899999984
Q ss_pred ---cCCCcEEEEECCCCCCcccCCC-HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCC
Q 043334 744 ---TVKKPWVYISGPTINPTGLLYS-NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSF 819 (903)
Q Consensus 744 ---~~~~~~vil~~P~~NPTG~v~s-~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~ 819 (903)
+.+. .+++++|.+||+|.+.+ .+.+++|.++|++||++||+||+|.++.+.+... ........+
T Consensus 196 ~~~~~~~-~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~-------~~~~~~~~~---- 263 (439)
T 3dxv_A 196 AVPAGSI-GAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLH-------CFEHEGFVP---- 263 (439)
T ss_dssp TSCTTCE-EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSS-------GGGGTTCCC----
T ss_pred hcCCCCE-EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-------HHHhcCCCC----
Confidence 2333 44444555477887664 5559999999999999999999998765444321 112222211
Q ss_pred ceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHh
Q 043334 820 NVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 820 ~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
.++ ||||+++ +|+|+||++++++ +++.+.... .+. .+.++|.++.++|+
T Consensus 264 di~---s~sK~~~-~G~riG~~~~~~~-~~~~~~~~~~~~t~-~~~~~~~aa~aal~ 314 (439)
T 3dxv_A 264 DIL---VLGKGLG-GGLPLSAVIAPAE-ILDCASAFAMQTLH-GNPISAAAGLAVLE 314 (439)
T ss_dssp SEE---EECGGGG-TTSCCEEEEEEHH-HHTSCSSSSCCTTT-TCHHHHHHHHHHHH
T ss_pred CEE---EEcchhc-CCcceEEEEECHH-HHhhhcCCCcCCCc-ccHHHHHHHHHHHH
Confidence 222 9999998 6999999999887 888877653 356 88999999998884
No 134
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.81 E-value=2.5e-19 Score=198.53 Aligned_cols=232 Identities=12% Similarity=0.038 Sum_probs=156.2
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI 693 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~ 693 (903)
+..+|+|+.+.+.+ +++.+++++.+.... ...++..+....+++.+++++|.+ ++++++|+++++..++.+++
T Consensus 2 ~~~~i~~~~~~~~~-p~~~~~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~g~~-----~~~~~~~gt~a~~~~~~~~~ 74 (347)
T 1jg8_A 2 PHMMIDLRSDTVTK-PTEEMRKAMAQAEVG-DDVYGEDPTINELERLAAETFGKE-----AALFVPSGTMGNQVSIMAHT 74 (347)
T ss_dssp ---CEECSCGGGCC-CCHHHHHHHHTCCCC-CGGGTCCHHHHHHHHHHHHHHTCS-----EEEEESCHHHHHHHHHHHHC
T ss_pred CceEEEeccccCCC-CCHHHHHHHhcCCCC-CcccCCChHHHHHHHHHHHHhCCc-----eEEEecCcHHHHHHHHHHhc
Confidence 35689999999887 567788877654311 011222223334455555556653 35556666677888888999
Q ss_pred cCCCeEEEcCCCcHHHH---HHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcC-----CCcEEEEECCCCCCc-ccCC
Q 043334 694 LEGGTLCFPAGSNGNYV---SAARFLKANIVNIPTESEVGFKMTEKTLVTILETV-----KKPWVYISGPTINPT-GLLY 764 (903)
Q Consensus 694 ~pGD~Vlv~~P~y~~~~---~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~-----~~~~vil~~P~~NPT-G~v~ 764 (903)
+|||+|++++|+|.... ..++..|++++.+ .+ .++.+|++++++++++. ..++|++++|+ ||| |.++
T Consensus 75 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~-npt~G~~~ 150 (347)
T 1jg8_A 75 QRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTH-NRSGGRVV 150 (347)
T ss_dssp CTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSB-TTTTSBCC
T ss_pred CCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccc-cccCCccC
Confidence 99999999999997643 3678899999998 43 34668999999998751 23589999998 999 9999
Q ss_pred CHHHHHHHHHHHHhCCcEEEEecCCCCC--ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE-E
Q 043334 765 SNKEIENILTVCAKYGARVVIDTAFSGL--EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF-L 841 (903)
Q Consensus 765 s~eel~eI~~ia~k~~i~VI~DeaY~~l--~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~-l 841 (903)
+.+++++|+++|+++|++||+|++|... .+.+.. ..+.. ... +. ++.|+||.++++ +|| +
T Consensus 151 ~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~-----~~~~~---~~~----d~--~~~s~sK~l~~~---~G~~~ 213 (347)
T 1jg8_A 151 PLENIKEICTIAKEHGINVHIDGARIFNASIASGVP-----VKEYA---GYA----DS--VMFCLSKGLCAP---VGSVV 213 (347)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCC-----HHHHH---HTC----SE--EEEESSSTTCCS---SCEEE
T ss_pred cHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCC-----hHHhc---ccc----cE--EEEecccccCCC---ceEEE
Confidence 9999999999999999999999987311 112211 11111 111 22 345899999743 685 5
Q ss_pred EeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHHh
Q 043334 842 VLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 842 v~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L~ 874 (903)
+++++ +++.+..++. ....+...+.++...|.
T Consensus 214 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 249 (347)
T 1jg8_A 214 VGDRD-FIERARKARKMLGGGMRQAGVLAAAGIIALT 249 (347)
T ss_dssp EECHH-HHHHHHHHHHHHTCCCSSTHHHHHHHHHHHH
T ss_pred EcCHH-HHHHHHHHHHHcCCchhHHHHHHHHHHHHHH
Confidence 56655 8877665432 23345566666666673
No 135
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.81 E-value=1.2e-19 Score=205.50 Aligned_cols=250 Identities=14% Similarity=0.058 Sum_probs=174.3
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc-c----CCC---CCchH--HHHH-HHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR-Q----NMS---ESEID--VTPS-IQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~-y----~~~---~G~~~--lr~a-la~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
.+.|+++.|.+++ ++.+.+++.+.+.+ + ... .|.+. +++. .++++++++|.+.. +|++++|+.
T Consensus 23 ~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~---~i~~~sGt~- 96 (407)
T 2dkj_A 23 REGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWA---NVQPHSGSQ- 96 (407)
T ss_dssp HTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE---ECCCSSHHH-
T ss_pred hcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcc---eEEecchHH-
Confidence 4689999999887 78899998887753 2 111 14443 3443 34688888887633 688888876
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHH---HHHHHHcCC--EEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCC
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNY---VSAARFLKA--NIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTI 757 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~---~~~~~~~G~--~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~ 757 (903)
++..++.+++++||+|+++.|+|+.+ ...++..|. .++++++++ +++.+|++++++.+++ ++ ++|++++|+
T Consensus 97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~-~~v~~~~p~- 173 (407)
T 2dkj_A 97 ANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP-DTELIDLEEVRRLALEHRP-KVIVAGASA- 173 (407)
T ss_dssp HHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCT-TTSSCCHHHHHHHHHHHCC-SEEEECCSS-
T ss_pred HHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCc-ccCccCHHHHHHHHhhcCC-eEEEEeccc-
Confidence 99999999999999999999999887 344455565 555555443 3578999999999975 55 588888998
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCC-CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 758 NPTGLLYSNKEIENILTVCAKYGARVVIDTAFSG-LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 758 NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~-l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
|| .+.+ +++|.++|+++|++||+||+|+. +.+.+... .. +. ..+++++|+||. ++|+
T Consensus 174 ~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~------~~---~~------~~di~~~s~sK~--l~g~ 231 (407)
T 2dkj_A 174 YP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHP------NP---LP------YAHVVTSTTHKT--LRGP 231 (407)
T ss_dssp CC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSC------CC---TT------TCSEEEEESSGG--GCCC
T ss_pred cC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccC------Cc---cc------cccEEEEecccc--CCCC
Confidence 98 4555 88999999999999999999976 44444321 00 11 257899999995 4699
Q ss_pred eeeEEEeCcHHHHHHHHhCCC---CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 837 KFGFLVLNHPQLVDAFSSFPG---LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~~~~---~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
|+||++++++++++.+..... ..+++.....++..+|.. . ...+++++++.++++++.+
T Consensus 232 ~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~--~----~~~~~~~~~~~~~~~~~~l 293 (407)
T 2dkj_A 232 RGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFE--A----LQPEFKEYSRLVVENAKRL 293 (407)
T ss_dssp SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH--H----HSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHH--H----HHhhHHHHHHHHHHHHHHH
Confidence 999999994338888876542 233333333355566631 1 0134555666666666554
No 136
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.81 E-value=8.9e-19 Score=198.11 Aligned_cols=233 Identities=7% Similarity=0.037 Sum_probs=172.6
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccC--CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQN--MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~--~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..+...+|++.| .+.++ .++.+.+++.+.+.++. ...+..+.++++++++++.+| ++ +|++|+|+++++.
T Consensus 33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~----~~-~v~~~~gg~ea~~ 107 (395)
T 3nx3_A 33 DKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASA----LE-RVFFTNSGTESIE 107 (395)
T ss_dssp TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHT----CS-EEEEESSHHHHHH
T ss_pred CCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC----CC-eEEEeCCHHHHHH
Confidence 456778999877 45555 57899999999886632 233456788999999999887 23 8999999999999
Q ss_pred HHHHHhc-------cCCCeEEEcCCCcHHHHHHHHHcC-------------CEEEEecCCCCCCcccCHHHHHHHhhcCC
Q 043334 687 KLVLCCI-------LEGGTLCFPAGSNGNYVSAARFLK-------------ANIVNIPTESEVGFKMTEKTLVTILETVK 746 (903)
Q Consensus 687 ~ll~~l~-------~pGD~Vlv~~P~y~~~~~~~~~~G-------------~~vv~v~~~~~~~f~ld~~~L~~~l~~~~ 746 (903)
.++..+. .+||.|++.+|+|..+...+...+ .++..++. .|+++|++++++++
T Consensus 108 ~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~ 180 (395)
T 3nx3_A 108 GAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNEKT 180 (395)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCTTE
T ss_pred HHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccCCe
Confidence 9888775 357999999999976554443332 34555543 27999999987654
Q ss_pred CcEEEEECCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEc
Q 043334 747 KPWVYISGPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLG 825 (903)
Q Consensus 747 ~~~vil~~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~ 825 (903)
++++++.++ ||+|.+ ++.+++++|.++|++||+++|+||+|.++...+... . ....+ ...-+.
T Consensus 181 -~~v~~~~~~-~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~---~----~~~~~-------~~~d~~ 244 (395)
T 3nx3_A 181 -CAIILESVQ-GEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF---A----YEHAQ-------ILPDIM 244 (395)
T ss_dssp -EEEEEESEE-CTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---G----GGGGT-------CCCSEE
T ss_pred -EEEEEeCcc-CCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch---h----HHhcC-------CCCCEE
Confidence 466666555 676665 789999999999999999999999998765444321 1 11111 122245
Q ss_pred cCchhcccccceeeEEEeCcHHH-HHHHHhCC--CCCCCcHHHHHHHHHHHh
Q 043334 826 GLSLKMLTGALKFGFLVLNHPQL-VDAFSSFP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 826 S~SK~~g~~GlRiG~lv~~~~~l-i~~l~~~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
||||.++. |+|+||++++++ + ++.+.... ...+.+.+.|.++.++|+
T Consensus 245 t~sK~~~~-G~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~aal~ 294 (395)
T 3nx3_A 245 TSAKALGC-GLSVGAFVINQK-VASNSLEAGDHGSTYGGNPLVCAGVNAVFE 294 (395)
T ss_dssp EECGGGTT-TSCCEEEEECHH-HHHHHSCTTCCSSCBSCCHHHHHHHHHHHH
T ss_pred EecccccC-CCceEEEEEchh-hhhhhcCCcccCCCCCCCHHHHHHHHHHHH
Confidence 89999984 999999999988 7 88876643 267788999999999884
No 137
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.81 E-value=6.2e-19 Score=202.24 Aligned_cols=264 Identities=12% Similarity=0.083 Sum_probs=177.2
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..|...+|+..|. +.++ .++.+.+++.+.+.+.....+..+....+++.+++.++ . ++ +|++|+|+++++..+
T Consensus 52 ~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~--~~-~v~~~~sGsea~~~a 127 (434)
T 3l44_A 52 VDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMP-A--LD-KVRFVNSGTEAVMTT 127 (434)
T ss_dssp TTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCT-T--CS-EEEEESSHHHHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCC-C--CC-EEEEeCchHHHHHHH
Confidence 4677889997664 4455 58899999999887643333345667788888888776 2 34 899999999999999
Q ss_pred HHHhcc--CCCeEEEcCCCcHHHHHHHHHcCCE-EEEecCCCCCCcc------------cCHHHHHHHhhcC-CCcEEEE
Q 043334 689 VLCCIL--EGGTLCFPAGSNGNYVSAARFLKAN-IVNIPTESEVGFK------------MTEKTLVTILETV-KKPWVYI 752 (903)
Q Consensus 689 l~~l~~--pGD~Vlv~~P~y~~~~~~~~~~G~~-vv~v~~~~~~~f~------------ld~~~L~~~l~~~-~~~~vil 752 (903)
+..+.. +++.|++.+|+|..+...+...+.. ...+......++. -|+++++++++.. ....+++
T Consensus 128 i~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 207 (434)
T 3l44_A 128 IRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAIL 207 (434)
T ss_dssp HHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEE
T ss_pred HHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEE
Confidence 887765 6789999999997655443332221 1111110001110 1789999988742 1236777
Q ss_pred ECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 753 SGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 753 ~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
++|++|++|.+. +.+++++|.++|++||++||+||+|.++ ..+... ......-.+ -+.||||.+
T Consensus 208 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-------~~~~~~~~~-------di~t~sK~~ 272 (434)
T 3l44_A 208 VEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-------AQDLLGVTP-------DLTALGKVI 272 (434)
T ss_dssp ECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-------HHHHHTCCC-------SEEEEEGGG
T ss_pred EcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccH-------HHHHcCCCC-------Ceeehhhhh
Confidence 778745666555 8899999999999999999999999877 444321 122222221 145899999
Q ss_pred ccccceeeEEEeCcHHHHHHHHhC-----CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 832 LTGALKFGFLVLNHPQLVDAFSSF-----PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 832 g~~GlRiG~lv~~~~~li~~l~~~-----~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
+ +|+|+||++++++ +++.+... ..+++.+.+.|.++.++|+.-.. +.+.+.+.+.++.++++.
T Consensus 273 ~-~G~~iG~~~~~~~-i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L 340 (434)
T 3l44_A 273 G-GGLPIGAYGGKKE-IMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ--EGLYEKLDELGATLEKGI 340 (434)
T ss_dssp G-TTSSCEEEEECHH-HHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHH
T ss_pred c-CCcCeeeEEEcHH-HHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHH
Confidence 8 8999999999887 88888762 23678899999999998852111 233444444444444443
No 138
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.81 E-value=9.6e-19 Score=201.81 Aligned_cols=215 Identities=13% Similarity=0.133 Sum_probs=153.0
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCC
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEG 696 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pG 696 (903)
.+|+..+.+..+.++.+.+++......|....+..++++++++++ |. + ++++|+|+++++..++.+++++|
T Consensus 44 ylD~~~~~~~~~~~~~~~~a~~~~~~~y~~~~~~~~l~~~la~~~----~~--~---~~~~~~~gt~a~~~al~~l~~~g 114 (456)
T 2ez2_A 44 YIDLLTDSGTNAMSDKQWAGMMMGDEAYAGSENFYHLERTVQELF----GF--K---HIVPTHQGRGAENLLSQLAIKPG 114 (456)
T ss_dssp SEECSCSSSCCCCCHHHHHHHTTCCCCSSSCHHHHHHHHHHHHHH----CC--S---EEEEESSHHHHHHHHHHHHCCTT
T ss_pred eeeeccccCCccCCHHHHHHhhcchhhcccChhHHHHHHHHHHHh----CC--C---cEEEeCCcHHHHHHHHHHhCCCC
Confidence 344444443344566666665422112333334455666665554 43 2 68999999999999999999999
Q ss_pred CeEEEcCCCc-HHHHHHHHHcCCEEEEecCCCC----C----CcccCHHHHHHHhhcCC---CcEEEEECCCCC-CcccC
Q 043334 697 GTLCFPAGSN-GNYVSAARFLKANIVNIPTESE----V----GFKMTEKTLVTILETVK---KPWVYISGPTIN-PTGLL 763 (903)
Q Consensus 697 D~Vlv~~P~y-~~~~~~~~~~G~~vv~v~~~~~----~----~f~ld~~~L~~~l~~~~---~~~vil~~P~~N-PTG~v 763 (903)
| +++.|+| +.+...++..|++++.++++.+ + +|.+|+++|++++++++ .++|++++|+ | |||.+
T Consensus 115 d--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~-n~ptG~~ 191 (456)
T 2ez2_A 115 Q--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTV-NLAGGQP 191 (456)
T ss_dssp C--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSB-TTTTSBC
T ss_pred C--EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccC-CCCCCcc
Confidence 9 7889999 8889999999999999998732 2 37899999999998655 2589999998 8 99999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCC----------CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccc
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSG----------LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLT 833 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~----------l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~ 833 (903)
++.+++++|.++|+++|++||+||+|+. +.|.+.. ..+....+...+ .++++ |++|.. +
T Consensus 192 ~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~----d~~~~-S~kk~~-~ 260 (456)
T 2ez2_A 192 VSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKS-----IAEIVHEMFSYA----DGCTM-SGKKDC-L 260 (456)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSC-----HHHHHHHHHTTC----SEEEE-ETTTTT-C
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcc-----hhhhhhhhcccC----CEEEE-eCcccC-C
Confidence 9999999999999999999999999975 4455432 111111112221 34555 777865 4
Q ss_pred ccceeeEEEeCcHHHHHHHHhC
Q 043334 834 GALKFGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 834 ~GlRiG~lv~~~~~li~~l~~~ 855 (903)
+| |.||++++++++++.+...
T Consensus 261 ~~-~gG~~~~~~~~~~~~~~~~ 281 (456)
T 2ez2_A 261 VN-IGGFLCMNDDEMFSSAKEL 281 (456)
T ss_dssp CS-SCEEEEESCHHHHHHHHHH
T ss_pred CC-ceeEEEECCHHHHHHHHHH
Confidence 77 8999999544488777653
No 139
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.81 E-value=4.4e-19 Score=201.29 Aligned_cols=223 Identities=10% Similarity=0.021 Sum_probs=164.2
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-c
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-I 693 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~ 693 (903)
.+.+||+.|.++++ +.+.+++.+.+....+.. .+....+++.+++++|.+ ++++++|+++++..++.++ +
T Consensus 30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~~~y~~--~~~~~~l~~~la~~~~~~-----~~v~~~~Gt~a~~~~l~~~~~ 100 (399)
T 2oga_A 30 VPFLDLKAAYEELR--AETDAAIARVLDSGRYLL--GPELEGFEAEFAAYCETD-----HAVGVNSGMDALQLALRGLGI 100 (399)
T ss_dssp BCSCCHHHHHHHTH--HHHHHHHHHHHHHTCCSS--SHHHHHHHHHHHHHTTSS-----EEEEESCHHHHHHHHHHHTTC
T ss_pred CcccccCcCCCCCC--HHHHHHHHHHHhcCCCCC--chhHHHHHHHHHHHHCCC-----eEEEecCHHHHHHHHHHHhCC
Confidence 46789998887654 788888888775422211 123344445555555653 3455555589999999999 8
Q ss_pred cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 694 LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 694 ~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
++||+|+++.|+|+.+...++..|++++.+++++ ++|.+|++++++.+++++ ++|+ |+ ||||.+.+ +++|.
T Consensus 101 ~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~-~~v~---~~-n~tG~~~~---l~~i~ 171 (399)
T 2oga_A 101 GPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRT-RALL---PV-HLYGHPAD---MDALR 171 (399)
T ss_dssp CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTE-EEEC---CB-CGGGCCCC---HHHHH
T ss_pred CCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCC-eEEE---Ee-CCcCCccC---HHHHH
Confidence 9999999999999999999999999999999975 357899999999997654 3443 77 99999987 88899
Q ss_pred HHHHhCCcEEEEecCCCCC-ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccC--chhcccccceeeEEEeCcHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGL-EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGL--SLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l-~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~--SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
++|+++|++||+||+|+.. .+++.. +... ..+++.|+ ||.+|.+| |+||++++++++++
T Consensus 172 ~l~~~~~~~li~Dea~~~g~~~~~~~------------~~~~-----~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~ 233 (399)
T 2oga_A 172 ELADRHGLHIVEDAAQAHGARYRGRR------------IGAG-----SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAE 233 (399)
T ss_dssp HHHHHHTCEECEECTTCTTCEETTEE------------TTCT-----TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHH
T ss_pred HHHHHcCCEEEEECcccccCccCCee------------cccc-----cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHH
Confidence 9999999999999999754 233221 1111 25788998 89999879 99999998555887
Q ss_pred HHHhCCC--------------CCCCcHHHHHHHHHHH
Q 043334 851 AFSSFPG--------------LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 851 ~l~~~~~--------------~~~~s~~~Q~aa~~~L 873 (903)
.+..... ...++...+.++...+
T Consensus 234 ~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l 270 (399)
T 2oga_A 234 RLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRL 270 (399)
T ss_dssp HHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHH
T ss_pred HHHHHHhcCccccccccccccCCCcCHHHHHHHHHHH
Confidence 7765321 1234566666666666
No 140
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.81 E-value=5.8e-19 Score=203.48 Aligned_cols=266 Identities=10% Similarity=0.089 Sum_probs=183.4
Q ss_pred CCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccC--CC-CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 613 PNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQN--MS-ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 613 ~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~--~~-~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
.+...+|++.|. ++++ .++.+.+++.+.+.++. .. .+..+++.++++.+++.++... + +|++|+|+++++.
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~-~v~~~~ggsea~~ 124 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNL--N-HVFFTDSGSECAL 124 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTE--E-EEEEESSHHHHHH
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCC--C-EEEEcCcHHHHHH
Confidence 456688987554 3443 37899999998876642 11 4566778899999998876543 3 8999999999999
Q ss_pred HHHHHhcc--------CCCeEEEcCCCcHHHH-HHHHHcCC------------EEEEecCCC--CCCc-ccC--------
Q 043334 687 KLVLCCIL--------EGGTLCFPAGSNGNYV-SAARFLKA------------NIVNIPTES--EVGF-KMT-------- 734 (903)
Q Consensus 687 ~ll~~l~~--------pGD~Vlv~~P~y~~~~-~~~~~~G~------------~vv~v~~~~--~~~f-~ld-------- 734 (903)
.++.+++. +||.|++.+|+|..+. ..+...|. .+..++... ..+| .+|
T Consensus 125 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~ 204 (449)
T 3a8u_X 125 TAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIAL 204 (449)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHH
Confidence 99988765 6899999999998653 34444431 234444321 1111 146
Q ss_pred HHHHHHHhhcC--CCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhh
Q 043334 735 EKTLVTILETV--KKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL 811 (903)
Q Consensus 735 ~~~L~~~l~~~--~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l 811 (903)
+++|++.+++. .+..+++++|++||||. +.+.+++++|.++|++||++||+||+|.++.+.+... .+...
T Consensus 205 ~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-------~~~~~ 277 (449)
T 3a8u_X 205 ADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMF-------GADSF 277 (449)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-------HHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcch-------hhhhc
Confidence 89999988731 12367778887678996 6679999999999999999999999997665444321 12222
Q ss_pred ccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhC----------C-CCCCCcHHHHHHHHHHHhccccc
Q 043334 812 YSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF----------P-GLSKPHSTVRYAIKKLLGLRERK 879 (903)
Q Consensus 812 ~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~----------~-~~~~~s~~~Q~aa~~~L~~~~~~ 879 (903)
.-.+ .++ ||||.++ +| +|+||++++++ +++.+... . .+.+.+.++|.++.++|+.-..
T Consensus 278 ~~~~----di~---s~sK~l~-~G~~~~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~- 347 (449)
T 3a8u_X 278 GVTP----DLM---CIAKQVT-NGAIPMGAVIASTE-IYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK- 347 (449)
T ss_dssp TCCC----SEE---EECGGGG-TTSSCCEEEEEEHH-HHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred CCCC----CEE---EEccccc-CCCCceEEEEECHH-HHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-
Confidence 2222 222 9999998 57 99999999876 89988763 1 2566788889888888842111
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 043334 880 ARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 880 ~~~~~~~l~~~r~~y~~Rr~ 899 (903)
+.+.+++.++++.++++.+
T Consensus 348 -~~~~~~~~~~~~~l~~~L~ 366 (449)
T 3a8u_X 348 -ENLVQSVAEVAPHFEKALH 366 (449)
T ss_dssp -TTHHHHHHHHHHHHHHHHH
T ss_pred -cCHHHHHHHHHHHHHHHHH
Confidence 2345556666666655543
No 141
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.81 E-value=4.6e-19 Score=198.65 Aligned_cols=201 Identities=11% Similarity=0.063 Sum_probs=144.4
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchH---HHHHHHHHHHhhcCCC--CCCCCcEEecCchHHHHHHHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEID---VTPSIQQYIKSNFGFP--IDINAEFIYADCSQSLFNKLVL 690 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~---lr~ala~~l~~~~G~~--~~pe~~I~vt~Gs~~al~~ll~ 690 (903)
+.+.|.-| +.++++.+.+++.+.... .+.+. ....+++.+++.++.. .+++ +|++|+|+++++..++.
T Consensus 5 ~~~~~~p~--p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~~g~t~al~~~~~ 77 (385)
T 2bkw_A 5 VDTLLIPG--PIILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAASKSQ-PFVLAGSGTLGWDIFAS 77 (385)
T ss_dssp CCEECSSS--SCCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGGGTCE-EEEEESCTTHHHHHHHH
T ss_pred cceeecCC--CcCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCCCCCc-eEEEcCchHHHHHHHHH
Confidence 34555554 345667777776553322 12221 2333444444444432 2334 89999999999999999
Q ss_pred Hhc---cCCCeEEEc-CCCcHHHH-HHHHHcCCEEEEecC-CCCCCcccCHHHHHHHhhc-CCCcEEEEECCCCCCcccC
Q 043334 691 CCI---LEGGTLCFP-AGSNGNYV-SAARFLKANIVNIPT-ESEVGFKMTEKTLVTILET-VKKPWVYISGPTINPTGLL 763 (903)
Q Consensus 691 ~l~---~pGD~Vlv~-~P~y~~~~-~~~~~~G~~vv~v~~-~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v 763 (903)
+++ ++||+|+++ .|+|..+. ..++..|++++.+++ + .++.+|+++|++++++ ++ ++|++++|+ ||||.+
T Consensus 78 ~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~d~~~l~~~l~~~~~-~~v~~~~~~-nptG~~ 153 (385)
T 2bkw_A 78 NFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLK--IGESVPLELITEKLSQNSY-GAVTVTHVD-TSTAVL 153 (385)
T ss_dssp HHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSS--TTSCCCHHHHHHHHHHSCC-SEEEEESEE-TTTTEE
T ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCC--CCCCCCHHHHHHHHhcCCC-CEEEEEccC-CCcCeE
Confidence 998 899999887 55666663 677889999999998 5 3567999999999987 55 599999998 999999
Q ss_pred CCHHHHHHHHHHHHhC--CcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc-ccccceeeE
Q 043334 764 YSNKEIENILTVCAKY--GARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM-LTGALKFGF 840 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~--~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~-g~~GlRiG~ 840 (903)
++ +++|.++|+++ |++||+|++|+. ..... + +... +.++++.|+||.+ |.+|+ ||
T Consensus 154 ~~---l~~i~~~~~~~~~~~~li~D~a~~~---~~~~~---~-------~~~~----~~d~~~~s~~K~~~~~~G~--G~ 211 (385)
T 2bkw_A 154 SD---LKAISQAIKQTSPETFFVVDAVCSI---GCEEF---E-------FDEW----GVDFALTASQKAIGAPAGL--SI 211 (385)
T ss_dssp CC---HHHHHHHHHHHCTTSEEEEECTTTT---TTSCC---C-------TTTT----TCSEEEEESSSTTCCCSCE--EE
T ss_pred cC---HHHHHHHHHhhCCCCEEEEECcccc---CCccc---c-------cccc----CceEEEecCccccccCCcc--eE
Confidence 98 77999999999 999999999962 11111 1 1111 2578999999966 45775 99
Q ss_pred EEeCcHHHHH
Q 043334 841 LVLNHPQLVD 850 (903)
Q Consensus 841 lv~~~~~li~ 850 (903)
++++++ +++
T Consensus 212 ~~~~~~-~~~ 220 (385)
T 2bkw_A 212 SLCSSR-FMD 220 (385)
T ss_dssp EEECHH-HHH
T ss_pred EEEcHH-HHH
Confidence 999887 665
No 142
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.81 E-value=2.5e-19 Score=193.64 Aligned_cols=180 Identities=19% Similarity=0.257 Sum_probs=141.3
Q ss_pred cccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccccc
Q 043334 2 MVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDE 81 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~ 81 (903)
.+.|++|+|+..+..+.+.+..... .++.+|||+|||+|.+++.+++..++.+|+|+|+|+.+++.|++|+..+++
T Consensus 83 ~~~~~~~ipr~~te~l~~~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~-- 158 (276)
T 2b3t_A 83 FVSPATLIPRPDTECLVEQALARLP--EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI-- 158 (276)
T ss_dssp ECCTTSCCCCTTHHHHHHHHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC--
T ss_pred EeCCCCcccCchHHHHHHHHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--
Confidence 4689999999777666665443221 256799999999999999999988889999999999999999999988876
Q ss_pred CCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccccc
Q 043334 82 KGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVE 161 (903)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~ 161 (903)
++++++++|+.+.... ++||+|++||||+.... ..+...+..+ .+..++.+
T Consensus 159 --------------~~v~~~~~d~~~~~~~--~~fD~Iv~npPy~~~~~-~~l~~~v~~~---------~p~~al~~--- 209 (276)
T 2b3t_A 159 --------------KNIHILQSDWFSALAG--QQFAMIVSNPPYIDEQD-PHLQQGDVRF---------EPLTALVA--- 209 (276)
T ss_dssp --------------CSEEEECCSTTGGGTT--CCEEEEEECCCCBCTTC-HHHHSSGGGS---------SCSTTTBC---
T ss_pred --------------CceEEEEcchhhhccc--CCccEEEECCCCCCccc-cccChhhhhc---------CcHHHHcC---
Confidence 4799999999886432 38999999999997655 3333333332 23334443
Q ss_pred ccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 162 DQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 162 ~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
+.+|+..+..+++++.++|||||.+++.++..... .+.+++++.||..+....
T Consensus 210 ~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~l~~~Gf~~v~~~~ 262 (276)
T 2b3t_A 210 ADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGE-AVRQAFILAGYHDVETCR 262 (276)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHH-HHHHHHHHTTCTTCCEEE
T ss_pred CCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHH-HHHHHHHHCCCcEEEEEe
Confidence 67888899999999999999999999998776554 457889999998655543
No 143
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.80 E-value=1e-18 Score=201.83 Aligned_cols=257 Identities=13% Similarity=0.069 Sum_probs=173.8
Q ss_pred CCCCCeEEccCCCC--CCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQS--FLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..+...||++.|.+ +++ .++.+.+++.+.+.......+..++++++++++++.++ .++ +|++++|+++++..+
T Consensus 54 ~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~-~v~~~~gg~eA~~~a 129 (453)
T 2cy8_A 54 VDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFP---SIR-KLRFTGSGTETTLLA 129 (453)
T ss_dssp TTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCT---TCS-EEEEESCHHHHHHHH
T ss_pred CCCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCC---CCC-EEEEeCCHHHHHHHH
Confidence 35667899988863 333 68899999999886532223467889999999999875 334 899999999999998
Q ss_pred HHH---hccCCCeEEEcCCCcHHHHHHHHH-----------cCC------EEEEecCCCCCCcccCHHHHHHHhhcC-CC
Q 043334 689 VLC---CILEGGTLCFPAGSNGNYVSAARF-----------LKA------NIVNIPTESEVGFKMTEKTLVTILETV-KK 747 (903)
Q Consensus 689 l~~---l~~pGD~Vlv~~P~y~~~~~~~~~-----------~G~------~vv~v~~~~~~~f~ld~~~L~~~l~~~-~~ 747 (903)
+.+ +.+ ++.|++.+|+|.++...+.. .|+ .++.++. .|++++++.+++. .+
T Consensus 130 l~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~ 201 (453)
T 2cy8_A 130 LRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHGSD 201 (453)
T ss_dssp HHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHHGGG
T ss_pred HHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcCCC
Confidence 887 555 46888888999876543321 132 1333332 3789999988742 12
Q ss_pred cEEEEECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEcc
Q 043334 748 PWVYISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGG 826 (903)
Q Consensus 748 ~~vil~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S 826 (903)
..+++++|++||||.++ +.+++++|.++|++||++||+||+|.++ +.+.. ......+-.+ . +.|
T Consensus 202 ~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-------~~~~~~~~~~----d---i~s 266 (453)
T 2cy8_A 202 IAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH-------GMQALLDVQP----D---LTC 266 (453)
T ss_dssp EEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT-------HHHHHHTCCC----S---EEE
T ss_pred EEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch-------hhhHHhCCCC----c---EEE
Confidence 35777888757899764 7999999999999999999999999876 44322 1122222222 1 339
Q ss_pred CchhcccccceeeEEEeCcHHHHHHHHhC------C-CCCCCcHHHHHHHHHHHhc-ccccchhHHHHHHHHHHHHHHHH
Q 043334 827 LSLKMLTGALKFGFLVLNHPQLVDAFSSF------P-GLSKPHSTVRYAIKKLLGL-RERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 827 ~SK~~g~~GlRiG~lv~~~~~li~~l~~~------~-~~~~~s~~~Q~aa~~~L~~-~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
|||.++ +|+|+||++++++ +++.+... . .+.+.+.+++.++.++|+. - .+.+.+++.++++.++++.
T Consensus 267 ~sK~l~-~G~~~G~v~~~~~-~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~---~~~~~~~~~~~~~~l~~~L 341 (453)
T 2cy8_A 267 LAKASA-GGLPGGILGGRED-VMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL---EDDVCAKINDLGQFAREAM 341 (453)
T ss_dssp EEGGGG-TTSSCEEEEECHH-HHTTSSSCC---------CCCCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHH
T ss_pred EChhhh-CCcceEEEechHH-HHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHH
Confidence 999998 5999999999986 88877651 1 2567788999999888852 1 1235566777777776665
Q ss_pred HH
Q 043334 899 KR 900 (903)
Q Consensus 899 ~~ 900 (903)
+.
T Consensus 342 ~~ 343 (453)
T 2cy8_A 342 NH 343 (453)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 144
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.80 E-value=1.5e-18 Score=198.54 Aligned_cols=192 Identities=13% Similarity=0.094 Sum_probs=148.5
Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHH----cCCEEE
Q 043334 646 MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARF----LKANIV 721 (903)
Q Consensus 646 ~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~----~G~~vv 721 (903)
+..+..+.++++++.+++.+|.+ ++++++|+++++..++.+++++||.|++++|+|..+...++. .|++++
T Consensus 75 y~r~~~p~~~~l~~~la~~~g~~-----~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~ 149 (414)
T 3ndn_A 75 YSRYGNPTVSVFEERLRLIEGAP-----AAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTV 149 (414)
T ss_dssp BTTTCCHHHHHHHHHHHHHHTCS-----EEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEE
T ss_pred cCCCCChHHHHHHHHHHHHHCCC-----cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEE
Confidence 34444567889999999988852 577777779999999999999999999999999998877744 999999
Q ss_pred EecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCC
Q 043334 722 NIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGG 801 (903)
Q Consensus 722 ~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~ 801 (903)
.++++ |++++++++++++ ++|++++|+ ||||.+.+ +++|.++|+++|++||+||+|....+. .+
T Consensus 150 ~v~~~-------d~~~l~~ai~~~t-~~v~le~p~-NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~-~~--- 213 (414)
T 3ndn_A 150 FVDGD-------DLSQWERALSVPT-QAVFFETPS-NPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ-QG--- 213 (414)
T ss_dssp EECTT-------CHHHHHHHTSSCC-SEEEEESSC-TTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC-CC---
T ss_pred EeCCC-------CHHHHHHhcCCCC-eEEEEECCC-CCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC-Cc---
Confidence 99874 6899999998877 599999998 99999987 888999999999999999999621111 00
Q ss_pred CchhhhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHH-HHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 802 WDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVD-AFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 802 ~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~-~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
. .. +..+++.|+||.++.+| +|+||++++++ .+. .+..... ....+....+++...+
T Consensus 214 ------~----~~----g~div~~S~sK~l~~~G~~~~G~vv~~~~-~~~~~l~~~~~~~g~~~~~~~a~~~~~~l 274 (414)
T 3ndn_A 214 ------F----PL----GVDVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQKLMRHTGPAMSAFNAWVLLKGL 274 (414)
T ss_dssp ------G----GG----TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHTTHHHHHHHHHCCCCCHHHHHHHHHHG
T ss_pred ------h----hc----CCCeEeccCCccccCCCCceEEEEEECHH-HHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 1 11 35789999999999888 89999999887 554 5553322 2334444444444444
No 145
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.80 E-value=1.4e-18 Score=200.69 Aligned_cols=263 Identities=9% Similarity=0.050 Sum_probs=183.5
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccC--CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQN--MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~--~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|++.| .+.++ .++.+.+++.+.+.+.. ...+..+.+.++++++++.++... +|++|+|+++++.
T Consensus 46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~----~v~~~~ggseA~~ 121 (452)
T 3n5m_A 46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEY----VIFFSNSGSEANE 121 (452)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCE----EEEEESSHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCc----eEEEeCchHHHHH
Confidence 467789999877 34444 57899999999887642 234667889999999999887543 2999999999999
Q ss_pred HHHHHhc-----c---CCCeEEEcCCCcHHHHHHHHHcCCE-------------EEEecCCCC--CCcc--------cCH
Q 043334 687 KLVLCCI-----L---EGGTLCFPAGSNGNYVSAARFLKAN-------------IVNIPTESE--VGFK--------MTE 735 (903)
Q Consensus 687 ~ll~~l~-----~---pGD~Vlv~~P~y~~~~~~~~~~G~~-------------vv~v~~~~~--~~f~--------ld~ 735 (903)
.++..++ . ++|.|++.+|+|..+...+...+.. ...++.... ..++ .++
T Consensus 122 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (452)
T 3n5m_A 122 TAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECV 201 (452)
T ss_dssp HHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHH
Confidence 9998887 5 7899999999998876655554432 333332110 0011 018
Q ss_pred HHHHHHhh---cCCCcEEEEECCC-CCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhh
Q 043334 736 KTLVTILE---TVKKPWVYISGPT-INPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSK 810 (903)
Q Consensus 736 ~~L~~~l~---~~~~~~vil~~P~-~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~ 810 (903)
++|++.++ +.+ ..+++++|. || ||.++ +.+++++|.++|++||+++|+||+|.++.+.+... . ...
T Consensus 202 ~~le~~l~~~~~~~-~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~---~----~~~ 272 (452)
T 3n5m_A 202 KEVDRVMTWELSET-IAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF---G----FMN 272 (452)
T ss_dssp HHHHHHHHHHCGGG-EEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---G----GGG
T ss_pred HHHHHHHHhcCCCC-EEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc---h----hhh
Confidence 99999887 223 356666676 69 99766 88889999999999999999999998776555431 1 111
Q ss_pred hccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHh--------CCCCCCCcHHHHHHHHHHHhcccccch
Q 043334 811 LYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSS--------FPGLSKPHSTVRYAIKKLLGLRERKAR 881 (903)
Q Consensus 811 l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~--------~~~~~~~s~~~Q~aa~~~L~~~~~~~~ 881 (903)
..-. .-+.+|||++++ | +|+||++++++ +++.+.. ...+++.++++|.++.++|+.-.. +
T Consensus 273 ~~~~-------~di~t~sK~l~~-G~~~ig~~~~~~~-i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~ 341 (452)
T 3n5m_A 273 YDVK-------PDIITMAKGITS-AYLPLSATAVKRE-IYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN--E 341 (452)
T ss_dssp TTCC-------CSEEEECGGGGT-TSSCCEEEEEEHH-HHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH--T
T ss_pred cCCC-------CCEEeecccccC-CCcceEEEEECHH-HHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh--c
Confidence 1111 123479999986 9 99999999887 9888853 113677889999999999852111 2
Q ss_pred hHHHHHHHHHHHHHHHH
Q 043334 882 DLMNAVAEHIRNLESRS 898 (903)
Q Consensus 882 ~~~~~l~~~r~~y~~Rr 898 (903)
.+.+.+.+..+.++++.
T Consensus 342 ~~~~~~~~~~~~l~~~L 358 (452)
T 3n5m_A 342 NLIERSAQMGSLLLEQL 358 (452)
T ss_dssp THHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 33344444444444443
No 146
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.80 E-value=2.6e-19 Score=203.26 Aligned_cols=226 Identities=11% Similarity=0.017 Sum_probs=156.0
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHH-ccCCC-------CC---chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFA-RQNMS-------ES---EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~-~y~~~-------~G---~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
+.|+|..+++.. ++.+.+++.+.+. .|... .| ..++.+.+++.+++.+|.+.+ +|++++| +++
T Consensus 26 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~---~i~~~sG-t~a 99 (417)
T 3n0l_A 26 EGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFA---NVQPNSG-SQA 99 (417)
T ss_dssp HSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE---ECCCSSH-HHH
T ss_pred cCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCc---ceEeccH-HHH
Confidence 468887776654 7889998887763 22110 11 235556677788888888544 7999999 699
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHHH---HHHH--cCCEEEEecCCCCCCcccCHHHHHHHhh-cCCCcEEEEECCCCC
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYVS---AARF--LKANIVNIPTESEVGFKMTEKTLVTILE-TVKKPWVYISGPTIN 758 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~~---~~~~--~G~~vv~v~~~~~~~f~ld~~~L~~~l~-~~~~~~vil~~P~~N 758 (903)
+..++.++++|||+|+++.|+|..+.. .... .+..+++++.+ +++.+|+++|++.++ .++ ++|++++|+ |
T Consensus 100 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~-~~v~~~~~~-~ 175 (417)
T 3n0l_A 100 NQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKP-KLIVCGASA-Y 175 (417)
T ss_dssp HHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCC-SEEEECCSS-C
T ss_pred HHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCC-eEEEECCcc-c
Confidence 999999999999999999999987654 3333 34556777765 467799999999998 455 588888776 6
Q ss_pred CcccCCCHHHHHHHHHHHHhCCcEEEEecCCC-CCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce
Q 043334 759 PTGLLYSNKEIENILTVCAKYGARVVIDTAFS-GLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK 837 (903)
Q Consensus 759 PTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~-~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR 837 (903)
|.+++ +++|.++|+++|++||+||+|. ++.|.+... ..+ . ...+++.|+||++ +|+|
T Consensus 176 --G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~------~~~---~------~~di~~~s~sK~l--~g~~ 233 (417)
T 3n0l_A 176 --ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHP------SPF---P------YAHVVSSTTHKTL--RGPR 233 (417)
T ss_dssp --CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC------CCT---T------TCSEEEEESSTTT--CSCS
T ss_pred --CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCC------Ccc---c------cceEEEeeCcccc--CCCC
Confidence 77888 8899999999999999999963 344444321 001 1 2468999999987 6899
Q ss_pred eeEEEeCcHHHHHHHHhCCC---CCCCcHHHHHHHHHHH
Q 043334 838 FGFLVLNHPQLVDAFSSFPG---LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 838 iG~lv~~~~~li~~l~~~~~---~~~~s~~~Q~aa~~~L 873 (903)
.||++++++++++.+..... ..+++...+.++..++
T Consensus 234 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~ 272 (417)
T 3n0l_A 234 GGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGF 272 (417)
T ss_dssp CEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHH
T ss_pred eeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHH
Confidence 99999995448888876533 2344455555555455
No 147
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.80 E-value=3.5e-19 Score=197.75 Aligned_cols=222 Identities=13% Similarity=0.173 Sum_probs=163.5
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccC--CC---CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQN--MS---ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~--~~---~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
.+.+.-| +.++|+.+++++.+++.+.. .. .+..++.+.+++++++.+|.+ +++ +|++|+|+++++..++.+
T Consensus 5 ~~~~~p~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~-~v~~~~g~t~al~~~~~~ 80 (362)
T 3ffr_A 5 KIYFTPG--PSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNY-EVLFLASATEIWERIIQN 80 (362)
T ss_dssp CEEECSS--SCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTE-EEEEESCHHHHHHHHHHH
T ss_pred ceeccCC--CcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCc-EEEEeCCchHHHHHHHHh
Confidence 4555544 34567778888877766532 11 123356788899999999885 334 899999999999999999
Q ss_pred hccCCCeEEEcCCCcHH-HHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 692 CILEGGTLCFPAGSNGN-YVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 692 l~~pGD~Vlv~~P~y~~-~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
++++ +.+++..|.|.. +...++..|++++.++.+. ++.+|+++++ +++++ ++|++++|+ ||||.+++ ++
T Consensus 81 l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~--~~~~~-~~v~~~~~~-nptG~~~~---l~ 150 (362)
T 3ffr_A 81 CVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAAF--GKGFYPADIT--VPADA-EIICLTHNE-TSSGVSMP---VE 150 (362)
T ss_dssp HCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCGGGCC--CCTTC-CEEEEESEE-TTTTEECC---HH
T ss_pred ccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCC--CCCCCHHHHh--ccCCc-cEEEEEcCC-CCcceeCC---HH
Confidence 9988 666666667763 3456788899999999853 5678999998 55556 599999998 99999999 77
Q ss_pred HHHHHHHhC-CcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcc-cccceeeEEEeCcHHH
Q 043334 771 NILTVCAKY-GARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKML-TGALKFGFLVLNHPQL 848 (903)
Q Consensus 771 eI~~ia~k~-~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g-~~GlRiG~lv~~~~~l 848 (903)
+|.++|+++ |++||+|++|+.... .. . +. ...+++.|+||.++ ++| +|+++++++ +
T Consensus 151 ~i~~la~~~p~~~li~D~a~~~~~~---~~---~-------~~------~~d~~~~s~~K~~~~~~G--~g~~~~~~~-~ 208 (362)
T 3ffr_A 151 DINTFRDKNKDALIFVDAVSSLPYP---KF---D-------WT------KIDSVFFSVQKCFGLPAG--LGVWILNDR-V 208 (362)
T ss_dssp HHTTSGGGSTTSEEEEECTTTTTSS---CC---C-------TT------SCSEEEEETTSTTCCCSC--CEEEEEEHH-H
T ss_pred HHHHHHHhCCCCEEEEecccccCCc---cc---C-------hh------HCcEEEEecccccCCCCc--eEEEEECHH-H
Confidence 788899999 999999999863221 10 0 00 14588999999998 788 577888876 7
Q ss_pred HHHHHhCCC-----------------------CCCCcHHHHHHHHHHHh
Q 043334 849 VDAFSSFPG-----------------------LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 849 i~~l~~~~~-----------------------~~~~s~~~Q~aa~~~L~ 874 (903)
++.+..... ...++...+.++..++.
T Consensus 209 ~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 257 (362)
T 3ffr_A 209 IEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTG 257 (362)
T ss_dssp HHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH
T ss_pred HHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHH
Confidence 777665321 45566777777777773
No 148
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.80 E-value=1e-18 Score=202.17 Aligned_cols=265 Identities=11% Similarity=0.038 Sum_probs=183.5
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHcc---CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQ---NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y---~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..|...+|+..| .+.++ .++.+.+++.+.+.+. ....+..+.+.++++++++.++... ++ +|++|+|+++++
T Consensus 61 ~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~-~v~~~~sGseA~ 138 (453)
T 4ffc_A 61 ADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDH-DK-RTALFNSGAEAV 138 (453)
T ss_dssp TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSS-CE-EEEEESSHHHHH
T ss_pred CCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCC-Cc-EEEEeCcHHHHH
Confidence 456779999876 45555 4889999998887653 2345677889999999999876432 23 899999999999
Q ss_pred HHHHHHhcc--CCCeEEEcCCCcHHHHHHHHHcCC--------------EEEEecCC--CCCCcccC--------HHHHH
Q 043334 686 NKLVLCCIL--EGGTLCFPAGSNGNYVSAARFLKA--------------NIVNIPTE--SEVGFKMT--------EKTLV 739 (903)
Q Consensus 686 ~~ll~~l~~--pGD~Vlv~~P~y~~~~~~~~~~G~--------------~vv~v~~~--~~~~f~ld--------~~~L~ 739 (903)
..++..... .++.|++.+|+|..+...+...+. .+..+|.. ..+.+..+ .+.++
T Consensus 139 ~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~ 218 (453)
T 4ffc_A 139 ENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIE 218 (453)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHH
Confidence 998876653 458999999999876655544322 34445443 11112233 45666
Q ss_pred HHhhcCCCcEEEEECCCCCCcc--cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCC
Q 043334 740 TILETVKKPWVYISGPTINPTG--LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNS 817 (903)
Q Consensus 740 ~~l~~~~~~~vil~~P~~NPTG--~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~ 817 (903)
+.+.+.+ .+++++.|+ ||+| .+.+.+.+++|.++|++||++||+||+|.++.+.+... . ......
T Consensus 219 ~~i~~~~-~aavi~ep~-~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~---a----~~~~~~---- 285 (453)
T 4ffc_A 219 TQIGAQS-LAAIIIEPI-QGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWF---A----SEHEGI---- 285 (453)
T ss_dssp HHTCGGG-EEEEEECSS-BTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---T----HHHHTC----
T ss_pred HhcCCCC-EEEEEEcCC-CCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccc---h----hhhcCC----
Confidence 6665444 478889998 8877 45588889999999999999999999998775555421 1 122221
Q ss_pred CCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHH
Q 043334 818 SFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLE 895 (903)
Q Consensus 818 ~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~ 895 (903)
..-+.||||.+++ |||+||++++++ +++.+.... .+++.++++|.++.++|+.-.. +.+.+++.+..+.++
T Consensus 286 ---~pdi~t~sK~~~~-G~~~G~~~~~~~-i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~ 358 (453)
T 4ffc_A 286 ---VPDIVTMAKGIAG-GMPLSAVTGRAE-LMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE--LDLPARARAIEASVT 358 (453)
T ss_dssp ---CCSEEEECGGGGT-TSSCEEEEEEHH-HHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHH
T ss_pred ---CcchHhhhhhhcC-CcCeEEEEECHH-HHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHH
Confidence 2224579999986 999999999877 888877543 3778899999999999952111 233444444444444
Q ss_pred HHH
Q 043334 896 SRS 898 (903)
Q Consensus 896 ~Rr 898 (903)
++.
T Consensus 359 ~~l 361 (453)
T 4ffc_A 359 SRL 361 (453)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 149
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.80 E-value=8e-19 Score=203.28 Aligned_cols=244 Identities=12% Similarity=0.082 Sum_probs=176.5
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccC----CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQN----MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~----~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
..|...+|++.| .+.++ .++.+.+++.+.+.+.. ...+..+.+.++++++++.++...+ +|++|+|++++
T Consensus 47 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~---~v~~~~ggseA 123 (459)
T 4a6r_A 47 SEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFD---RVFYTNSGSES 123 (459)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCC---EEEEESSHHHH
T ss_pred CCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCC---EEEEeCchHHH
Confidence 456778999876 45555 47889999999887632 2345678899999999998776544 89999999999
Q ss_pred HHHHHHHhcc--------CCCeEEEcCCCcHHHHHHHHHcCC-------------EEEEecCCC--C-CCcccC------
Q 043334 685 FNKLVLCCIL--------EGGTLCFPAGSNGNYVSAARFLKA-------------NIVNIPTES--E-VGFKMT------ 734 (903)
Q Consensus 685 l~~ll~~l~~--------pGD~Vlv~~P~y~~~~~~~~~~G~-------------~vv~v~~~~--~-~~f~ld------ 734 (903)
+..++..+++ +++.|++.+|+|.++...+...+. .+..++... . +.+ +|
T Consensus 124 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~ 202 (459)
T 4a6r_A 124 VDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGV 202 (459)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHH
Confidence 9999998876 578999999999887666554432 233333211 0 112 34
Q ss_pred --HHHHHHHhhcC--CCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhh
Q 043334 735 --EKTLVTILETV--KKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLS 809 (903)
Q Consensus 735 --~~~L~~~l~~~--~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~ 809 (903)
+++|++.+... ...++++++|++|++|. +++.+++++|.++|++||+++|+||+|.++...+... ...
T Consensus 203 ~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-------~~~ 275 (459)
T 4a6r_A 203 VAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-------GHQ 275 (459)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-------HHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-------hHh
Confidence 78888888631 12367788887455555 5599999999999999999999999998776555431 122
Q ss_pred hhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHh---CC--CCCCCcHHHHHHHHHHHh
Q 043334 810 KLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSS---FP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 810 ~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~---~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
.....+ . +.+|||+++..|+|+||++++++ +++.+.. .. .+++.++++|.++.++|+
T Consensus 276 ~~~~~p----d---i~t~sK~l~gg~~~lg~v~~~~~-i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 337 (459)
T 4a6r_A 276 HFGFQP----D---LFTAAKGLSSGYLPIGAVFVGKR-VAEGLIAGGDFNHGFTYSGHPVCAAVAHANVA 337 (459)
T ss_dssp HHTCCC----S---EEEECGGGGTTSSCCEEEEECHH-HHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHH
T ss_pred hcCCCC----C---eeehhhhhcCCCCCccceeeCHH-HHHHhhcCCCcccCCCCCCCHHHHHHHHHHHH
Confidence 222222 2 33689999755599999999887 9998872 22 266788999999999995
No 150
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.80 E-value=3.9e-18 Score=196.16 Aligned_cols=259 Identities=11% Similarity=0.079 Sum_probs=177.0
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCC-C-CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNM-S-ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~-~-~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..|. ++++ .++.+.+++.+.+.++.. + ....+.+..+++.+++.+|. + +|++++|+++++.
T Consensus 62 ~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~----~-~v~~~~sGseA~~ 136 (433)
T 1z7d_A 62 VNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLGY----D-KVLMMNTGAEANE 136 (433)
T ss_dssp TTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHTC----S-EEEEESSHHHHHH
T ss_pred CCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcCC----C-eEEEeCCHHHHHH
Confidence 4567789998764 4666 789999999998866422 1 23456778888888888762 3 8999999999999
Q ss_pred HHHHHhc---------cCC-CeEEEcCCCcHHHHH-HHHHcC------------CEEEEecCCCCCCcccCHHHHHHHhh
Q 043334 687 KLVLCCI---------LEG-GTLCFPAGSNGNYVS-AARFLK------------ANIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 687 ~ll~~l~---------~pG-D~Vlv~~P~y~~~~~-~~~~~G------------~~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
.++..+. .+| |.|++.+|+|..+.. .+...| .+++.+|. .|+++++++++
T Consensus 137 ~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~ 209 (433)
T 1z7d_A 137 TAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELK 209 (433)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHHHHHT
T ss_pred HHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhC
Confidence 9888753 478 999999999987643 333333 24444543 37999999984
Q ss_pred cCCCcEEEEECCCCCCcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 744 TVKKPWVYISGPTINPTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
... ..+++++|.+|+||.+ ++.+.+++|.++|+++|+++|+||+|.++.+.+... . .....-.+ .+
T Consensus 210 ~~~-~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~---~----~~~~~~~~----di- 276 (433)
T 1z7d_A 210 DPN-VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL---C----VHHYNVKP----DV- 276 (433)
T ss_dssp STT-EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS---G----GGGGTCCC----SE-
T ss_pred CCC-EEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch---h----hHhcCCCC----CE-
Confidence 222 3567777876789975 788999999999999999999999998755444321 1 11111111 22
Q ss_pred EEccCchhccccc-ceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 823 ~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
.||||.++ +| +|+||++++++ +++.+.... .+.+.+.+++.++.++|+.-.. +.+.+.+.++++.++++.+
T Consensus 277 --~t~sK~l~-~G~~~~G~v~~~~~-~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~ 350 (433)
T 1z7d_A 277 --ILLGKALS-GGHYPISAVLANDD-IMLVIKPGEHGSTYGGNPLAASICVEALNVLIN--EKLCENAEKLGGPFLENLK 350 (433)
T ss_dssp --EEECGGGG-TTSSCCEEEEECHH-HHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHH
T ss_pred --EEECcccc-CCCCCeEEEEECHH-HHhhhccccccccCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 28999998 89 99999999987 887776532 3667788899888888842111 2345666667777766655
Q ss_pred HH
Q 043334 900 RL 901 (903)
Q Consensus 900 ~l 901 (903)
.+
T Consensus 351 ~l 352 (433)
T 1z7d_A 351 RE 352 (433)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 151
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.80 E-value=2.6e-18 Score=194.11 Aligned_cols=186 Identities=16% Similarity=0.152 Sum_probs=146.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCCCC
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTESE 728 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~~~ 728 (903)
....+++.+++++|.+ + .|++++| ++++..++.+++++||.|+++.|+|...... ++..|++++.++.+
T Consensus 53 ~~~~l~~~la~~~~~~-~---~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-- 125 (386)
T 1cs1_A 53 TRDVVQRALAELEGGA-G---AVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG-- 125 (386)
T ss_dssp HHHHHHHHHHHHHTCS-E---EEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT--
T ss_pred cHHHHHHHHHHHhCCC-c---EEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCC--
Confidence 3445555555666654 2 7888888 8999999999999999999999999974443 46679999999863
Q ss_pred CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 729 VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
|++.+++.+++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+||+|..+.+. . + .
T Consensus 126 -----d~~~l~~~i~~~~-~~v~~~~~~-nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~--~-------~-~ 185 (386)
T 1cs1_A 126 -----DEQALRAALAEKP-KLVLVESPS-NPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ--N-------P-L 185 (386)
T ss_dssp -----CHHHHHHHHHTCC-SEEEEECSC-TTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC--C-------G-G
T ss_pred -----CHHHHHHhhccCC-cEEEEeCCC-CCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC--C-------c-c
Confidence 7899999998766 599999998 99999997 889999999999999999999765432 1 1 1
Q ss_pred hhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
. . +.++++.|+||.++.+|.|+ ||++++++++++.+..... ....+...++++...+
T Consensus 186 ~----~----~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l 245 (386)
T 1cs1_A 186 A----L----GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGL 245 (386)
T ss_dssp G----G----TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHH
T ss_pred c----c----CceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 1 1 36799999999999999997 9999987448888876543 3446777787776666
No 152
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.80 E-value=7.8e-20 Score=203.47 Aligned_cols=241 Identities=11% Similarity=0.157 Sum_probs=170.8
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHcc--------CC---CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCch-HH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQ--------NM---SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCS-QS 683 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y--------~~---~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs-~~ 683 (903)
.+++++.|.+ ++|+.+++++.+.+..+ .. ..+..++.+++++++++++|.+ +++ +|++|+|+ ++
T Consensus 3 ~~~~~~~g~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~-~v~~~~g~gt~ 78 (360)
T 1w23_A 3 QVFNFNAGPS--ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDY-QILFLQGGASL 78 (360)
T ss_dssp CCEECCSSSC--CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTE-EEEEESSHHHH
T ss_pred ceEeecCCCc--CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCc-eEEEECCcchH
Confidence 3677777754 67889999998877542 01 2234456788999999999986 344 89999999 99
Q ss_pred HHHHHHHHhccC---CCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHH-HhhcCCCcEEEEECCCCCC
Q 043334 684 LFNKLVLCCILE---GGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVT-ILETVKKPWVYISGPTINP 759 (903)
Q Consensus 684 al~~ll~~l~~p---GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~-~l~~~~~~~vil~~P~~NP 759 (903)
++..++.+++.+ ||.|+++.++|..+ ..++..| +++.+++++++++ +|++++++ ++++++ ++|++++|+ ||
T Consensus 79 al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~~-~d~~~l~~~~i~~~~-k~v~~~~~~-np 153 (360)
T 1w23_A 79 QFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANSY-QSIPDFSEFQLNEND-AYLHITSNN-TI 153 (360)
T ss_dssp HHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGTS-CSCCCGGGCCCCTTE-EEEEEESEE-TT
T ss_pred HHHHHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccCc-CCccchHhhccCCCC-CEEEEeCCC-CC
Confidence 999999888865 56777777776653 3467789 9999999753444 78888988 776665 589999998 99
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
||.+++ ++ ++++|++||+|++|+.... + .+ +.. ..++++|+||.+|++| +|
T Consensus 154 tG~~~~--~i------~~~~~~~li~D~a~~~~~~---~---~~-------~~~------~di~~~s~sK~~~~~G--~G 204 (360)
T 1w23_A 154 YGTQYQ--NF------PEINHAPLIADMSSDILSR---P---LK-------VNQ------FGMIYAGAQKNLGPSG--VT 204 (360)
T ss_dssp TTEECS--SC------CCCCSSCEEEECTTTTTSS---C---CC-------GGG------CSEEEEETTTTTSCTT--CE
T ss_pred cceecc--cc------cccCCceEEEechhhcCCC---C---cC-------ccc------CCEEEEEcccccCCCC--cE
Confidence 999988 22 2389999999999964321 1 01 111 1478999999999777 89
Q ss_pred EEEeCcHHHHHHHHhCC-------------C-CCCCcHHHHHHHHHHHhcccccchhHHH--HHHHHHHHHHHHHHHHh
Q 043334 840 FLVLNHPQLVDAFSSFP-------------G-LSKPHSTVRYAIKKLLGLRERKARDLMN--AVAEHIRNLESRSKRLK 902 (903)
Q Consensus 840 ~lv~~~~~li~~l~~~~-------------~-~~~~s~~~Q~aa~~~L~~~~~~~~~~~~--~l~~~r~~y~~Rr~~l~ 902 (903)
|++++++ +++.+.... . ...++...+.++..+++. +.+ +++++++.++++++.+.
T Consensus 205 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-------~~~~~~~~~~~~~~~~~~~~l~ 275 (360)
T 1w23_A 205 VVIVKKD-LLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDW-------IKDLGGAEAIAKQNEEKAKIIY 275 (360)
T ss_dssp EEEEEHH-HHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH-------HHHTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEcHH-HHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHH-------HHHhcCHHHHHHHHHHHHHHHH
Confidence 9999887 766554432 1 234566667777776731 111 45566666666666553
No 153
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.79 E-value=3.1e-18 Score=195.27 Aligned_cols=185 Identities=17% Similarity=0.135 Sum_probs=146.4
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCCCCC
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTESEV 729 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~~~~ 729 (903)
...+++.+++++|.+ + .|++++|+ +++..++. ++++||+|++++|+|+..... ++..|++++.++++
T Consensus 69 ~~~l~~~la~~~g~~-~---~i~~~sG~-~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~--- 139 (403)
T 3cog_A 69 RNCLEKAVAALDGAK-Y---CLAFASGL-AATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS--- 139 (403)
T ss_dssp HHHHHHHHHHHHTCS-E---EEEESCHH-HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT---
T ss_pred HHHHHHHHHHHhCCC-c---EEEECCHH-HHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC---
Confidence 445555556666664 2 79999886 89999888 899999999999999975443 35689999999874
Q ss_pred CcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCC-cEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 730 GFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYG-ARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 730 ~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~-i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
|++++++++++++ ++|++++|+ ||||.+++ +++|.++|+++| +++|+|++|....+. .+ +
T Consensus 140 ----d~~~l~~~i~~~t-~~v~~~~p~-nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~-~~---------~ 200 (403)
T 3cog_A 140 ----KIKLLEAAITPET-KLVWIETPT-NPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ-RP---------L 200 (403)
T ss_dssp ----SHHHHHHHCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC-CT---------T
T ss_pred ----CHHHHHHhcCcCC-eEEEEECCC-CCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC-Cc---------c
Confidence 6899999998766 599999998 99999998 889999999999 999999999765442 11 1
Q ss_pred hhhccCCCCCCceEEEccCchhcccccc-eeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGAL-KFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~Gl-RiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
. . +.+++++|+||.++.+|. |+||++++++++++.+..... ....+.+.|+++...|.
T Consensus 201 ~----~----~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 261 (403)
T 3cog_A 201 A----L----GADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLK 261 (403)
T ss_dssp T----T----TCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred c----c----CCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 1 1 368999999999998775 799999975548888876543 44567788888887773
No 154
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.79 E-value=2.1e-19 Score=200.65 Aligned_cols=242 Identities=10% Similarity=0.108 Sum_probs=170.7
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccC---------CCC--CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQN---------MSE--SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~---------~~~--G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.++.+..|. .++|+.+++++.+.+..+. ..+ +..++++++++.+++.+|.+.+.+ .+++|+|++++
T Consensus 4 ~~~l~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~-~i~~t~g~t~a 80 (362)
T 2c0r_A 4 RAYNFNAGP--AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYK-VLFIQGGASTQ 80 (362)
T ss_dssp CCEECCSSS--CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEE-EEEESSHHHHH
T ss_pred ceeeccCCC--CCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcE-EEEECCCchHH
Confidence 356666663 5788999999988775431 111 134568899999999999853211 35788999999
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHH--HHHHHHcCCEEEEecCCCC--CCcccCHHHHHHHhhcCCCcEEEEECCCCCCc
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNY--VSAARFLKANIVNIPTESE--VGFKMTEKTLVTILETVKKPWVYISGPTINPT 760 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~--~~~~~~~G~~vv~v~~~~~--~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPT 760 (903)
+..++.++++|||+|+++++.+... ...++..| +++.++++.+ .++.+|.++++ +++++ ++|++++|+ |||
T Consensus 81 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t-~~v~~~~~~-n~t 155 (362)
T 2c0r_A 81 FAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNA-AYLHLTSNE-TIE 155 (362)
T ss_dssp HHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTE-EEEEEESEE-TTT
T ss_pred HHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCc-CEEEEeCCc-Ccc
Confidence 9999999999999999887764442 46677889 9999998632 23335665553 55555 589999998 999
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF 840 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~ 840 (903)
|.+++ ++++| +|+++|+|++|+... .+. + +.. ..+++.|+||.+|++| +||
T Consensus 156 G~~~~--~l~~i------~~~~vivD~a~~~~~---~~~---~-------~~~------~d~~~~s~~K~~g~~G--~G~ 206 (362)
T 2c0r_A 156 GAQFK--AFPDT------GSVPLIGDMSSDILS---RPF---D-------LNQ------FGLVYAGAQKNLGPSG--VTV 206 (362)
T ss_dssp TEECS--SCCCC------TTSCEEEECTTTTTS---SCC---C-------GGG------CSEEEEETTTTTCCSS--CEE
T ss_pred ceecc--ccccc------CCCEEEEEChhhccC---Ccc---c-------hhH------CcEEEEeccccccCcC--cEE
Confidence 99765 35554 899999999996431 111 1 111 2478889999999889 999
Q ss_pred EEeCcHHHHHHHHhC--------------CCCCCCcHHHHHHHHHHHhcccccchhHHH--HHHHHHHHHHHHHHHHh
Q 043334 841 LVLNHPQLVDAFSSF--------------PGLSKPHSTVRYAIKKLLGLRERKARDLMN--AVAEHIRNLESRSKRLK 902 (903)
Q Consensus 841 lv~~~~~li~~l~~~--------------~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~--~l~~~r~~y~~Rr~~l~ 902 (903)
++++++ +++.+... ....+++.+.|.++..+|+. +.+ .++++++.++++++++.
T Consensus 207 l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~~~~l~ 276 (362)
T 2c0r_A 207 VIVRED-LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKW-------IEERGGLEGVQQANRKKASLIY 276 (362)
T ss_dssp EEEEGG-GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH-------HHHTTHHHHHHHHHHHHHHHHH
T ss_pred EEEcHH-HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHH-------HHHhCCHHHHHHHHHHHHHHHH
Confidence 999887 66555431 12356778889999988841 112 46667777777777654
No 155
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.79 E-value=1.9e-18 Score=190.48 Aligned_cols=182 Identities=14% Similarity=0.022 Sum_probs=144.5
Q ss_pred HHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCCCCCcc
Q 043334 657 IQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTESEVGFK 732 (903)
Q Consensus 657 la~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~~~~f~ 732 (903)
+++.+++.+|.+ + .|++++| ++++..++.+++++||+|+++.|+|+.+...+ +..|++++.++.
T Consensus 3 l~~~la~~~g~~-~---~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------- 70 (331)
T 1pff_A 3 LEGKIAKLEHAE-A---CAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM------- 70 (331)
T ss_dssp HHHHHHHHHTCS-E---EEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-------
T ss_pred HHHHHHHHhCCC-e---EEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-------
Confidence 344444555664 2 6888888 79999999989999999999999999987765 458999999986
Q ss_pred cCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHh-CCcEEEEecCCCCCccCCCCCCCCchhhhhhhh
Q 043334 733 MTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAK-YGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKL 811 (903)
Q Consensus 733 ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k-~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l 811 (903)
.|++.+++.+++++ ++|++++|+ ||||.+++ +++|.++|++ +|+++|+|++|....+. . + .
T Consensus 71 ~d~~~l~~~i~~~~-~~v~~~~~~-nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~--~-------~-~--- 132 (331)
T 1pff_A 71 AVPGNIEKHLKPNT-RIVYFETPA-NPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT--N-------P-L--- 132 (331)
T ss_dssp TSTTHHHHTCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC--C-------G-G---
T ss_pred CCHHHHHHhhcCCC-eEEEEECCC-CCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC--C-------h-h---
Confidence 36788999888665 589999998 99999997 8899999999 99999999999643321 0 1 1
Q ss_pred ccCCCCCCceEEEccCchhcccccce-eeEEEeCcHHHHHHHHhCCCC---CCCcHHHHHHHHHHH
Q 043334 812 YSSTNSSFNVSLLGGLSLKMLTGALK-FGFLVLNHPQLVDAFSSFPGL---SKPHSTVRYAIKKLL 873 (903)
Q Consensus 812 ~~~~~~~~~vI~l~S~SK~~g~~GlR-iG~lv~~~~~li~~l~~~~~~---~~~s~~~Q~aa~~~L 873 (903)
.. ++++++.|+||.+++||.| +||++++++++++.+...... .+.+...|+++...+
T Consensus 133 -~~----~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 193 (331)
T 1pff_A 133 -DL----GVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGT 193 (331)
T ss_dssp -GG----TCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHH
T ss_pred -hc----CCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCc
Confidence 11 3689999999999999999 799999983399998876543 356777787766666
No 156
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.79 E-value=3.7e-18 Score=194.81 Aligned_cols=201 Identities=13% Similarity=0.062 Sum_probs=157.2
Q ss_pred cCCCCCCCC-cHHHHHHHHHHHHc-----cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-c
Q 043334 621 DVDQSFLPI-PSLVKAAIFESFAR-----QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-I 693 (903)
Q Consensus 621 s~g~p~~~~-p~~v~~al~~al~~-----y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~ 693 (903)
+.|.|++++ ++.+.+++.+.+.. |....|.+++++++++.+++.+|.+ . .|++++| ++++..++.++ +
T Consensus 5 ~~g~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~-~---~i~~~~g-t~al~~~~~~~~~ 79 (418)
T 2c81_A 5 FDHWPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP-Y---CVPTTSG-STALMLALEALGI 79 (418)
T ss_dssp ---CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS-E---EEEESCH-HHHHHHHHHHTTC
T ss_pred cCCCCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC-c---EEEeCCH-HHHHHHHHHHcCC
Confidence 446666664 78899999888865 3334577778899999999988876 2 4665555 69999999999 8
Q ss_pred cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 694 LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 694 ~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
++||+|+++.|+|..+...++..|++++.+++++ ++|.+|++++++.+++++ ++|+ ++ ||||...+ +++|.
T Consensus 80 ~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~-~~v~---~~-~~~G~~~~---~~~i~ 150 (418)
T 2c81_A 80 GEGDEVIVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKT-KAII---PV-HLFGSMAN---MDEIN 150 (418)
T ss_dssp CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTE-EEEC---CB-CCTTCCCC---HHHHH
T ss_pred CCcCEEEECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCC-eEEE---Ee-CCcCCccc---HHHHH
Confidence 9999999999999999999999999999999975 468899999999987655 3555 45 79998865 88999
Q ss_pred HHHHhCCcEEEEecCCCCCc-cCCCCCCCCchhhhhhhhccCCCCCCceEEEccC--chhcccccceeeEEEeCcHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGLE-FNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGL--SLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l~-f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~--SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
++|+++|++||+|++|+.+. |++... ... ..+.+.|| ||.++. | |+||++++++++++
T Consensus 151 ~~~~~~~~~li~D~a~~~~~~~~~~~~------------~~~-----~~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~ 211 (418)
T 2c81_A 151 EIAQEHNLFVIEDCAQSHGSVWNNQRA------------GTI-----GDIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFE 211 (418)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETTEET------------TSS-----SSEEEEECCTTSSSCS-S-SCEEEEESCHHHHH
T ss_pred HHHHHCCCEEEEECcccccCccCCEec------------ccc-----cceEEEeccCCcccCC-C-CeEEEEECCHHHHH
Confidence 99999999999999998765 544221 111 13677788 999986 8 99999997554877
Q ss_pred HHHh
Q 043334 851 AFSS 854 (903)
Q Consensus 851 ~l~~ 854 (903)
.+..
T Consensus 212 ~~~~ 215 (418)
T 2c81_A 212 LIQQ 215 (418)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 157
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.79 E-value=4.5e-18 Score=192.82 Aligned_cols=188 Identities=17% Similarity=0.141 Sum_probs=150.0
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~ 726 (903)
.+..+.+++.+++.+|.+ + .+++++| ++++..++.+++++||+|+++.|+|+.+... ++..|++++.++.
T Consensus 58 ~~~~~~l~~~la~~~g~~-~---~i~~~sG-~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~- 131 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAA-G---SAAFGSG-MGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT- 131 (389)
T ss_dssp CHHHHHHHHHHHHHHTCS-E---EEEESSH-HHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT-
T ss_pred ChHHHHHHHHHHHHhCCC-e---EEEeCCH-HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC-
Confidence 345667777788777765 2 4666555 5999999999999999999999999986665 5779999999986
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
.|++++++.+++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+|++|....+. .+
T Consensus 132 ------~d~~~l~~~i~~~~-~~v~~~~~~-nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~-~~-------- 191 (389)
T 3acz_A 132 ------SDVEKVKAAWKPNT-KMVYLESPA-NPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL-KP-------- 191 (389)
T ss_dssp ------TCHHHHHHTCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC-CG--------
T ss_pred ------CCHHHHHHhcCCCC-eEEEEECCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc-Cc--------
Confidence 37899999998766 599999998 99999998 889999999999999999999754331 11
Q ss_pred hhhhhccCCCCCCceEEEccCchhccccccee-eEEEeCc-HHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNH-PQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~-~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
+. . +.+++++|+||.++.+|.|+ ||+++++ + +++.+..... ....+...++++...|+
T Consensus 192 -~~----~----~~di~~~S~sK~~~~~~~~~~G~v~~~~~~-~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 253 (389)
T 3acz_A 192 -LE----L----GADIALHSVSKYINGHGDVIGGVSSAKTAE-DIATIKFYRKDAGSLMAPMDAFLCARGMK 253 (389)
T ss_dssp -GG----T----TCSEEEEETTTTTTCSSCCCCEEEEESSHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred -cc----c----CCeEEEECChhhccCCCCceeEEEEECcHH-HHHHHHHHHHhcCCCCCHHHHHHHHcCcc
Confidence 11 1 36799999999999999998 9999998 6 8888876542 34456677777777773
No 158
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.79 E-value=1.1e-18 Score=198.27 Aligned_cols=192 Identities=13% Similarity=0.063 Sum_probs=149.8
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEE
Q 043334 647 SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVN 722 (903)
Q Consensus 647 ~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~ 722 (903)
..+..+..+.+++.+++.+|.+ + .+++++| ++++..++.+++++||+|+++.|+|+.+...+ +..|++++.
T Consensus 60 ~r~~~~~~~~l~~~la~~~g~~-~---~i~~~sG-~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 134 (398)
T 1gc0_A 60 SRISNPTLNLLEARMASLEGGE-A---GLALASG-MGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRH 134 (398)
T ss_dssp ---CCHHHHHHHHHHHHHHTCS-E---EEEESSH-HHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEE
T ss_pred cCCCChHHHHHHHHHHHHhCCC-c---EEEECCH-HHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence 3334566778888888888865 2 5777777 59999999999999999999999999987766 667999999
Q ss_pred ecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCC
Q 043334 723 IPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGW 802 (903)
Q Consensus 723 v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~ 802 (903)
++.+ |++.+++.+++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+|++|....+..
T Consensus 135 ~~~~-------d~~~l~~~i~~~~-~~v~~~~~~-nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~------ 196 (398)
T 1gc0_A 135 VDMA-------DLQALEAAMTPAT-RVIYFESPA-NPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR------ 196 (398)
T ss_dssp ECTT-------CHHHHHHHCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC------
T ss_pred ECCC-------CHHHHHHhcCCCC-eEEEEECCC-CCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC------
Confidence 9862 7899999998765 599999998 99999997 8899999999999999999996443311
Q ss_pred chhhhhhhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHH-HHHhCCC---CCCCcHHHHHHHHHHHh
Q 043334 803 DLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVD-AFSSFPG---LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 803 s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~-~l~~~~~---~~~~s~~~Q~aa~~~L~ 874 (903)
+ +. . +.++++.|+||.++.+|+|+ ||++++++ +++ .+..... ....+...++++...++
T Consensus 197 ---~-~~----~----~~d~~~~S~sK~~~~~~~~~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 1gc0_A 197 ---P-LE----L----GADLVVHSATKYLSGHGDITAGIVVGSQA-LVDRIRLQGLKDMTGAVLSPHDAALLMRGIK 260 (398)
T ss_dssp ---G-GG----G----TCSEEEEETTTTTTCSSSCCCEEEEECHH-HHHHHHHTHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred ---c-hh----h----CceEEEECCccccCCCCCCeEEEEEEChH-HHHHHHHHHhhccCCCCCCHHHHHHHHhccc
Confidence 0 11 1 36799999999999999998 99999877 554 4443221 23467777887777773
No 159
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.79 E-value=9.8e-18 Score=188.92 Aligned_cols=200 Identities=13% Similarity=0.123 Sum_probs=152.5
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccC--CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQN--MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC- 692 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~--~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l- 692 (903)
++|+|+. |++ |+.+++++.+.+.+.. +..+..+++++++ +++|.+ ++++++|+++++..++.++
T Consensus 9 ~~i~~~~--p~~--~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la----~~~~~~-----~~~~~~~gt~al~~~~~~~~ 75 (393)
T 1mdo_A 9 DFLPFSR--PAM--GAEELAAVKTVLDSGWITTGPKNQELEAAFC----RLTGNQ-----YAVAVSSATAGMHIALMALG 75 (393)
T ss_dssp CCBCSCC--CCC--CHHHHHHHHHHHHHTCCSSSHHHHHHHHHHH----HHHCCS-----EEEEESCHHHHHHHHHHHTT
T ss_pred cccccCC--CCC--CHHHHHHHHHHHhcCCcCCChHHHHHHHHHH----HHhCCC-----cEEEecChHHHHHHHHHHcC
Confidence 4677775 553 4677888888876532 2223444455554 445542 6999999999999999999
Q ss_pred ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHH
Q 043334 693 ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENI 772 (903)
Q Consensus 693 ~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI 772 (903)
+++||+|+++.|+|+.+...++..|++++.+++++ +++.+|++++++.+++++ ++|++ + ||||.+.+ +++|
T Consensus 76 ~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~-~~v~~---~-~~~G~~~~---~~~i 146 (393)
T 1mdo_A 76 IGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQT-KAIIP---V-HYAGAPAD---LDAI 146 (393)
T ss_dssp CCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTE-EEECC---B-CGGGCCCC---HHHH
T ss_pred CCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCc-eEEEE---e-CCCCCcCC---HHHH
Confidence 99999999999999999999999999999999975 467899999999997654 45554 3 68999876 8889
Q ss_pred HHHHHhCCcEEEEecCCCC-CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH
Q 043334 773 LTVCAKYGARVVIDTAFSG-LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 773 ~~ia~k~~i~VI~DeaY~~-l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~ 851 (903)
.++|+++|++||+|++|+. ..+.+... . . .++++.||||+.+++|.|+||++++++++++.
T Consensus 147 ~~l~~~~~~~li~D~a~~~g~~~~~~~~---------~--------~-~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~ 208 (393)
T 1mdo_A 147 YALGERYGIPVIEDAAHATGTSYKGRHI---------G--------A-RGTAIFSFHAIKNITCAEGGIVVTDNPQFADK 208 (393)
T ss_dssp HHHHHHHTCCBCEECTTCTTCEETTEET---------T--------S-SSEEEEECCTTSSSCSSSCEEEEESCHHHHHH
T ss_pred HHHHHHcCCeEEEECccccCCeECCeec---------C--------C-CCeEEEeCCCCCccccccceEEEeCCHHHHHH
Confidence 9999999999999999974 34433210 0 0 46899999944455667999999985448888
Q ss_pred HHhC
Q 043334 852 FSSF 855 (903)
Q Consensus 852 l~~~ 855 (903)
+...
T Consensus 209 l~~~ 212 (393)
T 1mdo_A 209 LRSL 212 (393)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 160
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.78 E-value=8.4e-18 Score=190.89 Aligned_cols=190 Identities=14% Similarity=0.111 Sum_probs=152.5
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPT 725 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~ 725 (903)
..+..+.+++.+++.+|.+ ++++++|+++++..++.+++++||+|+++.|+|+.+...+ +..|.+++.++.
T Consensus 64 ~~~~~~~l~~~la~~~g~~-----~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 138 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDAA-----FGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVAL 138 (392)
T ss_dssp CCHHHHHHHHHHHHHTTCS-----EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred CChHHHHHHHHHHHHhCCC-----cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCC
Confidence 3445677888888877764 4777777799999999999999999999999999877766 668999999987
Q ss_pred CCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchh
Q 043334 726 ESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLE 805 (903)
Q Consensus 726 ~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~ 805 (903)
+ |++++++++++++ ++|++++|+ ||||.+.+ +++|.++|+++|+++|+|++|+...+ ..+
T Consensus 139 ~-------d~~~l~~~i~~~~-~~v~~~~~~-nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~-~~~------- 198 (392)
T 3qhx_A 139 A-------DLDAVRAAIRPTT-RLIWVETPT-NPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPAL-QQP------- 198 (392)
T ss_dssp T-------CHHHHHHHCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CCG-------
T ss_pred C-------CHHHHHHhhCCCC-eEEEEECCC-CCCcEEec---HHHHHHHHHHcCCEEEEECCCccccc-CCh-------
Confidence 3 7899999998766 599999998 99999988 88999999999999999999963311 111
Q ss_pred hhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHHh
Q 043334 806 GCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 806 ~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L~ 874 (903)
. .. +..+++.|+||.+|.+| .|+||++++++++.+.+..... ....++..++++...++
T Consensus 199 --~----~~----~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 260 (392)
T 3qhx_A 199 --L----SL----GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLK 260 (392)
T ss_dssp --G----GG----TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred --H----Hh----CCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 1 11 35789999999999877 7999999997558888776543 55667777777777773
No 161
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.78 E-value=1.7e-18 Score=201.61 Aligned_cols=251 Identities=12% Similarity=0.059 Sum_probs=180.0
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccCC------CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQNM------SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLV 689 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~~------~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll 689 (903)
.++.|+ +.... ..+.+.+++.+.+..|.+ ..|..++++++++++++.+|.+. .+++++|+++++..++
T Consensus 67 ~~~~lg-~~~~~-~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~----~~~~~~ggt~a~~~al 140 (474)
T 1wyu_B 67 TFYPLG-SCTMK-YNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA----ITLEPAAGAHGELTGI 140 (474)
T ss_dssp SCCCBT-TTCCC-CCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE----EECCCSSHHHHHHHHH
T ss_pred Cccccc-ccccc-CCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc----eeecChHHHHHHHHHH
Confidence 467777 44332 234455555544434433 34566889999999999999864 3778899988888655
Q ss_pred HHh----ccCCC-----eEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCc
Q 043334 690 LCC----ILEGG-----TLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPT 760 (903)
Q Consensus 690 ~~l----~~pGD-----~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPT 760 (903)
.++ .++|| +|+++.|+|+.+...++..|++++.+++++ ++.+|+++|++++++++ ++|++++| |||
T Consensus 141 ~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i~~~t-~~v~~~~p--n~~ 215 (474)
T 1wyu_B 141 LIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKRELGPHV-AALMLTNP--NTL 215 (474)
T ss_dssp HHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHCSTTE-EEEEECSS--CTT
T ss_pred HHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhhCCCc-eEEEEECC--CCC
Confidence 443 46888 999999999999999999999999999864 57799999999998766 58888887 589
Q ss_pred ccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc-c---c
Q 043334 761 GLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG-A---L 836 (903)
Q Consensus 761 G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~-G---l 836 (903)
|.+. +++++|.++|+++|+++|+|++|....++ . .+ ...+ +..+++.|++|+|++| | .
T Consensus 216 G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g-~----~~----~~~~-------g~di~~~s~~K~~~~p~g~gG~ 277 (474)
T 1wyu_B 216 GLFE--RRILEISRLCKEAGVQLYYDGANLNAIMG-W----AR----PGDM-------GFDVVHLNLHKTFTVPHGGGGP 277 (474)
T ss_dssp SCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTT-T----CC----HHHH-------TCSEEECCTTTTTCCCCTTSCC
T ss_pred cccC--CCHHHHHHHHHHcCCEEEEeCchhhhhcc-C----CC----cccC-------CCcEEEEeCccccccCCCCCCC
Confidence 9883 35999999999999999999999654432 1 11 1111 2578899999999877 5 5
Q ss_pred eeeEEEeCcHHHHHHHHh-C------------------C--CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHH
Q 043334 837 KFGFLVLNHPQLVDAFSS-F------------------P--GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLE 895 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~-~------------------~--~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~ 895 (903)
|+||++++++ +++.+.. + . ...+.+...+.++..++. ..+ .++++++++.+.
T Consensus 278 ~~G~~~~~~~-l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~-~~g-----~~~l~~~~~~~~ 350 (474)
T 1wyu_B 278 GSGPVGVKAH-LAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIR-TLG-----LEGLKKAAALAV 350 (474)
T ss_dssp CCCCEEECGG-GGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHH-HHH-----HHHHHHHHHHHH
T ss_pred CeEEEEEcHH-HHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHH-HHH-----HHHHHHHHHHHH
Confidence 9999999987 7766641 0 0 122356677888877774 112 244555566666
Q ss_pred HHHHHHh
Q 043334 896 SRSKRLK 902 (903)
Q Consensus 896 ~Rr~~l~ 902 (903)
++++++.
T Consensus 351 ~~~~~l~ 357 (474)
T 1wyu_B 351 LNARYLK 357 (474)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665553
No 162
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.78 E-value=1.1e-19 Score=187.27 Aligned_cols=185 Identities=19% Similarity=0.185 Sum_probs=112.2
Q ss_pred cccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccccc
Q 043334 2 MVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDE 81 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~ 81 (903)
.+.|++|+|+..+..+.+.+...-....++.+|||+|||+|.++..+++..++.+|+|+|+|+.+++.|++|+..++.
T Consensus 2 ~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-- 79 (215)
T 4dzr_A 2 EVGPDCLIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-- 79 (215)
T ss_dssp BCSGGGGSCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------
T ss_pred cCCCCccCCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--
Confidence 578999999966665555544322112367899999999999999999998788999999999999999999876653
Q ss_pred CCCCcchhhhcccCCcEEEEEccccccccC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccc
Q 043334 82 KGQPIYDAEKKTLLDRVEFHESDLLAYCRD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQG 158 (903)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~ 158 (903)
+++++++|+.+.... ..++||+|++||||+.......+......+.+ ..++
T Consensus 80 ---------------~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~---------~~~~-- 133 (215)
T 4dzr_A 80 ---------------VVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEP---------RLAL-- 133 (215)
T ss_dssp ------------------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC-------------------------------
T ss_pred ---------------ceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCc---------cccc--
Confidence 689999999885443 11389999999999977665555444332211 1222
Q ss_pred cccccccHHHHHHHHHHHhhcccCCcE-EEEEeCCCCcHHHHHHHHH--HCCCeEEEEEeh
Q 043334 159 FVEDQFGLGLIARAVEEGIGVIKPSGI-MIFNMGGRPGQGVCKRLFE--RRGFRVDKLWQT 216 (903)
Q Consensus 159 ~v~~~~g~~~~~~~l~~~~~~LkpgG~-ll~~~~~~~~~~~l~~ll~--~~gf~~~~~~~~ 216 (903)
.++..+.+.+..+++++.++|||||+ +++.++... ...+.++++ +.||..+..+..
T Consensus 134 -~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~~l~~~~~gf~~~~~~~~ 192 (215)
T 4dzr_A 134 -DGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQ-ADEVARLFAPWRERGFRVRKVKD 192 (215)
T ss_dssp -----CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSC-HHHHHHHTGGGGGGTEECCEEEC
T ss_pred -cCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCcc-HHHHHHHHHHhhcCCceEEEEEe
Confidence 23567888889999999999999999 666666544 445577888 889977665433
No 163
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.78 E-value=5.4e-18 Score=195.40 Aligned_cols=256 Identities=11% Similarity=0.055 Sum_probs=180.9
Q ss_pred CCCCCeEEccCCCC--CCC-CcHHHHHHHHHHHHccCC-CC-CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 612 TPNSGLIHMDVDQS--FLP-IPSLVKAAIFESFARQNM-SE-SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 612 ~~~~~~IdLs~g~p--~~~-~p~~v~~al~~al~~y~~-~~-G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
..|...+|+..|.+ .++ .++.+.+++.+.+.++.. +. ...+.+.++++.+++.+|. + +|++++|+++++.
T Consensus 73 ~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~----~-~v~~~~sGseA~~ 147 (439)
T 2oat_A 73 VEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNY----H-KVLPMNTGVEAGE 147 (439)
T ss_dssp TTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHTC----S-EEEEESSHHHHHH
T ss_pred CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcCC----C-EEEEeCCHHHHHH
Confidence 45677899988754 455 789999999998876422 11 2345678888888887762 3 8999999999999
Q ss_pred HHHHHhc---------cCC-CeEEEcCCCcHHHH-HHHHHcC------------CEEEEecCCCCCCcccCHHHHHHHhh
Q 043334 687 KLVLCCI---------LEG-GTLCFPAGSNGNYV-SAARFLK------------ANIVNIPTESEVGFKMTEKTLVTILE 743 (903)
Q Consensus 687 ~ll~~l~---------~pG-D~Vlv~~P~y~~~~-~~~~~~G------------~~vv~v~~~~~~~f~ld~~~L~~~l~ 743 (903)
.++..+. .+| |.|++.+|+|..+. ..+...| .+++.+|. .|++++++.++
T Consensus 148 ~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~ 220 (439)
T 2oat_A 148 TACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALERALQ 220 (439)
T ss_dssp HHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHHHHTT
T ss_pred HHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHHHHhC
Confidence 9888765 367 89999999996643 3444444 45666664 27999999985
Q ss_pred cCCCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceE
Q 043334 744 TVKKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVS 822 (903)
Q Consensus 744 ~~~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI 822 (903)
... ..+++++|.+|+||. +++.+.+++|.++|++||+++|+||+|.++.+.+... . .....-.+ .+
T Consensus 221 ~~~-~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~---~----~~~~~~~~----Di- 287 (439)
T 2oat_A 221 DPN-VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL---A----VDYENVRP----DI- 287 (439)
T ss_dssp STT-EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS---G----GGGGTCCC----SE-
T ss_pred CCC-EEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch---h----HHHhCCCC----cE-
Confidence 323 356677787678996 5799999999999999999999999997765544321 1 11111111 22
Q ss_pred EEccCchhccccc-ceeeEEEeCcHHHHHHHHhC--CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHH
Q 043334 823 LLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF--PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 823 ~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~--~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr 898 (903)
+ ||||.++ +| +|+||++++++ +++.+... ..+.+.+.+.+.++.++|+.-.. +.+.+++.++++.++++.
T Consensus 288 ~--t~sK~l~-~G~~~~G~v~~~~~-~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L 360 (439)
T 2oat_A 288 V--LLGKALS-GGLYPVSAVLCDDD-IMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNEL 360 (439)
T ss_dssp E--EECGGGG-TTSSCCEEEEECHH-HHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHH
T ss_pred E--Eeccccc-CCCCCeEEEEECHH-HHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHH
Confidence 2 9999998 68 99999999987 88777653 23667788899988888842111 234455555555555543
No 164
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.78 E-value=4.2e-18 Score=196.57 Aligned_cols=241 Identities=9% Similarity=0.055 Sum_probs=166.1
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccC---CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQN---MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~---~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..|...+|+..| .+.++ .++.+.+++.+.+.+.. ...+..+.+.++++++++.++...+ +|++|+|+++++
T Consensus 41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~---~v~~~~sGseA~ 117 (448)
T 3dod_A 41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLT---RVFYSDSGAEAM 117 (448)
T ss_dssp TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEE---EEEEESSHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC---EEEEeCchHHHH
Confidence 456778999866 33444 47889999999887642 2456778899999999998765444 899999999999
Q ss_pred HHHHHHhcc----CC----CeEEEcCCCcHHHHHHHHHcCC-------------EEEEecCCCCCCccc-----------
Q 043334 686 NKLVLCCIL----EG----GTLCFPAGSNGNYVSAARFLKA-------------NIVNIPTESEVGFKM----------- 733 (903)
Q Consensus 686 ~~ll~~l~~----pG----D~Vlv~~P~y~~~~~~~~~~G~-------------~vv~v~~~~~~~f~l----------- 733 (903)
..++..+.. +| |.|++.+|+|..+...+...+. .+..++.. +.|..
T Consensus 118 ~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 195 (448)
T 3dod_A 118 EIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRDQ 195 (448)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhHH
Confidence 999988876 45 9999999999876654433332 22333332 22332
Q ss_pred CHHHHHHHhh--cCCCcEEEEECCCC-CCcc-cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhh
Q 043334 734 TEKTLVTILE--TVKKPWVYISGPTI-NPTG-LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLS 809 (903)
Q Consensus 734 d~~~L~~~l~--~~~~~~vil~~P~~-NPTG-~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~ 809 (903)
|+++|++.++ +.+ ..++++.|.+ ||+| .+.+.+++++|.++|++||++||+||+|.++.+.+... . ..
T Consensus 196 d~~~le~~l~~~~~~-~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~---a----~~ 267 (448)
T 3dod_A 196 CLRELAQLLEEHHEE-IAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF---A----CE 267 (448)
T ss_dssp HHHHHHHHHHHHGGG-EEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS---G----GG
T ss_pred HHHHHHHHHHhCCCC-EEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh---h----hh
Confidence 4788998887 223 3566777774 7777 56688889999999999999999999998776555431 1 11
Q ss_pred hhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHh-------CC--CCCCCcHHHHHHHHHHHh
Q 043334 810 KLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSS-------FP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 810 ~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~-------~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
...-.+ -+.+|||+++ .| +|+||++++++ +++.+.. .. .+.+.++++|.++.++|+
T Consensus 268 ~~~~~~-------di~t~sK~l~-~G~~~ig~v~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 333 (448)
T 3dod_A 268 HENVQP-------DLMAAGKGIT-GGYLPIAVTFATED-IYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLA 333 (448)
T ss_dssp GGTCCC-------SEEEECGGGG-TTSSCCEEEEEEHH-HHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred hcCCCC-------CEEEeccccc-CCcCceEEEEECHH-HHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHH
Confidence 111111 1347899997 49 59999999987 9998876 32 367788999999999994
No 165
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.78 E-value=1.8e-18 Score=196.75 Aligned_cols=251 Identities=10% Similarity=0.036 Sum_probs=155.3
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-ccCCC-------CC--chHHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-RQNMS-------ES--EIDVTPS 656 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-~y~~~-------~G--~~~lr~a 656 (903)
++.++..+.++....+..... ...+.++|..+++.. ++.+.+++.+.+. .|... .| ..+..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (425)
T 3ecd_A 9 FSQSLAERDASVRGAILKELE-----RQQSQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEA 81 (425)
T ss_dssp HHCCHHHHCHHHHHHHHHHHH-----HHHHSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHH-----HHhcceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHH
Confidence 344445455555554443211 112468887777654 8889999888764 22110 11 1123344
Q ss_pred H-HHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHH---HHHHHHHcCC--EEEEecCCCCCC
Q 043334 657 I-QQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGN---YVSAARFLKA--NIVNIPTESEVG 730 (903)
Q Consensus 657 l-a~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~---~~~~~~~~G~--~vv~v~~~~~~~ 730 (903)
+ ++.+++.+|.+.. .++++|+++++..++.+++++||+|+++.|+|+. +.......|. ++++++.+. ++
T Consensus 82 ~a~~~~~~~~~~~~~----~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~ 156 (425)
T 3ecd_A 82 LAIERVKRLFNAGHA----NVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DT 156 (425)
T ss_dssp HHHHHHHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TT
T ss_pred HHHHHHHHHhCCCCc----eeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-cc
Confidence 4 4778887886532 3446666778888899999999999999999987 3333334454 666777654 45
Q ss_pred cccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCC-CCccCCCCCCCCchhhhh
Q 043334 731 FKMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFS-GLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 731 f~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~-~l~f~~~~~s~~s~~~~~ 808 (903)
+.+|++++++.+++ ++ ++|++++|+ ||+. . ++++|.++|+++|++||+||+|. ++.+.+... ..+
T Consensus 157 ~~~d~~~l~~~i~~~~~-~~v~~~~~~-~~~~--~---~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~------~~~ 223 (425)
T 3ecd_A 157 MLIDYDQVEALAQQHKP-SLIIAGFSA-YPRK--L---DFARFRAIADSVGAKLMVDMAHIAGVIAAGRHA------NPV 223 (425)
T ss_dssp SSCCHHHHHHHHHHHCC-SEEEEECSC-CCSC--C---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC------CGG
T ss_pred CccCHHHHHHHHhhcCC-cEEEEcccc-CCCc--C---CHHHHHHHHHHcCCEEEEECcChHhhhhccccc------Cch
Confidence 78999999999974 55 589999998 9753 3 37899999999999999999953 333443321 111
Q ss_pred hhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC---CCCCcHHHHHHHHHHH
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG---LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~---~~~~s~~~Q~aa~~~L 873 (903)
+. ..++++|+||.+ +|+|+||++++++.+.+.+..... ..+++...+.++..++
T Consensus 224 ---~~------~di~~~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~ 280 (425)
T 3ecd_A 224 ---EH------AHVVTSTTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAF 280 (425)
T ss_dssp ---GT------CSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHH
T ss_pred ---hc------CcEEEecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHH
Confidence 11 248899999987 688999999997557777765432 2234444444444444
No 166
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.78 E-value=8.6e-18 Score=194.69 Aligned_cols=243 Identities=10% Similarity=0.006 Sum_probs=174.2
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHcc----CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQ----NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y----~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
..|...||++.| .+.++ .++.+.+++.+.+.+. ....+..+++.++++++++.++...+ +|++|+|++++
T Consensus 48 ~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~---~v~~~~gGseA 124 (460)
T 3gju_A 48 NNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMS---RVYFGLSGSDA 124 (460)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEE---EEEEESSHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcC---EEEEeCchHHH
Confidence 467789999877 34444 5688999998887653 22345678899999999998665444 89999999999
Q ss_pred HHHHHHHhcc--------CCCeEEEcCCCcHHHHHHHHHcCC-------------EEEEecCCC--C-CCcccC------
Q 043334 685 FNKLVLCCIL--------EGGTLCFPAGSNGNYVSAARFLKA-------------NIVNIPTES--E-VGFKMT------ 734 (903)
Q Consensus 685 l~~ll~~l~~--------pGD~Vlv~~P~y~~~~~~~~~~G~-------------~vv~v~~~~--~-~~f~ld------ 734 (903)
+..++.+++. +++.|++.+|+|..+...+...+. .+..++... . +++.++
T Consensus 125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 204 (460)
T 3gju_A 125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ 204 (460)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence 9999988874 468999999999876655544322 234444321 0 111233
Q ss_pred --HHHHHHHhhc---CCCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhh
Q 043334 735 --EKTLVTILET---VKKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCL 808 (903)
Q Consensus 735 --~~~L~~~l~~---~~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~ 808 (903)
+++|++.++. .+ ..+++++|.+|++|. +++.+.+++|.++|++||+++|+||+|.++...+... ..
T Consensus 205 ~~~~~le~~i~~~~~~~-~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-------~~ 276 (460)
T 3gju_A 205 HCADKLEEMILAEGPET-IAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-------GS 276 (460)
T ss_dssp HHHHHHHHHHHHHCGGG-EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-------HH
T ss_pred HHHHHHHHHHHhcCCCC-EEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-------hH
Confidence 5888888863 23 356666676577776 7788999999999999999999999998775555331 11
Q ss_pred hhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHh-------C--CCCCCCcHHHHHHHHHHHh
Q 043334 809 SKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSS-------F--PGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 809 ~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~-------~--~~~~~~s~~~Q~aa~~~L~ 874 (903)
...+-.+ . +.+|||+++ .| +|+||++++++ +++.+.. . ..+++.++++|.++.++|+
T Consensus 277 ~~~~~~p----d---i~t~sK~l~-gG~~~lg~v~~~~~-i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 343 (460)
T 3gju_A 277 DHYGIKP----D---LITIAKGLT-SAYAPLSGVIVADR-VWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLE 343 (460)
T ss_dssp HHHTCCC----S---EEEECGGGT-TTSSCCEEEEEEHH-HHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred hhcCCCC----C---eeeeehhhc-CCCCCeEEEEECHH-HHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 2222222 1 337899987 45 89999999887 9998852 1 2377889999999999995
No 167
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.78 E-value=5.3e-18 Score=193.98 Aligned_cols=259 Identities=12% Similarity=0.080 Sum_probs=179.6
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..|...|||..|. +.++ .++.+.+++.+.+.......+..+++.+++++++++++ .++ +|++++|+++++..+
T Consensus 49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~ea~~~a 124 (424)
T 2e7u_A 49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYP---FVD-LVRFVNSGTEATMSA 124 (424)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCT---TCC-EEEEESSHHHHHHHH
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC---CCC-EEEEeCCHHHHHHHH
Confidence 3566789998775 3444 68899999999887632223456778999999998875 234 899999999999988
Q ss_pred HHH--hccCCCeEEEcCCCcHHHHHHHH--------------HcCC------EEEEecCCCCCCcccCHHHHHHHhhcC-
Q 043334 689 VLC--CILEGGTLCFPAGSNGNYVSAAR--------------FLKA------NIVNIPTESEVGFKMTEKTLVTILETV- 745 (903)
Q Consensus 689 l~~--l~~pGD~Vlv~~P~y~~~~~~~~--------------~~G~------~vv~v~~~~~~~f~ld~~~L~~~l~~~- 745 (903)
+.. .+.+++.|++.+|+|..+...+. ..|. +++.+|. .|++.+++.+++.
T Consensus 125 l~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~ 197 (424)
T 2e7u_A 125 LRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKRRG 197 (424)
T ss_dssp HHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHG
T ss_pred HHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHhCC
Confidence 875 23345889999999987543221 1121 3445543 3789999888631
Q ss_pred CCcEEEEECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEE
Q 043334 746 KKPWVYISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLL 824 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l 824 (903)
.+..+++++|++++||.++ +.+++++|.++ ++||++||+||+|.++ ..+.. .........+ . +
T Consensus 198 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-------~~~~~~~~~~----d---i 261 (424)
T 2e7u_A 198 EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-------GATELLGLKP----D---L 261 (424)
T ss_dssp GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-------HHHHHHTCCC----S---E
T ss_pred CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-------HHHHHhCCCc----c---h
Confidence 1236788889833499765 79999999999 9999999999999876 33322 1122222222 2 2
Q ss_pred ccCchhcccccceeeEEEeCcHHHHHHHHhC----C-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 825 GGLSLKMLTGALKFGFLVLNHPQLVDAFSSF----P-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 825 ~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~----~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
.||||+++ +|+|+||++++++ +++.+... . .+.+.+.++|.++.++|+.-.. .+.+.+++.++++.++++.+
T Consensus 262 ~s~sK~l~-~G~~~G~~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~l~~~L~ 338 (424)
T 2e7u_A 262 VTLGKILG-GGLPAAAYAGRRE-IMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE-NPGYYAYLEDLGARLEAGLK 338 (424)
T ss_dssp EEECGGGG-TTSSCEEEEECHH-HHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH-CTHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhh-CCcceEEEEEcHH-HHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHH
Confidence 39999998 5999999999987 88887752 1 2557788999999888842111 13355666666666666654
Q ss_pred H
Q 043334 900 R 900 (903)
Q Consensus 900 ~ 900 (903)
.
T Consensus 339 ~ 339 (424)
T 2e7u_A 339 E 339 (424)
T ss_dssp H
T ss_pred H
Confidence 4
No 168
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.78 E-value=5.9e-18 Score=192.21 Aligned_cols=203 Identities=14% Similarity=0.115 Sum_probs=153.3
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHc-cCCC-------CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFAR-QNMS-------ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~-y~~~-------~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
++.+.|+.+.+. ++|+.+.+++.+.+.. ++.. .|..+..+.+++.+++++|.+. + +|++|+|+++++.
T Consensus 27 ~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~--~-~v~~~~g~t~al~ 102 (416)
T 1qz9_A 27 EGVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARD--G-EVVVTDTTSINLF 102 (416)
T ss_dssp TTCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCT--T-SEEECSCHHHHHH
T ss_pred CCeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCc--c-cEEEeCChhHHHH
Confidence 467899988876 6678889999888864 2211 1334667788999999888753 3 8999999999998
Q ss_pred HHHHHhc------cCCCe-EEEcCCCcHHHHHHH----HHc--CCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEE
Q 043334 687 KLVLCCI------LEGGT-LCFPAGSNGNYVSAA----RFL--KANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYIS 753 (903)
Q Consensus 687 ~ll~~l~------~pGD~-Vlv~~P~y~~~~~~~----~~~--G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~ 753 (903)
.++.+++ ++||+ |+++.++|+.+...+ +.. |++++.+++ ++++++.+++++ ++|+++
T Consensus 103 ~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~~-~~v~~~ 172 (416)
T 1qz9_A 103 KVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQDT-AVVMLT 172 (416)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTTE-EEEEEE
T ss_pred HHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCCc-eEEEEe
Confidence 8888776 89996 566667888755443 334 999999986 567888887655 589999
Q ss_pred CCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccc
Q 043334 754 GPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLT 833 (903)
Q Consensus 754 ~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~ 833 (903)
+|+ ||||.+++ +++|.++|+++|++||+|++|+. +... .+ +..+ +..+++.|+||.++
T Consensus 173 ~~~-nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---g~~~---~~----~~~~-------~~d~~~~s~~K~l~- 230 (416)
T 1qz9_A 173 HVN-YKTGYMHD---MQALTALSHECGALAIWDLAHSA---GAVP---VD----LHQA-------GADYAIGCTYKYLN- 230 (416)
T ss_dssp SBC-TTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT---TTSC---CC----HHHH-------TCSEEEECSSSTTC-
T ss_pred ccc-cCcccccC---HHHHHHHHHHcCCEEEEEccccc---cCcC---CC----hhhc-------CCCEEEecCcccCC-
Confidence 998 99999998 78999999999999999999962 2111 11 1111 24688999999874
Q ss_pred cccee-eEEEeCcHHHHHHHHh
Q 043334 834 GALKF-GFLVLNHPQLVDAFSS 854 (903)
Q Consensus 834 ~GlRi-G~lv~~~~~li~~l~~ 854 (903)
+|.|+ ||++++++ +++.+..
T Consensus 231 ~g~~~~g~l~~~~~-~~~~l~~ 251 (416)
T 1qz9_A 231 GGPGSQAFVWVSPQ-LCDLVPQ 251 (416)
T ss_dssp CCTTCCCEEEECTT-TTTTSCC
T ss_pred CCCCCeEEEEECHH-HHhccCC
Confidence 68888 99999987 7665543
No 169
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.78 E-value=4.8e-18 Score=194.96 Aligned_cols=259 Identities=12% Similarity=0.062 Sum_probs=179.5
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..+...+|++.|. +.++ .++.+.+++.+.+.+.....+..+++.++++.+++.++ .++ +|++++|+++++..+
T Consensus 53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~~~-~v~~~~sgseA~~~a 128 (434)
T 2epj_A 53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVK---RGG-MIRFVNSGTEATMTA 128 (434)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHC---TTC-EEEEESSHHHHHHHH
T ss_pred CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC---CCC-EEEEeCCHHHHHHHH
Confidence 3567789998775 3343 68889999999887632223456678889999988874 234 899999999999998
Q ss_pred HHHh--ccCCCeEEEcCCCcHHHHHHHH--------------HcCC------EEEEecCCCCCCcccCHHHHHHHhhcC-
Q 043334 689 VLCC--ILEGGTLCFPAGSNGNYVSAAR--------------FLKA------NIVNIPTESEVGFKMTEKTLVTILETV- 745 (903)
Q Consensus 689 l~~l--~~pGD~Vlv~~P~y~~~~~~~~--------------~~G~------~vv~v~~~~~~~f~ld~~~L~~~l~~~- 745 (903)
+... ..+++.|++.+|+|..+...+. ..|+ +++.++. .|++++++.+++.
T Consensus 129 l~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~ 201 (434)
T 2epj_A 129 IRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAEYG 201 (434)
T ss_dssp HHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHG
T ss_pred HHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHhCC
Confidence 8861 3456788888899876433211 1232 3555553 2789999988741
Q ss_pred CCcEEEEECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEE
Q 043334 746 KKPWVYISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLL 824 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l 824 (903)
.+..+++++|++||||.++ +.+++++|.++|++||+++|+||+|.++ ..+.. .........+ . +
T Consensus 202 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-------~~~~~~~~~~----d---i 266 (434)
T 2epj_A 202 DRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-------GAQGYFNIEG----D---I 266 (434)
T ss_dssp GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-------HHHHHHTCCC----S---E
T ss_pred CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-------hhhHHhCCCC----C---e
Confidence 1236777888767899876 7999999999999999999999999876 32321 1122222222 1 3
Q ss_pred ccCchhcccccceeeEEEeCcHHHHHHHHhC----C-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 825 GGLSLKMLTGALKFGFLVLNHPQLVDAFSSF----P-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 825 ~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~----~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
.||||.++. |+|+||++++++ +++.+... . .+.+.+.+++.++.++|+.-.. +.+.+++.+.++.++++.+
T Consensus 267 ~s~sK~l~~-G~~~G~v~~~~~-~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~--~~~~~~~~~~~~~l~~~L~ 342 (434)
T 2epj_A 267 IVLGKIIGG-GFPVGAVAGSRE-VMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE--EPVYSVSREAAKALEEAAS 342 (434)
T ss_dssp EEEEGGGGT-TSSCEEEEECHH-HHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHHHH
T ss_pred eeecchhcC-CcceeeeeecHH-HHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 499999985 999999999986 88877652 2 2557788899888888842111 2345566666666666554
Q ss_pred H
Q 043334 900 R 900 (903)
Q Consensus 900 ~ 900 (903)
.
T Consensus 343 ~ 343 (434)
T 2epj_A 343 E 343 (434)
T ss_dssp H
T ss_pred H
Confidence 3
No 170
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.77 E-value=4.6e-18 Score=194.54 Aligned_cols=258 Identities=11% Similarity=0.048 Sum_probs=175.3
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..|...+|++.|. +.++ .++.+.+++.+.+.+.....+..+.+.++++++++.++ . ++ +|++|+|+++++..+
T Consensus 49 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~--~~-~v~~~~ggsea~~~a 124 (427)
T 3fq8_A 49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-S--IE-MVRFVNSGTEACMAV 124 (427)
T ss_dssp TTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-T--CS-EEEEESSHHHHHHHH
T ss_pred CCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCC-C--CC-EEEEeCCHHHHHHHH
Confidence 4577899998775 4444 58899999999886643222356788999999999876 3 34 899999999999998
Q ss_pred HHHhc--cCCCeEEEcCCCcHHHHHHHHHc-CC-------------------EEEEecCCCCCCcccCHHHHHHHhhcC-
Q 043334 689 VLCCI--LEGGTLCFPAGSNGNYVSAARFL-KA-------------------NIVNIPTESEVGFKMTEKTLVTILETV- 745 (903)
Q Consensus 689 l~~l~--~pGD~Vlv~~P~y~~~~~~~~~~-G~-------------------~vv~v~~~~~~~f~ld~~~L~~~l~~~- 745 (903)
+.... ..++.|++.+|+|..+...+... |. .++.++. -|+++|++.+++.
T Consensus 125 l~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~ 197 (427)
T 3fq8_A 125 LRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKALFAENP 197 (427)
T ss_dssp HHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHHHHHHST
T ss_pred HHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHHHHHhCC
Confidence 84332 24578999999986543322111 11 1222222 1799999998763
Q ss_pred CCcEEEEECCCCCCcccCCC-HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEE
Q 043334 746 KKPWVYISGPTINPTGLLYS-NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLL 824 (903)
Q Consensus 746 ~~~~vil~~P~~NPTG~v~s-~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l 824 (903)
....+++++|.+|++|.+.+ .+++++|.++|++||++||+||+|.++ ..+... ........ .-+
T Consensus 198 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-------~~~~~~~~-------~di 262 (427)
T 3fq8_A 198 GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-------VQEKFGVT-------PDL 262 (427)
T ss_dssp TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-------HHHHTTCC-------CSE
T ss_pred CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-------hhHhcCCC-------CCh
Confidence 12356666666477777665 566999999999999999999999876 443321 11222211 124
Q ss_pred ccCchhcccccceeeEEEeCcHHHHHHHHhC-----CCCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 825 GGLSLKMLTGALKFGFLVLNHPQLVDAFSSF-----PGLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 825 ~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~-----~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
.||||+++ +|+|+||++++++ +++.+... ...++.+.+.+.++.++|+.-.. +.+.+.+.+.++.++++.+
T Consensus 263 ~t~sK~~~-~G~~~G~~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~~~~l~ 338 (427)
T 3fq8_A 263 TTLGKIIG-GGLPVGAYGGKRE-IMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ--PGTYEYLDQITKRLSDGLL 338 (427)
T ss_dssp EEECGGGG-TTSSCEEEEECHH-HHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhh-CCcceEEEEEcHH-HHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 68999998 8999999999887 88888752 22566789999999988852111 2344555555555555443
No 171
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.77 E-value=7.8e-18 Score=197.80 Aligned_cols=178 Identities=12% Similarity=0.103 Sum_probs=147.6
Q ss_pred CchHHHHHHHHHHHhhcCCCCCCCCcE--EecCchHHHHHHHHHHhccCC--------CeEEEcCCCcHHHHHHHHHcCC
Q 043334 649 SEIDVTPSIQQYIKSNFGFPIDINAEF--IYADCSQSLFNKLVLCCILEG--------GTLCFPAGSNGNYVSAARFLKA 718 (903)
Q Consensus 649 G~~~lr~ala~~l~~~~G~~~~pe~~I--~vt~Gs~~al~~ll~~l~~pG--------D~Vlv~~P~y~~~~~~~~~~G~ 718 (903)
+...+.+++++++++.+|.+.+++ ++ ++|+|+++++..++.++.++| |+|+++.|+|..+...++..|+
T Consensus 136 ~~~~le~~l~~~la~~~g~~~~~~-~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~ 214 (514)
T 3mad_A 136 STAKFEAEVVAMTAHMLGGDAAGG-TVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGI 214 (514)
T ss_dssp HHHHHHHHHHHHHHHHTTGGGGTS-CCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCCccC-CcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCC
Confidence 345677889999999999886444 67 999999999999999998887 9999999999999999999999
Q ss_pred EEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccC---
Q 043334 719 NIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFN--- 795 (903)
Q Consensus 719 ~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~--- 795 (903)
+++.+|++. ++.+|+++|++++++++ ++|++++|+ ||||.+.+ +++|.++|+++|++||+|++|+++.+.
T Consensus 215 ~v~~v~~~~--~~~~d~~~Le~~i~~~~-~~v~~~~~~-nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~~~~ 287 (514)
T 3mad_A 215 KLVRTPLDA--DYRADVAAMREAITPNT-VVVAGSAPG-YPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILPWAE 287 (514)
T ss_dssp EEEEECBCT--TSCBCHHHHHHHCCTTE-EEEEEETTC-TTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHHHHH
T ss_pred eeEEeeeCC--CCCCCHHHHHHHhccCC-EEEEEeCCC-CCCccccC---HHHHHHHHHHhCCeEEEecccccccchhHH
Confidence 999999975 67899999999998766 589999998 99999988 788999999999999999999876541
Q ss_pred --CCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 796 --YEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 796 --~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
+...+ . +.. .. .+..+++.|++|.+ .+|.++||++++++
T Consensus 288 ~~g~~~~-----~-~~~--~~---~g~d~~~~s~~K~l-~~~~~~g~~~~~~~ 328 (514)
T 3mad_A 288 RLGYPVP-----P-FDF--RL---EGVTSVSADTHKYG-YGAKGTSVILYRRP 328 (514)
T ss_dssp HTTCCCC-----C-CST--TS---TTCCEEEECTTTTT-CCCSSCEEEEESSH
T ss_pred hcCCCCC-----c-ccc--cC---CCCcEEEECchhcc-CCCCCeEEEEEeCH
Confidence 11100 0 110 01 13578899999986 47889999999987
No 172
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.77 E-value=1.4e-17 Score=187.91 Aligned_cols=204 Identities=13% Similarity=0.147 Sum_probs=146.7
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHcc--C-CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQ--N-MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLC 691 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y--~-~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~ 691 (903)
+++++++.|.|.++ +.+.+++.+.+... . ...+..+++++++++ +|.+ ++++++|+++++..++.+
T Consensus 22 ~~~~~l~~~~p~~~--~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~----~~~~-----~~i~~~~gt~al~~~l~~ 90 (391)
T 3dr4_A 22 SDLPRISVAAPRLD--GNERDYVLECMDTTWISSVGRFIVEFEKAFADY----CGVK-----HAIACNNGTTALHLALVA 90 (391)
T ss_dssp ------CCCCCCCC--SSHHHHHHHHHHHTCCSSCSHHHHHHHHHHHHH----HTCS-----EEEEESSHHHHHHHHHHH
T ss_pred CCCceeccCCCCCC--HHHHHHHHHHHHcCCccCCChHHHHHHHHHHHH----hCCC-----cEEEeCCHHHHHHHHHHH
Confidence 46889999998664 66777777776542 2 233444555555554 4543 466777778999999999
Q ss_pred h-ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 692 C-ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 692 l-~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
+ +++||+|+++.|+|+.+...++..|++++.+++++ ++|.+|++.+++.+++++ ++|+ |+ ||||.+.+ ++
T Consensus 91 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~-~~v~---~~-n~tG~~~~---~~ 161 (391)
T 3dr4_A 91 MGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRT-KAIM---PV-HLYGQICD---MD 161 (391)
T ss_dssp HTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTE-EEEC---CB-CGGGCCCC---HH
T ss_pred cCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCc-eEEE---EE-CCCCChhh---HH
Confidence 9 99999999999999999999999999999999975 457899999999987654 3444 77 99999877 78
Q ss_pred HHHHHHHhCCcEEEEecCCCC-CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 771 NILTVCAKYGARVVIDTAFSG-LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~-l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
+|.++|+++|++||+|++|+. ..+.+... ... ..+.+.||||..+++|.+.||++++++.+.
T Consensus 162 ~i~~l~~~~~~~li~D~a~~~g~~~~~~~~------------~~~-----~di~~~S~s~~K~l~~g~gg~~~~~~~~~~ 224 (391)
T 3dr4_A 162 PILEVARRHNLLVIEDAAEAVGATYRGKKS------------GSL-----GDCATFSFFGNAIITTGEGGMITTNDDDLA 224 (391)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCEETTEET------------TSS-----SSEEEEECBTTSSSCCBSCEEEEESCHHHH
T ss_pred HHHHHHHHcCCEEEEECcccccceECCeee------------ccc-----CCEEEEECCCCCcCCcCCeEEEEECCHHHH
Confidence 899999999999999999974 33332210 111 136778877333445678999999887677
Q ss_pred HHHHhC
Q 043334 850 DAFSSF 855 (903)
Q Consensus 850 ~~l~~~ 855 (903)
+.+...
T Consensus 225 ~~~~~~ 230 (391)
T 3dr4_A 225 AKMRLL 230 (391)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776543
No 173
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.77 E-value=4.6e-18 Score=196.61 Aligned_cols=243 Identities=9% Similarity=0.016 Sum_probs=170.7
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHcc---CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQ---NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y---~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..|...+|+..| .+.++ .++.+.+++.+.+.+. ....+..+.+.++++++++.++... ++ +|++|+|+++++
T Consensus 58 ~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~-~v~~~~sGseA~ 135 (451)
T 3oks_A 58 VDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRG-DK-RSALFNSGSEAV 135 (451)
T ss_dssp TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCS-SE-EEEEESSHHHHH
T ss_pred CCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCC-CC-EEEEeCcHHHHH
Confidence 466778999876 45555 4889999999888653 2234677888999999999876432 23 899999999999
Q ss_pred HHHHHHhcc--CCCeEEEcCCCcHHHHHHHHHcCC--------------EEEEecCCCC----------CCcc-cCHHHH
Q 043334 686 NKLVLCCIL--EGGTLCFPAGSNGNYVSAARFLKA--------------NIVNIPTESE----------VGFK-MTEKTL 738 (903)
Q Consensus 686 ~~ll~~l~~--pGD~Vlv~~P~y~~~~~~~~~~G~--------------~vv~v~~~~~----------~~f~-ld~~~L 738 (903)
..++..... .++.|++.+++|..+...+...+. .+..+|.... +++. -+++.+
T Consensus 136 ~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 215 (451)
T 3oks_A 136 ENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRA 215 (451)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHH
Confidence 999877654 448999999999876655544322 3455554310 0000 123444
Q ss_pred HHHhh----cCCCcEEEEECCCCCCcc--cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhc
Q 043334 739 VTILE----TVKKPWVYISGPTINPTG--LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLY 812 (903)
Q Consensus 739 ~~~l~----~~~~~~vil~~P~~NPTG--~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~ 812 (903)
++.+. +.+ .+++++.|. |++| .+.+.+.+++|.++|++||++||+||+|.++.+.+... . .....
T Consensus 216 ~~~l~~~~~~~~-~aavi~ep~-~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~---~----~~~~~ 286 (451)
T 3oks_A 216 ITVIDKQIGADN-LAAVVIEPI-QGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMF---A----CEHEG 286 (451)
T ss_dssp HHHHHHHTCGGG-EEEEEECSS-BTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS---G----GGGGT
T ss_pred HHHHHhhcCCCC-EEEEEEcCC-cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccch---h----hhhcC
Confidence 44443 233 478888998 6666 34477789999999999999999999998776555431 1 12222
Q ss_pred cCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCCCcHHHHHHHHHHHh
Q 043334 813 SSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 813 ~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~~s~~~Q~aa~~~L~ 874 (903)
..+ . +.||||+++. |||+||++++++ +++.+.... .+++.+++.|.++.++|+
T Consensus 287 ~~p----d---i~t~sK~l~~-G~~iG~v~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 341 (451)
T 3oks_A 287 IDP----D---LIVTAKGIAG-GLPLSAVTGRAE-IMDSPHVSGLGGTYGGNPIACAAALATIE 341 (451)
T ss_dssp CCC----S---EEEECGGGGT-TSSCEEEEEEHH-HHTCSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred CCC----C---eeeehhhhhC-CcceEEEEECHH-HHhhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence 221 1 2389999985 999999999877 888776443 377889999999999995
No 174
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.77 E-value=1.8e-18 Score=201.84 Aligned_cols=227 Identities=7% Similarity=-0.040 Sum_probs=161.1
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-cC---CC---C----CchHHHH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-QN---MS---E----SEIDVTP 655 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-y~---~~---~----G~~~lr~ 655 (903)
+++++..+.++.+..+..... ...+.|+|..+++ ++|+.+++++.+.+.. |. +. + +..++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~L~a~e~--~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~ 93 (483)
T 1rv3_A 21 LAQPLKDSDAEVYDIIKKESN-----RQRVGLELIASEN--FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELET 93 (483)
T ss_dssp TTSCHHHHCHHHHHHHHHHHH-----HHHSSEECCTTCC--CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHH
T ss_pred HhhhhhhcCHHHHHHHHHHHH-----HhhcCeEEEcCCC--CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHH
Confidence 344444444444555443221 1246899988876 3688899998887754 21 10 1 1356678
Q ss_pred HHHHHHHhhcCCCCCC-CCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH--------HHHcC--CEEEEec
Q 043334 656 SIQQYIKSNFGFPIDI-NAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA--------ARFLK--ANIVNIP 724 (903)
Q Consensus 656 ala~~l~~~~G~~~~p-e~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~--------~~~~G--~~vv~v~ 724 (903)
.+++++++.+|.+.+. ..+|++++|+ +++..++.++++|||+|++++|+|+++... +...| .++++++
T Consensus 94 ~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~ 172 (483)
T 1rv3_A 94 LCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYK 172 (483)
T ss_dssp HHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEEC
T ss_pred HHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECc
Confidence 8889999999987531 0159999999 777777888999999999999988876532 23344 5667776
Q ss_pred CCCCCCcccCHHHHHHHhh-cCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCC-CCccCCCCCCCC
Q 043334 725 TESEVGFKMTEKTLVTILE-TVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFS-GLEFNYEGWGGW 802 (903)
Q Consensus 725 ~~~~~~f~ld~~~L~~~l~-~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~-~l~f~~~~~s~~ 802 (903)
+++ ++|.+|+++|++.++ .++ ++|++ +++ ||+ .+++ +++|.++|+++|++||+|++|. ++.+.+...
T Consensus 173 ~~~-~~~~iD~d~le~~i~~~~t-klIi~-~~s-n~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~--- 241 (483)
T 1rv3_A 173 VNP-DTGYIDYDRLEENARLFHP-KLIIA-GTS-CYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVP--- 241 (483)
T ss_dssp BCT-TTCSBCHHHHHHHHHHHCC-SEEEE-CCS-SCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSC---
T ss_pred ccc-CCCcCCHHHHHHHHhhcCC-cEEEE-eCC-cCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCC---
Confidence 664 358899999999998 666 47777 887 998 8887 8899999999999999999985 344433221
Q ss_pred chhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 803 DLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 803 s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
..+ + ...+++.|+||++ +|+|.||++++++
T Consensus 242 ---~p~---~------~~div~~s~~K~l--~GprgG~i~~~~~ 271 (483)
T 1rv3_A 242 ---SPF---E------HCHVVTTTTHKTL--RGCRAGMIFYRRG 271 (483)
T ss_dssp ---CGG---G------TCSEEEEESSGGG--CCCSCEEEEEECS
T ss_pred ---CCC---C------CCcEEEecCcccC--CCCCceEEEEcch
Confidence 011 1 1357899999987 5999999999874
No 175
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.77 E-value=1.5e-17 Score=192.00 Aligned_cols=188 Identities=16% Similarity=0.115 Sum_probs=145.5
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH----HHHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA----ARFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~----~~~~G~~vv~v~~~ 726 (903)
.+..+.+++.+++.+|.+ + .|++++|+ +++..++.+++++||+|+++.|+|+.+... ++..|++++.++.+
T Consensus 113 ~~~~~~l~~~lA~l~g~~-~---~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 187 (445)
T 1qgn_A 113 NPTTVVLEEKISALEGAE-S---TLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA 187 (445)
T ss_dssp CHHHHHHHHHHHHHHTCS-E---EEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS
T ss_pred ChHHHHHHHHHHHHhCCC-c---EEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 355677888888888874 2 68888887 999999999999999999999999987764 45679999999863
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
|++++++++++++.++|++++|+ ||||.+.+ +++|.++|+++|+++|+|++|....+. .+
T Consensus 188 -------d~~~l~~ai~~~tv~lV~le~p~-NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~-~~-------- 247 (445)
T 1qgn_A 188 -------DVGALELALNQKKVNLFFTESPT-NPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ-KA-------- 247 (445)
T ss_dssp -------CHHHHHHHHHHSCEEEEEEESSC-TTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-CT--------
T ss_pred -------CHHHHHHHhccCCCCEEEEeCCC-CCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-Cc--------
Confidence 78999999988773499999998 99999998 789999999999999999999643211 11
Q ss_pred hhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
. .. +..++++|+||.+|..| .|+||++++++ +++.+..... ....+....+++...+
T Consensus 248 -~----~~----g~Div~~S~sK~~gg~gd~~~G~l~~~~~-l~~~l~~~~~~~g~~~~~~~a~~~~~~l 307 (445)
T 1qgn_A 248 -L----AL----GADLVLHSATKFLGGHNDVLAGCISGPLK-LVSEIRNLHHILGGALNPNAAYLIIRGM 307 (445)
T ss_dssp -T----TT----TCSEEEECTTTTTTCSSSCCCEEEEECHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHG
T ss_pred -c----cc----CCEEEEECCcccccccccceEEEEEECHH-HHHHHHHHHHHhCCCCCHHHHHHHHHhH
Confidence 1 11 35689999999998655 47999999887 8888765443 2224444445444445
No 176
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.76 E-value=4.6e-18 Score=193.17 Aligned_cols=185 Identities=12% Similarity=0.104 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH----HHHHcCCEEEEecCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS----AARFLKANIVNIPTES 727 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~----~~~~~G~~vv~v~~~~ 727 (903)
+..+.+++.+++++|.+ + .|++++| ++++..++. ++++||+|+++.|+|++... .++..|++++.++++
T Consensus 55 ~~~~~lr~~la~~~g~~-~---~i~~~sG-t~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~- 127 (393)
T 1n8p_A 55 PNRENLERAVAALENAQ-Y---GLAFSSG-SATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL- 127 (393)
T ss_dssp HHHHHHHHHHHHHTTCS-E---EEEESCH-HHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH-
T ss_pred hhHHHHHHHHHHHhCCC-c---EEEECCh-HHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC-
Confidence 34556666677777764 2 5777777 799999999 89999999999999985544 346679999999873
Q ss_pred CCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhC----CcEEEEecCCCCCccCCCCCCCCc
Q 043334 728 EVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKY----GARVVIDTAFSGLEFNYEGWGGWD 803 (903)
Q Consensus 728 ~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~----~i~VI~DeaY~~l~f~~~~~s~~s 803 (903)
| +++++++++++ ++|++++|+ ||||.+++ +++|.++|+++ |+++|+|++|+.+.+. .
T Consensus 128 ------d-~~l~~~i~~~t-~lv~~~~~~-nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~----- 188 (393)
T 1n8p_A 128 ------L-NDLPQLIKENT-KLVWIETPT-NPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--N----- 188 (393)
T ss_dssp ------H-HHHHHHSCSSE-EEEEECSSC-TTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--C-----
T ss_pred ------h-HHHHHhcccCc-eEEEEECCC-CCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--C-----
Confidence 6 88999888766 589999998 99999998 88899999999 9999999999765442 1
Q ss_pred hhhhhhhhccCCCCCCceEEEccCchhccccccee-eEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 804 LEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF-GFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 804 ~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi-G~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
... + +.++++.|+||.+|.+|+|+ ||++++++++++.+..... ....+...+.++...+
T Consensus 189 ---~~~-~-------~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l 250 (393)
T 1n8p_A 189 ---PLN-F-------GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGL 250 (393)
T ss_dssp ---GGG-G-------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred ---HHH-c-------CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 111 1 25799999999999999999 9999964448888776533 2344555666555555
No 177
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.76 E-value=1.4e-17 Score=186.41 Aligned_cols=204 Identities=11% Similarity=0.038 Sum_probs=152.4
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-c
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-I 693 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~ 693 (903)
.++++++.+.|+++. +.+++.+.+..... +..+..+.+++.+++++|.+ ++++++|+++++..++.++ +
T Consensus 6 ~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~~~~-----~~~~~~~gt~a~~~~~~~~~~ 75 (374)
T 3uwc_A 6 VPYSYLERQFADIEP---YLNDLREFIKTADF--TLGAELEKFEKRFAALHNAP-----HAIGVGTGTDALAMSFKMLNI 75 (374)
T ss_dssp BCSCCHHHHTSSCHH---HHHHHHHHHHHTCC--SSCHHHHHHHHHHHHHTTCS-----EEEEESCHHHHHHHHHHHTTC
T ss_pred ceeeccccCCCCchH---HHHHHHHHHHcCCc--ccChhHHHHHHHHHHHhCCC-----cEEEeCCHHHHHHHHHHHcCC
Confidence 457788888776543 78888877654322 22233344455555555543 4777777788999999999 9
Q ss_pred cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 694 LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 694 ~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
++||+|+++.|+|+.+...++..|++++.++++ +++.+|++++++.+++++ ++|+ |+ ||||.+.+ +++|.
T Consensus 76 ~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~-~~v~---~~-n~~G~~~~---~~~i~ 145 (374)
T 3uwc_A 76 GAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKT-KAIM---PV-HYTGNIAD---MPALA 145 (374)
T ss_dssp CTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTE-EEEC---CB-CGGGCCCC---HHHHH
T ss_pred CCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCc-eEEE---Ee-CCcCCcCC---HHHHH
Confidence 999999999999999999999999999999997 467799999999987654 3444 87 99999987 88899
Q ss_pred HHHHhCCcEEEEecCCCCC-ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc--hhcccccceeeEEEeCcHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGL-EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS--LKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l-~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S--K~~g~~GlRiG~lv~~~~~li~ 850 (903)
++|+++|+++|+|++|+.. .|++... .. ...+++.|+| |.++.+|. .||++++++++.+
T Consensus 146 ~~~~~~~~~li~D~~~~~g~~~~~~~~------------~~-----~~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~ 207 (374)
T 3uwc_A 146 KIAKKHNLHIVEDACQTILGRINDKFV------------GS-----WGQFACFSLHPLKNLNVWSD-AGVIITHSDEYAE 207 (374)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETTEET------------TS-----SSSEEEEECSSSSSSCCSSC-CEEEEESCHHHHH
T ss_pred HHHHHcCCEEEEeCCCccCceeCCeec------------cc-----cccEEEEeCCCCCcCCccce-eEEEEeCCHHHHH
Confidence 9999999999999999753 2332221 11 1356778866 99975575 8999998866777
Q ss_pred HHHhCC
Q 043334 851 AFSSFP 856 (903)
Q Consensus 851 ~l~~~~ 856 (903)
.+....
T Consensus 208 ~~~~~~ 213 (374)
T 3uwc_A 208 KLRLYR 213 (374)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 776543
No 178
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.76 E-value=8e-18 Score=188.60 Aligned_cols=211 Identities=13% Similarity=0.096 Sum_probs=155.1
Q ss_pred CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcH
Q 043334 629 IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNG 707 (903)
Q Consensus 629 ~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~ 707 (903)
.++.+.+++.+.+...... ..+..+.+++.+++++|.+ ++++++|+++++..++.++ +++||+|+++.|+|+
T Consensus 14 ~~~~v~~a~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~-----~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~ 86 (367)
T 3nyt_A 14 IKDKIDAGIQRVLRHGQYI--LGPEVTELEDRLADFVGAK-----YCISCANGTDALQIVQMALGVGPGDEVITPGFTYV 86 (367)
T ss_dssp HHHHHHHHHHHHHHHCCCS--SCHHHHHHHHHHHHHHTCS-----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCT
T ss_pred cCHHHHHHHHHHHhcCCcc--CChHHHHHHHHHHHHhCCC-----cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccH
Confidence 4567777777776553222 1222344445555555643 5888888899999999998 899999999999999
Q ss_pred HHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEec
Q 043334 708 NYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDT 787 (903)
Q Consensus 708 ~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~De 787 (903)
.+...++..|++++.+++++ ++|.+|++++++++++++ ++|+ |+ ||||...+ +++|.++|+++|++||+|+
T Consensus 87 ~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~-~~v~---~~-~~~G~~~~---~~~i~~la~~~~~~li~D~ 157 (367)
T 3nyt_A 87 ATAETVALLGAKPVYVDIDP-RTYNLDPQLLEAAITPRT-KAII---PV-SLYGQCAD---FDAINAIASKYGIPVIEDA 157 (367)
T ss_dssp HHHHHHHHTTCEEEEECBCT-TTCSBCGGGTGGGCCTTE-EEEC---CB-CGGGCCCC---HHHHHHHHHHTTCCBEEEC
T ss_pred HHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHhcCcCC-cEEE---ee-CCccChhh---HHHHHHHHHHcCCEEEEEC
Confidence 99999999999999999975 357899999999987655 2444 87 99998876 8889999999999999999
Q ss_pred CCCC-CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccC--chhcccccceeeEEEeCcHHHHHHHHhCCC-------
Q 043334 788 AFSG-LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGL--SLKMLTGALKFGFLVLNHPQLVDAFSSFPG------- 857 (903)
Q Consensus 788 aY~~-l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~--SK~~g~~GlRiG~lv~~~~~li~~l~~~~~------- 857 (903)
+|+. ..+++... ... ..+++.|| +|.++.+|. .|+++++++++.+.+.....
T Consensus 158 a~~~g~~~~~~~~------------~~~-----~di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~ 219 (367)
T 3nyt_A 158 AQSFGASYKGKRS------------CNL-----STVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRY 219 (367)
T ss_dssp TTTTTCEETTEET------------TSS-----SSEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETT
T ss_pred ccccCCeECCeec------------cCC-----CCEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCc
Confidence 9963 33443221 111 25788897 899986687 89999987668887776432
Q ss_pred -------CCCCcHHHHHHHHHHH
Q 043334 858 -------LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 858 -------~~~~s~~~Q~aa~~~L 873 (903)
....+.....++...+
T Consensus 220 ~~~~~g~~~~~~~~~aa~~~~~l 242 (367)
T 3nyt_A 220 HHIRVGVNSRLDTLQAAILLPKL 242 (367)
T ss_dssp EECSCCCBCCCCHHHHHHHHHHH
T ss_pred eeeccCcCCCccHHHHHHHHHHH
Confidence 2345555555555555
No 179
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.76 E-value=9.5e-18 Score=192.27 Aligned_cols=242 Identities=10% Similarity=0.009 Sum_probs=165.7
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..|...+|+..|. +.++ .++.+.+++.+.+.+.....+..+....+++.+++.++ . ++ +|++|+|+++++..+
T Consensus 50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~--~~-~v~~~~~Gsea~~~a 125 (429)
T 3k28_A 50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVP-S--IE-IVRMVNSGTEATMSA 125 (429)
T ss_dssp TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHST-T--CS-EEEEESSHHHHHHHH
T ss_pred CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCC-C--CC-EEEEeCChHHHHHHH
Confidence 4677899998764 4555 58999999999887643323334566778888887765 2 34 899999999999998
Q ss_pred HHHhcc--CCCeEEEcCCCcHHHHHHHH-HcCCEEEEecCCCCCCcc------------cCHHHHHHHhhcC-CCcEEEE
Q 043334 689 VLCCIL--EGGTLCFPAGSNGNYVSAAR-FLKANIVNIPTESEVGFK------------MTEKTLVTILETV-KKPWVYI 752 (903)
Q Consensus 689 l~~l~~--pGD~Vlv~~P~y~~~~~~~~-~~G~~vv~v~~~~~~~f~------------ld~~~L~~~l~~~-~~~~vil 752 (903)
+..+.. +++.|++.+|+|..+...+. ..|..+..++.....++. -|+++++++++.. ....+++
T Consensus 126 i~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 205 (429)
T 3k28_A 126 LRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVI 205 (429)
T ss_dssp HHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEE
T ss_pred HHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEE
Confidence 877754 66899999999865443322 222211111111111111 1789999888732 1236777
Q ss_pred ECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc
Q 043334 753 SGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM 831 (903)
Q Consensus 753 ~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~ 831 (903)
++|++|++|.+. +.+++++|.++|++||++||+||+|.++ ..+.. .........+ -+.||||++
T Consensus 206 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-------~~~~~~~~~~-------di~t~sK~~ 270 (429)
T 3k28_A 206 VEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYN-------CGQGYYGVTP-------DLTCLGKVI 270 (429)
T ss_dssp ECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTT-------HHHHHHTCCC-------SEEEECGGG
T ss_pred EcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-------hHHHHhCCCC-------ceehhhhhh
Confidence 778745556554 6888999999999999999999999877 44432 1122222221 235799999
Q ss_pred ccccceeeEEEeCcHHHHHHHHhC-----CCCCCCcHHHHHHHHHHHh
Q 043334 832 LTGALKFGFLVLNHPQLVDAFSSF-----PGLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 832 g~~GlRiG~lv~~~~~li~~l~~~-----~~~~~~s~~~Q~aa~~~L~ 874 (903)
+ .|+|+||++++++ +++.+... ..+++.+.++|.++.++|+
T Consensus 271 ~-~G~~iG~~~~~~~-~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~ 316 (429)
T 3k28_A 271 G-GGLPVGAYGGKAE-IMRQVAPSGPIYQAGTLSGNPLAMAAGYETLV 316 (429)
T ss_dssp G-TTSCCEEEEECHH-HHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred c-CCCCeEEEEEcHH-HHhhhccCCCccccCCCCCChHHHHHHHHHHH
Confidence 8 5999999999887 88887652 2267788999999999995
No 180
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.76 E-value=1.8e-17 Score=190.59 Aligned_cols=179 Identities=10% Similarity=0.068 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcC-CCcHHHHHHH----------HHcCCEE
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPA-GSNGNYVSAA----------RFLKANI 720 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~-P~y~~~~~~~----------~~~G~~v 720 (903)
..++++++++++.+|.+.... ++++++| ++++..++.++++|||+|+++. |.|+.+...+ +..|+++
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~-~i~~~sG-t~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~ 142 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLV-RPQIISG-THAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGY 142 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECC-BTTSCSH-HHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEE
T ss_pred hhHHHHHHHHHHHhCCCcccc-cceeeCH-HHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEE
Confidence 458899999999999875522 4456755 7899999999999999999998 9999988665 3479999
Q ss_pred EEecCCCCCCcccCHHHHHHHhhcCCCcEEEEEC-CCCCCcccCCCHHHHHHHHHHHHh--CCcEEEEecCCCCCccCCC
Q 043334 721 VNIPTESEVGFKMTEKTLVTILETVKKPWVYISG-PTINPTGLLYSNKEIENILTVCAK--YGARVVIDTAFSGLEFNYE 797 (903)
Q Consensus 721 v~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~-P~~NPTG~v~s~eel~eI~~ia~k--~~i~VI~DeaY~~l~f~~~ 797 (903)
+.+++++ ++.+|++++++++++++ ++|++++ |+ ||||.+++.+++++|+++|++ +|+++|+|++|+.+.+...
T Consensus 143 ~~v~~~~--~~~~d~e~l~~~l~~~t-k~V~i~~sp~-np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~ 218 (431)
T 3ht4_A 143 NAVPLTE--GGLVDFEAVAAAIHSNT-KMIGIQRSKG-YATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQE 218 (431)
T ss_dssp EECCBCT--TSSBCHHHHHHHCCTTE-EEEEEECSCT-TSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCC
T ss_pred EEeCCCC--CCCcCHHHHHhhcCCCC-eEEEEECCCC-CCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCC
Confidence 9999875 47799999999998766 5888884 76 999999999999999999999 9999999999987765443
Q ss_pred CCCCCchhhhhhhhccCCCCCCceEEEccCchhccc-ccceeeEEEeCcHHHHHHHHh
Q 043334 798 GWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLT-GALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 798 ~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~-~GlRiG~lv~~~~~li~~l~~ 854 (903)
+ .. . +..++++|+||.+|. .+...||++++++ +++.+..
T Consensus 219 ~---------~~----~----g~Di~~~S~sK~lgg~~~~~GG~v~~~~~-li~~l~~ 258 (431)
T 3ht4_A 219 P---------CH----V----GADLMAGSLIKNPGGGIVKTGGYIVGKEQ-YVEACAY 258 (431)
T ss_dssp G---------GG----T----TCSEEEEETTSGGGTTTCSSCEEEEECHH-HHHHHHH
T ss_pred c---------cc----c----CCeEEEcCccccCCCCCCCceEEEEecHH-HHHHHHH
Confidence 2 11 1 246899999999653 1233499999877 9888876
No 181
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.76 E-value=4.5e-18 Score=189.34 Aligned_cols=230 Identities=11% Similarity=-0.013 Sum_probs=157.4
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccC
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILE 695 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~p 695 (903)
..+.+..|++++++++.+.+++.+.+. ...+|..+..+.+++.+++++|.+. .+++ +|+++++..++.+++.+
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~----~i~~-~~g~~a~~~a~~~~~~~ 86 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDNLE--SDIYGNGAVIEDFETKIAKILGKQS----AVFF-PSGTMAQQIALRIWADR 86 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTTCB--CCBTTBSHHHHHHHHHHHHHHTCSE----EEEE-SCHHHHHHHHHHHHHHH
T ss_pred chhhcCCCccccCCCHHHHHHHHhhcc--cCcccCCHHHHHHHHHHHHHhCCCc----EEEe-CCHHHHHHHHHHHHHhc
Confidence 456677778877778888888776432 2234555566777777777777642 3666 55567888889999999
Q ss_pred CCe--EEEcCCCcHHHH---HHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCc-ccCCCHHHH
Q 043334 696 GGT--LCFPAGSNGNYV---SAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPT-GLLYSNKEI 769 (903)
Q Consensus 696 GD~--Vlv~~P~y~~~~---~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPT-G~v~s~eel 769 (903)
||. |+++.++|..+. ......|++++.++.+ ++.+|+++++++ .+++ ++|++++|+ ||| |.+++.+++
T Consensus 87 g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~-~~~~-~~v~~~~p~-n~~~G~~~~~~~l 160 (359)
T 3pj0_A 87 KENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTA---NQLLTIDDIKSL-REPV-SSVLIELPQ-REIGGQLPAFEEL 160 (359)
T ss_dssp HTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCT---TSCCCHHHHHTC-SSCC-SEEEEESSB-GGGTSBCCCHHHH
T ss_pred CCCcEEEEeccceeeehhcchHHHhcCceEEecCCc---CCCcCHHHHHhc-cCCc-eEEEEEecc-cCCCcccCCHHHH
Confidence 987 666666655442 2235679999999873 467999999988 5555 599999998 998 799999999
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 770 ENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
++|+++|+++|++||+|++|......... .+... +.. ...+++.||||+++.++. ||++++++ ++
T Consensus 161 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~~----~~~-----~~d~~~~s~sK~~~~~~g--g~~~~~~~-l~ 225 (359)
T 3pj0_A 161 EKISEYCHEQGISLHLDGARLWEITPFYQ---KSAEE----ICA-----LFDSVYVSFYKGIGGIAG--AILAGNDD-FV 225 (359)
T ss_dssp HHHHHHHHHHTCEEEEEETTCGGGHHHHT---CCHHH----HHT-----TCSEEEEESSSTTCCSSC--EEEEECHH-HH
T ss_pred HHHHHHHHHcCCEEEEECcchhcchhhhC---CCHHH----hhc-----cCCEEEEeccccCCCcce--EEEECCHH-HH
Confidence 99999999999999999998532211111 01111 111 123456799999976643 78888876 98
Q ss_pred HHHHhCCC----CCCCcHHHHHHHHHHH
Q 043334 850 DAFSSFPG----LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 850 ~~l~~~~~----~~~~s~~~Q~aa~~~L 873 (903)
+.+..... ........+.++..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l 253 (359)
T 3pj0_A 226 QEAKIWKRRYGGDLISLYPYILSADYYF 253 (359)
T ss_dssp HHHHHHHHHTTCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 88876421 2223344444444455
No 182
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.76 E-value=5.2e-18 Score=195.87 Aligned_cols=251 Identities=12% Similarity=0.035 Sum_probs=169.8
Q ss_pred HhhhhccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHH-ccCC-------CCCchHHH--HH
Q 043334 587 KSTEMIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFA-RQNM-------SESEIDVT--PS 656 (903)
Q Consensus 587 ~s~~~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~-~y~~-------~~G~~~lr--~a 656 (903)
+..++..+.++.+..+..... ...+.|+|..+++. .++.+++++.+.+. .|.. ..|....+ ++
T Consensus 22 ~~~~l~~~~~~i~~~~~~~~~-----~~~~~i~l~~~~~~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~ 94 (447)
T 3h7f_A 22 MSAPLAEVDPDIAELLAKELG-----RQRDTLEMIASENF--VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVEN 94 (447)
T ss_dssp GGCCHHHHCHHHHHHHHHHHH-----HHHHSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHH
T ss_pred hHHHHHhCCHHHHHHHHHHHH-----HHhCceeEecCCCC--CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHH
Confidence 445556666666666553211 11257888665554 48889999888774 3321 12333333 55
Q ss_pred HH-HHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH-----HHHHcCCEEEEecCCCCCC
Q 043334 657 IQ-QYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS-----AARFLKANIVNIPTESEVG 730 (903)
Q Consensus 657 la-~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~-----~~~~~G~~vv~v~~~~~~~ 730 (903)
++ +++++.+|.+.. .++ ++|+++++..++.++++|||+|++++|+|..+.. .....+..+++++++. ++
T Consensus 95 ~a~~~la~~~g~~~~---~v~-~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~ 169 (447)
T 3h7f_A 95 LARDRAKALFGAEFA---NVQ-PHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-AT 169 (447)
T ss_dssp HHHHHHHHHHTCSEE---ECC-CSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TT
T ss_pred HHHHHHHHHcCCCce---EEE-eCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-cc
Confidence 66 889998887643 333 4555678888899999999999999999876211 1222456778888765 35
Q ss_pred cccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCC-CCccCCCCCCCCchhhhhh
Q 043334 731 FKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFS-GLEFNYEGWGGWDLEGCLS 809 (903)
Q Consensus 731 f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~-~l~f~~~~~s~~s~~~~~~ 809 (903)
+.+|++++++.++..+.+++++++|+ ||++. ++++|.++|+++|++||+||+|. ++.+.+... ..+
T Consensus 170 ~~~d~~~l~~~i~~~~~~~i~~~~~~-~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~------~~~- 236 (447)
T 3h7f_A 170 HLIDMDAVRATALEFRPKVIIAGWSA-YPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHP------SPV- 236 (447)
T ss_dssp CSCCHHHHHHHHHHHCCSEEEEECSS-CCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC------CST-
T ss_pred CCcCHHHHHHHHHhcCCeEEEEcCCC-CCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCC------CCC-
Confidence 77999999999864333588888998 99987 58999999999999999999973 344444321 001
Q ss_pred hhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC---CCCCcHHHHHHHHHHH
Q 043334 810 KLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG---LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 810 ~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~---~~~~s~~~Q~aa~~~L 873 (903)
+ ...+++.|+||+++ |+|.||++++++ +++.+..... ..++....+.++..++
T Consensus 237 --~------~~di~~~s~sK~l~--G~~gG~i~~~~~-~~~~l~~~~~~~~~~~~~~~~~~a~~~a~ 292 (447)
T 3h7f_A 237 --P------HADVVSTTVHKTLG--GGRSGLIVGKQQ-YAKAINSAVFPGQQGGPLMHVIAGKAVAL 292 (447)
T ss_dssp --T------TCSEEEEESSGGGC--CCSCEEEEECGG-GHHHHHHHHTTTTCSSCCHHHHHHHHHHH
T ss_pred --C------CCcEEEecCCcCCC--CCCeEEEEECHH-HHHHHhhhcCCcccCCccHHHHHHHHHHH
Confidence 1 13478999999874 899999999987 8888776422 3334444455555555
No 183
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.75 E-value=1.3e-17 Score=193.26 Aligned_cols=265 Identities=10% Similarity=0.065 Sum_probs=182.7
Q ss_pred CCC--CeEEccCC--CCCCC-CcHHHHHHHHHHHHccCC---CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 613 PNS--GLIHMDVD--QSFLP-IPSLVKAAIFESFARQNM---SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 613 ~~~--~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~---~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
.|. ..||+..| .+.++ .++.+.+++.+.+.+... ..+..+...++++.+++.++...+ +|++|+|++++
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~---~v~~~~sGseA 147 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLD---TVFFSDSGSVS 147 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEE---EEEEESSHHHH
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcC---EEEEeCcHHHH
Confidence 667 78999766 45555 688899999988876422 234567788999999998876554 89999999999
Q ss_pred HHHHHHHhcc-------CCC-eEEEcCCCcHHHHHHHHHcC--------------CEEEEecCCCCCCcccCHHHHHHHh
Q 043334 685 FNKLVLCCIL-------EGG-TLCFPAGSNGNYVSAARFLK--------------ANIVNIPTESEVGFKMTEKTLVTIL 742 (903)
Q Consensus 685 l~~ll~~l~~-------pGD-~Vlv~~P~y~~~~~~~~~~G--------------~~vv~v~~~~~~~f~ld~~~L~~~l 742 (903)
+..++..+.. +|+ .|++.+++|..+...+...+ ..+..++.........|+++|++++
T Consensus 148 ~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l 227 (457)
T 3tfu_A 148 VEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQL 227 (457)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHH
Confidence 9999988875 665 89999999866544443331 1233334322111124789999988
Q ss_pred hc--CCCcEEEEECC-CCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCC
Q 043334 743 ET--VKKPWVYISGP-TINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSS 818 (903)
Q Consensus 743 ~~--~~~~~vil~~P-~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~ 818 (903)
++ .+ ..++++.| .|||+|.++ +.+.+++|.++|+++|+++|+||+|.++.+.+... . .......+
T Consensus 228 ~~~~~~-~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~---a----~~~~~~~p--- 296 (457)
T 3tfu_A 228 AQHAGE-LAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF---A----ADHAGVSP--- 296 (457)
T ss_dssp HHHGGG-EEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS---T----HHHHTCCC---
T ss_pred HhCCCC-EEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh---H----hHhcCCCc---
Confidence 73 22 24556666 259999877 78889999999999999999999998765555431 1 22222222
Q ss_pred CceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHh------CC-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHH
Q 043334 819 FNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSS------FP-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEH 890 (903)
Q Consensus 819 ~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~------~~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~ 890 (903)
.++ ||||.++ .| +|+||++++++ +++.+.. .. .+++.+.+.|.++.++|+.-.. +.+.+.+.++
T Consensus 297 -dii---t~sK~l~-gG~~~lG~v~~~~~-i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~--~~~~~~~~~~ 368 (457)
T 3tfu_A 297 -DIM---CVGKALT-GGYLSLAATLCTAD-VAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG--QDWRTRITEL 368 (457)
T ss_dssp -SEE---EECGGGG-TTSSCCEEEEEEHH-HHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT--SCHHHHHHHH
T ss_pred -eEE---EEChhhh-CCCcceEEEEEcHH-HHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh--hHHHHHHHHH
Confidence 223 9999886 35 79999999987 9998862 11 3677889999999998852111 2344555555
Q ss_pred HHHHHHHHH
Q 043334 891 IRNLESRSK 899 (903)
Q Consensus 891 r~~y~~Rr~ 899 (903)
.+.++++.+
T Consensus 369 ~~~l~~~L~ 377 (457)
T 3tfu_A 369 AAGLTAGLD 377 (457)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHHHH
Confidence 555555443
No 184
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.75 E-value=7.9e-17 Score=182.50 Aligned_cols=191 Identities=10% Similarity=0.077 Sum_probs=145.8
Q ss_pred cHHHHHHHHHHHHc-cCCCCC--chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCC
Q 043334 630 PSLVKAAIFESFAR-QNMSES--EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGS 705 (903)
Q Consensus 630 p~~v~~al~~al~~-y~~~~G--~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~ 705 (903)
++.+.+++.+.+.. |....| ..++++++++++ |. + ++++|+|+++++..++.++ +++||+|+++.|+
T Consensus 11 ~~~v~~a~~~~~~~~~~~~~g~~~~~l~~~la~~~----~~--~---~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~ 81 (394)
T 1o69_A 11 GGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYS----KS--E---NALALNSATAALHLALRVAGVKQDDIVLASSFT 81 (394)
T ss_dssp -CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHH----CC--S---EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred CHHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHh----CC--C---cEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence 34577777777754 333346 555666666554 54 2 7999999999999999999 9999999999999
Q ss_pred cHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhc---CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcE
Q 043334 706 NGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILET---VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGAR 782 (903)
Q Consensus 706 y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~---~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~ 782 (903)
|+.+...++..|++++.++++ ++|.+|++.+++.+++ ++ ++|+++ ||||...+ +++|.++|+++|++
T Consensus 82 ~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~-~~v~~~----~~~G~~~~---l~~i~~l~~~~~~~ 151 (394)
T 1o69_A 82 FIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKP-KALILT----HLYGNAAK---MDEIVEICKENDIV 151 (394)
T ss_dssp CGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCC-CEEEEE----CGGGCCCC---HHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCc-eEEEEE----CCCCChhh---HHHHHHHHHHcCCE
Confidence 999999999999999999997 4678999999999886 45 588887 47897655 88899999999999
Q ss_pred EEEecCCC-CCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC
Q 043334 783 VVIDTAFS-GLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 783 VI~DeaY~-~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~ 856 (903)
||+|++|+ ++.|.+... . .. ..+.+.||||..+++|.|+||++++++++++.+....
T Consensus 152 li~Dea~~~g~~~~~~~~---------~---~~-----~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~ 209 (394)
T 1o69_A 152 LIEDAAEALGSFYKNKAL---------G---TF-----GEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYS 209 (394)
T ss_dssp EEEECTTCTTCEETTEET---------T---SS-----SSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHT
T ss_pred EEEECcCcccceeCCccc---------c---cc-----cCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHH
Confidence 99999998 565644321 0 11 1245566654445568899999997544888887653
No 185
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.4e-17 Score=194.53 Aligned_cols=207 Identities=10% Similarity=0.090 Sum_probs=160.1
Q ss_pred CCcHHHHHHHHHHHHccC--------CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc-----
Q 043334 628 PIPSLVKAAIFESFARQN--------MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL----- 694 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~--------~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~----- 694 (903)
..++.+.+.+.+++..+. ...|..++++.+++++++.+|.+..++ ++++++|+++++..++.++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~-~~~~~~ggt~a~~~a~~a~~~~~~~~ 153 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTG-CGTTTSGGTESLLLACLSAKMYALHH 153 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTC-CEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCC-eEEEcCcHHHHHHHHHHHHHHHHHhc
Confidence 345777777777766521 123456788899999999999985444 899999999999999998876
Q ss_pred CC---CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHH
Q 043334 695 EG---GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIEN 771 (903)
Q Consensus 695 pG---D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~e 771 (903)
+| |.|+++.|+|+.+...++..|++++.+|+++ +++.+|+++|++++++++ ++|++++|+ ||||.+.+ +++
T Consensus 154 ~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~-~~v~~~~p~-nptG~~~~---l~~ 227 (497)
T 3mc6_A 154 RGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNT-VLLVGSAPN-FPHGIADD---IEG 227 (497)
T ss_dssp SCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSE-EEEEEETTC-TTTCCCCS---CTT
T ss_pred CCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCC-EEEEEECCC-CCCCcCCC---HHH
Confidence 56 8999999999999999999999999999975 467899999999998766 599999998 99999988 778
Q ss_pred HHHHHHhCCcEEEEecCCCCCcc--CCC-CCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHH
Q 043334 772 ILTVCAKYGARVVIDTAFSGLEF--NYE-GWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQL 848 (903)
Q Consensus 772 I~~ia~k~~i~VI~DeaY~~l~f--~~~-~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~l 848 (903)
|.++|+++|+++|+|++|+.+.. ... ..... ++ +. ... .+..+++.|++|.+ .+|.++||++++++ .
T Consensus 228 i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~--~~-~~-~~~----~g~d~~~~s~~K~l-~~~~~~g~~~~~~~-~ 297 (497)
T 3mc6_A 228 LGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNL--PL-LD-FRV----PGVTSISCDTHKYG-FAPKGSSVIMYRNS-D 297 (497)
T ss_dssp TTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSC--CC-CS-TTS----TTCCEEEEETTTTT-CCCSSCEEEECSSH-H
T ss_pred HHHHHHHhCCEEEEECcchhhhhhhhhhhcccCC--cc-cc-ccC----CCCcEEEECchhhc-CCCCCceeEEecCH-H
Confidence 99999999999999999974322 111 00000 00 01 001 13568889999975 47889999999987 4
Q ss_pred HHH
Q 043334 849 VDA 851 (903)
Q Consensus 849 i~~ 851 (903)
+..
T Consensus 298 ~~~ 300 (497)
T 3mc6_A 298 LRM 300 (497)
T ss_dssp HHT
T ss_pred HHh
Confidence 443
No 186
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.75 E-value=3.9e-17 Score=170.94 Aligned_cols=188 Identities=14% Similarity=0.134 Sum_probs=130.7
Q ss_pred cccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCc-cCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccc
Q 043334 2 MVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCG-NGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALD 80 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCG-tG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~ 80 (903)
.+.|++|+|+..+..++ +.... .++.+|||+||| +|.+++.+++.. +.+|+|+|+|+.+++.|++|+..+++
T Consensus 32 ~~~~~~~~p~~~~~~l~--~~~~~---~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~- 104 (230)
T 3evz_A 32 EYHPKGLVTTPISRYIF--LKTFL---RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS- 104 (230)
T ss_dssp CCCTTSCCCCHHHHHHH--HHTTC---CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-
T ss_pred ecCCCeEeCCCchhhhH--hHhhc---CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-
Confidence 36789999986554332 22222 267899999999 999999999986 78999999999999999999988875
Q ss_pred cCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccc
Q 043334 81 EKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFV 160 (903)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v 160 (903)
+++++++|+........++||+|++||||+..+...... +..+ +.
T Consensus 105 ----------------~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~----------------~~~~---~~ 149 (230)
T 3evz_A 105 ----------------NVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLT----------------EREA---IG 149 (230)
T ss_dssp ----------------CCEEEECSSCSSTTTCCSCEEEEEECCCCC----------------------------------
T ss_pred ----------------CcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccC----------------hhhh---hc
Confidence 699999996443222234899999999999765422111 0111 22
Q ss_pred cccccHHHHHHHHHHHhhcccCCcEEEEEeCCC-CcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeee
Q 043334 161 EDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGR-PGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIE 239 (903)
Q Consensus 161 ~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~-~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e 239 (903)
.+..+.+.+..+++++.++|||||++++..+.. .....+.+.+++.||....+.. .....+..++.+.
T Consensus 150 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-----------~~g~~~~~~l~f~ 218 (230)
T 3evz_A 150 GGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKF-----------KVGTRWRHSLIFF 218 (230)
T ss_dssp CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEE-----------CCCC-CEEEEEEE
T ss_pred cCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEe-----------cCCCeEEEEEEEe
Confidence 245566777899999999999999999977654 3445667889999997766521 1334455566666
Q ss_pred ccC
Q 043334 240 KNS 242 (903)
Q Consensus 240 ~~~ 242 (903)
+..
T Consensus 219 ~~~ 221 (230)
T 3evz_A 219 KGI 221 (230)
T ss_dssp CCC
T ss_pred ccc
Confidence 543
No 187
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.75 E-value=2.9e-17 Score=191.37 Aligned_cols=264 Identities=8% Similarity=0.036 Sum_probs=183.8
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccC--CC-CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQN--MS-ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLF 685 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~--~~-~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al 685 (903)
..|...+|+..| .+.++ .++.+.+++.+.+.+.. .. .+..+.+.++++++++.++...+ +|++++|+++++
T Consensus 51 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~---~v~~~~sGseA~ 127 (476)
T 3i5t_A 51 EDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLN---RIFFTTGGSTAV 127 (476)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCC---EEEEESSHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcC---EEEEeCchHHHH
Confidence 467789999866 55555 58899999999887632 22 46778899999999998765544 899999999999
Q ss_pred HHHHHHhcc--------CCCeEEEcCCCcHHHHHHHHHcCCE-------------EEEec--CCCCCCcccC--------
Q 043334 686 NKLVLCCIL--------EGGTLCFPAGSNGNYVSAARFLKAN-------------IVNIP--TESEVGFKMT-------- 734 (903)
Q Consensus 686 ~~ll~~l~~--------pGD~Vlv~~P~y~~~~~~~~~~G~~-------------vv~v~--~~~~~~f~ld-------- 734 (903)
..++..+.. .++.|++.+|+|.++...+...+.. +..++ ....+ +..|
T Consensus 128 ~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~ 206 (476)
T 3i5t_A 128 DSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLDDL 206 (476)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHHHH
Confidence 999988864 2579999999998877666544332 22222 21111 2223
Q ss_pred HHHHHHHhhc---CCCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhh-
Q 043334 735 EKTLVTILET---VKKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLS- 809 (903)
Q Consensus 735 ~~~L~~~l~~---~~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~- 809 (903)
+++|++.++. .+. +++++.|.+|++|. +++.+++++|.++|++||+++|+||+|.++...|... . ..
T Consensus 207 ~~~le~~i~~~~~~~~-aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~---~----~~~ 278 (476)
T 3i5t_A 207 VQEFEDRIESLGPDTI-AAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF---A----SEK 278 (476)
T ss_dssp HHHHHHHHHHHCGGGE-EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC---H----HHH
T ss_pred HHHHHHHHHhcCCCCE-EEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce---e----eec
Confidence 7788888863 232 45555565588885 8899999999999999999999999998876555431 1 12
Q ss_pred hhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhC--------C-CCCCCcHHHHHHHHHHHhccccc
Q 043334 810 KLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF--------P-GLSKPHSTVRYAIKKLLGLRERK 879 (903)
Q Consensus 810 ~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~--------~-~~~~~s~~~Q~aa~~~L~~~~~~ 879 (903)
...-.+ .+ -+|||.++ .| +|+|+++++++ +++.+... . .+++.++++|.++.++|+.-..
T Consensus 279 ~~~v~p----di---~t~sK~l~-~G~~plg~v~~~~~-i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~- 348 (476)
T 3i5t_A 279 VFGVVP----DI---ITFAKGVT-SGYVPLGGLAISEA-VLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER- 348 (476)
T ss_dssp TTCCCC----SE---EEECGGGG-TTSSCCEEEEECHH-HHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred ccCCCc----ch---hhhhhhhc-CCCcCeEEEEECHH-HHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh-
Confidence 222222 22 26899998 48 99999999887 99988752 2 3678889999999999952111
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 043334 880 ARDLMNAVAEHIRNLESRS 898 (903)
Q Consensus 880 ~~~~~~~l~~~r~~y~~Rr 898 (903)
+.+.+.+.+..+.++++.
T Consensus 349 -~~~~~~~~~~~~~l~~~L 366 (476)
T 3i5t_A 349 -EGIVDQAREMADYFAAAL 366 (476)
T ss_dssp -TTHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHH
Confidence 223344444444444433
No 188
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.75 E-value=8.8e-17 Score=181.63 Aligned_cols=203 Identities=11% Similarity=-0.039 Sum_probs=153.1
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHccCCC-CCchHHHHHHHHHH-HhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCC
Q 043334 620 MDVDQSFLPIPSLVKAAIFESFARQNMS-ESEIDVTPSIQQYI-KSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEG 696 (903)
Q Consensus 620 Ls~g~p~~~~p~~v~~al~~al~~y~~~-~G~~~lr~ala~~l-~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pG 696 (903)
...++|++++++.+.+++.+.+.+.... +| +..+.+++.+ ++++|. . + ++++++|+++++..++.++ ++||
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~~~~~~--~~~~~l~~~~~a~~~g~-~--~-~~v~~~sgt~al~~al~~l~~~~G 78 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHIYTNYG--PINQRFEQTIMSGFFQN-R--G-AVTTVANATLGLMAAIQLKKRKKG 78 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTCCSSSC--HHHHHHHHHHHHHTSTT-C--S-EEEEESCHHHHHHHHHHHHSCTTC
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCCcccCC--HHHHHHHHHHHHHHhCC-C--C-eEEEeCCHHHHHHHHHHHcCCCCc
Confidence 5567999999999999999988764333 23 3345666666 777772 1 2 5788888888998888887 8999
Q ss_pred CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHh-hcC--CCcEEEEECCCCCCcccCCCHHHHHHHH
Q 043334 697 GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTIL-ETV--KKPWVYISGPTINPTGLLYSNKEIENIL 773 (903)
Q Consensus 697 D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l-~~~--~~~~vil~~P~~NPTG~v~s~eel~eI~ 773 (903)
|+|+++.|+|+.+...++..|++++.+++++ ++|.+|++++++++ +++ + ++|+ |+ ||||.+.+ +++|.
T Consensus 79 d~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~t-k~v~---~~-~~~G~~~~---~~~i~ 149 (377)
T 3ju7_A 79 KYALMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEV-AIVV---PY-ATFGSWMN---LEEYE 149 (377)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGE-EEEC---CB-CGGGBCCC---CHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCc-eEEE---EE-CCCCCccC---HHHHH
Confidence 9999999999999999999999999999975 46889999999988 554 4 3444 77 99999987 67788
Q ss_pred HHHHhCCcEEEEecCCCCCc-cCCCCCCCCchhhhhhhhccCCCCCCceEEEccC--chhcccccceeeEEEeCcHHHHH
Q 043334 774 TVCAKYGARVVIDTAFSGLE-FNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGL--SLKMLTGALKFGFLVLNHPQLVD 850 (903)
Q Consensus 774 ~ia~k~~i~VI~DeaY~~l~-f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~--SK~~g~~GlRiG~lv~~~~~li~ 850 (903)
++|+ +|++||+|++|+... +.+.. .. ... ..+.+.|| +|.++. | +.|+++++++++++
T Consensus 150 ~la~-~~~~vi~D~a~a~g~~~~~~~---------~g--~~~-----~d~~~~S~~~~K~l~~-g-~gG~~~~~~~~l~~ 210 (377)
T 3ju7_A 150 ELEK-KGVPVVVDAAPGFGLMNGGMH---------YG--QDF-----SGMIIYSFHATKPFGI-G-EGGLIYSKNEEDIQ 210 (377)
T ss_dssp HHHH-TTCCBEEECTTCTTCEETTEE---------TT--TTC-----SSEEEEECBTTSSSCC-B-SCEEEEESCHHHHH
T ss_pred HHHh-cCCEEEEECCCccCCeECCEe---------cc--CCC-----CcEEEEECCCCCcCCC-C-CcEEEEECCHHHHH
Confidence 8889 999999999996432 22211 10 001 13455554 698874 5 78999998877888
Q ss_pred HHHhCC
Q 043334 851 AFSSFP 856 (903)
Q Consensus 851 ~l~~~~ 856 (903)
.+..+.
T Consensus 211 ~~~~~~ 216 (377)
T 3ju7_A 211 RIKRMG 216 (377)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 777643
No 189
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.75 E-value=1e-16 Score=182.93 Aligned_cols=184 Identities=13% Similarity=0.102 Sum_probs=141.4
Q ss_pred CCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCC
Q 043334 626 FLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGS 705 (903)
Q Consensus 626 ~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~ 705 (903)
+++.++.+.+.+. .-..|.+.....+..+.+++.+++.+|.+ ++++++|+++++..++.+++++||+|+++.|+
T Consensus 31 ~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~g~~-----~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~ 104 (412)
T 2cb1_A 31 GFKTLEEGQERFA-TGEGYVYARQKDPTAKALEERLKALEGAL-----EAVVLASGQAATFAALLALLRPGDEVVAAKGL 104 (412)
T ss_dssp CCSSHHHHHHHHH-HCCSCSBTTTCCHHHHHHHHHHHHHHTCS-----EEEEESSHHHHHHHHHHTTCCTTCEEEEETTC
T ss_pred ecCChHHHHHHhc-cccCcCcCCCCChHHHHHHHHHHHHhCCC-----cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3556666666553 11112222223355777888888887753 69999999999999999999999999999999
Q ss_pred cHHHHHHH----HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCc
Q 043334 706 NGNYVSAA----RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGA 781 (903)
Q Consensus 706 y~~~~~~~----~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i 781 (903)
|..+...+ +..|++++.++. |++++++++++++ ++|++++|+ ||||.+++ +++|.++|+++|+
T Consensus 105 ~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~-~~v~~~~~~-n~~G~~~~---l~~i~~l~~~~~~ 171 (412)
T 2cb1_A 105 FGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKT-RAVFVETVA-NPALLVPD---LEALATLAEEAGV 171 (412)
T ss_dssp CHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHHHHTC
T ss_pred chhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCC-eEEEEeCCC-CCCccccc---HHHHHHHHHHcCC
Confidence 98766553 457999999975 3889999998766 589999998 99999997 8899999999999
Q ss_pred EEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCc
Q 043334 782 RVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNH 845 (903)
Q Consensus 782 ~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~ 845 (903)
++|+|++|+...+... + .. . +.++++.|+||.++.||+|+||+++.+
T Consensus 172 ~li~D~~~~~~~~~~~--------~-~~----~----~~di~~~S~~K~~~~~~~~~G~~~~~~ 218 (412)
T 2cb1_A 172 ALVVDNTFGAAGALCR--------P-LA----W----GAHVVVESLTKWASGHGSVLGGAVLSR 218 (412)
T ss_dssp EEEEECGGGTTTTSCC--------G-GG----G----TCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred EEEEECCCccccccCC--------c-cc----c----CCeEEEECCcccccCCCCcEEEEEEec
Confidence 9999999965422111 1 11 1 368999999999999999999988755
No 190
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.75 E-value=4.3e-17 Score=188.34 Aligned_cols=198 Identities=13% Similarity=0.030 Sum_probs=154.3
Q ss_pred CCcHHHHHHHHHHHHcc----CCCCCchHHHHHHHHHHHhhcCCCCCC--CCcEEecCchHHHHHHHHHHhcc-------
Q 043334 628 PIPSLVKAAIFESFARQ----NMSESEIDVTPSIQQYIKSNFGFPIDI--NAEFIYADCSQSLFNKLVLCCIL------- 694 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y----~~~~G~~~lr~ala~~l~~~~G~~~~p--e~~I~vt~Gs~~al~~ll~~l~~------- 694 (903)
++++.+.+++.+++... ....+..++.+++++++++.+|.+.+. +..+++|+|+++++..++.++++
T Consensus 53 ~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~ 132 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME 132 (452)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35567888887776542 223345677889999999999987652 12499999999999998888764
Q ss_pred -CC-----CeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHH
Q 043334 695 -EG-----GTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKE 768 (903)
Q Consensus 695 -pG-----D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ee 768 (903)
+| +.|++++ +|..+...++..|++++.+|+++ ++|.+|+++|++++++++ ++|++++|+ ||||.+.+
T Consensus 133 ~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t-~~v~~~~~~-n~tG~~~~--- 205 (452)
T 2dgk_A 133 AAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENT-IGVVPTFGV-TYTGNYEF--- 205 (452)
T ss_dssp HTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTE-EEEECBBSC-TTTCBBCC---
T ss_pred hcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCC-EEEEEEcCC-cCCcccCC---
Confidence 56 5999999 99999999999999999999874 468899999999998776 589999998 99999977
Q ss_pred HHHHHHHHHhC------CcEEEEecCCCCCcc---CCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceee
Q 043334 769 IENILTVCAKY------GARVVIDTAFSGLEF---NYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFG 839 (903)
Q Consensus 769 l~eI~~ia~k~------~i~VI~DeaY~~l~f---~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG 839 (903)
+++|.++|+++ |+++++|++|+.+.. .+... +. +. .. +-.++..|++| |+++|+++|
T Consensus 206 l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~----~~----~~---~~d~~~~~~hK-~~~~~~~~G 271 (452)
T 2dgk_A 206 PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV--WD----FR----LP---RVKSISASGHK-FGLAPLGCG 271 (452)
T ss_dssp HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC--CS----TT----ST---TEEEEEEETTT-TTCCCSSCE
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch--hh----cC----CC---CCcEEEECccc-ccCCCCCeE
Confidence 77888888885 999999999976542 22210 00 11 11 24557788899 667999999
Q ss_pred EEEeCcH
Q 043334 840 FLVLNHP 846 (903)
Q Consensus 840 ~lv~~~~ 846 (903)
|+++.++
T Consensus 272 ~~~~~~~ 278 (452)
T 2dgk_A 272 WVIWRDE 278 (452)
T ss_dssp EEEESSG
T ss_pred EEEEcCH
Confidence 9999765
No 191
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.74 E-value=6.5e-17 Score=188.16 Aligned_cols=244 Identities=9% Similarity=0.070 Sum_probs=175.6
Q ss_pred CCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccC----CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 612 TPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQN----MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 612 ~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~----~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
..|...||+..| .+.++ .++.+.+++.+.+.+.. ...+..+.+.++++.+++.++...+ +|++++|++++
T Consensus 52 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~---~v~~~~sGseA 128 (472)
T 3hmu_A 52 SEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLN---HVFFAGGGSEA 128 (472)
T ss_dssp TTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEE---EEEEESSHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCC---EEEEeCCHHHH
Confidence 467788999866 55555 57899999999887643 2234567888999999998765444 89999999999
Q ss_pred HHHHHHHhcc--------CCCeEEEcCCCcHHHHHHHHHcCC------------EEEEecCCC--C-CCcccC-------
Q 043334 685 FNKLVLCCIL--------EGGTLCFPAGSNGNYVSAARFLKA------------NIVNIPTES--E-VGFKMT------- 734 (903)
Q Consensus 685 l~~ll~~l~~--------pGD~Vlv~~P~y~~~~~~~~~~G~------------~vv~v~~~~--~-~~f~ld------- 734 (903)
+..++..+.. +++.|++.+|+|..+...+...+. .+..++... . +.+ .|
T Consensus 129 ~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~ 207 (472)
T 3hmu_A 129 NDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLA 207 (472)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHH
Confidence 9999988875 467999999999887665554433 244454321 0 111 23
Q ss_pred -HHHHHHHhhcC--CCcEEEEECCCCCCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhh
Q 043334 735 -EKTLVTILETV--KKPWVYISGPTINPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSK 810 (903)
Q Consensus 735 -~~~L~~~l~~~--~~~~vil~~P~~NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~ 810 (903)
++.|++.++.. ...+++++.|.+|++|.+. +.+.+++|.++|+++|+++|+||+|.++...|... . ...
T Consensus 208 ~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~---a----~~~ 280 (472)
T 3hmu_A 208 RARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF---G----TQT 280 (472)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC---H----HHH
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc---h----hHH
Confidence 78888887631 1236677777757777655 88999999999999999999999998765555321 1 222
Q ss_pred hccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhC--C--CCCCCcHHHHHHHHHHHh
Q 043334 811 LYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSF--P--GLSKPHSTVRYAIKKLLG 874 (903)
Q Consensus 811 l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~--~--~~~~~s~~~Q~aa~~~L~ 874 (903)
..-.+ .+ .+|||+++..|+|+||++++++ +++.+... . .+++.++++|.++.++|+
T Consensus 281 ~~v~p----di---~t~sK~l~gg~~plG~v~~~~~-i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~ 340 (472)
T 3hmu_A 281 MGIRP----HI---MTIAKGLSSGYAPIGGSIVCDE-VAHVIGKDEFNHGYTYSGHPVAAAVALENLR 340 (472)
T ss_dssp HTCCC----SE---EEECGGGTTTSSCCEEEEEEHH-HHHHHTTSCBCCCCTTTTCHHHHHHHHHHHH
T ss_pred hCCCC----ce---eeechhhhcCCcceEEEEECHH-HHHhcccCCccccCCCCCCHHHHHHHHHHHH
Confidence 22222 22 2689999865699999999887 99998321 1 267788999999999995
No 192
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.74 E-value=2.8e-17 Score=189.98 Aligned_cols=221 Identities=12% Similarity=0.090 Sum_probs=149.1
Q ss_pred CCCCeEEccCCCC------CCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 613 PNSGLIHMDVDQS------FLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 613 ~~~~~IdLs~g~p------~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
.+.++++++.|++ +.++ +.+.+++.+.+......++..+....+++.+++++|. + +|++|+|+++++.
T Consensus 32 ~g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~--~---~v~~t~ggt~A~~ 105 (467)
T 1ax4_A 32 AGYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFNY--D---YIIPAHQGRGAEN 105 (467)
T ss_dssp TTSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHHHHHCC--C---EEEEESSHHHHHH
T ss_pred cCcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhcccccccCccHHHHHHHHHHHcCC--C---cEEEcCCcHHHHH
Confidence 3444555555543 2222 4555666665543211222222233344444444554 2 7999999999999
Q ss_pred HHHHHhcc----CCCe---EEEcCCCcHHHHHHHHHcCCEEEEecCCCC--------CCcccCHHHHHHHhhc----CCC
Q 043334 687 KLVLCCIL----EGGT---LCFPAGSNGNYVSAARFLKANIVNIPTESE--------VGFKMTEKTLVTILET----VKK 747 (903)
Q Consensus 687 ~ll~~l~~----pGD~---Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~--------~~f~ld~~~L~~~l~~----~~~ 747 (903)
.++.++++ +||. |+++.+.|..+...+...|++++.+++... .++.+|+++|++++++ ++
T Consensus 106 ~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~- 184 (467)
T 1ax4_A 106 ILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNI- 184 (467)
T ss_dssp HHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGE-
T ss_pred HHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCe-
Confidence 99999998 9998 999988889989999999999998765321 1346899999999975 34
Q ss_pred cEEEEECCCCCCc-ccCCCHHHHHHHHHHHHhCCcEEEEecCCCC--C--------ccCCCCCCCCchhhhhhhhccCCC
Q 043334 748 PWVYISGPTINPT-GLLYSNKEIENILTVCAKYGARVVIDTAFSG--L--------EFNYEGWGGWDLEGCLSKLYSSTN 816 (903)
Q Consensus 748 ~~vil~~P~~NPT-G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~--l--------~f~~~~~s~~s~~~~~~~l~~~~~ 816 (903)
++|++++|+ ||| |.+++.+++++|.++|++||++||+|+++.. . .+.+. ++......+...
T Consensus 185 ~~vi~~~~~-np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-- 256 (467)
T 1ax4_A 185 VAIVSTVTC-NSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA-----TIKEVIFDMYKY-- 256 (467)
T ss_dssp EEEEEESSB-TTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC-----CHHHHHHHHGGG--
T ss_pred eEEEEeccc-cCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC-----chhhhhhhhccc--
Confidence 589999997 999 8999999999999999999999999998632 1 12221 111111000011
Q ss_pred CCCceEEEccCchhcccc-cceeeEEEeCcH-HHHHHHHh
Q 043334 817 SSFNVSLLGGLSLKMLTG-ALKFGFLVLNHP-QLVDAFSS 854 (903)
Q Consensus 817 ~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~-~li~~l~~ 854 (903)
..+++.|+||.+|++ | ||++++++ ++++.+..
T Consensus 257 ---~d~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~~~~ 290 (467)
T 1ax4_A 257 ---ADALTMSAKKDPLLNIG---GLVAIRDNEEIFTLARQ 290 (467)
T ss_dssp ---CSEEEEETTSTTCCSSC---EEEEESSCHHHHHHHHH
T ss_pred ---cceEEEeccccCCCCcc---eEEEeCCHHHHHHHHHh
Confidence 124668999999876 4 67777733 38777654
No 193
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.73 E-value=4.5e-17 Score=185.89 Aligned_cols=172 Identities=9% Similarity=0.087 Sum_probs=139.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEe--cCchHHHHHHHHHHhccCCCeEEEcC-CCcHHHHHH----------HHHcCCEE
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIY--ADCSQSLFNKLVLCCILEGGTLCFPA-GSNGNYVSA----------ARFLKANI 720 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~v--t~Gs~~al~~ll~~l~~pGD~Vlv~~-P~y~~~~~~----------~~~~G~~v 720 (903)
++++++.+++.+|.+. .+++ ++|+++++..++.++++|||+|++++ |.|..+... ++..|+++
T Consensus 61 ~~~Le~~lA~l~g~e~----alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~ 136 (409)
T 3jzl_A 61 RDTLERVYATVFKTEA----ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGY 136 (409)
T ss_dssp HHHHHHHHHHHHTCSE----EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEE
T ss_pred HHHHHHHHHHHhCCCc----EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEE
Confidence 6778888888888643 2443 77778899999999999999999998 999998854 46679999
Q ss_pred EEecCCCCCCcccCHHHHHHHhhcCCCcEEEEEC----CCCCCcccCCCHHHHHHHHHHHHh--CCcEEEEecCCCCCcc
Q 043334 721 VNIPTESEVGFKMTEKTLVTILETVKKPWVYISG----PTINPTGLLYSNKEIENILTVCAK--YGARVVIDTAFSGLEF 794 (903)
Q Consensus 721 v~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~----P~~NPTG~v~s~eel~eI~~ia~k--~~i~VI~DeaY~~l~f 794 (903)
+.+++++ ++.+|++++++++++++ ++|++++ |+ ||||.+ .++++|+++|++ +|+++|+|++|+.+.+
T Consensus 137 ~~v~~~~--~g~~d~e~l~~ai~~~t-klV~i~~s~g~p~-nptg~v---~~l~~I~~la~~~~~~~~livD~a~~~~~~ 209 (409)
T 3jzl_A 137 SSVPLLE--NGDVDFPRIAKKMTPKT-KMIGIQRSRGYAD-RPSFTI---EKIKEMIVFVKNINPEVIVFVDNCYGEFVE 209 (409)
T ss_dssp EECCCCT--TSCCCHHHHHHHCCTTE-EEEEEECSCTTSS-SCCCCH---HHHHHHHHHHHHHCTTCEEEEECTTCTTTS
T ss_pred EEeCCCC--CCCcCHHHHHHhccCCC-eEEEEECCCCCCC-CCcCcc---ccHHHHHHHHHhhCCCCEEEEeCCcccccc
Confidence 9999864 46799999999998776 5999999 98 999877 569999999999 9999999999976554
Q ss_pred CCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHh
Q 043334 795 NYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 795 ~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~ 854 (903)
...+ .. . +..++++|+||.+|.+| .+.||++++++ +++.+..
T Consensus 210 ~~~p---------~~----~----g~Div~~S~sK~lgg~~~~~GG~v~~~~~-li~~l~~ 252 (409)
T 3jzl_A 210 YQEP---------PE----V----GADIIAGSLIKNPGGGLAKTGGYIAGKEA-LVDLCGY 252 (409)
T ss_dssp SCCS---------GG----G----TCSEEEEETTSGGGTTTCSSCEEEEECHH-HHHHHHH
T ss_pred cCCc---------cc----c----CCeEEEECccccCCccCCceEEEEEeCHH-HHHHHHH
Confidence 3322 11 1 25789999999998666 34689999876 9998876
No 194
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.73 E-value=1.7e-17 Score=188.42 Aligned_cols=249 Identities=12% Similarity=-0.013 Sum_probs=159.0
Q ss_pred CeEEccCCCCCCCCcHHHHHHHHHHHHc-cC----------CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 616 GLIHMDVDQSFLPIPSLVKAAIFESFAR-QN----------MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 616 ~~IdLs~g~p~~~~p~~v~~al~~al~~-y~----------~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
+.+.+..+++. .++.+.+++.+.+.+ +. .......+.+.+++++++.+|.+.+ +|++++| +++
T Consensus 31 ~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~v~~~sG-s~a 104 (420)
T 3gbx_A 31 EHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYA---NVQPHSG-SQA 104 (420)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEE---ECCCSSH-HHH
T ss_pred cceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCc---eeEecCc-HHH
Confidence 35666655554 588899998887632 21 0111234455556788888888544 6878888 678
Q ss_pred HHHHHHHhccCCCeEEEcCCCcHHHH---HHHH--HcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCC
Q 043334 685 FNKLVLCCILEGGTLCFPAGSNGNYV---SAAR--FLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINP 759 (903)
Q Consensus 685 l~~ll~~l~~pGD~Vlv~~P~y~~~~---~~~~--~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NP 759 (903)
+..++.+++++||+|+++.|+|+.+. .... ..+...++++.+ +++.+|++++++++++.+.++|++++|+ ||
T Consensus 105 ~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~-~~ 181 (420)
T 3gbx_A 105 NFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSA-YS 181 (420)
T ss_dssp HHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTT-CC
T ss_pred HHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCc-cC
Confidence 88888999999999999999998743 2222 234566666665 4577999999999987433689898998 98
Q ss_pred cccCCCHHHHHHHHHHHHhCCcEEEEecCCCCC-ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccccee
Q 043334 760 TGLLYSNKEIENILTVCAKYGARVVIDTAFSGL-EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF 838 (903)
Q Consensus 760 TG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l-~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi 838 (903)
+ ..+ +++|.++|+++|++||+||+|... .+.+... . .+. ...++++|+||+++ |.|.
T Consensus 182 ~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~------~---~~~------~~di~~~s~sK~~~--g~~g 239 (420)
T 3gbx_A 182 G--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYP------N---PVP------HAHVVTTTTHKTLA--GPRG 239 (420)
T ss_dssp S--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSC------C---STT------TSSEEEEESSGGGC--SCSC
T ss_pred C--ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCC------c---ccc------cCCEEEeecccCCC--CCCc
Confidence 5 555 889999999999999999998532 2222211 0 011 24589999999985 6667
Q ss_pred eEEEeCc--HHHHHHHHhCCC---CCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHH
Q 043334 839 GFLVLNH--PQLVDAFSSFPG---LSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKRL 901 (903)
Q Consensus 839 G~lv~~~--~~li~~l~~~~~---~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l 901 (903)
||+++++ ..+.+.+..... ..+++...+.++..++. .. .+++++++++.++++++.+
T Consensus 240 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~--~~----~~~~~~~~~~~~~~~~~~l 301 (420)
T 3gbx_A 240 GLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALK--EA----MEPEFKVYQQQVAKNAKAM 301 (420)
T ss_dssp EEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHH--HT----TSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHH--HH----HhHhHHHHHHHHHHHHHHH
Confidence 9999998 237777765322 23444555555444442 11 0133445555555555544
No 195
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.73 E-value=1.1e-16 Score=183.34 Aligned_cols=176 Identities=13% Similarity=0.068 Sum_probs=138.5
Q ss_pred cCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCE
Q 043334 644 QNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKAN 719 (903)
Q Consensus 644 y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~ 719 (903)
|.+.....+.++.+++.+++..|.+ +.++++|+++++..++.+++++||+|+++.|.|.+....+ +..|++
T Consensus 74 ~~y~r~~~p~~~~le~~lA~l~g~~-----~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~ 148 (415)
T 2fq6_A 74 LFYGRRGTLTHFSLQQAMCELEGGA-----GCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVT 148 (415)
T ss_dssp CCCTTTCCHHHHHHHHHHHHHHTCS-----EEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCE
T ss_pred ccccCCCCchHHHHHHHHHHHhCCC-----eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcE
Confidence 3333334566778888888888863 3555567789999999999999999999999999877655 457999
Q ss_pred EEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHh--CCcEEEEecCCCCCccCCC
Q 043334 720 IVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAK--YGARVVIDTAFSGLEFNYE 797 (903)
Q Consensus 720 vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k--~~i~VI~DeaY~~l~f~~~ 797 (903)
++.++.+ |++++++++++++ ++|++++|+ ||||.+++ +++|.++|++ +|+++|+|++|+...+ ..
T Consensus 149 v~~v~~~-------d~~~le~ai~~~t-klV~~e~~~-NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~~ 215 (415)
T 2fq6_A 149 TSWFDPL-------IGADIVKHLQPNT-KIVFLESPG-SITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-FK 215 (415)
T ss_dssp EEEECTT-------CGGGGGGGCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-SC
T ss_pred EEEECCC-------CHHHHHHhhccCC-cEEEEECCC-CCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-CC
Confidence 9999763 6788999998776 599999998 99999998 7899999999 9999999999964321 11
Q ss_pred CCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce-eeEEEeCcHHHHHHHHhC
Q 043334 798 GWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK-FGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 798 ~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR-iG~lv~~~~~li~~l~~~ 855 (903)
+ +. . +..+++.|+||.++.+|.+ .||++++++ +++.+...
T Consensus 216 --------p-~~----~----g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~ 256 (415)
T 2fq6_A 216 --------A-LD----F----GIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLREN 256 (415)
T ss_dssp --------G-GG----G----TCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHH
T ss_pred --------c-cc----c----CCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHH
Confidence 1 11 1 2578999999999988876 589999876 77777654
No 196
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.73 E-value=9.8e-17 Score=183.75 Aligned_cols=262 Identities=11% Similarity=0.066 Sum_probs=170.7
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHH
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKL 688 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~l 688 (903)
..|...+|+..|. +.++ .++.+.+++.+.+.+.....+..+...++++.+++.++ . ++ +|++|+|+++++..+
T Consensus 50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~--~~-~v~~~~sGsea~~~a 125 (429)
T 4e77_A 50 VDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVP-T--MD-MVRMVNSGTEATMSA 125 (429)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-T--CS-EEEEESSHHHHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCC-C--CC-EEEEeCcHHHHHHHH
Confidence 4677899998665 3344 58899999999887643222345677888888988776 2 34 899999999999998
Q ss_pred HHHhc--cCCCeEEEcCCCcHHHHHHHH-HcC--CEEEEecCCCCCCc------------ccCHHHHHHHhhcC-CCcEE
Q 043334 689 VLCCI--LEGGTLCFPAGSNGNYVSAAR-FLK--ANIVNIPTESEVGF------------KMTEKTLVTILETV-KKPWV 750 (903)
Q Consensus 689 l~~l~--~pGD~Vlv~~P~y~~~~~~~~-~~G--~~vv~v~~~~~~~f------------~ld~~~L~~~l~~~-~~~~v 750 (903)
+.... .+++.|++.+++|..+...+. ..| ......+.. .++ ..|+++|+++++.. ....+
T Consensus 126 l~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 203 (429)
T 4e77_A 126 IRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNS--PGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVAC 203 (429)
T ss_dssp HHHHHHHHCCCEEEEETTCCCC------------------CCC--TTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCc--CCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEE
Confidence 87543 356789999998876554221 111 111111111 011 02789999998752 22478
Q ss_pred EEECCCCCCcccCCC--HHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc
Q 043334 751 YISGPTINPTGLLYS--NKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS 828 (903)
Q Consensus 751 il~~P~~NPTG~v~s--~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S 828 (903)
++++|+ ||+|.++. .+.+++|.++|++||+++|+||+|.++ ..+... ........+ . +.|||
T Consensus 204 vi~ep~-~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~-------~~~~~~~~p----d---i~t~s 267 (429)
T 4e77_A 204 IIVEPV-AGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAG-------AQDYYHVIP----D---LTCLG 267 (429)
T ss_dssp EEECSS-BCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTC-------HHHHTTCCC----S---EEEEE
T ss_pred EEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcch-------HHHhcCCCC----C---eeeec
Confidence 888998 66654443 455999999999999999999999876 433321 122222221 1 34999
Q ss_pred hhcccccceeeEEEeCcHHHHHHHHhC----C-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHH
Q 043334 829 LKMLTGALKFGFLVLNHPQLVDAFSSF----P-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSK 899 (903)
Q Consensus 829 K~~g~~GlRiG~lv~~~~~li~~l~~~----~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~ 899 (903)
|.++ +|+|+||++++++ +++.+... . .+++.+.+.+.++.++|+.-+. +.+.+.+.++++.++++.+
T Consensus 268 K~~~-~G~~~G~~~~~~~-~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~ 339 (429)
T 4e77_A 268 KIIG-GGMPVGAFGGRRE-VMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ--VGVYETLTELTDSLATGLR 339 (429)
T ss_dssp GGGG-TTSCCEEEEECHH-HHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHH
T ss_pred cccc-CCCCeEEEEECHH-HHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 9998 7999999999887 88887752 2 2667889999999998852211 2344455555555555443
No 197
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.72 E-value=1.3e-16 Score=184.68 Aligned_cols=209 Identities=15% Similarity=0.022 Sum_probs=151.9
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccC---------CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHH
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQN---------MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSL 684 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~---------~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~a 684 (903)
+++.+.|+.+... +.|+.+.+++.+.+..+. ...+..++.+.+++++++.+|.+.+ +|++|+|++++
T Consensus 65 ~~~~iyld~~~~g-~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---~v~~t~g~t~a 140 (465)
T 3e9k_A 65 DENAIYFLGNSLG-LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK---EIALMNALTVN 140 (465)
T ss_dssp TCBCEECBTTTSC-CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG---GEEECSCHHHH
T ss_pred CCCeEEecCCccC-CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC---CEEEECCHHHH
Confidence 4578888876544 334555555555443211 1124456667788888888888643 89999999999
Q ss_pred HHHHHHHhccCCCe---EEEcCCCcHHHH----HHHHHcCCEEE-----EecCCCCCCcccCHHHHHHHhh---cCCCcE
Q 043334 685 FNKLVLCCILEGGT---LCFPAGSNGNYV----SAARFLKANIV-----NIPTESEVGFKMTEKTLVTILE---TVKKPW 749 (903)
Q Consensus 685 l~~ll~~l~~pGD~---Vlv~~P~y~~~~----~~~~~~G~~vv-----~v~~~~~~~f~ld~~~L~~~l~---~~~~~~ 749 (903)
+..++.++++|||. |+++.|+|++.. ..++..|++++ .++.+ +++.+|+++++++++ +++ ++
T Consensus 141 l~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~--~~~~~d~~~l~~~i~~~~~~~-~l 217 (465)
T 3e9k_A 141 LHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPRE--GEETLRIEDILEVIEKEGDSI-AV 217 (465)
T ss_dssp HHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCT--TCSSCCHHHHHHHHHHHGGGE-EE
T ss_pred HHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCC--CCCccCHHHHHHHHHhcCCCe-EE
Confidence 99999999887765 999999999844 46677898852 23432 457799999999996 344 58
Q ss_pred EEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCch
Q 043334 750 VYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSL 829 (903)
Q Consensus 750 vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK 829 (903)
|++++|+ ||||.+++ +++|.++|+++|++||+|++++... .+ .. +. .. +..++++|++|
T Consensus 218 v~~~~~~-n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~---~~---~~----~~---~~----~~D~~~~s~~K 276 (465)
T 3e9k_A 218 ILFSGVH-FYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGN---VE---LY----LH---DW----GVDFACWCSYK 276 (465)
T ss_dssp EEEESBC-TTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTT---SC---CC----HH---HH----TCCEEEECSSS
T ss_pred EEEeCcc-cCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCC---cC---Cc----hh---hc----CCCEEEECccc
Confidence 9999998 99999998 7888899999999999999985311 11 11 11 11 25689999999
Q ss_pred hcc-cccceeeEEEeCcHHHHHHH
Q 043334 830 KML-TGALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 830 ~~g-~~GlRiG~lv~~~~~li~~l 852 (903)
.++ .|| ++|+++++++ +++.+
T Consensus 277 ~l~~gp~-~~g~l~~~~~-~~~~~ 298 (465)
T 3e9k_A 277 YLNAGAG-GIAGAFIHEK-HAHTI 298 (465)
T ss_dssp TTCCCTT-CCCEEEECGG-GTTTS
T ss_pred ccccCCC-ceEEEEEcHH-HHhhc
Confidence 994 344 7999999876 65544
No 198
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.72 E-value=2.2e-17 Score=183.80 Aligned_cols=197 Identities=10% Similarity=0.000 Sum_probs=135.8
Q ss_pred CCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCC--eEEEcCCCcHHHHH---HHHHcCCEEEE
Q 043334 648 ESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGG--TLCFPAGSNGNYVS---AARFLKANIVN 722 (903)
Q Consensus 648 ~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD--~Vlv~~P~y~~~~~---~~~~~G~~vv~ 722 (903)
+|..+....+++.+++++|.+. .+++++| ++++..++.+++.+|| .|+++.++|..+.. .....|++++.
T Consensus 43 y~~~~~~~~l~~~la~~~~~~~----~i~~~~G-~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~ 117 (357)
T 3lws_A 43 YGTGAIIEPFEQKFADVLGMDD----AVFFPSG-TMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETIL 117 (357)
T ss_dssp TTEETTHHHHHHHHHHHHTCSE----EEEESCH-HHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEE
T ss_pred ccCChHHHHHHHHHHHHhCCCc----EEEecCc-HHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccCcEEEE
Confidence 3433445566666677777632 4666555 5677788888999998 77777777665433 45677999999
Q ss_pred ecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCc-ccCCCHHHHHHHHHHHHhCCcEEEEecCCCC--CccCCCCC
Q 043334 723 IPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPT-GLLYSNKEIENILTVCAKYGARVVIDTAFSG--LEFNYEGW 799 (903)
Q Consensus 723 v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPT-G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~--l~f~~~~~ 799 (903)
++.+ ++.+|+++++++. ++ +++++++|+ ||| |.+++.+++++|+++|+++|++||+|++|.. ..+.+..
T Consensus 118 v~~~---~~~~d~~~l~~~~--~~-~~v~~~~p~-np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~- 189 (357)
T 3lws_A 118 VGAA---DRLMTLDEIKALP--DI-ACLLLELPQ-REIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKT- 189 (357)
T ss_dssp CSCT---TSCCCHHHHHTCC--SC-SEEEEESSB-GGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC-
T ss_pred ecCC---CCCcCHHHHhcCc--Cc-ceEEEEccc-ccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCC-
Confidence 9852 3569999999873 34 599999998 998 9999999999999999999999999999841 1122221
Q ss_pred CCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC----CCCCcHHHHHHHHHHH
Q 043334 800 GGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG----LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 800 s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~----~~~~s~~~Q~aa~~~L 873 (903)
. . .+... ..+++.|+||+++.++. ||++++++ +++.+.+... ......+.+.++...|
T Consensus 190 ----~---~-~~~~~-----~d~~~~s~sK~~~~~~g--g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 251 (357)
T 3lws_A 190 ----A---A-EIAGL-----FDSIYISFYKGLGGIAG--AILAGPAA-FCQTARIWKRRYGGDLISLYPYIVSADYYY 251 (357)
T ss_dssp ----H---H-HHHTT-----SSEEEEESSSTTCCSSC--EEEEECHH-HHHHHHHHHHHTTCCCSCCHHHHHHHHHHH
T ss_pred ----h---H-HHHhc-----CCEEEEeccccCCCCce--EEEEcCHH-HHHHHHHHHHHhcCCcccchHHHHHHHHHH
Confidence 1 1 11111 12347899999943332 99999887 8888875432 2223344555555556
No 199
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.72 E-value=1.7e-17 Score=180.31 Aligned_cols=165 Identities=21% Similarity=0.260 Sum_probs=121.9
Q ss_pred cccCCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccccc
Q 043334 2 MVIPSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDE 81 (903)
Q Consensus 2 ~~~p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~ 81 (903)
.|.|++|+|+..+..+.+.+..... ..++.+|||+|||+|.+++.+++. ++.+|+|+|+|+.+++.|++|+..++++
T Consensus 96 ~v~~~~lipr~~te~lv~~~l~~~~-~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~- 172 (284)
T 1nv8_A 96 LVEEGVFVPRPETEELVELALELIR-KYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVS- 172 (284)
T ss_dssp ECCTTSCCCCTTHHHHHHHHHHHHH-HHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCT-
T ss_pred EeCCCceecChhHHHHHHHHHHHhc-ccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCC-
Confidence 4789999999766655554332110 014579999999999999999998 8899999999999999999999988872
Q ss_pred CCCCcchhhhcccCCcEEEEEccccccccCCCCce---eEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccc
Q 043334 82 KGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQL---ERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQG 158 (903)
Q Consensus 82 ~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~f---D~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~ 158 (903)
++++++++|+.+... ++| |+|++||||+.... .+..++. +.+ ..++.+
T Consensus 173 --------------~~v~~~~~D~~~~~~---~~f~~~D~IvsnPPyi~~~~--~l~~~v~-~ep---------~~al~~ 223 (284)
T 1nv8_A 173 --------------DRFFVRKGEFLEPFK---EKFASIEMILSNPPYVKSSA--HLPKDVL-FEP---------PEALFG 223 (284)
T ss_dssp --------------TSEEEEESSTTGGGG---GGTTTCCEEEECCCCBCGGG--SCTTSCC-CSC---------HHHHBC
T ss_pred --------------CceEEEECcchhhcc---cccCCCCEEEEcCCCCCccc--ccChhhc-cCc---------HHHhcC
Confidence 469999999988643 278 99999999997554 2333333 222 223333
Q ss_pred cccccccHHHHHHHHHHHh-hcccCCcEEEEEeCCCCcHHHHHHHHHHC
Q 043334 159 FVEDQFGLGLIARAVEEGI-GVIKPSGIMIFNMGGRPGQGVCKRLFERR 206 (903)
Q Consensus 159 ~v~~~~g~~~~~~~l~~~~-~~LkpgG~ll~~~~~~~~~~~l~~ll~~~ 206 (903)
+.+|+ .+++++. +.|+|||.++++++..+.... .+++++.
T Consensus 224 ---~~dgl----~~~~~i~~~~l~pgG~l~~e~~~~q~~~v-~~~~~~~ 264 (284)
T 1nv8_A 224 ---GEDGL----DFYREFFGRYDTSGKIVLMEIGEDQVEEL-KKIVSDT 264 (284)
T ss_dssp ---TTTSC----HHHHHHHHHCCCTTCEEEEECCTTCHHHH-TTTSTTC
T ss_pred ---CCcHH----HHHHHHHHhcCCCCCEEEEEECchHHHHH-HHHHHhC
Confidence 45555 4677777 889999999999988765554 4455443
No 200
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.72 E-value=1.5e-17 Score=187.93 Aligned_cols=249 Identities=10% Similarity=0.018 Sum_probs=163.6
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHHHH-ccCC-------CCCc---hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFESFA-RQNM-------SESE---IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQS 683 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~al~-~y~~-------~~G~---~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~ 683 (903)
..+++++.+ +++ |+.+.+++.+.+. .+.. ..|. .++.+.+++++++++|.+.. .|++++| ++
T Consensus 24 ~~~~~~~~~-~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~---~i~~~sG-t~ 96 (405)
T 2vi8_A 24 AKIELIASE-NFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHA---NVQPHSG-AQ 96 (405)
T ss_dssp HSEECCTTC-CCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE---ECCCSSH-HH
T ss_pred cceeeccCc-ccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce---EEEecCc-HH
Confidence 346666544 333 8889999888774 3311 1132 23455566788888887633 5667788 99
Q ss_pred HHHHHHHHhccCCCeEEEcCCCcHHHHH-H--HHHcC--CEEEEecCCCCCCcccCHHHHHHHhhc-CCCcEEEEECCCC
Q 043334 684 LFNKLVLCCILEGGTLCFPAGSNGNYVS-A--ARFLK--ANIVNIPTESEVGFKMTEKTLVTILET-VKKPWVYISGPTI 757 (903)
Q Consensus 684 al~~ll~~l~~pGD~Vlv~~P~y~~~~~-~--~~~~G--~~vv~v~~~~~~~f~ld~~~L~~~l~~-~~~~~vil~~P~~ 757 (903)
++..++.+++++||.|+++.|+|+.+.. . +...| .+++.+++++ +++.+|++++++.+++ ++ +++++ +|+
T Consensus 97 a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~-~~v~~-~~~- 172 (405)
T 2vi8_A 97 ANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRP-KLIVA-AAA- 172 (405)
T ss_dssp HHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCC-SEEEE-CCS-
T ss_pred HHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCC-eEEEE-eCC-
Confidence 9999999999999999999999987743 1 12333 4888888753 3577999999999986 55 46655 665
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcc-cccc
Q 043334 758 NPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKML-TGAL 836 (903)
Q Consensus 758 NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g-~~Gl 836 (903)
|+ |...+ +++|.++|+++|++||+||+|+...+..... . ..+. ...++++|+||.++ ++|
T Consensus 173 ~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~------~--~~~~------~~di~~~s~sK~~~g~~g- 233 (405)
T 2vi8_A 173 AY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLH------P--NPVP------YAHFVTTTTHKTLRGPRG- 233 (405)
T ss_dssp SC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSS------C--CSTT------TCSEEEEESSSTTCCCSC-
T ss_pred CC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcC------C--Cccc------cCCEEEEeccccCCCCCC-
Confidence 54 44444 8899999999999999999997322211111 0 0011 13489999999997 666
Q ss_pred eeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHH-HHHHhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 043334 837 KFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAI-KKLLGLRERKARDLMNAVAEHIRNLESRSKRLK 902 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa-~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~l~ 902 (903)
||++++++ +++.+..... ..+.+.+.|.++ ..++.... ..+++++++.++++++.+.
T Consensus 234 --G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~------~~~~~~~~~~~~~~~~~l~ 293 (405)
T 2vi8_A 234 --GMILCQEQ-FAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEAL------QDDFKAYAKRVVDNAKRLA 293 (405)
T ss_dssp --EEEEECHH-HHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH------SHHHHHHHHHHHHHHHHHH
T ss_pred --eEEEEcHH-HHHHHHhhhcccccCCCCHHHHHHHHHHHHHHH------hhhHHHHHHHHHHHHHHHH
Confidence 99999866 8888876532 333323444444 45663101 1355566666666666553
No 201
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.72 E-value=2.5e-16 Score=175.94 Aligned_cols=192 Identities=13% Similarity=0.080 Sum_probs=145.9
Q ss_pred CCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh---ccCCCeEEEcCC
Q 043334 628 PIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC---ILEGGTLCFPAG 704 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l---~~pGD~Vlv~~P 704 (903)
++++.+++++.+.+.......+ +..+.+++.+++++|.+ ++++|+|+++++..++.++ +++||+|+++.|
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~--~~~~~l~~~la~~~~~~-----~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~ 82 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSKQLTQG--KRSLLFEEALCEFLGVK-----HALVFNSATSALLTLYRNFSEFSADRNEIITTPI 82 (375)
T ss_dssp CCCHHHHHHHHHHHTSSCCSSS--HHHHHHHHHHHHHHTCS-----EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSS
T ss_pred CCCHHHHHHHHHHHHcCcccCC--hHHHHHHHHHHHHhCCC-----eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCC
Confidence 4678899999988865322222 23445555566666653 6999999999999999999 899999999999
Q ss_pred CcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEE
Q 043334 705 SNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVV 784 (903)
Q Consensus 705 ~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI 784 (903)
+|+.+...++..|++++.++++++ + .+|++++++.+++++ ++|+++ ||||.+.+ +++|.++|+++|++||
T Consensus 83 ~~~~~~~~~~~~g~~~~~~~~~~~-~-~~d~~~l~~~i~~~~-~~v~~~----~~tG~~~~---l~~i~~l~~~~~~~li 152 (375)
T 2fnu_A 83 SFVATANMLLESGYTPVFAGIKND-G-NIDELALEKLINERT-KAIVSV----DYAGKSVE---VESVQKLCKKHSLSFL 152 (375)
T ss_dssp SCTHHHHHHHHTTCEEEECCBCTT-S-SBCGGGSGGGCCTTE-EEEEEE----CGGGCCCC---HHHHHHHHHHHTCEEE
T ss_pred ccHhHHHHHHHCCCEEEEeccCCC-C-CCCHHHHHhhcCcCc-eEEEEe----CCcCCccC---HHHHHHHHHHcCCEEE
Confidence 999999999999999999999753 3 689999999887655 466665 45899988 7889999999999999
Q ss_pred EecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc--hhcccccceeeEEEe-CcHHHHHHHHhC
Q 043334 785 IDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS--LKMLTGALKFGFLVL-NHPQLVDAFSSF 855 (903)
Q Consensus 785 ~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S--K~~g~~GlRiG~lv~-~~~~li~~l~~~ 855 (903)
+|++|+...+... ..+... ..+.+.||| |.++. | +|++++ +++++++.+...
T Consensus 153 ~D~a~~~~~~~~~-----------~~~~~~-----~~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~ 207 (375)
T 2fnu_A 153 SDSSHALGSEYQN-----------KKVGGF-----ALASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLF 207 (375)
T ss_dssp EECTTCTTCEETT-----------EETTSS-----SSEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHH
T ss_pred EECccccCCeECC-----------eecccc-----CCeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHH
Confidence 9999965332110 011111 247889999 99975 7 798888 545587777654
No 202
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.71 E-value=3.2e-16 Score=167.66 Aligned_cols=204 Identities=16% Similarity=0.172 Sum_probs=135.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++..+ .+|+|+|+++.+++.|++|+..+++ .++++++++|+.+..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~---------------~~~v~~~~~D~~~~~ 112 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQL---------------EDQIEIIEYDLKKIT 112 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTC---------------TTTEEEECSCGGGGG
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCC---------------cccEEEEECcHHHhh
Confidence 578999999999999999998854 4999999999999999999999887 357999999999886
Q ss_pred cC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.. ..++||+|++||||+.............. +. ........+..+++.+.++|||||++++
T Consensus 113 ~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~--------------~~----a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 113 DLIPKERADIVTCNPPYFATPDTSLKNTNEHF--------------RI----ARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp GTSCTTCEEEEEECCCC-----------------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhccCCccEEEECCCCCCCccccCCCCchHH--------------Hh----hhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 42 13489999999999865221111100000 00 0112233456899999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeeccCCcceeEEecccCCCcccHHHHHHhhh
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEKNSPHRFEFFMGLSGDLPICARTAWAYGK 268 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~~~~~~f~f~~~~~~~~p~~~~~~~~~~~ 268 (903)
..+.....+. ...+++.||....+...+-. . .......+++..++. +
T Consensus 175 ~~~~~~~~~~-~~~l~~~~~~~~~~~~v~~~-~------~~~~~~~l~~~~k~~-------------------------~ 221 (259)
T 3lpm_A 175 VHRPERLLDI-IDIMRKYRLEPKRIQFVHPR-S------DREANTVLVEGIKDG-------------------------K 221 (259)
T ss_dssp EECTTTHHHH-HHHHHHTTEEEEEEEEEESS-T------TSCCSEEEEEEEETC-------------------------C
T ss_pred EEcHHHHHHH-HHHHHHCCCceEEEEEeecC-C------CCCcEEEEEEEEeCC-------------------------C
Confidence 8776655444 57888999988776432200 0 112233344444432 2
Q ss_pred cCcceeeeeeeeeccccCchhHHHHHHHHhcc
Q 043334 269 AGGRISHALSVYSCQLHQPNQVKKIFKFLKNG 300 (903)
Q Consensus 269 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~g 300 (903)
.+..+.-.+.+|+...+++.+++++.+.-..|
T Consensus 222 ~~~~~~~~l~i~~~~g~yt~~~~~~~~~~~~~ 253 (259)
T 3lpm_A 222 PGVKYVPPVIVYDELGEYTPVIKEILYGESEG 253 (259)
T ss_dssp SCCEEEEEEECBCTTSSBCHHHHHHHHC----
T ss_pred CCCeecCCEEEECCCCCcCHHHHHHHhhhhcc
Confidence 33456677888888777888888886644333
No 203
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.71 E-value=2.9e-16 Score=180.43 Aligned_cols=163 Identities=12% Similarity=0.067 Sum_probs=129.3
Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH----HHHHcCCEEE
Q 043334 646 MSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS----AARFLKANIV 721 (903)
Q Consensus 646 ~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~----~~~~~G~~vv 721 (903)
+.+...+.++++++.+++.+|.+. .+++++| ++++..++.++++|||+|++++|+|+.+.. .++..|++++
T Consensus 76 y~r~~~p~~~~le~~lA~l~g~~~----~v~~~sG-~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~ 150 (430)
T 3ri6_A 76 YSRSSNPTVEDLEQRLKNLTGALG----VLALGSG-MAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVR 150 (430)
T ss_dssp ----CCHHHHHHHHHHHHHHTCSE----EEEESCH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEE
T ss_pred ccCCCCHHHHHHHHHHHHHHCCCc----EEEECCH-HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEE
Confidence 333344667888888888888642 4666666 589998999999999999999999998887 6678999999
Q ss_pred EecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCC
Q 043334 722 NIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGG 801 (903)
Q Consensus 722 ~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~ 801 (903)
.++.+ |++++++++++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+|++|+...+. .
T Consensus 151 ~v~~~-------d~~~l~~ai~~~t-~~v~~e~p~-NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~--~--- 213 (430)
T 3ri6_A 151 FVDVM-------DSLAVEHACDETT-KLLFLETIS-NPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL--E--- 213 (430)
T ss_dssp EECTT-------CHHHHHHHCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC--C---
T ss_pred EeCCC-------CHHHHHHhhCCCC-eEEEEECCC-CCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC--C---
Confidence 99874 7899999998766 599999998 99999998 778999999999999999999633221 0
Q ss_pred CchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 802 WDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 802 ~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
+ . .. +..+++.|+||.++.+|..+|.+++
T Consensus 214 ----~-~----~~----g~div~~S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 214 ----A-K----RL----GVDIEVLSSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp ----G-G----GG----TCSEEEEECCCEEETTEEECCEEEE
T ss_pred ----h-H----Hc----CCEEEEECCcccccCCCCceEEEEE
Confidence 0 1 11 3578999999999888877776665
No 204
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.71 E-value=3e-16 Score=178.79 Aligned_cols=191 Identities=15% Similarity=0.105 Sum_probs=144.0
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH-----HHcCCEEE
Q 043334 647 SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA-----RFLKANIV 721 (903)
Q Consensus 647 ~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~-----~~~G~~vv 721 (903)
.....+.++++++.+++..|.+ . .+++++| ++++.. +..++++||+|++++|+|......+ +..|++++
T Consensus 62 ~r~~~p~~~~l~~~la~l~g~~-~---~~~~~sG-~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~ 135 (400)
T 3nmy_A 62 SRTHNPTRFAYERCVAALEGGT-R---AFAFASG-MAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFS 135 (400)
T ss_dssp TTTCCHHHHHHHHHHHHHHTCS-E---EEEESSH-HHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEE
T ss_pred ccCCCHHHHHHHHHHHHHhCCC-C---EEEecCH-HHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEE
Confidence 3334556778888888888754 2 4555555 888887 5678999999999999999655553 34699999
Q ss_pred EecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCC
Q 043334 722 NIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGG 801 (903)
Q Consensus 722 ~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~ 801 (903)
.++.+ |++++++++++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+||+|....+.. +
T Consensus 136 ~v~~~-------d~~~l~~~i~~~~-~~v~~e~~~-np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~-~--- 199 (400)
T 3nmy_A 136 FVDLT-------DPAAFKAAIRADT-KMVWIETPT-NPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR-P--- 199 (400)
T ss_dssp EECTT-------SHHHHHHHCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC-G---
T ss_pred EECCC-------CHHHHHHHhccCC-CEEEEECCC-CCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC-h---
Confidence 99873 6899999998766 599999998 99999997 8899999999999999999995322211 1
Q ss_pred CchhhhhhhhccCCCCCCceEEEccCchhcccccceeeE--EEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 802 WDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGF--LVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 802 ~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~--lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
.. . +..+++.|+||.++.+|.++|+ +++.++++++.+..... ....+....+++...+
T Consensus 200 ------~~----~----g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l 261 (400)
T 3nmy_A 200 ------LS----L----GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGL 261 (400)
T ss_dssp ------GG----G----TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHH
T ss_pred ------hh----c----CCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhH
Confidence 11 1 3579999999999989988876 56556558888776543 4455666666665555
No 205
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.71 E-value=2.2e-16 Score=177.01 Aligned_cols=192 Identities=12% Similarity=0.050 Sum_probs=142.6
Q ss_pred CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-ccCCCeEEEcCCCcH
Q 043334 629 IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC-ILEGGTLCFPAGSNG 707 (903)
Q Consensus 629 ~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l-~~pGD~Vlv~~P~y~ 707 (903)
.++.+.+++.+.+..... +..+..+.+++.+++++|.+ ++++++|+++++..++.++ +++||+|+++.|+|.
T Consensus 15 ~~~~~~~a~~~~~~~~~~--~~~~~~~~l~~~la~~~~~~-----~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~ 87 (373)
T 3frk_A 15 IEYEIKFKFEEIYKRNWF--ILGDEDKKFEQEFADYCNVN-----YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFI 87 (373)
T ss_dssp HHHHHHHHHHHHHHHTCC--SSSHHHHHHHHHHHHHHTSS-----EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCT
T ss_pred CCHHHHHHHHHHHHCCCc--cCCchHHHHHHHHHHHhCCC-----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence 356677777777655322 22233344444445555542 5888888899999999999 999999999999999
Q ss_pred HHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEec
Q 043334 708 NYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDT 787 (903)
Q Consensus 708 ~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~De 787 (903)
.+...++..|++++.+++++ ++|.+|++++++.+++++ ++|+ |+ ||||.+.+ +++|.++|+++|++||+|+
T Consensus 88 ~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~-~~v~---~~-n~~G~~~~---l~~i~~l~~~~~~~li~D~ 158 (373)
T 3frk_A 88 ATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKT-KAII---AV-HLYGQPAD---MDEIKRIAKKYNLKLIEDA 158 (373)
T ss_dssp HHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTE-EEEE---EE-CCTTCCCC---HHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCC-eEEE---EE-CCCcCccc---HHHHHHHHHHcCCEEEEEC
Confidence 99999999999999999875 457899999999987755 3444 76 99999887 7788999999999999999
Q ss_pred CCCCC-ccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCc--hhcccccceeeEEEeCcHHHHHHHHh
Q 043334 788 AFSGL-EFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLS--LKMLTGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 788 aY~~l-~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~S--K~~g~~GlRiG~lv~~~~~li~~l~~ 854 (903)
+|+.. .+++... ... ..+++.||| |.++.+| +.|+++++++++++.+..
T Consensus 159 a~~~g~~~~~~~~------------~~~-----~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~ 210 (373)
T 3frk_A 159 AQAHGSLYKGMKV------------GSL-----GDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKA 210 (373)
T ss_dssp TTCTTCEETTEET------------TSS-----SSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHH
T ss_pred CcccCCEECCEec------------ccc-----ccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHH
Confidence 99742 2333221 111 247888888 8876335 489999987657776664
No 206
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.70 E-value=2.8e-16 Score=180.14 Aligned_cols=172 Identities=12% Similarity=0.069 Sum_probs=138.5
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEe--cCchHHHHHHHHHHhccCCCeEEEcC-CCcHHHHHH-----------HHHcCCE
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIY--ADCSQSLFNKLVLCCILEGGTLCFPA-GSNGNYVSA-----------ARFLKAN 719 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~v--t~Gs~~al~~ll~~l~~pGD~Vlv~~-P~y~~~~~~-----------~~~~G~~ 719 (903)
++++++.+++.+|.+. .++. ++|+++++..++.++++|||+|++++ |.|+.+... ++..|++
T Consensus 75 ~~~Le~~lA~l~g~e~----alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~ 150 (427)
T 3i16_A 75 RDSLDAVYARVFNTES----ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGIN 150 (427)
T ss_dssp HHHHHHHHHHHHTCSE----EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCE
T ss_pred HHHHHHHHHHHhCCcc----eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCE
Confidence 6778888888888753 2442 56667889999999999999999999 999987743 4567999
Q ss_pred EEEecCCCCCCcccCHHHHHHHhh--cCCCcEEEEEC----CCCCCcccCCCHHHHHHHHHHHHh--CCcEEEEecCCCC
Q 043334 720 IVNIPTESEVGFKMTEKTLVTILE--TVKKPWVYISG----PTINPTGLLYSNKEIENILTVCAK--YGARVVIDTAFSG 791 (903)
Q Consensus 720 vv~v~~~~~~~f~ld~~~L~~~l~--~~~~~~vil~~----P~~NPTG~v~s~eel~eI~~ia~k--~~i~VI~DeaY~~ 791 (903)
++.+++++ ++.+|+++++++++ +++ ++|++++ |+ ||||.+ .++++|+++|++ +|+++|+|++|+.
T Consensus 151 ~~~v~~~~--~g~~D~e~l~~~l~~~~~t-klV~i~~s~~~p~-nptg~i---~dl~~i~~la~~~~~g~~livD~a~~~ 223 (427)
T 3i16_A 151 YKQVDLKE--DGKPNLEEIEKVLKEDESI-TLVHIQRSTGYGW-RRALLI---EDIKSIVDCVKNIRKDIICFVDNCYGE 223 (427)
T ss_dssp EEECCCCT--TSSCCHHHHHHHHHTCTTE-EEEEEECSCCSSS-SCCCCH---HHHHHHHHHHHHHCTTSEEEEECTTTT
T ss_pred EEEecCcc--CCCcCHHHHHHHhhCCCCC-EEEEEEcCCCCCC-CCcccH---HHHHHHHHHHHHhCCCCEEEEECCCcc
Confidence 99999864 35689999999998 555 5999999 88 999876 679999999999 9999999999976
Q ss_pred CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHh
Q 043334 792 LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 792 l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~ 854 (903)
+.+...+ .. . +..++++|+||.+|.+| .+.||++++++ +++.+..
T Consensus 224 ~~~~~~p---------~~----~----gaDiv~~S~sK~lgg~g~~~gG~i~~~~~-li~~l~~ 269 (427)
T 3i16_A 224 FMDTKEP---------TD----V----GADLIAGSLIKNIGGGIAPTGGYLAGTKD-CIEKTSY 269 (427)
T ss_dssp TSSSSCG---------GG----G----TCSEEEEETTSGGGTTTCCSCEEEEECHH-HHHHHHH
T ss_pred ccccCCc---------cc----c----CCeEEEecCcccCCCCCCceEEEEEECHH-HHHHHHH
Confidence 5543322 11 1 25689999999998666 67799999877 9999887
No 207
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.70 E-value=3.3e-16 Score=179.58 Aligned_cols=172 Identities=12% Similarity=0.033 Sum_probs=136.8
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEe--cCchHHHHHHHHHHhccCCCeEEEcC-CCcHHHHH-----------HHHHcCCE
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIY--ADCSQSLFNKLVLCCILEGGTLCFPA-GSNGNYVS-----------AARFLKAN 719 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~v--t~Gs~~al~~ll~~l~~pGD~Vlv~~-P~y~~~~~-----------~~~~~G~~ 719 (903)
++.+++.+++.+|.+.. ++. ++|+++++..++.++++|||+|++++ |.|..+.. .++..|++
T Consensus 76 ~~~Le~~lA~l~g~e~a----lv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~ 151 (427)
T 3hvy_A 76 RDSLDRVYANIFNTESA----FVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVK 151 (427)
T ss_dssp HHHHHHHHHHHHTCSEE----EEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCE
T ss_pred HHHHHHHHHHHhCCCce----EEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCE
Confidence 67788888888886532 442 56667888989999999999999999 99988763 34567999
Q ss_pred EEEecCCCCCCcccCHHHHHHHhh--cCCCcEEEEEC----CCCCCcccCCCHHHHHHHHHHHHh--CCcEEEEecCCCC
Q 043334 720 IVNIPTESEVGFKMTEKTLVTILE--TVKKPWVYISG----PTINPTGLLYSNKEIENILTVCAK--YGARVVIDTAFSG 791 (903)
Q Consensus 720 vv~v~~~~~~~f~ld~~~L~~~l~--~~~~~~vil~~----P~~NPTG~v~s~eel~eI~~ia~k--~~i~VI~DeaY~~ 791 (903)
++.+++ + ++.+|+++++++++ +++ ++|++++ |+ ||||.+ .++++|+++|++ +|+++|+|++|+.
T Consensus 152 ~~~v~~-~--~~~~d~e~l~~~i~~~~~t-klV~i~~s~gyp~-nptg~v---~dl~~i~~ia~~~~~g~~livD~a~~~ 223 (427)
T 3hvy_A 152 YKMVDL-K--DGKVDINTVKEELKKDDSI-KLIHIQRSTGYGW-RKSLRI---AEIAEIIKSIREVNENVIVFVDNCYGE 223 (427)
T ss_dssp EEECCC-B--TTBCCHHHHHHHHHHCTTE-EEEEEESSCCSSS-SCCCCH---HHHHHHHHHHHHHCSSSEEEEECTTCT
T ss_pred EEEecC-C--CCCcCHHHHHHHhhCCCCC-EEEEEECCCCCCC-CccccH---HHHHHHHHHHHHhCCCCEEEEECCccc
Confidence 999998 2 46799999999998 555 5999999 88 999866 679999999999 8999999999976
Q ss_pred CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccc-ceeeEEEeCcHHHHHHHHhC
Q 043334 792 LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGA-LKFGFLVLNHPQLVDAFSSF 855 (903)
Q Consensus 792 l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G-lRiG~lv~~~~~li~~l~~~ 855 (903)
+.+...+ .. . +..++++|+||++|.+| .+.||++++++ +++.+...
T Consensus 224 ~~~~~~p---------~~----~----gaDiv~~S~sK~lgg~g~~~GG~i~~~~~-li~~l~~~ 270 (427)
T 3hvy_A 224 FVEEKEP---------TD----V----GADIIAGSLIKNIGGGIATTGGYIAGKEE-YVTQATFR 270 (427)
T ss_dssp TTSSSCG---------GG----G----TCSEEEEETTSGGGTTTCCSCEEEEECHH-HHHHHHHH
T ss_pred cccCCCC---------cc----c----CCeEEEECCcccccccccceEEEEEECHH-HHHHHHHH
Confidence 5543322 11 1 25689999999998655 46689999876 99998873
No 208
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.70 E-value=1.3e-16 Score=184.23 Aligned_cols=265 Identities=11% Similarity=0.091 Sum_probs=176.1
Q ss_pred CCCCCeEEccCCC--CCCC-CcHHHH-H-HHHH---HHHccCC--CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCch
Q 043334 612 TPNSGLIHMDVDQ--SFLP-IPSLVK-A-AIFE---SFARQNM--SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCS 681 (903)
Q Consensus 612 ~~~~~~IdLs~g~--p~~~-~p~~v~-~-al~~---al~~y~~--~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs 681 (903)
..|...+|+..|. ++++ .++.+. + ++.+ .+..... ..+..+.+.++++.+++.++. ..++ +|++|+|+
T Consensus 51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~-~~~~-~v~~~~~g 128 (449)
T 2cjg_A 51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGD-PALP-HLFFVEGG 128 (449)
T ss_dssp TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCC-TTCC-EEEEESSH
T ss_pred CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCC-CCCC-EEEEeCch
Confidence 3456688886554 4454 478899 8 8888 6655321 234556778888889888872 2334 89999999
Q ss_pred HHHHHHHHHHhc---c----------C-CCeEEEcCCCcHHHHHHHHH---------cC-----CEEEEecCCCCCCc--
Q 043334 682 QSLFNKLVLCCI---L----------E-GGTLCFPAGSNGNYVSAARF---------LK-----ANIVNIPTESEVGF-- 731 (903)
Q Consensus 682 ~~al~~ll~~l~---~----------p-GD~Vlv~~P~y~~~~~~~~~---------~G-----~~vv~v~~~~~~~f-- 731 (903)
++++..++..+. . + ||.|++.+|+|.++...+.. .| .+++.+|.++....
T Consensus 129 seA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 208 (449)
T 2cjg_A 129 ALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEP 208 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcc
Confidence 999999887543 2 2 89999999999765442211 12 25566665430011
Q ss_pred ------ccCHHHHHHHhhcC-CCcEEEEECCCCCCcc-cCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCc
Q 043334 732 ------KMTEKTLVTILETV-KKPWVYISGPTINPTG-LLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWD 803 (903)
Q Consensus 732 ------~ld~~~L~~~l~~~-~~~~vil~~P~~NPTG-~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s 803 (903)
..++++|++.++.. .+..+++++|.||||| .+++.+++++|.++|++||+++|+||+|.++.+.+..+ .
T Consensus 209 ~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~---~ 285 (449)
T 2cjg_A 209 AMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAW---A 285 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS---T
T ss_pred ccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcce---e
Confidence 24566788888631 1235666777669999 59999999999999999999999999998876665431 1
Q ss_pred hhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHH-----h-CC-CCCCCcHHHHHHHHHHHhcc
Q 043334 804 LEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFS-----S-FP-GLSKPHSTVRYAIKKLLGLR 876 (903)
Q Consensus 804 ~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~-----~-~~-~~~~~s~~~Q~aa~~~L~~~ 876 (903)
....+-.+ . +.||||.+ |+||++++++ +++.+. . .. .+.+.+.+.|.++.++|+.-
T Consensus 286 ----~~~~~~~~----d---i~t~sK~l-----~iG~~~~~~~-~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~ 348 (449)
T 2cjg_A 286 ----YQQLDVAP----D---IVAFGKKT-----QVCGVMAGRR-VDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVI 348 (449)
T ss_dssp ----HHHHTCCC----S---EEEECGGG-----SSEEEEECGG-GGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred ----ecccCCCc----e---EEEecCcc-----cEEEEEECHH-HhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHH
Confidence 11122121 2 23799987 7999999886 777522 1 12 26677899999999998421
Q ss_pred cccchhHHHHHHHHHHHHHHHHHH
Q 043334 877 ERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 877 ~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
.. +.+.+++.++++.++++.+.
T Consensus 349 ~~--~~~~~~~~~~~~~l~~~L~~ 370 (449)
T 2cjg_A 349 EA--EGLFERAVQHGKYLRARLDE 370 (449)
T ss_dssp HH--HTHHHHHHHHHHHHHHHHHH
T ss_pred Hh--ccHHHHHHHHHHHHHHHHHH
Confidence 11 23445566666666665543
No 209
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.69 E-value=1.4e-16 Score=180.39 Aligned_cols=240 Identities=11% Similarity=0.083 Sum_probs=157.3
Q ss_pred CCeEEccCCCCCCCCcHHHHHHHHHH---HHcc-CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEe-cCchHHHHHHHH
Q 043334 615 SGLIHMDVDQSFLPIPSLVKAAIFES---FARQ-NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIY-ADCSQSLFNKLV 689 (903)
Q Consensus 615 ~~~IdLs~g~p~~~~p~~v~~al~~a---l~~y-~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~v-t~Gs~~al~~ll 689 (903)
+..++++.| +.++|+.+++++.+. ...+ .......++.+++++++++.+|++ .++ +|++ |+|+++++..++
T Consensus 39 ~~~~~~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~-~i~~~t~g~t~al~~~~ 114 (398)
T 2fyf_A 39 PRDGRFGSG--PSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLP-DGY-EVILGNGGATAFWDAAA 114 (398)
T ss_dssp CSSCBCCSS--SCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTC-EEEEEETCHHHHHHHHH
T ss_pred cCCccccCC--CCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCC-CCc-eEEEeCCchhHHHHHHH
Confidence 346666654 335778888887662 1110 111112345788999999999987 333 7998 999999999999
Q ss_pred HHhccCCCeEEEcCCCcHH-HHHHHHHc--CCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCH
Q 043334 690 LCCILEGGTLCFPAGSNGN-YVSAARFL--KANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSN 766 (903)
Q Consensus 690 ~~l~~pGD~Vlv~~P~y~~-~~~~~~~~--G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~ 766 (903)
.+++++| .+.+..+.|.. ....+... |++++.++++ +++..+. .+++++ ++|++++|+ ||||.+++.
T Consensus 115 ~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~-~~v~~~~~~-nptG~~~~~ 184 (398)
T 2fyf_A 115 FGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSV-DVIAWAHNE-TSTGVAVAV 184 (398)
T ss_dssp HHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTC-SEEEEESEE-TTTTEECCC
T ss_pred HHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCC-CEEEEeCcC-CCcceecch
Confidence 9999987 22333444432 12245555 8899999886 3444443 144555 599999998 999999997
Q ss_pred HHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 767 KEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 767 eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
+++.++ +|++||+|++|+.... +. + +.+ ..+++.|+||.+|++| ++||++++++
T Consensus 185 ~~i~~~------~~~~vivD~a~~~~~~---~~---~-------~~~------~di~~~s~sK~~~~~g-g~g~l~~~~~ 238 (398)
T 2fyf_A 185 RRPEGS------DDALVVIDATSGAGGL---PV---D-------IAE------TDAYYFAPQKNFASDG-GLWLAIMSPA 238 (398)
T ss_dssp CCCTTC------C-CEEEEECTTTTTTS---CC---C-------GGG------CSEEEECTTSTTCSCS-SEEEEEECHH
T ss_pred HHhhhh------cCCeEEEEeccccCCc---cc---C-------ccc------CcEEEEecCcccCCCC-ceEEEEECHH
Confidence 666654 8999999999964321 10 0 111 3578999999999886 5999999887
Q ss_pred HHHHHHHhC-----------------------CCCCCCcHHHHHHHHHHHhcccccchhHHHH--HHHHHHHHHHHHHHH
Q 043334 847 QLVDAFSSF-----------------------PGLSKPHSTVRYAIKKLLGLRERKARDLMNA--VAEHIRNLESRSKRL 901 (903)
Q Consensus 847 ~li~~l~~~-----------------------~~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~--l~~~r~~y~~Rr~~l 901 (903)
+++.+.+. .....++...+.++..+|+. +.+. ++++++.++++++.+
T Consensus 239 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~-------~~~~g~~~~~~~~~~~~~~~l 310 (398)
T 2fyf_A 239 -ALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDW-------LVGNGGLDWAVKRTADSSQRL 310 (398)
T ss_dssp -HHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH-------HHHHTSHHHHHHHHHHHHHHH
T ss_pred -HHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHH-------HHHccCHHHHHHHHHHHHHHH
Confidence 87776421 12345667777777777731 1122 455566666666554
Q ss_pred h
Q 043334 902 K 902 (903)
Q Consensus 902 ~ 902 (903)
.
T Consensus 311 ~ 311 (398)
T 2fyf_A 311 Y 311 (398)
T ss_dssp H
T ss_pred H
Confidence 3
No 210
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.68 E-value=7.1e-16 Score=164.15 Aligned_cols=193 Identities=11% Similarity=0.082 Sum_probs=129.1
Q ss_pred cccCCcccCc----chhHHHHHHhhcC-CCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Q 043334 2 MVIPSIFIPE----DWSFTFYEGLNRH-PDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYL 76 (903)
Q Consensus 2 ~~~p~vfiP~----~w~~~~~~~L~~~-~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~ 76 (903)
.+.|++|+|+ .....++..+... +....++.+|||+|||+|.+++.++...++.+|+|+|+|+.|++.|++|+..
T Consensus 32 ~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~ 111 (254)
T 2h00_A 32 DIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQ 111 (254)
T ss_dssp CCCTTSCCCCHHHHHHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHH
T ss_pred ecCccccCCCccchHHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH
Confidence 5789999996 4444455444332 2111256799999999999999999987788999999999999999999988
Q ss_pred cccccCCCCcchhhhcccCCcEEEEEcccccc----ccCC-CCceeEEEECCCCCCCC-Cccch-hhHHhhhhhhhhhhh
Q 043334 77 NALDEKGQPIYDAEKKTLLDRVEFHESDLLAY----CRDH-DIQLERIVGCIPQILNP-NPDAM-SKIITENASEEFLYS 149 (903)
Q Consensus 77 ~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~----~~~~-~~~fD~Iv~NpPy~~~~-~~~~l-~~~~~~~~~~~~~~~ 149 (903)
++++ ++++++++|+.+. .... .++||+|++||||+... ....+ ...+..+.+...+
T Consensus 112 ~~~~---------------~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l-- 174 (254)
T 2h00_A 112 NNLS---------------DLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVN-- 174 (254)
T ss_dssp TTCT---------------TTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------
T ss_pred cCCC---------------ccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHH--
Confidence 8772 4699999997652 2111 13799999999998654 11111 0111111110000
Q ss_pred ccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 150 LSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 150 l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
...........+++.++..+++...+.++++|.+.+..+.......+.+++++.||..++..
T Consensus 175 ---~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 175 ---TGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp -----CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred ---hhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEE
Confidence 00111111223566778888888889999999999888877776667889999999877663
No 211
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.68 E-value=1.9e-15 Score=173.56 Aligned_cols=200 Identities=9% Similarity=0.014 Sum_probs=143.7
Q ss_pred CCCeEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh-
Q 043334 614 NSGLIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC- 692 (903)
Q Consensus 614 ~~~~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l- 692 (903)
+.+.|+++ .|+ .++.+.+++.+++.......| ...+.+++.+++++|.+ ++++++++++++..++.++
T Consensus 30 ~~~~i~~~--~~~--~~~~~~~a~~~~~~~~~~~~~--~~~~~l~~~la~~~g~~-----~~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 30 GKSVVPPS--GKV--IGTKELQLMVEASLDGWLTTG--RFNDAFEKKLGEYLGVP-----YVLTTTSGSSANLLALTALT 98 (437)
T ss_dssp TTSCBCSC--CCC--CCHHHHHHHHHHHHHCCCBSC--HHHHHHHHHHHHHHTCS-----EEEEESCHHHHHHHHHHHTT
T ss_pred CCccccCC--CCC--CCHHHHHHHHHHHHcCCcCCC--hHHHHHHHHHHHHHCCC-----cEEEeCCHHHHHHHHHHHhh
Confidence 44566664 333 346778888887764322222 23344444555555654 2444455558999989888
Q ss_pred --------ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEE-CCCCCCcccC
Q 043334 693 --------ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYIS-GPTINPTGLL 763 (903)
Q Consensus 693 --------~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~-~P~~NPTG~v 763 (903)
+++||+|+++.|+|+.+...++..|++++.+++++ ++|.+|++++++.+++++ ++|+++ +|+ ||
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~-~~v~~~~~~g-~~---- 171 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDI-PTYNVNASLIEAAVSDKT-KAIMIAHTLG-NL---- 171 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEET-TTTEECGGGHHHHCCTTE-EEEEEECGGG-CC----
T ss_pred hcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccC-ccCCcCHHHHHHhcCCCC-eEEEEeCCCC-Ch----
Confidence 88999999999999999999999999999999864 357899999999998766 578887 354 66
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCC-CccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEE
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSG-LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLV 842 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~-l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv 842 (903)
. ++++|.++|+++|++||+|++|+. ..+++.. +... ..+++.||||+++++|.|.||++
T Consensus 172 ~---~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~------------~~~~-----~d~~~~s~~~~k~l~~g~gg~~~ 231 (437)
T 3bb8_A 172 F---DLAEVRRVADKYNLWLIEDCCDALGSTYDGKM------------AGTF-----GDIGTVSFYPAKHITMGEGGAVF 231 (437)
T ss_dssp C---CHHHHHHHHHHHTCEEEEECTTCTTCEETTEE------------TTSS-----SSEEEEECSTTSSSCCSSCEEEE
T ss_pred h---cHHHHHHHHHHcCCEEEEECccccCceECCee------------cccc-----cCEEEEECcCCcCCCCCCeEEEE
Confidence 3 488999999999999999999973 3332211 1111 23778999999999999999999
Q ss_pred eCcHHHHHH
Q 043334 843 LNHPQLVDA 851 (903)
Q Consensus 843 ~~~~~li~~ 851 (903)
++++.+.+.
T Consensus 232 ~~~~~~~~~ 240 (437)
T 3bb8_A 232 TQSAELKSI 240 (437)
T ss_dssp ESCHHHHHH
T ss_pred eCCHHHHHH
Confidence 997633333
No 212
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.67 E-value=1.3e-15 Score=176.40 Aligned_cols=203 Identities=13% Similarity=0.109 Sum_probs=145.8
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchH-HHHHHHHHHhcc--CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCC
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ-SLFNKLVLCCIL--EGGTLCFPAGSNGNYVSAARFLKANIVNIPTE 726 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~-~al~~ll~~l~~--pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~ 726 (903)
..++.+++++++++.+|.+.+ +++|+|++ .++..++.++.. +|+.|++++++|+.+...++..|++++.+++.
T Consensus 131 ~~~~~~~~~~~la~~~g~~~~----~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~ 206 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLNVH----AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETV 206 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCCCE----EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHHHcCCCCC----EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEe
Confidence 445678899999999997632 99999999 455444444433 67889999999999999999999999999874
Q ss_pred C-CCCcccCHHHHHHHh-hc---CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCC
Q 043334 727 S-EVGFKMTEKTLVTIL-ET---VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGG 801 (903)
Q Consensus 727 ~-~~~f~ld~~~L~~~l-~~---~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~ 801 (903)
+ +++|.+|+++|++++ ++ .+..+|++++|| ||||.+.+ +++|.++|+++|+++++|++|+...++..
T Consensus 207 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~n-n~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~---- 278 (456)
T 2z67_A 207 LDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTF-FPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYL---- 278 (456)
T ss_dssp EETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSC-CTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHH----
T ss_pred ccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCC-CCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhh----
Confidence 2 246889999999999 52 222467789998 99999977 88889999999999999999975443110
Q ss_pred CchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCC--CCCCcHHHHHHHHHHH
Q 043334 802 WDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPG--LSKPHSTVRYAIKKLL 873 (903)
Q Consensus 802 ~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~--~~~~s~~~Q~aa~~~L 873 (903)
+.....+... ..+++.|++|.++ +++++||++++++++++.+..... ....+...+.++...+
T Consensus 279 ---~~~~~~~~~~-----~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l 343 (456)
T 2z67_A 279 ---EKLKKAFKYR-----VDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSM 343 (456)
T ss_dssp ---HHHHHHHTSC-----CSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHH
T ss_pred ---HHHHHhhCCC-----CCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHH
Confidence 0111112111 2467899999764 679999999965548887754322 1122345566666555
No 213
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.66 E-value=2.1e-15 Score=174.23 Aligned_cols=220 Identities=14% Similarity=0.135 Sum_probs=143.4
Q ss_pred CCCCeEEccCCCC------CCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHH
Q 043334 613 PNSGLIHMDVDQS------FLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFN 686 (903)
Q Consensus 613 ~~~~~IdLs~g~p------~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~ 686 (903)
.+.+.++++.|.+ +.++ +.+.+++.+.+......++..+....+++.+++++|. + ++++|+|+++++.
T Consensus 30 ~g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~~--~---~v~~t~~gt~A~~ 103 (467)
T 2oqx_A 30 SGMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGY--Q---YTIPTHQGRGAEQ 103 (467)
T ss_dssp TTSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHCC--S---EEEEEC--CCSHH
T ss_pred cCCCceeccCCCeeEecccCCCc-HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhCc--C---cEEEcCCcHHHHH
Confidence 3444555555543 2333 5667777776543222233223333444555555554 2 7999999999999
Q ss_pred HHHHHhccC-----C----CeEEEcCCCcHHHHHHHHHcCCEEEEecCC----CC----CCcccCHHHHHHHhhc----C
Q 043334 687 KLVLCCILE-----G----GTLCFPAGSNGNYVSAARFLKANIVNIPTE----SE----VGFKMTEKTLVTILET----V 745 (903)
Q Consensus 687 ~ll~~l~~p-----G----D~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~----~~----~~f~ld~~~L~~~l~~----~ 745 (903)
.++.+++++ | |.|++..+.|..+.......|+.++..... .. .++.+|+++|++++++ +
T Consensus 104 ~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~ 183 (467)
T 2oqx_A 104 IYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNN 183 (467)
T ss_dssp HHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGG
T ss_pred HHHHHHhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCc
Confidence 999999988 9 998888666677777777888887764221 11 2456899999999974 4
Q ss_pred CCcEEEEECCCCCCc-ccCCCHHHHHHHHHHHHhCCcEEEEecCCCC----------CccCCCCCCCCchhhhhhhhccC
Q 043334 746 KKPWVYISGPTINPT-GLLYSNKEIENILTVCAKYGARVVIDTAFSG----------LEFNYEGWGGWDLEGCLSKLYSS 814 (903)
Q Consensus 746 ~~~~vil~~P~~NPT-G~v~s~eel~eI~~ia~k~~i~VI~DeaY~~----------l~f~~~~~s~~s~~~~~~~l~~~ 814 (903)
+ ++|++++|+ ||| |.+++.+++++|.++|++||++||+|+++.. ..+.+.. ...+....-..
T Consensus 184 ~-~~vi~~~~~-n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~-----~~~~~~~~~~~ 256 (467)
T 2oqx_A 184 V-PYIVATITS-NSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWT-----IEQITRETYKY 256 (467)
T ss_dssp C-CCEEEESSB-CGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSC-----HHHHHHHHGGG
T ss_pred e-eEEEEeccc-cCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCcc-----HHHHhhhhhcc
Confidence 5 589999997 998 9999999999999999999999999965532 1233321 11111000011
Q ss_pred CCCCCceEEEccCchhcccc-cceeeEEEeCcH---HHHHHHH
Q 043334 815 TNSSFNVSLLGGLSLKMLTG-ALKFGFLVLNHP---QLVDAFS 853 (903)
Q Consensus 815 ~~~~~~vI~l~S~SK~~g~~-GlRiG~lv~~~~---~li~~l~ 853 (903)
. + +++.|+||.+|+| | ||++++++ +.++.+.
T Consensus 257 ~---d--~~~~s~sK~~g~~~G---g~~~~~~~~~~~~~~~~~ 291 (467)
T 2oqx_A 257 A---D--MLAMSAKKDAMVPMG---GLLCMKDDSFFDVYTECR 291 (467)
T ss_dssp C---S--EEEEESSSTTCCSSC---EEEEECSGGGHHHHHHHH
T ss_pred C---C--eEEEecccccCCCCc---eEEEecChhHHHHHHHHH
Confidence 1 2 4578999999877 5 78888754 3444444
No 214
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.66 E-value=3e-15 Score=174.48 Aligned_cols=202 Identities=12% Similarity=0.118 Sum_probs=150.0
Q ss_pred CcHHHHHHHHHHHHccCCC----CCchHHHHHHHHHHHhhcCCCCC------CCCcEEecCchHHHHHHHHHHhccC---
Q 043334 629 IPSLVKAAIFESFARQNMS----ESEIDVTPSIQQYIKSNFGFPID------INAEFIYADCSQSLFNKLVLCCILE--- 695 (903)
Q Consensus 629 ~p~~v~~al~~al~~y~~~----~G~~~lr~ala~~l~~~~G~~~~------pe~~I~vt~Gs~~al~~ll~~l~~p--- 695 (903)
++..+.+.+...+..+... .+..++.+++++++++.+|.+.+ +..++++|+|+++++..++.+..++
T Consensus 86 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~ 165 (486)
T 1js3_A 86 YPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR 165 (486)
T ss_dssp HHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence 3445666676666443222 22457788999999999998752 1126899999999988877665431
Q ss_pred ------CC--------e--EEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCC-----cEEEEEC
Q 043334 696 ------GG--------T--LCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKK-----PWVYISG 754 (903)
Q Consensus 696 ------GD--------~--Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~-----~~vil~~ 754 (903)
|| . |+++.++|..+...++..|++++.+|++ +++.+|+++|+++++++++ .+|++++
T Consensus 166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~ 243 (486)
T 1js3_A 166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATL 243 (486)
T ss_dssp HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeC
Confidence 43 3 8889999999999999999999999986 4688999999999976542 2899999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc
Q 043334 755 PTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG 834 (903)
Q Consensus 755 P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~ 834 (903)
|+ ||||.+-+ +++|.++|+++|+++++|++|+...+..+.. ...+..+.. ...+..|++|.+++|
T Consensus 244 ~~-n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~-----~~~~~g~~~------adsi~~~~hK~~~~p 308 (486)
T 1js3_A 244 GT-TSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEF-----RHLLNGVEF------ADSFNFNPHKWLLVN 308 (486)
T ss_dssp SC-TTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTT-----GGGGTTGGG------CSEEEECHHHHSSCC
T ss_pred CC-CCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHH-----HHHhcCccc------cCeeEEchhhhcCCC
Confidence 98 99998855 9999999999999999999998655433221 011122222 234557899999866
Q ss_pred cceeeEEEeCcHHH
Q 043334 835 ALKFGFLVLNHPQL 848 (903)
Q Consensus 835 GlRiG~lv~~~~~l 848 (903)
+++||++++++.+
T Consensus 309 -~~~G~l~~~~~~~ 321 (486)
T 1js3_A 309 -FDCSAMWVKRRTD 321 (486)
T ss_dssp -SSCEEEEESCHHH
T ss_pred -cceEEEEEeCHHH
Confidence 8999999987643
No 215
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.64 E-value=1.2e-15 Score=163.64 Aligned_cols=197 Identities=16% Similarity=0.122 Sum_probs=126.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh---cccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYL---NALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~---~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
++.+|||+|||+|.+++.++++.++.+|+|+|+++.+++.|++|+.. +++ .++++++++|+.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l---------------~~~v~~~~~D~~ 100 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF---------------SARIEVLEADVT 100 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT---------------GGGEEEEECCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC---------------cceEEEEeCCHH
Confidence 56799999999999999999998888999999999999999999987 766 247999999998
Q ss_pred cccc------CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcc
Q 043334 107 AYCR------DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVI 180 (903)
Q Consensus 107 ~~~~------~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~L 180 (903)
+... ...++||+|++||||..... ........ ..+.. .+...+..+++.+.++|
T Consensus 101 ~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~--~~~~~~~~------------~~a~~------~~~~~~~~~l~~~~~~L 160 (260)
T 2ozv_A 101 LRAKARVEAGLPDEHFHHVIMNPPYNDAGD--RRTPDALK------------AEAHA------MTEGLFEDWIRTASAIM 160 (260)
T ss_dssp CCHHHHHHTTCCTTCEEEEEECCCC-----------------------------------------CCHHHHHHHHHHHE
T ss_pred HHhhhhhhhccCCCCcCEEEECCCCcCCCC--CCCcCHHH------------HHHhh------cCcCCHHHHHHHHHHHc
Confidence 8732 11248999999999996531 11111100 00000 01111458899999999
Q ss_pred cCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeeccCCcceeEEecccCCCcccH
Q 043334 181 KPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEKNSPHRFEFFMGLSGDLPICA 260 (903)
Q Consensus 181 kpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~~~~~~f~f~~~~~~~~p~~~ 260 (903)
||||.+++.++.....+. .+.+++. |...++...+-. . .......+++..++....
T Consensus 161 kpgG~l~~~~~~~~~~~~-~~~l~~~-~~~~~i~~v~~~-~------~~~~~~~lv~~~k~~~~~--------------- 216 (260)
T 2ozv_A 161 VSGGQLSLISRPQSVAEI-IAACGSR-FGGLEITLIHPR-P------GEDAVRMLVTAIKGSRAR--------------- 216 (260)
T ss_dssp EEEEEEEEEECGGGHHHH-HHHHTTT-EEEEEEEEEESS-T------TSCCCEEEEEEEETCCCC---------------
T ss_pred CCCCEEEEEEcHHHHHHH-HHHHHhc-CCceEEEEEcCC-C------CCCceEEEEEEEeCCCCC---------------
Confidence 999999998877654444 4566654 776665432200 0 111223345555543222
Q ss_pred HHHHHhhhcCcceeeeeeeeecccc-CchhHHHHHH
Q 043334 261 RTAWAYGKAGGRISHALSVYSCQLH-QPNQVKKIFK 295 (903)
Q Consensus 261 ~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~ 295 (903)
..+.-.+.+++...+ ++.+++++.+
T Consensus 217 ----------~~~~~~l~i~~~~~~~yt~~~~~~~~ 242 (260)
T 2ozv_A 217 ----------LTFRAPLIMHETGSHAFTPFVDDLNN 242 (260)
T ss_dssp ----------CEECCCEESSCTTCCSCCHHHHHHHT
T ss_pred ----------ceecCCEEEECCCCCCCCHHHHHHHh
Confidence 234555777776666 7777777543
No 216
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.62 E-value=2.1e-14 Score=168.20 Aligned_cols=183 Identities=14% Similarity=0.107 Sum_probs=143.1
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc--------CC-----C-eEEEcCCCcHHHHHHHHH
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL--------EG-----G-TLCFPAGSNGNYVSAARF 715 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~--------pG-----D-~Vlv~~P~y~~~~~~~~~ 715 (903)
...+.+++.+++++.+|.+.+++ ++++|+|+++++..++.++.. +| + .|+++.++|+.+...++.
T Consensus 130 ~~~le~~~~~~la~~~g~~~~~~-~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~ 208 (504)
T 2okj_A 130 FVLMEQITLKKMREIVGWSSKDG-DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAA 208 (504)
T ss_dssp HHHHHHHHHHHHHHHHTCCSSSC-EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCC-CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHH
Confidence 34567888899999999874333 899999999999998888753 57 6 799999999999999999
Q ss_pred cCC---EEEEecCCCCCCcccCHHHHHHHhhcC-----CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEec
Q 043334 716 LKA---NIVNIPTESEVGFKMTEKTLVTILETV-----KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDT 787 (903)
Q Consensus 716 ~G~---~vv~v~~~~~~~f~ld~~~L~~~l~~~-----~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~De 787 (903)
.|. +++.+|++. ++.+|+++|++++++. ...+|++++|+ ||||.+.+ +++|.++|+++|+++++|+
T Consensus 209 ~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~-~~tG~i~~---l~~I~~la~~~g~~lhvD~ 282 (504)
T 2okj_A 209 LGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGT-TVYGAFDP---IQEIADICEKYNLWLHVDA 282 (504)
T ss_dssp TTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSC-SSSCCBCC---HHHHHHHHHHHTCEEEEEE
T ss_pred cCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCC-CCCCCcCC---HHHHHHHHHHcCCEEEEeh
Confidence 887 899999863 6889999999998752 23588999998 99999976 8899999999999999999
Q ss_pred CCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHH
Q 043334 788 AFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDA 851 (903)
Q Consensus 788 aY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~ 851 (903)
+|+...+..... ...+..+.. ..++..|++|.++.| .++|++++.++++++.
T Consensus 283 a~~~~~~~~~~~-----~~~~~g~~~------~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~ 334 (504)
T 2okj_A 283 AWGGGLLMSRKH-----RHKLNGIER------ANSVTWNPHKMMGVL-LQCSAILVKEKGILQG 334 (504)
T ss_dssp TTGGGGGGCTTT-----GGGGTTGGG------CSEEEECTTSTTCCC-SCCEEEEESSTTHHHH
T ss_pred hhhhHHHhCHhh-----HhhcCCccc------CCEEEECchhhcCCC-cceEEEEEECHHHHHH
Confidence 998765533221 011111111 346778999998865 6899999987545554
No 217
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.62 E-value=4.1e-15 Score=170.33 Aligned_cols=159 Identities=9% Similarity=0.047 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEe-cCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNI-PTE 726 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v-~~~ 726 (903)
+..+.+++.+++.+|.+ . .|++++| ++++..++.+++++||+|+++.|+|..+...+ +..|++++.+ +.+
T Consensus 58 ~~~~~l~~~la~~~g~~-~---~v~~~sG-t~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 132 (421)
T 2ctz_A 58 PTVDVLEKRLAALEGGK-A---ALATASG-HAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE 132 (421)
T ss_dssp HHHHHHHHHHHHHHTCS-E---EEEESSH-HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC
T ss_pred hHHHHHHHHHHHHhCCC-c---eEEecCH-HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC
Confidence 44566777777777764 2 5777777 88999999988999999999999999887765 7889999999 763
Q ss_pred CCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhh
Q 043334 727 SEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEG 806 (903)
Q Consensus 727 ~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~ 806 (903)
|++++++++++++ ++|++++|+ ||||.+++ +++|.++|+++|+++|+|++|..+.+.+..
T Consensus 133 -------d~~~l~~~i~~~~-~~v~~~~~~-n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~~~~-------- 192 (421)
T 2ctz_A 133 -------RPEEFLALTDEKT-RAWWVESIG-NPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYLLRP-------- 192 (421)
T ss_dssp -------CHHHHHHHCCTTE-EEEEEESSC-TTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSCCG--------
T ss_pred -------CHHHHHHhhccCC-eEEEEECCC-CCCCcccC---HHHHHHHHHHcCCEEEEECCcccccccCCc--------
Confidence 7899999998766 589999998 99999999 889999999999999999999223232221
Q ss_pred hhhhhccCCCCCCceEEEccCchhcccccceeeEEEeC
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLN 844 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~ 844 (903)
+. . +..+++.|+||.++.+|.|+|++++.
T Consensus 193 -~~----~----~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 193 -LA----W----GAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp -GG----G----TCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred -cc----c----CCeEEEECCcccccCCCCcEEEEEEe
Confidence 11 1 25689999999999999999998885
No 218
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.62 E-value=2.3e-15 Score=150.69 Aligned_cols=149 Identities=19% Similarity=0.268 Sum_probs=113.3
Q ss_pred CcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCC
Q 043334 6 SIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQP 85 (903)
Q Consensus 6 ~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~ 85 (903)
.||+|+..+..+.+.+.... .++.+|||+|||+|.+++.+++. + +|+|+|+|+.|++. .
T Consensus 2 ~v~~P~~~~~~l~~~l~~~~---~~~~~vLD~GcG~G~~~~~l~~~--~-~v~gvD~s~~~~~~---------~------ 60 (170)
T 3q87_B 2 DWYEPGEDTYTLMDALEREG---LEMKIVLDLGTSTGVITEQLRKR--N-TVVSTDLNIRALES---------H------ 60 (170)
T ss_dssp CSCCCCHHHHHHHHHHHHHT---CCSCEEEEETCTTCHHHHHHTTT--S-EEEEEESCHHHHHT---------C------
T ss_pred cccCcCccHHHHHHHHHhhc---CCCCeEEEeccCccHHHHHHHhc--C-cEEEEECCHHHHhc---------c------
Confidence 47999988877777766522 24679999999999999999987 3 99999999999988 1
Q ss_pred cchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccccccccc
Q 043334 86 IYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFG 165 (903)
Q Consensus 86 ~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g 165 (903)
.+++++++|+.+.... ++||+|++||||...++... +..+.++
T Consensus 61 ----------~~~~~~~~d~~~~~~~--~~fD~i~~n~~~~~~~~~~~-------------------------~~~~~~~ 103 (170)
T 3q87_B 61 ----------RGGNLVRADLLCSINQ--ESVDVVVFNPPYVPDTDDPI-------------------------IGGGYLG 103 (170)
T ss_dssp ----------SSSCEEECSTTTTBCG--GGCSEEEECCCCBTTCCCTT-------------------------TBCCGGG
T ss_pred ----------cCCeEEECChhhhccc--CCCCEEEECCCCccCCcccc-------------------------ccCCcch
Confidence 3688999999885443 48999999999997655321 0112233
Q ss_pred HHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 166 LGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 166 ~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
. .+++++.+.| |||.+++..........+.+++++.||+...+....
T Consensus 104 ~----~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~ 150 (170)
T 3q87_B 104 R----EVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRK 150 (170)
T ss_dssp C----HHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred H----HHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeec
Confidence 3 3455566666 999999987766667777889999999988875443
No 219
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.62 E-value=3.1e-14 Score=167.25 Aligned_cols=204 Identities=13% Similarity=0.078 Sum_probs=154.6
Q ss_pred cHHHHHHHHHHHHcc----CCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhcc-----------
Q 043334 630 PSLVKAAIFESFARQ----NMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCIL----------- 694 (903)
Q Consensus 630 p~~v~~al~~al~~y----~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~----------- 694 (903)
+..+.+.+..++..+ ....+..++.+++++|+++.+|.+.+++ .+++|+|+++++..++.++.+
T Consensus 109 ~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~ 187 (511)
T 3vp6_A 109 IGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDG-DGIFSPGGAISNMYSIMAARYKYFPEVKTKGM 187 (511)
T ss_dssp HHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSC-EEEEESSHHHHHHHHHHHHHHHHCTHHHHHCG
T ss_pred HHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCC-ceEECCchHHHHHHHHHHHHHHhhhhhhhcCc
Confidence 334456666666542 2234456788999999999999986544 799999999998887777655
Q ss_pred ---CCCeEEEcCCCcHHHHHHHHHcCC---EEEEecCCCCCCcccCHHHHHHHhhcCC-----CcEEEEECCCCCCcccC
Q 043334 695 ---EGGTLCFPAGSNGNYVSAARFLKA---NIVNIPTESEVGFKMTEKTLVTILETVK-----KPWVYISGPTINPTGLL 763 (903)
Q Consensus 695 ---pGD~Vlv~~P~y~~~~~~~~~~G~---~vv~v~~~~~~~f~ld~~~L~~~l~~~~-----~~~vil~~P~~NPTG~v 763 (903)
+++.|+++.++|..+...++..|. +++.++++. ++.+|+++|++++++.. ..+|++++|+ ||||.+
T Consensus 188 ~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~-~~~G~v 264 (511)
T 3vp6_A 188 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGT-TVYGAF 264 (511)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSC-SSSCCB
T ss_pred ccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcEEEEEecCC-CCCccc
Confidence 577999999999999999999998 999999864 57899999999997641 3589999998 999999
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEe
Q 043334 764 YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVL 843 (903)
Q Consensus 764 ~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~ 843 (903)
-+ +++|.++|++||+++++|++|+........+ ...+.... ...+++.+.+|.++.| ..+|++++
T Consensus 265 d~---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~-----~~~~~g~~------~aDsv~~~~hK~l~~p-~g~g~l~~ 329 (511)
T 3vp6_A 265 DP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKH-----RHKLNGIE------RANSVTWNPHKMMGVL-LQCSAILV 329 (511)
T ss_dssp CC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTT-----GGGGTTGG------GCSEEEECTTSTTCCC-SCCEEEEE
T ss_pred cc---HHHHHHHHHHcCCEEEEEccchhhHhhChhh-----hhhccCCc------cCCEEEECcccccCCC-cCeEEEEE
Confidence 55 8999999999999999999997644432221 01111111 1356778999998765 67899998
Q ss_pred CcHHHHHHH
Q 043334 844 NHPQLVDAF 852 (903)
Q Consensus 844 ~~~~li~~l 852 (903)
.++.+.+..
T Consensus 330 ~~~~~~~~~ 338 (511)
T 3vp6_A 330 KEKGILQGC 338 (511)
T ss_dssp SSTTHHHHH
T ss_pred eCHHHHHHH
Confidence 876555554
No 220
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.62 E-value=8.5e-15 Score=171.64 Aligned_cols=201 Identities=13% Similarity=0.094 Sum_probs=153.2
Q ss_pred CCcHHHHHHHHHHHHccCC----CCCchHHHHHHHHHHHhhcCCCCCCCCcEE---ecCchHHHHHHHHHHhccC-----
Q 043334 628 PIPSLVKAAIFESFARQNM----SESEIDVTPSIQQYIKSNFGFPIDINAEFI---YADCSQSLFNKLVLCCILE----- 695 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~~----~~G~~~lr~ala~~l~~~~G~~~~pe~~I~---vt~Gs~~al~~ll~~l~~p----- 695 (903)
.+++.+.+++.+++..... ..+..++.+.+++++++.+|.+.+++ ++. +|+|+++++..++.++..+
T Consensus 67 ~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~-~~~~g~~t~ggtea~~~a~~a~~~~~~~~~ 145 (502)
T 3hbx_A 67 WMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEA-ETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (502)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSS-CCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccc-cCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence 4577788888887654322 12345677889999999999985444 443 4899999999888887765
Q ss_pred ---CC-----eEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHH
Q 043334 696 ---GG-----TLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNK 767 (903)
Q Consensus 696 ---GD-----~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~e 767 (903)
|| .|+++.++|..+...++..|++++.+|+++ ++|.+|++++++++++++ ++|++++|+ ||||.+.+
T Consensus 146 ~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~t-~~v~~~~~~-n~tG~~~~-- 220 (502)
T 3hbx_A 146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDENT-ICVAAILGS-TLNGEFED-- 220 (502)
T ss_dssp HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCTTE-EEEEEEBSC-TTTCCBCC--
T ss_pred HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhhCC-EEEEEecCC-CCCCcccC--
Confidence 87 999999999999999999999999999864 458899999999998876 589999999 99999987
Q ss_pred HHHHHHHHHHhC------CcEEEEecCCCCCc--c-CCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccccee
Q 043334 768 EIENILTVCAKY------GARVVIDTAFSGLE--F-NYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKF 838 (903)
Q Consensus 768 el~eI~~ia~k~------~i~VI~DeaY~~l~--f-~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRi 838 (903)
+++|.++|+++ |+++++|++|+++. | .+... +. +. .. .-.++..|.+|.+ +++.++
T Consensus 221 -l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~--~~----~~-~~------~~D~v~~s~hK~l-~~p~g~ 285 (502)
T 3hbx_A 221 -VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WD----FR-LP------LVKSINVSGHKYG-LVYAGI 285 (502)
T ss_dssp -HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC--CS----TT-ST------TEEEEEEETTTTT-CCCSSC
T ss_pred -HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccc--cc----cC-CC------CceEEEECccccc-CCCCCe
Confidence 77788888888 99999999997543 1 11110 11 11 11 2456777888865 577889
Q ss_pred eEEEeCcHHHH
Q 043334 839 GFLVLNHPQLV 849 (903)
Q Consensus 839 G~lv~~~~~li 849 (903)
||+++.+...+
T Consensus 286 G~~~~~~~~~l 296 (502)
T 3hbx_A 286 GWVIWRNKEDL 296 (502)
T ss_dssp EEEEESSGGGS
T ss_pred EEEEEeCHHHh
Confidence 99988765343
No 221
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.61 E-value=2.7e-14 Score=161.03 Aligned_cols=201 Identities=11% Similarity=0.062 Sum_probs=134.7
Q ss_pred eEEccCCCCCCCCcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh----
Q 043334 617 LIHMDVDQSFLPIPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC---- 692 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l---- 692 (903)
+|++..+.+. .++.+++++.+.+...... ..+..+.+++.+++++|.+ . .|++++|+ +++..++.++
T Consensus 3 ~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~-~---~i~~~sGt-~a~~~al~~~~~~~ 73 (390)
T 3b8x_A 3 MINYPLASST--WDDLEYKAIQSVLDSKMFT--MGEYVKQYETQFAKTFGSK-Y---AVMVSSGS-TANLLMIAALFFTK 73 (390)
T ss_dssp --CBCSCCCC--CCHHHHHHHHHHHHHTCCS--SCHHHHHHHHHHHHHHTCS-E---EEEESCHH-HHHHHHHHHTTSSS
T ss_pred ceeccCCCCC--CCHHHHHHHHHHHHcCCCC--CChHHHHHHHHHHHHHCCC-c---EEEECCHH-HHHHHHHHHHHhhh
Confidence 3444444433 4677888888887642221 1223344444555555654 2 45555555 6888889888
Q ss_pred ---ccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHH
Q 043334 693 ---ILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEI 769 (903)
Q Consensus 693 ---~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel 769 (903)
+++||+|+++.|+|..+...++..|++++.++++++ +|.+|++++++.+++++ ++|++++ ++|... ++
T Consensus 74 ~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~-~~v~~~~----~~g~~~---~~ 144 (390)
T 3b8x_A 74 KPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDST-KAILTVN----LLGNPN---NF 144 (390)
T ss_dssp SCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTE-EEEEEEC----GGGCCC---CH
T ss_pred hcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCC-eEEEEEC----CccChh---hH
Confidence 889999999999999999999999999999999753 57899999999998765 4777774 345444 48
Q ss_pred HHHHHHHHhCCcEEEEecCCCC-CccCCCCCCCCchhhhhhhhccCCCCCCceEEEc--cCchhcccccceeeEEEeCcH
Q 043334 770 ENILTVCAKYGARVVIDTAFSG-LEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLG--GLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 770 ~eI~~ia~k~~i~VI~DeaY~~-l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~--S~SK~~g~~GlRiG~lv~~~~ 846 (903)
++|.++|+++|+++|+|++|+. ..+++.. ++. ..++... ..+|.++ +| +.|+++++++
T Consensus 145 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~~------------~g~-----~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~ 205 (390)
T 3b8x_A 145 DEINKIIGGRDIILLEDNCESMGATFNNKC------------AGT-----FGLMGTFSSFYSNHIA-TM-EGGCIVTDDE 205 (390)
T ss_dssp HHHHHHHTTSCCEEEEECTTCTTCEETTEE------------TTS-----SSSEEEEECCTTSSSC-SS-SCEEEEESCH
T ss_pred HHHHHHHHHcCCEEEEECcCcccCEECCcc------------ccc-----ccceEEEEccCCCCCc-cC-CceEEEeCCH
Confidence 9999999999999999999973 3332211 111 1122222 2345553 23 4599999875
Q ss_pred HHHHHHHh
Q 043334 847 QLVDAFSS 854 (903)
Q Consensus 847 ~li~~l~~ 854 (903)
++.+.+..
T Consensus 206 ~l~~~~~~ 213 (390)
T 3b8x_A 206 EIYHILLC 213 (390)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 47665543
No 222
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.61 E-value=2.4e-15 Score=173.68 Aligned_cols=167 Identities=12% Similarity=0.067 Sum_probs=126.1
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCC--
Q 043334 653 VTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVG-- 730 (903)
Q Consensus 653 lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~-- 730 (903)
..+.+++++++ +|.+ + ++++|+|+++++..++.+++++||.|+++.|+|..+...+...|++++.++...+++
T Consensus 58 ~~~~~~~~la~-~g~~-~---~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~ 132 (446)
T 2x3l_A 58 VILKSMKQVEK-HSDY-D---GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLTN 132 (446)
T ss_dssp HHHHHHHHHCS-CTTE-E---EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTS
T ss_pred HHHHHHHHHHh-cCCC-c---eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccC
Confidence 44667777777 7865 2 799999999999999999999999999999999999999999999999998832222
Q ss_pred --cccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCC-CccCCCCCCCCchhhh
Q 043334 731 --FKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSG-LEFNYEGWGGWDLEGC 807 (903)
Q Consensus 731 --f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~-l~f~~~~~s~~s~~~~ 807 (903)
+.+|++++ +.+++ +++++++| ||||.+++ +++|.++|+++|++||+||+|+. +.|.+.+ .+ .
T Consensus 133 ~~~~~d~~~l---~~~~~-~~v~~~~~--n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~~---~~---~ 197 (446)
T 2x3l_A 133 HYNKVNLSRL---NNDGH-KLVVLTYP--NYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGFP---DS---T 197 (446)
T ss_dssp SEEEEEC----------C-CEEEEESS--CTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTSC---CC---G
T ss_pred cCCCCCHHHH---cCCCc-eEEEEECC--CCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCCC---CC---h
Confidence 56788877 34455 58889985 56999998 78999999999999999999985 4455431 11 1
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHH
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLV 849 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li 849 (903)
.. + +..+++.|+||.++ ++.++||++++++ ++
T Consensus 198 ~~-~-------g~Di~~~S~~K~l~-~~~g~g~l~~~~~-~i 229 (446)
T 2x3l_A 198 LN-Y-------QADYVVQSFHKTLP-ALTMGSVLYIHKN-AP 229 (446)
T ss_dssp GG-G-------TCSEEEECHHHHSS-SCTTCEEEEEETT-CT
T ss_pred HH-c-------CCCEEEECCccccc-cccccEEEEEcCC-cC
Confidence 11 1 13489999999653 3345899999876 43
No 223
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.59 E-value=1.3e-14 Score=150.44 Aligned_cols=141 Identities=12% Similarity=0.149 Sum_probs=107.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++..|+.+|+|+|+|+.+++.|++|+..+++ +++.++++|+.++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~----------------~~v~~~~~d~~~~~ 104 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV----------------PNIKLLWVDGSDLT 104 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----------------SSEEEEECCSSCGG
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC----------------CCEEEEeCCHHHHH
Confidence 46799999999999999999998889999999999999999999988876 48999999998854
Q ss_pred c-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 R-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ...++||+|++|+|..... . .+.... ..+..+++++.++|+|||.+++
T Consensus 105 ~~~~~~~~D~i~~~~~~~~~~----~-----~~~~~~---------------------~~~~~~l~~~~~~LkpgG~l~~ 154 (214)
T 1yzh_A 105 DYFEDGEIDRLYLNFSDPWPK----K-----RHEKRR---------------------LTYKTFLDTFKRILPENGEIHF 154 (214)
T ss_dssp GTSCTTCCSEEEEESCCCCCS----G-----GGGGGS---------------------TTSHHHHHHHHHHSCTTCEEEE
T ss_pred hhcCCCCCCEEEEECCCCccc----c-----chhhhc---------------------cCCHHHHHHHHHHcCCCcEEEE
Confidence 1 1223899999997632110 0 000000 0123789999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
.+........+.+.+++.||.......+
T Consensus 155 ~~~~~~~~~~~~~~~~~~g~~~~~~~~d 182 (214)
T 1yzh_A 155 KTDNRGLFEYSLVSFSQYGMKLNGVWLD 182 (214)
T ss_dssp EESCHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EeCCHHHHHHHHHHHHHCCCeeeecccc
Confidence 8865444455567888899998777543
No 224
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.58 E-value=1.3e-14 Score=166.76 Aligned_cols=199 Identities=16% Similarity=0.105 Sum_probs=140.3
Q ss_pred eEEccCCCCCCCCcHHHHHHH--HHHHHccCC-----CCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchH---HHHH
Q 043334 617 LIHMDVDQSFLPIPSLVKAAI--FESFARQNM-----SESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQ---SLFN 686 (903)
Q Consensus 617 ~IdLs~g~p~~~~p~~v~~al--~~al~~y~~-----~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~---~al~ 686 (903)
...++.|.++...|+.+.+.+ ...+..|.+ ..|..++.+++++.+++.+|.+.. ++++++|++ +++.
T Consensus 66 ~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~---~i~~~~g~taa~ea~~ 142 (438)
T 1wyu_A 66 KAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIA---NASMYDGATALAEGVL 142 (438)
T ss_dssp TCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEE---CSCBSSHHHHHHHHHH
T ss_pred ccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhhhhHHHHHHHHHHHHHHHhCCCcc---ceEEeCcHHHHHHHHH
Confidence 457778888877787775554 333455543 345667788999999999998644 799999999 4444
Q ss_pred HHHHHhccCCCeEEEcCCCcHHHHHHH----HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCccc
Q 043334 687 KLVLCCILEGGTLCFPAGSNGNYVSAA----RFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGL 762 (903)
Q Consensus 687 ~ll~~l~~pGD~Vlv~~P~y~~~~~~~----~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~ 762 (903)
+++ .+++||+|+++.|+|+.+...+ +..|++++.++. + ++.+|+++ +++++ ++|++++| ||||.
T Consensus 143 ~a~--~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~--~~~~d~~~----i~~~t-~~v~i~~p--n~tG~ 210 (438)
T 1wyu_A 143 LAL--RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-E--GGRTPLPE----VGEEV-GAVVVQNP--NFLGA 210 (438)
T ss_dssp HHH--HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-B--TTBCCCCC----CCTTE-EEEEEESS--CTTSB
T ss_pred HHH--hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-c--CCccCHHH----hCCCe-EEEEEECC--CCCeE
Confidence 332 3579999999999999988655 458999999997 2 34677665 55555 58999997 89999
Q ss_pred CCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhc----cccccee
Q 043334 763 LYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKM----LTGALKF 838 (903)
Q Consensus 763 v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~----g~~GlRi 838 (903)
+.+ +++|.++|+++|+++|+|-.- ..++.... + ..+ +..+++.| ||.| ++.|.|+
T Consensus 211 ~~~---l~~i~~la~~~g~~vivd~d~--~a~g~~~~------~--~~~-------g~D~~~~s-~kk~~~~~~~~Gp~~ 269 (438)
T 1wyu_A 211 LED---LGPFAEAAHGAGALFVAVADP--LSLGVLKP------P--GAY-------GADIAVGD-GQSLGLPMGFGGPHF 269 (438)
T ss_dssp CCC---HHHHHHHHHHTTCEEEEECCT--TGGGTBCC------H--HHH-------TCSEEEEE-CTTTTCCCGGGCSCC
T ss_pred Eec---HHHHHHHHHHcCCEEEEEech--hhccCcCC------C--ccC-------CCCEEEEC-CcccCCCccCCCCCe
Confidence 986 889999999999999966221 11221110 1 111 12355555 6665 4667899
Q ss_pred eEEEeCcHHHHHHH
Q 043334 839 GFLVLNHPQLVDAF 852 (903)
Q Consensus 839 G~lv~~~~~li~~l 852 (903)
||++++++ +++.+
T Consensus 270 G~l~~~~~-~~~~l 282 (438)
T 1wyu_A 270 GFLATKKA-FVRQL 282 (438)
T ss_dssp EEEEECGG-GGGGC
T ss_pred eEEEEcHH-HHHhC
Confidence 99999887 66554
No 225
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.57 E-value=1.5e-13 Score=154.73 Aligned_cols=177 Identities=14% Similarity=0.112 Sum_probs=135.7
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHH--HHHHHcC--CEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYV--SAARFLK--ANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~--~~~~~~G--~~vv~v~~~ 726 (903)
.++.+++++.+++.+|.+ + .|++|+|+++++..++. ++.+||+|++++++|..+. ..++..| .+++.++.+
T Consensus 34 ~~~~~~~~~~l~~~~~~~-~---~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 108 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYNAE-A---AVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAE 108 (379)
T ss_dssp HHHHHHHHHHHHHHHTCS-E---EEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECE
T ss_pred HHHHHHHHHHHHHHhCCC-C---EEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecc
Confidence 356677888888888876 3 79999999999998775 4579999999999998753 3455556 488888764
Q ss_pred CC------CCc-ccCHHHHHHHhhc-CCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCC
Q 043334 727 SE------VGF-KMTEKTLVTILET-VKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEG 798 (903)
Q Consensus 727 ~~------~~f-~ld~~~L~~~l~~-~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~ 798 (903)
.. ..| .+|++++++.+++ ++ ++|++++++ ||||.+++.+++++|.++|+++|+++|+|++++ ++..
T Consensus 109 ~~g~~~~~~~~~~~d~~~l~~~i~~~~~-~~v~~~~~~-~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~----g~~~ 182 (379)
T 3ke3_A 109 RTEDTEAPKPFAPVDIETAVAKIKEDKS-AIVYAPHVE-TSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS----GCVW 182 (379)
T ss_dssp ESSCCSSCCCEECCCHHHHHHHHHHHTC-SEEEEESEE-TTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC----TTCC
T ss_pred ccccccccCCCCCCCHHHHHHHHhhcCC-cEEEEEeec-CCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc----CCcc
Confidence 31 112 4799999999964 55 588899887 999999999999999999999999999999974 2222
Q ss_pred CCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHh
Q 043334 799 WGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSS 854 (903)
Q Consensus 799 ~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~ 854 (903)
.. +... +..+++.|++|.++. +..+|+++++++ +++.+..
T Consensus 183 ---~~----~~~~-------~~d~~~~s~~K~l~~-~~g~g~~~~~~~-~~~~l~~ 222 (379)
T 3ke3_A 183 ---LD----MKEL-------GIDVLISAPQKGWSS-TPCAGLVMLSAA-AIKKVES 222 (379)
T ss_dssp ---CC----HHHH-------TCSEEEECTTTTTCS-CCCEEEEEECHH-HHHHHHT
T ss_pred ---cc----cccc-------CCCEEEecchhhcCC-CCceEEEEECHH-HHHhhhc
Confidence 11 1111 246889999998864 345899999987 8887764
No 226
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.57 E-value=1.1e-14 Score=169.73 Aligned_cols=224 Identities=7% Similarity=-0.022 Sum_probs=136.2
Q ss_pred hccCCCCHHHHHHHHhhhhccCCCCCeEEccCCCCCCCCcHHHHHHHHHHHHc-cCCC-------CCc---hHHHHHHHH
Q 043334 591 MIGFSRSAISVLNSAELSITETPNSGLIHMDVDQSFLPIPSLVKAAIFESFAR-QNMS-------ESE---IDVTPSIQQ 659 (903)
Q Consensus 591 ~~~l~~s~i~~l~~a~~a~~~~~~~~~IdLs~g~p~~~~p~~v~~al~~al~~-y~~~-------~G~---~~lr~ala~ 659 (903)
+..+.+..+..+..... ...+.|.|-.+++. +++.+++++...+.. |... .|. ..+.+..++
T Consensus 35 l~~~d~~~~~~~~~e~~-----rq~~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~ 107 (490)
T 2a7v_A 35 LSDSDPEMWELLQREKD-----RQCRGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQR 107 (490)
T ss_dssp HHHHCHHHHHHHHHHHH-----HHHHSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHHH-----HHHcCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHH
Confidence 34444455555553221 11256777776554 689999998887643 3211 122 244555668
Q ss_pred HHHhhcCCCCCCCC-cEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHH--------HHHHcCCE--EEEecCCCC
Q 043334 660 YIKSNFGFPIDINA-EFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVS--------AARFLKAN--IVNIPTESE 728 (903)
Q Consensus 660 ~l~~~~G~~~~pe~-~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~--------~~~~~G~~--vv~v~~~~~ 728 (903)
++++.+|.+.+ +. -.+.++++++++..++.++++|||+|+++++.|.++.. .+...|.. ++++++++
T Consensus 108 ~~a~l~g~~~~-~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~- 185 (490)
T 2a7v_A 108 RALEAFDLDPA-QWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP- 185 (490)
T ss_dssp HHHHHTTCCTT-TEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-
T ss_pred HHHHHcCCCcc-cCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-
Confidence 99999998753 11 12344455778888899999999999999999876432 23345654 44555553
Q ss_pred CCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCC-CCccCCCCCCCCchhhh
Q 043334 729 VGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFS-GLEFNYEGWGGWDLEGC 807 (903)
Q Consensus 729 ~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~-~l~f~~~~~s~~s~~~~ 807 (903)
+++.+|++++++.+.+.+.++|+++.|+ ||+ ..+ +++|.++|+++|+++++|+++. ++.+.+... ..
T Consensus 186 ~~~~iD~d~le~~l~~~~~klIi~~~s~-~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~------~~ 253 (490)
T 2a7v_A 186 KTGLIDYNQLALTARLFRPRLIIAGTSA-YAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIP------SP 253 (490)
T ss_dssp TTCSBCHHHHHHHHHHHCCSEEEECCSS-CCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC------CG
T ss_pred ccCCcCHHHHHHHHhhcCCcEEEEcCCC-CCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCC------CC
Confidence 3578999999999864333588888887 986 334 8899999999999999999963 344444321 11
Q ss_pred hhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 808 LSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 808 ~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
+ .. ..+++.|+||+++ |.|.|++++++.
T Consensus 254 ~---~~------aDiv~~S~hK~l~--Gp~GG~i~~~~~ 281 (490)
T 2a7v_A 254 F---KH------ADIVTTTTHKTLR--GARSGLIFYRKG 281 (490)
T ss_dssp G---GT------CSEEEEESSGGGC--SCSCEEEEEECS
T ss_pred C---CC------CCEEEECCcccCc--cccchheeeccc
Confidence 1 11 3578999999884 788899999863
No 227
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.57 E-value=4.4e-14 Score=142.48 Aligned_cols=137 Identities=13% Similarity=0.082 Sum_probs=95.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.|++.|++|+..+++ ++++++++|...+.
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~----------------~~v~~~~~~~~~l~ 83 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGI----------------ENTELILDGHENLD 83 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTC----------------CCEEEEESCGGGGG
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC----------------CcEEEEeCcHHHHH
Confidence 6789999999999999999987 78999999999999999999988876 58999998887753
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|++|++|+...+..... ..+....+++++.++|||||.+++.
T Consensus 84 ~~~~~~fD~v~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 84 HYVREPIRAAIFNLGYLPSADKSVIT-----------------------------KPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp GTCCSCEEEEEEEEC----------------------------------------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccCCcCEEEEeCCCCCCcchhccc-----------------------------ChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 22234899999999887643221110 0111236789999999999999986
Q ss_pred eCCCC-----cHHHHHHHHHH---CCCeEEEE
Q 043334 190 MGGRP-----GQGVCKRLFER---RGFRVDKL 213 (903)
Q Consensus 190 ~~~~~-----~~~~l~~ll~~---~gf~~~~~ 213 (903)
..... ....+.+++.. .+|.+...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 166 (185)
T 3mti_A 135 IYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLY 166 (185)
T ss_dssp EC------CHHHHHHHHHHHHSCTTTEEEEEE
T ss_pred EeCCCCCCHHHHHHHHHHHHhCCCceEEEEEe
Confidence 54321 12333445544 34665554
No 228
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.56 E-value=1.7e-13 Score=161.04 Aligned_cols=181 Identities=16% Similarity=0.141 Sum_probs=142.0
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhc-------c-CCC------eEEEcCCCcHHHHHHHHH
Q 043334 650 EIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCI-------L-EGG------TLCFPAGSNGNYVSAARF 715 (903)
Q Consensus 650 ~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~-------~-pGD------~Vlv~~P~y~~~~~~~~~ 715 (903)
..++.+.+.+++++.+|.+.. ++++|+|+++++..++.++. + +|| .|+++.++|+.+...++.
T Consensus 146 ~~~le~~~~~~la~l~g~~~~---~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~ 222 (515)
T 2jis_A 146 FVLMEEEVLRKLRALVGWSSG---DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAF 222 (515)
T ss_dssp HHHHHHHHHHHHHHHHTCSSC---EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCC---CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHH
Confidence 456678889999999998733 89999999999888777763 2 576 899999999999999999
Q ss_pred cCC---EEEEecCCCCCCcccCHHHHHHHhhcC-----CCcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEec
Q 043334 716 LKA---NIVNIPTESEVGFKMTEKTLVTILETV-----KKPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDT 787 (903)
Q Consensus 716 ~G~---~vv~v~~~~~~~f~ld~~~L~~~l~~~-----~~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~De 787 (903)
.|. +++.+|+++ ++.+|+++|++++++. ...+|++++|+ ||||.+.+ +++|.++|+++|+++++|+
T Consensus 223 ~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~-n~tG~i~~---l~~I~~la~~~g~~l~vD~ 296 (515)
T 2jis_A 223 LGLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFLVSATSGT-TVLGAFDP---LEAIADVCQRHGLWLHVDA 296 (515)
T ss_dssp TTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSC-TTTCCBCC---HHHHHHHHHHHTCEEEEEE
T ss_pred cCCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCC-CCCCCccC---HHHHHHHHHHcCCeEEEeh
Confidence 988 999999863 5789999999998752 23589999998 99999987 8899999999999999999
Q ss_pred CCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH-HHHHH
Q 043334 788 AFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP-QLVDA 851 (903)
Q Consensus 788 aY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~-~li~~ 851 (903)
+|+...+..+.. ...+..+. ...+++.|++|.++.| .++|++++.++ .+++.
T Consensus 297 a~~~~~~~~~~~-----~~~~~g~~------~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~ 349 (515)
T 2jis_A 297 AWGGSVLLSQTH-----RHLLDGIQ------RADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKR 349 (515)
T ss_dssp TTGGGGGGCTTT-----GGGGTTGG------GCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHH
T ss_pred hhhhHHHhChhh-----HhhcCCCc------cCCEEEECcccccCCC-CCeeEEEEeChHHHHHH
Confidence 998766543321 01111111 2457889999998744 57999999875 45554
No 229
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.55 E-value=3e-14 Score=144.52 Aligned_cols=125 Identities=10% Similarity=0.096 Sum_probs=96.2
Q ss_pred hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhc
Q 043334 13 WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKK 92 (903)
Q Consensus 13 w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~ 92 (903)
+...+++.+....+ .++.+|||+|||+|.+++.++.. +..+|+|+|+|+.|++.|++|+..+++
T Consensus 29 ~~~~l~~~l~~~~~--~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~------------- 92 (189)
T 3p9n_A 29 VRESLFNIVTARRD--LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGL------------- 92 (189)
T ss_dssp HHHHHHHHHHHHSC--CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHHhccC--CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCC-------------
Confidence 33444555544221 36789999999999999987774 456899999999999999999988876
Q ss_pred ccCCcEEEEEccccccccC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHH
Q 043334 93 TLLDRVEFHESDLLAYCRD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIAR 171 (903)
Q Consensus 93 ~~~~~v~~~~gDl~~~~~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~ 171 (903)
++++++++|+.+.... ..++||+|++||||.... +.+..
T Consensus 93 ---~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~-------------------------------------~~~~~ 132 (189)
T 3p9n_A 93 ---SGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDS-------------------------------------ADVDA 132 (189)
T ss_dssp ---SCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCH-------------------------------------HHHHH
T ss_pred ---CceEEEEccHHHHHhhccCCCccEEEECCCCCcch-------------------------------------hhHHH
Confidence 4899999999887532 134899999999987421 11236
Q ss_pred HHHHHhh--cccCCcEEEEEeCCC
Q 043334 172 AVEEGIG--VIKPSGIMIFNMGGR 193 (903)
Q Consensus 172 ~l~~~~~--~LkpgG~ll~~~~~~ 193 (903)
+++.+.+ +|+|||.+++.....
T Consensus 133 ~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 133 ILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp HHHHHHHSSSCCTTCEEEEEEETT
T ss_pred HHHHHHhcCccCCCeEEEEEecCC
Confidence 7888888 999999999987653
No 230
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.55 E-value=3.2e-14 Score=147.70 Aligned_cols=141 Identities=12% Similarity=0.084 Sum_probs=105.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+|+..|+.+|+|+|+|+.|++.|++|+..+++ +++.++++|+.++.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~----------------~nv~~~~~d~~~l~ 101 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA----------------QNVKLLNIDADTLT 101 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC----------------SSEEEECCCGGGHH
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC----------------CCEEEEeCCHHHHH
Confidence 46799999999999999999998889999999999999999999988876 47999999998753
Q ss_pred c-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 R-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ...++||.|+.|.|.......+ .... + ....+++++.++|||||.+++
T Consensus 102 ~~~~~~~~d~v~~~~~~p~~~~~~----~~~r---------------l-----------~~~~~l~~~~~~LkpgG~l~~ 151 (213)
T 2fca_A 102 DVFEPGEVKRVYLNFSDPWPKKRH----EKRR---------------L-----------TYSHFLKKYEEVMGKGGSIHF 151 (213)
T ss_dssp HHCCTTSCCEEEEESCCCCCSGGG----GGGS---------------T-----------TSHHHHHHHHHHHTTSCEEEE
T ss_pred hhcCcCCcCEEEEECCCCCcCccc----cccc---------------c-----------CcHHHHHHHHHHcCCCCEEEE
Confidence 1 1123799998874421100000 0000 0 023789999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
.+........+.+.+.+.||.......+
T Consensus 152 ~td~~~~~~~~~~~~~~~g~~~~~~~~d 179 (213)
T 2fca_A 152 KTDNRGLFEYSLKSFSEYGLLLTYVSLD 179 (213)
T ss_dssp EESCHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EeCCHHHHHHHHHHHHHCCCcccccccc
Confidence 8865444445566788889987766433
No 231
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.55 E-value=3.1e-15 Score=157.19 Aligned_cols=206 Identities=18% Similarity=0.296 Sum_probs=126.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|+++...++ .+++++++|+.+..
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~-----------------~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN-----------------RHVDFWVQDMRELE 92 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT-----------------CCCEEEECCGGGCC
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC-----------------CceEEEEcChhhcC
Confidence 4689999999999999998876 799999999999999999986654 36899999998875
Q ss_pred cCCCCceeEEEECC-CCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RDHDIQLERIVGCI-PQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~~~~fD~Iv~Np-Py~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.. ++||+|+++. .... +. ..+....+++++.++|||||.+++
T Consensus 93 ~~--~~fD~v~~~~~~~~~------~~-----------------------------~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 93 LP--EPVDAITILCDSLNY------LQ-----------------------------TEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp CS--SCEEEEEECTTGGGG------CC-----------------------------SHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CC--CCcCEEEEeCCchhh------cC-----------------------------CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 44 4899999753 1111 10 011234789999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeeccCCcceeEEecccCCCcccHHHHHHhhh
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEKNSPHRFEFFMGLSGDLPICARTAWAYGK 268 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~~~~~~f~f~~~~~~~~p~~~~~~~~~~~ 268 (903)
.+... ..+.+++....|..........|.. .+..... . + .....++.. .
T Consensus 136 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~--~------~~~~~~~~~----------------~ 184 (243)
T 3d2l_A 136 DVHSP---YKMETLFNGKTYATHAEQSSYIWFA---DPGEEPL-S--V------VHELTFFIE----------------G 184 (243)
T ss_dssp EEECH---HHHHTTTSSEEEEEECSSEEEEEEE---EECSSTT-E--E------EEEEEEEEE----------------C
T ss_pred EcCCH---HHHHHhcCCcceeEECCCcEEEEEe---ecCcccc-E--E------EEEEEEEEE----------------c
Confidence 77553 2211122111110000000000000 0000000 0 0 000001100 0
Q ss_pred cCcceeeeeeeeeccccCchhHHHHHHHHh-ccccccccccccccccccccccccchHH
Q 043334 269 AGGRISHALSVYSCQLHQPNQVKKIFKFLK-NGFHEISSSLDLSFEDDSVADEKIPFLA 326 (903)
Q Consensus 269 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~-~g~~~~~~~~d~~~~~~~~~~~~~~~~~ 326 (903)
.++...+ +.+.+..+.+..+++.++|+ +||+.+..+.++...+....+.|+.+||
T Consensus 185 ~~~~~~~---~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va 240 (243)
T 3d2l_A 185 EDGRYDR---VDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVA 240 (243)
T ss_dssp TTSCEEE---EEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEE
T ss_pred CCCceEE---EEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEE
Confidence 0010000 11234446678899999999 9999999999999888777888887765
No 232
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.55 E-value=2e-14 Score=154.14 Aligned_cols=107 Identities=15% Similarity=0.194 Sum_probs=85.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW--LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~--~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
.++.+|||+|||+|..++.+++.+ ++.+|+|+|+|+.|++.|++++...+. ..+++++++|+.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~---------------~~~v~~~~~D~~ 133 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA---------------PTPVDVIEGDIR 133 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC---------------SSCEEEEESCTT
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc---------------CceEEEeecccc
Confidence 368899999999999999999875 467999999999999999999977665 358999999999
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+++.+ +||+|++|--.. .+.. .....++++++++|||||.+
T Consensus 134 ~~~~~---~~d~v~~~~~l~------~~~~------------------------------~~~~~~l~~i~~~LkpGG~l 174 (261)
T 4gek_A 134 DIAIE---NASMVVLNFTLQ------FLEP------------------------------SERQALLDKIYQGLNPGGAL 174 (261)
T ss_dssp TCCCC---SEEEEEEESCGG------GSCH------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred ccccc---ccccceeeeeee------ecCc------------------------------hhHhHHHHHHHHHcCCCcEE
Confidence 87543 699999752211 1111 11236899999999999999
Q ss_pred EEE
Q 043334 187 IFN 189 (903)
Q Consensus 187 l~~ 189 (903)
++.
T Consensus 175 ii~ 177 (261)
T 4gek_A 175 VLS 177 (261)
T ss_dssp EEE
T ss_pred EEE
Confidence 983
No 233
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.55 E-value=5.4e-14 Score=140.38 Aligned_cols=147 Identities=12% Similarity=0.001 Sum_probs=116.2
Q ss_pred CCcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCC
Q 043334 5 PSIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQ 84 (903)
Q Consensus 5 p~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~ 84 (903)
+|.+.++++...+++.+.. .++.+|||+|||+|.++..+++.+++.+|+|+|+|+.+++.|++|+..+++
T Consensus 5 ~g~~t~~~~~~~~~~~~~~-----~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----- 74 (178)
T 3hm2_A 5 DGQLTKQHVRALAISALAP-----KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV----- 74 (178)
T ss_dssp -CCSHHHHHHHHHHHHHCC-----CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC-----
T ss_pred CCcccHHHHHHHHHHHhcc-----cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC-----
Confidence 5666777777766666542 256899999999999999999988889999999999999999999988776
Q ss_pred CcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccc
Q 043334 85 PIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQF 164 (903)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~ 164 (903)
.+++ ++++|..+......++||+|+++.+...
T Consensus 75 ----------~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~------------------------------------- 106 (178)
T 3hm2_A 75 ----------SDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA------------------------------------- 106 (178)
T ss_dssp ----------TTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC-------------------------------------
T ss_pred ----------CCCE-EEecchHhhhhccCCCCCEEEECCcccH-------------------------------------
Confidence 2478 8889987654443248999997654431
Q ss_pred cHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 165 GLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 165 g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
..+++++.++|||||++++............+++++.|+......
T Consensus 107 -----~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 107 -----PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp -----TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred -----HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEEEE
Confidence 157899999999999999988776666777788999998877653
No 234
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.55 E-value=5.7e-14 Score=146.53 Aligned_cols=127 Identities=17% Similarity=0.266 Sum_probs=106.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.+++.+++..+..+|+|+|+|+.+++.|++|+..+|++ ++++++.+|.++.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~---------------~~i~~~~~d~l~~ 78 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK---------------EKIQVRLANGLAA 78 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT---------------TTEEEEECSGGGG
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---------------ceEEEEECchhhh
Confidence 4678999999999999999999877789999999999999999999999983 5899999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
....+ +||+|+. ...|-+++..+++++.+.|+++|++++
T Consensus 79 l~~~~-~~D~Ivi----------------------------------------aG~Gg~~i~~Il~~~~~~L~~~~~lVl 117 (225)
T 3kr9_A 79 FEETD-QVSVITI----------------------------------------AGMGGRLIARILEEGLGKLANVERLIL 117 (225)
T ss_dssp CCGGG-CCCEEEE----------------------------------------EEECHHHHHHHHHHTGGGCTTCCEEEE
T ss_pred cccCc-CCCEEEE----------------------------------------cCCChHHHHHHHHHHHHHhCCCCEEEE
Confidence 54321 6998872 012334566899999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
... .+...+++++.++||.+...
T Consensus 118 q~~--~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 118 QPN--NREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp EES--SCHHHHHHHHHHTTEEEEEE
T ss_pred ECC--CCHHHHHHHHHHCCCEEEEE
Confidence 765 46777889999999998775
No 235
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.55 E-value=8.3e-14 Score=162.83 Aligned_cols=204 Identities=12% Similarity=0.091 Sum_probs=148.8
Q ss_pred CCcHHHHHHHHHHHHccC-CCC----CchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHh----c-----
Q 043334 628 PIPSLVKAAIFESFARQN-MSE----SEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCC----I----- 693 (903)
Q Consensus 628 ~~p~~v~~al~~al~~y~-~~~----G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l----~----- 693 (903)
+.++.+.+++.......+ ..+ +..++.+.+++++++.+|.+.. + ++++|+|+++++..++.+. +
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~-~-~~~~t~ggt~a~~~al~~ar~~~~~~~~~ 188 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEK-A-DGIFTSGGTQSNQMGLMLARDWIADKLSG 188 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTT-C-EEEEESSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCC-C-CeEEcCCchHHHHHHHHHHHHHHHHhhcc
Confidence 356677776655443321 111 2345677889999999998631 2 8999999999998888773 3
Q ss_pred ----cC------CC-eEEEcCCCcHHHHHHHHHcCC---EEEEecCCCCCCcccCHHHHHHHhhcC----CC-cEEEEEC
Q 043334 694 ----LE------GG-TLCFPAGSNGNYVSAARFLKA---NIVNIPTESEVGFKMTEKTLVTILETV----KK-PWVYISG 754 (903)
Q Consensus 694 ----~p------GD-~Vlv~~P~y~~~~~~~~~~G~---~vv~v~~~~~~~f~ld~~~L~~~l~~~----~~-~~vil~~ 754 (903)
.+ || .|+++.++|..+...++..|. +++.+|++. ++.+|+++|++.+++. ++ .+|+++.
T Consensus 189 ~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~ 266 (497)
T 2qma_A 189 HSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGLIPFAIVGTA 266 (497)
T ss_dssp CCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTCEEEEEEEEB
T ss_pred cchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCCcceEEEEcC
Confidence 13 46 899999999999999999876 899999863 6789999999998753 22 2788888
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc
Q 043334 755 PTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG 834 (903)
Q Consensus 755 P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~ 834 (903)
|+ ||||.+.+ +++|.++|+++|+++++|++|+...+... . ...+..+. ...+++.|++|.++.|
T Consensus 267 ~~-~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~-----~~~~~gi~------~~D~i~~s~hK~l~~p 330 (497)
T 2qma_A 267 GT-TDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS-H-----KSRLKGVE------RAHSISVDFHKLFYQT 330 (497)
T ss_dssp SC-TTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST-T-----GGGGTTGG------GCSEEEEETTTTTCCC
T ss_pred CC-CCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc-c-----hHhhcCcc------cCCEEEEcchhccCCC
Confidence 98 99999876 88999999999999999999976654332 1 01111121 1346788999998766
Q ss_pred cceeeEEEeCcHHHHHHH
Q 043334 835 ALKFGFLVLNHPQLVDAF 852 (903)
Q Consensus 835 GlRiG~lv~~~~~li~~l 852 (903)
.++||+++.++..++.+
T Consensus 331 -~~~G~l~~~~~~~~~~~ 347 (497)
T 2qma_A 331 -ISCGALLVNDKSNFKFL 347 (497)
T ss_dssp -SSCEEEEESCGGGGGGG
T ss_pred -cceEEEEEeCHHHHHHh
Confidence 69999999876444433
No 236
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.55 E-value=1.2e-13 Score=141.73 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=103.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.+++.+++..+..+|+|+|+|+.+++.|++|+..+++ ++++++++|+.+.
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~~ 102 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA----------------RNVTLVEAFAPEG 102 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC----------------TTEEEEECCTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC----------------CcEEEEeCChhhh
Confidence 357899999999999999999998779999999999999999999988876 5899999999776
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... .+||+|+++.+.. . +..+++++.+.|||||++++
T Consensus 103 ~~~~-~~~D~i~~~~~~~------~-----------------------------------~~~~l~~~~~~LkpgG~l~~ 140 (204)
T 3e05_A 103 LDDL-PDPDRVFIGGSGG------M-----------------------------------LEEIIDAVDRRLKSEGVIVL 140 (204)
T ss_dssp CTTS-CCCSEEEESCCTT------C-----------------------------------HHHHHHHHHHHCCTTCEEEE
T ss_pred hhcC-CCCCEEEECCCCc------C-----------------------------------HHHHHHHHHHhcCCCeEEEE
Confidence 5443 3799999765442 0 22789999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCe
Q 043334 189 NMGGRPGQGVCKRLFERRGFR 209 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~ 209 (903)
..........+.+++++.||.
T Consensus 141 ~~~~~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 141 NAVTLDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp EECBHHHHHHHHHHHHHTTCE
T ss_pred EecccccHHHHHHHHHHCCCc
Confidence 877666667778899999993
No 237
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.54 E-value=4.6e-14 Score=159.32 Aligned_cols=141 Identities=19% Similarity=0.249 Sum_probs=107.8
Q ss_pred ccCCcccCc---chhHHHHHHhhcCCC-CCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcc
Q 043334 3 VIPSIFIPE---DWSFTFYEGLNRHPD-SILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNA 78 (903)
Q Consensus 3 ~~p~vfiP~---~w~~~~~~~L~~~~~-~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~g 78 (903)
..|++|... .-+..+.+.+..... ...++.+|||+|||+|.+++.+++. +.+|+|+|+|+.|++.|++|+..++
T Consensus 202 ~~pgvFs~~~~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~ 279 (381)
T 3dmg_A 202 HLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANA 279 (381)
T ss_dssp ECTTCTTTTSCCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTT
T ss_pred eCCCceeCCCCCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC
Confidence 568999943 333444444433211 1236789999999999999999987 6799999999999999999998887
Q ss_pred cccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccc
Q 043334 79 LDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQG 158 (903)
Q Consensus 79 l~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~ 158 (903)
+ +++++++|+.+.... .++||+|++||||.......
T Consensus 280 ~-----------------~v~~~~~D~~~~~~~-~~~fD~Ii~npp~~~~~~~~-------------------------- 315 (381)
T 3dmg_A 280 L-----------------KAQALHSDVDEALTE-EARFDIIVTNPPFHVGGAVI-------------------------- 315 (381)
T ss_dssp C-----------------CCEEEECSTTTTSCT-TCCEEEEEECCCCCTTCSSC--------------------------
T ss_pred C-----------------CeEEEEcchhhcccc-CCCeEEEEECCchhhccccc--------------------------
Confidence 6 489999999987654 24899999999998532211
Q ss_pred cccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcH
Q 043334 159 FVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQ 196 (903)
Q Consensus 159 ~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~ 196 (903)
.+....+++++.++|||||.+++..+.....
T Consensus 316 -------~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 316 -------LDVAQAFVNVAAARLRPGGVFFLVSNPFLKY 346 (381)
T ss_dssp -------CHHHHHHHHHHHHHEEEEEEEEEEECTTSCH
T ss_pred -------HHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh
Confidence 1223478999999999999999988765544
No 238
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.54 E-value=2.2e-13 Score=166.70 Aligned_cols=172 Identities=12% Similarity=0.157 Sum_probs=130.5
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcc-
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFK- 732 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~- 732 (903)
.....+.+++.+|.+. .+++++|+++++..++.++++|||.|+++.|+|.++...+...|++++.++.+.+ +|.
T Consensus 207 v~~~ee~la~l~G~d~----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~~g~ 281 (755)
T 2vyc_A 207 FGESEKYAARVFGADR----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-RYGI 281 (755)
T ss_dssp HHHHHHHHHHHHTCSE----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-TTSC
T ss_pred HHHHHHHHHHHhCCCc----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-cccc
Confidence 3456666777778652 5899999999999999999999999999999999999999999999999998642 333
Q ss_pred ---c-----CHHHHHHHhhcC--CC-------cEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCC-cc
Q 043334 733 ---M-----TEKTLVTILETV--KK-------PWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGL-EF 794 (903)
Q Consensus 733 ---l-----d~~~L~~~l~~~--~~-------~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l-~f 794 (903)
+ |++.+++++++. ++ +++++++| ||||.+++ +++|+++|+++|++|++|++|+.. .|
T Consensus 282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p--n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~ 356 (755)
T 2vyc_A 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC--TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_dssp BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS--CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGG
T ss_pred ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC--CCCceecC---HHHHHHHHHHcCCEEEEECcCchhccc
Confidence 4 999999998752 21 38999998 59999987 888999999999999999999743 34
Q ss_pred CCC--CCCCCchhhhhhh-hccCCCCCCceEEEccCchhcccccce-eeEEEeCc
Q 043334 795 NYE--GWGGWDLEGCLSK-LYSSTNSSFNVSLLGGLSLKMLTGALK-FGFLVLNH 845 (903)
Q Consensus 795 ~~~--~~s~~s~~~~~~~-l~~~~~~~~~vI~l~S~SK~~g~~GlR-iG~lv~~~ 845 (903)
++. +.+ + +.. ..+.. ..++|++.|+||++ +|.+ .|++++++
T Consensus 357 ~~~~~~~~-----~-~~g~~aD~~--~~~~iv~~S~hK~L--~g~~~g~~i~~~~ 401 (755)
T 2vyc_A 357 NPIYADHY-----A-MRGEPGDHN--GPTVFATHSTHKLL--NALSQASYIHVRE 401 (755)
T ss_dssp CGGGTTSS-----S-SCSCCCCCS--SBEEEEEEETTTSS--SCCTTCEEEEEEC
T ss_pred CcccCCcc-----h-hcCCcCCcc--CCCeEEEECccccc--cCcCCeeeeeecC
Confidence 432 110 1 110 00111 24789999999986 5777 56666643
No 239
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.53 E-value=1.1e-14 Score=153.06 Aligned_cols=193 Identities=14% Similarity=0.174 Sum_probs=126.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++...++. +++++++|+.+..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~-----------------~~~~~~~d~~~~~ 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGL-----------------KPRLACQDISNLN 97 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTC-----------------CCEEECCCGGGCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCC-----------------CeEEEecccccCC
Confidence 6789999999999999999887 67999999999999999999866543 6899999998876
Q ss_pred cCCCCceeEEEECC-CCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RDHDIQLERIVGCI-PQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~~~~fD~Iv~Np-Py~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.. ++||+|+++. .....++ ......+++++.++|||||.+++
T Consensus 98 ~~--~~fD~v~~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 98 IN--RKFDLITCCLDSTNYIID-----------------------------------SDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CS--CCEEEEEECTTGGGGCCS-----------------------------------HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cc--CCceEEEEcCccccccCC-----------------------------------HHHHHHHHHHHHHhcCCCcEEEE
Confidence 44 4899999753 2221100 01234789999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceeeeeeccCCcceeEEecccCCCcccHHHHHHhhh
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALVEIEKNSPHRFEFFMGLSGDLPICARTAWAYGK 268 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~e~~~~~~f~f~~~~~~~~p~~~~~~~~~~~ 268 (903)
.+... ......+....|....-.....|.. . .
T Consensus 141 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------------~--------------------------------~ 172 (246)
T 1y8c_A 141 DINSY---YKLSQVLGNNDFNYDDDEVFYYWEN-------------Q--------------------------------F 172 (246)
T ss_dssp EEECH---HHHHTTTTTCCEEEEETTEEEEEEE-------------E--------------------------------E
T ss_pred EecCH---HHHHhhcCcceEEecCCcEEEEEec-------------c--------------------------------c
Confidence 76542 2211122111111100000000000 0 0
Q ss_pred cCcceeeeeeee-----------eccccCchhHHHHHHHHh-ccccccccccccccccccccccccchHH
Q 043334 269 AGGRISHALSVY-----------SCQLHQPNQVKKIFKFLK-NGFHEISSSLDLSFEDDSVADEKIPFLA 326 (903)
Q Consensus 269 ~~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~l~-~g~~~~~~~~d~~~~~~~~~~~~~~~~~ 326 (903)
.+..+.|.++++ +.+..+.+..+++.++|+ +||..++.+.++..++....+.++.+||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~va 242 (246)
T 1y8c_A 173 EDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLV 242 (246)
T ss_dssp ETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEE
T ss_pred CCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEE
Confidence 011111222111 223345678899999999 9999999999988777666778877765
No 240
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.53 E-value=5.1e-14 Score=158.77 Aligned_cols=141 Identities=21% Similarity=0.254 Sum_probs=104.3
Q ss_pred ccCCcccCc--chh-HHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc
Q 043334 3 VIPSIFIPE--DWS-FTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL 79 (903)
Q Consensus 3 ~~p~vfiP~--~w~-~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl 79 (903)
..|++|.+. +.. ..+++.+.. ..+.+|||+|||+|.+++.+++..|+.+|+|+|+|+.|++.|++|+..+++
T Consensus 197 ~~pg~Fs~~~~d~~~~~ll~~l~~-----~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl 271 (375)
T 4dcm_A 197 NHANVFSRTGLDIGARFFMQHLPE-----NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 271 (375)
T ss_dssp ECTTCTTCSSCCHHHHHHHHTCCC-----SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCG
T ss_pred eCCCcccCCcccHHHHHHHHhCcc-----cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCC
Confidence 468899884 222 233333322 234799999999999999999998889999999999999999999999886
Q ss_pred ccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccc
Q 043334 80 DEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGF 159 (903)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~ 159 (903)
+. ..+++++.+|+.+.... ++||+|++||||........
T Consensus 272 ~~-------------~~~v~~~~~D~~~~~~~--~~fD~Ii~nppfh~~~~~~~-------------------------- 310 (375)
T 4dcm_A 272 EA-------------LDRCEFMINNALSGVEP--FRFNAVLCNPPFHQQHALTD-------------------------- 310 (375)
T ss_dssp GG-------------GGGEEEEECSTTTTCCT--TCEEEEEECCCC-------C--------------------------
T ss_pred Cc-------------CceEEEEechhhccCCC--CCeeEEEECCCcccCcccCH--------------------------
Confidence 20 12589999999886433 38999999999984321100
Q ss_pred ccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcH
Q 043334 160 VEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQ 196 (903)
Q Consensus 160 v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~ 196 (903)
.....+++++.++|||||++++..+.....
T Consensus 311 -------~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 311 -------NVAWEMFHHARRCLKINGELYIVANRHLDY 340 (375)
T ss_dssp -------CHHHHHHHHHHHHEEEEEEEEEEEETTSCH
T ss_pred -------HHHHHHHHHHHHhCCCCcEEEEEEECCcCH
Confidence 012268999999999999999977665544
No 241
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.53 E-value=6.3e-14 Score=141.27 Aligned_cols=143 Identities=26% Similarity=0.372 Sum_probs=111.9
Q ss_pred ccCCcccCc---chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc
Q 043334 3 VIPSIFIPE---DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL 79 (903)
Q Consensus 3 ~~p~vfiP~---~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl 79 (903)
..+++|.|. .+...+++.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..+++
T Consensus 27 ~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~ 99 (194)
T 1dus_A 27 TDSGVFSYGKVDKGTKILVENVVV-----DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNL 99 (194)
T ss_dssp EETTSTTTTSCCHHHHHHHHHCCC-----CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred eCCCcCCccccchHHHHHHHHccc-----CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 457888887 455555555432 25789999999999999999887 78999999999999999999988776
Q ss_pred ccCCCCcchhhhcccCC-cEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccc
Q 043334 80 DEKGQPIYDAEKKTLLD-RVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQG 158 (903)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~ 158 (903)
+ . +++++++|+.+... .++||+|++|+||....
T Consensus 100 ~---------------~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~~~~~----------------------------- 133 (194)
T 1dus_A 100 D---------------NYDIRVVHSDLYENVK--DRKYNKIITNPPIRAGK----------------------------- 133 (194)
T ss_dssp T---------------TSCEEEEECSTTTTCT--TSCEEEEEECCCSTTCH-----------------------------
T ss_pred C---------------ccceEEEECchhcccc--cCCceEEEECCCcccch-----------------------------
Confidence 2 1 49999999988654 33899999999987310
Q ss_pred cccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHC
Q 043334 159 FVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERR 206 (903)
Q Consensus 159 ~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~ 206 (903)
+....+++++.++|+|||.+++..........+.+.+++.
T Consensus 134 --------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 173 (194)
T 1dus_A 134 --------EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV 173 (194)
T ss_dssp --------HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH
T ss_pred --------hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH
Confidence 1123789999999999999999887776666556677665
No 242
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.53 E-value=7.2e-14 Score=142.39 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=93.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|.++..+++.+ +..+|+|+|+|+.+++.|++|+..+++ .++++++++|+.+.
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 86 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL---------------IDRVTLIKDGHQNM 86 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC---------------GGGEEEECSCGGGG
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCCeEEEECCHHHH
Confidence 57899999999999999999986 456999999999999999999988876 25899999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....++||+|++|+||+...+..... ..+....+++++.++|||||.+++
T Consensus 87 ~~~~~~~fD~v~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 87 DKYIDCPVKAVMFNLGYLPSGDHSIST-----------------------------RPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp GGTCCSCEEEEEEEESBCTTSCTTCBC-----------------------------CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhccCCceEEEEcCCcccCccccccc-----------------------------CcccHHHHHHHHHHhCcCCCEEEE
Confidence 533335899999999996543322111 111233689999999999999998
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 138 ~~ 139 (197)
T 3eey_A 138 VI 139 (197)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 243
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.53 E-value=6.9e-14 Score=148.90 Aligned_cols=146 Identities=14% Similarity=0.085 Sum_probs=112.5
Q ss_pred chhHHHHHHhhcCCC-CCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhh
Q 043334 12 DWSFTFYEGLNRHPD-SILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAE 90 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~-~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~ 90 (903)
-|...|++.+..... ...++.+|||+|||+|..++.++...|+.+|+|+|+|+.+++.|++|+..+++
T Consensus 61 ~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l----------- 129 (249)
T 3g89_A 61 VVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL----------- 129 (249)
T ss_dssp HHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC-----------
T ss_pred HhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-----------
Confidence 366677776654332 12367899999999999999999988899999999999999999999998887
Q ss_pred hcccCCcEEEEEccccccccC--CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHH
Q 043334 91 KKTLLDRVEFHESDLLAYCRD--HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGL 168 (903)
Q Consensus 91 ~~~~~~~v~~~~gDl~~~~~~--~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~ 168 (903)
.+++++++|+.++... ..++||+|+++-- . .
T Consensus 130 -----~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~----~---~----------------------------------- 162 (249)
T 3g89_A 130 -----KGARALWGRAEVLAREAGHREAYARAVARAV----A---P----------------------------------- 162 (249)
T ss_dssp -----SSEEEEECCHHHHTTSTTTTTCEEEEEEESS----C---C-----------------------------------
T ss_pred -----CceEEEECcHHHhhcccccCCCceEEEECCc----C---C-----------------------------------
Confidence 3699999999887642 1248999996410 0 0
Q ss_pred HHHHHHHHhhcccCCcEEEEEeCCCCcHH--HHHHHHHHCCCeEEEEEe
Q 043334 169 IARAVEEGIGVIKPSGIMIFNMGGRPGQG--VCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 169 ~~~~l~~~~~~LkpgG~ll~~~~~~~~~~--~l~~ll~~~gf~~~~~~~ 215 (903)
+..+++.+.++|||||++++..+.....+ .+.+.++..||...++..
T Consensus 163 ~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~ 211 (249)
T 3g89_A 163 LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLA 211 (249)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEE
Confidence 22679999999999999999877654333 235667788999877643
No 244
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.52 E-value=4.2e-14 Score=145.17 Aligned_cols=126 Identities=21% Similarity=0.243 Sum_probs=103.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++|+..+++ .++++.++|+.+..
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~~~ 122 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGI----------------YDIALQKTSLLADV 122 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC----------------CCCEEEESSTTTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC----------------CceEEEeccccccC
Confidence 5789999999999999998874 556999999999999999999988876 34999999998764
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. ++||+|++|+|+. .+..+++++.++|+|||.+++.
T Consensus 123 ~---~~fD~i~~~~~~~-----------------------------------------~~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 123 D---GKFDLIVANILAE-----------------------------------------ILLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp C---SCEEEEEEESCHH-----------------------------------------HHHHHGGGSGGGEEEEEEEEEE
T ss_pred C---CCceEEEECCcHH-----------------------------------------HHHHHHHHHHHhcCCCCEEEEE
Confidence 2 3899999886542 0236789999999999999997
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
.........+.+++++.||+.+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 185 (205)
T 3grz_A 159 GIDYLQLPKIEQALAENSFQIDLKMRA 185 (205)
T ss_dssp EEEGGGHHHHHHHHHHTTEEEEEEEEE
T ss_pred ecCcccHHHHHHHHHHcCCceEEeecc
Confidence 555555666788999999999887443
No 245
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.28 E-value=8.7e-16 Score=177.83 Aligned_cols=258 Identities=11% Similarity=0.059 Sum_probs=171.3
Q ss_pred cCCCCCeEEccCCCCC--CC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 611 ETPNSGLIHMDVDQSF--LP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 611 ~~~~~~~IdLs~g~p~--~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
...|...||+..|... ++ .++.+.+++.+.+.+.....+..+....+++.+++.++ .. + .+++++++++++..
T Consensus 96 D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p-~~--~-~v~~~nSGseA~~~ 171 (465)
T 2yky_A 96 DVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFP-SI--D-LVRFTNSGTEANLM 171 (465)
Confidence 3467789999877653 33 46788888888776532222344556777888877664 22 3 79999999999998
Q ss_pred HHHHhc--cCCCeEEEcCCCcHHHHHHHH----HcCC--EEEEecCCCCCCcccCHHHHHHHhhc--CCCcEEEEECCCC
Q 043334 688 LVLCCI--LEGGTLCFPAGSNGNYVSAAR----FLKA--NIVNIPTESEVGFKMTEKTLVTILET--VKKPWVYISGPTI 757 (903)
Q Consensus 688 ll~~l~--~pGD~Vlv~~P~y~~~~~~~~----~~G~--~vv~v~~~~~~~f~ld~~~L~~~l~~--~~~~~vil~~P~~ 757 (903)
++.... ..++.|++.+++|..+...+. ..|+ .++.+|. -|+++|++.++. ...++|+ +.|.+
T Consensus 172 Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi-~epv~ 243 (465)
T 2yky_A 172 ALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAIL-VEPML 243 (465)
Confidence 887642 345899999999976554333 1233 2233322 268888888873 2223444 55654
Q ss_pred CCcccCC-CHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccc
Q 043334 758 NPTGLLY-SNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGAL 836 (903)
Q Consensus 758 NPTG~v~-s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~Gl 836 (903)
|+||.+. +.+.+++|.++|+++|+++|+||+|. +.++ .. .. ..... ...-+.||||.+|. |+
T Consensus 244 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~~---~a----~~~~g-------v~pDi~t~sK~lg~-G~ 306 (465)
T 2yky_A 244 GAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-GG---GA----QEMLG-------ISADLTTLGKYIGG-GM 306 (465)
Confidence 6799654 68899999999999999999999997 5321 11 11 11111 22335599999985 99
Q ss_pred eeeEEEeCcHHHHHHHHh------CC-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 837 KFGFLVLNHPQLVDAFSS------FP-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 837 RiG~lv~~~~~li~~l~~------~~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
|+||++++++ +++.+.. .. .+.+.++++|.++.++|+.-.. +.+.+++.++.+.++++.+.
T Consensus 307 piG~v~~~~~-i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~--~~~~~~~~~~~~~l~~~L~~ 374 (465)
T 2yky_A 307 SFGAFGGRRD-LMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT--RQAASDLSASGDRFRANLNR 374 (465)
Confidence 9999999987 9888876 12 3667888999999888842111 23445556666666555543
No 246
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.52 E-value=3.2e-13 Score=139.28 Aligned_cols=125 Identities=13% Similarity=0.064 Sum_probs=103.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+++++.|++|++.+++ .++++++++|+.+..
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~---------------~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL---------------SPRMRAVQGTAPAAL 117 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC---------------TTTEEEEESCTTGGG
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC---------------CCCEEEEeCchhhhc
Confidence 5789999999999999999987 78999999999999999999988887 248999999998854
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... .+||+|+++... + .. +++++.+.|||||++++.
T Consensus 118 ~~~-~~~D~v~~~~~~----~--------------------------------------~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 118 ADL-PLPEAVFIGGGG----S--------------------------------------QA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp TTS-CCCSEEEECSCC----C--------------------------------------HH-HHHHHHHHSCTTCEEEEE
T ss_pred ccC-CCCCEEEECCcc----c--------------------------------------HH-HHHHHHHhcCCCcEEEEE
Confidence 333 379999965311 0 12 688999999999999998
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.........+.+.+++.||++..+..
T Consensus 154 ~~~~~~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 154 AVTLESETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp ECSHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred ecCcccHHHHHHHHHhCCCcEEEEEe
Confidence 87766667777889999988877643
No 247
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.51 E-value=1.2e-13 Score=144.38 Aligned_cols=128 Identities=11% Similarity=0.177 Sum_probs=106.9
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
+.++.+|+|+|||+|++++.+++..+..+|+|+|+++.+++.|++|+..+|++ ++++++++|+++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~---------------~~I~~~~gD~l~ 83 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT---------------SKIDVRLANGLS 83 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT---------------TTEEEEECSGGG
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---------------CcEEEEECchhh
Confidence 34688999999999999999999876779999999999999999999999983 689999999998
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
...+.. +||+|+. ...|-+++..+++++.+.|+++|.|+
T Consensus 84 ~~~~~~-~~D~Ivi----------------------------------------aGmGg~lI~~IL~~~~~~l~~~~~lI 122 (230)
T 3lec_A 84 AFEEAD-NIDTITI----------------------------------------CGMGGRLIADILNNDIDKLQHVKTLV 122 (230)
T ss_dssp GCCGGG-CCCEEEE----------------------------------------EEECHHHHHHHHHHTGGGGTTCCEEE
T ss_pred cccccc-ccCEEEE----------------------------------------eCCchHHHHHHHHHHHHHhCcCCEEE
Confidence 865432 6999861 11223556689999999999999988
Q ss_pred EEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 188 FNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
+.-. .+...+++++.+.||.+...
T Consensus 123 lqp~--~~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 123 LQPN--NREDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp EEES--SCHHHHHHHHHHTTEEEEEE
T ss_pred EECC--CChHHHHHHHHHCCCEEEEE
Confidence 8764 35778889999999998776
No 248
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.49 E-value=1.4e-13 Score=145.06 Aligned_cols=128 Identities=14% Similarity=0.186 Sum_probs=106.5
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
+.++.+|||+|||+|.+++.+++..+..+|+|+|+|+.+++.|++|+..+|++ +++++.++|.++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~---------------~~I~v~~gD~l~ 83 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT---------------EQIDVRKGNGLA 83 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT---------------TTEEEEECSGGG
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---------------ceEEEEecchhh
Confidence 34688999999999999999999876779999999999999999999999983 579999999998
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
...+. .+||+|+. ...|-+++..+++++.+.|+++|.|+
T Consensus 84 ~~~~~-~~~D~Ivi----------------------------------------agmGg~lI~~IL~~~~~~L~~~~~lI 122 (244)
T 3gnl_A 84 VIEKK-DAIDTIVI----------------------------------------AGMGGTLIRTILEEGAAKLAGVTKLI 122 (244)
T ss_dssp GCCGG-GCCCEEEE----------------------------------------EEECHHHHHHHHHHTGGGGTTCCEEE
T ss_pred ccCcc-ccccEEEE----------------------------------------eCCchHHHHHHHHHHHHHhCCCCEEE
Confidence 86543 15999872 01233556689999999999999999
Q ss_pred EEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 188 FNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
+.-. .+...+++++.+.||.+...
T Consensus 123 lq~~--~~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 123 LQPN--IAAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp EEES--SCHHHHHHHHHHHTEEEEEE
T ss_pred EEcC--CChHHHHHHHHHCCCEEEEE
Confidence 8764 46778889999999998665
No 249
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.49 E-value=1.1e-13 Score=139.28 Aligned_cols=111 Identities=12% Similarity=0.146 Sum_probs=86.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.+++.+++. +..+|+|+|+|+.+++.|++|+..+++ .++++++++|+.+.
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKE---------------PEKFEVRKMDANRA 106 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTC---------------GGGEEEEESCHHHH
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCC---------------CcceEEEECcHHHH
Confidence 35789999999999999998874 457999999999999999999988876 24799999999885
Q ss_pred ccC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHH--hhcccCC
Q 043334 109 CRD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEG--IGVIKPS 183 (903)
Q Consensus 109 ~~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~--~~~Lkpg 183 (903)
... ..++||+|++||||.... .. ..++.+ .++|+||
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~~~~----~~-----------------------------------~~~~~l~~~~~L~~g 147 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYAKQE----IV-----------------------------------SQLEKMLERQLLTNE 147 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGGGCC----HH-----------------------------------HHHHHHHHTTCEEEE
T ss_pred HHHHHhcCCCCCEEEECCCCCchh----HH-----------------------------------HHHHHHHHhcccCCC
Confidence 431 123899999999976211 00 223333 8899999
Q ss_pred cEEEEEeCCCC
Q 043334 184 GIMIFNMGGRP 194 (903)
Q Consensus 184 G~ll~~~~~~~ 194 (903)
|.+++......
T Consensus 148 G~l~~~~~~~~ 158 (187)
T 2fhp_A 148 AVIVCETDKTV 158 (187)
T ss_dssp EEEEEEEETTC
T ss_pred CEEEEEeCCcc
Confidence 99999876543
No 250
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.49 E-value=5.7e-14 Score=140.62 Aligned_cols=110 Identities=13% Similarity=0.089 Sum_probs=86.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. +..+|+|+|+|+.+++.|++|+..++++ ++++++++|+.+..
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~---------------~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAE---------------NRFTLLKMEAERAI 94 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCG---------------GGEEEECSCHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCC---------------CceEEEECcHHHhH
Confidence 5789999999999999999887 5579999999999999999999888762 47999999998853
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHH--hhcccCCcEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEG--IGVIKPSGIMI 187 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~--~~~LkpgG~ll 187 (903)
....++||+|++||||... . ...+++.+ .++|+|||.++
T Consensus 95 ~~~~~~fD~i~~~~~~~~~-----~----------------------------------~~~~~~~l~~~~~L~~gG~l~ 135 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAKE-----T----------------------------------IVATIEALAAKNLLSEQVMVV 135 (177)
T ss_dssp HHBCSCEEEEEECCSSHHH-----H----------------------------------HHHHHHHHHHTTCEEEEEEEE
T ss_pred HhhcCCCCEEEECCCCCcc-----h----------------------------------HHHHHHHHHhCCCcCCCcEEE
Confidence 3222379999999998520 0 01233344 49999999999
Q ss_pred EEeCCCC
Q 043334 188 FNMGGRP 194 (903)
Q Consensus 188 ~~~~~~~ 194 (903)
+......
T Consensus 136 ~~~~~~~ 142 (177)
T 2esr_A 136 CETDKTV 142 (177)
T ss_dssp EEEETTC
T ss_pred EEECCcc
Confidence 9876543
No 251
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.49 E-value=2.4e-13 Score=143.52 Aligned_cols=127 Identities=12% Similarity=0.133 Sum_probs=101.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.++...++.+|+|+|+|+.|++.|++|+..+++ .+++++++|+.++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~~~ 133 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL----------------ENTTFCHDRAETFG 133 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC----------------SSEEEEESCHHHHT
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----------------CCEEEEeccHHHhc
Confidence 57899999999999999999877788999999999999999999988876 36999999998875
Q ss_pred cC--CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 110 RD--HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 110 ~~--~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.. ..++||+|+++.. . .+..+++.+.++|||||.++
T Consensus 134 ~~~~~~~~fD~V~~~~~----~--------------------------------------~~~~~l~~~~~~LkpgG~l~ 171 (240)
T 1xdz_A 134 QRKDVRESYDIVTARAV----A--------------------------------------RLSVLSELCLPLVKKNGLFV 171 (240)
T ss_dssp TCTTTTTCEEEEEEECC----S--------------------------------------CHHHHHHHHGGGEEEEEEEE
T ss_pred ccccccCCccEEEEecc----C--------------------------------------CHHHHHHHHHHhcCCCCEEE
Confidence 32 1348999996420 0 02378999999999999999
Q ss_pred EEeCCCCcHH--HHHHHHHHCCCeEEEEE
Q 043334 188 FNMGGRPGQG--VCKRLFERRGFRVDKLW 214 (903)
Q Consensus 188 ~~~~~~~~~~--~l~~ll~~~gf~~~~~~ 214 (903)
+..+.....+ .+.+.+++.||......
T Consensus 172 ~~~g~~~~~~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 172 ALKAASAEEELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp EEECC-CHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EEeCCCchHHHHHHHHHHHHcCCeEeEEE
Confidence 9876654332 34567888999887763
No 252
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.49 E-value=2.2e-13 Score=165.49 Aligned_cols=176 Identities=9% Similarity=0.067 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHH-HHHcCCEEEEecCCCCCC
Q 043334 652 DVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSA-ARFLKANIVNIPTESEVG 730 (903)
Q Consensus 652 ~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~-~~~~G~~vv~v~~~~~~~ 730 (903)
.....+++.+++.+|.+. .+++++|+++++..++.++++|||.|+++.|+|.++... ++..|++++.++... +.
T Consensus 173 ~~i~e~e~~lA~~~gae~----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~-~~ 247 (730)
T 1c4k_A 173 GPAVAAEKHAARVYNADK----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR-NP 247 (730)
T ss_dssp THHHHHHHHHHHHTTCSE----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE-CT
T ss_pred HHHHHHHHHHHHHHCCCc----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCc-cc
Confidence 345677778888888753 499999999999999999999999999999999998887 888999999998753 23
Q ss_pred cc----cCHHHH-----HHHhhcC------C--C-cEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCC-
Q 043334 731 FK----MTEKTL-----VTILETV------K--K-PWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSG- 791 (903)
Q Consensus 731 f~----ld~~~L-----~~~l~~~------~--~-~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~- 791 (903)
|. +|++++ +++++++ + + +++++++| ||||.+++ +++|+++|+++|++||+|++|+.
T Consensus 248 ~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p--n~~G~v~d---l~~I~~la~~~g~~livDeAh~~~ 322 (730)
T 1c4k_A 248 YGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG--TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGY 322 (730)
T ss_dssp TCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB--CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCCG
T ss_pred cCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC--CCCCeecC---HHHHHHHHHHcCCeEEEEcccccc
Confidence 33 677777 8888764 3 1 58999998 48999987 88999999999999999999964
Q ss_pred CccCCCCCCCCchhhhhhh-hccCCCCCCceEEEccCchhcccccceee-EEEeCc
Q 043334 792 LEFNYEGWGGWDLEGCLSK-LYSSTNSSFNVSLLGGLSLKMLTGALKFG-FLVLNH 845 (903)
Q Consensus 792 l~f~~~~~s~~s~~~~~~~-l~~~~~~~~~vI~l~S~SK~~g~~GlRiG-~lv~~~ 845 (903)
+.|.+... . . ..+.. ..+.. ..++++++|+||++ +|.+.| +++.++
T Consensus 323 ~~f~~~~~-g--~-~~l~~~~~g~D--~~~~iv~~S~hK~L--~g~~~gg~I~v~~ 370 (730)
T 1c4k_A 323 EQFIPMMR-N--S-SPLLIDDLGPE--DPGIIVVQSVHKQQ--AGFSQTSQIHKKD 370 (730)
T ss_dssp GGSSGGGG-G--G-CTTSCCCCCTT--SCEEEEEECHHHHS--SCCTTCEEEEEEC
T ss_pred cccCcccC-C--c-CcccccccCCC--CCCEEEEECCCCCC--CCCCCEEEEEecc
Confidence 34543110 0 0 00110 00110 13689999999986 577765 554433
No 253
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.49 E-value=1e-13 Score=149.99 Aligned_cols=124 Identities=21% Similarity=0.280 Sum_probs=102.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++..+. +|+|+|+|+.|++.|++|+..|+++ ++++++++|+.++.
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~---------------~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVE---------------DRMSAYNMDNRDFP 188 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCT---------------TTEEEECSCTTTCC
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCC---------------ceEEEEECCHHHhc
Confidence 5789999999999999999988533 8999999999999999999999872 46999999999987
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. .++||+|++|||+.. . .+++++.++|||||.+++.
T Consensus 189 ~--~~~fD~Vi~~~p~~~-----------~-------------------------------~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 189 G--ENIADRILMGYVVRT-----------H-------------------------------EFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp C--CSCEEEEEECCCSSG-----------G-------------------------------GGHHHHHHHEEEEEEEEEE
T ss_pred c--cCCccEEEECCchhH-----------H-------------------------------HHHHHHHHHCCCCeEEEEE
Confidence 6 348999999999542 0 4578899999999999984
Q ss_pred eCC------CCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MGG------RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~------~~~~~~l~~ll~~~gf~~~~~ 213 (903)
... ......+.+.+++.||.....
T Consensus 225 ~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 225 NTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp EEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred EeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 433 334556678899999987663
No 254
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.49 E-value=3.2e-13 Score=141.36 Aligned_cols=133 Identities=17% Similarity=0.182 Sum_probs=102.9
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.|++++... .+++++++|+.+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------~~~~~~~~d~~~ 103 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN------------------LKVKYIEADYSK 103 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC------------------TTEEEEESCTTT
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC------------------CCEEEEeCchhc
Confidence 45678999999999999999999988899999999999999999887322 279999999998
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.... ++||+|+++.+....++ .....+++++.++|||||.++
T Consensus 104 ~~~~--~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~ 145 (234)
T 3dtn_A 104 YDFE--EKYDMVVSALSIHHLED------------------------------------EDKKELYKRSYSILKESGIFI 145 (234)
T ss_dssp CCCC--SCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCC--CCceEEEEeCccccCCH------------------------------------HHHHHHHHHHHHhcCCCcEEE
Confidence 7655 48999997643332110 112268999999999999999
Q ss_pred EEeCC----------------------------------------CCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 188 FNMGG----------------------------------------RPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 188 ~~~~~----------------------------------------~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
+.... ......+.++++++||+.++.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~ 214 (234)
T 3dtn_A 146 NADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYK 214 (234)
T ss_dssp EEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeee
Confidence 85411 113345567899999999887543
No 255
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.48 E-value=9.5e-13 Score=139.61 Aligned_cols=131 Identities=21% Similarity=0.237 Sum_probs=104.0
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..++.+|||+|||+|.++..+++..+. +|+|+|+|+.+++.|++++..+++ .++++++++|+.+
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~---------------~~~~~~~~~d~~~ 107 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANC---------------ADRVKGITGSMDN 107 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTC---------------TTTEEEEECCTTS
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCC---------------CCceEEEECChhh
Confidence 346789999999999999999998754 999999999999999999988877 3579999999987
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
++... ++||+|+++...... + ...+++++.++|||||.++
T Consensus 108 ~~~~~-~~fD~v~~~~~l~~~-~--------------------------------------~~~~l~~~~~~L~pgG~l~ 147 (257)
T 3f4k_A 108 LPFQN-EELDLIWSEGAIYNI-G--------------------------------------FERGMNEWSKYLKKGGFIA 147 (257)
T ss_dssp CSSCT-TCEEEEEEESCSCCC-C--------------------------------------HHHHHHHHHTTEEEEEEEE
T ss_pred CCCCC-CCEEEEEecChHhhc-C--------------------------------------HHHHHHHHHHHcCCCcEEE
Confidence 75433 489999986443321 0 1267999999999999999
Q ss_pred EEeCC--------------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 188 FNMGG--------------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 188 ~~~~~--------------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
+.... ......+.++++++||+.+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 148 VSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred EEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 85421 2234566788999999988763
No 256
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.48 E-value=3.9e-13 Score=150.43 Aligned_cols=135 Identities=18% Similarity=0.208 Sum_probs=106.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.+++.++... +..+|+|+|+|+.|++.|++|+..+|+ +++++.++|+.+
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~----------------~~i~~~~~D~~~ 265 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL----------------SWIRFLRADARH 265 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC----------------TTCEEEECCGGG
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC----------------CceEEEeCChhh
Confidence 357899999999999999999987 678999999999999999999998887 379999999999
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
+..... .||+|++||||...... ......++..+++++.++|||||.++
T Consensus 266 ~~~~~~-~~D~Ii~npPyg~r~~~------------------------------~~~~~~~~~~~~~~~~~~LkpgG~l~ 314 (354)
T 3tma_A 266 LPRFFP-EVDRILANPPHGLRLGR------------------------------KEGLFHLYWDFLRGALALLPPGGRVA 314 (354)
T ss_dssp GGGTCC-CCSEEEECCCSCC----------------------------------CHHHHHHHHHHHHHHHHTSCTTCEEE
T ss_pred CccccC-CCCEEEECCCCcCccCC------------------------------cccHHHHHHHHHHHHHHhcCCCcEEE
Confidence 865543 68999999999742110 01122346689999999999999999
Q ss_pred EEeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 188 FNMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
+.++.. ...++.++ .||+..+..
T Consensus 315 i~t~~~---~~~~~~~~-~g~~~~~~~ 337 (354)
T 3tma_A 315 LLTLRP---ALLKRALP-PGFALRHAR 337 (354)
T ss_dssp EEESCH---HHHHHHCC-TTEEEEEEE
T ss_pred EEeCCH---HHHHHHhh-cCcEEEEEE
Confidence 987652 33344555 888876653
No 257
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.48 E-value=3.9e-13 Score=139.04 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=104.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++++..+++ +++++.++|+.+.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----------------~~~~~~~~d~~~~ 100 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL----------------KNVEVLKSEENKI 100 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC----------------TTEEEEECBTTBC
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC----------------CcEEEEecccccC
Confidence 57899999999999999999987 567999999999999999999988776 4799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+++-.....++ ...+++++.++|||||.+++
T Consensus 101 ~~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 101 PLPD-NTVDFIFMAFTFHELSE--------------------------------------PLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp SSCS-SCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCC-CCeeEEEeehhhhhcCC--------------------------------------HHHHHHHHHHHhCCCeEEEE
Confidence 5433 48999997633322111 23789999999999999999
Q ss_pred EeCC------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMGG------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~~------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.... ......+.+++++.||++++..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 142 IDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp EEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 5421 2346777899999999988763
No 258
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.48 E-value=6.4e-13 Score=140.63 Aligned_cols=107 Identities=21% Similarity=0.377 Sum_probs=84.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++++..++. +++++++|+.+..
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~-----------------~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNL-----------------KIEFLQGDVLEIA 101 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-----------------CCEEEESCGGGCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCC-----------------ceEEEECChhhcc
Confidence 5679999999999999999987 67999999999999999999876654 6999999999875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.. ++||+|+++.... .+. ..+....+++++.++|||||.+++.
T Consensus 102 ~~--~~fD~v~~~~~~~-----~~~------------------------------~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 102 FK--NEFDAVTMFFSTI-----MYF------------------------------DEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp CC--SCEEEEEECSSGG-----GGS------------------------------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cC--CCccEEEEcCCch-----hcC------------------------------CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 43 3899998631111 000 0112347899999999999999997
Q ss_pred eCC
Q 043334 190 MGG 192 (903)
Q Consensus 190 ~~~ 192 (903)
.+.
T Consensus 145 ~~~ 147 (252)
T 1wzn_A 145 FPC 147 (252)
T ss_dssp EEC
T ss_pred ccc
Confidence 654
No 259
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.48 E-value=6.6e-13 Score=142.10 Aligned_cols=131 Identities=18% Similarity=0.155 Sum_probs=104.7
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++...++ .++++++++|+.+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL---------------QNRVTGIVGSMDD 107 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC---------------TTTEEEEECCTTS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC---------------CcCcEEEEcChhh
Confidence 346889999999999999999987 677999999999999999999988876 3579999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
++... ++||+|+++.+.... + ...+++++.++|||||.++
T Consensus 108 ~~~~~-~~fD~i~~~~~~~~~-~--------------------------------------~~~~l~~~~~~LkpgG~l~ 147 (267)
T 3kkz_A 108 LPFRN-EELDLIWSEGAIYNI-G--------------------------------------FERGLNEWRKYLKKGGYLA 147 (267)
T ss_dssp CCCCT-TCEEEEEESSCGGGT-C--------------------------------------HHHHHHHHGGGEEEEEEEE
T ss_pred CCCCC-CCEEEEEEcCCceec-C--------------------------------------HHHHHHHHHHHcCCCCEEE
Confidence 75433 489999986544321 0 1268999999999999999
Q ss_pred EEeCC--------------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 188 FNMGG--------------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 188 ~~~~~--------------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
+.... ......+.++++++||+.+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 148 VSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred EEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 85421 1234566788999999988763
No 260
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.48 E-value=3.9e-13 Score=145.58 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=86.7
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++.+| +.+|+|+|+|+.+++.|++++...+ .++++.++|+.+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----------------~~v~~~~~d~~~ 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP-----------------YDSEFLEGDATE 83 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS-----------------SEEEEEESCTTT
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC-----------------CceEEEEcchhh
Confidence 4678999999999999999999887 4899999999999999999986554 279999999998
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
++.+ ++||+|+++......++ ...++++++++|||||.++
T Consensus 84 ~~~~--~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 84 IELN--DKYDIAICHAFLLHMTT--------------------------------------PETMLQKMIHSVKKGGKII 123 (284)
T ss_dssp CCCS--SCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHTEEEEEEEE
T ss_pred cCcC--CCeeEEEECChhhcCCC--------------------------------------HHHHHHHHHHHcCCCCEEE
Confidence 7653 38999997533221111 1278999999999999999
Q ss_pred EEeCC
Q 043334 188 FNMGG 192 (903)
Q Consensus 188 ~~~~~ 192 (903)
+....
T Consensus 124 ~~~~~ 128 (284)
T 3gu3_A 124 CFEPH 128 (284)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 86543
No 261
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.47 E-value=1.3e-12 Score=157.71 Aligned_cols=198 Identities=11% Similarity=0.094 Sum_probs=139.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCccc
Q 043334 654 TPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKM 733 (903)
Q Consensus 654 r~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~l 733 (903)
..++++.+++.+|.+. .+++++|++.++..++.++++|||.|+++.++|.++...+...|++++.++.+. +.|.+
T Consensus 197 i~eaE~~lA~~fGa~~----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~-~~~gi 271 (715)
T 3n75_A 197 HKEAEQYIARVFNADR----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTR-NAYGI 271 (715)
T ss_dssp HHHHHHHHHHHHTCSE----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCB-CTTCC
T ss_pred HHHHHHHHHHHhCCCC----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEeccc-ccccc
Confidence 4567777777888754 488999999999999999999999999999999999999999999999999864 35654
Q ss_pred ---------CHHHHHHHhhcC--CC--cEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCc-cCCCCC
Q 043334 734 ---------TEKTLVTILETV--KK--PWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLE-FNYEGW 799 (903)
Q Consensus 734 ---------d~~~L~~~l~~~--~~--~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~-f~~~~~ 799 (903)
|++.+++++++. ++ +++++++| ||+|.+++ +++|.++|++++ |++||+|+... |.+...
T Consensus 272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p--n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~f~~~~~ 344 (715)
T 3n75_A 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS--TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (715)
T ss_dssp BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS--CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGGGSGGGT
T ss_pred ccCcccccCCHHHHHHHHhhCcCccCceEEEEECC--CCCCccCC---HHHHHHHhCcCc--EEEccccccccccCCccc
Confidence 899999999753 22 27999999 69999998 666777777663 78999997543 443210
Q ss_pred CCCchhhhhhhhccCCCCCCc-eEEEccCchhcccccc-eeeEEEeCcH---HHHHHHHhCCCCCCCcHHHHHHHHHHH
Q 043334 800 GGWDLEGCLSKLYSSTNSSFN-VSLLGGLSLKMLTGAL-KFGFLVLNHP---QLVDAFSSFPGLSKPHSTVRYAIKKLL 873 (903)
Q Consensus 800 s~~s~~~~~~~l~~~~~~~~~-vI~l~S~SK~~g~~Gl-RiG~lv~~~~---~li~~l~~~~~~~~~s~~~Q~aa~~~L 873 (903)
. . ..+. ..... +. +++++|++|+++ |+ -.||+++++. ..++.......+.+++.+.-.+...++
T Consensus 345 ~-~---~al~-~g~~a---D~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~ 413 (715)
T 3n75_A 345 G-K---CGMS-GGRVE---GKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAA 413 (715)
T ss_dssp T-S---STTS-SSCCT---TCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHH
T ss_pred c-c---cccc-cCcCC---CEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHH
Confidence 0 0 0011 00001 33 367999999975 54 2478888653 123333334445566666655554444
No 262
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.47 E-value=3.2e-13 Score=143.17 Aligned_cols=129 Identities=18% Similarity=0.153 Sum_probs=101.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.|++.|++++..+++ .+++++.++|+.++
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV---------------SERVHFIHNDAAGY 98 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC---------------TTTEEEEESCCTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC---------------CcceEEEECChHhC
Confidence 467899999999999999999887 67999999999999999999988776 25899999999987
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+. .++||+|+++......++ ...+++++.++|||||.+++
T Consensus 99 ~~--~~~fD~V~~~~~~~~~~~--------------------------------------~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 99 VA--NEKCDVAACVGATWIAGG--------------------------------------FAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp CC--SSCEEEEEEESCGGGTSS--------------------------------------SHHHHHHHTTSEEEEEEEEE
T ss_pred Cc--CCCCCEEEECCChHhcCC--------------------------------------HHHHHHHHHHHcCCCeEEEE
Confidence 65 348999997422221110 12789999999999999998
Q ss_pred EeCC---------------------CCcHHHHHHHHHHCCCeEEEE
Q 043334 189 NMGG---------------------RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 189 ~~~~---------------------~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.... ......+.+++++.||..+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 139 GEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp EEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred ecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEE
Confidence 5321 113355678899999987665
No 263
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.47 E-value=6.2e-13 Score=143.72 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=103.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ .++++++++|+.+..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~ 130 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGV---------------SDNMQFIHCAAQDVA 130 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CC---------------GGGEEEEESCGGGTG
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC---------------CcceEEEEcCHHHhh
Confidence 4679999999999999999987 78999999999999999999987776 258999999999886
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|+++-.....++ ...+++++.++|||||.+++.
T Consensus 131 ~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 131 SHLETPVDLILFHAVLEWVAD--------------------------------------PRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp GGCSSCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHTEEEEEEEEEE
T ss_pred hhcCCCceEEEECchhhcccC--------------------------------------HHHHHHHHHHHcCCCeEEEEE
Confidence 333458999997533321111 127899999999999999985
Q ss_pred eC---------------------------------CCCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MG---------------------------------GRPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~---------------------------------~~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
.. .......+.++++++||+++.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 232 (285)
T 4htf_A 173 FYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGV 232 (285)
T ss_dssp EEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEEE
T ss_pred EeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeeeE
Confidence 42 1234567788999999999877543
No 264
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.47 E-value=1.9e-13 Score=149.55 Aligned_cols=134 Identities=16% Similarity=0.166 Sum_probs=107.7
Q ss_pred CCCeEEEeCCccCHHHHHHH-HHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIA-EKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la-~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..++ ...++.+|+|+|+|+.+++.|++|+..+++ .++++++++|+.+.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 182 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL---------------AGQITLHRQDAWKL 182 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT---------------GGGEEEEECCGGGC
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC---------------CCceEEEECchhcC
Confidence 67899999999999999986 456788999999999999999999987776 25799999999997
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... ++||+|++|.++...++. .....+++++.++|||||++++
T Consensus 183 ~~~--~~fD~v~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 183 DTR--EGYDLLTSNGLNIYEPDD-----------------------------------ARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp CCC--SCEEEEECCSSGGGCCCH-----------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred Ccc--CCeEEEEECChhhhcCCH-----------------------------------HHHHHHHHHHHHhcCCCeEEEE
Confidence 654 489999988766643321 1122679999999999999998
Q ss_pred EeCC--------------------------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGG--------------------------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~--------------------------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.... ......+.+++++.||++++...
T Consensus 226 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 226 SFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp ECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred EecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEc
Confidence 5521 13466778999999999988743
No 265
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.46 E-value=2.3e-13 Score=145.25 Aligned_cols=124 Identities=21% Similarity=0.204 Sum_probs=101.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++|+..+++ . +++.++|+.+..
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~~----------------~-v~~~~~d~~~~~ 180 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGV----------------R-PRFLEGSLEAAL 180 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTC----------------C-CEEEESCHHHHG
T ss_pred CCCEEEEecCCCcHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCC----------------c-EEEEECChhhcC
Confidence 6789999999999999998886 34999999999999999999988876 3 899999998854
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.. ++||+|++|++.. .+..+++++.++|||||++++.
T Consensus 181 ~~--~~fD~Vv~n~~~~-----------------------------------------~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 181 PF--GPFDLLVANLYAE-----------------------------------------LHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp GG--CCEEEEEEECCHH-----------------------------------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred cC--CCCCEEEECCcHH-----------------------------------------HHHHHHHHHHHHcCCCCEEEEE
Confidence 32 2899999875421 0226789999999999999996
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.........+.+.+++.||+..+...
T Consensus 218 ~~~~~~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 218 GILKDRAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp EEEGGGHHHHHHHHHHTTCEEEEEEE
T ss_pred eeccCCHHHHHHHHHHCCCEEEEEec
Confidence 55555667778899999999987744
No 266
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.46 E-value=2.4e-13 Score=141.83 Aligned_cols=133 Identities=12% Similarity=0.100 Sum_probs=100.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+|+..|+.+|+|+|+|+.|++.|++|+..+++ .++.++++|+.+..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l----------------~nv~~~~~Da~~~l 97 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL----------------SNLRVMCHDAVEVL 97 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC----------------SSEEEECSCHHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC----------------CcEEEEECCHHHHH
Confidence 46799999999999999999999889999999999999999999988876 47999999998852
Q ss_pred c--CCCCceeEEEEC--CCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 110 R--DHDIQLERIVGC--IPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 110 ~--~~~~~fD~Iv~N--pPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
. ...++||.|++| +||..... ..... . ...+++++.++|||||.
T Consensus 98 ~~~~~~~~~d~v~~~~~~p~~~~~~------~~rr~--------------~------------~~~~l~~~~r~LkpGG~ 145 (218)
T 3dxy_A 98 HKMIPDNSLRMVQLFFPDPWHKARH------NKRRI--------------V------------QVPFAELVKSKLQLGGV 145 (218)
T ss_dssp HHHSCTTCEEEEEEESCCCCCSGGG------GGGSS--------------C------------SHHHHHHHHHHEEEEEE
T ss_pred HHHcCCCChheEEEeCCCCccchhh------hhhhh--------------h------------hHHHHHHHHHHcCCCcE
Confidence 2 123489999998 55542110 00000 0 01589999999999999
Q ss_pred EEEEeCCCCcHHHHHHHHHHC-CCeE
Q 043334 186 MIFNMGGRPGQGVCKRLFERR-GFRV 210 (903)
Q Consensus 186 ll~~~~~~~~~~~l~~ll~~~-gf~~ 210 (903)
+++.+........+.+.+... +|..
T Consensus 146 l~i~td~~~~~~~~~~~~~~~~~~~~ 171 (218)
T 3dxy_A 146 FHMATDWEPYAEHMLEVMSSIDGYKN 171 (218)
T ss_dssp EEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred EEEEeCCHHHHHHHHHHHHhCCCccc
Confidence 999887654444444555544 4554
No 267
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.46 E-value=4e-13 Score=144.95 Aligned_cols=129 Identities=13% Similarity=0.183 Sum_probs=105.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEK-WLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~-~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.+++.+++. .++.+|+++|+++.+++.|++|+..+++ .++++++.+|+.+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~ 175 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL---------------IERVTIKVRDISE 175 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC---------------GGGEEEECCCGGG
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---------------CCCEEEEECCHHH
Confidence 46789999999999999999998 4578999999999999999999988775 2479999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.... ++||+|++|+|... .+++++.++|+|||.++
T Consensus 176 ~~~~--~~~D~V~~~~~~~~-------------------------------------------~~l~~~~~~L~pgG~l~ 210 (277)
T 1o54_A 176 GFDE--KDVDALFLDVPDPW-------------------------------------------NYIDKCWEALKGGGRFA 210 (277)
T ss_dssp CCSC--CSEEEEEECCSCGG-------------------------------------------GTHHHHHHHEEEEEEEE
T ss_pred cccC--CccCEEEECCcCHH-------------------------------------------HHHHHHHHHcCCCCEEE
Confidence 7332 37999999876330 45888899999999999
Q ss_pred EEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 188 FNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
+..+.......+.+.+++.||...+.+...
T Consensus 211 ~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~ 240 (277)
T 1o54_A 211 TVCPTTNQVQETLKKLQELPFIRIEVWESL 240 (277)
T ss_dssp EEESSHHHHHHHHHHHHHSSEEEEEEECCC
T ss_pred EEeCCHHHHHHHHHHHHHCCCceeEEEEEe
Confidence 988765444455677888999988775443
No 268
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.45 E-value=3.3e-13 Score=149.69 Aligned_cols=137 Identities=13% Similarity=0.095 Sum_probs=101.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCC-cEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLD-RVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~-~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.|++.|++|+..++++ + +++++++|+.++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~---------------~~~v~~i~~D~~~~ 215 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLE---------------QAPIRWICEDAMKF 215 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCT---------------TSCEEEECSCHHHH
T ss_pred CCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCC---------------ccceEEEECcHHHH
Confidence 4679999999999999999986 459999999999999999999998872 3 499999999887
Q ss_pred ccCC---CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 109 CRDH---DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 109 ~~~~---~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
.... ..+||+|++|||++........ ......+..+++++.++|+|||.
T Consensus 216 l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~----------------------------~~~~~~~~~ll~~~~~~LkpgG~ 267 (332)
T 2igt_A 216 IQREERRGSTYDIILTDPPKFGRGTHGEV----------------------------WQLFDHLPLMLDICREILSPKAL 267 (332)
T ss_dssp HHHHHHHTCCBSEEEECCCSEEECTTCCE----------------------------EEHHHHHHHHHHHHHHTBCTTCC
T ss_pred HHHHHhcCCCceEEEECCccccCCchHHH----------------------------HHHHHHHHHHHHHHHHhcCcCcE
Confidence 5320 2389999999998743321110 01123355889999999999999
Q ss_pred EEEEeCCC--CcHHHHHHHHH----HCCCeEE
Q 043334 186 MIFNMGGR--PGQGVCKRLFE----RRGFRVD 211 (903)
Q Consensus 186 ll~~~~~~--~~~~~l~~ll~----~~gf~~~ 211 (903)
+++..... .....++++++ +.|+++.
T Consensus 268 lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 268 GLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 88765433 23444444444 6777665
No 269
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.45 E-value=7.9e-13 Score=141.99 Aligned_cols=133 Identities=20% Similarity=0.275 Sum_probs=104.8
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..++.+|||+|||+|.++..+++..|+.+|+|+|+|+.+++.|++++..+++ ++++++++|+.+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----------------~~~~~~~~d~~~ 98 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI----------------KNVKFLQANIFS 98 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC----------------CSEEEEECCGGG
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----------------CCcEEEEccccc
Confidence 3468899999999999999999998889999999999999999999988776 479999999998
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
++... ++||+|+++......++ ...+++++.++|||||.++
T Consensus 99 ~~~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~ 139 (276)
T 3mgg_A 99 LPFED-SSFDHIFVCFVLEHLQS--------------------------------------PEEALKSLKKVLKPGGTIT 139 (276)
T ss_dssp CCSCT-TCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEE
T ss_pred CCCCC-CCeeEEEEechhhhcCC--------------------------------------HHHHHHHHHHHcCCCcEEE
Confidence 76443 48999997643332111 1267999999999999999
Q ss_pred EEeCCC------------------------------CcHHHHHHHHHHCCCeEEEEEe
Q 043334 188 FNMGGR------------------------------PGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 188 ~~~~~~------------------------------~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
+..... .....+.++++++||+.+....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~ 197 (276)
T 3mgg_A 140 VIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEP 197 (276)
T ss_dssp EEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEE
T ss_pred EEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEee
Confidence 854210 1123456789999999887743
No 270
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.45 E-value=8.9e-14 Score=147.66 Aligned_cols=130 Identities=15% Similarity=0.213 Sum_probs=91.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHH--hCCCEEEEEeCCHHHHHHHHHHHHhc---ccccC-----------CCCcchhhhcc
Q 043334 30 KDKTVAELGCGNGWITIAIAEK--WLPSKVYGLDINPRAIRISWINLYLN---ALDEK-----------GQPIYDAEKKT 93 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~--~~~~~V~giDis~~al~~A~~n~~~~---gl~~~-----------~~~~~~~~~~~ 93 (903)
++.+|||+|||+|.+++.+++. .++.+|+|+|+|+.|++.|++|+..+ +++.. +.+.+ .....
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSY-LEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHH-HHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccc-hhhhh
Confidence 4679999999999999999987 66789999999999999999998766 44100 00000 00000
Q ss_pred cCCcEE-------------EEEccccccccC----CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccc
Q 043334 94 LLDRVE-------------FHESDLLAYCRD----HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCAL 156 (903)
Q Consensus 94 ~~~~v~-------------~~~gDl~~~~~~----~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al 156 (903)
...+++ +.++|+.+.... ...+||+|++||||+.......
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~----------------------- 186 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEG----------------------- 186 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSS-----------------------
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccc-----------------------
Confidence 000145 999999886421 2237999999999986443211
Q ss_pred cccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 157 QGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 157 ~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
..+.+.+..+++++.++|+|||++++.
T Consensus 187 ------~~~~~~~~~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 187 ------QVPGQPVAGLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp ------CCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred ------cccccHHHHHHHHHHHhcCCCcEEEEe
Confidence 123455678999999999999999984
No 271
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.45 E-value=2.3e-13 Score=140.09 Aligned_cols=155 Identities=12% Similarity=0.071 Sum_probs=101.0
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhh-
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAE- 90 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~- 90 (903)
.....+++.+. +.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++....... .....
T Consensus 9 ~~l~~~~~~l~-----~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~-----~~~~~~ 76 (203)
T 1pjz_A 9 KDLQQYWSSLN-----VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHI-----TSQGDF 76 (203)
T ss_dssp HHHHHHHHHHC-----CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEE-----EEETTE
T ss_pred HHHHHHHHhcc-----cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCccc-----cccccc
Confidence 34445555443 125789999999999999999997 689999999999999999876421000 00000
Q ss_pred hcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHH
Q 043334 91 KKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIA 170 (903)
Q Consensus 91 ~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~ 170 (903)
......+++++++|+.++.....++||+|+++-.+.. +.. +...
T Consensus 77 ~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~------l~~------------------------------~~~~ 120 (203)
T 1pjz_A 77 KVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIA------LPA------------------------------DMRE 120 (203)
T ss_dssp EEEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGG------SCH------------------------------HHHH
T ss_pred ccccCCccEEEECccccCCcccCCCEEEEEECcchhh------CCH------------------------------HHHH
Confidence 0000247999999999876432138999996533221 111 1123
Q ss_pred HHHHHHhhcccCCcEEEEE-eCC----------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 171 RAVEEGIGVIKPSGIMIFN-MGG----------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 171 ~~l~~~~~~LkpgG~ll~~-~~~----------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.+++++.++|||||++++. ... ....+.+++++.+ ||++.....
T Consensus 121 ~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~ 175 (203)
T 1pjz_A 121 RYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGG 175 (203)
T ss_dssp HHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEecc
Confidence 6899999999999984442 221 1245666777777 888776643
No 272
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.45 E-value=1e-12 Score=139.90 Aligned_cols=144 Identities=17% Similarity=0.182 Sum_probs=104.1
Q ss_pred cCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcch
Q 043334 9 IPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYD 88 (903)
Q Consensus 9 iP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~ 88 (903)
.+......+.+.+.. .++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|++++..+++
T Consensus 21 ~~~~~~~~l~~~l~~-----~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~--------- 84 (260)
T 1vl5_A 21 AKGSDLAKLMQIAAL-----KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGH--------- 84 (260)
T ss_dssp --CCCHHHHHHHHTC-----CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTC---------
T ss_pred cCHHHHHHHHHHhCC-----CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCC---------
Confidence 333344444454432 256899999999999999999874 4999999999999999999987775
Q ss_pred hhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHH
Q 043334 89 AEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGL 168 (903)
Q Consensus 89 ~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~ 168 (903)
+++.++++|+.+++... ++||+|+++-.....++
T Consensus 85 -------~~v~~~~~d~~~l~~~~-~~fD~V~~~~~l~~~~d-------------------------------------- 118 (260)
T 1vl5_A 85 -------QQVEYVQGDAEQMPFTD-ERFHIVTCRIAAHHFPN-------------------------------------- 118 (260)
T ss_dssp -------CSEEEEECCC-CCCSCT-TCEEEEEEESCGGGCSC--------------------------------------
T ss_pred -------CceEEEEecHHhCCCCC-CCEEEEEEhhhhHhcCC--------------------------------------
Confidence 47999999998875443 48999997632221111
Q ss_pred HHHHHHHHhhcccCCcEEEEEeC------------------------CCCcHHHHHHHHHHCCCeEEEEE
Q 043334 169 IARAVEEGIGVIKPSGIMIFNMG------------------------GRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 169 ~~~~l~~~~~~LkpgG~ll~~~~------------------------~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
...+++++.++|||||.+++... .......+.+++++.||......
T Consensus 119 ~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 188 (260)
T 1vl5_A 119 PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELH 188 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEE
Confidence 22789999999999999998421 11234556778888898876663
No 273
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.44 E-value=3.8e-12 Score=148.24 Aligned_cols=202 Identities=14% Similarity=0.150 Sum_probs=146.2
Q ss_pred cHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCC-------CCcEEecCchHHHHHHHHHHhcc----
Q 043334 630 PSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDI-------NAEFIYADCSQSLFNKLVLCCIL---- 694 (903)
Q Consensus 630 p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~p-------e~~I~vt~Gs~~al~~ll~~l~~---- 694 (903)
|..+.+.+..++.. |....+..++.+.+.+|+++.+|.+... ....++|+|+++++..++.+..+
T Consensus 92 ~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~ 171 (481)
T 4e1o_A 92 PSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKIL 171 (481)
T ss_dssp HHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHH
Confidence 44455666666644 2233456788999999999999987542 01467788887777666665532
Q ss_pred ---------------CCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCC-----CcEEEEEC
Q 043334 695 ---------------EGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVK-----KPWVYISG 754 (903)
Q Consensus 695 ---------------pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~-----~~~vil~~ 754 (903)
+++.|+++.++|..+...++..|++++.+|++ +++.+|+++|++++++.+ +.+|+++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~ 249 (481)
T 4e1o_A 172 EMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCATL 249 (481)
T ss_dssp HHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred HhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEec
Confidence 57799999999999999999999999999986 467899999999987541 24688888
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccc
Q 043334 755 PTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTG 834 (903)
Q Consensus 755 P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~ 834 (903)
++ |+||.+-+ +++|.++|++||+++++|.+|+...+..... ......+.. ...+..+.+|.++.|
T Consensus 250 ~~-t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~-----~~~~~gi~~------aDsi~~~~hK~l~~p 314 (481)
T 4e1o_A 250 GT-TGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEF-----RGFLKGIEY------ADSFTFNPSKWMMVH 314 (481)
T ss_dssp SC-TTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGG-----GGGGTTGGG------CSEEEECHHHHSSCC
T ss_pred CC-CCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhh-----HHHhcCccc------CCEEEEChHHhcCCC
Confidence 98 99998855 8999999999999999999997643322211 011111111 245678999998766
Q ss_pred cceeeEEEeCcHHHH
Q 043334 835 ALKFGFLVLNHPQLV 849 (903)
Q Consensus 835 GlRiG~lv~~~~~li 849 (903)
.-+|+++..+..+.
T Consensus 315 -~g~g~l~~~~~~~l 328 (481)
T 4e1o_A 315 -FDCTGFWVKDKYKL 328 (481)
T ss_dssp -SSCEEEEESBHHHH
T ss_pred -CceEEEEEeCHHHH
Confidence 45678887776443
No 274
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.44 E-value=3.3e-13 Score=138.87 Aligned_cols=128 Identities=19% Similarity=0.219 Sum_probs=101.7
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccC
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD 111 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~ 111 (903)
.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++..+++ .++++++++|+.+....
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~---------------~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANL---------------NDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTC---------------TTTEEEEECBTTBCSSC
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccc---------------cCceEEEEcCHHHCCCC
Confidence 39999999999999999998 678999999999999999999988776 25899999999886544
Q ss_pred CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeC
Q 043334 112 HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMG 191 (903)
Q Consensus 112 ~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~ 191 (903)
. ++||+|+++......++ ...+++++.++|||||.+++...
T Consensus 109 ~-~~~D~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 109 D-NYADLIVSRGSVFFWED--------------------------------------VATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp T-TCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred c-ccccEEEECchHhhccC--------------------------------------HHHHHHHHHHhCCCCCEEEEEec
Confidence 3 48999998754432211 22689999999999999999642
Q ss_pred CC-----------------------------CcHHHHHHHHHHCCCeEEEEE
Q 043334 192 GR-----------------------------PGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 192 ~~-----------------------------~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.. .....++++++++||+.++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 150 FGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp CSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred cCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 21 122556788999999887764
No 275
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.44 E-value=4.2e-13 Score=142.51 Aligned_cols=127 Identities=19% Similarity=0.277 Sum_probs=105.7
Q ss_pred CCCCeEEEeCCccCHHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEK-WLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~-~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++. .++.+|+|+|+++++++.|++|+..++++ +++++.++|+.+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~---------------~~v~~~~~d~~~ 156 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD---------------DRVTIKLKDIYE 156 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT---------------TTEEEECSCGGG
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC---------------CceEEEECchhh
Confidence 36789999999999999999998 55789999999999999999999888762 469999999997
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.... ++||+|++|+|... .+++++.++|+|||.++
T Consensus 157 ~~~~--~~~D~v~~~~~~~~-------------------------------------------~~l~~~~~~L~~gG~l~ 191 (255)
T 3mb5_A 157 GIEE--ENVDHVILDLPQPE-------------------------------------------RVVEHAAKALKPGGFFV 191 (255)
T ss_dssp CCCC--CSEEEEEECSSCGG-------------------------------------------GGHHHHHHHEEEEEEEE
T ss_pred ccCC--CCcCEEEECCCCHH-------------------------------------------HHHHHHHHHcCCCCEEE
Confidence 7443 37999998876320 45888999999999999
Q ss_pred EEeCCCCcHHHHHHHHHHCC--CeEEEEEe
Q 043334 188 FNMGGRPGQGVCKRLFERRG--FRVDKLWQ 215 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~g--f~~~~~~~ 215 (903)
+..........+.+.+++.| |...+.+.
T Consensus 192 ~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 192 AYTPCSNQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp EEESSHHHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred EEECCHHHHHHHHHHHHHcCCCccccEEEE
Confidence 98776655566678899999 98777643
No 276
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.43 E-value=1.9e-12 Score=142.56 Aligned_cols=151 Identities=19% Similarity=0.253 Sum_probs=109.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..+++..+ ..+|+|+|+|+.+++.+++|+..+|+ .+++++++|+.++
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~----------------~~v~~~~~D~~~~ 181 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV----------------LNVILFHSSSLHI 181 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC----------------CSEEEESSCGGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC----------------CeEEEEECChhhc
Confidence 578999999999999999999864 47999999999999999999998887 4799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... .++||+|++|||+.........+.....+..+. ..........+++++.++|||||++++
T Consensus 182 ~~~-~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~----------------~~~~~~~q~~~L~~~~~~LkpGG~lv~ 244 (315)
T 1ixk_A 182 GEL-NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDD----------------IKFCQGLQMRLLEKGLEVLKPGGILVY 244 (315)
T ss_dssp GGG-CCCEEEEEEECCTTSTTTCC--------CCHHH----------------HHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccc-cccCCEEEEeCCCCCcccccCChhHhhcCCHHH----------------HHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 542 238999999999864332221111000000000 011223446899999999999999999
Q ss_pred EeCC---CCcHHHHHHHHHHCCCeEEEE
Q 043334 189 NMGG---RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 189 ~~~~---~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.+.+ ......+...+++.||+.+.+
T Consensus 245 stcs~~~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 245 STCSLEPEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp EESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred EeCCCChHHhHHHHHHHHhcCCCEEecC
Confidence 6543 345566677888888876544
No 277
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=9.1e-13 Score=134.73 Aligned_cols=124 Identities=16% Similarity=0.201 Sum_probs=99.0
Q ss_pred CCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR 110 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~ 110 (903)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++. ++++++++|+.++..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~---------------------~~~~~~~~d~~~~~~ 98 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH---------------------PSVTFHHGTITDLSD 98 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC---------------------TTSEEECCCGGGGGG
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC---------------------CCCeEEeCccccccc
Confidence 679999999999999999987 679999999999999999873 478999999998764
Q ss_pred CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEe
Q 043334 111 DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNM 190 (903)
Q Consensus 111 ~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~ 190 (903)
.. ++||+|+++-.....+. +....+++++.++|||||.+++..
T Consensus 99 ~~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 99 SP-KRWAGLLAWYSLIHMGP------------------------------------GELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp SC-CCEEEEEEESSSTTCCT------------------------------------TTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CC-CCeEEEEehhhHhcCCH------------------------------------HHHHHHHHHHHHHcCCCcEEEEEE
Confidence 43 48999998643332110 012378999999999999999865
Q ss_pred CCC---------------CcHHHHHHHHHHCCCeEEEEE
Q 043334 191 GGR---------------PGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 191 ~~~---------------~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... .....+++++++.||+++...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 142 FSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp ECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 332 246778899999999998874
No 278
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.43 E-value=2.1e-12 Score=140.84 Aligned_cols=113 Identities=15% Similarity=0.129 Sum_probs=89.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.|++++..+++ .+++++.++|+.++
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 134 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS---------------PRRKEVRIQGWEEF 134 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC---------------SSCEEEEECCGGGC
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC---------------CCceEEEECCHHHc
Confidence 4678999999999999999999875 8999999999999999999988876 35899999999886
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.++||+|+++..+...++... ..|.+.+..+++++.++|||||++++
T Consensus 135 ----~~~fD~v~~~~~~~~~~d~~~-----------------------------~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 135 ----DEPVDRIVSLGAFEHFADGAG-----------------------------DAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp ----CCCCSEEEEESCGGGTTCCSS-----------------------------CCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred ----CCCccEEEEcchHHhcCcccc-----------------------------ccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 238999998744433222100 00223345889999999999999998
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 182 ~~ 183 (302)
T 3hem_A 182 HT 183 (302)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 279
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.43 E-value=4.8e-13 Score=137.49 Aligned_cols=111 Identities=12% Similarity=0.102 Sum_probs=86.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.++.. +..+|+|+|+|++|++.|++|+..++++ .++++++++|+.++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~--------------~~~v~~~~~d~~~~~ 117 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLKKNLQTLKCS--------------SEQAEVINQSSLDFL 117 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHTTCC--------------TTTEEEECSCHHHHT
T ss_pred CCCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHHhCCC--------------ccceEEEECCHHHHH
Confidence 4679999999999999987776 3469999999999999999999888751 147999999998875
Q ss_pred cC-CCCc-eeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHH--hhcccCCcE
Q 043334 110 RD-HDIQ-LERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEG--IGVIKPSGI 185 (903)
Q Consensus 110 ~~-~~~~-fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~--~~~LkpgG~ 185 (903)
.. ..++ ||+|++||||.. . . ...+++.+ .++|+|||.
T Consensus 118 ~~~~~~~~fD~I~~~~~~~~-~---~-----------------------------------~~~~l~~~~~~~~LkpgG~ 158 (201)
T 2ift_A 118 KQPQNQPHFDVVFLDPPFHF-N---L-----------------------------------AEQAISLLCENNWLKPNAL 158 (201)
T ss_dssp TSCCSSCCEEEEEECCCSSS-C---H-----------------------------------HHHHHHHHHHTTCEEEEEE
T ss_pred HhhccCCCCCEEEECCCCCC-c---c-----------------------------------HHHHHHHHHhcCccCCCcE
Confidence 43 1347 999999999751 1 0 11345555 678999999
Q ss_pred EEEEeCCCC
Q 043334 186 MIFNMGGRP 194 (903)
Q Consensus 186 ll~~~~~~~ 194 (903)
+++......
T Consensus 159 l~i~~~~~~ 167 (201)
T 2ift_A 159 IYVETEKDK 167 (201)
T ss_dssp EEEEEESSS
T ss_pred EEEEECCCC
Confidence 999776543
No 280
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.43 E-value=9.3e-13 Score=137.19 Aligned_cols=138 Identities=21% Similarity=0.257 Sum_probs=106.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..+++. .....++++.++|+.+..
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~-----------~~~~~~~~~~~~d~~~~~ 96 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLN-----------QKTGGKAEFKVENASSLS 96 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCC-----------SSSSCEEEEEECCTTSCC
T ss_pred CCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCc-----------cccCcceEEEEecccccC
Confidence 6789999999999999999987 679999999999999999998766652 111247999999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++..+...++ ......+++++.++|||||.+++.
T Consensus 97 ~~~-~~~D~v~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 97 FHD-SSFDFAVMQAFLTSVPD-----------------------------------PKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp SCT-TCEEEEEEESCGGGCCC-----------------------------------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC-CceeEEEEcchhhcCCC-----------------------------------HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 433 48999998644443221 111237899999999999999985
Q ss_pred eC----------------------------------------CCCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MG----------------------------------------GRPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~----------------------------------------~~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
.. .......++++++++||+++.+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 141 EFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp EEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred ECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 32 1235677789999999999887543
No 281
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=1.4e-12 Score=147.66 Aligned_cols=136 Identities=13% Similarity=0.117 Sum_probs=100.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||||.+++.+++. +.+|+|+|+|+.|++.|++|+..|+++ ..+.++|+.++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~-----------------~~~~~~D~~~~l 274 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLR-----------------VDIRHGEALPTL 274 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-----------------CEEEESCHHHHH
T ss_pred CCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCC-----------------CcEEEccHHHHH
Confidence 4889999999999999999986 567999999999999999999999872 346699998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....+.||+|++|||++...... . ......+..+++.+.++|+|||.+++.
T Consensus 275 ~~~~~~fD~Ii~dpP~f~~~~~~-~----------------------------~~~~~~~~~ll~~a~~~LkpGG~Lv~~ 325 (393)
T 4dmg_A 275 RGLEGPFHHVLLDPPTLVKRPEE-L----------------------------PAMKRHLVDLVREALRLLAEEGFLWLS 325 (393)
T ss_dssp HTCCCCEEEEEECCCCCCSSGGG-H----------------------------HHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHhcCCCCEEEECCCcCCCCHHH-H----------------------------HHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 44333599999999997543221 1 112234668999999999999999964
Q ss_pred eC-CCCcHH----HHHHHHHHCCCeEEEE
Q 043334 190 MG-GRPGQG----VCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~-~~~~~~----~l~~ll~~~gf~~~~~ 213 (903)
.. ...... .+.+.+.+.|.....+
T Consensus 326 s~s~~~~~~~f~~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 326 SCSYHLRLEDLLEVARRAAADLGRRLRVH 354 (393)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred ECCCCCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 43 333333 3344555666554333
No 282
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.42 E-value=2.8e-12 Score=129.25 Aligned_cols=128 Identities=16% Similarity=0.230 Sum_probs=101.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. .+++++++|+.+..
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~---------------------~~~~~~~~d~~~~~ 102 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF---------------------PEARWVVGDLSVDQ 102 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC---------------------TTSEEEECCTTTSC
T ss_pred CCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC---------------------CCCcEEEcccccCC
Confidence 6789999999999999999987 679999999999999999875 36889999998864
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++++.+.. +. .+....+++++.++|+|||.+++.
T Consensus 103 ~~~-~~~D~i~~~~~~~~~-----~~------------------------------~~~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 103 ISE-TDFDLIVSAGNVMGF-----LA------------------------------EDGREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp CCC-CCEEEEEECCCCGGG-----SC------------------------------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC-CceeEEEECCcHHhh-----cC------------------------------hHHHHHHHHHHHHHhCCCCEEEEE
Confidence 432 489999987554421 10 011237899999999999999997
Q ss_pred eCCC--CcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MGGR--PGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~~~--~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
.+.. .....+.+++++.||.+......
T Consensus 147 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 147 FGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp EETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred eCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 6543 35677788999999999887544
No 283
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.42 E-value=2.7e-12 Score=137.44 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=103.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...++ .+++++.++|+.+.
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL---------------ANRVTFSYADAMDL 123 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC---------------TTTEEEEECCTTSC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC---------------CcceEEEECccccC
Confidence 367899999999999999999876 68999999999999999999987776 35799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+... ++||+|+++-.....++ ...+++++.++|||||.+++
T Consensus 124 ~~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 124 PFED-ASFDAVWALESLHHMPD--------------------------------------RGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp CSCT-TCEEEEEEESCTTTSSC--------------------------------------HHHHHHHHHTTEEEEEEEEE
T ss_pred CCCC-CCccEEEEechhhhCCC--------------------------------------HHHHHHHHHHHcCCCeEEEE
Confidence 5433 48999997644432211 12789999999999999998
Q ss_pred EeC------------------------CCCcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMG------------------------GRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~------------------------~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... .......+.+++++.||+++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 214 (273)
T 3bus_A 165 ADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTV 214 (273)
T ss_dssp EEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEE
Confidence 431 12234566788999999987764
No 284
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.42 E-value=7.2e-13 Score=136.29 Aligned_cols=80 Identities=9% Similarity=0.071 Sum_probs=68.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.++... ..+|+|+|+|+.|++.|++|+..+++ ++++++++|+.+..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~----------------~~v~~~~~D~~~~~ 116 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKA----------------GNARVVNSNAMSFL 116 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTC----------------CSEEEECSCHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCC----------------CcEEEEECCHHHHH
Confidence 46899999999999999877763 35999999999999999999988876 48999999998864
Q ss_pred cCCCCceeEEEECCCCC
Q 043334 110 RDHDIQLERIVGCIPQI 126 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~ 126 (903)
....++||+|++||||.
T Consensus 117 ~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 117 AQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp SSCCCCEEEEEECCSSS
T ss_pred hhcCCCCCEEEECCCCC
Confidence 43334899999999976
No 285
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.42 E-value=3.2e-12 Score=131.20 Aligned_cols=127 Identities=13% Similarity=0.135 Sum_probs=96.9
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.+++.+++. +..+|+|+|+|+.+++.|++|+..+++ +++++++|+.++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------------~~~~~~~d~~~~ 109 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFKG-----------------KFKVFIGDVSEF 109 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGTT-----------------SEEEEESCGGGC
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCC-----------------CEEEEECchHHc
Confidence 46789999999999999999886 345899999999999999999876654 699999999886
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. . +||+|++||||....... ...+++++.+.+ ||.+++
T Consensus 110 ~--~--~~D~v~~~~p~~~~~~~~------------------------------------~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 110 N--S--RVDIVIMNPPFGSQRKHA------------------------------------DRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp C--C--CCSEEEECCCCSSSSTTT------------------------------------THHHHHHHHHHC--SEEEEE
T ss_pred C--C--CCCEEEEcCCCccccCCc------------------------------------hHHHHHHHHHhc--CcEEEE
Confidence 3 2 799999999998543210 015677787877 555544
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
..........+.+.+.+.||+...+..
T Consensus 148 ~~~~~~~~~~~~~~l~~~g~~~~~~~~ 174 (207)
T 1wy7_A 148 HLAKPEVRRFIEKFSWEHGFVVTHRLT 174 (207)
T ss_dssp EECCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EeCCcCCHHHHHHHHHHCCCeEEEEEE
Confidence 433444455567788999998766543
No 286
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.42 E-value=1.4e-12 Score=146.93 Aligned_cols=134 Identities=15% Similarity=0.191 Sum_probs=103.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.++...+..+|+|+|+|+.|++.|++|+..+|++ +++++.++|+.+..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~---------------~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL---------------DKIKFIQGDATQLS 281 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG---------------GGCEEEECCGGGGG
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC---------------CceEEEECChhhCC
Confidence 678999999999999999998854459999999999999999999988872 57999999999986
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|++||||....... ....+++..+++++.++| +|.+++.
T Consensus 282 ~~~-~~fD~Ii~npPyg~r~~~~------------------------------~~~~~ly~~~~~~l~r~l--~g~~~~i 328 (373)
T 3tm4_A 282 QYV-DSVDFAISNLPYGLKIGKK------------------------------SMIPDLYMKFFNELAKVL--EKRGVFI 328 (373)
T ss_dssp GTC-SCEEEEEEECCCC------------------------------------CCHHHHHHHHHHHHHHHE--EEEEEEE
T ss_pred ccc-CCcCEEEECCCCCcccCcc------------------------------hhHHHHHHHHHHHHHHHc--CCeEEEE
Confidence 543 3899999999997432100 011234568899999988 5665655
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.+. ...+++.+.+.||+..+..
T Consensus 329 ~~~---~~~~~~~~~~~G~~~~~~~ 350 (373)
T 3tm4_A 329 TTE---KKAIEEAIAENGFEIIHHR 350 (373)
T ss_dssp ESC---HHHHHHHHHHTTEEEEEEE
T ss_pred ECC---HHHHHHHHHHcCCEEEEEE
Confidence 543 3555678889999987653
No 287
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.41 E-value=9.7e-13 Score=159.50 Aligned_cols=141 Identities=16% Similarity=0.111 Sum_probs=107.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||||.+++.++.. +..+|+++|+|+.+++.|++|+..|+++ .++++++++|+.++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ngl~--------------~~~v~~i~~D~~~~l 603 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNGLT--------------GRAHRLIQADCLAWL 603 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCC--------------STTEEEEESCHHHHH
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCC--------------ccceEEEecCHHHHH
Confidence 5789999999999999998874 3457999999999999999999999872 147999999999865
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|++|||++....... . ...+...+..+++.+.++|+|||++++.
T Consensus 604 ~~~~~~fD~Ii~DPP~f~~~~~~~------~---------------------~~~~~~~~~~ll~~a~~~LkpgG~L~~s 656 (703)
T 3v97_A 604 REANEQFDLIFIDPPTFSNSKRME------D---------------------AFDVQRDHLALMKDLKRLLRAGGTIMFS 656 (703)
T ss_dssp HHCCCCEEEEEECCCSBC----------------------------------CCBHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhcCCCccEEEECCccccCCccch------h---------------------HHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 443458999999999985432110 0 0123345678999999999999999998
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
++....... .+.+.+.||+...+
T Consensus 657 ~~~~~~~~~-~~~l~~~g~~~~~i 679 (703)
T 3v97_A 657 NNKRGFRMD-LDGLAKLGLKAQEI 679 (703)
T ss_dssp ECCTTCCCC-HHHHHHTTEEEEEC
T ss_pred ECCcccccC-HHHHHHcCCceeee
Confidence 876332222 35678889876555
No 288
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.41 E-value=1.7e-12 Score=150.82 Aligned_cols=263 Identities=11% Similarity=0.064 Sum_probs=166.1
Q ss_pred CCCCCeEEccCCCCC--CC-CcHHHHHHHHHHHHc----cCCCCC---chHHHHHHHHHHHhhcCCCCCCCCcEEecCch
Q 043334 612 TPNSGLIHMDVDQSF--LP-IPSLVKAAIFESFAR----QNMSES---EIDVTPSIQQYIKSNFGFPIDINAEFIYADCS 681 (903)
Q Consensus 612 ~~~~~~IdLs~g~p~--~~-~p~~v~~al~~al~~----y~~~~G---~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs 681 (903)
..|...||+..|... ++ .++.+.+++.+.+.. +....| ..++++++++.+.+.++... + +|++++|+
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~--~-~v~f~~sG 136 (472)
T 1ohv_A 60 VDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGM--S-QLITMACG 136 (472)
T ss_dssp TTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTC--C-EEEEESSH
T ss_pred CCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCc--C-EEEEeCCc
Confidence 467789999766532 34 578899988776432 222233 56788888888877654433 3 89999999
Q ss_pred HHHHHHHHHHhc-------c------------------CC---CeEEEcCCCcHHHHHHH-HHcCCE-------------
Q 043334 682 QSLFNKLVLCCI-------L------------------EG---GTLCFPAGSNGNYVSAA-RFLKAN------------- 719 (903)
Q Consensus 682 ~~al~~ll~~l~-------~------------------pG---D~Vlv~~P~y~~~~~~~-~~~G~~------------- 719 (903)
++++..++..+. . || +.|++.+++|..+...+ ...|..
T Consensus 137 seA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (472)
T 1ohv_A 137 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP 216 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCC
T ss_pred hhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCc
Confidence 999999988763 1 46 89999999997755544 333321
Q ss_pred EEEecCCC---CCC--c-----ccCHHHHHHHhhc------CCCcEEEEECCCCCCccc-CCCHHHHHHHHHHHHhCCcE
Q 043334 720 IVNIPTES---EVG--F-----KMTEKTLVTILET------VKKPWVYISGPTINPTGL-LYSNKEIENILTVCAKYGAR 782 (903)
Q Consensus 720 vv~v~~~~---~~~--f-----~ld~~~L~~~l~~------~~~~~vil~~P~~NPTG~-v~s~eel~eI~~ia~k~~i~ 782 (903)
.+++|... ... + ..|+++|++.+++ ++ .++++.|.+|+||. +.+.+.+++|.++|+++|++
T Consensus 217 ~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~--~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~l 294 (472)
T 1ohv_A 217 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTV--AGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCA 294 (472)
T ss_dssp EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCE--EEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCE
T ss_pred ccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCE--EEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCE
Confidence 11232110 000 1 1267889988875 33 34455554588996 57899999999999999999
Q ss_pred EEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC--CCCC
Q 043334 783 VVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP--GLSK 860 (903)
Q Consensus 783 VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~--~~~~ 860 (903)
+|+||+|.++.+.+.. +. ...++-. ..+-+.||||.+ ++| ||++ ++. +. .+.... .+.+
T Consensus 295 li~DEv~~g~g~~g~~---~~----~~~~gv~-----~~~Di~t~sK~~-l~G---G~~~-~~~-~~-~~~~~~~~~T~~ 355 (472)
T 1ohv_A 295 FLVDEVQTGGGSTGKF---WA----HEHWGLD-----DPADVMTFSKKM-MTG---GFFH-KEE-FR-PNAPYRIFNTWL 355 (472)
T ss_dssp EEEECTTTTTTTTSSS---SG----GGGGCCS-----SCCSEEEECGGG-SSE---EEEE-CGG-GS-CSSSSSSCCSSS
T ss_pred EEEeCcccCCCCCCCc---hh----ccccCCC-----CCCCEEEEcccc-ccC---CccC-chh-hc-ccccccccCccC
Confidence 9999999875554432 11 1111110 002245899995 446 7777 544 42 122221 2556
Q ss_pred CcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 861 PHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 861 ~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
.+.++|.++.++|+.-.. +.+.+++.++++.++++.+.
T Consensus 356 ~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 393 (472)
T 1ohv_A 356 GDPSKNLLLAEVINIIKR--EDLLSNAAHAGKVLLTGLLD 393 (472)
T ss_dssp SCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH
Confidence 788999999888842111 23455666666666665543
No 289
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.41 E-value=1e-12 Score=138.43 Aligned_cols=146 Identities=14% Similarity=0.098 Sum_probs=105.0
Q ss_pred HHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccC
Q 043334 16 TFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLL 95 (903)
Q Consensus 16 ~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~ 95 (903)
.++..+........++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|++++..++.
T Consensus 65 ~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---------------- 127 (241)
T 2ex4_A 65 KFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGK---------------- 127 (241)
T ss_dssp HHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGG----------------
T ss_pred HHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCC----------------
Confidence 3444444332212357899999999999999988875 56999999999999999999865532
Q ss_pred CcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHH
Q 043334 96 DRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEE 175 (903)
Q Consensus 96 ~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~ 175 (903)
.+++++++|+.++.... ++||+|+++-... .+. ...+..++++
T Consensus 128 ~~~~~~~~d~~~~~~~~-~~fD~v~~~~~l~------~~~------------------------------~~~~~~~l~~ 170 (241)
T 2ex4_A 128 RVRNYFCCGLQDFTPEP-DSYDVIWIQWVIG------HLT------------------------------DQHLAEFLRR 170 (241)
T ss_dssp GEEEEEECCGGGCCCCS-SCEEEEEEESCGG------GSC------------------------------HHHHHHHHHH
T ss_pred ceEEEEEcChhhcCCCC-CCEEEEEEcchhh------hCC------------------------------HHHHHHHHHH
Confidence 36999999998876443 3899999752211 111 0113378999
Q ss_pred HhhcccCCcEEEEEeCCC--------------CcHHHHHHHHHHCCCeEEEEEe
Q 043334 176 GIGVIKPSGIMIFNMGGR--------------PGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 176 ~~~~LkpgG~ll~~~~~~--------------~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
+.++|||||.+++..... .....+++++++.||+++....
T Consensus 171 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 171 CKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp HHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 999999999999843211 1467778999999999988743
No 290
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.41 E-value=1.8e-12 Score=135.87 Aligned_cols=132 Identities=17% Similarity=0.181 Sum_probs=102.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+. ..+++++++|+.++.
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~ 128 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSPK---------------AEYFSFVKEDVFTWR 128 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSGG---------------GGGEEEECCCTTTCC
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccCC---------------CcceEEEECchhcCC
Confidence 4469999999999999998864 78999999999999999999865443 257999999999876
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... +||+|+++..+...+. +....+++++.++|||||.+++.
T Consensus 129 ~~~--~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~~ 170 (235)
T 3lcc_A 129 PTE--LFDLIFDYVFFCAIEP------------------------------------EMRPAWAKSMYELLKPDGELITL 170 (235)
T ss_dssp CSS--CEEEEEEESSTTTSCG------------------------------------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC--CeeEEEEChhhhcCCH------------------------------------HHHHHHHHHHHHHCCCCcEEEEE
Confidence 433 8999998644442210 01237899999999999999984
Q ss_pred eCC----------CCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MGG----------RPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~~----------~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
... ......+.+++++.||+++.+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 171 MYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp ECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred EecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 432 135677789999999999887443
No 291
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.41 E-value=3.1e-12 Score=140.38 Aligned_cols=131 Identities=14% Similarity=0.115 Sum_probs=103.6
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..++.+|||+|||+|.++..+++.+ +.+|+|+|+++.+++.|++++..+++ .++++++++|+.+
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~ 178 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI---------------DDHVRSRVCNMLD 178 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC---------------TTTEEEEECCTTS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC---------------CCceEEEECChhc
Confidence 4568899999999999999999986 67999999999999999999988887 3589999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.+... ++||+|+++-..... + ...+++++.++|||||+++
T Consensus 179 ~~~~~-~~fD~V~~~~~l~~~------------------------------------~---~~~~l~~~~~~LkpgG~l~ 218 (312)
T 3vc1_A 179 TPFDK-GAVTASWNNESTMYV------------------------------------D---LHDLFSEHSRFLKVGGRYV 218 (312)
T ss_dssp CCCCT-TCEEEEEEESCGGGS------------------------------------C---HHHHHHHHHHHEEEEEEEE
T ss_pred CCCCC-CCEeEEEECCchhhC------------------------------------C---HHHHHHHHHHHcCCCcEEE
Confidence 75433 489999964222110 0 2378999999999999999
Q ss_pred EEeC---C-------------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 188 FNMG---G-------------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 188 ~~~~---~-------------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
+... . ......+.+++++.||+++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 219 TITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp EEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEE
T ss_pred EEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 8432 1 1234566788999999988774
No 292
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.41 E-value=3.4e-13 Score=146.84 Aligned_cols=162 Identities=20% Similarity=0.309 Sum_probs=103.3
Q ss_pred hcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCC----------------
Q 043334 22 NRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQP---------------- 85 (903)
Q Consensus 22 ~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~---------------- 85 (903)
..+....+++++|||+|||+|.+++.+++.+++.+|+|+|+|+.|++.|++++...+......+
T Consensus 38 ~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (292)
T 3g07_A 38 RVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGT 117 (292)
T ss_dssp GTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---------------------------
T ss_pred HhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccc
Confidence 3344444578999999999999999999999889999999999999999998765543100000
Q ss_pred --------------------------cchhhhcccCCcEEEEEccccccc----cCCCCceeEEEECCCCCCCCCccchh
Q 043334 86 --------------------------IYDAEKKTLLDRVEFHESDLLAYC----RDHDIQLERIVGCIPQILNPNPDAMS 135 (903)
Q Consensus 86 --------------------------~~~~~~~~~~~~v~~~~gDl~~~~----~~~~~~fD~Iv~NpPy~~~~~~~~l~ 135 (903)
........+..+++|.++|+.... ....++||+|+++-..
T Consensus 118 ~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl---------- 187 (292)
T 3g07_A 118 TTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLT---------- 187 (292)
T ss_dssp ------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCH----------
T ss_pred ccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHH----------
Confidence 000001123368999999997643 1123489999963111
Q ss_pred hHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCC---------------------
Q 043334 136 KIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRP--------------------- 194 (903)
Q Consensus 136 ~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~--------------------- 194 (903)
.-++ -..+.+...+++++++++|||||++++......
T Consensus 188 ~~ih----------------------l~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~ 245 (292)
T 3g07_A 188 KWVH----------------------LNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQL 245 (292)
T ss_dssp HHHH----------------------HHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCC
T ss_pred HHhh----------------------hcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEE
Confidence 0000 011223355899999999999999999643210
Q ss_pred cHHHHHHHHHH--CCCeEEEEEe
Q 043334 195 GQGVCKRLFER--RGFRVDKLWQ 215 (903)
Q Consensus 195 ~~~~l~~ll~~--~gf~~~~~~~ 215 (903)
....+..++.+ .||+.++...
T Consensus 246 ~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 246 KPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp CGGGHHHHHTSTTTCCCEEEEC-
T ss_pred cHHHHHHHHHhcCCCceEEEEec
Confidence 12234567777 8898777643
No 293
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.41 E-value=8e-13 Score=147.31 Aligned_cols=135 Identities=17% Similarity=0.240 Sum_probs=103.4
Q ss_pred ccCCcccCcc---hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc
Q 043334 3 VIPSIFIPED---WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL 79 (903)
Q Consensus 3 ~~p~vfiP~~---w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl 79 (903)
..|++|.+.. .+..+++.+... .+.+|||+|||+|.+++.+++..+..+|+|+|+|+.|++.|++|+..+++
T Consensus 171 ~~~gvf~~~~~d~~~~~ll~~l~~~-----~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~ 245 (343)
T 2pjd_A 171 TLPGVFSRDGLDVGSQLLLSTLTPH-----TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV 245 (343)
T ss_dssp ECTTCTTSSSCCHHHHHHHHHSCTT-----CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC
T ss_pred ecCCccCCCCCcHHHHHHHHhcCcC-----CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 4688888752 344444444321 35689999999999999999998778999999999999999999988876
Q ss_pred ccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccc
Q 043334 80 DEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGF 159 (903)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~ 159 (903)
++.++.+|+.+.. .++||+|++||||..... .
T Consensus 246 -----------------~~~~~~~d~~~~~---~~~fD~Iv~~~~~~~g~~---~------------------------- 277 (343)
T 2pjd_A 246 -----------------EGEVFASNVFSEV---KGRFDMIISNPPFHDGMQ---T------------------------- 277 (343)
T ss_dssp -----------------CCEEEECSTTTTC---CSCEEEEEECCCCCSSSH---H-------------------------
T ss_pred -----------------CCEEEEccccccc---cCCeeEEEECCCcccCcc---C-------------------------
Confidence 4677899998764 238999999999874210 0
Q ss_pred ccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCc
Q 043334 160 VEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPG 195 (903)
Q Consensus 160 v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~ 195 (903)
.......+++++.++|||||.+++..+....
T Consensus 278 -----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 308 (343)
T 2pjd_A 278 -----SLDAAQTLIRGAVRHLNSGGELRIVANAFLP 308 (343)
T ss_dssp -----HHHHHHHHHHHHGGGEEEEEEEEEEEETTSS
T ss_pred -----CHHHHHHHHHHHHHhCCCCcEEEEEEcCCCC
Confidence 0112348899999999999999997765443
No 294
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.41 E-value=5.3e-13 Score=132.09 Aligned_cols=106 Identities=11% Similarity=0.130 Sum_probs=83.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|+..+++ +++++++|+.+..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~-----------------~~~~~~~d~~~~~ 101 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE--GWEAVLVEKDPEAVRLLKENVRRTGL-----------------GARVVALPVEVFL 101 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHTC-----------------CCEEECSCHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHHcCC-----------------ceEEEeccHHHHH
Confidence 4689999999999999999987 45699999999999999999977654 6899999998753
Q ss_pred cC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHH--hhcccCCc
Q 043334 110 RD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEG--IGVIKPSG 184 (903)
Q Consensus 110 ~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~--~~~LkpgG 184 (903)
.. ..++||+|++||||. .... .+++.+ .++|+|||
T Consensus 102 ~~~~~~~~~~D~i~~~~~~~--~~~~--------------------------------------~~~~~~~~~~~L~~gG 141 (171)
T 1ws6_A 102 PEAKAQGERFTVAFMAPPYA--MDLA--------------------------------------ALFGELLASGLVEAGG 141 (171)
T ss_dssp HHHHHTTCCEEEEEECCCTT--SCTT--------------------------------------HHHHHHHHHTCEEEEE
T ss_pred HhhhccCCceEEEEECCCCc--hhHH--------------------------------------HHHHHHHhhcccCCCc
Confidence 21 123799999999987 2110 123333 59999999
Q ss_pred EEEEEeCCCC
Q 043334 185 IMIFNMGGRP 194 (903)
Q Consensus 185 ~ll~~~~~~~ 194 (903)
.+++.+....
T Consensus 142 ~~~~~~~~~~ 151 (171)
T 1ws6_A 142 LYVLQHPKDL 151 (171)
T ss_dssp EEEEEEETTS
T ss_pred EEEEEeCCcc
Confidence 9999876543
No 295
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.41 E-value=2.2e-12 Score=132.76 Aligned_cols=124 Identities=15% Similarity=0.141 Sum_probs=98.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. ++.+.++|+.+..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~----------------------~~~~~~~d~~~~~ 98 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL----------------------GRPVRTMLFHQLD 98 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH----------------------TSCCEECCGGGCC
T ss_pred CCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc----------------------CCceEEeeeccCC
Confidence 5789999999999999999987 679999999999999999886 3567889998876
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
..++||+|+++......+ .+....+++++.++|||||.+++.
T Consensus 99 --~~~~fD~v~~~~~l~~~~------------------------------------~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 --AIDAYDAVWAHACLLHVP------------------------------------RDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp --CCSCEEEEEECSCGGGSC------------------------------------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCcEEEEEecCchhhcC------------------------------------HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 334899999764333111 112347899999999999999996
Q ss_pred eCCC--------------CcHHHHHHHHHHCC-CeEEEEEe
Q 043334 190 MGGR--------------PGQGVCKRLFERRG-FRVDKLWQ 215 (903)
Q Consensus 190 ~~~~--------------~~~~~l~~ll~~~g-f~~~~~~~ 215 (903)
.... .....+++++++.| |+++....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 141 YKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp EECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred EcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 4422 36677889999999 99988754
No 296
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.41 E-value=2e-12 Score=146.28 Aligned_cols=136 Identities=15% Similarity=0.168 Sum_probs=101.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCC-cEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLD-RVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~-~v~~~~gDl~~~ 108 (903)
++++|||+|||+|.+++.+|+. +..+|+|+|+|+.|++.|++|+..|+++ + +++++++|+.+.
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~~---------------~~~v~~~~~D~~~~ 275 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHLD---------------MANHQLVVMDVFDY 275 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTCC---------------CTTEEEEESCHHHH
T ss_pred CCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCC---------------ccceEEEECCHHHH
Confidence 5789999999999999999975 3459999999999999999999999872 3 799999999875
Q ss_pred ccC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 109 CRD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 109 ~~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
... .+.+||+|++|||++...... .......+..+++.+.+.|+|||.
T Consensus 276 l~~~~~~~~~fD~Ii~DPP~~~~~~~~-----------------------------~~~~~~~~~~ll~~~~~~L~pgG~ 326 (385)
T 2b78_A 276 FKYARRHHLTYDIIIIDPPSFARNKKE-----------------------------VFSVSKDYHKLIRQGLEILSENGL 326 (385)
T ss_dssp HHHHHHTTCCEEEEEECCCCC-----C-----------------------------CCCHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHhCCCccEEEECCCCCCCChhh-----------------------------HHHHHHHHHHHHHHHHHhcCCCcE
Confidence 431 123899999999997432110 012233466889999999999999
Q ss_pred EEEEeCCCC-cHH----HHHHHHHHCCCeE
Q 043334 186 MIFNMGGRP-GQG----VCKRLFERRGFRV 210 (903)
Q Consensus 186 ll~~~~~~~-~~~----~l~~ll~~~gf~~ 210 (903)
+++...... ... .+++.+.+.|...
T Consensus 327 l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 356 (385)
T 2b78_A 327 IIASTNAANMTVSQFKKQIEKGFGKQKHTY 356 (385)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHTTCCCEE
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHcCCcE
Confidence 999876543 223 2334455667773
No 297
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=1.1e-12 Score=141.34 Aligned_cols=104 Identities=20% Similarity=0.253 Sum_probs=89.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.+++.+++..++.+|+|+|+|+.|++.|++|++.|++ .++.++++|+.+.
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l----------------~~~~~~~~d~~~~ 181 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL----------------NNVIPILADNRDV 181 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC----------------SSEEEEESCGGGC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----------------CCEEEEECChHHc
Confidence 367899999999999999999987777999999999999999999999987 4789999999988
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.. .++||+|++|||+. . ..+++++.+.|+|||.+++
T Consensus 182 -~~-~~~~D~Vi~d~p~~-------~-----------------------------------~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 182 -EL-KDVADRVIMGYVHK-------T-----------------------------------HKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp -CC-TTCEEEEEECCCSS-------G-----------------------------------GGGHHHHHHHEEEEEEEEE
T ss_pred -Cc-cCCceEEEECCccc-------H-----------------------------------HHHHHHHHHHcCCCCEEEE
Confidence 33 34899999999971 1 0457888899999999998
Q ss_pred EeCC
Q 043334 189 NMGG 192 (903)
Q Consensus 189 ~~~~ 192 (903)
....
T Consensus 218 s~~~ 221 (272)
T 3a27_A 218 HETV 221 (272)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 6553
No 298
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.41 E-value=1.4e-12 Score=149.99 Aligned_cols=170 Identities=16% Similarity=0.206 Sum_probs=118.1
Q ss_pred cccCCcccCc--chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc
Q 043334 2 MVIPSIFIPE--DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL 79 (903)
Q Consensus 2 ~~~p~vfiP~--~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl 79 (903)
.+.|+.|++. ..+..+++.+..... ..++.+|||+|||+|.+++.+++. +.+|+|+|+|++|++.|++|+..+++
T Consensus 257 ~~~~~~f~q~n~~~~e~l~~~~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~ 333 (433)
T 1uwv_A 257 TFSPRDFIQVNAGVNQKMVARALEWLD-VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGL 333 (433)
T ss_dssp ECCSSSCCCSBHHHHHHHHHHHHHHHT-CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred EECcccccccCHHHHHHHHHHHHHhhc-CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 4688999983 334444444322111 135679999999999999999987 68999999999999999999999887
Q ss_pred ccCCCCcchhhhcccCCcEEEEEccccccccC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccc
Q 043334 80 DEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCAL 156 (903)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al 156 (903)
.+++|+++|+.+.... ..++||+|++|||+....
T Consensus 334 ----------------~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~~--------------------------- 370 (433)
T 1uwv_A 334 ----------------QNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAA--------------------------- 370 (433)
T ss_dssp ----------------CSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCCH---------------------------
T ss_pred ----------------CceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccHH---------------------------
Confidence 4899999999885321 123799999999998421
Q ss_pred cccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcceee
Q 043334 157 QGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDISALV 236 (903)
Q Consensus 157 ~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 236 (903)
.+++.+ ..++|++++++.+........+ ..+.+.||....+... ..|..+..++.++
T Consensus 371 --------------~~~~~l-~~~~p~~ivyvsc~p~tlard~-~~l~~~Gy~~~~~~~~-------d~Fp~t~HvE~v~ 427 (433)
T 1uwv_A 371 --------------GVMQQI-IKLEPIRIVYVSCNPATLARDS-EALLKAGYTIARLAML-------DMFPHTGHLESMV 427 (433)
T ss_dssp --------------HHHHHH-HHHCCSEEEEEESCHHHHHHHH-HHHHHTTCEEEEEEEE-------CCSTTSSCCEEEE
T ss_pred --------------HHHHHH-HhcCCCeEEEEECChHHHHhhH-HHHHHCCcEEEEEEEe-------ccCCCCCeEEEEE
Confidence 112222 1268999988877654433343 4667789998875222 2233445566666
Q ss_pred eeec
Q 043334 237 EIEK 240 (903)
Q Consensus 237 ~~e~ 240 (903)
.+++
T Consensus 428 ll~r 431 (433)
T 1uwv_A 428 LFSR 431 (433)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 6655
No 299
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.40 E-value=1.8e-12 Score=132.97 Aligned_cols=121 Identities=14% Similarity=0.121 Sum_probs=98.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..++...++.+|+|+|+|+.+++.|++|+..+++ .+++++++|+.+..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~~~ 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL----------------ENIEPVQSRVEEFP 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC----------------SSEEEEECCTTTSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC----------------CCeEEEecchhhCC
Confidence 46799999999999999999988889999999999999999999988876 35999999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.. ++||+|++|.. .. +..+++.+.++|+|||.+++.
T Consensus 129 ~~--~~~D~i~~~~~-------~~-----------------------------------~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 129 SE--PPFDGVISRAF-------AS-----------------------------------LNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CC--SCEEEEECSCS-------SS-----------------------------------HHHHHHHHTTSEEEEEEEEEE
T ss_pred cc--CCcCEEEEecc-------CC-----------------------------------HHHHHHHHHHhcCCCcEEEEE
Confidence 32 38999996420 00 227899999999999999999
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.+...... +.+++. ||...+.
T Consensus 165 ~~~~~~~~-~~~~~~--g~~~~~~ 185 (207)
T 1jsx_A 165 KGQMPEDE-IALLPE--EYQVESV 185 (207)
T ss_dssp ESSCCHHH-HHTSCT--TEEEEEE
T ss_pred eCCCchHH-HHHHhc--CCceeee
Confidence 88765443 344544 8887664
No 300
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.40 E-value=9.3e-13 Score=142.03 Aligned_cols=126 Identities=14% Similarity=0.153 Sum_probs=103.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhc-ccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEK-WLPSKVYGLDINPRAIRISWINLYLN-ALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~-~~~~~V~giDis~~al~~A~~n~~~~-gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
.++.+|||+|||+|.++..+++. .++.+|+|+|+++.+++.|++|+..+ |. +++++.++|+.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~----------------~~v~~~~~d~~ 172 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI----------------GNVRTSRSDIA 172 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC----------------TTEEEECSCTT
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC----------------CcEEEEECchh
Confidence 46789999999999999999997 56789999999999999999999877 65 47999999998
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+.... ++||+|++|+|.. ..+++++.++|||||.+
T Consensus 173 ~~~~~--~~fD~Vi~~~~~~-------------------------------------------~~~l~~~~~~LkpgG~l 207 (275)
T 1yb2_A 173 DFISD--QMYDAVIADIPDP-------------------------------------------WNHVQKIASMMKPGSVA 207 (275)
T ss_dssp TCCCS--CCEEEEEECCSCG-------------------------------------------GGSHHHHHHTEEEEEEE
T ss_pred ccCcC--CCccEEEEcCcCH-------------------------------------------HHHHHHHHHHcCCCCEE
Confidence 85433 3899999865521 04588899999999999
Q ss_pred EEEeCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 187 IFNMGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 187 l~~~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
++..........+.+.+++.||...+.+.
T Consensus 208 ~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 208 TFYLPNFDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp EEEESSHHHHHHHHHHSGGGTEEEEEEEE
T ss_pred EEEeCCHHHHHHHHHHHHHCCCeEEEEEE
Confidence 99887654445556778889998887754
No 301
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.40 E-value=3.6e-12 Score=127.24 Aligned_cols=120 Identities=23% Similarity=0.259 Sum_probs=99.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++ ++.+|+|+|+|+.+++.|++|+..+++ ++++++++|+.+..
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~----------------~~~~~~~~d~~~~~ 96 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNI----------------KNCQIIKGRAEDVL 96 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTC----------------CSEEEEESCHHHHG
T ss_pred CCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCC----------------CcEEEEECCccccc
Confidence 568999999999999999988 588999999999999999999988876 47999999998854
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.. ++||+|+++++ .. ...+++++.++ |||.+++.
T Consensus 97 ~~--~~~D~i~~~~~----~~--------------------------------------~~~~l~~~~~~--~gG~l~~~ 130 (183)
T 2yxd_A 97 DK--LEFNKAFIGGT----KN--------------------------------------IEKIIEILDKK--KINHIVAN 130 (183)
T ss_dssp GG--CCCSEEEECSC----SC--------------------------------------HHHHHHHHHHT--TCCEEEEE
T ss_pred cC--CCCcEEEECCc----cc--------------------------------------HHHHHHHHhhC--CCCEEEEE
Confidence 33 38999999877 10 12567777777 99999998
Q ss_pred eCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.........+.+.+++.||.....
T Consensus 131 ~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 131 TIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ecccccHHHHHHHHHHcCCeEEEE
Confidence 876666666788999999876654
No 302
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.40 E-value=1.1e-12 Score=135.78 Aligned_cols=136 Identities=14% Similarity=0.168 Sum_probs=98.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|++++..++++ .....+++++++|+....
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----------~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLP-----------RNQWERLQLIQGALTYQD 97 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCC-----------HHHHTTEEEEECCTTSCC
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCC-----------cccCcceEEEeCCccccc
Confidence 467999999999999999999877789999999999999999999776652 000137999999986554
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++-.... + ....+..+++++.++|||||.+++.
T Consensus 98 ~~~-~~fD~v~~~~~l~~------~------------------------------~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 98 KRF-HGYDAATVIEVIEH------L------------------------------DLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp GGG-CSCSEEEEESCGGG------C------------------------------CHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ccC-CCcCEEeeHHHHHc------C------------------------------CHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 332 38999997532221 1 0112347899999999999987774
Q ss_pred eCCC---------------------CcHHHHH----HHHHHCCCeEEEE
Q 043334 190 MGGR---------------------PGQGVCK----RLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~~---------------------~~~~~l~----~ll~~~gf~~~~~ 213 (903)
.... .....++ +++++.||++...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 141 PNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQ 189 (217)
T ss_dssp EBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred cCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEEE
Confidence 3211 1334444 7888999987544
No 303
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.40 E-value=5.6e-13 Score=143.59 Aligned_cols=125 Identities=21% Similarity=0.282 Sum_probs=100.7
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.+|.+|||+|||+|.+++.+|+. ++.+|+|+|+||.+++.+++|++.|+++ ++++++++|..++
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~---------------~~v~~~~~D~~~~ 187 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVE---------------DRMSAYNMDNRDF 187 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCT---------------TTEEEECSCTTTC
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCC---------------CcEEEEeCcHHHh
Confidence 36899999999999999999876 4579999999999999999999999983 6899999999988
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... +.||.|+.|||+.. . .++..+.+.||+||.+.+
T Consensus 188 ~~~--~~~D~Vi~~~p~~~-----------~-------------------------------~~l~~a~~~lk~gG~ih~ 223 (278)
T 3k6r_A 188 PGE--NIADRILMGYVVRT-----------H-------------------------------EFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp CCC--SCEEEEEECCCSSG-----------G-------------------------------GGHHHHHHHEEEEEEEEE
T ss_pred ccc--cCCCEEEECCCCcH-----------H-------------------------------HHHHHHHHHcCCCCEEEE
Confidence 654 38999999988752 0 346677889999999876
Q ss_pred EeC------CCCcHHHHHHHHHHCCCeEEEE
Q 043334 189 NMG------GRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 189 ~~~------~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
... .....+.+++..++.|+.....
T Consensus 224 ~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 224 HNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp EEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred EeeecccccchhHHHHHHHHHHHcCCcEEEE
Confidence 321 1233456677888999876544
No 304
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.40 E-value=4e-12 Score=133.88 Aligned_cols=127 Identities=13% Similarity=0.193 Sum_probs=98.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|++++..+++ +++++.++|+.+++
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKGV----------------ENVRFQQGTAESLP 82 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHTC----------------CSEEEEECBTTBCC
T ss_pred CCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCC----------------CCeEEEecccccCC
Confidence 57899999999999999999874 5999999999999999999987776 47999999998865
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++-.....++ ...+++++.++|||||.+++.
T Consensus 83 ~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 83 FPD-DSFDIITCRYAAHHFSD--------------------------------------VRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp SCT-TCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC-CcEEEEEECCchhhccC--------------------------------------HHHHHHHHHHHcCCCcEEEEE
Confidence 433 48999997522221110 237899999999999999984
Q ss_pred eCC------------------------CCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MGG------------------------RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~------------------------~~~~~~l~~ll~~~gf~~~~~ 213 (903)
... ......+.+++++.||..+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 171 (239)
T 1xxl_A 124 DHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDI 171 (239)
T ss_dssp EECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred EcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEE
Confidence 321 123455667788888887665
No 305
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.39 E-value=2.2e-12 Score=133.63 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=98.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|++++..++++. ...++++++++|+....
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-----------~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPE-----------MQRKRISLFQSSLVYRD 97 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCH-----------HHHTTEEEEECCSSSCC
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-----------ccCcceEEEeCcccccc
Confidence 4679999999999999999988766899999999999999999997766520 00127999999996654
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++-.... +. ......+++++.++|||||.+++.
T Consensus 98 ~~~-~~fD~V~~~~~l~~------~~------------------------------~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 98 KRF-SGYDAATVIEVIEH------LD------------------------------ENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp GGG-TTCSEEEEESCGGG------CC------------------------------HHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ccc-CCCCEEEEHHHHHh------CC------------------------------HHHHHHHHHHHHHhhCCCEEEEEc
Confidence 332 38999996522221 10 111337899999999999977764
Q ss_pred eCCC---------------------CcHHHHH----HHHHHCCCeEEEE
Q 043334 190 MGGR---------------------PGQGVCK----RLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~~---------------------~~~~~l~----~ll~~~gf~~~~~ 213 (903)
.... .....++ +++++.||++...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 141 PNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp EBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred cchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEE
Confidence 3221 1344444 7788899977554
No 306
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.39 E-value=1.3e-12 Score=147.69 Aligned_cols=140 Identities=20% Similarity=0.179 Sum_probs=103.7
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++.+ ++.+|+|+|+|+.|++.|++|+..++.... +....++++++++|+.+
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~--------g~~~~~~v~~~~~d~~~ 153 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFF--------GSPSRSNVRFLKGFIEN 153 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHH--------SSTTCCCEEEEESCTTC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcc--------cccCCCceEEEEccHHH
Confidence 467899999999999999999987 578999999999999999999875521000 00002589999999988
Q ss_pred c------ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhccc
Q 043334 108 Y------CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIK 181 (903)
Q Consensus 108 ~------~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lk 181 (903)
+ ... .++||+|++|..+...++ ...+++++.++||
T Consensus 154 l~~~~~~~~~-~~~fD~V~~~~~l~~~~d--------------------------------------~~~~l~~~~r~Lk 194 (383)
T 4fsd_A 154 LATAEPEGVP-DSSVDIVISNCVCNLSTN--------------------------------------KLALFKEIHRVLR 194 (383)
T ss_dssp GGGCBSCCCC-TTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEE
T ss_pred hhhcccCCCC-CCCEEEEEEccchhcCCC--------------------------------------HHHHHHHHHHHcC
Confidence 6 322 348999998754443221 1278999999999
Q ss_pred CCcEEEEEeCC----------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 182 PSGIMIFNMGG----------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 182 pgG~ll~~~~~----------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
|||++++.... ......+.+++++.||..++...
T Consensus 195 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 195 DGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp EEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 99999984311 12346678899999998776644
No 307
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.39 E-value=1.6e-12 Score=138.62 Aligned_cols=142 Identities=15% Similarity=0.103 Sum_probs=96.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcc----ccc-CCCCcchhhhcccCCcEEEEEcc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNA----LDE-KGQPIYDAEKKTLLDRVEFHESD 104 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~g----l~~-~~~~~~~~~~~~~~~~v~~~~gD 104 (903)
++.+|||+|||+|..+..|++. +.+|+|+|+|+.|++.|+++..... ++. .+..++. ....+++++++|
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~D 141 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFK----SSSGSISLYCCS 141 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEE----ETTSSEEEEESC
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccc----cCCCceEEEECc
Confidence 5789999999999999999987 7899999999999999987652100 000 0000000 012479999999
Q ss_pred ccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc
Q 043334 105 LLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG 184 (903)
Q Consensus 105 l~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG 184 (903)
+.++.....++||+|+++-.+...+. .. ...+++++.++|||||
T Consensus 142 ~~~l~~~~~~~FD~V~~~~~l~~l~~------~~------------------------------~~~~l~~~~~~LkpGG 185 (252)
T 2gb4_A 142 IFDLPRANIGKFDRIWDRGALVAINP------GD------------------------------HDRYADIILSLLRKEF 185 (252)
T ss_dssp TTTGGGGCCCCEEEEEESSSTTTSCG------GG------------------------------HHHHHHHHHHTEEEEE
T ss_pred cccCCcccCCCEEEEEEhhhhhhCCH------HH------------------------------HHHHHHHHHHHcCCCe
Confidence 99987643248999997644332110 00 1267999999999999
Q ss_pred EEEEEe-C----------CCCcHHHHHHHHHHCCCeEEEEE
Q 043334 185 IMIFNM-G----------GRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 185 ~ll~~~-~----------~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
++++.. . .....+.+.+++.. +|++....
T Consensus 186 ~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 186 QYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp EEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred EEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 996432 1 01345667778876 58877663
No 308
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.39 E-value=7.9e-13 Score=138.14 Aligned_cols=117 Identities=13% Similarity=0.122 Sum_probs=92.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++. ++++++++|+.+..
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---------------------~~~~~~~~d~~~~~ 104 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANA---------------------PHADVYEWNGKGEL 104 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHC---------------------TTSEEEECCSCSSC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhC---------------------CCceEEEcchhhcc
Confidence 5789999999999999999987 679999999999999999882 47899999996543
Q ss_pred cCC-CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RDH-DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~-~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+.. .++||+|++|+.. ..+++++.++|||||.++.
T Consensus 105 ~~~~~~~fD~v~~~~~~--------------------------------------------~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 105 PAGLGAPFGLIVSRRGP--------------------------------------------TSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp CTTCCCCEEEEEEESCC--------------------------------------------SGGGGGHHHHEEEEEEEEE
T ss_pred CCcCCCCEEEEEeCCCH--------------------------------------------HHHHHHHHHHcCCCcEEEE
Confidence 322 4589999986100 0457788999999999994
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.. .......+.+.+.+.||......
T Consensus 141 ~~-~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 141 VG-PRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp EE-SSSCCTHHHHHHHHTTCEEEEEE
T ss_pred eC-CcCCHHHHHHHHHHCCCeEEEEE
Confidence 33 33344455789999999987764
No 309
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.39 E-value=1.3e-12 Score=139.40 Aligned_cols=100 Identities=16% Similarity=0.306 Sum_probs=80.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++. .+++++++|+.++.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~---------------------~~~~~~~~d~~~~~ 106 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRN---------------------PDAVLHHGDMRDFS 106 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHC---------------------TTSEEEECCTTTCC
T ss_pred CCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhC---------------------CCCEEEECChHHCC
Confidence 5689999999999999999887 569999999999999999875 36899999999876
Q ss_pred cCCCCceeEEEECC-CCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RDHDIQLERIVGCI-PQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~~~~fD~Iv~Np-Py~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. .++||+|+++. .... +. ..+....+++++.++|||||.+++
T Consensus 107 ~--~~~fD~v~~~~~~l~~------~~-----------------------------~~~~~~~~l~~~~~~L~pgG~l~i 149 (263)
T 3pfg_A 107 L--GRRFSAVTCMFSSIGH------LA-----------------------------GQAELDAALERFAAHVLPDGVVVV 149 (263)
T ss_dssp C--SCCEEEEEECTTGGGG------SC-----------------------------HHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred c--cCCcCEEEEcCchhhh------cC-----------------------------CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 5 34899999753 2221 10 011234789999999999999999
Q ss_pred E
Q 043334 189 N 189 (903)
Q Consensus 189 ~ 189 (903)
.
T Consensus 150 ~ 150 (263)
T 3pfg_A 150 E 150 (263)
T ss_dssp C
T ss_pred E
Confidence 4
No 310
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.38 E-value=2.4e-12 Score=136.41 Aligned_cols=130 Identities=19% Similarity=0.302 Sum_probs=100.6
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|+++.. ..+++++++|+.++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~-------------------~~~~~~~~~d~~~~ 102 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTT-------------------SPVVCYEQKAIEDI 102 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCC-------------------CTTEEEEECCGGGC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhc-------------------cCCeEEEEcchhhC
Confidence 367899999999999999999873 3399999999999999998863 14799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+++-.....++ ...+++++.++|||||.+++
T Consensus 103 ~~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 103 AIEP-DAYNVVLSSLALHYIAS--------------------------------------FDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp CCCT-TCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCC-CCeEEEEEchhhhhhhh--------------------------------------HHHHHHHHHHHcCCCcEEEE
Confidence 5433 48999997532221110 23789999999999999999
Q ss_pred EeCCC---------------------------------------------CcHHHHHHHHHHCCCeEEEEEehh
Q 043334 189 NMGGR---------------------------------------------PGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 189 ~~~~~---------------------------------------------~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
..... .....+.++++++||+++.+....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~ 217 (253)
T 3g5l_A 144 SVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPE 217 (253)
T ss_dssp EEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCC
T ss_pred EeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCC
Confidence 53210 055677899999999999885443
No 311
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.38 E-value=4.1e-12 Score=131.85 Aligned_cols=106 Identities=22% Similarity=0.232 Sum_probs=84.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++...++ .+++++++|+.+..
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~-----------------~~~~~~~~d~~~~~ 98 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYG--FEVVGVDISEDMIRKAREYAKSRE-----------------SNVEFIVGDARKLS 98 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTT-----------------CCCEEEECCTTSCC
T ss_pred CCCeEEEEeccCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcC-----------------CCceEEECchhcCC
Confidence 47899999999999999999874 399999999999999999987654 37999999998865
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|++|++..... . .....+++++.++|||||.+++.
T Consensus 99 ~~~-~~~D~v~~~~~~~~~~----~--------------------------------~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 99 FED-KTFDYVIFIDSIVHFE----P--------------------------------LELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp SCT-TCEEEEEEESCGGGCC----H--------------------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC-CcEEEEEEcCchHhCC----H--------------------------------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 332 3899999987732111 0 01237899999999999999885
Q ss_pred eC
Q 043334 190 MG 191 (903)
Q Consensus 190 ~~ 191 (903)
..
T Consensus 142 ~~ 143 (227)
T 1ve3_A 142 FT 143 (227)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 312
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.38 E-value=4.5e-12 Score=137.67 Aligned_cols=131 Identities=17% Similarity=0.188 Sum_probs=102.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|+++....++ .++++++++|+.+.
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGL---------------ADNITVKYGSFLEI 144 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTC---------------TTTEEEEECCTTSC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCC---------------CcceEEEEcCcccC
Confidence 367899999999999999999986 56999999999999999999987776 35899999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+... ++||+|+++-.....++ ...+++++.++|||||.+++
T Consensus 145 ~~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 145 PCED-NSYDFIWSQDAFLHSPD--------------------------------------KLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp SSCT-TCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCC-CCEeEEEecchhhhcCC--------------------------------------HHHHHHHHHHHcCCCeEEEE
Confidence 5433 38999997532221111 23789999999999999998
Q ss_pred EeCC---------------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMGG---------------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~~---------------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.... ......+.+++++.||+++...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 186 TDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp EEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred EEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 4321 1134556778999999988764
No 313
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.38 E-value=1.1e-11 Score=144.11 Aligned_cols=200 Identities=12% Similarity=0.085 Sum_probs=142.8
Q ss_pred cHHHHHHHHHHHHc----cCCCCCchHHHHHHHHHHHhhcCCCCCC------CCcEEecCchHHHHHHHHHHhc------
Q 043334 630 PSLVKAAIFESFAR----QNMSESEIDVTPSIQQYIKSNFGFPIDI------NAEFIYADCSQSLFNKLVLCCI------ 693 (903)
Q Consensus 630 p~~v~~al~~al~~----y~~~~G~~~lr~ala~~l~~~~G~~~~p------e~~I~vt~Gs~~al~~ll~~l~------ 693 (903)
+..+.+.+...+.. |....+..++.+.+.+|+++.+|.+... ....++|+|++++...++.+..
T Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~ 166 (475)
T 3k40_A 87 PAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE 166 (475)
T ss_dssp HHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence 33444555555544 2233445678899999999999987531 1147777877777666655542
Q ss_pred -------------cCCCeEEEcCCCcHHHHHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCC-----CcEEEEECC
Q 043334 694 -------------LEGGTLCFPAGSNGNYVSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVK-----KPWVYISGP 755 (903)
Q Consensus 694 -------------~pGD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~-----~~~vil~~P 755 (903)
.|++.|+++.++|..+...++..|++++.+|+++ ++ +|+++|++++++.+ +.+|+++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~ 243 (475)
T 3k40_A 167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSEN--HR-MRGAALEKAIEQDVAEGLIPFYAVVTLG 243 (475)
T ss_dssp HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCBT--TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECCC--CC-cCHHHHHHHHHHHHHCCCccEEEEEEec
Confidence 1356899999999999999999999999999963 56 99999999987641 236888999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhccccc
Q 043334 756 TINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGA 835 (903)
Q Consensus 756 ~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~G 835 (903)
+ |+||.+-+ +++|.++|+++|+++++|.+|+...+..... ...+..+. ....+..|++|.++.|
T Consensus 244 ~-t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~-----~~~~~gi~------~~Ds~~~~~hK~l~~p- 307 (475)
T 3k40_A 244 T-TNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEY-----RHLMKGIE------SADSFNFNPHKWMLVN- 307 (475)
T ss_dssp C-TTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGG-----GGGGTTGG------GCSEEEECHHHHSSCC-
T ss_pred C-CCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhh-----HHHhcCcc------cCCEEEECchhccCCC-
Confidence 8 99999966 8899999999999999999997543322111 01111111 1356789999988644
Q ss_pred ceeeEEEeCcHHH
Q 043334 836 LKFGFLVLNHPQL 848 (903)
Q Consensus 836 lRiG~lv~~~~~l 848 (903)
..+|+++..+...
T Consensus 308 ~g~g~l~~~~~~~ 320 (475)
T 3k40_A 308 FDCSAMWLKDPSW 320 (475)
T ss_dssp SSCEEEEESSGGG
T ss_pred CceEEEEEeCHHH
Confidence 5678888876533
No 314
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.38 E-value=1.6e-12 Score=137.67 Aligned_cols=133 Identities=14% Similarity=0.218 Sum_probs=96.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc--------ccccCCCCcchhhhcccCCcEEEE
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN--------ALDEKGQPIYDAEKKTLLDRVEFH 101 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~--------gl~~~~~~~~~~~~~~~~~~v~~~ 101 (903)
++.+|||+|||+|.+++.+++..+..+|+|+|+|+.+++.|++|+..+ ++ +++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~----------------~nv~~~ 112 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF----------------QNINVL 112 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT----------------TTEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC----------------CcEEEE
Confidence 567999999999999999999988789999999999999999998776 43 479999
Q ss_pred Ecccccccc--CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhc
Q 043334 102 ESDLLAYCR--DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGV 179 (903)
Q Consensus 102 ~gDl~~~~~--~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~ 179 (903)
++|+.+... ...+.+|.|+.+.|.-....... ... .+ ...+++++.++
T Consensus 113 ~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~----~~r--------------~~------------~~~~l~~~~~~ 162 (246)
T 2vdv_E 113 RGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKH----KAR--------------II------------TNTLLSEYAYV 162 (246)
T ss_dssp ECCTTSCGGGTSCTTCEEEEEEESCCCC----------CSS--------------CC------------CHHHHHHHHHH
T ss_pred eccHHHHHHHhccccccCEEEEECCCcccccchh----HHh--------------hc------------cHHHHHHHHHH
Confidence 999987432 22348999986633211100000 000 00 12789999999
Q ss_pred ccCCcEEEEEeCCCCcHHHHHHHHHHCCC
Q 043334 180 IKPSGIMIFNMGGRPGQGVCKRLFERRGF 208 (903)
Q Consensus 180 LkpgG~ll~~~~~~~~~~~l~~ll~~~gf 208 (903)
|+|||.+++.+........+.+.+.+.++
T Consensus 163 LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 163 LKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred cCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 99999999977665444555566777764
No 315
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.38 E-value=3.6e-12 Score=128.09 Aligned_cols=124 Identities=23% Similarity=0.273 Sum_probs=100.7
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.+++|+..+++ .+++++.++|+.+.
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~---------------~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGL---------------GDNVTLMEGDAPEA 94 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTC---------------CTTEEEEESCHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCC---------------CcceEEEecCHHHh
Confidence 357899999999999999999874 8999999999999999999987775 25799999999884
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+++.++. . +..+++++.++|+|||.+++
T Consensus 95 ~~~~-~~~D~v~~~~~~~------~-----------------------------------~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 95 LCKI-PDIDIAVVGGSGG------E-----------------------------------LQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp HTTS-CCEEEEEESCCTT------C-----------------------------------HHHHHHHHHHTEEEEEEEEE
T ss_pred cccC-CCCCEEEECCchH------H-----------------------------------HHHHHHHHHHhcCCCcEEEE
Confidence 3332 2899999875531 0 12679999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEE
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVD 211 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~ 211 (903)
..........+.+.+++.||...
T Consensus 133 ~~~~~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 133 TAILLETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp EECBHHHHHHHHHHHHHTTCCCE
T ss_pred EecCcchHHHHHHHHHHCCCceE
Confidence 87766566666788999998543
No 316
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.38 E-value=1.4e-12 Score=137.61 Aligned_cols=140 Identities=13% Similarity=0.107 Sum_probs=94.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||||||+|.+++.+|+..|+.+|+|+|+|+.|++.|++++...... ......++.++++|+.+..
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~----------~~~~~~nv~~~~~d~~~~l 115 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAA----------PAGGFQNIACLRSNAMKHL 115 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHS----------TTCCCTTEEEEECCTTTCH
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHH----------HhcCCCeEEEEECcHHHhh
Confidence 456899999999999999999988899999999999999999987542100 0001258999999998732
Q ss_pred c--CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 110 R--DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 110 ~--~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
. ...++||.|+.|.|--.....+ .... + ....+++++.++|||||.++
T Consensus 116 ~~~~~~~~~D~v~~~~~dp~~k~~h----~krr---------------~-----------~~~~~l~~~~~~LkpGG~l~ 165 (235)
T 3ckk_A 116 PNFFYKGQLTKMFFLFPDPHFKRTK----HKWR---------------I-----------ISPTLLAEYAYVLRVGGLVY 165 (235)
T ss_dssp HHHCCTTCEEEEEEESCC------------------------------C-----------CCHHHHHHHHHHEEEEEEEE
T ss_pred hhhCCCcCeeEEEEeCCCchhhhhh----hhhh---------------h-----------hhHHHHHHHHHHCCCCCEEE
Confidence 2 1234899998763311000000 0000 0 01268999999999999999
Q ss_pred EEeCCCCcHHHHHHHHHHCC-Ce
Q 043334 188 FNMGGRPGQGVCKRLFERRG-FR 209 (903)
Q Consensus 188 ~~~~~~~~~~~l~~ll~~~g-f~ 209 (903)
+.+..........+.+.+.+ |.
T Consensus 166 ~~td~~~~~~~~~~~l~~~~~f~ 188 (235)
T 3ckk_A 166 TITDVLELHDWMCTHFEEHPLFE 188 (235)
T ss_dssp EEESCHHHHHHHHHHHHTSTTEE
T ss_pred EEeCCHHHHHHHHHHHHHCCCcc
Confidence 98766444444455666665 44
No 317
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.37 E-value=7.6e-12 Score=141.02 Aligned_cols=129 Identities=19% Similarity=0.218 Sum_probs=102.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+| |+|.+++.++...+..+|+|+|+|+.|++.|++|+..+|+ .+++++++|+.+..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~----------------~~v~~~~~D~~~~l 234 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY----------------EDIEIFTFDLRKPL 234 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC----------------CCEEEECCCTTSCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----------------CCEEEEEChhhhhc
Confidence 578999999 9999999999876657999999999999999999988876 37999999998833
Q ss_pred cC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc-EEE
Q 043334 110 RD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG-IMI 187 (903)
Q Consensus 110 ~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG-~ll 187 (903)
+. ..++||+|++||||... . ...+++++.++||||| .++
T Consensus 235 ~~~~~~~fD~Vi~~~p~~~~-------~--------------------------------~~~~l~~~~~~LkpgG~~~~ 275 (373)
T 2qm3_A 235 PDYALHKFDTFITDPPETLE-------A--------------------------------IRAFVGRGIATLKGPRCAGY 275 (373)
T ss_dssp CTTTSSCBSEEEECCCSSHH-------H--------------------------------HHHHHHHHHHTBCSTTCEEE
T ss_pred hhhccCCccEEEECCCCchH-------H--------------------------------HHHHHHHHHHHcccCCeEEE
Confidence 22 23489999999998731 0 1278999999999999 446
Q ss_pred EEeCC-CCcH---HHHHHHHH-HCCCeEEEEE
Q 043334 188 FNMGG-RPGQ---GVCKRLFE-RRGFRVDKLW 214 (903)
Q Consensus 188 ~~~~~-~~~~---~~l~~ll~-~~gf~~~~~~ 214 (903)
+.+.. .... ..+.+.+. +.||.....+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 276 FGITRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred EEEecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 66655 2333 45566777 8898876654
No 318
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.37 E-value=5e-12 Score=136.38 Aligned_cols=147 Identities=14% Similarity=0.180 Sum_probs=104.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..+++..++ .+|+|+|+|+.+++.+++|+..+|+ .+++++++|+.++
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~----------------~~v~~~~~D~~~~ 146 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV----------------LNTIIINADMRKY 146 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC----------------CSEEEEESCHHHH
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC----------------CcEEEEeCChHhc
Confidence 5789999999999999999998766 7999999999999999999998886 4799999999887
Q ss_pred ccC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 109 CRD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 109 ~~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
... ..++||+|++|||+.........+ .+..+.. .........+++.+.++|||||.
T Consensus 147 ~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p----~~~~~~~----------------~~~~~~~~~~l~~~~~~LkpgG~ 206 (274)
T 3ajd_A 147 KDYLLKNEIFFDKILLDAPCSGNIIKDKNR----NVSEEDI----------------KYCSLRQKELIDIGIDLLKKDGE 206 (274)
T ss_dssp HHHHHHTTCCEEEEEEEECCC----------------HHHH----------------TGGGTCHHHHHHHHHHHEEEEEE
T ss_pred chhhhhccccCCEEEEcCCCCCCcccccCC----CCCHHHH----------------HHHHHHHHHHHHHHHHhCCCCCE
Confidence 541 123899999999997533211100 0000000 00111234889999999999999
Q ss_pred EEEEeCCC---CcHHHHHHHHHHC-CCeEEE
Q 043334 186 MIFNMGGR---PGQGVCKRLFERR-GFRVDK 212 (903)
Q Consensus 186 ll~~~~~~---~~~~~l~~ll~~~-gf~~~~ 212 (903)
+++.+... .....++..++++ +|+...
T Consensus 207 lv~stcs~~~~ene~~v~~~l~~~~~~~~~~ 237 (274)
T 3ajd_A 207 LVYSTCSMEVEENEEVIKYILQKRNDVELII 237 (274)
T ss_dssp EEEEESCCCTTSSHHHHHHHHHHCSSEEEEC
T ss_pred EEEEECCCChHHhHHHHHHHHHhCCCcEEec
Confidence 99965533 4566667777665 466543
No 319
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.37 E-value=3e-12 Score=135.77 Aligned_cols=127 Identities=17% Similarity=0.179 Sum_probs=102.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-ccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLN-ALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~-gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
.++.+|||+|||+|.++..+++.. ++.+|+++|+++.+++.|++|+..+ +. +++++.++|+.
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~----------------~~v~~~~~d~~ 158 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV----------------ENVRFHLGKLE 158 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC----------------CCEEEEESCGG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC----------------CCEEEEECchh
Confidence 467899999999999999999984 4689999999999999999999776 64 58999999998
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+..... ++||+|++|+|.. ..+++++.++|+|||.+
T Consensus 159 ~~~~~~-~~~D~v~~~~~~~-------------------------------------------~~~l~~~~~~L~~gG~l 194 (258)
T 2pwy_A 159 EAELEE-AAYDGVALDLMEP-------------------------------------------WKVLEKAALALKPDRFL 194 (258)
T ss_dssp GCCCCT-TCEEEEEEESSCG-------------------------------------------GGGHHHHHHHEEEEEEE
T ss_pred hcCCCC-CCcCEEEECCcCH-------------------------------------------HHHHHHHHHhCCCCCEE
Confidence 873332 3799999875522 04588899999999999
Q ss_pred EEEeCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 187 IFNMGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 187 l~~~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
++..........+.+.+++.||...+.+.
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 195 VAYLPNITQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp EEEESCHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred EEEeCCHHHHHHHHHHHHHCCCceEEEEE
Confidence 99887654444556678889998877654
No 320
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.36 E-value=1.2e-11 Score=133.54 Aligned_cols=130 Identities=15% Similarity=0.155 Sum_probs=99.7
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...++ .+++++..+|+.++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~---------------~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSEN---------------LRSKRVLLAGWEQF 126 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCC---------------CSCEEEEESCGGGC
T ss_pred CCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCC---------------CCCeEEEECChhhC
Confidence 467899999999999999999776 46999999999999999999977665 35899999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+ ++||+|+++-.....+. .....+++++.++|||||.+++
T Consensus 127 ~----~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 127 D----EPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp C----CCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHSCTTCEEEE
T ss_pred C----CCeeEEEEeCchhhcCh------------------------------------HHHHHHHHHHHHhcCCCCEEEE
Confidence 4 38999996532221110 0123789999999999999998
Q ss_pred EeCC----------------------------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMGG----------------------------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~~----------------------------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.... .+....+.+++++.||+++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 226 (287)
T 1kpg_A 167 HTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQ 226 (287)
T ss_dssp EEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEE
T ss_pred EEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEE
Confidence 4321 1234566778888899887763
No 321
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.36 E-value=1.7e-12 Score=135.91 Aligned_cols=136 Identities=16% Similarity=0.103 Sum_probs=98.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCC-HHHHHHH---HHHHHhcccccCCCCcchhhhcccCCcEEEEEccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDIN-PRAIRIS---WINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDL 105 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis-~~al~~A---~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl 105 (903)
++.+|||+|||+|.++..+++..++.+|+|+|+| +.|++.| ++++...++ .++.+.++|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~----------------~~v~~~~~d~ 87 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL----------------SNVVFVIAAA 87 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC----------------SSEEEECCBT
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC----------------CCeEEEEcCH
Confidence 5679999999999999999988788899999999 7777776 777766665 4799999999
Q ss_pred cccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 106 LAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 106 ~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
.+++......+|.|.+|+|+.. ....... ....+++++.++|||||.
T Consensus 88 ~~l~~~~~d~v~~i~~~~~~~~------~~~~~~~---------------------------~~~~~l~~~~r~LkpGG~ 134 (225)
T 3p2e_A 88 ESLPFELKNIADSISILFPWGT------LLEYVIK---------------------------PNRDILSNVADLAKKEAH 134 (225)
T ss_dssp TBCCGGGTTCEEEEEEESCCHH------HHHHHHT---------------------------TCHHHHHHHHTTEEEEEE
T ss_pred HHhhhhccCeEEEEEEeCCCcH------Hhhhhhc---------------------------chHHHHHHHHHhcCCCcE
Confidence 8874322237899998887652 0000000 012679999999999999
Q ss_pred EEEEeC--C-------------CCcHH-----HHHHHHHHCCCeEEEEE
Q 043334 186 MIFNMG--G-------------RPGQG-----VCKRLFERRGFRVDKLW 214 (903)
Q Consensus 186 ll~~~~--~-------------~~~~~-----~l~~ll~~~gf~~~~~~ 214 (903)
+++... . ..... .+.+.+++.||.+....
T Consensus 135 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~ 183 (225)
T 3p2e_A 135 FEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVK 183 (225)
T ss_dssp EEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeee
Confidence 998221 1 01111 26778899999987663
No 322
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.36 E-value=2.4e-12 Score=143.51 Aligned_cols=139 Identities=14% Similarity=0.217 Sum_probs=99.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-----CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-----SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESD 104 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-----~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gD 104 (903)
++.+|||+|||+|.+++.+++..+. .+++|+|+++.+++.|+.|+..+|+ ++.++++|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-----------------~~~i~~~D 192 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-----------------KMTLLHQD 192 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-----------------CCEEEESC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-----------------CceEEECC
Confidence 4679999999999999999988754 6899999999999999999987765 58899999
Q ss_pred ccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccH-HHHHHHHHHHhhcccCC
Q 043334 105 LLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGL-GLIARAVEEGIGVIKPS 183 (903)
Q Consensus 105 l~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~-~~~~~~l~~~~~~Lkpg 183 (903)
.+..... .+||+|++||||...+... ....+.+ . ...|. .....+++.+.+.|+||
T Consensus 193 ~l~~~~~--~~fD~Ii~NPPfg~~~~~~----~~~~~~~--------------~---~~~g~~~~~~~~l~~~~~~Lk~g 249 (344)
T 2f8l_A 193 GLANLLV--DPVDVVISDLPVGYYPDDE----NAKTFEL--------------C---REEGHSFAHFLFIEQGMRYTKPG 249 (344)
T ss_dssp TTSCCCC--CCEEEEEEECCCSEESCHH----HHTTSTT--------------C---CSSSCEEHHHHHHHHHHHTEEEE
T ss_pred CCCcccc--CCccEEEECCCCCCcCchh----hhhhccc--------------c---CCCCcchHHHHHHHHHHHHhCCC
Confidence 8875432 3899999999975322110 0001100 0 00111 12336899999999999
Q ss_pred cEEEEEeC-----CCCcHHHHHHHHHHCCCe
Q 043334 184 GIMIFNMG-----GRPGQGVCKRLFERRGFR 209 (903)
Q Consensus 184 G~ll~~~~-----~~~~~~~l~~ll~~~gf~ 209 (903)
|++++.++ ... ...+++++.+.|+.
T Consensus 250 G~~~~v~p~~~~~~~~-~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 250 GYLFFLVPDAMFGTSD-FAKVDKFIKKNGHI 279 (344)
T ss_dssp EEEEEEEEGGGGGSTT-HHHHHHHHHHHEEE
T ss_pred CEEEEEECchhcCCch-HHHHHHHHHhCCeE
Confidence 99999873 333 34556777777753
No 323
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.36 E-value=1.7e-12 Score=136.37 Aligned_cols=144 Identities=13% Similarity=0.098 Sum_probs=96.5
Q ss_pred hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhc
Q 043334 13 WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKK 92 (903)
Q Consensus 13 w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~ 92 (903)
|...+...+.... ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++...++
T Consensus 45 ~~~~~~~~l~~~~--~~~~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~-------------- 107 (236)
T 1zx0_A 45 WETPYMHALAAAA--SSKGGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQT-------------- 107 (236)
T ss_dssp GGHHHHHHHHHHH--TTTCEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCS--------------
T ss_pred HHHHHHHHHHhhc--CCCCCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhcC--------------
Confidence 5544444433321 125789999999999999999764 34599999999999999999876554
Q ss_pred ccCCcEEEEEcccccc--ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHH
Q 043334 93 TLLDRVEFHESDLLAY--CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIA 170 (903)
Q Consensus 93 ~~~~~v~~~~gDl~~~--~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~ 170 (903)
.+++++++|+.+. ... +++||+|++| .+.. .... .......
T Consensus 108 ---~~v~~~~~d~~~~~~~~~-~~~fD~V~~d-~~~~--~~~~------------------------------~~~~~~~ 150 (236)
T 1zx0_A 108 ---HKVIPLKGLWEDVAPTLP-DGHFDGILYD-TYPL--SEET------------------------------WHTHQFN 150 (236)
T ss_dssp ---SEEEEEESCHHHHGGGSC-TTCEEEEEEC-CCCC--BGGG------------------------------TTTHHHH
T ss_pred ---CCeEEEecCHHHhhcccC-CCceEEEEEC-Cccc--chhh------------------------------hhhhhHH
Confidence 3799999999887 333 2489999974 1110 0000 0011234
Q ss_pred HHHHHHhhcccCCcEEEEEeCCC---------C-----cHHHHHHHHHHCCCeE
Q 043334 171 RAVEEGIGVIKPSGIMIFNMGGR---------P-----GQGVCKRLFERRGFRV 210 (903)
Q Consensus 171 ~~l~~~~~~LkpgG~ll~~~~~~---------~-----~~~~l~~ll~~~gf~~ 210 (903)
.+++++.++|||||++++..... . ........+.+.||..
T Consensus 151 ~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 151 FIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp HHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred HHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 67999999999999999742110 0 0122245788899973
No 324
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.36 E-value=7.8e-12 Score=132.85 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=100.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|+++.... ++++++++|+.+.
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------------------~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN------------------NKIIFEANDILTK 114 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC------------------TTEEEEECCTTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC------------------CCeEEEECccccC
Confidence 467899999999999999999987 689999999999999999876322 4799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+... ++||+|+++-.... + +......+++++.++|||||.+++
T Consensus 115 ~~~~-~~fD~v~~~~~l~~------~------------------------------~~~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 115 EFPE-NNFDLIYSRDAILA------L------------------------------SLENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp CCCT-TCEEEEEEESCGGG------S------------------------------CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCC-CcEEEEeHHHHHHh------c------------------------------ChHHHHHHHHHHHHHcCCCCEEEE
Confidence 5433 48999997532221 1 012234789999999999999998
Q ss_pred EeC---------------------CCCcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMG---------------------GRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~---------------------~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... .......+.+++++.||+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 158 TDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 542 12345667889999999988764
No 325
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.36 E-value=5.2e-12 Score=132.51 Aligned_cols=127 Identities=23% Similarity=0.260 Sum_probs=99.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. . ..+++++++|+.+..
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---~----------------~~~~~~~~~d~~~~~ 111 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG---E----------------GPDLSFIKGDLSSLP 111 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT---C----------------BTTEEEEECBTTBCS
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc---c----------------cCCceEEEcchhcCC
Confidence 6789999999999999999987 679999999999999998764 1 247999999999876
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++-.....++ ...+++++.++|+|||.+++.
T Consensus 112 ~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 112 FEN-EQFEAIMAINSLEWTEE--------------------------------------PLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp SCT-TCEEEEEEESCTTSSSC--------------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC-CCccEEEEcChHhhccC--------------------------------------HHHHHHHHHHHhCCCeEEEEE
Confidence 433 48999997643332111 126799999999999999996
Q ss_pred eCC---------------------CCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MGG---------------------RPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~~---------------------~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
... ......+++++++.||+++.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 153 ILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp EECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred EcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 521 134456788999999999887543
No 326
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.36 E-value=4.2e-12 Score=138.31 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=83.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++++...+++ +..+++++++|+.++.
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPAD-------------VRDRCTLVQGDMSAFA 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHH-------------HHTTEEEEECBTTBCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccc-------------cccceEEEeCchhcCC
Confidence 3459999999999999999987 689999999999999999998765420 0147999999999876
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.. ++||+|++.. ....+. ..+....+++++.++|||||.+++.
T Consensus 147 ~~--~~fD~v~~~~-------------~~~~~~----------------------~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 147 LD--KRFGTVVISS-------------GSINEL----------------------DEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp CS--CCEEEEEECH-------------HHHTTS----------------------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cC--CCcCEEEECC-------------cccccC----------------------CHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 53 4899988420 011110 1122348899999999999999995
Q ss_pred e
Q 043334 190 M 190 (903)
Q Consensus 190 ~ 190 (903)
.
T Consensus 190 ~ 190 (299)
T 3g2m_A 190 L 190 (299)
T ss_dssp E
T ss_pred e
Confidence 4
No 327
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.36 E-value=8.7e-12 Score=127.30 Aligned_cols=126 Identities=13% Similarity=0.065 Sum_probs=97.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++ +|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++...++. ++.++++|+.+..
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-----------------~~~~~~~d~~~~~ 89 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGV-----------------KITTVQSNLADFD 89 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTC-----------------CEEEECCBTTTBS
T ss_pred CC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCC-----------------ceEEEEcChhhcC
Confidence 45 9999999999999999886 67999999999999999999876653 6999999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++..+. . .+....+++++.++|||||.+++.
T Consensus 90 ~~~-~~fD~v~~~~~~~--------~------------------------------~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 IVA-DAWEGIVSIFCHL--------P------------------------------SSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp CCT-TTCSEEEEECCCC--------C------------------------------HHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred CCc-CCccEEEEEhhcC--------C------------------------------HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 332 4899999753221 0 011337899999999999999996
Q ss_pred eCC----------------CCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MGG----------------RPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~~----------------~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
... ......++++++ ||+++.....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 131 GFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp EECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred EeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEE
Confidence 421 235567777887 9998877543
No 328
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.35 E-value=2.9e-12 Score=133.79 Aligned_cols=121 Identities=11% Similarity=0.101 Sum_probs=90.8
Q ss_pred hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhh
Q 043334 13 WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEK 91 (903)
Q Consensus 13 w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~ 91 (903)
....++..+..... ..++.+|||+|||+|..++.+++.++ +.+|+++|+|+++++.|++|+..++++
T Consensus 40 ~~~~~l~~l~~~~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----------- 107 (221)
T 3dr5_A 40 MTGQLLTTLAATTN-GNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS----------- 107 (221)
T ss_dssp HHHHHHHHHHHHSC-CTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC-----------
T ss_pred HHHHHHHHHHHhhC-CCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----------
Confidence 33444444443322 11234999999999999999999875 689999999999999999999888761
Q ss_pred cccCCcEEEEEccccccccCC-CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHH
Q 043334 92 KTLLDRVEFHESDLLAYCRDH-DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIA 170 (903)
Q Consensus 92 ~~~~~~v~~~~gDl~~~~~~~-~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~ 170 (903)
.++++++++|+.+..... .++||+|+.+.+.. .+.
T Consensus 108 ---~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~~-----------------------------------------~~~ 143 (221)
T 3dr5_A 108 ---PSRVRFLLSRPLDVMSRLANDSYQLVFGQVSPM-----------------------------------------DLK 143 (221)
T ss_dssp ---GGGEEEECSCHHHHGGGSCTTCEEEEEECCCTT-----------------------------------------THH
T ss_pred ---cCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcHH-----------------------------------------HHH
Confidence 148999999998875432 34899998643210 022
Q ss_pred HHHHHHhhcccCCcEEEEE
Q 043334 171 RAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 171 ~~l~~~~~~LkpgG~ll~~ 189 (903)
.+++++.++|||||++++.
T Consensus 144 ~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 144 ALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp HHHHHHHHHEEEEEEEEET
T ss_pred HHHHHHHHHcCCCcEEEEe
Confidence 6789999999999999983
No 329
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.35 E-value=4.4e-12 Score=133.03 Aligned_cols=123 Identities=15% Similarity=0.075 Sum_probs=95.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. .+++++++|+.+..
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~--------------------~~v~~~~~d~~~~~ 99 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLK--------------------DGITYIHSRFEDAQ 99 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSC--------------------SCEEEEESCGGGCC
T ss_pred CCCcEEEECCCCCHHHHHHHHh--CCcEEEEeCCHHHHHHHHHhhh--------------------CCeEEEEccHHHcC
Confidence 5678999999999999999987 4589999999999999998751 26999999998874
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHh-hcccCCcEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGI-GVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~-~~LkpgG~ll~ 188 (903)
. +++||+|+++-... +.++ ...+++++. ++|||||.+++
T Consensus 100 ~--~~~fD~v~~~~~l~--------------~~~~------------------------~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 100 L--PRRYDNIVLTHVLE--------------HIDD------------------------PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp C--SSCEEEEEEESCGG--------------GCSS------------------------HHHHHHHHHHTTEEEEEEEEE
T ss_pred c--CCcccEEEEhhHHH--------------hhcC------------------------HHHHHHHHHHHhcCCCCEEEE
Confidence 3 34899999642111 1000 137899999 99999999999
Q ss_pred EeCCC--------------------------------CcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMGGR--------------------------------PGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~~~--------------------------------~~~~~l~~ll~~~gf~~~~~~ 214 (903)
..... .....+++++++.||++++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 140 VCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp EEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 65321 245567788999999988774
No 330
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.35 E-value=4.6e-12 Score=137.21 Aligned_cols=117 Identities=13% Similarity=0.218 Sum_probs=85.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+.. ....++.+..+|+.++.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~------------~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKE------------PAFDKWVIEEANWLTLD 122 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTS------------HHHHTCEEEECCGGGHH
T ss_pred CCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccc------------cccceeeEeecChhhCc
Confidence 4689999999999999999987 569999999999999999987544321 00136889999998875
Q ss_pred ---cCCCCceeEEEEC-CCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 110 ---RDHDIQLERIVGC-IPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 110 ---~~~~~~fD~Iv~N-pPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
... ++||+|+++ ..+...++. ....+....++++++++|||||+
T Consensus 123 ~~~~~~-~~fD~V~~~g~~l~~~~~~-------------------------------~~~~~~~~~~l~~~~~~LkpgG~ 170 (293)
T 3thr_A 123 KDVPAG-DGFDAVICLGNSFAHLPDS-------------------------------KGDQSEHRLALKNIASMVRPGGL 170 (293)
T ss_dssp HHSCCT-TCEEEEEECTTCGGGSCCS-------------------------------SSSSHHHHHHHHHHHHTEEEEEE
T ss_pred cccccC-CCeEEEEEcChHHhhcCcc-------------------------------ccCHHHHHHHHHHHHHHcCCCeE
Confidence 232 389999975 222211110 00112234789999999999999
Q ss_pred EEEEeCC
Q 043334 186 MIFNMGG 192 (903)
Q Consensus 186 ll~~~~~ 192 (903)
+++....
T Consensus 171 l~~~~~~ 177 (293)
T 3thr_A 171 LVIDHRN 177 (293)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9998764
No 331
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.35 E-value=9.8e-12 Score=140.55 Aligned_cols=135 Identities=15% Similarity=0.132 Sum_probs=103.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++|+..|++ ++++++++|+.+..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~----------------~~~~~~~~d~~~~~ 270 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGL----------------GNVRVLEANAFDLL 270 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTC----------------TTEEEEESCHHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC----------------CCceEEECCHHHHH
Confidence 4689999999999999999987 67999999999999999999999987 35999999998875
Q ss_pred cC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 110 RD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 110 ~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
.. ...+||+|++|||++...... .. .....+..++..+.++|+|||.+
T Consensus 271 ~~~~~~~~~fD~Ii~dpP~~~~~~~~-~~----------------------------~~~~~~~~~l~~~~~~LkpgG~l 321 (382)
T 1wxx_A 271 RRLEKEGERFDLVVLDPPAFAKGKKD-VE----------------------------RAYRAYKEVNLRAIKLLKEGGIL 321 (382)
T ss_dssp HHHHHTTCCEEEEEECCCCSCCSTTS-HH----------------------------HHHHHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHhcCCCeeEEEECCCCCCCChhH-HH----------------------------HHHHHHHHHHHHHHHhcCCCCEE
Confidence 42 123899999999997644321 11 11233558899999999999999
Q ss_pred EEEeCCCC-cH----HHHHHHHHHCCCeEE
Q 043334 187 IFNMGGRP-GQ----GVCKRLFERRGFRVD 211 (903)
Q Consensus 187 l~~~~~~~-~~----~~l~~ll~~~gf~~~ 211 (903)
++...... .. ..+++.+.+.|....
T Consensus 322 ~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 351 (382)
T 1wxx_A 322 ATASCSHHMTEPLFYAMVAEAAQDAHRLLR 351 (382)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 99765432 22 333455667775443
No 332
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.35 E-value=3.8e-12 Score=133.69 Aligned_cols=104 Identities=18% Similarity=0.162 Sum_probs=86.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..++.+++..++.+|+|+|+++.+++.|++++...++ .++++++++|+.+..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~ 135 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF---------------ENQVRIIEGNALEQF 135 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC---------------TTTEEEEESCGGGCH
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCcEEEEECCHHHHH
Confidence 46899999999999999999977788999999999999999999988876 258999999998865
Q ss_pred c-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 R-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ...++||+|+++.+.. .+..+++.+.++|||||++++
T Consensus 136 ~~~~~~~fD~V~~~~~~~-----------------------------------------~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 136 ENVNDKVYDMIFIDAAKA-----------------------------------------QSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp HHHTTSCEEEEEEETTSS-----------------------------------------SHHHHHHHHGGGEEEEEEEEE
T ss_pred HhhccCCccEEEEcCcHH-----------------------------------------HHHHHHHHHHHhcCCCeEEEE
Confidence 4 2234899999653211 023679999999999999998
Q ss_pred E
Q 043334 189 N 189 (903)
Q Consensus 189 ~ 189 (903)
.
T Consensus 175 d 175 (232)
T 3ntv_A 175 D 175 (232)
T ss_dssp E
T ss_pred e
Confidence 4
No 333
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.34 E-value=7.4e-12 Score=126.96 Aligned_cols=126 Identities=21% Similarity=0.220 Sum_probs=96.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..+++ +++++.++|+.+..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~----------------~~~~~~~~d~~~~~ 93 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENL----------------DNLHTRVVDLNNLT 93 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTC----------------TTEEEEECCGGGCC
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCC----------------CCcEEEEcchhhCC
Confidence 5679999999999999999987 67999999999999999999977765 47999999998876
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. .++||+|+++.++...+. +....+++++.++|||||.+++.
T Consensus 94 ~--~~~~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 94 F--DRQYDFILSTVVLMFLEA------------------------------------KTIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp C--CCCEEEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred C--CCCceEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCeEEEEE
Confidence 5 348999998754432110 01237899999999999998774
Q ss_pred eC-------------CCCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MG-------------GRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~-------------~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.. .....+.+++++++ |+++..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 136 AAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKY 170 (199)
T ss_dssp EEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred EeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEe
Confidence 31 12244566677765 887766
No 334
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.34 E-value=1.3e-11 Score=142.32 Aligned_cols=194 Identities=16% Similarity=0.228 Sum_probs=121.2
Q ss_pred cccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHh-------------CCCEEEEEeCCHHHHHHHHHH
Q 043334 7 IFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKW-------------LPSKVYGLDINPRAIRISWIN 73 (903)
Q Consensus 7 vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~-------------~~~~V~giDis~~al~~A~~n 73 (903)
.|.|+.-...+.+.+.. .++.+|||+|||||.+.+.+++.. +..+++|+|+++.+++.|+.|
T Consensus 153 fyTP~~v~~~mv~~l~~-----~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~n 227 (445)
T 2okc_A 153 YFTPRPLIQAMVDCINP-----QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMN 227 (445)
T ss_dssp GCCCHHHHHHHHHHHCC-----CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHhCC-----CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHH
Confidence 46787544444454432 246799999999999999988764 346899999999999999999
Q ss_pred HHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccc
Q 043334 74 LYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNY 153 (903)
Q Consensus 74 ~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 153 (903)
+..+|++ ..++.+.++|.+...... +||+|++||||......... ... ..+
T Consensus 228 l~l~g~~--------------~~~~~i~~gD~l~~~~~~--~fD~Iv~NPPf~~~~~~~~~---~~~---~~~------- 278 (445)
T 2okc_A 228 LYLHGIG--------------TDRSPIVCEDSLEKEPST--LVDVILANPPFGTRPAGSVD---INR---PDF------- 278 (445)
T ss_dssp HHHTTCC--------------SSCCSEEECCTTTSCCSS--CEEEEEECCCSSCCCTTCCC---CCC---TTS-------
T ss_pred HHHhCCC--------------cCCCCEeeCCCCCCcccC--CcCEEEECCCCCCcccccch---hhH---hhc-------
Confidence 9888762 015778999998765433 89999999999965432110 000 000
Q ss_pred ccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCC-----CcHHHHHH-HHHHCCCeEEEEEehhhhccCCCccc
Q 043334 154 CALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGR-----PGQGVCKR-LFERRGFRVDKLWQTKILQASEPFFA 227 (903)
Q Consensus 154 ~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~-----~~~~~l~~-ll~~~gf~~~~~~~~~~~~~~~~~~~ 227 (903)
.. ..+. ....+++.+.++|||||++.+.++.. .....+++ ++++.++..+.. .....|
T Consensus 279 -~~------~~~~-~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~~l~~ii~-------lp~~~F- 342 (445)
T 2okc_A 279 -YV------ETKN-NQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQDFNLHTILR-------LPTGIF- 342 (445)
T ss_dssp -SS------CCSC-HHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHEEEEEEEE-------CCSSSS-
T ss_pred -CC------CCcc-hHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHhcCcEEEEEe-------CCCCCc-
Confidence 00 0000 12378999999999999999876421 12233444 555544443322 122233
Q ss_pred CCCCcce-eeeeeccCCcceeEEe
Q 043334 228 SDTDISA-LVEIEKNSPHRFEFFM 250 (903)
Q Consensus 228 ~~~~i~~-l~~~e~~~~~~f~f~~ 250 (903)
..+.+.. ++.+.++...+-.+|.
T Consensus 343 ~~t~v~t~Il~~~k~~~~~~v~~~ 366 (445)
T 2okc_A 343 YAQGVKANVLFFSKGQPTKEIWFY 366 (445)
T ss_dssp SSTTCCEEEEEEEESSCCSEEEEE
T ss_pred cCCCCCEEEEEEECCCCCceEEEE
Confidence 3445544 5566665543333343
No 335
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.34 E-value=4e-12 Score=139.24 Aligned_cols=142 Identities=15% Similarity=0.097 Sum_probs=102.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||+|.++..+++..+..+|+++|+|+.+++.|++++...+. ....++++++.+|+.++.
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~------------~~~~~~v~~~~~D~~~~~ 162 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR------------SLADPRATVRVGDGLAFV 162 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG------------GGGCTTEEEEESCHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc------------ccCCCcEEEEECcHHHHH
Confidence 56899999999999999999876678999999999999999998742110 001358999999998876
Q ss_pred cC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.. ..++||+|++|++....+.... . ...+++++.++|||||++++
T Consensus 163 ~~~~~~~fDvIi~d~~~~~~~~~~l-----------------------~-----------~~~~l~~~~~~LkpgG~lv~ 208 (304)
T 3bwc_A 163 RQTPDNTYDVVIIDTTDPAGPASKL-----------------------F-----------GEAFYKDVLRILKPDGICCN 208 (304)
T ss_dssp HSSCTTCEEEEEEECC--------------------------------C-----------CHHHHHHHHHHEEEEEEEEE
T ss_pred HhccCCceeEEEECCCCccccchhh-----------------------h-----------HHHHHHHHHHhcCCCcEEEE
Confidence 43 2348999999876542211000 0 02789999999999999999
Q ss_pred EeCCCC----cHHHHHHHHHHCCCeEEEEEehh
Q 043334 189 NMGGRP----GQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 189 ~~~~~~----~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
..+... ....+.+.+++.||..+..+...
T Consensus 209 ~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~ 241 (304)
T 3bwc_A 209 QGESIWLDLELIEKMSRFIRETGFASVQYALMH 241 (304)
T ss_dssp EECCTTTCHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred ecCCcccchHHHHHHHHHHHhCCCCcEEEEEee
Confidence 876532 23445678888999988775544
No 336
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.34 E-value=6.6e-12 Score=129.86 Aligned_cols=124 Identities=20% Similarity=0.223 Sum_probs=96.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. .+++++++|+.++.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~--------------------~~~~~~~~d~~~~~ 102 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP--------------------KEFSITEGDFLSFE 102 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC--------------------TTCCEESCCSSSCC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC--------------------CceEEEeCChhhcC
Confidence 5689999999999999999987 6899999999999999998762 36889999999876
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.. ++||+|+++-.....++ . ....+++++.++|||||.+++.
T Consensus 103 ~~--~~fD~v~~~~~l~~~~~------~------------------------------~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 103 VP--TSIDTIVSTYAFHHLTD------D------------------------------EKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp CC--SCCSEEEEESCGGGSCH------H------------------------------HHHHHHHHHHHHSCTTCEEEEE
T ss_pred CC--CCeEEEEECcchhcCCh------H------------------------------HHHHHHHHHHHhcCCCCEEEEE
Confidence 55 48999997633321110 0 0125899999999999999996
Q ss_pred eCCC------------------------------CcHHHHHHHHHHCCCeEEEE
Q 043334 190 MGGR------------------------------PGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~~------------------------------~~~~~l~~ll~~~gf~~~~~ 213 (903)
.... .....++++++++||+++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 145 DTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp EECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred eccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 4221 13456678899999987766
No 337
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.34 E-value=9.9e-12 Score=141.18 Aligned_cols=139 Identities=18% Similarity=0.137 Sum_probs=104.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc-ccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL-DEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl-~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++++|||+|||+|.+++.+++.. ..+|+|+|+|+.+++.|++|+..|++ + ++++++++|+.+.
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~---------------~~v~~~~~D~~~~ 283 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDL---------------SKAEFVRDDVFKL 283 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCG---------------GGEEEEESCHHHH
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCc---------------cceEEEECCHHHH
Confidence 57899999999999999999862 46999999999999999999999886 3 3799999999887
Q ss_pred ccC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 109 CRD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 109 ~~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
... ...+||+|++|||+........ ......+..++.++.+.|+|||+
T Consensus 284 ~~~~~~~~~~fD~Ii~dpP~~~~~~~~~-----------------------------~~~~~~~~~~l~~~~~~LkpgG~ 334 (396)
T 3c0k_A 284 LRTYRDRGEKFDVIVMDPPKFVENKSQL-----------------------------MGACRGYKDINMLAIQLLNEGGI 334 (396)
T ss_dssp HHHHHHTTCCEEEEEECCSSTTTCSSSS-----------------------------SCCCTHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHhcCCCCCEEEECCCCCCCChhHH-----------------------------HHHHHHHHHHHHHHHHhcCCCcE
Confidence 432 1238999999999975433211 01112245789999999999999
Q ss_pred EEEEeCCCC-c----HHHHHHHHHHCCCeEEEE
Q 043334 186 MIFNMGGRP-G----QGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 186 ll~~~~~~~-~----~~~l~~ll~~~gf~~~~~ 213 (903)
+++...... . ...+++.+.+.|+....+
T Consensus 335 l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 335 LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 999766533 2 233445666777655443
No 338
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.34 E-value=3.8e-12 Score=146.26 Aligned_cols=152 Identities=14% Similarity=0.100 Sum_probs=110.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..++.+|+..++ .+|+|+|+|+.+++.+++|+..+|+ .++.+.++|..++
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~----------------~nv~v~~~Da~~l 168 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV----------------SNAIVTNHAPAEL 168 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC----------------SSEEEECCCHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC----------------CceEEEeCCHHHh
Confidence 5789999999999999999998754 6999999999999999999999987 4799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....++||+|++|||+........-+.....+..+.. ..-......+++.+.++|||||++++
T Consensus 169 ~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~----------------~~l~~~Q~~iL~~a~~~LkpGG~LvY 232 (456)
T 3m4x_A 169 VPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESP----------------LYCQKRQQEILSSAIKMLKNKGQLIY 232 (456)
T ss_dssp HHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHH----------------HHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHH----------------HHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 53222389999999998643322111111111100000 01123445899999999999999998
Q ss_pred EeCC---CCcHHHHHHHHHHCCCeEEEE
Q 043334 189 NMGG---RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 189 ~~~~---~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.+.+ ......+..++++++|+...+
T Consensus 233 sTCs~~~eEne~vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 233 STCTFAPEENEEIISWLVENYPVTIEEI 260 (456)
T ss_dssp EESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred EEeecccccCHHHHHHHHHhCCCEEEec
Confidence 5543 346677788899988665443
No 339
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.34 E-value=1.5e-11 Score=126.59 Aligned_cols=124 Identities=19% Similarity=0.177 Sum_probs=94.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++ .+. ++++++++|+.++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~~----------------~~~~~~~~d~~~~~ 103 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HGL----------------DNVEFRQQDLFDWT 103 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GCC----------------TTEEEEECCTTSCC
T ss_pred CCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cCC----------------CCeEEEecccccCC
Confidence 5679999999999999999988 6799999999999999986 333 47999999998873
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. .++||+|+++-.... +. ......+++++.++|||||.+++.
T Consensus 104 ~--~~~~D~v~~~~~l~~------~~------------------------------~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 104 P--DRQWDAVFFAHWLAH------VP------------------------------DDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp C--SSCEEEEEEESCGGG------SC------------------------------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C--CCceeEEEEechhhc------CC------------------------------HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 2 348999997522211 11 011347899999999999999985
Q ss_pred eCC---------------------------------CCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MGG---------------------------------RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~---------------------------------~~~~~~l~~ll~~~gf~~~~~ 213 (903)
... ......+.+++++.||++...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 202 (218)
T 3ou2_A 146 DVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVD 202 (218)
T ss_dssp EECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred eCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEee
Confidence 321 124566788899999985544
No 340
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.33 E-value=1.2e-11 Score=128.61 Aligned_cols=128 Identities=16% Similarity=0.153 Sum_probs=93.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++++|||+|||+|..++.+++.++ +.+|+|+|+++.+++.|++|+..++++ ++++++++|+.+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---------------~~v~~~~~d~~~~ 122 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ---------------DKVTILNGASQDL 122 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG---------------GGEEEEESCHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC---------------CceEEEECCHHHH
Confidence 468999999999999999998764 789999999999999999999888872 5799999998775
Q ss_pred ccCCC-----CceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 109 CRDHD-----IQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 109 ~~~~~-----~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
..... ++||+|+++.+.. .. .....+++.+ ++||||
T Consensus 123 l~~~~~~~~~~~fD~V~~d~~~~------~~--------------------------------~~~~~~~~~~-~~Lkpg 163 (221)
T 3u81_A 123 IPQLKKKYDVDTLDMVFLDHWKD------RY--------------------------------LPDTLLLEKC-GLLRKG 163 (221)
T ss_dssp GGGTTTTSCCCCCSEEEECSCGG------GH--------------------------------HHHHHHHHHT-TCCCTT
T ss_pred HHHHHHhcCCCceEEEEEcCCcc------cc--------------------------------hHHHHHHHhc-cccCCC
Confidence 43321 4899998642111 00 0112567777 999999
Q ss_pred cEEEEEeCCCCcHHHHHHHHHHCC-CeEE
Q 043334 184 GIMIFNMGGRPGQGVCKRLFERRG-FRVD 211 (903)
Q Consensus 184 G~ll~~~~~~~~~~~l~~ll~~~g-f~~~ 211 (903)
|++++......+.....+.+++.. |...
T Consensus 164 G~lv~~~~~~~~~~~~~~~l~~~~~~~~~ 192 (221)
T 3u81_A 164 TVLLADNVIVPGTPDFLAYVRGSSSFECT 192 (221)
T ss_dssp CEEEESCCCCCCCHHHHHHHHHCTTEEEE
T ss_pred eEEEEeCCCCcchHHHHHHHhhCCCceEE
Confidence 999996544444344445666554 4443
No 341
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.33 E-value=7.5e-12 Score=135.24 Aligned_cols=125 Identities=14% Similarity=0.101 Sum_probs=96.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..+++ +++++++|+.+..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~-----------------~~~~~~~d~~~~~ 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENL-----------------NISTALYDINAAN 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-----------------CEEEEECCGGGCC
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCC-----------------ceEEEEecccccc
Confidence 5689999999999999999987 67999999999999999999987764 7999999999876
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. .++||+|++|.++...+.. ....+++++.++|+|||.+++.
T Consensus 181 ~--~~~fD~i~~~~~~~~~~~~------------------------------------~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 181 I--QENYDFIVSTVVFMFLNRE------------------------------------RVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp C--CSCEEEEEECSSGGGSCGG------------------------------------GHHHHHHHHHHTEEEEEEEEEE
T ss_pred c--cCCccEEEEccchhhCCHH------------------------------------HHHHHHHHHHHhcCCCcEEEEE
Confidence 5 3489999988766532210 1237899999999999998774
Q ss_pred eC-------------CCCcHHHHHHHHHHCCCeEEEE
Q 043334 190 MG-------------GRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~-------------~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.. .......+++++.. |.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 223 AAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp EEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred EecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 32 12234455556643 777665
No 342
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.33 E-value=4.1e-12 Score=146.17 Aligned_cols=151 Identities=11% Similarity=0.121 Sum_probs=108.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..++.+|+..++ .+|+|+|+|+.+++.+++|+..+|+ . +.++++|+.++
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~----------------~-v~~~~~Da~~l 163 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA----------------P-LAVTQAPPRAL 163 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC----------------C-CEEECSCHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----------------e-EEEEECCHHHh
Confidence 5789999999999999999998764 6999999999999999999998887 4 89999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....++||+|++|||+....-....+.....+.++. -.........+++++.++|||||++++
T Consensus 164 ~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~----------------~~~l~~~Q~~iL~~a~~~LkpGG~Lvy 227 (464)
T 3m6w_A 164 AEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSA----------------PKRMAEVQKALLAQASRLLGPGGVLVY 227 (464)
T ss_dssp HHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTH----------------HHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhhccccCCEEEECCCcCCccccccChHHhhhcCHHH----------------HHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 5312238999999999964321111110000000000 001123346899999999999999998
Q ss_pred EeCC---CCcHHHHHHHHHHC-CCeEEEE
Q 043334 189 NMGG---RPGQGVCKRLFERR-GFRVDKL 213 (903)
Q Consensus 189 ~~~~---~~~~~~l~~ll~~~-gf~~~~~ 213 (903)
.+.+ ......+..++++. +|+...+
T Consensus 228 sTCs~~~eEne~vv~~~l~~~~~~~l~~~ 256 (464)
T 3m6w_A 228 STCTFAPEENEGVVAHFLKAHPEFRLEDA 256 (464)
T ss_dssp EESCCCGGGTHHHHHHHHHHCTTEEEECC
T ss_pred EeccCchhcCHHHHHHHHHHCCCcEEEec
Confidence 6543 34666777788887 5765543
No 343
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.33 E-value=2.1e-11 Score=126.28 Aligned_cols=127 Identities=13% Similarity=0.042 Sum_probs=90.9
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++..++.+|+|+|+|+.|++.+.++++.. .++.++.+|+.+.
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~------------------~~v~~~~~d~~~~ 117 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER------------------NNIIPLLFDASKP 117 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC------------------SSEEEECSCTTCG
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC------------------CCeEEEEcCCCCc
Confidence 4678999999999999999999876679999999999987776655422 3688999998774
Q ss_pred ---ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 109 ---CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 109 ---~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
.... ++||+|++|.+.. . ....+++++.++|||||+
T Consensus 118 ~~~~~~~-~~fD~V~~~~~~~----------~------------------------------~~~~~l~~~~r~LkpgG~ 156 (210)
T 1nt2_A 118 WKYSGIV-EKVDLIYQDIAQK----------N------------------------------QIEILKANAEFFLKEKGE 156 (210)
T ss_dssp GGTTTTC-CCEEEEEECCCST----------T------------------------------HHHHHHHHHHHHEEEEEE
T ss_pred hhhcccc-cceeEEEEeccCh----------h------------------------------HHHHHHHHHHHHhCCCCE
Confidence 1122 4899999872110 0 011458999999999999
Q ss_pred EEEEeC-----CCCcHHH-H-H--HHHHHCCCeEEEEEe
Q 043334 186 MIFNMG-----GRPGQGV-C-K--RLFERRGFRVDKLWQ 215 (903)
Q Consensus 186 ll~~~~-----~~~~~~~-l-~--~ll~~~gf~~~~~~~ 215 (903)
+++... .....+. . + +.+++. |++.+...
T Consensus 157 l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~ 194 (210)
T 1nt2_A 157 VVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGS 194 (210)
T ss_dssp EEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEE
T ss_pred EEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeec
Confidence 999742 2222222 2 1 237777 98887743
No 344
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=7.8e-12 Score=132.56 Aligned_cols=102 Identities=15% Similarity=0.236 Sum_probs=84.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.|++.++++. ++++++++|+.++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------------------~~~~~~~~d~~~~ 90 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------------------PNTNFGKADLATW 90 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------------------TTSEEEECCTTTC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------------------CCcEEEECChhhc
Confidence 4578999999999999999999988899999999999999999872 4789999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. . .++||+|++|......++ ...+++++.++|||||.+++
T Consensus 91 ~-~-~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 91 K-P-AQKADLLYANAVFQWVPD--------------------------------------HLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp C-C-SSCEEEEEEESCGGGSTT--------------------------------------HHHHHHHHGGGEEEEEEEEE
T ss_pred C-c-cCCcCEEEEeCchhhCCC--------------------------------------HHHHHHHHHHhcCCCeEEEE
Confidence 6 3 348999997644332111 23789999999999999999
Q ss_pred EeC
Q 043334 189 NMG 191 (903)
Q Consensus 189 ~~~ 191 (903)
...
T Consensus 131 ~~~ 133 (259)
T 2p35_A 131 QMP 133 (259)
T ss_dssp EEE
T ss_pred EeC
Confidence 764
No 345
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.32 E-value=1.2e-11 Score=130.38 Aligned_cols=125 Identities=15% Similarity=0.073 Sum_probs=98.7
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+++|+++++++.|++|...+++ .+++++..+|+.+.
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~~~~~~~d~~~~ 152 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL---------------GKNVKFFNVDFKDA 152 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC---------------CTTEEEECSCTTTS
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC---------------CCcEEEEEcChhhc
Confidence 36789999999999999999998 78999999999999999999987776 25799999999886
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... .++||+|++|+|.. . .+++++.++|+|||.+++
T Consensus 153 ~~~-~~~~D~v~~~~~~~------------~-------------------------------~~l~~~~~~L~~gG~l~~ 188 (248)
T 2yvl_A 153 EVP-EGIFHAAFVDVREP------------W-------------------------------HYLEKVHKSLMEGAPVGF 188 (248)
T ss_dssp CCC-TTCBSEEEECSSCG------------G-------------------------------GGHHHHHHHBCTTCEEEE
T ss_pred ccC-CCcccEEEECCcCH------------H-------------------------------HHHHHHHHHcCCCCEEEE
Confidence 522 23799999876611 0 457888999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
..+.......+.+.+++. |...+.+.
T Consensus 189 ~~~~~~~~~~~~~~l~~~-f~~~~~~~ 214 (248)
T 2yvl_A 189 LLPTANQVIKLLESIENY-FGNLEVVE 214 (248)
T ss_dssp EESSHHHHHHHHHHSTTT-EEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhh-CCcceEEE
Confidence 988654444445566666 77665543
No 346
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.32 E-value=7.4e-12 Score=132.34 Aligned_cols=131 Identities=18% Similarity=0.097 Sum_probs=100.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++..+ .+++++++|+.+.
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------------------~~~~~~~~d~~~~ 152 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM------------------PVGKFILASMETA 152 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS------------------SEEEEEESCGGGC
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC------------------CceEEEEccHHHC
Confidence 357899999999999999999876 568999999999999999887432 3799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+++-.... +. .+....+++++.++|||||.+++
T Consensus 153 ~~~~-~~fD~v~~~~~l~~------~~------------------------------~~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 153 TLPP-NTYDLIVIQWTAIY------LT------------------------------DADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp CCCS-SCEEEEEEESCGGG------SC------------------------------HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCC-CCeEEEEEcchhhh------CC------------------------------HHHHHHHHHHHHHhcCCCeEEEE
Confidence 5433 48999996432211 10 01134789999999999999999
Q ss_pred EeCC---------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGG---------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~---------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.... ......++++++++||++++...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 196 KENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp EEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred EecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 6531 12456778899999999988743
No 347
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.31 E-value=9.7e-12 Score=128.57 Aligned_cols=123 Identities=16% Similarity=0.279 Sum_probs=96.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc-
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY- 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~- 108 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++ .++.+..+|+.+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------------------~~~~~~~~~~~~~~ 107 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA----------------------GAGEVHLASYAQLA 107 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT----------------------CSSCEEECCHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh----------------------cccccchhhHHhhc
Confidence 4589999999999999999987 67999999999999999876 1467888888776
Q ss_pred --ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 109 --CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 109 --~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
......+||+|+++..+. ..+ ...+++++.++|||||.+
T Consensus 108 ~~~~~~~~~fD~v~~~~~l~-~~~--------------------------------------~~~~l~~~~~~L~pgG~l 148 (227)
T 3e8s_A 108 EAKVPVGKDYDLICANFALL-HQD--------------------------------------IIELLSAMRTLLVPGGAL 148 (227)
T ss_dssp TTCSCCCCCEEEEEEESCCC-SSC--------------------------------------CHHHHHHHHHTEEEEEEE
T ss_pred ccccccCCCccEEEECchhh-hhh--------------------------------------HHHHHHHHHHHhCCCeEE
Confidence 333333699999875555 111 116799999999999999
Q ss_pred EEEeCCC-------------------------------CcHHHHHHHHHHCCCeEEEEEe
Q 043334 187 IFNMGGR-------------------------------PGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 187 l~~~~~~-------------------------------~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
++..... .....+.++++++||+++.+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 149 VIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp EEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred EEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 9965310 1457778999999999988743
No 348
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.31 E-value=1.4e-11 Score=129.14 Aligned_cols=125 Identities=14% Similarity=0.105 Sum_probs=94.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc-
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA- 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~- 107 (903)
.++.+|||+|||+|.++..+++..+..+|+|+|+|+.|++.|++|+..+ +++.++.+|+.+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------~~v~~~~~d~~~~ 134 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER------------------ENIIPILGDANKP 134 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC------------------TTEEEEECCTTCG
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC------------------CCeEEEECCCCCc
Confidence 4678999999999999999999877679999999999999999987433 379999999987
Q ss_pred ---cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc
Q 043334 108 ---YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG 184 (903)
Q Consensus 108 ---~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG 184 (903)
.... ++||+|+.++|.. . ....+++++.++|||||
T Consensus 135 ~~~~~~~--~~~D~v~~~~~~~-----~-----------------------------------~~~~~l~~~~~~LkpgG 172 (230)
T 1fbn_A 135 QEYANIV--EKVDVIYEDVAQP-----N-----------------------------------QAEILIKNAKWFLKKGG 172 (230)
T ss_dssp GGGTTTS--CCEEEEEECCCST-----T-----------------------------------HHHHHHHHHHHHEEEEE
T ss_pred ccccccC--ccEEEEEEecCCh-----h-----------------------------------HHHHHHHHHHHhCCCCc
Confidence 3322 3899999543211 0 02267999999999999
Q ss_pred EEEEEeCC---CC-------cHHHHHHHHHHCCCeEEEEE
Q 043334 185 IMIFNMGG---RP-------GQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 185 ~ll~~~~~---~~-------~~~~l~~ll~~~gf~~~~~~ 214 (903)
.+++.... .. ....+. ++++.||+..+..
T Consensus 173 ~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 173 YGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp EEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred EEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEE
Confidence 99995321 11 124445 7888899887764
No 349
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.31 E-value=9e-12 Score=142.24 Aligned_cols=158 Identities=16% Similarity=0.262 Sum_probs=108.1
Q ss_pred CcccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCC
Q 043334 6 SIFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQ 84 (903)
Q Consensus 6 ~vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~ 84 (903)
.+|.|+.....+.+.+.. .++.+|||+|||+|.+++.+++.. +..+++|+|+++.+++.|
T Consensus 20 ~~~TP~~l~~~~~~~~~~-----~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------- 80 (421)
T 2ih2_A 20 RVETPPEVVDFMVSLAEA-----PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------- 80 (421)
T ss_dssp -CCCCHHHHHHHHHHCCC-----CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------
T ss_pred eEeCCHHHHHHHHHhhcc-----CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------
Confidence 357787555555554432 245699999999999999999876 568999999999999776
Q ss_pred CcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccc----hhhHHhhhhhhhhhhhccccccccccc
Q 043334 85 PIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDA----MSKIITENASEEFLYSLSNYCALQGFV 160 (903)
Q Consensus 85 ~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~----l~~~~~~~~~~~~~~~l~~~~al~~~v 160 (903)
.+++++++|+.+.... ++||+|++||||........ +........... +..+
T Consensus 81 -----------~~~~~~~~D~~~~~~~--~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---- 136 (421)
T 2ih2_A 81 -----------PWAEGILADFLLWEPG--EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKA-------FSTW---- 136 (421)
T ss_dssp -----------TTEEEEESCGGGCCCS--SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHH-------CTTC----
T ss_pred -----------CCCcEEeCChhhcCcc--CCCCEEEECcCccCcccccccccccCHHHHHHHHHh-------hhcc----
Confidence 1588999999987543 38999999999987554211 112221110000 0000
Q ss_pred cccccHHHHHHHHHHHhhcccCCcEEEEEeCCC----CcHHHHHHHHHHCCC
Q 043334 161 EDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGR----PGQGVCKRLFERRGF 208 (903)
Q Consensus 161 ~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~----~~~~~l~~ll~~~gf 208 (903)
....+.+..+++.+.++|+|||.+++.++.. .....+++.+.+.++
T Consensus 137 --~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 137 --KGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp --CTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred --cCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 1123456689999999999999999987653 133455777777776
No 350
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=8.5e-12 Score=134.40 Aligned_cols=100 Identities=22% Similarity=0.314 Sum_probs=80.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++ ++.+|+|+|+|+.|++.|+++. +++.+.++|+.+++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~---------------------~~~~~~~~d~~~~~ 113 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY---------------------PHLHFDVADARNFR 113 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC---------------------TTSCEEECCTTTCC
T ss_pred CCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC---------------------CCCEEEECChhhCC
Confidence 568999999999999999998 5789999999999999998774 36889999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.+ ++||+|+++......++ ...+++++.++|||||.+++.
T Consensus 114 ~~--~~fD~v~~~~~l~~~~d--------------------------------------~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 114 VD--KPLDAVFSNAMLHWVKE--------------------------------------PEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp CS--SCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred cC--CCcCEEEEcchhhhCcC--------------------------------------HHHHHHHHHHhcCCCcEEEEE
Confidence 43 48999997643332111 226799999999999999996
Q ss_pred eCC
Q 043334 190 MGG 192 (903)
Q Consensus 190 ~~~ 192 (903)
...
T Consensus 154 ~~~ 156 (279)
T 3ccf_A 154 FGG 156 (279)
T ss_dssp EEC
T ss_pred ecC
Confidence 543
No 351
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.31 E-value=1.5e-11 Score=133.10 Aligned_cols=111 Identities=18% Similarity=0.189 Sum_probs=85.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...++ ..+++++++|+.+..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~ 127 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKR---------------RFKVFFRAQDSYGRH 127 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCC---------------SSEEEEEESCTTTSC
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCC---------------CccEEEEECCccccc
Confidence 6789999999999999998876 455999999999999999999876654 257999999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|+++-.... .. ........+++++.++|||||.+++.
T Consensus 128 ~~~~~~fD~v~~~~~l~~------~~----------------------------~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 128 MDLGKEFDVISSQFSFHY------AF----------------------------STSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CCCSSCEEEEEEESCGGG------GG----------------------------SSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCCCcCEEEECchhhh------hc----------------------------CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 423348999997522110 00 01122347899999999999999986
Q ss_pred e
Q 043334 190 M 190 (903)
Q Consensus 190 ~ 190 (903)
.
T Consensus 174 ~ 174 (298)
T 1ri5_A 174 V 174 (298)
T ss_dssp E
T ss_pred E
Confidence 4
No 352
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.31 E-value=1.3e-11 Score=140.29 Aligned_cols=136 Identities=20% Similarity=0.223 Sum_probs=101.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||+|.+++.+++. +..+|+|+|+|+.+++.|++|+..|+++ ++++++++|+.+..
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~---------------~~v~~~~~d~~~~~ 280 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVE---------------DRMKFIVGSAFEEM 280 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCG---------------GGEEEEESCHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCC---------------ccceEEECCHHHHH
Confidence 5789999999999999999986 4459999999999999999999999872 37999999998764
Q ss_pred cC---CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 110 RD---HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 110 ~~---~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
.. ...+||+|++|||+....... . . .....+..++.++.+.|+|||.+
T Consensus 281 ~~~~~~~~~fD~Vi~dpP~~~~~~~~-~----~------------------------~~~~~~~~~l~~~~~~LkpgG~l 331 (396)
T 2as0_A 281 EKLQKKGEKFDIVVLDPPAFVQHEKD-L----K------------------------AGLRAYFNVNFAGLNLVKDGGIL 331 (396)
T ss_dssp HHHHHTTCCEEEEEECCCCSCSSGGG-H----H------------------------HHHHHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHhhCCCCCEEEECCCCCCCCHHH-H----H------------------------HHHHHHHHHHHHHHHhcCCCcEE
Confidence 32 123899999999998543211 1 1 11223558899999999999998
Q ss_pred EEEeCCC-CcHH----HHHHHHHHCCCeE
Q 043334 187 IFNMGGR-PGQG----VCKRLFERRGFRV 210 (903)
Q Consensus 187 l~~~~~~-~~~~----~l~~ll~~~gf~~ 210 (903)
++..... .... .+.+.+.+.|...
T Consensus 332 v~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 360 (396)
T 2as0_A 332 VTCSCSQHVDLQMFKDMIIAAGAKAGKFL 360 (396)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHTTEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 8865543 3332 2334555666554
No 353
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.31 E-value=7.5e-12 Score=131.24 Aligned_cols=126 Identities=11% Similarity=0.062 Sum_probs=95.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++.. ++.+|+|+|+|+.|++.+.+++..+ .+++++++|+.+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------------------~~v~~~~~d~~~ 137 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------------------TNIIPVIEDARH 137 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------------------TTEEEECSCTTC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------------------CCeEEEEcccCC
Confidence 467899999999999999999987 4579999999999998888887654 379999999987
Q ss_pred cc--cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 108 YC--RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 108 ~~--~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
.. ....++||+|++|+|. ++ . ...++.++.++|||||+
T Consensus 138 ~~~~~~~~~~~D~V~~~~~~---~~------~-------------------------------~~~~~~~~~~~LkpgG~ 177 (233)
T 2ipx_A 138 PHKYRMLIAMVDVIFADVAQ---PD------Q-------------------------------TRIVALNAHTFLRNGGH 177 (233)
T ss_dssp GGGGGGGCCCEEEEEECCCC---TT------H-------------------------------HHHHHHHHHHHEEEEEE
T ss_pred hhhhcccCCcEEEEEEcCCC---cc------H-------------------------------HHHHHHHHHHHcCCCeE
Confidence 42 1122489999998771 10 0 11568889999999999
Q ss_pred EEEEeCCC-----C-----cHHHHHHHHHHCCCeEEEE
Q 043334 186 MIFNMGGR-----P-----GQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 186 ll~~~~~~-----~-----~~~~l~~ll~~~gf~~~~~ 213 (903)
+++.+... . .... .+++++.||+..+.
T Consensus 178 l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~~ 214 (233)
T 2ipx_A 178 FVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQEQ 214 (233)
T ss_dssp EEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEEE
T ss_pred EEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEEE
Confidence 99965431 1 1112 36778889998775
No 354
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.31 E-value=1.5e-11 Score=132.69 Aligned_cols=139 Identities=19% Similarity=0.160 Sum_probs=100.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc--ccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN--ALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~--gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.+++|||+|||+|.++..+++..+..+|+++|+|+.+++.|++|+... +++ .++++++.+|..+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~--------------~~rv~v~~~D~~~ 140 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLD--------------DPRVDVQVDDGFM 140 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTT--------------STTEEEEESCSHH
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccC--------------CCceEEEECcHHH
Confidence 468999999999999999988766789999999999999999987542 221 2589999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
......++||+|++|+|....+..... ...+++++.++|+|||+++
T Consensus 141 ~l~~~~~~fD~Ii~d~~~~~~~~~~l~----------------------------------~~~~~~~~~~~L~pgG~lv 186 (275)
T 1iy9_A 141 HIAKSENQYDVIMVDSTEPVGPAVNLF----------------------------------TKGFYAGIAKALKEDGIFV 186 (275)
T ss_dssp HHHTCCSCEEEEEESCSSCCSCCCCCS----------------------------------TTHHHHHHHHHEEEEEEEE
T ss_pred HHhhCCCCeeEEEECCCCCCCcchhhh----------------------------------HHHHHHHHHHhcCCCcEEE
Confidence 654334589999999876432211000 0167899999999999999
Q ss_pred EEeCCCC-cHHH---HHHHHHHCCCeEEEEEehh
Q 043334 188 FNMGGRP-GQGV---CKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 188 ~~~~~~~-~~~~---l~~ll~~~gf~~~~~~~~~ 217 (903)
+..+... .... +.+.+++. |..+..+...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~ 219 (275)
T 1iy9_A 187 AQTDNPWFTPELITNVQRDVKEI-FPITKLYTAN 219 (275)
T ss_dssp EECCCTTTCHHHHHHHHHHHHTT-CSEEEEEEEC
T ss_pred EEcCCccccHHHHHHHHHHHHHh-CCCeEEEEEe
Confidence 9876532 2222 23445554 7776665433
No 355
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.31 E-value=1.5e-11 Score=135.16 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=85.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...++ .+++++.++|+.+.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDT---------------NRSRQVLLQGWEDF 152 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCC---------------SSCEEEEESCGGGC
T ss_pred CCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCC---------------CCceEEEECChHHC
Confidence 467899999999999999999887 57999999999999999999987766 25799999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ++||+|+++-.....+. +....+++++.++|||||.+++
T Consensus 153 ~----~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 153 A----EPVDRIVSIEAFEHFGH------------------------------------ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp C----CCCSEEEEESCGGGTCG------------------------------------GGHHHHHHHHHHHSCTTCEEEE
T ss_pred C----CCcCEEEEeChHHhcCH------------------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 3 38999997533221110 1133789999999999999998
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 193 ~~ 194 (318)
T 2fk8_A 193 QS 194 (318)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 356
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.31 E-value=5.2e-12 Score=130.77 Aligned_cols=151 Identities=13% Similarity=0.113 Sum_probs=102.1
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhh
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEK 91 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~ 91 (903)
++....++.+.. .++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.|++.+.++++.+..
T Consensus 14 ~~~~~~~~~l~~-----~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~------------ 76 (218)
T 3mq2_A 14 EFSDAEFEQLRS-----QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPA------------ 76 (218)
T ss_dssp ECCHHHHHHHHT-----TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGG------------
T ss_pred ccCHHHHHHhhc-----cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhh------------
Confidence 355555555552 256899999999999999999998889999999999999865444432110
Q ss_pred cccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHH
Q 043334 92 KTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIAR 171 (903)
Q Consensus 92 ~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~ 171 (903)
....++++++++|+.+++.... . |.|+.+.++.. . ..++.++ ...
T Consensus 77 ~~~~~~v~~~~~d~~~l~~~~~-~-d~v~~~~~~~~------~---~~~~~~~------------------------~~~ 121 (218)
T 3mq2_A 77 KGGLPNLLYLWATAERLPPLSG-V-GELHVLMPWGS------L---LRGVLGS------------------------SPE 121 (218)
T ss_dssp GTCCTTEEEEECCSTTCCSCCC-E-EEEEEESCCHH------H---HHHHHTS------------------------SSH
T ss_pred hcCCCceEEEecchhhCCCCCC-C-CEEEEEccchh------h---hhhhhcc------------------------HHH
Confidence 0112489999999998765432 4 77765444321 0 0001000 027
Q ss_pred HHHHHhhcccCCcEEEEEeCCC--------------C----cHHHHHHHHHHCCCeEEEEE
Q 043334 172 AVEEGIGVIKPSGIMIFNMGGR--------------P----GQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 172 ~l~~~~~~LkpgG~ll~~~~~~--------------~----~~~~l~~ll~~~gf~~~~~~ 214 (903)
+++++.++|||||.+++..+.. . ....+..++++.||++....
T Consensus 122 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 122 MLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp HHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 8999999999999999964311 1 12336678999999988763
No 357
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.31 E-value=6.6e-12 Score=135.67 Aligned_cols=105 Identities=11% Similarity=0.058 Sum_probs=83.5
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
+.++.+|||+|||+|.++..++.+.++.+|+|+|+|++|++.|++++...|+ ++++++++|+.+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl----------------~~v~~v~gDa~~ 183 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV----------------DGVNVITGDETV 183 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC----------------CSEEEEESCGGG
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC----------------CCeEEEECchhh
Confidence 3468999999999998765544455689999999999999999999987765 589999999998
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
+. . ++||+|+.+-- .+ ...++++++.++|||||+++
T Consensus 184 l~-d--~~FDvV~~~a~---~~--------------------------------------d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 184 ID-G--LEFDVLMVAAL---AE--------------------------------------PKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp GG-G--CCCSEEEECTT---CS--------------------------------------CHHHHHHHHHHHCCTTCEEE
T ss_pred CC-C--CCcCEEEECCC---cc--------------------------------------CHHHHHHHHHHHcCCCcEEE
Confidence 75 2 38999984210 00 02378999999999999999
Q ss_pred EEeCC
Q 043334 188 FNMGG 192 (903)
Q Consensus 188 ~~~~~ 192 (903)
+....
T Consensus 220 v~~~~ 224 (298)
T 3fpf_A 220 YRTYT 224 (298)
T ss_dssp EEECC
T ss_pred EEcCc
Confidence 97643
No 358
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.31 E-value=1.4e-11 Score=129.28 Aligned_cols=126 Identities=18% Similarity=0.306 Sum_probs=97.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPS-KVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~-~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.|+++... .+++++++|+.+.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~-------------------~~~~~~~~d~~~~ 101 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD-------------------TGITYERADLDKL 101 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS-------------------SSEEEEECCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc-------------------CCceEEEcChhhc
Confidence 5789999999999999999987 45 999999999999999877521 3689999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... .++||+|+++......++ ...+++++.++|||||.+++
T Consensus 102 ~~~-~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 102 HLP-QDSFDLAYSSLALHYVED--------------------------------------VARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp CCC-TTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred cCC-CCCceEEEEeccccccch--------------------------------------HHHHHHHHHHhcCcCcEEEE
Confidence 543 348999997543332110 22789999999999999998
Q ss_pred EeCC-------C-------------------------------------CcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGG-------R-------------------------------------PGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~-------~-------------------------------------~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.... . .....+.++++++||+++....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 143 STEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp EEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEE
T ss_pred EeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeecc
Confidence 5421 0 1356678899999999988753
No 359
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.31 E-value=1.1e-11 Score=136.93 Aligned_cols=138 Identities=17% Similarity=0.142 Sum_probs=97.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh--cccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYL--NALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~--~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
++++|||+|||+|.++..+++..+..+|+++|+|+++++.|++|+.. ++++ .++++++++|+.+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~--------------~~~v~~~~~D~~~ 181 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE--------------DKRVNVFIEDASK 181 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG--------------STTEEEEESCHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC--------------CCcEEEEEccHHH
Confidence 46899999999999999999876778999999999999999999754 2221 2589999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
......++||+|++|++....+. . . +. -..+++++.++|+|||+++
T Consensus 182 ~l~~~~~~fDvIi~d~~~p~~~~----~----~---------------l~-----------~~~~l~~~~~~LkpgG~lv 227 (321)
T 2pt6_A 182 FLENVTNTYDVIIVDSSDPIGPA----E----T---------------LF-----------NQNFYEKIYNALKPNGYCV 227 (321)
T ss_dssp HHHHCCSCEEEEEEECCCSSSGG----G----G---------------GS-----------SHHHHHHHHHHEEEEEEEE
T ss_pred HHhhcCCCceEEEECCcCCCCcc----h----h---------------hh-----------HHHHHHHHHHhcCCCcEEE
Confidence 64322348999999874221100 0 0 00 0278999999999999999
Q ss_pred EEeCCCC-cHHHHH---HHHHHCCCeEEEEEeh
Q 043334 188 FNMGGRP-GQGVCK---RLFERRGFRVDKLWQT 216 (903)
Q Consensus 188 ~~~~~~~-~~~~l~---~ll~~~gf~~~~~~~~ 216 (903)
+...... ....+. +.+++. |..+..+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~ 259 (321)
T 2pt6_A 228 AQCESLWIHVGTIKNMIGYAKKL-FKKVEYANI 259 (321)
T ss_dssp EEECCTTTCHHHHHHHHHHHHTT-CSEEEEEEE
T ss_pred EEcCCcccCHHHHHHHHHHHHHH-CCCeEEEEE
Confidence 9876532 323333 334333 666665443
No 360
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.30 E-value=9.4e-12 Score=135.58 Aligned_cols=142 Identities=14% Similarity=0.138 Sum_probs=95.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||+|.++..+++..+..+|+++|+|+.+++.|++++...+... -..++++++.+|..++.
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~-----------~~~~rv~~~~~D~~~~l 151 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGS-----------YDDPRFKLVIDDGVNFV 151 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSC-----------TTCTTCCEECSCSCC--
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccccc-----------ccCCceEEEEChHHHHH
Confidence 4689999999999999999987667899999999999999999976542100 00258999999998876
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|++|++....+... +. ...+++.+.+.|+|||++++.
T Consensus 152 ~~~~~~fDvIi~D~~~p~~~~~~-----------------------l~-----------~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 152 NQTSQTFDVIISDCTDPIGPGES-----------------------LF-----------TSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp -CCCCCEEEEEECC---------------------------------C-----------CHHHHHHHHHTEEEEEEEEEE
T ss_pred hhcCCCccEEEECCCCccCcchh-----------------------cc-----------HHHHHHHHHHhcCCCCEEEEe
Confidence 54445899999976532211100 00 126899999999999999997
Q ss_pred eCCCC----cHHHHHHHHHHCCCeEEEEEehh
Q 043334 190 MGGRP----GQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 190 ~~~~~----~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
.+... ....+.+.+++. |..+..+...
T Consensus 198 ~~s~~~~~~~~~~~~~~l~~~-F~~v~~~~~~ 228 (294)
T 3adn_A 198 NGVCFLQQEEAIDSHRKLSHY-FSDVGFYQAA 228 (294)
T ss_dssp EEECSSCCHHHHHHHHHHHHH-CSEEEEEEEE
T ss_pred cCCcccchHHHHHHHHHHHHH-CCCeEEEEEE
Confidence 64322 112222334443 7666654433
No 361
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.30 E-value=6.5e-12 Score=141.38 Aligned_cols=78 Identities=23% Similarity=0.302 Sum_probs=67.3
Q ss_pred CCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR 110 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~ 110 (903)
+.+|||+|||+|.+++.+|+. ..+|+|+|+|+.|++.|++|++.|++ ++++++++|+.+...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~----------------~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHI----------------DNVQIIRMAAEEFTQ 275 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTC----------------CSEEEECCCSHHHHH
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCC----------------CceEEEECCHHHHHH
Confidence 578999999999999999875 57999999999999999999999987 489999999987642
Q ss_pred C--CC-------------CceeEEEECCCCC
Q 043334 111 D--HD-------------IQLERIVGCIPQI 126 (903)
Q Consensus 111 ~--~~-------------~~fD~Iv~NpPy~ 126 (903)
. .. .+||+|+.|||+.
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~ 306 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPRS 306 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCTT
T ss_pred HHhhccccccccccccccCCCCEEEECcCcc
Confidence 1 10 2799999999987
No 362
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.30 E-value=1.6e-11 Score=128.72 Aligned_cols=129 Identities=12% Similarity=0.124 Sum_probs=96.3
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
+.+|.+|||+|||+|..+..+|+.. +..+|+|+|++++|++.+++++... .++..+.+|..
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~------------------~ni~~V~~d~~ 136 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR------------------RNIFPILGDAR 136 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC------------------TTEEEEESCTT
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh------------------cCeeEEEEecc
Confidence 4689999999999999999999987 4569999999999999998887433 37889999886
Q ss_pred cccc--CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc
Q 043334 107 AYCR--DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG 184 (903)
Q Consensus 107 ~~~~--~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG 184 (903)
.... ....++|+|++..++.. ....++.++.+.|||||
T Consensus 137 ~p~~~~~~~~~vDvVf~d~~~~~----------------------------------------~~~~~l~~~~r~LKpGG 176 (233)
T 4df3_A 137 FPEKYRHLVEGVDGLYADVAQPE----------------------------------------QAAIVVRNARFFLRDGG 176 (233)
T ss_dssp CGGGGTTTCCCEEEEEECCCCTT----------------------------------------HHHHHHHHHHHHEEEEE
T ss_pred CccccccccceEEEEEEeccCCh----------------------------------------hHHHHHHHHHHhccCCC
Confidence 6532 22348999987654431 01267899999999999
Q ss_pred EEEEEeCCCC---------cHHHHHHHHHHCCCeEEEEE
Q 043334 185 IMIFNMGGRP---------GQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 185 ~ll~~~~~~~---------~~~~l~~ll~~~gf~~~~~~ 214 (903)
.+++...... ......+.+++.||+..+..
T Consensus 177 ~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i 215 (233)
T 4df3_A 177 YMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVV 215 (233)
T ss_dssp EEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEE
Confidence 9998542211 11122456888999987763
No 363
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.30 E-value=3.3e-12 Score=134.70 Aligned_cols=110 Identities=12% Similarity=0.052 Sum_probs=83.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.+|.+|||||||+|..+..+++.. +.+|+|||+|+.+++.|+++....+. ++.++.+|+.+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~~-----------------~~~~~~~~a~~~ 120 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTH-----------------KVIPLKGLWEDV 120 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCSS-----------------EEEEEESCHHHH
T ss_pred cCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCCC-----------------ceEEEeehHHhh
Confidence 368899999999999999988764 46899999999999999999876653 789999998765
Q ss_pred ccC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 109 CRD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 109 ~~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
... .+++||.|+.++....... ........+++++.|+|||||+|+
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~~~---------------------------------~~~~~~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSEET---------------------------------WHTHQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGG---------------------------------TTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred cccccccCCceEEEeeeecccch---------------------------------hhhcchhhhhhhhhheeCCCCEEE
Confidence 422 2348999986533221110 011223478999999999999998
Q ss_pred EE
Q 043334 188 FN 189 (903)
Q Consensus 188 ~~ 189 (903)
|.
T Consensus 168 f~ 169 (236)
T 3orh_A 168 YC 169 (236)
T ss_dssp EC
T ss_pred EE
Confidence 84
No 364
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.30 E-value=6.3e-12 Score=132.25 Aligned_cols=80 Identities=25% Similarity=0.284 Sum_probs=71.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.|++.|++|+..++++ ++++++++|+.++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~---------------~~~~~~~~d~~~~~ 140 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIA---------------DKIEFICGDFLLLA 140 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCG---------------GGEEEEESCHHHHG
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCC---------------cCeEEEECChHHhc
Confidence 5789999999999999999987 589999999999999999999888762 48999999999886
Q ss_pred cCCCCceeEEEECCCCCCC
Q 043334 110 RDHDIQLERIVGCIPQILN 128 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~ 128 (903)
.. ++||+|++||||...
T Consensus 141 ~~--~~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 141 SF--LKADVVFLSPPWGGP 157 (241)
T ss_dssp GG--CCCSEEEECCCCSSG
T ss_pred cc--CCCCEEEECCCcCCc
Confidence 43 389999999999853
No 365
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.29 E-value=1.2e-11 Score=131.21 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=86.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..++.+++.++ +.+|+|+|+|+.+++.|++|+..+++ .++++++++|+.+.
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~---------------~~~v~~~~~d~~~~ 127 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV---------------DQRVTLREGPALQS 127 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC---------------TTTEEEEESCHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCcEEEEEcCHHHH
Confidence 468999999999999999999887 78999999999999999999988887 35899999999875
Q ss_pred ccCC--CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 109 CRDH--DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 109 ~~~~--~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
.... .++||+|+++.+.. .+..+++++.++|||||++
T Consensus 128 l~~~~~~~~fD~V~~d~~~~-----------------------------------------~~~~~l~~~~~~LkpGG~l 166 (248)
T 3tfw_A 128 LESLGECPAFDLIFIDADKP-----------------------------------------NNPHYLRWALRYSRPGTLI 166 (248)
T ss_dssp HHTCCSCCCCSEEEECSCGG-----------------------------------------GHHHHHHHHHHTCCTTCEE
T ss_pred HHhcCCCCCeEEEEECCchH-----------------------------------------HHHHHHHHHHHhcCCCeEE
Confidence 4332 23899999643200 0226799999999999999
Q ss_pred EEEeC
Q 043334 187 IFNMG 191 (903)
Q Consensus 187 l~~~~ 191 (903)
++...
T Consensus 167 v~~~~ 171 (248)
T 3tfw_A 167 IGDNV 171 (248)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 98543
No 366
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.29 E-value=1.8e-11 Score=128.76 Aligned_cols=124 Identities=19% Similarity=0.156 Sum_probs=93.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++ ++++++|+.+.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~------------------------~~~~~~d~~~~ 93 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK------------------------FNVVKSDAIEY 93 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT------------------------SEEECSCHHHH
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh------------------------cceeeccHHHH
Confidence 46789999999999999999987 67899999999999998743 56888998875
Q ss_pred c-cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 109 C-RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 109 ~-~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
. ....++||+|+++-.....+ ...+..+++++.++|||||.++
T Consensus 94 ~~~~~~~~fD~i~~~~~l~~~~------------------------------------~~~~~~~l~~~~~~LkpgG~l~ 137 (240)
T 3dli_A 94 LKSLPDKYLDGVMISHFVEHLD------------------------------------PERLFELLSLCYSKMKYSSYIV 137 (240)
T ss_dssp HHTSCTTCBSEEEEESCGGGSC------------------------------------GGGHHHHHHHHHHHBCTTCCEE
T ss_pred hhhcCCCCeeEEEECCchhhCC------------------------------------cHHHHHHHHHHHHHcCCCcEEE
Confidence 3 22234899999742211100 0113378999999999999999
Q ss_pred EEeCCC------------------CcHHHHHHHHHHCCCeEEEEE
Q 043334 188 FNMGGR------------------PGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 188 ~~~~~~------------------~~~~~l~~ll~~~gf~~~~~~ 214 (903)
+..... .....+.+++++.||+.+...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 138 IESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp EEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred EEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 965422 244667889999999987764
No 367
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.29 E-value=1e-11 Score=138.93 Aligned_cols=108 Identities=14% Similarity=0.130 Sum_probs=84.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH-------hcccccCCCCcchhhhcccCCcEEEE
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLY-------LNALDEKGQPIYDAEKKTLLDRVEFH 101 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~-------~~gl~~~~~~~~~~~~~~~~~~v~~~ 101 (903)
.++.+|||||||+|.+++.+|...+..+|+|||+++.++++|++|.. .+|+. .++++|+
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~--------------~~rVefi 237 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK--------------HAEYTLE 237 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC--------------CCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC--------------CCCeEEE
Confidence 36789999999999999999987766679999999999999998753 23331 2589999
Q ss_pred EccccccccCCC-CceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcc
Q 043334 102 ESDLLAYCRDHD-IQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVI 180 (903)
Q Consensus 102 ~gDl~~~~~~~~-~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~L 180 (903)
++|+.+...... ..||+|++|++|+. + + ....+.+.++.|
T Consensus 238 ~GD~~~lp~~d~~~~aDVVf~Nn~~F~-p-------d-------------------------------l~~aL~Ei~RvL 278 (438)
T 3uwp_A 238 RGDFLSEEWRERIANTSVIFVNNFAFG-P-------E-------------------------------VDHQLKERFANM 278 (438)
T ss_dssp ECCTTSHHHHHHHHTCSEEEECCTTCC-H-------H-------------------------------HHHHHHHHHTTS
T ss_pred ECcccCCccccccCCccEEEEcccccC-c-------h-------------------------------HHHHHHHHHHcC
Confidence 999988754210 26999999988752 1 0 125577889999
Q ss_pred cCCcEEEEE
Q 043334 181 KPSGIMIFN 189 (903)
Q Consensus 181 kpgG~ll~~ 189 (903)
||||+|++.
T Consensus 279 KPGGrIVss 287 (438)
T 3uwp_A 279 KEGGRIVSS 287 (438)
T ss_dssp CTTCEEEES
T ss_pred CCCcEEEEe
Confidence 999999974
No 368
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.29 E-value=6.3e-12 Score=139.69 Aligned_cols=118 Identities=23% Similarity=0.408 Sum_probs=94.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.+++. ++ ++.+|+|+|+|+.+++.|++|+..|+++ ++++++++|+.+..
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~---------------~~v~~~~~D~~~~~ 256 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLE---------------HKIIPILSDVREVD 256 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCT---------------TTEEEEESCGGGCC
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCC---------------CcEEEEECChHHhc
Confidence 578999999999999999 87 4789999999999999999999999872 57999999999886
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
++||+|++|||+... .+++.+.++|+|||.+++.
T Consensus 257 ----~~fD~Vi~dpP~~~~------------------------------------------~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 257 ----VKGNRVIMNLPKFAH------------------------------------------KFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp ----CCEEEEEECCTTTGG------------------------------------------GGHHHHHHHEEEEEEEEEE
T ss_pred ----CCCcEEEECCcHhHH------------------------------------------HHHHHHHHHcCCCCEEEEE
Confidence 389999999998621 3477888999999998885
Q ss_pred eCCCCcHHHHHHHHHHC-CCeEEE
Q 043334 190 MGGRPGQGVCKRLFERR-GFRVDK 212 (903)
Q Consensus 190 ~~~~~~~~~l~~ll~~~-gf~~~~ 212 (903)
...... ....+.+++. ++....
T Consensus 291 ~~~~~~-~~~~~~l~~~~~~~i~~ 313 (336)
T 2yx1_A 291 TIGKDF-DKAIKLFEKKCDCEVLE 313 (336)
T ss_dssp EEESSS-HHHHHHHHHHSEEEEEE
T ss_pred EeecCc-hHHHHHHHHhcCCcEEE
Confidence 433333 3334566665 565443
No 369
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.29 E-value=1.3e-11 Score=130.95 Aligned_cols=104 Identities=18% Similarity=0.279 Sum_probs=82.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++++ ..+ .+++++.++|+.++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~----------------~~~~~~~~~d~~~~ 98 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AGV----------------DRKVQVVQADARAI 98 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TTS----------------CTTEEEEESCTTSC
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hcc----------------CCceEEEEcccccC
Confidence 46789999999999999999986 679999999999999999887 222 25799999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+++-.+...++ ...+++++.++|||||.+++
T Consensus 99 ~~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~ 139 (263)
T 2yqz_A 99 PLPD-ESVHGVIVVHLWHLVPD--------------------------------------WPKVLAEAIRVLKPGGALLE 139 (263)
T ss_dssp CSCT-TCEEEEEEESCGGGCTT--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCC-CCeeEEEECCchhhcCC--------------------------------------HHHHHHHHHHHCCCCcEEEE
Confidence 5333 48999997533321110 22789999999999999998
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 140 ~~ 141 (263)
T 2yqz_A 140 GW 141 (263)
T ss_dssp EE
T ss_pred Ee
Confidence 63
No 370
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.29 E-value=2.3e-11 Score=126.28 Aligned_cols=106 Identities=19% Similarity=0.156 Sum_probs=86.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..++.+++.++ +.+|+|+|+++.+++.|++|+...++ .++++++++|+.+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 122 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL---------------NDRVEVRTGLALDS 122 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC---------------TTTEEEEESCHHHH
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCcEEEEEcCHHHH
Confidence 468999999999999999999887 68999999999999999999988876 25799999999775
Q ss_pred ccC----CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc
Q 043334 109 CRD----HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG 184 (903)
Q Consensus 109 ~~~----~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG 184 (903)
... ..++||+|+++++.. .+..+++++.++|+|||
T Consensus 123 ~~~~~~~~~~~fD~v~~d~~~~-----------------------------------------~~~~~l~~~~~~L~pgG 161 (223)
T 3duw_A 123 LQQIENEKYEPFDFIFIDADKQ-----------------------------------------NNPAYFEWALKLSRPGT 161 (223)
T ss_dssp HHHHHHTTCCCCSEEEECSCGG-----------------------------------------GHHHHHHHHHHTCCTTC
T ss_pred HHHHHhcCCCCcCEEEEcCCcH-----------------------------------------HHHHHHHHHHHhcCCCc
Confidence 332 113799999654311 02267899999999999
Q ss_pred EEEEEeC
Q 043334 185 IMIFNMG 191 (903)
Q Consensus 185 ~ll~~~~ 191 (903)
.+++...
T Consensus 162 ~lv~~~~ 168 (223)
T 3duw_A 162 VIIGDNV 168 (223)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9998644
No 371
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.29 E-value=1.4e-10 Score=136.15 Aligned_cols=199 Identities=13% Similarity=0.178 Sum_probs=125.1
Q ss_pred cccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHHHHHhcccccCC
Q 043334 7 IFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKW---LPSKVYGLDINPRAIRISWINLYLNALDEKG 83 (903)
Q Consensus 7 vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~---~~~~V~giDis~~al~~A~~n~~~~gl~~~~ 83 (903)
.|+|++-+..+.+.+..... ..++.+|+|.|||||.+.+.+++.. +..+++|+|+++.++++|+.|+..+|++
T Consensus 199 fyTP~~Vv~lmv~ll~~~~~-~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~--- 274 (542)
T 3lkd_A 199 FYTPQPVAKLMTQIAFLGRE-DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP--- 274 (542)
T ss_dssp CCCCHHHHHHHHHHHHTTCT-TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC---
T ss_pred ecccHHHHHHHHHHHhcccC-CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC---
Confidence 67888655555555543211 2357899999999999999988874 3568999999999999999999988872
Q ss_pred CCcchhhhcccCCcEEEEEcccccc--ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccccc
Q 043334 84 QPIYDAEKKTLLDRVEFHESDLLAY--CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVE 161 (903)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~gDl~~~--~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~ 161 (903)
.+++.+.++|.+.. +.....+||+|++||||.......... .. +..| .++..+.
T Consensus 275 -----------~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~--~~---d~rf----~~~G~~~---- 330 (542)
T 3lkd_A 275 -----------IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGF--MD---DPRF----SPFGKLA---- 330 (542)
T ss_dssp -----------GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGG--GG---STTT----GGGSSCC----
T ss_pred -----------cCccceEecceecccccccccccccEEEecCCcCCccccchhh--hh---hhhh----hhhhhcC----
Confidence 13688999998875 322234899999999998543221100 00 0000 0000000
Q ss_pred ccccHHHHHHHHHHHhhccc-CCcEEEEEeCCC-----CcHHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCcc-e
Q 043334 162 DQFGLGLIARAVEEGIGVIK-PSGIMIFNMGGR-----PGQGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDIS-A 234 (903)
Q Consensus 162 ~~~g~~~~~~~l~~~~~~Lk-pgG~ll~~~~~~-----~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i~-~ 234 (903)
.. +...+ .|+..+.++|+ |||++.+.++.. .....+++.+-+.+.-. .++ ......|+ .+.+. .
T Consensus 331 ~~-s~~~~-~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~l~-~II-----~LP~~lF~-~t~i~t~ 401 (542)
T 3lkd_A 331 PK-SKADF-AFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGAID-TVI-----GLPANIFF-NTSIPTT 401 (542)
T ss_dssp CT-TCCHH-HHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTCEE-EEE-----ECCSSCSS-SCCCCEE
T ss_pred CC-chhhH-HHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCCcee-EEE-----EccccccC-CCCCcEE
Confidence 00 11111 68999999999 999998877642 12345566666665432 221 12334454 45555 4
Q ss_pred eeeeeccC
Q 043334 235 LVEIEKNS 242 (903)
Q Consensus 235 l~~~e~~~ 242 (903)
++.+.++.
T Consensus 402 Ilvl~K~k 409 (542)
T 3lkd_A 402 VIILKKNR 409 (542)
T ss_dssp EEEECSSC
T ss_pred EEEEecCC
Confidence 56666654
No 372
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.28 E-value=1.7e-11 Score=142.08 Aligned_cols=146 Identities=12% Similarity=0.145 Sum_probs=104.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..+|+..+ ..+|+|+|+|+.+++.+++|+..+|+ .++.++++|+.++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~----------------~nv~~~~~D~~~~ 180 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI----------------SNVALTHFDGRVF 180 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC----------------CSEEEECCCSTTH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----------------CcEEEEeCCHHHh
Confidence 578999999999999999999875 47999999999999999999998887 4799999999886
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....++||+|++|||+.........+.....+.++. ...-..+...+++++.++|||||++++
T Consensus 181 ~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~----------------~~~l~~~q~~iL~~a~~~LkpGG~Lvy 244 (479)
T 2frx_A 181 GAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPES----------------NQEIAATQRELIDSAFHALRPGGTLVY 244 (479)
T ss_dssp HHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHH----------------HHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhH----------------HHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 5312238999999999974221110000000000000 000112345889999999999999998
Q ss_pred EeCC---CCcHHHHHHHHHHCC
Q 043334 189 NMGG---RPGQGVCKRLFERRG 207 (903)
Q Consensus 189 ~~~~---~~~~~~l~~ll~~~g 207 (903)
.+.+ ......+..++++.+
T Consensus 245 sTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 245 STCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp EESCCSSTTTHHHHHHHHHHST
T ss_pred ecccCCcccCHHHHHHHHHHCC
Confidence 6543 345666677888775
No 373
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.28 E-value=5.9e-12 Score=134.55 Aligned_cols=108 Identities=16% Similarity=0.176 Sum_probs=81.9
Q ss_pred HHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCC
Q 043334 17 FYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLD 96 (903)
Q Consensus 17 ~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~ 96 (903)
+++.|..... .+.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++ +
T Consensus 29 l~~~l~~~~~---~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~~----------------------~ 81 (257)
T 4hg2_A 29 LFRWLGEVAP---ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALRH----------------------P 81 (257)
T ss_dssp HHHHHHHHSS---CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCCC----------------------T
T ss_pred HHHHHHHhcC---CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhhc----------------------C
Confidence 4444444333 4679999999999999999987 57999999999999887532 4
Q ss_pred cEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHH
Q 043334 97 RVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEG 176 (903)
Q Consensus 97 ~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~ 176 (903)
++++.++|+.+++.+. ++||+|+++--++ .+. ..++++++
T Consensus 82 ~v~~~~~~~e~~~~~~-~sfD~v~~~~~~h------~~~---------------------------------~~~~~~e~ 121 (257)
T 4hg2_A 82 RVTYAVAPAEDTGLPP-ASVDVAIAAQAMH------WFD---------------------------------LDRFWAEL 121 (257)
T ss_dssp TEEEEECCTTCCCCCS-SCEEEEEECSCCT------TCC---------------------------------HHHHHHHH
T ss_pred CceeehhhhhhhcccC-CcccEEEEeeehh------Hhh---------------------------------HHHHHHHH
Confidence 7999999998876554 4899999742221 110 12679999
Q ss_pred hhcccCCcEEEEEeC
Q 043334 177 IGVIKPSGIMIFNMG 191 (903)
Q Consensus 177 ~~~LkpgG~ll~~~~ 191 (903)
.|+|||||+|++...
T Consensus 122 ~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 122 RRVARPGAVFAAVTY 136 (257)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCCEEEEEEC
Confidence 999999999987543
No 374
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.28 E-value=7.2e-12 Score=130.24 Aligned_cols=105 Identities=14% Similarity=0.143 Sum_probs=85.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..++.+++.++ +.+|+|+|+++.+++.|++++..+++ .++++++++|+.+.
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 128 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL---------------SDKIGLRLSPAKDT 128 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC---------------TTTEEEEESCHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC---------------CCceEEEeCCHHHH
Confidence 467999999999999999999877 78999999999999999999988877 25799999999776
Q ss_pred ccCCC-----CceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 109 CRDHD-----IQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 109 ~~~~~-----~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
..... ++||+|+.+++.. .+..+++++.++||||
T Consensus 129 ~~~~~~~~~~~~fD~v~~~~~~~-----------------------------------------~~~~~l~~~~~~L~pg 167 (225)
T 3tr6_A 129 LAELIHAGQAWQYDLIYIDADKA-----------------------------------------NTDLYYEESLKLLREG 167 (225)
T ss_dssp HHHHHTTTCTTCEEEEEECSCGG-----------------------------------------GHHHHHHHHHHHEEEE
T ss_pred HHHhhhccCCCCccEEEECCCHH-----------------------------------------HHHHHHHHHHHhcCCC
Confidence 33210 4899999665310 0226789999999999
Q ss_pred cEEEEEe
Q 043334 184 GIMIFNM 190 (903)
Q Consensus 184 G~ll~~~ 190 (903)
|++++..
T Consensus 168 G~lv~~~ 174 (225)
T 3tr6_A 168 GLIAVDN 174 (225)
T ss_dssp EEEEEEC
T ss_pred cEEEEeC
Confidence 9999854
No 375
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.28 E-value=1.3e-11 Score=127.19 Aligned_cols=104 Identities=19% Similarity=0.131 Sum_probs=85.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..++.+++..+ +.+|+++|+|+.+++.|++|+...++ .++++++++|..+.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 120 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL---------------IDRVELQVGDPLGI 120 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG---------------GGGEEEEESCHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC---------------CceEEEEEecHHHH
Confidence 457999999999999999999877 78999999999999999999987776 25799999999876
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.....+ ||+|+++.+.. .+..+++++.++|||||.+++
T Consensus 121 ~~~~~~-fD~v~~~~~~~-----------------------------------------~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 121 AAGQRD-IDILFMDCDVF-----------------------------------------NGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp HTTCCS-EEEEEEETTTS-----------------------------------------CHHHHHHHHGGGEEEEEEEEE
T ss_pred hccCCC-CCEEEEcCChh-----------------------------------------hhHHHHHHHHHhcCCCeEEEE
Confidence 444345 99999752210 022679999999999999998
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 159 ~~ 160 (210)
T 3c3p_A 159 VN 160 (210)
T ss_dssp ES
T ss_pred EC
Confidence 54
No 376
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.9e-11 Score=133.18 Aligned_cols=105 Identities=14% Similarity=0.178 Sum_probs=85.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-ccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLN-ALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~-gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
++.+|||+|||+|..+..+++.+ ++.+|+|+|+|+.+++.|++++..+ +. .++++++++|+.+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---------------~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT---------------YKNVSFKISSSDD 100 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C---------------CTTEEEEECCTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC---------------CCceEEEEcCHHh
Confidence 67899999999999999999876 7889999999999999999998765 22 2589999999988
Q ss_pred cccCC-----CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccC
Q 043334 108 YCRDH-----DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKP 182 (903)
Q Consensus 108 ~~~~~-----~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkp 182 (903)
+.... .++||+|+++-..... ....+++++.++|||
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~---------------------------------------~~~~~l~~~~~~Lkp 141 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF---------------------------------------DFEKFQRSAYANLRK 141 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS---------------------------------------CHHHHHHHHHHHEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHh---------------------------------------CHHHHHHHHHHhcCC
Confidence 75443 1489999975322211 023789999999999
Q ss_pred CcEEEE
Q 043334 183 SGIMIF 188 (903)
Q Consensus 183 gG~ll~ 188 (903)
||.+++
T Consensus 142 gG~l~i 147 (299)
T 3g5t_A 142 DGTIAI 147 (299)
T ss_dssp EEEEEE
T ss_pred CcEEEE
Confidence 999988
No 377
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.27 E-value=1.2e-11 Score=129.71 Aligned_cols=105 Identities=13% Similarity=0.169 Sum_probs=86.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..+..+++..|+.+|+|+|+++.+++.|++++..+++ .++++++++|+.+..
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~ 118 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL---------------ESRIELLFGDALQLG 118 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC---------------TTTEEEECSCGGGSH
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCcEEEEECCHHHHH
Confidence 46799999999999999999998888999999999999999999988776 257999999998753
Q ss_pred cCC--CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 110 RDH--DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 110 ~~~--~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
... .++||+|+++.+.. .+..+++.+.+.|+|||.++
T Consensus 119 ~~~~~~~~fD~I~~~~~~~-----------------------------------------~~~~~l~~~~~~L~pgG~lv 157 (233)
T 2gpy_A 119 EKLELYPLFDVLFIDAAKG-----------------------------------------QYRRFFDMYSPMVRPGGLIL 157 (233)
T ss_dssp HHHTTSCCEEEEEEEGGGS-----------------------------------------CHHHHHHHHGGGEEEEEEEE
T ss_pred HhcccCCCccEEEECCCHH-----------------------------------------HHHHHHHHHHHHcCCCeEEE
Confidence 221 23899999764421 02277999999999999999
Q ss_pred EEe
Q 043334 188 FNM 190 (903)
Q Consensus 188 ~~~ 190 (903)
+..
T Consensus 158 ~~~ 160 (233)
T 2gpy_A 158 SDN 160 (233)
T ss_dssp EET
T ss_pred EEc
Confidence 863
No 378
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.27 E-value=1.2e-11 Score=132.47 Aligned_cols=166 Identities=13% Similarity=0.089 Sum_probs=103.3
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCC-C---c-
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQ-P---I- 86 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~-~---~- 86 (903)
+|....+..+-.. ...++.+|||+|||+|.+++.++.. +..+|+|+|+|+.|++.|+++++.+... ... + +
T Consensus 39 ~~~~~~~~~~~~~--~~~~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~-~d~s~~~~~~ 114 (263)
T 2a14_A 39 KFNLECLHKTFGP--GGLQGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGA-YDWTPAVKFA 114 (263)
T ss_dssp HHHHHHHHHHHST--TSCCEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTC-CCCHHHHHHH
T ss_pred HHHHHHHHHHhcC--CCCCCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCc-ccchHHHHHH
Confidence 4555444333221 1346789999999999888776654 2247999999999999999988654210 000 0 0
Q ss_pred chh-------h--hcccCCcEE-EEEcccccccc-C--CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccc
Q 043334 87 YDA-------E--KKTLLDRVE-FHESDLLAYCR-D--HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNY 153 (903)
Q Consensus 87 ~~~-------~--~~~~~~~v~-~~~gDl~~~~~-~--~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 153 (903)
.+. + .+....++. ++++|+.+..+ . ..++||+|+++--.. .+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~----------~i~-------------- 170 (263)
T 2a14_A 115 CELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAME----------CAC-------------- 170 (263)
T ss_dssp HHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH----------HHC--------------
T ss_pred HhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHH----------Hhc--------------
Confidence 000 0 000112354 89999988422 1 134899999641111 000
Q ss_pred ccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeC--C-------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 154 CALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMG--G-------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 154 ~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~--~-------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
...+.+..++++++++|||||.|++... . ....+.+.+++++.||.+++...
T Consensus 171 ----------~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 171 ----------CSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp ----------SSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ----------CCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEee
Confidence 0012244789999999999999999531 1 13567788999999999887743
No 379
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.26 E-value=4.7e-11 Score=124.81 Aligned_cols=101 Identities=13% Similarity=0.290 Sum_probs=78.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++. ++++++++|+.+..
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~---------------------~~~~~~~~d~~~~~ 96 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL---------------------PDATLHQGDMRDFR 96 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC---------------------TTCEEEECCTTTCC
T ss_pred CCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC---------------------CCCEEEECCHHHcc
Confidence 57899999999999999999985 39999999999999998874 36899999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. .++||+|++.. ....++ ...+....+++++.++|||||.+++.
T Consensus 97 ~--~~~~D~v~~~~-----~~~~~~-----------------------------~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 97 L--GRKFSAVVSMF-----SSVGYL-----------------------------KTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp C--SSCEEEEEECT-----TGGGGC-----------------------------CSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c--CCCCcEEEEcC-----chHhhc-----------------------------CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 4 34899999421 011111 01112347899999999999999985
No 380
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.26 E-value=2.4e-11 Score=124.90 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=83.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|+..+++ +++++.++|+.+.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDL----------------HNVSTRHGDGWQG 137 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTC----------------CSEEEEESCGGGC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC----------------CceEEEECCcccC
Confidence 36789999999999999999998 68999999999999999999988776 4799999999886
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.... ++||+|+++.+... +.+++.+.|||||++++
T Consensus 138 ~~~~-~~~D~i~~~~~~~~--------------------------------------------~~~~~~~~L~pgG~lv~ 172 (210)
T 3lbf_A 138 WQAR-APFDAIIVTAAPPE--------------------------------------------IPTALMTQLDEGGILVL 172 (210)
T ss_dssp CGGG-CCEEEEEESSBCSS--------------------------------------------CCTHHHHTEEEEEEEEE
T ss_pred CccC-CCccEEEEccchhh--------------------------------------------hhHHHHHhcccCcEEEE
Confidence 5443 38999997632221 01246788999999999
Q ss_pred EeCC
Q 043334 189 NMGG 192 (903)
Q Consensus 189 ~~~~ 192 (903)
.++.
T Consensus 173 ~~~~ 176 (210)
T 3lbf_A 173 PVGE 176 (210)
T ss_dssp EECS
T ss_pred EEcC
Confidence 8876
No 381
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.26 E-value=6.4e-11 Score=136.75 Aligned_cols=152 Identities=13% Similarity=0.108 Sum_probs=107.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..+++..++ .+|+|+|+++.+++.+++|+..+|+ .+++++++|+.+.
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~----------------~~v~~~~~D~~~~ 322 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI----------------KIVKPLVKDARKA 322 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC----------------CSEEEECSCTTCC
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC----------------CcEEEEEcChhhc
Confidence 5789999999999999999998766 7999999999999999999998887 4799999999887
Q ss_pred ccCC-CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 109 CRDH-DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 109 ~~~~-~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.... +++||+|++|||+.........+.......++.. ..-..+...+++.+.++|||||.++
T Consensus 323 ~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~----------------~~l~~~q~~iL~~a~~~LkpGG~lv 386 (450)
T 2yxl_A 323 PEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKI----------------NEMSQLQRELLESAARLVKPGGRLL 386 (450)
T ss_dssp SSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSH----------------HHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred chhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHH----------------HHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 5321 1479999999999743321111100000000000 0011223578999999999999999
Q ss_pred EEeCCC---CcHHHHHHHHHHC-CCeEEEE
Q 043334 188 FNMGGR---PGQGVCKRLFERR-GFRVDKL 213 (903)
Q Consensus 188 ~~~~~~---~~~~~l~~ll~~~-gf~~~~~ 213 (903)
+..... .....+...++++ +|+....
T Consensus 387 y~tcs~~~~ene~~v~~~l~~~~~~~~~~~ 416 (450)
T 2yxl_A 387 YTTCSIFKEENEKNIRWFLNVHPEFKLVPL 416 (450)
T ss_dssp EEESCCCGGGTHHHHHHHHHHCSSCEECCC
T ss_pred EEeCCCChhhHHHHHHHHHHhCCCCEEeec
Confidence 865543 2445667778876 6876543
No 382
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.26 E-value=1.8e-11 Score=136.61 Aligned_cols=107 Identities=16% Similarity=0.158 Sum_probs=85.6
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++++|||+|||+|.++..+++. +..+|+|+|+|+ |++.|++++..+++ .++++++++|+.+.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 127 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKL---------------DHVVTIIKGKVEEV 127 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC---------------TTTEEEEESCTTTC
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCC---------------CCcEEEEECcHHHc
Confidence 46789999999999999999987 556999999995 99999999998887 25799999999988
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
..+. ++||+|++|++........ ....+++++.++|||||++++
T Consensus 128 ~~~~-~~fD~Iis~~~~~~l~~~~-----------------------------------~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 128 ELPV-EKVDIIISEWMGYCLFYES-----------------------------------MLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CCSS-SCEEEEEECCCBBTBTBTC-----------------------------------CHHHHHHHHHHHEEEEEEEES
T ss_pred cCCC-CceEEEEEccccccccCch-----------------------------------hHHHHHHHHHHhCCCCCEEcc
Confidence 5443 4899999986533211100 023678899999999999875
No 383
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.26 E-value=2.3e-11 Score=130.94 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=99.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-c-cccCCCCcchhhhcccCCcEEEEEccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLN-A-LDEKGQPIYDAEKKTLLDRVEFHESDL 105 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~-g-l~~~~~~~~~~~~~~~~~~v~~~~gDl 105 (903)
.++.+|||+|||+|.++..+++.. ++.+|+++|+++++++.|++|+..+ + + .+++++.++|+
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~---------------~~~v~~~~~d~ 162 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP---------------PDNWRLVVSDL 162 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC---------------CTTEEEECSCG
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC---------------CCcEEEEECch
Confidence 467899999999999999999865 4689999999999999999999776 4 2 25899999999
Q ss_pred cccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 106 LAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 106 ~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
.+..... ++||+|++|+|.. ..+++++.++|+|||.
T Consensus 163 ~~~~~~~-~~~D~v~~~~~~~-------------------------------------------~~~l~~~~~~L~pgG~ 198 (280)
T 1i9g_A 163 ADSELPD-GSVDRAVLDMLAP-------------------------------------------WEVLDAVSRLLVAGGV 198 (280)
T ss_dssp GGCCCCT-TCEEEEEEESSCG-------------------------------------------GGGHHHHHHHEEEEEE
T ss_pred HhcCCCC-CceeEEEECCcCH-------------------------------------------HHHHHHHHHhCCCCCE
Confidence 8874332 3899999875511 0458889999999999
Q ss_pred EEEEeCCCCcHHHHHHHHHH-CCCeEEEEEe
Q 043334 186 MIFNMGGRPGQGVCKRLFER-RGFRVDKLWQ 215 (903)
Q Consensus 186 ll~~~~~~~~~~~l~~ll~~-~gf~~~~~~~ 215 (903)
+++..........+.+.+++ .+|...+.+.
T Consensus 199 l~~~~~~~~~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 199 LMVYVATVTQLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp EEEEESSHHHHHHHHHHHHHHSSBCCCEEEC
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCcCCcEEEE
Confidence 99988764433344455665 7887666543
No 384
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.25 E-value=4.8e-11 Score=121.84 Aligned_cols=118 Identities=18% Similarity=0.146 Sum_probs=85.9
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|++|+. +++++++|+.++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------------------~~~~~~~d~~~~ 107 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------------------GVNFMVADVSEI 107 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------------------TSEEEECCGGGC
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------------------CCEEEECcHHHC
Confidence 36789999999999999999887 44589999999999999998862 588999999886
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ++||+|++||||....... ...+++++.+.+ |+ +++
T Consensus 108 ~----~~~D~v~~~~p~~~~~~~~------------------------------------~~~~l~~~~~~~--g~-~~~ 144 (200)
T 1ne2_A 108 S----GKYDTWIMNPPFGSVVKHS------------------------------------DRAFIDKAFETS--MW-IYS 144 (200)
T ss_dssp C----CCEEEEEECCCC-------------------------------------------CHHHHHHHHHHE--EE-EEE
T ss_pred C----CCeeEEEECCCchhccCch------------------------------------hHHHHHHHHHhc--Cc-EEE
Confidence 3 3899999999998543210 015677888887 44 444
Q ss_pred EeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 189 NMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.... .....+.+.+.+.| ....+
T Consensus 145 ~~~~-~~~~~~~~~~~~~g-~~~~~ 167 (200)
T 1ne2_A 145 IGNA-KARDFLRREFSARG-DVFRE 167 (200)
T ss_dssp EEEG-GGHHHHHHHHHHHE-EEEEE
T ss_pred EEcC-chHHHHHHHHHHCC-CEEEE
Confidence 4433 23455567888888 55544
No 385
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.25 E-value=3.1e-11 Score=138.01 Aligned_cols=98 Identities=18% Similarity=0.295 Sum_probs=77.5
Q ss_pred ccCCcccCc--chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccc
Q 043334 3 VIPSIFIPE--DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALD 80 (903)
Q Consensus 3 ~~p~vfiP~--~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~ 80 (903)
+.|+.|... .-...+++.+.. ..++.+|||+|||+|.+++.+++. +.+|+|+|+|++|++.|++|+..|++
T Consensus 265 ~~~~~F~q~n~~~~e~l~~~~~~----~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl- 337 (425)
T 2jjq_A 265 IHPNSFFQTNSYQAVNLVRKVSE----LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNV- 337 (425)
T ss_dssp ECTTSCCCSBHHHHHHHHHHHHH----HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTC-
T ss_pred EccccccccCHHHHHHHHHHhhc----cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC-
Confidence 456666642 223344444333 235789999999999999999986 67999999999999999999998887
Q ss_pred cCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCC
Q 043334 81 EKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQI 126 (903)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~ 126 (903)
+ ++++++|+.+.... +||+|++|||+.
T Consensus 338 ---------------~-v~~~~~d~~~~~~~---~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 338 ---------------D-AEFEVASDREVSVK---GFDTVIVDPPRA 364 (425)
T ss_dssp ---------------C-EEEEECCTTTCCCT---TCSEEEECCCTT
T ss_pred ---------------c-EEEEECChHHcCcc---CCCEEEEcCCcc
Confidence 4 99999999987533 799999999974
No 386
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.24 E-value=2.4e-11 Score=129.05 Aligned_cols=105 Identities=16% Similarity=0.187 Sum_probs=85.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++++|||+|||+|..++.+++.++ +.+|+++|+|+.+++.|++|+...++ .++++++++|..+.
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~---------------~~~i~~~~gda~~~ 143 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV---------------DHKIDFREGPALPV 143 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC---------------GGGEEEEESCHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCCeEEEECCHHHH
Confidence 467999999999999999999887 68999999999999999999988776 25899999999875
Q ss_pred ccCC------CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccC
Q 043334 109 CRDH------DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKP 182 (903)
Q Consensus 109 ~~~~------~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkp 182 (903)
.... .++||+|+++.+.. .+..+++++.++|||
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~~~-----------------------------------------~~~~~l~~~~~~Lkp 182 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDADKD-----------------------------------------NYLNYHKRLIDLVKV 182 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSCST-----------------------------------------THHHHHHHHHHHBCT
T ss_pred HHHHHhccCCCCCEEEEEEcCchH-----------------------------------------HHHHHHHHHHHhCCC
Confidence 3211 23899999652200 023678999999999
Q ss_pred CcEEEEEe
Q 043334 183 SGIMIFNM 190 (903)
Q Consensus 183 gG~ll~~~ 190 (903)
||++++..
T Consensus 183 GG~lv~d~ 190 (247)
T 1sui_A 183 GGVIGYDN 190 (247)
T ss_dssp TCCEEEEC
T ss_pred CeEEEEec
Confidence 99999854
No 387
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.24 E-value=4.7e-11 Score=134.17 Aligned_cols=131 Identities=14% Similarity=0.073 Sum_probs=101.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|++++..+++ .++++++++|+.+.
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 244 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL---------------ADRVTVAEGDFFKP 244 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC---------------TTTEEEEECCTTSC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC---------------CCceEEEeCCCCCc
Confidence 3578999999999999999999998899999999 9999999999987776 35899999999874
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.+ . .||+|+++...+..+ ......+++++.++|||||++++
T Consensus 245 ~~-~--~~D~v~~~~vl~~~~------------------------------------~~~~~~~l~~~~~~L~pgG~l~i 285 (374)
T 1qzz_A 245 LP-V--TADVVLLSFVLLNWS------------------------------------DEDALTILRGCVRALEPGGRLLV 285 (374)
T ss_dssp CS-C--CEEEEEEESCGGGSC------------------------------------HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CC-C--CCCEEEEeccccCCC------------------------------------HHHHHHHHHHHHHhcCCCcEEEE
Confidence 32 2 599998753332111 01123789999999999998887
Q ss_pred EeC--C--C----------------------CcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMG--G--R----------------------PGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~--~--~----------------------~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... . . .....+++++++.||+.++..
T Consensus 286 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 337 (374)
T 1qzz_A 286 LDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASER 337 (374)
T ss_dssp EECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEE
T ss_pred EechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 433 1 1 245566788999999988774
No 388
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.24 E-value=1.2e-11 Score=127.63 Aligned_cols=104 Identities=18% Similarity=0.298 Sum_probs=83.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++.... ++++++++|+.+..
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~------------------~~~~~~~~d~~~~~ 110 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRW------------------SHISWAATDILQFS 110 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTC------------------SSEEEEECCTTTCC
T ss_pred CCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccC------------------CCeEEEEcchhhCC
Confidence 5679999999999999999987 469999999999999999887432 37999999999887
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. .++||+|+++......++ .+.+..+++++.++|||||.+++.
T Consensus 111 ~--~~~fD~v~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 111 T--AELFDLIVVAEVLYYLED-----------------------------------MTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp C--SCCEEEEEEESCGGGSSS-----------------------------------HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred C--CCCccEEEEccHHHhCCC-----------------------------------HHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3 348999998643332111 112347899999999999999995
Q ss_pred e
Q 043334 190 M 190 (903)
Q Consensus 190 ~ 190 (903)
.
T Consensus 154 ~ 154 (216)
T 3ofk_A 154 S 154 (216)
T ss_dssp E
T ss_pred e
Confidence 4
No 389
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.24 E-value=2.1e-11 Score=133.04 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=95.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh--cccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYL--NALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~--~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.+.+|||+|||+|.++..+++..+..+|+++|+|+.+++.|++|+.. ++++ .++++++++|+.+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~--------------~~~v~~~~~D~~~ 155 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD--------------DPRAEIVIANGAE 155 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG--------------CTTEEEEESCHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC--------------CCceEEEECcHHH
Confidence 45899999999999999999876678999999999999999998754 2221 2589999999988
Q ss_pred cccCCCCceeEEEECCCCC-CCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 108 YCRDHDIQLERIVGCIPQI-LNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~-~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
......++||+|++|+|.. ..+. . .+. ...+++++.++|+|||++
T Consensus 156 ~l~~~~~~fD~Ii~d~~~~~~~~~---------~--------------~l~-----------~~~~l~~~~~~LkpgG~l 201 (296)
T 1inl_A 156 YVRKFKNEFDVIIIDSTDPTAGQG---------G--------------HLF-----------TEEFYQACYDALKEDGVF 201 (296)
T ss_dssp HGGGCSSCEEEEEEEC---------------------------------CC-----------SHHHHHHHHHHEEEEEEE
T ss_pred HHhhCCCCceEEEEcCCCcccCch---------h--------------hhh-----------HHHHHHHHHHhcCCCcEE
Confidence 6443334899999987642 1100 0 000 127899999999999999
Q ss_pred EEEeCCCC-cHH---HHHHHHHHCCCeEEEEEe
Q 043334 187 IFNMGGRP-GQG---VCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 187 l~~~~~~~-~~~---~l~~ll~~~gf~~~~~~~ 215 (903)
++..+... ... .+.+.+++. |..+..+.
T Consensus 202 v~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~ 233 (296)
T 1inl_A 202 SAETEDPFYDIGWFKLAYRRISKV-FPITRVYL 233 (296)
T ss_dssp EEECCCTTTTHHHHHHHHHHHHHH-CSEEEEEE
T ss_pred EEEccCcccCHHHHHHHHHHHHHH-CCceEEEE
Confidence 99876532 222 223344444 66655543
No 390
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.24 E-value=2.4e-11 Score=132.86 Aligned_cols=133 Identities=14% Similarity=0.093 Sum_probs=95.4
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccC
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD 111 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~ 111 (903)
.+|||||||+|.++..+++.+|+.+|+++|+|+.+++.|++++.... .++++++.+|..++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~----------------~~rv~v~~~Da~~~l~~ 154 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR----------------APRVKIRVDDARMVAES 154 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC----------------TTTEEEEESCHHHHHHT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC----------------CCceEEEECcHHHHHhh
Confidence 49999999999999999998888999999999999999999874321 25899999999887543
Q ss_pred C-CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEe
Q 043334 112 H-DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNM 190 (903)
Q Consensus 112 ~-~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~ 190 (903)
. .++||+|+++.+....... .+ . ...+++.+.++|+|||++++..
T Consensus 155 ~~~~~fDvIi~D~~~~~~~~~-~L----~-----------------------------t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 155 FTPASRDVIIRDVFAGAITPQ-NF----T-----------------------------TVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp CCTTCEEEEEECCSTTSCCCG-GG----S-----------------------------BHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCCEEEECCCCccccch-hh----h-----------------------------HHHHHHHHHHhcCCCcEEEEEe
Confidence 2 3489999987433211110 00 0 0278999999999999999987
Q ss_pred CCCCcHH---HHHHHHHHCCCeEEEEEe
Q 043334 191 GGRPGQG---VCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 191 ~~~~~~~---~l~~ll~~~gf~~~~~~~ 215 (903)
....... .+.+.+++. |..+..+.
T Consensus 201 ~~~~~~~~~~~~~~tL~~v-F~~v~~~~ 227 (317)
T 3gjy_A 201 GDHSDLRGAKSELAGMMEV-FEHVAVIA 227 (317)
T ss_dssp EECTTCHHHHHHHHHHHHH-CSEEEEEE
T ss_pred cCCcchHHHHHHHHHHHHH-CCceEEEE
Confidence 6443322 222334333 66655543
No 391
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.24 E-value=2.4e-11 Score=120.48 Aligned_cols=118 Identities=22% Similarity=0.233 Sum_probs=91.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.++++. +++++..+| ...
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------------------~~v~~~~~d-~~~- 71 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKF---------------------DSVITLSDP-KEI- 71 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHC---------------------TTSEEESSG-GGS-
T ss_pred CCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhC---------------------CCcEEEeCC-CCC-
Confidence 56799999999999999999875 39999999999999999872 479999999 222
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
. .++||+|+++......++ ...+++++.+.|||||.+++.
T Consensus 72 -~-~~~~D~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 72 -P-DNSVDFILFANSFHDMDD--------------------------------------KQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp -C-TTCEEEEEEESCSTTCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred -C-CCceEEEEEccchhcccC--------------------------------------HHHHHHHHHHhcCCCCEEEEE
Confidence 2 238999998754443211 127799999999999999985
Q ss_pred eCC------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MGG------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~~------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... ......++++++ ||++++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 112 DWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp EECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred EcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 321 124566777887 99988773
No 392
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.24 E-value=7.2e-11 Score=130.42 Aligned_cols=131 Identities=11% Similarity=0.115 Sum_probs=101.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.+|+.+++|+|++ .+++.|++++...++ .++++++.+|+.+..
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~ 228 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV---------------ASRYHTIAGSAFEVD 228 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC---------------GGGEEEEESCTTTSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC---------------CcceEEEecccccCC
Confidence 5689999999999999999999888999999999 999999999987765 257999999998764
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.+. .||+|+++-.... . ..+....+++++.+.|+|||++++.
T Consensus 229 ~~~--~~D~v~~~~~l~~------~------------------------------~~~~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 229 YGN--DYDLVLLPNFLHH------F------------------------------DVATCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp CCS--CEEEEEEESCGGG------S------------------------------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC--CCcEEEEcchhcc------C------------------------------CHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 332 5999986322211 1 1112337899999999999988874
Q ss_pred eCC--------------------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MGG--------------------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~~--------------------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... ......+++++++.||+.+++.
T Consensus 271 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 271 DFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp ECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred eecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 321 1235667889999999988873
No 393
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.24 E-value=2.6e-11 Score=134.42 Aligned_cols=115 Identities=14% Similarity=0.175 Sum_probs=87.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc--ccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN--ALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~--gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.+++|||+|||+|.++..+++..+..+|+++|+|+.+++.|++|+... +++ .++++++++|+.+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~--------------~~rv~~~~~D~~~ 185 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE--------------DPRVNLVIGDGVA 185 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG--------------STTEEEEESCHHH
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC--------------CCcEEEEECCHHH
Confidence 468999999999999999998766789999999999999999997642 331 2589999999988
Q ss_pred cccC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 108 YCRD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 108 ~~~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+... ..++||+|++|++..... .... ....+++++.++|+|||++
T Consensus 186 ~l~~~~~~~fDlIi~d~~~p~~~-----~~~l-----------------------------~~~~~l~~~~~~LkpgG~l 231 (334)
T 1xj5_A 186 FLKNAAEGSYDAVIVDSSDPIGP-----AKEL-----------------------------FEKPFFQSVARALRPGGVV 231 (334)
T ss_dssp HHHTSCTTCEEEEEECCCCTTSG-----GGGG-----------------------------GSHHHHHHHHHHEEEEEEE
T ss_pred HHHhccCCCccEEEECCCCccCc-----chhh-----------------------------hHHHHHHHHHHhcCCCcEE
Confidence 6432 124899999986532100 0000 0137899999999999999
Q ss_pred EEEeCC
Q 043334 187 IFNMGG 192 (903)
Q Consensus 187 l~~~~~ 192 (903)
++..+.
T Consensus 232 v~~~~~ 237 (334)
T 1xj5_A 232 CTQAES 237 (334)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 997544
No 394
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.23 E-value=3.2e-11 Score=134.13 Aligned_cols=106 Identities=19% Similarity=0.244 Sum_probs=85.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++++|||+|||+|.++..+++. +..+|+|+|+|+ |++.|+++++.+++ .++++++++|+.+.
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~---------------~~~i~~~~~d~~~~ 125 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKL---------------EDTITLIKGKIEEV 125 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTC---------------TTTEEEEESCTTTS
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCC---------------CCcEEEEEeeHHHh
Confidence 46789999999999999999986 456999999997 99999999988886 35899999999887
Q ss_pred ccCCCCceeEEEECC-CCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 109 CRDHDIQLERIVGCI-PQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 109 ~~~~~~~fD~Iv~Np-Py~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
..+. ++||+|++|+ +|..... ..+..+++++.++|||||.++
T Consensus 126 ~~~~-~~~D~Ivs~~~~~~l~~~------------------------------------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 126 HLPV-EKVDVIISEWMGYFLLFE------------------------------------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCSC-SCEEEEEECCCBTTBTTT------------------------------------CHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCC-CcEEEEEEcCchhhccCH------------------------------------HHHHHHHHHHHhhcCCCcEEE
Confidence 5442 3899999986 4543211 012367889999999999987
Q ss_pred E
Q 043334 188 F 188 (903)
Q Consensus 188 ~ 188 (903)
.
T Consensus 169 p 169 (340)
T 2fyt_A 169 P 169 (340)
T ss_dssp S
T ss_pred c
Confidence 3
No 395
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.23 E-value=8.2e-11 Score=138.45 Aligned_cols=199 Identities=13% Similarity=0.179 Sum_probs=119.7
Q ss_pred cccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhC---------------CCEEEEEeCCHHHHHHHH
Q 043334 7 IFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWL---------------PSKVYGLDINPRAIRISW 71 (903)
Q Consensus 7 vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~---------------~~~V~giDis~~al~~A~ 71 (903)
.|+|+.-...+.+.+.. ...+|||.|||||.+.+.+++... ..+++|+|+++.++++|+
T Consensus 227 fyTP~~Vv~lmv~ll~p------~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 227 YYTPKSIVTLIVEMLEP------YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp TCCCHHHHHHHHHHHCC------CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHhc------CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHH
Confidence 57887555555555432 123999999999999998766432 458999999999999999
Q ss_pred HHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCC-ccchhhHHhhhhhhhhhhhc
Q 043334 72 INLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPN-PDAMSKIITENASEEFLYSL 150 (903)
Q Consensus 72 ~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~-~~~l~~~~~~~~~~~~~~~l 150 (903)
.|+..+|++ .++.+.++|.+........+||+|++||||....- ...... +..+.+..
T Consensus 301 ~Nl~l~gi~---------------~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~------d~r~~~g~ 359 (544)
T 3khk_A 301 MNMVIRGID---------------FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLAD------DPRWTINT 359 (544)
T ss_dssp HHHHHTTCC---------------CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTT------CGGGEECC
T ss_pred HHHHHhCCC---------------cccceeccchhcCcccccccccEEEECCCcCCccccchhhhh------hhhhhcCc
Confidence 999998873 34555888877654333348999999999985321 111100 00010000
Q ss_pred cccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCC------CcHHHHHHHHHHCCCeEEEEEehhhhccCCC
Q 043334 151 SNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGR------PGQGVCKRLFERRGFRVDKLWQTKILQASEP 224 (903)
Q Consensus 151 ~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~------~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~~ 224 (903)
.+.... .+ ...+...+ .|++.+.+.|+|||++.+.++.. .....+++.+-+.+.-. .++. ....
T Consensus 360 ~~~~~~--~~-~~~~~~~~-~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l~-aII~-----LP~~ 429 (544)
T 3khk_A 360 NGEKRI--LT-PPTGNANF-AWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVE-CMVA-----LPGQ 429 (544)
T ss_dssp C--CEE--CC-CCTTCTHH-HHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCEE-EEEE-----CCTT
T ss_pred cccccc--cc-CCCcchhH-HHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCcHh-EEEE-----CCCC
Confidence 000000 00 00111112 68999999999999999877531 23455667776766432 2211 2234
Q ss_pred cccCCCCcc-eeeeeeccCC
Q 043334 225 FFASDTDIS-ALVEIEKNSP 243 (903)
Q Consensus 225 ~~~~~~~i~-~l~~~e~~~~ 243 (903)
.|. .+.+. .++.+.++.+
T Consensus 430 lF~-~t~i~t~Ilvl~K~k~ 448 (544)
T 3khk_A 430 LFT-NTQIPACIWFLTKDKN 448 (544)
T ss_dssp BCC-SCSSCEEEEEEESCCS
T ss_pred CCC-CCCCCeEEEEEecCCC
Confidence 444 45555 4566666543
No 396
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.22 E-value=1.4e-10 Score=128.37 Aligned_cols=130 Identities=11% Similarity=0.001 Sum_probs=101.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
+..+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|++++...++ .+++++..+|+.+..
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~ 232 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL---------------SGRAQVVVGSFFDPL 232 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC---------------TTTEEEEECCTTSCC
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc---------------CcCeEEecCCCCCCC
Confidence 467999999999999999999999999999999 9999999999977765 368999999998543
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
+ . +||+|+++-..+ .+ ..+...++++++++.|+|||++++.
T Consensus 233 p-~--~~D~v~~~~vlh-------------~~-----------------------~~~~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 233 P-A--GAGGYVLSAVLH-------------DW-----------------------DDLSAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp C-C--SCSEEEEESCGG-------------GS-----------------------CHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred C-C--CCcEEEEehhhc-------------cC-----------------------CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 2 799998532111 11 1112347899999999999999884
Q ss_pred eCC---------------------CCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MGG---------------------RPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~~---------------------~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
... ......++++++++||+.++.+
T Consensus 274 e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 319 (332)
T 3i53_A 274 EAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAH 319 (332)
T ss_dssp ECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred eecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 321 1235567889999999998874
No 397
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.22 E-value=1.1e-10 Score=121.76 Aligned_cols=126 Identities=17% Similarity=0.139 Sum_probs=92.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.|++.+++|+..+ ++++++++|+.+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~------------------~~v~~~~~d~~~ 133 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER------------------RNIVPILGDATK 133 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC------------------TTEEEEECCTTC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc------------------CCCEEEEccCCC
Confidence 4678999999999999999998864 479999999999999999988533 379999999987
Q ss_pred cc--cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcE
Q 043334 108 YC--RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGI 185 (903)
Q Consensus 108 ~~--~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ 185 (903)
.. ....++||+|++++|.. + . ...+++++.++|||||.
T Consensus 134 ~~~~~~~~~~~D~v~~~~~~~---~--------~-----------------------------~~~~l~~~~~~LkpgG~ 173 (227)
T 1g8a_A 134 PEEYRALVPKVDVIFEDVAQP---T--------Q-----------------------------AKILIDNAEVYLKRGGY 173 (227)
T ss_dssp GGGGTTTCCCEEEEEECCCST---T--------H-----------------------------HHHHHHHHHHHEEEEEE
T ss_pred cchhhcccCCceEEEECCCCH---h--------H-----------------------------HHHHHHHHHHhcCCCCE
Confidence 42 11223799999887611 0 0 11458899999999999
Q ss_pred EEEEeCCC-----C-----cHHHHHHHHHHCCCeEEEEE
Q 043334 186 MIFNMGGR-----P-----GQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 186 ll~~~~~~-----~-----~~~~l~~ll~~~gf~~~~~~ 214 (903)
+++..... . ....+.++ .+. |+..+..
T Consensus 174 l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~ 210 (227)
T 1g8a_A 174 GMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERL 210 (227)
T ss_dssp EEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEE
T ss_pred EEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEe
Confidence 99854221 1 11333444 555 8887663
No 398
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.22 E-value=5.2e-11 Score=126.45 Aligned_cols=151 Identities=11% Similarity=0.084 Sum_probs=100.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc--------------ccCCCCcchhhhccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL--------------DEKGQPIYDAEKKTL 94 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl--------------~~~~~~~~~~~~~~~ 94 (903)
.++.+|||+|||+|.++..+++... .+|+|+|+|+.|++.|++++..++. +.... ........+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRM-KGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCS-CHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhccccccc-chHHHHHHh
Confidence 4678999999999999999887632 4999999999999999998754320 00000 000000001
Q ss_pred CCcE-EEEEccccccccCCC---CceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHH
Q 043334 95 LDRV-EFHESDLLAYCRDHD---IQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIA 170 (903)
Q Consensus 95 ~~~v-~~~~gDl~~~~~~~~---~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~ 170 (903)
..++ .++++|+.+...... ++||+|+++-... .+ . .......
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~------~~----~------------------------~~~~~~~ 178 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLD------AA----C------------------------PDLPAYR 178 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH------HH----C------------------------SSHHHHH
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhh------hh----c------------------------CChHHHH
Confidence 1237 899999988643222 4899999641111 00 0 0112244
Q ss_pred HHHHHHhhcccCCcEEEEEeC---------------CCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 171 RAVEEGIGVIKPSGIMIFNMG---------------GRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 171 ~~l~~~~~~LkpgG~ll~~~~---------------~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.+++++.++|||||.+++... .....+.+.+++++.||+++....
T Consensus 179 ~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 179 TALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp HHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 889999999999999998531 123566778899999999988754
No 399
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.22 E-value=1e-11 Score=127.32 Aligned_cols=135 Identities=12% Similarity=0.139 Sum_probs=94.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|+++... .++++++++|+.+.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~------------------~~~i~~~~~d~~~~ 101 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH------------------VPQLRWETMDVRKL 101 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT------------------CTTCEEEECCTTSC
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc------------------CCCcEEEEcchhcC
Confidence 3678999999999999999998742 3999999999999999988742 14799999999886
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... .++||+|++|+++.......... |............+++++.++|||||.+++
T Consensus 102 ~~~-~~~fD~v~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 157 (215)
T 2pxx_A 102 DFP-SASFDVVLEKGTLDALLAGERDP-----------------------WTVSSEGVHTVDQVLSEVSRVLVPGGRFIS 157 (215)
T ss_dssp CSC-SSCEEEEEEESHHHHHTTTCSCT-----------------------TSCCHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCC-CCcccEEEECcchhhhccccccc-----------------------cccccchhHHHHHHHHHHHHhCcCCCEEEE
Confidence 433 24899999876653211000000 000001123345889999999999999999
Q ss_pred EeCCCCcHHHHHHHHHHCCC
Q 043334 189 NMGGRPGQGVCKRLFERRGF 208 (903)
Q Consensus 189 ~~~~~~~~~~l~~ll~~~gf 208 (903)
....... ..+.++...++
T Consensus 158 ~~~~~~~--~~~~~~~~~~~ 175 (215)
T 2pxx_A 158 MTSAAPH--FRTRHYAQAYY 175 (215)
T ss_dssp EESCCHH--HHHHHHCCGGG
T ss_pred EeCCCcH--HHHHHHhcccc
Confidence 8766532 23456656665
No 400
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.22 E-value=3.9e-11 Score=131.39 Aligned_cols=115 Identities=13% Similarity=0.140 Sum_probs=86.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh--cccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYL--NALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~--~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.+++|||+|||+|.++..+++..+..+|+++|+|+.+++.|++++.. ++++ .++++++.+|..+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~--------------~~rv~v~~~Da~~ 160 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS--------------SSKLTLHVGDGFE 160 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG--------------CTTEEEEESCHHH
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC--------------CCcEEEEECcHHH
Confidence 56899999999999999999876678999999999999999998754 2331 2589999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
......++||+|++|+|....+... .....+++++.++|+|||+++
T Consensus 161 ~l~~~~~~fD~Ii~d~~~~~~~~~~----------------------------------l~~~~~l~~~~~~LkpgG~lv 206 (304)
T 2o07_A 161 FMKQNQDAFDVIITDSSDPMGPAES----------------------------------LFKESYYQLMKTALKEDGVLC 206 (304)
T ss_dssp HHHTCSSCEEEEEEECC---------------------------------------------CHHHHHHHHHEEEEEEEE
T ss_pred HHhhCCCCceEEEECCCCCCCcchh----------------------------------hhHHHHHHHHHhccCCCeEEE
Confidence 6443345899999987653211100 001268999999999999999
Q ss_pred EEeCC
Q 043334 188 FNMGG 192 (903)
Q Consensus 188 ~~~~~ 192 (903)
+....
T Consensus 207 ~~~~~ 211 (304)
T 2o07_A 207 CQGEC 211 (304)
T ss_dssp EEEEC
T ss_pred EecCC
Confidence 97643
No 401
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.22 E-value=5.1e-11 Score=127.65 Aligned_cols=82 Identities=24% Similarity=0.389 Sum_probs=65.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHH------HHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEE
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPR------AIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFH 101 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~------al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~ 101 (903)
.++.+|||+|||+|.++..+++.. +..+|+|+|+|+. +++.|++++..+++ .++++++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~---------------~~~v~~~ 106 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL---------------GDRLTVH 106 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT---------------GGGEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC---------------CCceEEE
Confidence 367899999999999999999986 4589999999997 99999999987765 2579999
Q ss_pred Ecc-cc--ccccCCCCceeEEEECCCCC
Q 043334 102 ESD-LL--AYCRDHDIQLERIVGCIPQI 126 (903)
Q Consensus 102 ~gD-l~--~~~~~~~~~fD~Iv~NpPy~ 126 (903)
++| +. ..+.. .++||+|+++.++.
T Consensus 107 ~~d~~~~~~~~~~-~~~fD~v~~~~~l~ 133 (275)
T 3bkx_A 107 FNTNLSDDLGPIA-DQHFDRVVLAHSLW 133 (275)
T ss_dssp CSCCTTTCCGGGT-TCCCSEEEEESCGG
T ss_pred ECChhhhccCCCC-CCCEEEEEEccchh
Confidence 998 32 22222 24899999875554
No 402
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.22 E-value=4.6e-11 Score=134.74 Aligned_cols=106 Identities=21% Similarity=0.245 Sum_probs=86.5
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..++++|||+|||+|.+++.+++. +..+|+|+|+| .|++.|++++..+++ .++++++++|+.+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~ 123 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNL---------------DHIVEVIEGSVED 123 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTC---------------TTTEEEEESCGGG
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCC---------------CCeEEEEECchhh
Confidence 457899999999999999999987 34499999999 999999999998887 3579999999998
Q ss_pred cccCCCCceeEEEECC-CCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 108 YCRDHDIQLERIVGCI-PQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~Np-Py~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+..+ ++||+|++|+ +|+..... ....+++++.++|||||.+
T Consensus 124 ~~~~--~~~D~Iv~~~~~~~l~~e~------------------------------------~~~~~l~~~~~~LkpgG~l 165 (376)
T 3r0q_C 124 ISLP--EKVDVIISEWMGYFLLRES------------------------------------MFDSVISARDRWLKPTGVM 165 (376)
T ss_dssp CCCS--SCEEEEEECCCBTTBTTTC------------------------------------THHHHHHHHHHHEEEEEEE
T ss_pred cCcC--CcceEEEEcChhhcccchH------------------------------------HHHHHHHHHHhhCCCCeEE
Confidence 8655 4899999986 34422110 0226788999999999999
Q ss_pred EE
Q 043334 187 IF 188 (903)
Q Consensus 187 l~ 188 (903)
++
T Consensus 166 i~ 167 (376)
T 3r0q_C 166 YP 167 (376)
T ss_dssp ES
T ss_pred EE
Confidence 87
No 403
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.22 E-value=2.9e-11 Score=126.03 Aligned_cols=105 Identities=12% Similarity=0.141 Sum_probs=85.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++++|||+|||+|..++.+++.++ +.+|+++|+++.+++.|++++..+++ .++++++++|+.+.
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~---------------~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA---------------EHKIDLRLKPALET 133 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC---------------TTTEEEEESCHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC---------------CCeEEEEEcCHHHH
Confidence 468999999999999999999876 67999999999999999999988876 25899999998765
Q ss_pred ccC---CC--CceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 109 CRD---HD--IQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 109 ~~~---~~--~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
... .. ++||+|+++++.. .+..+++++.++|+||
T Consensus 134 ~~~~~~~~~~~~~D~v~~d~~~~-----------------------------------------~~~~~l~~~~~~L~pg 172 (229)
T 2avd_A 134 LDELLAAGEAGTFDVAVVDADKE-----------------------------------------NCSAYYERCLQLLRPG 172 (229)
T ss_dssp HHHHHHTTCTTCEEEEEECSCST-----------------------------------------THHHHHHHHHHHEEEE
T ss_pred HHHHHhcCCCCCccEEEECCCHH-----------------------------------------HHHHHHHHHHHHcCCC
Confidence 321 11 3899999876511 0226789999999999
Q ss_pred cEEEEEe
Q 043334 184 GIMIFNM 190 (903)
Q Consensus 184 G~ll~~~ 190 (903)
|.+++..
T Consensus 173 G~lv~~~ 179 (229)
T 2avd_A 173 GILAVLR 179 (229)
T ss_dssp EEEEEEC
T ss_pred eEEEEEC
Confidence 9999853
No 404
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.22 E-value=1e-10 Score=137.86 Aligned_cols=189 Identities=13% Similarity=0.111 Sum_probs=117.7
Q ss_pred cccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhC------------------CCEEEEEeCCHHHHH
Q 043334 7 IFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWL------------------PSKVYGLDINPRAIR 68 (903)
Q Consensus 7 vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~------------------~~~V~giDis~~al~ 68 (903)
.|.|+.-...+.+.+.. .++.+|+|+|||||.+.+.+++... ..+++|+|+++.+++
T Consensus 151 fyTP~~iv~~mv~~l~p-----~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~ 225 (541)
T 2ar0_A 151 YFTPRPLIKTIIHLLKP-----QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRR 225 (541)
T ss_dssp CCCCHHHHHHHHHHHCC-----CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHH
T ss_pred eeCCHHHHHHHHHHhcc-----CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHH
Confidence 67887544444444432 2467999999999999999887642 247999999999999
Q ss_pred HHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhh
Q 043334 69 ISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLY 148 (903)
Q Consensus 69 ~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~ 148 (903)
+|+.|+..+|++.. ...++.+.++|.+........+||+|++||||........ .. .+
T Consensus 226 lA~~nl~l~gi~~~-----------~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~-----~~----~~-- 283 (541)
T 2ar0_A 226 LALMNCLLHDIEGN-----------LDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNI-----TR----TF-- 283 (541)
T ss_dssp HHHHHHHTTTCCCB-----------GGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCC-----CS----CC--
T ss_pred HHHHHHHHhCCCcc-----------ccccCCeEeCCCcccccccccCCeEEEECCCcccccchhh-----Hh----hc--
Confidence 99999998886200 0013778999987654322238999999999986543220 00 00
Q ss_pred hccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCC-----CcHHHHHHHHHHCCCeEEEEEehhhhccCC
Q 043334 149 SLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGR-----PGQGVCKRLFERRGFRVDKLWQTKILQASE 223 (903)
Q Consensus 149 ~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~-----~~~~~l~~ll~~~gf~~~~~~~~~~~~~~~ 223 (903)
+ + ..+ .....+++.+.+.|||||++.+.++.. .....+++.+.+.+ .+..++ ....
T Consensus 284 ---------~-~--~~~-~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~~-~l~~ii-----~Lp~ 344 (541)
T 2ar0_A 284 ---------V-H--PTS-NKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKC-HLHTIL-----RLPT 344 (541)
T ss_dssp ---------S-S--CCS-CHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHE-EEEEEE-----ECCS
T ss_pred ---------C-C--CCC-chHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHHhhcC-CEEEEE-----EcCc
Confidence 0 0 000 112278999999999999999976532 12234455555543 222221 1223
Q ss_pred CcccCCCCcc-eeeeeeccC
Q 043334 224 PFFASDTDIS-ALVEIEKNS 242 (903)
Q Consensus 224 ~~~~~~~~i~-~l~~~e~~~ 242 (903)
..|+ .+.+. .++.+.++.
T Consensus 345 ~~F~-~t~v~t~Ilvl~k~~ 363 (541)
T 2ar0_A 345 GIFY-AQGVKTNVLFFTKGT 363 (541)
T ss_dssp SCSS-SCSCCEEEEEEEEBC
T ss_pred Cccc-CCCCcEEEEEEECCC
Confidence 3443 44444 456666654
No 405
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.22 E-value=1.1e-10 Score=139.39 Aligned_cols=245 Identities=10% Similarity=0.099 Sum_probs=137.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC---CCEEEEEeCCHHHHHHH--HHHHHhcccccCCCCcchhhhcccCCcEEEEEc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL---PSKVYGLDINPRAIRIS--WINLYLNALDEKGQPIYDAEKKTLLDRVEFHES 103 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~---~~~V~giDis~~al~~A--~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~g 103 (903)
.++.+|||+|||||.+.+.+++..+ ..+++|+|+++.+++.| +.|+..+++. .. .....+...
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Ll-----------hG-i~~~~I~~d 387 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLV-----------SS-NNAPTITGE 387 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTC-----------BT-TBCCEEECC
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhh-----------cC-CCcceEEec
Confidence 3578999999999999999998764 35899999999999999 7776654331 00 012456677
Q ss_pred cccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 104 DLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 104 Dl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
|+.+......++||+||+||||.......... ... ...+...... .... .....+.+..|++.+.+.|+||
T Consensus 388 D~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~---kd~-~~r~~~g~p~---~p~s--~~G~~DLy~aFIe~Al~lLKpG 458 (878)
T 3s1s_A 388 DVCSLNPEDFANVSVVVMNPPYVSGVTDPAIK---RKF-AHKIIQLTGN---RPQT--LFGQIGVEALFLELVTELVQDG 458 (878)
T ss_dssp CGGGCCGGGGTTEEEEEECCBCCSSCCCHHHH---HHH-HHHHHHHHSS---CCSS--CSSSCCHHHHHHHHHHHHSCTT
T ss_pred chhcccccccCCCCEEEECCCccccccchhhh---hhH-HHHhhhhccc---cccc--cccccchHHHHHHHHHHhcCCC
Confidence 77764322234899999999998543321111 110 0000000000 0000 1122345678999999999999
Q ss_pred cEEEEEeCCCCc------HHHHHHHHHHCCCeEEEEEehhhhccCCCcccCCCCc-ceeeeeeccCCc-ceeEEeccc--
Q 043334 184 GIMIFNMGGRPG------QGVCKRLFERRGFRVDKLWQTKILQASEPFFASDTDI-SALVEIEKNSPH-RFEFFMGLS-- 253 (903)
Q Consensus 184 G~ll~~~~~~~~------~~~l~~ll~~~gf~~~~~~~~~~~~~~~~~~~~~~~i-~~l~~~e~~~~~-~f~f~~~~~-- 253 (903)
|++.+.++.... ...+++.+.+.+ .+..++. .....+|.+... ..++.+.++.+. ...|+....
T Consensus 459 GrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~-~I~aIId-----LP~~~~F~~asv~T~ILIlrK~k~t~kV~FIdl~~pl 532 (878)
T 3s1s_A 459 TVISAIMPKQYLTAQGNESKAFREFLVGNF-GLEHIFL-----YPREGLFEEVIKDTVVFVGRKGSSVEEIEVLDSFTPL 532 (878)
T ss_dssp CEEEEEEETHHHHCCSHHHHHHHHHHTTTT-CEEEEEE-----CCBCCSSCSCBCCEEEEEEETTCCCSEEEEEEECSCG
T ss_pred cEEEEEEChHHhccCChHHHHHHHHHHhCC-CeEEEEE-----CCCccccCCCCCcEEEEEEEcCCCCCceEEEEcCCCc
Confidence 999998765321 334455554443 3323321 122234554443 345566665443 333333221
Q ss_pred -CCCcccHHHHHHhhhcCcceeee-eeeeeccccCchhHHHHHHHHhcccccccc
Q 043334 254 -GDLPICARTAWAYGKAGGRISHA-LSVYSCQLHQPNQVKKIFKFLKNGFHEISS 306 (903)
Q Consensus 254 -~~~p~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~ 306 (903)
...--..+.+|...+..+.|.+- +.+ +.....++...++.|++.+.+
T Consensus 533 ~~idl~~f~~al~~~k~~~~i~s~~~DL------~~~~~~~i~~~vk~G~~~~~~ 581 (878)
T 3s1s_A 533 EQVDLHNLKRALSNSSNEQIIQPMGMEL------RKEKREELENRVTVGWRHITS 581 (878)
T ss_dssp GGCCHHHHHHHHHHCCSSCCCCCTTEEE------EEEEHHHHHHTTTTCSGGGCS
T ss_pred ccccHHHHHHHHhhhccccccccccccc------ccccHHHHHHHhhhhhhhhhc
Confidence 11223345566666665544431 111 233455777777788876553
No 406
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.22 E-value=6.9e-11 Score=127.90 Aligned_cols=155 Identities=12% Similarity=0.105 Sum_probs=98.1
Q ss_pred HHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHHHHhcccccCCCCcchhhhccc
Q 043334 16 TFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDI-NPRAIRISWINLYLNALDEKGQPIYDAEKKTL 94 (903)
Q Consensus 16 ~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDi-s~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~ 94 (903)
.+.+.+..... ..++++|||+|||+|.+++.+++. +..+|+|+|+ |+.|++.|++|+..|.....+. ...-
T Consensus 66 ~l~~~l~~~~~-~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~------~~~~ 137 (281)
T 3bzb_A 66 ALADTLCWQPE-LIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSS------ETVK 137 (281)
T ss_dssp HHHHHHHHCGG-GTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC---------------
T ss_pred HHHHHHHhcch-hcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhccc------ccCC
Confidence 33444443321 246789999999999999998876 3449999999 8999999999995543210000 0000
Q ss_pred CCcEEEEEcccccc---ccC--CCCceeEEEE-CCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHH
Q 043334 95 LDRVEFHESDLLAY---CRD--HDIQLERIVG-CIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGL 168 (903)
Q Consensus 95 ~~~v~~~~gDl~~~---~~~--~~~~fD~Iv~-NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~ 168 (903)
.+++++...|+.+. ... ..++||+|++ ++.|... .
T Consensus 138 ~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~---------------------------------------~ 178 (281)
T 3bzb_A 138 RASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQ---------------------------------------A 178 (281)
T ss_dssp -CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGG---------------------------------------G
T ss_pred CCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChH---------------------------------------H
Confidence 13688886665432 110 1238999986 4444310 0
Q ss_pred HHHHHHHHhhccc---C--CcEEEEEeCCCC-----cHHHHHHHHHHCC-CeEEEEEehh
Q 043334 169 IARAVEEGIGVIK---P--SGIMIFNMGGRP-----GQGVCKRLFERRG-FRVDKLWQTK 217 (903)
Q Consensus 169 ~~~~l~~~~~~Lk---p--gG~ll~~~~~~~-----~~~~l~~ll~~~g-f~~~~~~~~~ 217 (903)
+..+++.+.++|+ | ||++++...... ....+.+.+++.| |.+..+....
T Consensus 179 ~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~~~~ 238 (281)
T 3bzb_A 179 HDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWLSPL 238 (281)
T ss_dssp HHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEEECCC
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEecccc
Confidence 2367899999999 9 998877544322 1223345788999 9998875443
No 407
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.21 E-value=1.5e-10 Score=121.58 Aligned_cols=129 Identities=17% Similarity=0.111 Sum_probs=89.9
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
+.++.+|||+|||+|..+..+++..+ ..+|+|+|+++.|++...+.+... .++.++++|+.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r------------------~nv~~i~~Da~ 135 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR------------------PNIFPLLADAR 135 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC------------------TTEEEEECCTT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc------------------CCeEEEEcccc
Confidence 45789999999999999999998764 569999999999986554443221 37999999997
Q ss_pred ccccC--CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc
Q 043334 107 AYCRD--HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG 184 (903)
Q Consensus 107 ~~~~~--~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG 184 (903)
.+... ..++||+|++|.+.. + . ...+.+.+.++|||||
T Consensus 136 ~~~~~~~~~~~~D~I~~d~a~~---~-------~------------------------------~~il~~~~~~~LkpGG 175 (232)
T 3id6_C 136 FPQSYKSVVENVDVLYVDIAQP---D-------Q------------------------------TDIAIYNAKFFLKVNG 175 (232)
T ss_dssp CGGGTTTTCCCEEEEEECCCCT---T-------H------------------------------HHHHHHHHHHHEEEEE
T ss_pred cchhhhccccceEEEEecCCCh---h-------H------------------------------HHHHHHHHHHhCCCCe
Confidence 65321 124899999875431 0 0 0123455666999999
Q ss_pred EEEEEeCCCC---------cHHHHHHHHHHCCCeEEEEE
Q 043334 185 IMIFNMGGRP---------GQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 185 ~ll~~~~~~~---------~~~~l~~ll~~~gf~~~~~~ 214 (903)
++++.+.... ......+.+++.||++.+..
T Consensus 176 ~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~ 214 (232)
T 3id6_C 176 DMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQII 214 (232)
T ss_dssp EEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEE
T ss_pred EEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEe
Confidence 9998642211 11223467888899988774
No 408
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.21 E-value=1e-10 Score=131.50 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=102.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|++++...++ .+++++..+|+.+.
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l---------------~~~v~~~~~d~~~~ 264 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL---------------ADRCEILPGDFFET 264 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC---------------TTTEEEEECCTTTC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc---------------CCceEEeccCCCCC
Confidence 3568999999999999999999999999999999 9999999999987765 36899999999854
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.+. .||+|+++-..+. . ..+...++++++.+.|||||++++
T Consensus 265 ~p~---~~D~v~~~~vlh~------~------------------------------~d~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 265 IPD---GADVYLIKHVLHD------W------------------------------DDDDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp CCS---SCSEEEEESCGGG------S------------------------------CHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCC---CceEEEhhhhhcc------C------------------------------CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 322 7999986422211 1 111123789999999999999998
Q ss_pred EeCC-----------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGG-----------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~-----------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.... ......+++++++.||+.++++.
T Consensus 306 ~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 306 IDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp EEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred EEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 3211 12355677899999999988854
No 409
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.21 E-value=1.5e-11 Score=123.81 Aligned_cols=87 Identities=10% Similarity=-0.010 Sum_probs=68.6
Q ss_pred hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhc
Q 043334 13 WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKK 92 (903)
Q Consensus 13 w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~ 92 (903)
+...||.....+-. +..+|||+|||+|.+++.++...|+.+|+|+|+|+.|++.+++|+..+|.+
T Consensus 35 ~ld~fY~~~~~~l~---~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~------------ 99 (200)
T 3fzg_A 35 TLNDFYTYVFGNIK---HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT------------ 99 (200)
T ss_dssp GHHHHHHHHHHHSC---CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS------------
T ss_pred hHHHHHHHHHhhcC---CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC------------
Confidence 55566666443322 467999999999999999999888899999999999999999999998872
Q ss_pred ccCCcEEEEEccccccccCCCCceeEEEE
Q 043334 93 TLLDRVEFHESDLLAYCRDHDIQLERIVG 121 (903)
Q Consensus 93 ~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~ 121 (903)
.++.+ .|.....++ ++||+|+.
T Consensus 100 ---~~v~~--~d~~~~~~~--~~~DvVLa 121 (200)
T 3fzg_A 100 ---IKYRF--LNKESDVYK--GTYDVVFL 121 (200)
T ss_dssp ---SEEEE--ECCHHHHTT--SEEEEEEE
T ss_pred ---ccEEE--ecccccCCC--CCcChhhH
Confidence 35666 666555433 38999984
No 410
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.21 E-value=3.2e-11 Score=130.53 Aligned_cols=141 Identities=13% Similarity=0.137 Sum_probs=94.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc--ccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN--ALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~--gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
++++|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++ .. ++. ........++++++.+|+.+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~-------~~~~~~~~~~v~~~~~D~~~ 145 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLL-------EAMLNGKHEKAKLTIGDGFE 145 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHH-------HHHHTTCCSSEEEEESCHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccc-------cccccCCCCcEEEEECchHH
Confidence 4689999999999999999987 7789999999999999999987 32 210 00000012589999999987
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.... .++||+|++|+|....+... . ....+++.+.++|+|||+++
T Consensus 146 ~l~~-~~~fD~Ii~d~~~~~~~~~~-----l-----------------------------~~~~~l~~~~~~L~pgG~lv 190 (281)
T 1mjf_A 146 FIKN-NRGFDVIIADSTDPVGPAKV-----L-----------------------------FSEEFYRYVYDALNNPGIYV 190 (281)
T ss_dssp HHHH-CCCEEEEEEECCCCC----------T-----------------------------TSHHHHHHHHHHEEEEEEEE
T ss_pred Hhcc-cCCeeEEEECCCCCCCcchh-----h-----------------------------hHHHHHHHHHHhcCCCcEEE
Confidence 6433 34899999998753211000 0 01267899999999999999
Q ss_pred EEeCCC-CcHHHHH---HHHHHCCCeEEEEEe
Q 043334 188 FNMGGR-PGQGVCK---RLFERRGFRVDKLWQ 215 (903)
Q Consensus 188 ~~~~~~-~~~~~l~---~ll~~~gf~~~~~~~ 215 (903)
+..+.. .....++ +.+++. |..+..+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~~-f~~v~~~~ 221 (281)
T 1mjf_A 191 TQAGSVYLFTDELISAYKEMKKV-FDRVYYYS 221 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHH-CSEEEEEE
T ss_pred EEcCCcccCHHHHHHHHHHHHHH-CCceEEEE
Confidence 976542 2223222 233333 66655543
No 411
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.21 E-value=1.4e-10 Score=129.88 Aligned_cols=131 Identities=17% Similarity=0.185 Sum_probs=101.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|++++..+++ .++++++.+|+.+.
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV---------------ADRMRGIAVDIYKE 252 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC---------------TTTEEEEECCTTTS
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC---------------CCCEEEEeCccccC
Confidence 4578999999999999999999998899999999 9999999999987766 25799999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+.+ .+|+|+++-..... ..+....+++++.+.|||||++++
T Consensus 253 ~~~---~~D~v~~~~vlh~~------------------------------------~d~~~~~~l~~~~~~L~pgG~l~i 293 (359)
T 1x19_A 253 SYP---EADAVLFCRILYSA------------------------------------NEQLSTIMCKKAFDAMRSGGRLLI 293 (359)
T ss_dssp CCC---CCSEEEEESCGGGS------------------------------------CHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCC---CCCEEEEechhccC------------------------------------CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 433 34999864222211 111234789999999999999976
Q ss_pred Ee---------------------C-C-C----CcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NM---------------------G-G-R----PGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~---------------------~-~-~----~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.. + . . .....++++++++||+.++..
T Consensus 294 ~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~ 346 (359)
T 1x19_A 294 LDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMV 346 (359)
T ss_dssp EEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEE
T ss_pred EecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEE
Confidence 33 1 1 1 345566788999999988774
No 412
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.21 E-value=6.3e-12 Score=133.11 Aligned_cols=104 Identities=16% Similarity=0.168 Sum_probs=85.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++++|||+|||+|..++.+++..+ +.+|+|+|+++++++.|++|+..+++ .++++++++|+.+.
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---------------~~~i~~~~gda~~~ 124 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ---------------EHKIKLRLGPALDT 124 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC---------------TTTEEEEESCHHHH
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCcEEEEEcCHHHH
Confidence 467999999999999999999875 78999999999999999999988887 35899999999876
Q ss_pred ccCC-----CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 109 CRDH-----DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 109 ~~~~-----~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
.... .++||+|+++.+. . .+..+++++.++||||
T Consensus 125 l~~~~~~~~~~~fD~V~~d~~~--------------~---------------------------~~~~~l~~~~~~LkpG 163 (242)
T 3r3h_A 125 LHSLLNEGGEHQFDFIFIDADK--------------T---------------------------NYLNYYELALKLVTPK 163 (242)
T ss_dssp HHHHHHHHCSSCEEEEEEESCG--------------G---------------------------GHHHHHHHHHHHEEEE
T ss_pred HHHHhhccCCCCEeEEEEcCCh--------------H---------------------------HhHHHHHHHHHhcCCC
Confidence 4421 2489999865320 0 0226789999999999
Q ss_pred cEEEEE
Q 043334 184 GIMIFN 189 (903)
Q Consensus 184 G~ll~~ 189 (903)
|++++.
T Consensus 164 G~lv~d 169 (242)
T 3r3h_A 164 GLIAID 169 (242)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 999995
No 413
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.21 E-value=7.6e-11 Score=133.25 Aligned_cols=82 Identities=24% Similarity=0.361 Sum_probs=71.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCC--------------------------------------CEEEEEeCCHHHHHHH
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLP--------------------------------------SKVYGLDINPRAIRIS 70 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~--------------------------------------~~V~giDis~~al~~A 70 (903)
.++.+|||+|||||.+++.+|....+ .+|+|+|+|+.|++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 36789999999999999999887432 5799999999999999
Q ss_pred HHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCC
Q 043334 71 WINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQIL 127 (903)
Q Consensus 71 ~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~ 127 (903)
++|+..+|++ +++++.++|+.+...+. +||+||+||||..
T Consensus 274 r~Na~~~gl~---------------~~i~~~~~D~~~l~~~~--~~D~Iv~NPPyg~ 313 (385)
T 3ldu_A 274 RENAEIAGVD---------------EYIEFNVGDATQFKSED--EFGFIITNPPYGE 313 (385)
T ss_dssp HHHHHHHTCG---------------GGEEEEECCGGGCCCSC--BSCEEEECCCCCC
T ss_pred HHHHHHcCCC---------------CceEEEECChhhcCcCC--CCcEEEECCCCcC
Confidence 9999999872 47999999999986543 8999999999983
No 414
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.20 E-value=4.3e-11 Score=131.55 Aligned_cols=137 Identities=16% Similarity=0.122 Sum_probs=95.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc--ccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN--ALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~--gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.+++|||+|||+|.++..+++..+..+|+++|+|+.+++.|++++... +++ .++++++.+|+.+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~--------------~~rv~~~~~D~~~ 173 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS--------------HPKLDLFCGDGFE 173 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG--------------CTTEEEECSCHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccC--------------CCCEEEEEChHHH
Confidence 457999999999999999998767789999999999999999987543 221 2589999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHH-HHHHHHHhhcccCCcEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLI-ARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~-~~~l~~~~~~LkpgG~l 186 (903)
......++||+|++|++....+.. .++ ..+++++.++|+|||++
T Consensus 174 ~l~~~~~~fD~Ii~d~~~~~~~~~-----------------------------------~l~t~~~l~~~~~~LkpgG~l 218 (314)
T 2b2c_A 174 FLKNHKNEFDVIITDSSDPVGPAE-----------------------------------SLFGQSYYELLRDALKEDGIL 218 (314)
T ss_dssp HHHHCTTCEEEEEECCC------------------------------------------------HHHHHHHHEEEEEEE
T ss_pred HHHhcCCCceEEEEcCCCCCCcch-----------------------------------hhhHHHHHHHHHhhcCCCeEE
Confidence 643333489999988753211100 001 37899999999999999
Q ss_pred EEEeCCCC-cHHH---HHHHHHHCCCeEEEEEeh
Q 043334 187 IFNMGGRP-GQGV---CKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 187 l~~~~~~~-~~~~---l~~ll~~~gf~~~~~~~~ 216 (903)
++..+... .... +.+.+++. |..+..+..
T Consensus 219 v~~~~~~~~~~~~~~~~~~~l~~v-F~~v~~~~~ 251 (314)
T 2b2c_A 219 SSQGESVWLHLPLIAHLVAFNRKI-FPAVTYAQS 251 (314)
T ss_dssp EEECCCTTTCHHHHHHHHHHHHHH-CSEEEEEEE
T ss_pred EEECCCcccCHHHHHHHHHHHHHH-CCcceEEEE
Confidence 99875532 2222 22334443 666655433
No 415
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.20 E-value=1.2e-10 Score=131.21 Aligned_cols=82 Identities=21% Similarity=0.274 Sum_probs=71.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCC--------------------------------------CEEEEEeCCHHHHHHH
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLP--------------------------------------SKVYGLDINPRAIRIS 70 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~--------------------------------------~~V~giDis~~al~~A 70 (903)
.++..++|++||||.+++.+|....+ .+|+|+|+|+.|++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 35789999999999999998876543 4699999999999999
Q ss_pred HHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCC
Q 043334 71 WINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQIL 127 (903)
Q Consensus 71 ~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~ 127 (903)
++|+..+|++ +++++.++|+.+..... +||+||+||||..
T Consensus 273 r~Na~~~gl~---------------~~I~~~~~D~~~l~~~~--~fD~Iv~NPPYG~ 312 (384)
T 3ldg_A 273 RKNAREVGLE---------------DVVKLKQMRLQDFKTNK--INGVLISNPPYGE 312 (384)
T ss_dssp HHHHHHTTCT---------------TTEEEEECCGGGCCCCC--CSCEEEECCCCTT
T ss_pred HHHHHHcCCC---------------CceEEEECChHHCCccC--CcCEEEECCchhh
Confidence 9999999873 57999999999986543 8999999999974
No 416
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.20 E-value=3.8e-11 Score=125.08 Aligned_cols=108 Identities=16% Similarity=0.204 Sum_probs=83.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-----CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-----PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHES 103 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-----~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~g 103 (903)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++.+++.|++|+..++++.. ..++++++++
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-----------~~~~v~~~~~ 147 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELL-----------KIDNFKIIHK 147 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGG-----------SSTTEEEEEC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcccc-----------ccCCEEEEEC
Confidence 3678999999999999999999863 46999999999999999999987762000 0147999999
Q ss_pred cccccc----cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhc
Q 043334 104 DLLAYC----RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGV 179 (903)
Q Consensus 104 Dl~~~~----~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~ 179 (903)
|+.+.. ... ++||+|+++.+.. .+++++.+.
T Consensus 148 d~~~~~~~~~~~~-~~fD~I~~~~~~~--------------------------------------------~~~~~~~~~ 182 (227)
T 2pbf_A 148 NIYQVNEEEKKEL-GLFDAIHVGASAS--------------------------------------------ELPEILVDL 182 (227)
T ss_dssp CGGGCCHHHHHHH-CCEEEEEECSBBS--------------------------------------------SCCHHHHHH
T ss_pred ChHhcccccCccC-CCcCEEEECCchH--------------------------------------------HHHHHHHHh
Confidence 998753 222 3799999764432 124567889
Q ss_pred ccCCcEEEEEeCC
Q 043334 180 IKPSGIMIFNMGG 192 (903)
Q Consensus 180 LkpgG~ll~~~~~ 192 (903)
|||||++++.++.
T Consensus 183 LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 183 LAENGKLIIPIEE 195 (227)
T ss_dssp EEEEEEEEEEEEE
T ss_pred cCCCcEEEEEEcc
Confidence 9999999998764
No 417
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.20 E-value=1.5e-10 Score=128.95 Aligned_cols=131 Identities=16% Similarity=0.124 Sum_probs=101.2
Q ss_pred CCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR 110 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~ 110 (903)
+.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|++++...++ .++++++.+|+.+...
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL---------------GGRVEFFEKNLLDARN 243 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC---------------GGGEEEEECCTTCGGG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC---------------CCceEEEeCCcccCcc
Confidence 78999999999999999999999999999999 8899999999887765 2579999999988751
Q ss_pred CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEe
Q 043334 111 DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNM 190 (903)
Q Consensus 111 ~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~ 190 (903)
...+.||+|+++-..+. + ..+....+++++.+.|||||++++..
T Consensus 244 ~~~~~~D~v~~~~vlh~-------------~-----------------------~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 244 FEGGAADVVMLNDCLHY-------------F-----------------------DAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp GTTCCEEEEEEESCGGG-------------S-----------------------CHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCccEEEEeccccc-------------C-----------------------CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 11226999986422111 1 11123478999999999999998832
Q ss_pred C--------------------------CCCcHHHHHHHHHHCCCeEEEE
Q 043334 191 G--------------------------GRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 191 ~--------------------------~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
. .......+++++++.||++++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 288 MTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp ECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred eccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 1 1224556788999999998874
No 418
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.20 E-value=6.1e-11 Score=133.08 Aligned_cols=130 Identities=12% Similarity=0.037 Sum_probs=99.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
...+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|++++...++ .++++++.+|+.+..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~ 242 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG---------------SERIHGHGANLLDRD 242 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT---------------GGGEEEEECCCCSSS
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc---------------ccceEEEEccccccC
Confidence 567999999999999999999999999999999 9999999999876665 258999999998852
Q ss_pred --cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 110 --RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 110 --~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.+ ++||+|+++-.... ...+....+++++.+.|||||+++
T Consensus 243 ~~~p--~~~D~v~~~~vlh~------------------------------------~~~~~~~~~l~~~~~~L~pgG~l~ 284 (363)
T 3dp7_A 243 VPFP--TGFDAVWMSQFLDC------------------------------------FSEEEVISILTRVAQSIGKDSKVY 284 (363)
T ss_dssp CCCC--CCCSEEEEESCSTT------------------------------------SCHHHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCC--CCcCEEEEechhhh------------------------------------CCHHHHHHHHHHHHHhcCCCcEEE
Confidence 22 37999985321111 011123378999999999999998
Q ss_pred EEeCC-----------------------------CCcHHHHHHHHHHCCCeEEEE
Q 043334 188 FNMGG-----------------------------RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 188 ~~~~~-----------------------------~~~~~~l~~ll~~~gf~~~~~ 213 (903)
+.... ......++++++++||+.+++
T Consensus 285 i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~ 339 (363)
T 3dp7_A 285 IMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEI 339 (363)
T ss_dssp EEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCC
T ss_pred EEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEE
Confidence 83211 113556678899999988766
No 419
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.20 E-value=9.4e-11 Score=132.74 Aligned_cols=82 Identities=23% Similarity=0.266 Sum_probs=71.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCC--------------------------------------CEEEEEeCCHHHHHHH
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLP--------------------------------------SKVYGLDINPRAIRIS 70 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~--------------------------------------~~V~giDis~~al~~A 70 (903)
.++..|||++||||.+++.+|....+ .+|+|+|+|+.|++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 35789999999999999998886543 4699999999999999
Q ss_pred HHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCC
Q 043334 71 WINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQIL 127 (903)
Q Consensus 71 ~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~ 127 (903)
++|+..+|++ +++++.++|+.+..... +||+|++||||..
T Consensus 280 r~Na~~~gl~---------------~~I~~~~~D~~~~~~~~--~fD~Iv~NPPYg~ 319 (393)
T 3k0b_A 280 KQNAVEAGLG---------------DLITFRQLQVADFQTED--EYGVVVANPPYGE 319 (393)
T ss_dssp HHHHHHTTCT---------------TCSEEEECCGGGCCCCC--CSCEEEECCCCCC
T ss_pred HHHHHHcCCC---------------CceEEEECChHhCCCCC--CCCEEEECCCCcc
Confidence 9999999873 57999999999986543 8999999999974
No 420
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.20 E-value=1.6e-11 Score=142.68 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=84.6
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.+++.+++ .+..+|+|+|+|+ +++.|+++++.+++ .++++++++|+.+.
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~gl---------------~~~v~~~~~d~~~~ 219 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNNL---------------TDRIVVIPGKVEEV 219 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHTTC---------------TTTEEEEESCTTTC
T ss_pred cCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHcCC---------------CCcEEEEECchhhC
Confidence 3578999999999999999887 4567999999998 99999999998887 36899999999886
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
..+ ++||+|++|++...... +.....+.++.++|||||.+++
T Consensus 220 ~~~--~~fD~Ivs~~~~~~~~~------------------------------------e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 220 SLP--EQVDIIISEPMGYMLFN------------------------------------ERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCS--SCEEEEECCCCHHHHTC------------------------------------HHHHHHHHHGGGGEEEEEEEES
T ss_pred ccC--CCeEEEEEeCchHhcCc------------------------------------HHHHHHHHHHHHhcCCCCEEEE
Confidence 433 38999999877321100 0012456788999999999986
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 262 ~~ 263 (480)
T 3b3j_A 262 TI 263 (480)
T ss_dssp CE
T ss_pred Ee
Confidence 44
No 421
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=5.7e-11 Score=122.53 Aligned_cols=104 Identities=19% Similarity=0.103 Sum_probs=83.9
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++++..+++ +++++.++|+..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~ 139 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY----------------DNVIVIVGDGTL 139 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC----------------TTEEEEESCGGG
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----------------CCeEEEECCccc
Confidence 367899999999999999999987 347999999999999999999987776 469999999866
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
.... .++||+|+++.+... +.+++.+.|||||+++
T Consensus 140 ~~~~-~~~fD~v~~~~~~~~--------------------------------------------~~~~~~~~L~pgG~lv 174 (215)
T 2yxe_A 140 GYEP-LAPYDRIYTTAAGPK--------------------------------------------IPEPLIRQLKDGGKLL 174 (215)
T ss_dssp CCGG-GCCEEEEEESSBBSS--------------------------------------------CCHHHHHTEEEEEEEE
T ss_pred CCCC-CCCeeEEEECCchHH--------------------------------------------HHHHHHHHcCCCcEEE
Confidence 5432 237999997644331 1236788999999999
Q ss_pred EEeCCC
Q 043334 188 FNMGGR 193 (903)
Q Consensus 188 ~~~~~~ 193 (903)
+.++..
T Consensus 175 ~~~~~~ 180 (215)
T 2yxe_A 175 MPVGRY 180 (215)
T ss_dssp EEESSS
T ss_pred EEECCC
Confidence 988764
No 422
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.19 E-value=6.5e-11 Score=131.05 Aligned_cols=106 Identities=18% Similarity=0.269 Sum_probs=84.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||+|.+++.+++. +..+|+|+|+| .|++.|++++..+++ .++++++++|+.+..
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~---------------~~~i~~~~~d~~~~~ 100 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGF---------------SDKITLLRGKLEDVH 100 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTC---------------TTTEEEEESCTTTSC
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCC---------------CCCEEEEECchhhcc
Confidence 5689999999999999998886 45699999999 599999999988887 357999999998875
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.+. ++||+|+++++........ .+..++.++.++|||||.++.
T Consensus 101 ~~~-~~~D~Ivs~~~~~~l~~~~-----------------------------------~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 101 LPF-PKVDIIISEWMGYFLLYES-----------------------------------MMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CSS-SCEEEEEECCCBTTBSTTC-----------------------------------CHHHHHHHHHHHEEEEEEEES
T ss_pred CCC-CcccEEEEeCchhhcccHH-----------------------------------HHHHHHHHHHhhcCCCeEEEE
Confidence 442 3899999987643211100 022678888999999999974
No 423
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.19 E-value=4.2e-11 Score=134.29 Aligned_cols=107 Identities=20% Similarity=0.275 Sum_probs=83.2
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++|++|||+|||||.+++.+|+. ++.+|+|+|.|+ |++.|+++++.||++ ++|+++++|+.+
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~~~---------------~~i~~i~~~~~~ 143 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNGLE---------------DRVHVLPGPVET 143 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTTCT---------------TTEEEEESCTTT
T ss_pred hcCCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcCCC---------------ceEEEEeeeeee
Confidence 357899999999999999987765 466999999996 899999999999983 689999999998
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
...+. +||+||+++--.. +. +-..+..++....++|||||.++
T Consensus 144 ~~lpe--~~DvivsE~~~~~------l~-----------------------------~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 144 VELPE--QVDAIVSEWMGYG------LL-----------------------------HESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CCCSS--CEEEEECCCCBTT------BT-----------------------------TTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ecCCc--cccEEEeeccccc------cc-----------------------------ccchhhhHHHHHHhhCCCCceEC
Confidence 86553 8999997532111 00 00013366777889999999987
Q ss_pred E
Q 043334 188 F 188 (903)
Q Consensus 188 ~ 188 (903)
.
T Consensus 187 P 187 (376)
T 4hc4_A 187 P 187 (376)
T ss_dssp S
T ss_pred C
Confidence 5
No 424
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.19 E-value=5.1e-11 Score=125.61 Aligned_cols=105 Identities=16% Similarity=0.161 Sum_probs=85.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++++|||+|||+|..++.+++..+ +.+|+++|+|+++++.|++|+...|+ .++++++++|..+.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---------------~~~i~~~~gda~~~ 134 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV---------------EHKINFIESDAMLA 134 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC---------------GGGEEEEESCHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CCcEEEEEcCHHHH
Confidence 467999999999999999999877 68999999999999999999988876 25799999999875
Q ss_pred ccCC------CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccC
Q 043334 109 CRDH------DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKP 182 (903)
Q Consensus 109 ~~~~------~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkp 182 (903)
.... .++||+|+.+.+. ..+..+++.+.++|+|
T Consensus 135 l~~l~~~~~~~~~fD~I~~d~~~-----------------------------------------~~~~~~l~~~~~~L~p 173 (237)
T 3c3y_A 135 LDNLLQGQESEGSYDFGFVDADK-----------------------------------------PNYIKYHERLMKLVKV 173 (237)
T ss_dssp HHHHHHSTTCTTCEEEEEECSCG-----------------------------------------GGHHHHHHHHHHHEEE
T ss_pred HHHHHhccCCCCCcCEEEECCch-----------------------------------------HHHHHHHHHHHHhcCC
Confidence 3211 2489999854210 0023678999999999
Q ss_pred CcEEEEEe
Q 043334 183 SGIMIFNM 190 (903)
Q Consensus 183 gG~ll~~~ 190 (903)
||.+++..
T Consensus 174 GG~lv~d~ 181 (237)
T 3c3y_A 174 GGIVAYDN 181 (237)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEec
Confidence 99999864
No 425
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.19 E-value=1.1e-10 Score=134.07 Aligned_cols=149 Identities=14% Similarity=0.079 Sum_probs=105.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..+..+++..++.+|+|+|+|+.+++.+++|+..+|+ +++++++|+.+..
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-----------------~~~~~~~D~~~~~ 308 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-----------------KATVKQGDGRYPS 308 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-----------------CCEEEECCTTCTH
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-----------------CeEEEeCchhhch
Confidence 57899999999999999999988778999999999999999999988876 4789999998764
Q ss_pred c-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 R-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ...++||+|++|||+.........+.......+++ ......+...+++.+.++|||||++++
T Consensus 309 ~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~----------------~~~l~~~q~~~L~~a~~~LkpGG~lvy 372 (429)
T 1sqg_A 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRD----------------IPELAQLQSEILDAIWPHLKTGGTLVY 372 (429)
T ss_dssp HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTH----------------HHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred hhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHH----------------HHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 2 11237999999999975332211111000000000 001123345889999999999999999
Q ss_pred EeCCC---CcHHHHHHHHHHC-CCeEE
Q 043334 189 NMGGR---PGQGVCKRLFERR-GFRVD 211 (903)
Q Consensus 189 ~~~~~---~~~~~l~~ll~~~-gf~~~ 211 (903)
.+.+. .....+...++++ +|...
T Consensus 373 stcs~~~~ene~~v~~~l~~~~~~~~~ 399 (429)
T 1sqg_A 373 ATCSVLPEENSLQIKAFLQRTADAELC 399 (429)
T ss_dssp EESCCCGGGTHHHHHHHHHHCTTCEEC
T ss_pred EECCCChhhHHHHHHHHHHhCCCCEEe
Confidence 76433 3455666777776 57653
No 426
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.19 E-value=9.6e-11 Score=119.92 Aligned_cols=122 Identities=19% Similarity=0.187 Sum_probs=88.1
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhh
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEK 91 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~ 91 (903)
.+...+++.+...+ ++.+|||+|||+|..+..++.. ++.+|+|+|+|+.|++.|++++..++
T Consensus 9 ~~~~~~~~~~~~~~----~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~------------- 70 (209)
T 2p8j_A 9 PQLYRFLKYCNESN----LDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENN------------- 70 (209)
T ss_dssp THHHHHHHHHHHSS----SCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHT-------------
T ss_pred hhHHHHHHHHhccC----CCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcC-------------
Confidence 34445555555443 4689999999999985544433 36799999999999999999986654
Q ss_pred cccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHH
Q 043334 92 KTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIAR 171 (903)
Q Consensus 92 ~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~ 171 (903)
.+++++++|+.+..... ++||+|+++-.... +. ......
T Consensus 71 ----~~~~~~~~d~~~~~~~~-~~fD~v~~~~~l~~------~~------------------------------~~~~~~ 109 (209)
T 2p8j_A 71 ----FKLNISKGDIRKLPFKD-ESMSFVYSYGTIFH------MR------------------------------KNDVKE 109 (209)
T ss_dssp ----CCCCEEECCTTSCCSCT-TCEEEEEECSCGGG------SC------------------------------HHHHHH
T ss_pred ----CceEEEECchhhCCCCC-CceeEEEEcChHHh------CC------------------------------HHHHHH
Confidence 36889999998865433 38999997532221 10 012347
Q ss_pred HHHHHhhcccCCcEEEEEeCC
Q 043334 172 AVEEGIGVIKPSGIMIFNMGG 192 (903)
Q Consensus 172 ~l~~~~~~LkpgG~ll~~~~~ 192 (903)
+++++.++|||||.+++....
T Consensus 110 ~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 110 AIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp HHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEec
Confidence 899999999999999996543
No 427
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.19 E-value=2.6e-11 Score=129.45 Aligned_cols=122 Identities=14% Similarity=0.186 Sum_probs=91.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++ ++.+|+|+|+|+.|++.|+++. +++++++|+.+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~----------------------~~~~~~~d~~~~~ 89 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP----------------------QVEWFTGYAENLA 89 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT----------------------TEEEECCCTTSCC
T ss_pred CCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc----------------------CCEEEECchhhCC
Confidence 578999999999999999997 4789999999999999876442 6999999998865
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++-.....++ ...+++++.++|| ||.+++.
T Consensus 90 ~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 90 LPD-KSVDGVISILAIHHFSH--------------------------------------LEKSFQEMQRIIR-DGTIVLL 129 (261)
T ss_dssp SCT-TCBSEEEEESCGGGCSS--------------------------------------HHHHHHHHHHHBC-SSCEEEE
T ss_pred CCC-CCEeEEEEcchHhhccC--------------------------------------HHHHHHHHHHHhC-CcEEEEE
Confidence 433 48999997533321110 2378999999999 9966663
Q ss_pred eCC-----------------------CCcHHHHHHHHHHCCCeEEEEEeh
Q 043334 190 MGG-----------------------RPGQGVCKRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~~-----------------------~~~~~~l~~ll~~~gf~~~~~~~~ 216 (903)
... ......+. +++++||..+.....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 130 TFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp EECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred EcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 221 11234456 899999988776433
No 428
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.18 E-value=9.3e-11 Score=122.01 Aligned_cols=109 Identities=19% Similarity=0.157 Sum_probs=84.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|..+..+++..+ ..+|+|+|+++.+++.|++|+..++.+.+ ..+++++.++|+..
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-----------~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL-----------SSGRVQLVVGDGRM 144 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH-----------HTSSEEEEESCGGG
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccc-----------CCCcEEEEECCccc
Confidence 4678999999999999999998863 36999999999999999999877542000 01479999999986
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
..... ++||+|+++.+.. .+++++.+.|||||+++
T Consensus 145 ~~~~~-~~fD~i~~~~~~~--------------------------------------------~~~~~~~~~LkpgG~lv 179 (226)
T 1i1n_A 145 GYAEE-APYDAIHVGAAAP--------------------------------------------VVPQALIDQLKPGGRLI 179 (226)
T ss_dssp CCGGG-CCEEEEEECSBBS--------------------------------------------SCCHHHHHTEEEEEEEE
T ss_pred CcccC-CCcCEEEECCchH--------------------------------------------HHHHHHHHhcCCCcEEE
Confidence 54332 3799999765542 12456789999999999
Q ss_pred EEeCCC
Q 043334 188 FNMGGR 193 (903)
Q Consensus 188 ~~~~~~ 193 (903)
+.++..
T Consensus 180 ~~~~~~ 185 (226)
T 1i1n_A 180 LPVGPA 185 (226)
T ss_dssp EEESCT
T ss_pred EEEecC
Confidence 987653
No 429
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.18 E-value=1.5e-10 Score=129.43 Aligned_cols=132 Identities=18% Similarity=0.206 Sum_probs=101.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+++.+++++|+ +.+++.|++++..+++ .++++++.+|+.+.
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~ 245 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL---------------SDRVDVVEGDFFEP 245 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC---------------TTTEEEEECCTTSC
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC---------------CCceEEEeCCCCCC
Confidence 3568999999999999999999988899999999 9999999999987776 35899999999874
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.+ . .||+|+++......+ ......+++++.++|||||++++
T Consensus 246 ~~-~--~~D~v~~~~vl~~~~------------------------------------~~~~~~~l~~~~~~L~pgG~l~i 286 (360)
T 1tw3_A 246 LP-R--KADAIILSFVLLNWP------------------------------------DHDAVRILTRCAEALEPGGRILI 286 (360)
T ss_dssp CS-S--CEEEEEEESCGGGSC------------------------------------HHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CC-C--CccEEEEcccccCCC------------------------------------HHHHHHHHHHHHHhcCCCcEEEE
Confidence 32 2 599998643322110 11123789999999999999887
Q ss_pred EeCC-------------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGG-------------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~-------------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.... ....+.++++++++||+.++...
T Consensus 287 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 287 HERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp EECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 5322 12345667889999999887743
No 430
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.18 E-value=7e-11 Score=120.49 Aligned_cols=132 Identities=14% Similarity=0.171 Sum_probs=92.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.. .. ++++++++|+.+.
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~~----------------~~v~~~~~D~~~~ 74 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------EI----------------AGVRFIRCDIFKE 74 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------CC----------------TTCEEEECCTTSS
T ss_pred CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------cC----------------CCeEEEEccccCH
Confidence 46889999999999999999987 7899999999741 11 4799999999875
Q ss_pred ccC-------C---CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhh
Q 043334 109 CRD-------H---DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIG 178 (903)
Q Consensus 109 ~~~-------~---~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~ 178 (903)
... . .++||+|++|++....... .. . ......+...+++.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~--~~---d----------------------~~~~~~l~~~~l~~a~~ 127 (191)
T 3dou_A 75 TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIP--SR---D----------------------HAVSYQIGQRVMEIAVR 127 (191)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCH--HH---H----------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCcceEEecCCCcCCCCCc--cc---C----------------------HHHHHHHHHHHHHHHHH
Confidence 310 0 0289999999754322110 00 0 01122345688999999
Q ss_pred cccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEEehh
Q 043334 179 VIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 179 ~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
+|||||.|++.+........+...++. .|..+......
T Consensus 128 ~LkpGG~lv~k~~~~~~~~~~~~~l~~-~F~~v~~~kP~ 165 (191)
T 3dou_A 128 YLRNGGNVLLKQFQGDMTNDFIAIWRK-NFSSYKISKPP 165 (191)
T ss_dssp HEEEEEEEEEEEECSTHHHHHHHHHGG-GEEEEEEECC-
T ss_pred HccCCCEEEEEEcCCCCHHHHHHHHHH-hcCEEEEECCC
Confidence 999999999987766665555556644 58877765443
No 431
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.17 E-value=7.1e-11 Score=123.23 Aligned_cols=108 Identities=16% Similarity=0.165 Sum_probs=83.0
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCC------CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEE
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLP------SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHE 102 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~------~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~ 102 (903)
.++.+|||+|||+|.++..+++..+. .+|+|+|+++.+++.|++|+..++... -..+++++.+
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-----------~~~~~v~~~~ 151 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM-----------LDSGQLLIVE 151 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH-----------HHHTSEEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccc-----------cCCCceEEEE
Confidence 36789999999999999999987653 699999999999999999987665100 0014799999
Q ss_pred ccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccC
Q 043334 103 SDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKP 182 (903)
Q Consensus 103 gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkp 182 (903)
+|..+.... .++||+|+++.+.. .+.+++.+.|||
T Consensus 152 ~d~~~~~~~-~~~fD~I~~~~~~~--------------------------------------------~~~~~~~~~Lkp 186 (227)
T 1r18_A 152 GDGRKGYPP-NAPYNAIHVGAAAP--------------------------------------------DTPTELINQLAS 186 (227)
T ss_dssp SCGGGCCGG-GCSEEEEEECSCBS--------------------------------------------SCCHHHHHTEEE
T ss_pred CCcccCCCc-CCCccEEEECCchH--------------------------------------------HHHHHHHHHhcC
Confidence 999884433 23899999764432 123567889999
Q ss_pred CcEEEEEeCC
Q 043334 183 SGIMIFNMGG 192 (903)
Q Consensus 183 gG~ll~~~~~ 192 (903)
||++++.++.
T Consensus 187 gG~lvi~~~~ 196 (227)
T 1r18_A 187 GGRLIVPVGP 196 (227)
T ss_dssp EEEEEEEESC
T ss_pred CCEEEEEEec
Confidence 9999998875
No 432
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.17 E-value=6.7e-11 Score=130.23 Aligned_cols=103 Identities=17% Similarity=0.094 Sum_probs=84.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+|+++++.|++++..+++ +++++.++|+.+
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~----------------~~v~~~~~d~~~ 137 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI----------------ENVIFVCGDGYY 137 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC----------------CSEEEEESCGGG
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC----------------CCeEEEECChhh
Confidence 3678999999999999999999876 36899999999999999999988876 469999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
..... ++||+|+++++.... .+++.+.|||||+++
T Consensus 138 ~~~~~-~~fD~Iv~~~~~~~~--------------------------------------------~~~~~~~LkpgG~lv 172 (317)
T 1dl5_A 138 GVPEF-SPYDVIFVTVGVDEV--------------------------------------------PETWFTQLKEGGRVI 172 (317)
T ss_dssp CCGGG-CCEEEEEECSBBSCC--------------------------------------------CHHHHHHEEEEEEEE
T ss_pred ccccC-CCeEEEEEcCCHHHH--------------------------------------------HHHHHHhcCCCcEEE
Confidence 54432 389999987654311 134667899999999
Q ss_pred EEeCC
Q 043334 188 FNMGG 192 (903)
Q Consensus 188 ~~~~~ 192 (903)
+..+.
T Consensus 173 i~~~~ 177 (317)
T 1dl5_A 173 VPINL 177 (317)
T ss_dssp EEBCB
T ss_pred EEECC
Confidence 98754
No 433
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.17 E-value=7.3e-11 Score=123.89 Aligned_cols=104 Identities=20% Similarity=0.214 Sum_probs=82.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.|++|+..+++ .++++..+|+...
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~----------------~~v~~~~~d~~~~ 152 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGV----------------KNVHVILGDGSKG 152 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTC----------------CSEEEEESCGGGC
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCC----------------CCcEEEECCcccC
Confidence 3578999999999999999999876 8999999999999999999988776 4699999998443
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... ..+||+|+++.+... +.+++.+.|||||++++
T Consensus 153 ~~~-~~~fD~Ii~~~~~~~--------------------------------------------~~~~~~~~L~pgG~lvi 187 (235)
T 1jg1_A 153 FPP-KAPYDVIIVTAGAPK--------------------------------------------IPEPLIEQLKIGGKLII 187 (235)
T ss_dssp CGG-GCCEEEEEECSBBSS--------------------------------------------CCHHHHHTEEEEEEEEE
T ss_pred CCC-CCCccEEEECCcHHH--------------------------------------------HHHHHHHhcCCCcEEEE
Confidence 322 226999997643321 12356789999999999
Q ss_pred EeCCCC
Q 043334 189 NMGGRP 194 (903)
Q Consensus 189 ~~~~~~ 194 (903)
.++...
T Consensus 188 ~~~~~~ 193 (235)
T 1jg1_A 188 PVGSYH 193 (235)
T ss_dssp EECSSS
T ss_pred EEecCC
Confidence 887643
No 434
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.17 E-value=2.6e-10 Score=123.51 Aligned_cols=151 Identities=15% Similarity=0.095 Sum_probs=94.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccc--------------ccCCCCcchhhhcccC
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNAL--------------DEKGQPIYDAEKKTLL 95 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl--------------~~~~~~~~~~~~~~~~ 95 (903)
++.+|||+|||+|..+..++. .++.+|+|+|+|+.|++.|++++....- ................
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc-cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 678999999999995554443 3467999999999999999987643210 0000000000000000
Q ss_pred CcEEEEEccccc-cccC----CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHH
Q 043334 96 DRVEFHESDLLA-YCRD----HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIA 170 (903)
Q Consensus 96 ~~v~~~~gDl~~-~~~~----~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~ 170 (903)
..++++++|+.+ .+.. ..++||+|++|-... .+ ........
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~------~~----------------------------~~~~~~~~ 195 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLE------AV----------------------------SPDLASFQ 195 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHH------HH----------------------------CSSHHHHH
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhh------hh----------------------------cCCHHHHH
Confidence 126788889987 3211 123699999752111 00 00112245
Q ss_pred HHHHHHhhcccCCcEEEEEe---------------CCCCcHHHHHHHHHHCCCeEEEEEe
Q 043334 171 RAVEEGIGVIKPSGIMIFNM---------------GGRPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 171 ~~l~~~~~~LkpgG~ll~~~---------------~~~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.+++++.++|||||.+++.. ........+++++++.||.++....
T Consensus 196 ~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 255 (289)
T 2g72_A 196 RALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRT 255 (289)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeE
Confidence 88999999999999999841 1233567778999999999887753
No 435
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.16 E-value=1.3e-10 Score=129.73 Aligned_cols=107 Identities=21% Similarity=0.287 Sum_probs=85.0
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.|+++++.+++ .++++++++|+.+.
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l---------------~~~v~~~~~d~~~~ 111 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL---------------TDRIVVIPGKVEEV 111 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC---------------TTTEEEEESCTTTC
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCC---------------CCcEEEEEcchhhC
Confidence 36789999999999999998885 456999999996 89999999988887 35899999999887
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
..+ ++||+|+++++........ +...+.++.++|||||.+++
T Consensus 112 ~~~--~~~D~Ivs~~~~~~~~~~~------------------------------------~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 112 SLP--EQVDIIISEPMGYMLFNER------------------------------------MLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp CCS--SCEEEEEECCCBTTBTTTS------------------------------------HHHHHHHGGGGEEEEEEEES
T ss_pred CCC--CceeEEEEeCchhcCChHH------------------------------------HHHHHHHHHhhcCCCeEEEE
Confidence 544 3899999987754221100 11557788999999999986
Q ss_pred Ee
Q 043334 189 NM 190 (903)
Q Consensus 189 ~~ 190 (903)
..
T Consensus 154 ~~ 155 (348)
T 2y1w_A 154 TI 155 (348)
T ss_dssp CE
T ss_pred ec
Confidence 43
No 436
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.16 E-value=2.3e-10 Score=116.60 Aligned_cols=129 Identities=17% Similarity=0.119 Sum_probs=87.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWL--PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~--~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
.++.+|||+|||+|.++..+++..+ +.+|+|+|+++.+ .. ++++++++|+.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~----------------~~v~~~~~d~~ 73 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI----------------PNVYFIQGEIG 73 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC----------------TTCEEEECCTT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC----------------CCceEEEcccc
Confidence 3578999999999999999999887 5899999999831 11 36889999998
Q ss_pred ccc-------------------------cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhcccccccccccc
Q 043334 107 AYC-------------------------RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVE 161 (903)
Q Consensus 107 ~~~-------------------------~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~ 161 (903)
+.. .. ..+||+|++|++...... .....
T Consensus 74 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~fD~v~~~~~~~~~g~-~~~d~------------------------- 126 (201)
T 2plw_A 74 KDNMNNIKNINYIDNMNNNSVDYKLKEILQ-DKKIDIILSDAAVPCIGN-KIDDH------------------------- 126 (201)
T ss_dssp TTSSCCC-----------CHHHHHHHHHHT-TCCEEEEEECCCCCCCSC-HHHHH-------------------------
T ss_pred chhhhhhccccccccccchhhHHHHHhhcC-CCcccEEEeCCCcCCCCC-cccCH-------------------------
Confidence 764 12 237999998864332111 00000
Q ss_pred ccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 162 DQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 162 ~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
.........+++++.++|||||.+++.+........+...++. .|..+..
T Consensus 127 -~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~-~f~~v~~ 176 (201)
T 2plw_A 127 -LNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG-MFQLVHT 176 (201)
T ss_dssp -HHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT-TEEEEEE
T ss_pred -HHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH-HHheEEE
Confidence 0011223468999999999999999976554444444555554 4666555
No 437
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.16 E-value=2.1e-10 Score=124.54 Aligned_cols=132 Identities=10% Similarity=0.074 Sum_probs=87.3
Q ss_pred CCCeEEEeCCccCHHHHHH----HHHhCCCEE--EEEeCCHHHHHHHHHHHHhc-ccccCCCCcchhhhcccCCcEEEEE
Q 043334 30 KDKTVAELGCGNGWITIAI----AEKWLPSKV--YGLDINPRAIRISWINLYLN-ALDEKGQPIYDAEKKTLLDRVEFHE 102 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~l----a~~~~~~~V--~giDis~~al~~A~~n~~~~-gl~~~~~~~~~~~~~~~~~~v~~~~ 102 (903)
++.+|||+|||+|.++..+ +..+++.+| +|+|+|++|++.|++++... +++ ..++.+..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~--------------~v~~~~~~ 117 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE--------------NVKFAWHK 117 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT--------------TEEEEEEC
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC--------------cceEEEEe
Confidence 5679999999999876543 334456655 99999999999999987543 221 01345567
Q ss_pred cccccccc-----CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHh
Q 043334 103 SDLLAYCR-----DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGI 177 (903)
Q Consensus 103 gDl~~~~~-----~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~ 177 (903)
++..++.. ..+++||+|+++--....++ ...++++++
T Consensus 118 ~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d--------------------------------------~~~~l~~~~ 159 (292)
T 2aot_A 118 ETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKD--------------------------------------IPATLKFFH 159 (292)
T ss_dssp SCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHH
T ss_pred cchhhhhhhhccccCCCceeEEEEeeeeeecCC--------------------------------------HHHHHHHHH
Confidence 77765431 12348999986422221111 237899999
Q ss_pred hcccCCcEEEEEeCCC-----------------------CcHHHHHHHHHHCCCeEEEE
Q 043334 178 GVIKPSGIMIFNMGGR-----------------------PGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 178 ~~LkpgG~ll~~~~~~-----------------------~~~~~l~~ll~~~gf~~~~~ 213 (903)
++|||||.+++..... .....+.+++++.||+....
T Consensus 160 r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 160 SLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp HTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHHTCCEEEE
T ss_pred HHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHCCCceEEE
Confidence 9999999999843211 23445567788888876553
No 438
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.16 E-value=1.3e-10 Score=127.95 Aligned_cols=140 Identities=16% Similarity=0.184 Sum_probs=96.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh--cc-cccCCCCcchhhhcccCCcEEEEEcccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYL--NA-LDEKGQPIYDAEKKTLLDRVEFHESDLL 106 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~--~g-l~~~~~~~~~~~~~~~~~~v~~~~gDl~ 106 (903)
.+++|||+|||+|.++..+++..+..+|+++|+|+.+++.|++++.. .+ ++ .++++++.+|+.
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~--------------~~~v~~~~~D~~ 142 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD--------------DPRAVLVIDDAR 142 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG--------------CTTEEEEESCHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccccc--------------CCceEEEEchHH
Confidence 46899999999999999999876778999999999999999998753 11 10 258999999998
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
+......++||+|+++++...... . .... + ....+++.+.++|||||++
T Consensus 143 ~~l~~~~~~fD~Ii~d~~~~~~~~-~-~~~~------------------l-----------~~~~~l~~~~~~LkpgG~l 191 (314)
T 1uir_A 143 AYLERTEERYDVVIIDLTDPVGED-N-PARL------------------L-----------YTVEFYRLVKAHLNPGGVM 191 (314)
T ss_dssp HHHHHCCCCEEEEEEECCCCBSTT-C-GGGG------------------G-----------SSHHHHHHHHHTEEEEEEE
T ss_pred HHHHhcCCCccEEEECCCCccccc-C-cchh------------------c-----------cHHHHHHHHHHhcCCCcEE
Confidence 864323348999999866532000 0 0000 0 0127899999999999999
Q ss_pred EEEeCCCC-----cHHHHHHHHHHCCCeEEEEEe
Q 043334 187 IFNMGGRP-----GQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 187 l~~~~~~~-----~~~~l~~ll~~~gf~~~~~~~ 215 (903)
++..+... ....+.+.+++. |..+..+.
T Consensus 192 v~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~ 224 (314)
T 1uir_A 192 GMQTGMILLTHHRVHPVVHRTVREA-FRYVRSYK 224 (314)
T ss_dssp EEEEEEECC---CHHHHHHHHHHTT-CSEEEEEE
T ss_pred EEEccCccccCHHHHHHHHHHHHHH-CCceEEEE
Confidence 99754321 122333445444 66655543
No 439
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.16 E-value=1.7e-10 Score=127.86 Aligned_cols=122 Identities=12% Similarity=0.101 Sum_probs=88.7
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-------cccCCCCcchhhhcccCCcEEE
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNA-------LDEKGQPIYDAEKKTLLDRVEF 100 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~g-------l~~~~~~~~~~~~~~~~~~v~~ 100 (903)
.++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++|+...+ ++ ...+++++
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~------------~~~~~v~~ 171 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE------------EWPDNVDF 171 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS------------CCCCCEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc------------ccCCceEE
Confidence 467899999999999999999985 44899999999999999999987532 20 01257999
Q ss_pred EEccccccccC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhc
Q 043334 101 HESDLLAYCRD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGV 179 (903)
Q Consensus 101 ~~gDl~~~~~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~ 179 (903)
+++|+.+.... ..++||+|++|+|... .+++++.++
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~~~~~~~-------------------------------------------~~l~~~~~~ 208 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVALDMLNPH-------------------------------------------VTLPVFYPH 208 (336)
T ss_dssp EESCTTCCC-------EEEEEECSSSTT-------------------------------------------TTHHHHGGG
T ss_pred EECChHHcccccCCCCeeEEEECCCCHH-------------------------------------------HHHHHHHHh
Confidence 99999886321 2237999998754210 247889999
Q ss_pred ccCCcEEEEEeCCCCcHHHHHHHHHH
Q 043334 180 IKPSGIMIFNMGGRPGQGVCKRLFER 205 (903)
Q Consensus 180 LkpgG~ll~~~~~~~~~~~l~~ll~~ 205 (903)
|+|||.+++..+.......+.+.+++
T Consensus 209 LkpgG~lv~~~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 209 LKHGGVCAVYVVNITQVIELLDGIRT 234 (336)
T ss_dssp EEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 99999999887754333333344444
No 440
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.15 E-value=1.1e-10 Score=126.65 Aligned_cols=140 Identities=15% Similarity=0.105 Sum_probs=97.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++++|||+|||+|..+..+++..+..+|+++|+|+.+++.|++++...+. .-..++++++.+|+.+..
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~------------~~~~~~v~~~~~D~~~~l 145 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC------------GYEDKRVNVFIEDASKFL 145 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSG------------GGGSTTEEEEESCHHHHH
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcc------------ccCCCcEEEEECChHHHH
Confidence 56899999999999999999876678999999999999999998754321 000258999999998865
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
....++||+|+++++....+. . .. . -..+++.+.++|+|||++++.
T Consensus 146 ~~~~~~fD~Ii~d~~~~~~~~----~-~l------------------~-----------~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 146 ENVTNTYDVIIVDSSDPIGPA----E-TL------------------F-----------NQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp HHCCSCEEEEEEECCCTTTGG----G-GG------------------S-----------SHHHHHHHHHHEEEEEEEEEE
T ss_pred HhCCCCceEEEEcCCCCCCcc----h-hh------------------h-----------HHHHHHHHHHhcCCCcEEEEE
Confidence 332348999998765332110 0 00 0 027899999999999999998
Q ss_pred eCCC-CcHHHH---HHHHHHCCCeEEEEEeh
Q 043334 190 MGGR-PGQGVC---KRLFERRGFRVDKLWQT 216 (903)
Q Consensus 190 ~~~~-~~~~~l---~~ll~~~gf~~~~~~~~ 216 (903)
.+.. ...... .+.+++. |..+..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~ 221 (283)
T 2i7c_A 192 CESLWIHVGTIKNMIGYAKKL-FKKVEYANI 221 (283)
T ss_dssp CCCTTTCHHHHHHHHHHHHTT-CSEEEEEEE
T ss_pred CCCcccCHHHHHHHHHHHHHH-CCceEEEEE
Confidence 7643 222222 2334333 776665443
No 441
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.15 E-value=1.2e-10 Score=114.96 Aligned_cols=130 Identities=17% Similarity=0.181 Sum_probs=93.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++.+ ++.+++|+|+++ +++. .++++.++|+.+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------------------~~~~~~~~d~~~ 73 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------------------VGVDFLQGDFRD 73 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------------------TTEEEEESCTTS
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------------------CcEEEEEccccc
Confidence 367899999999999999999986 458999999999 6532 268999999987
Q ss_pred cc--------cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhc
Q 043334 108 YC--------RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGV 179 (903)
Q Consensus 108 ~~--------~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~ 179 (903)
.. ... ++||+|++|+|+........ ... ........+++++.++
T Consensus 74 ~~~~~~~~~~~~~-~~~D~i~~~~~~~~~~~~~~-~~~--------------------------~~~~~~~~~l~~~~~~ 125 (180)
T 1ej0_A 74 ELVMKALLERVGD-SKVQVVMSDMAPNMSGTPAV-DIP--------------------------RAMYLVELALEMCRDV 125 (180)
T ss_dssp HHHHHHHHHHHTT-CCEEEEEECCCCCCCSCHHH-HHH--------------------------HHHHHHHHHHHHHHHH
T ss_pred chhhhhhhccCCC-CceeEEEECCCccccCCCcc-chH--------------------------HHHHHHHHHHHHHHHH
Confidence 64 222 38999999998764432110 000 0011234889999999
Q ss_pred ccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 180 IKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 180 LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
|+|||.+++..........+.+.+++. |..+...
T Consensus 126 L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (180)
T 1ej0_A 126 LAPGGSFVVKVFQGEGFDEYLREIRSL-FTKVKVR 159 (180)
T ss_dssp EEEEEEEEEEEESSTTHHHHHHHHHHH-EEEEEEE
T ss_pred cCCCcEEEEEEecCCcHHHHHHHHHHh-hhhEEee
Confidence 999999999766655555555666664 7766654
No 442
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=6.9e-11 Score=124.48 Aligned_cols=114 Identities=17% Similarity=0.108 Sum_probs=84.1
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++.. ..+++++++|+.+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~--~~v~gvD~s~~~~~~a~~~~~-------------------~~~~~~~~~d~~~ 112 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF--PRVIGLDVSKSALEIAAKENT-------------------AANISYRLLDGLV 112 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS--SCEEEEESCHHHHHHHHHHSC-------------------CTTEEEEECCTTC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC--CCEEEEECCHHHHHHHHHhCc-------------------ccCceEEECcccc
Confidence 3467899999999999999999985 399999999999999998761 1379999999988
Q ss_pred cccCC----CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 108 YCRDH----DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 108 ~~~~~----~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
+.... ...||+|+++......+. +....+++++.++||||
T Consensus 113 ~~~~~~~~~~~~~d~v~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~Lkpg 156 (245)
T 3ggd_A 113 PEQAAQIHSEIGDANIYMRTGFHHIPV------------------------------------EKRELLGQSLRILLGKQ 156 (245)
T ss_dssp HHHHHHHHHHHCSCEEEEESSSTTSCG------------------------------------GGHHHHHHHHHHHHTTT
T ss_pred cccccccccccCccEEEEcchhhcCCH------------------------------------HHHHHHHHHHHHHcCCC
Confidence 64321 114899997644432211 01237899999999999
Q ss_pred cEEEEEeCCCCcHHH
Q 043334 184 GIMIFNMGGRPGQGV 198 (903)
Q Consensus 184 G~ll~~~~~~~~~~~ 198 (903)
|.+++..........
T Consensus 157 G~l~i~~~~~~~~~~ 171 (245)
T 3ggd_A 157 GAMYLIELGTGCIDF 171 (245)
T ss_dssp CEEEEEEECTTHHHH
T ss_pred CEEEEEeCCccccHH
Confidence 997775544433333
No 443
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.15 E-value=1.6e-10 Score=119.55 Aligned_cols=122 Identities=19% Similarity=0.193 Sum_probs=91.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. .++.++|+.+..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~-----------------------~~~~~~d~~~~~ 86 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKL-----------------------DHVVLGDIETMD 86 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTS-----------------------SEEEESCTTTCC
T ss_pred CCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-----------------------CcEEEcchhhcC
Confidence 6789999999999999999987 489999999999999998653 367889987632
Q ss_pred c-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 110 R-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 110 ~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. ...++||+|+++-.....++ ...+++++.++|+|||.+++
T Consensus 87 ~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 87 MPYEEEQFDCVIFGDVLEHLFD--------------------------------------PWAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp CCSCTTCEEEEEEESCGGGSSC--------------------------------------HHHHHHHTGGGEEEEEEEEE
T ss_pred CCCCCCccCEEEECChhhhcCC--------------------------------------HHHHHHHHHHHcCCCCEEEE
Confidence 1 12348999997522221110 12789999999999999999
Q ss_pred EeCCC-----------------------------CcHHHHHHHHHHCCCeEEEEE
Q 043334 189 NMGGR-----------------------------PGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 189 ~~~~~-----------------------------~~~~~l~~ll~~~gf~~~~~~ 214 (903)
..+.. .....+.+++++.||+++...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 183 (230)
T 3cc8_A 129 SIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVD 183 (230)
T ss_dssp EEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred EeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEE
Confidence 64321 245667788888898887764
No 444
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.14 E-value=2.8e-10 Score=125.78 Aligned_cols=128 Identities=16% Similarity=0.098 Sum_probs=99.8
Q ss_pred CeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccC
Q 043334 32 KTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRD 111 (903)
Q Consensus 32 ~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~ 111 (903)
.+|||+|||+|..+..+++.+|+.+++++|+ +.+++.|++++...++ .++++++.+|+.+.. +
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---------------~~~v~~~~~d~~~~~-~ 231 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA---------------GERVSLVGGDMLQEV-P 231 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH---------------TTSEEEEESCTTTCC-C
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC---------------CCcEEEecCCCCCCC-C
Confidence 8999999999999999999998899999999 9999999999876665 358999999998842 2
Q ss_pred CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeC
Q 043334 112 HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMG 191 (903)
Q Consensus 112 ~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~ 191 (903)
++||+|+++-..+. + ..+....+++++.+.|+|||++++...
T Consensus 232 --~~~D~v~~~~vl~~-------------~-----------------------~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 232 --SNGDIYLLSRIIGD-------------L-----------------------DEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp --SSCSEEEEESCGGG-------------C-----------------------CHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred --CCCCEEEEchhccC-------------C-----------------------CHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 37999986422211 0 111123789999999999999998532
Q ss_pred ------------------------CCCcHHHHHHHHHHCCCeEEEEE
Q 043334 192 ------------------------GRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 192 ------------------------~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.......+++++++.||+.++.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 274 TISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp CBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEE
Confidence 11245566788999999988774
No 445
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.14 E-value=9.5e-11 Score=131.95 Aligned_cols=103 Identities=17% Similarity=0.067 Sum_probs=86.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc---------------ccccCCCCcchhhhccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN---------------ALDEKGQPIYDAEKKTL 94 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~---------------gl~~~~~~~~~~~~~~~ 94 (903)
++.+|||+|||+|.+++.+++..++.+|+++|+|+++++.+++|++.| ++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--------------- 111 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--------------- 111 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS---------------
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC---------------
Confidence 468999999999999999999877789999999999999999999998 54
Q ss_pred CCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHH
Q 043334 95 LDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVE 174 (903)
Q Consensus 95 ~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~ 174 (903)
.+++++++|+.+.......+||+|+.|||+.. ..+++
T Consensus 112 -~~i~v~~~Da~~~~~~~~~~fD~I~lDP~~~~------------------------------------------~~~l~ 148 (378)
T 2dul_A 112 -KTIVINHDDANRLMAERHRYFHFIDLDPFGSP------------------------------------------MEFLD 148 (378)
T ss_dssp -SEEEEEESCHHHHHHHSTTCEEEEEECCSSCC------------------------------------------HHHHH
T ss_pred -CceEEEcCcHHHHHHhccCCCCEEEeCCCCCH------------------------------------------HHHHH
Confidence 34999999998875432337999998876531 05688
Q ss_pred HHhhcccCCcEEEEEe
Q 043334 175 EGIGVIKPSGIMIFNM 190 (903)
Q Consensus 175 ~~~~~LkpgG~ll~~~ 190 (903)
.+.+.||+||.+++..
T Consensus 149 ~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 149 TALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHhcCCCCEEEEEe
Confidence 8889999999888865
No 446
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.13 E-value=5.1e-10 Score=125.08 Aligned_cols=129 Identities=16% Similarity=0.215 Sum_probs=97.8
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
...+|+|+|||+|.+++.+++++|+.+++..|+ |.+++.|++++...+ .+|++++.+|+++.+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~----------------~~rv~~~~gD~~~~~ 241 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE----------------EEQIDFQEGDFFKDP 241 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------------------CCSEEEEESCTTTSC
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc----------------cCceeeecCccccCC
Confidence 457999999999999999999999999999998 889999998874333 369999999998764
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
.+ .+|+++.. ...+.+. .+...++++++++.|+|||++++.
T Consensus 242 ~~---~~D~~~~~-------------~vlh~~~-----------------------d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 242 LP---EADLYILA-------------RVLHDWA-----------------------DGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp CC---CCSEEEEE-------------SSGGGSC-----------------------HHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CC---CceEEEee-------------eecccCC-----------------------HHHHHHHHHHHHhhCCCCCEEEEE
Confidence 33 57998731 1122221 222347899999999999999883
Q ss_pred eC-------------------------CCCcHHHHHHHHHHCCCeEEEEE
Q 043334 190 MG-------------------------GRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 190 ~~-------------------------~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
.. .......++++++++||+.++++
T Consensus 283 e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~ 332 (353)
T 4a6d_A 283 ESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFK 332 (353)
T ss_dssp ECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEE
T ss_pred EeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 21 11234566889999999998884
No 447
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.12 E-value=1.2e-10 Score=122.62 Aligned_cols=105 Identities=14% Similarity=0.168 Sum_probs=84.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..+..+++.++ +.+|+++|+++.+++.|++++..++++ ++++++++|+.+.
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~---------------~~v~~~~~d~~~~ 124 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE---------------NKIFLKLGSALET 124 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG---------------GGEEEEESCHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---------------CCEEEEECCHHHH
Confidence 467999999999999999999876 679999999999999999999887762 4699999998764
Q ss_pred ccCC---------------C-CceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHH
Q 043334 109 CRDH---------------D-IQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARA 172 (903)
Q Consensus 109 ~~~~---------------~-~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~ 172 (903)
.... . ++||+|+++.. . . .+..+
T Consensus 125 ~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~------~--------~---------------------------~~~~~ 163 (239)
T 2hnk_A 125 LQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD------K--------E---------------------------NYPNY 163 (239)
T ss_dssp HHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC------G--------G---------------------------GHHHH
T ss_pred HHHHHhhcccccccccccCCCCCcCEEEEeCC------H--------H---------------------------HHHHH
Confidence 3210 1 38999996521 0 0 02267
Q ss_pred HHHHhhcccCCcEEEEEe
Q 043334 173 VEEGIGVIKPSGIMIFNM 190 (903)
Q Consensus 173 l~~~~~~LkpgG~ll~~~ 190 (903)
++++.+.|+|||++++..
T Consensus 164 l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 164 YPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHcCCCeEEEEEc
Confidence 899999999999999965
No 448
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.12 E-value=1.7e-10 Score=121.15 Aligned_cols=105 Identities=18% Similarity=0.258 Sum_probs=84.0
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++++|||+|||+|..++.+++..+ +.+|+++|+|+++++.|++++..++++ ++++++++|+.+.
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~---------------~~i~~~~~d~~~~ 136 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA---------------EKISLRLGPALAT 136 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG---------------GGEEEEESCHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---------------CcEEEEEcCHHHH
Confidence 457999999999999999999876 679999999999999999999887762 5799999998664
Q ss_pred ccC---CC--CceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 109 CRD---HD--IQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 109 ~~~---~~--~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
... .+ ++||+|+++.+. . .+..+++++.++|+||
T Consensus 137 l~~l~~~~~~~~fD~V~~d~~~------~-----------------------------------~~~~~l~~~~~~Lkpg 175 (232)
T 3cbg_A 137 LEQLTQGKPLPEFDLIFIDADK------R-----------------------------------NYPRYYEIGLNLLRRG 175 (232)
T ss_dssp HHHHHTSSSCCCEEEEEECSCG------G-----------------------------------GHHHHHHHHHHTEEEE
T ss_pred HHHHHhcCCCCCcCEEEECCCH------H-----------------------------------HHHHHHHHHHHHcCCC
Confidence 221 11 489999965320 0 0236799999999999
Q ss_pred cEEEEEe
Q 043334 184 GIMIFNM 190 (903)
Q Consensus 184 G~ll~~~ 190 (903)
|.+++..
T Consensus 176 G~lv~~~ 182 (232)
T 3cbg_A 176 GLMVIDN 182 (232)
T ss_dssp EEEEEEC
T ss_pred eEEEEeC
Confidence 9999954
No 449
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.11 E-value=9.2e-11 Score=126.27 Aligned_cols=128 Identities=19% Similarity=0.219 Sum_probs=83.2
Q ss_pred CCCeEEEeCCccCH----HHHHHHHHhC----CCEEEEEeCCHHHHHHHHHHHHhcc-cccCCCCc---c----hh--h-
Q 043334 30 KDKTVAELGCGNGW----ITIAIAEKWL----PSKVYGLDINPRAIRISWINLYLNA-LDEKGQPI---Y----DA--E- 90 (903)
Q Consensus 30 ~~~~VLDlGCGtG~----lsi~la~~~~----~~~V~giDis~~al~~A~~n~~~~g-l~~~~~~~---~----~~--~- 90 (903)
++.+|+|+|||||. +++.+++..+ +.+|+|+|+|++|++.|++++.... +...+..+ + .. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 6777777755 4699999999999999998753110 00000000 0 00 0
Q ss_pred ----hcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccH
Q 043334 91 ----KKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGL 166 (903)
Q Consensus 91 ----~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~ 166 (903)
...+..++.|.++|+.+.+.+..++||+|+|.- ...++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crn------vliyf~~------------------------------ 228 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRN------VMIYFDK------------------------------ 228 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECS------SGGGSCH------------------------------
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECC------chHhCCH------------------------------
Confidence 001124799999999885322124899999731 1112211
Q ss_pred HHHHHHHHHHhhcccCCcEEEEEeCCC
Q 043334 167 GLIARAVEEGIGVIKPSGIMIFNMGGR 193 (903)
Q Consensus 167 ~~~~~~l~~~~~~LkpgG~ll~~~~~~ 193 (903)
+...++++++++.|+|||.+++.++..
T Consensus 229 ~~~~~vl~~~~~~L~pgG~L~lg~sE~ 255 (274)
T 1af7_A 229 TTQEDILRRFVPLLKPDGLLFAGHSEN 255 (274)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEeccc
Confidence 223488999999999999999866544
No 450
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.10 E-value=3.2e-10 Score=129.24 Aligned_cols=108 Identities=19% Similarity=0.122 Sum_probs=81.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHH-------HHHHHhcccccCCCCcchhhhcccCCcEEEE
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRIS-------WINLYLNALDEKGQPIYDAEKKTLLDRVEFH 101 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A-------~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~ 101 (903)
.++.+|||+|||+|.+++.+|+..+..+|+|+|+++.+++.| ++|+...|++ ..+++++
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~--------------~~nV~~i 306 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR--------------LNNVEFS 306 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC--------------CCCEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC--------------CCceEEE
Confidence 367899999999999999999988777999999999999999 8888777731 1489999
Q ss_pred Ecccccc--cc-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhh
Q 043334 102 ESDLLAY--CR-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIG 178 (903)
Q Consensus 102 ~gDl~~~--~~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~ 178 (903)
++|.... .. ...++||+|++|.... . . .....++++.+
T Consensus 307 ~gD~~~~~~~~~~~~~~FDvIvvn~~l~-~-------~-------------------------------d~~~~L~el~r 347 (433)
T 1u2z_A 307 LKKSFVDNNRVAELIPQCDVILVNNFLF-D-------E-------------------------------DLNKKVEKILQ 347 (433)
T ss_dssp ESSCSTTCHHHHHHGGGCSEEEECCTTC-C-------H-------------------------------HHHHHHHHHHT
T ss_pred EcCccccccccccccCCCCEEEEeCccc-c-------c-------------------------------cHHHHHHHHHH
Confidence 9864421 10 0113899999763221 0 0 02256889999
Q ss_pred cccCCcEEEEE
Q 043334 179 VIKPSGIMIFN 189 (903)
Q Consensus 179 ~LkpgG~ll~~ 189 (903)
.|||||.+++.
T Consensus 348 ~LKpGG~lVi~ 358 (433)
T 1u2z_A 348 TAKVGCKIISL 358 (433)
T ss_dssp TCCTTCEEEES
T ss_pred hCCCCeEEEEe
Confidence 99999999985
No 451
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.10 E-value=9e-10 Score=125.64 Aligned_cols=125 Identities=16% Similarity=0.240 Sum_probs=88.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEE-EEEccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVE-FHESDLLA 107 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~-~~~gDl~~ 107 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++ +++ .... +...+...
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~----~~~---------------~~~~~~~~~~~~~ 164 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK----GIR---------------VRTDFFEKATADD 164 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT----TCC---------------EECSCCSHHHHHH
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc----CCC---------------cceeeechhhHhh
Confidence 35789999999999999999986 67999999999999999865 221 0111 22333333
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
+... +++||+|+++-.....+ ....+++++.++|||||+++
T Consensus 165 l~~~-~~~fD~I~~~~vl~h~~--------------------------------------d~~~~l~~~~r~LkpgG~l~ 205 (416)
T 4e2x_A 165 VRRT-EGPANVIYAANTLCHIP--------------------------------------YVQSVLEGVDALLAPDGVFV 205 (416)
T ss_dssp HHHH-HCCEEEEEEESCGGGCT--------------------------------------THHHHHHHHHHHEEEEEEEE
T ss_pred cccC-CCCEEEEEECChHHhcC--------------------------------------CHHHHHHHHHHHcCCCeEEE
Confidence 3322 23899999752222111 13378999999999999999
Q ss_pred EEeCC-------------------CCcHHHHHHHHHHCCCeEEEE
Q 043334 188 FNMGG-------------------RPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 188 ~~~~~-------------------~~~~~~l~~ll~~~gf~~~~~ 213 (903)
+..+. ......+++++++.||+++..
T Consensus 206 i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 206 FEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp EEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred EEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 96532 124456788899999988776
No 452
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.10 E-value=2.3e-10 Score=119.26 Aligned_cols=100 Identities=24% Similarity=0.264 Sum_probs=79.3
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++...++ +++++++|+.+.
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~------------------~v~~~~~d~~~~ 128 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYN------------------NIKLILGDGTLG 128 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCS------------------SEEEEESCGGGC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcC------------------CeEEEECCcccc
Confidence 35789999999999999999987 3799999999999999999884332 699999999874
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
... .++||+|+++.+... +.+++.++|||||++++
T Consensus 129 ~~~-~~~fD~v~~~~~~~~--------------------------------------------~~~~~~~~L~pgG~l~~ 163 (231)
T 1vbf_A 129 YEE-EKPYDRVVVWATAPT--------------------------------------------LLCKPYEQLKEGGIMIL 163 (231)
T ss_dssp CGG-GCCEEEEEESSBBSS--------------------------------------------CCHHHHHTEEEEEEEEE
T ss_pred ccc-CCCccEEEECCcHHH--------------------------------------------HHHHHHHHcCCCcEEEE
Confidence 332 238999997644321 12357789999999999
Q ss_pred EeCCC
Q 043334 189 NMGGR 193 (903)
Q Consensus 189 ~~~~~ 193 (903)
..+..
T Consensus 164 ~~~~~ 168 (231)
T 1vbf_A 164 PIGVG 168 (231)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 87654
No 453
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.10 E-value=2.1e-10 Score=125.47 Aligned_cols=117 Identities=10% Similarity=-0.073 Sum_probs=77.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccc----
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDL---- 105 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl---- 105 (903)
++.+|||+|||+|..+..++.. ++.+|+|+|+|+.||+.|+++....+... ..-..++++.++|+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~----------~~~~~~~~f~~~d~~~d~ 116 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGI----------KTKYYKFDYIQETIRSDT 116 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC--------------CCCEEEEEECCTTSSS
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccc----------cccccccchhhhhcccch
Confidence 5789999999999866665554 35799999999999999999876543200 00001367888887
Q ss_pred --ccccc-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccC
Q 043334 106 --LAYCR-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKP 182 (903)
Q Consensus 106 --~~~~~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkp 182 (903)
.++.. ...++||+|+|.--.+ ++.. . . ....+++++.++|||
T Consensus 117 ~~~~l~~~~~~~~FD~V~~~~~lh------y~~~-------------------------~-~---~~~~~l~~~~r~Lkp 161 (302)
T 2vdw_A 117 FVSSVREVFYFGKFNIIDWQFAIH------YSFH-------------------------P-R---HYATVMNNLSELTAS 161 (302)
T ss_dssp HHHHHHTTCCSSCEEEEEEESCGG------GTCS-------------------------T-T---THHHHHHHHHHHEEE
T ss_pred hhhhhhccccCCCeeEEEECchHH------HhCC-------------------------H-H---HHHHHHHHHHHHcCC
Confidence 32211 1234899998642111 1000 0 0 023789999999999
Q ss_pred CcEEEEEeCC
Q 043334 183 SGIMIFNMGG 192 (903)
Q Consensus 183 gG~ll~~~~~ 192 (903)
||.+++.+..
T Consensus 162 GG~~i~~~~~ 171 (302)
T 2vdw_A 162 GGKVLITTMD 171 (302)
T ss_dssp EEEEEEEEEC
T ss_pred CCEEEEEeCC
Confidence 9999987654
No 454
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.10 E-value=4.4e-10 Score=120.03 Aligned_cols=108 Identities=12% Similarity=0.034 Sum_probs=75.0
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.+++.+++. +.+|+|+|+|+.|++.|++|+..+.. +..+...+....
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v-----------------~~~~~~~~~~~~ 104 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCV-----------------TIDLLDITAEIP 104 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCC-----------------EEEECCTTSCCC
T ss_pred CCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccc-----------------eeeeeecccccc
Confidence 35789999999999999999987 68999999999999999998743311 233332222000
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
....++||+|++|....... .+....+++++.++| |||++++
T Consensus 105 -~~~~~~fD~Vv~~~~l~~~~------------------------------------~~~~~~~l~~l~~lL-PGG~l~l 146 (261)
T 3iv6_A 105 -KELAGHFDFVLNDRLINRFT------------------------------------TEEARRACLGMLSLV-GSGTVRA 146 (261)
T ss_dssp -GGGTTCCSEEEEESCGGGSC------------------------------------HHHHHHHHHHHHHHH-TTSEEEE
T ss_pred -cccCCCccEEEEhhhhHhCC------------------------------------HHHHHHHHHHHHHhC-cCcEEEE
Confidence 11123899999864433110 011336789999999 9999999
Q ss_pred EeCCC
Q 043334 189 NMGGR 193 (903)
Q Consensus 189 ~~~~~ 193 (903)
.+...
T Consensus 147 S~~~g 151 (261)
T 3iv6_A 147 SVKLG 151 (261)
T ss_dssp EEEBS
T ss_pred EeccC
Confidence 76543
No 455
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.09 E-value=2.7e-10 Score=116.96 Aligned_cols=100 Identities=12% Similarity=0.181 Sum_probs=78.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPS-KVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~-~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|.++..+ +. +|+|+|+|+.|++.|+++. .+++++++|+.+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~---------------------~~~~~~~~d~~~~ 89 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA---------------------PEATWVRAWGEAL 89 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC---------------------TTSEEECCCTTSC
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC---------------------CCcEEEEcccccC
Confidence 6789999999999998876 45 9999999999999999875 2688999999886
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
+... ++||+|+++-.....++ ...+++++.++|||||.+++
T Consensus 90 ~~~~-~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 90 PFPG-ESFDVVLLFTTLEFVED--------------------------------------VERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp CSCS-SCEEEEEEESCTTTCSC--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCC-CcEEEEEEcChhhhcCC--------------------------------------HHHHHHHHHHHcCCCCEEEE
Confidence 5433 48999997633322111 22789999999999999999
Q ss_pred EeCCCC
Q 043334 189 NMGGRP 194 (903)
Q Consensus 189 ~~~~~~ 194 (903)
......
T Consensus 131 ~~~~~~ 136 (211)
T 2gs9_A 131 GVLEAL 136 (211)
T ss_dssp EEECTT
T ss_pred EecCCc
Confidence 766544
No 456
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.09 E-value=9.9e-11 Score=123.43 Aligned_cols=120 Identities=13% Similarity=0.124 Sum_probs=86.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHH----hCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEK----WLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDL 105 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~----~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl 105 (903)
++.+|||+|||+|..+..+++. .++.+|+|+|+|+.|++.|+ ++ .++++++++|+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~---------------~~~v~~~~gD~ 139 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SD---------------MENITLHQGDC 139 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GG---------------CTTEEEEECCS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------cc---------------CCceEEEECcc
Confidence 3579999999999999999987 56789999999999998886 11 14799999999
Q ss_pred ccc---ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhh-ccc
Q 043334 106 LAY---CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIG-VIK 181 (903)
Q Consensus 106 ~~~---~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~-~Lk 181 (903)
.+. ......+||+|+++... . .+..+++++.+ +||
T Consensus 140 ~~~~~l~~~~~~~fD~I~~d~~~--------------~---------------------------~~~~~l~~~~r~~Lk 178 (236)
T 2bm8_A 140 SDLTTFEHLREMAHPLIFIDNAH--------------A---------------------------NTFNIMKWAVDHLLE 178 (236)
T ss_dssp SCSGGGGGGSSSCSSEEEEESSC--------------S---------------------------SHHHHHHHHHHHTCC
T ss_pred hhHHHHHhhccCCCCEEEECCch--------------H---------------------------hHHHHHHHHHHhhCC
Confidence 874 22222369999854220 0 02267889997 999
Q ss_pred CCcEEEEEeC----CCCcHHHHHHHHHHC--CCeEE
Q 043334 182 PSGIMIFNMG----GRPGQGVCKRLFERR--GFRVD 211 (903)
Q Consensus 182 pgG~ll~~~~----~~~~~~~l~~ll~~~--gf~~~ 211 (903)
|||++++... .......+.+++++. +|...
T Consensus 179 pGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 179 EGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp TTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred CCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 9999999532 112233556777776 46653
No 457
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.08 E-value=1.9e-09 Score=118.18 Aligned_cols=148 Identities=14% Similarity=0.135 Sum_probs=101.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
++.+|||+|||+|..++.+++..+ ..+|+|+|+++.+++.+++|++.+|+ .+++++++|+.+.
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~----------------~~v~~~~~D~~~~ 165 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV----------------SCCELAEEDFLAV 165 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC----------------CSEEEEECCGGGS
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC----------------CeEEEEeCChHhc
Confidence 578999999999999999999764 47999999999999999999998887 4799999999886
Q ss_pred ccCC--CCceeEEEECCCCCCCCCccchhhHHh---hhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCC
Q 043334 109 CRDH--DIQLERIVGCIPQILNPNPDAMSKIIT---ENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPS 183 (903)
Q Consensus 109 ~~~~--~~~fD~Iv~NpPy~~~~~~~~l~~~~~---~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkpg 183 (903)
.... ..+||.|+.|||+........-+ +.. .+.++. -..-..+...+++.+.++|+ |
T Consensus 166 ~~~~~~~~~fD~Vl~D~PcSg~G~~~r~p-d~~~~~~~~~~~----------------~~~l~~~Q~~iL~~a~~~l~-g 227 (309)
T 2b9e_A 166 SPSDPRYHEVHYILLDPSCSGSGMPSRQL-EEPGAGTPSPVR----------------LHALAGFQQRALCHALTFPS-L 227 (309)
T ss_dssp CTTCGGGTTEEEEEECCCCCC-------------------CC----------------HHHHHHHHHHHHHHHTTCTT-C
T ss_pred CccccccCCCCEEEEcCCcCCCCCCccCC-ChhhhccCCHHH----------------HHHHHHHHHHHHHHHHhccC-C
Confidence 5322 13799999999997543221100 000 000000 00012334578999999887 9
Q ss_pred cEEEEEeCC---CCcHHHHHHHHHHC-C-CeEE
Q 043334 184 GIMIFNMGG---RPGQGVCKRLFERR-G-FRVD 211 (903)
Q Consensus 184 G~ll~~~~~---~~~~~~l~~ll~~~-g-f~~~ 211 (903)
|++++.+.+ ......+...++++ + |+.+
T Consensus 228 G~lvYsTCs~~~~Ene~~v~~~l~~~~~~~~~~ 260 (309)
T 2b9e_A 228 QRLVYSTCSLCQEENEDVVRDALQQNPGAFRLA 260 (309)
T ss_dssp CEEEEEESCCCGGGTHHHHHHHHTTSTTTEEEC
T ss_pred CEEEEECCCCChHHhHHHHHHHHHhCCCcEEEe
Confidence 998886544 34555667777765 3 6554
No 458
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.07 E-value=5.1e-10 Score=115.94 Aligned_cols=119 Identities=19% Similarity=0.228 Sum_probs=90.4
Q ss_pred CCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCR 110 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~ 110 (903)
+.+|||+|||+|.++..+++. +|+|+|+.+++.++++ +++++++|+.+...
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------------------~~~~~~~d~~~~~~ 98 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------------------GVFVLKGTAENLPL 98 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------------------TCEEEECBTTBCCS
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------------------CCEEEEcccccCCC
Confidence 689999999999999887643 9999999999999865 36788999887653
Q ss_pred CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEe
Q 043334 111 DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNM 190 (903)
Q Consensus 111 ~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~ 190 (903)
. .++||+|+++-.....++ ...+++++.++|+|||.+++..
T Consensus 99 ~-~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 99 K-DESFDFALMVTTICFVDD--------------------------------------PERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp C-TTCEEEEEEESCGGGSSC--------------------------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-CCCeeEEEEcchHhhccC--------------------------------------HHHHHHHHHHHcCCCcEEEEEE
Confidence 3 348999997532221110 1268999999999999999953
Q ss_pred CCC-----------------------CcHHHHHHHHHHCCCeEEEEEehh
Q 043334 191 GGR-----------------------PGQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 191 ~~~-----------------------~~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
... .....+.+++++.||+++......
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 140 VDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp ECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred eCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEeccc
Confidence 221 255677889999999998876543
No 459
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.07 E-value=4.9e-10 Score=122.79 Aligned_cols=120 Identities=14% Similarity=0.062 Sum_probs=85.2
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++....+... ......+++++++|+.+..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~---------~~~~~~~~~~~~~D~~~~~ 103 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRR---------DSEYIFSAEFITADSSKEL 103 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSS---------CC-CCCEEEEEECCTTTSC
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcc---------cccccceEEEEEecccccc
Confidence 5679999999999999998874 57799999999999999999886542100 0001247999999998864
Q ss_pred ----cC-CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc
Q 043334 110 ----RD-HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG 184 (903)
Q Consensus 110 ----~~-~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG 184 (903)
.. ..++||+|+++-... ++. ........+++++.++|||||
T Consensus 104 ~~~~~~~~~~~fD~V~~~~~l~------~~~----------------------------~~~~~~~~~l~~~~~~LkpgG 149 (313)
T 3bgv_A 104 LIDKFRDPQMCFDICSCQFVCH------YSF----------------------------ESYEQADMMLRNACERLSPGG 149 (313)
T ss_dssp STTTCSSTTCCEEEEEEETCGG------GGG----------------------------GSHHHHHHHHHHHHTTEEEEE
T ss_pred hhhhcccCCCCEEEEEEecchh------hcc----------------------------CCHHHHHHHHHHHHHHhCCCc
Confidence 21 224899999753221 110 011223478999999999999
Q ss_pred EEEEEeCCC
Q 043334 185 IMIFNMGGR 193 (903)
Q Consensus 185 ~ll~~~~~~ 193 (903)
.+++.+...
T Consensus 150 ~li~~~~~~ 158 (313)
T 3bgv_A 150 YFIGTTPNS 158 (313)
T ss_dssp EEEEEEECH
T ss_pred EEEEecCCh
Confidence 999977653
No 460
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.06 E-value=1.3e-09 Score=132.10 Aligned_cols=132 Identities=16% Similarity=0.129 Sum_probs=96.6
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHh------------------------------------------CCCEEEEEeCCHHH
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKW------------------------------------------LPSKVYGLDINPRA 66 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~------------------------------------------~~~~V~giDis~~a 66 (903)
.++..|||++||||.+++.+|... +..+|+|+|+|+.|
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 357899999999999999988753 22589999999999
Q ss_pred HHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccccCCC-CceeEEEECCCCCCCCCccchhhHHhhhhhhh
Q 043334 67 IRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHD-IQLERIVGCIPQILNPNPDAMSKIITENASEE 145 (903)
Q Consensus 67 l~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~-~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~ 145 (903)
++.|++|+..+|++ +.+++.++|+.+...+.. ++||+||+||||-..-..
T Consensus 269 v~~A~~N~~~agv~---------------~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~-------------- 319 (703)
T 3v97_A 269 IQRARTNARLAGIG---------------ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDS-------------- 319 (703)
T ss_dssp HHHHHHHHHHTTCG---------------GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---C--------------
T ss_pred HHHHHHHHHHcCCC---------------CceEEEECChhhCccccccCCCCEEEeCCCccccccc--------------
Confidence 99999999999983 469999999998754332 279999999999632110
Q ss_pred hhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEE
Q 043334 146 FLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 146 ~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~ 213 (903)
...+..+++.+.+..+.+.|||.+++.++.. .+.+..|.+..+.
T Consensus 320 -----------------~~~l~~ly~~l~~~lk~~~~g~~~~ilt~~~-------~l~~~~glk~~k~ 363 (703)
T 3v97_A 320 -----------------EPALIALHSLLGRIMKNQFGGWNLSLFSASP-------DLLSCLQLRADKQ 363 (703)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHCTTCEEEEEESCH-------HHHHTTCCCEEEE
T ss_pred -----------------hhHHHHHHHHHHHHHHhhCCCCeEEEEeCCH-------HHHHHhCCCcccc
Confidence 0011112345666677777999999987752 3455667766544
No 461
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.05 E-value=9.3e-10 Score=111.43 Aligned_cols=131 Identities=12% Similarity=0.079 Sum_probs=87.5
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCC---------CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEE
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLP---------SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVE 99 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~---------~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~ 99 (903)
.++.+|||+|||+|.++..+++..+. .+|+|+|+|+.+ .+ .+++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~----------------~~~~ 73 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL----------------EGAT 73 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC----------------TTCE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC----------------CCCe
Confidence 46789999999999999999998765 799999999831 11 3688
Q ss_pred EE-Ecccccccc-------CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHH
Q 043334 100 FH-ESDLLAYCR-------DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIAR 171 (903)
Q Consensus 100 ~~-~gDl~~~~~-------~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~ 171 (903)
++ ++|+.+... ..+.+||+|++|++...... ..... .....+...
T Consensus 74 ~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~--~~~~~-------------------------~~~~~~~~~ 126 (196)
T 2nyu_A 74 FLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGF--RDLDH-------------------------DRLISLCLT 126 (196)
T ss_dssp EECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSC--HHHHH-------------------------HHHHHHHHH
T ss_pred EEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCC--cccCH-------------------------HHHHHHHHH
Confidence 88 899866421 11237999999864332111 00000 001123357
Q ss_pred HHHHHhhcccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 172 AVEEGIGVIKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 172 ~l~~~~~~LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
+++++.++|||||.+++..........+.+.+... |..+..+
T Consensus 127 ~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v~~~ 168 (196)
T 2nyu_A 127 LLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNVRII 168 (196)
T ss_dssp HHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHH-hcceEEE
Confidence 89999999999999999876555444444555553 6655553
No 462
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.05 E-value=2.3e-10 Score=124.04 Aligned_cols=78 Identities=21% Similarity=0.305 Sum_probs=67.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++++..++. .++++++++|+.+..
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~v~~~~~D~~~~~ 90 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPV---------------ASKLQVLVGDVLKTD 90 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTT---------------GGGEEEEESCTTTSC
T ss_pred CCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCC---------------CCceEEEEcceeccc
Confidence 5689999999999999999998 57999999999999999999865543 247999999998864
Q ss_pred cCCCCceeEEEECCCCCC
Q 043334 110 RDHDIQLERIVGCIPQIL 127 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~ 127 (903)
.+ .||+|++|+||..
T Consensus 91 ~~---~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 91 LP---FFDTCVANLPYQI 105 (285)
T ss_dssp CC---CCSEEEEECCGGG
T ss_pred ch---hhcEEEEecCccc
Confidence 33 7999999999984
No 463
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.04 E-value=1.5e-09 Score=117.04 Aligned_cols=108 Identities=12% Similarity=-0.005 Sum_probs=81.3
Q ss_pred CCeEEEeCCcc---CHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 31 DKTVAELGCGN---GWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 31 ~~~VLDlGCGt---G~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
..+|||+|||+ |.++..+.+..|+.+|+|+|+|+.|++.|++++... ++++++++|+.+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~------------------~~v~~~~~D~~~ 139 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD------------------PNTAVFTADVRD 139 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC------------------TTEEEEECCTTC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC------------------CCeEEEEeeCCC
Confidence 47999999999 998887777778899999999999999999987321 479999999976
Q ss_pred ccc----------CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHh
Q 043334 108 YCR----------DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGI 177 (903)
Q Consensus 108 ~~~----------~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~ 177 (903)
... ....+||+|+++--.+..++. ....+++++.
T Consensus 140 ~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~------------------------------------~~~~~l~~~~ 183 (274)
T 2qe6_A 140 PEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD------------------------------------VVDRVVGAYR 183 (274)
T ss_dssp HHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT------------------------------------THHHHHHHHH
T ss_pred chhhhccchhhccCCCCCCEEEEEechhhhCCcH------------------------------------HHHHHHHHHH
Confidence 420 111279999865322211110 0237899999
Q ss_pred hcccCCcEEEEEeCC
Q 043334 178 GVIKPSGIMIFNMGG 192 (903)
Q Consensus 178 ~~LkpgG~ll~~~~~ 192 (903)
++|+|||.+++....
T Consensus 184 ~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 184 DALAPGSYLFMTSLV 198 (274)
T ss_dssp HHSCTTCEEEEEEEB
T ss_pred HhCCCCcEEEEEEec
Confidence 999999999996544
No 464
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.03 E-value=8.5e-10 Score=131.83 Aligned_cols=134 Identities=13% Similarity=0.182 Sum_probs=91.9
Q ss_pred CCcccCc---chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccc
Q 043334 5 PSIFIPE---DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALD 80 (903)
Q Consensus 5 p~vfiP~---~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~ 80 (903)
.+.|.|. .|...+.+.+... ++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|++++......
T Consensus 698 ~gtFsPPL~eqRle~LLelL~~~-----~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnA 772 (950)
T 3htx_A 698 AAFFKPPLSKQRVEYALKHIRES-----SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNK 772 (950)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHHS-----CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTT
T ss_pred hCcCCchHHHHHHHHHHHHhccc-----CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccch
Confidence 4556664 2333344444433 46899999999999999999886 3479999999999999999877543110
Q ss_pred cCCCCcchhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccc
Q 043334 81 EKGQPIYDAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFV 160 (903)
Q Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v 160 (903)
......+++++++|+.++.... ++||+|+++-.... +.
T Consensus 773 ----------kr~gl~nVefiqGDa~dLp~~d-~sFDlVV~~eVLeH------L~------------------------- 810 (950)
T 3htx_A 773 ----------EACNVKSATLYDGSILEFDSRL-HDVDIGTCLEVIEH------ME------------------------- 810 (950)
T ss_dssp ----------TCSSCSEEEEEESCTTSCCTTS-CSCCEEEEESCGGG------SC-------------------------
T ss_pred ----------hhcCCCceEEEECchHhCCccc-CCeeEEEEeCchhh------CC-------------------------
Confidence 0001248999999999876543 48999996422211 11
Q ss_pred cccccHHHHHHHHHHHhhcccCCcEEEEEeC
Q 043334 161 EDQFGLGLIARAVEEGIGVIKPSGIMIFNMG 191 (903)
Q Consensus 161 ~~~~g~~~~~~~l~~~~~~LkpgG~ll~~~~ 191 (903)
......+++++.++|||| .+++...
T Consensus 811 -----dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 811 -----EDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp -----HHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred -----hHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 011236899999999999 6666554
No 465
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.03 E-value=4.2e-10 Score=125.38 Aligned_cols=129 Identities=18% Similarity=0.108 Sum_probs=93.1
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+|+.+++++|+ +.++. +++....++ .++++++.+|+.+.
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~---------------~~~v~~~~~d~~~~ 244 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDV---------------AGRWKVVEGDFLRE 244 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGG---------------TTSEEEEECCTTTC
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCC---------------CCCeEEEecCCCCC
Confidence 3578999999999999999999999999999999 45554 333322222 46899999999743
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.+ +||+|+++-..+. + .......++++++++|||||++++
T Consensus 245 ~p----~~D~v~~~~vlh~-------------~-----------------------~d~~~~~~L~~~~~~LkpgG~l~i 284 (348)
T 3lst_A 245 VP----HADVHVLKRILHN-------------W-----------------------GDEDSVRILTNCRRVMPAHGRVLV 284 (348)
T ss_dssp CC----CCSEEEEESCGGG-------------S-----------------------CHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred CC----CCcEEEEehhccC-------------C-----------------------CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 22 7999985422211 1 111123789999999999999988
Q ss_pred EeCC------------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGG------------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~------------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.... ......+++++++.||+.++++.
T Consensus 285 ~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 285 IDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp EECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred EEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 4321 12456678899999999988854
No 466
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.03 E-value=6e-10 Score=119.02 Aligned_cols=98 Identities=27% Similarity=0.405 Sum_probs=80.4
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++..++.+|+|+|+|+.+++.|+++. .++.+..+|+.+..
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------------------~~~~~~~~d~~~~~ 143 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------------------PQVTFCVASSHRLP 143 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------------------TTSEEEECCTTSCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------------------CCcEEEEcchhhCC
Confidence 578999999999999999999877789999999999999998764 36889999998765
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++.. . .+++++.++|||||.+++.
T Consensus 144 ~~~-~~fD~v~~~~~----~-----------------------------------------~~l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 144 FSD-TSMDAIIRIYA----P-----------------------------------------CKAEELARVVKPGGWVITA 177 (269)
T ss_dssp BCT-TCEEEEEEESC----C-----------------------------------------CCHHHHHHHEEEEEEEEEE
T ss_pred CCC-CceeEEEEeCC----h-----------------------------------------hhHHHHHHhcCCCcEEEEE
Confidence 433 38999996421 0 2378889999999999997
Q ss_pred eCCCC
Q 043334 190 MGGRP 194 (903)
Q Consensus 190 ~~~~~ 194 (903)
.+...
T Consensus 178 ~~~~~ 182 (269)
T 1p91_A 178 TPGPR 182 (269)
T ss_dssp EECTT
T ss_pred EcCHH
Confidence 76543
No 467
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.03 E-value=6e-10 Score=121.67 Aligned_cols=90 Identities=20% Similarity=0.259 Sum_probs=69.6
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhh
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEK 91 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~ 91 (903)
.+...+.+.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+++|+..+++
T Consensus 29 ~i~~~i~~~~~~-----~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~------------ 89 (299)
T 2h1r_A 29 GILDKIIYAAKI-----KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGY------------ 89 (299)
T ss_dssp HHHHHHHHHHCC-----CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTC------------
T ss_pred HHHHHHHHhcCC-----CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCC------------
Confidence 444444444432 35689999999999999999986 67999999999999999999876665
Q ss_pred cccCCcEEEEEccccccccCCCCceeEEEECCCCCC
Q 043334 92 KTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQIL 127 (903)
Q Consensus 92 ~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~ 127 (903)
++++++++|+.+.... +||+|++||||..
T Consensus 90 ----~~v~~~~~D~~~~~~~---~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 90 ----NNLEVYEGDAIKTVFP---KFDVCTANIPYKI 118 (299)
T ss_dssp ----CCEEC----CCSSCCC---CCSEEEEECCGGG
T ss_pred ----CceEEEECchhhCCcc---cCCEEEEcCCccc
Confidence 4799999999887532 7999999999983
No 468
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.02 E-value=5.3e-10 Score=126.02 Aligned_cols=105 Identities=20% Similarity=0.153 Sum_probs=86.5
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCc-EEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLP-SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDR-VEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~-~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~-v~~~~gDl~~ 107 (903)
++.+|||++||+|.+++.++...++ .+|+++|+|+.+++.+++|++.|+++ ++ ++++++|+.+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~---------------~~~v~v~~~Da~~ 116 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP---------------EDRYEIHGMEANF 116 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC---------------GGGEEEECSCHHH
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC---------------CceEEEEeCCHHH
Confidence 4689999999999999999987544 68999999999999999999999983 35 9999999988
Q ss_pred ccc-CCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEE
Q 043334 108 YCR-DHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIM 186 (903)
Q Consensus 108 ~~~-~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~l 186 (903)
... ...++||+|+.|| |.. . ..+++.+.+.|+|||.+
T Consensus 117 ~l~~~~~~~fD~V~lDP-~g~------~-----------------------------------~~~l~~a~~~Lk~gGll 154 (392)
T 3axs_A 117 FLRKEWGFGFDYVDLDP-FGT------P-----------------------------------VPFIESVALSMKRGGIL 154 (392)
T ss_dssp HHHSCCSSCEEEEEECC-SSC------C-----------------------------------HHHHHHHHHHEEEEEEE
T ss_pred HHHHhhCCCCcEEEECC-CcC------H-----------------------------------HHHHHHHHHHhCCCCEE
Confidence 764 3334799999998 210 0 14677888899999998
Q ss_pred EEEeC
Q 043334 187 IFNMG 191 (903)
Q Consensus 187 l~~~~ 191 (903)
++.+.
T Consensus 155 ~~t~t 159 (392)
T 3axs_A 155 SLTAT 159 (392)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 88774
No 469
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.01 E-value=9.5e-10 Score=119.11 Aligned_cols=127 Identities=9% Similarity=0.033 Sum_probs=87.4
Q ss_pred CCCCCeEEEeCCcc------CHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEE
Q 043334 28 ILKDKTVAELGCGN------GWITIAIAEKWL-PSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEF 100 (903)
Q Consensus 28 ~~~~~~VLDlGCGt------G~lsi~la~~~~-~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~ 100 (903)
+.++.+|||+|||+ |. ..+++..+ +.+|+|+|+++. + +++++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v----------------~~v~~ 109 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V----------------SDADS 109 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B----------------CSSSE
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C----------------CCCEE
Confidence 45688999999955 65 44566666 579999999997 1 14678
Q ss_pred -EEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhc
Q 043334 101 -HESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGV 179 (903)
Q Consensus 101 -~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~ 179 (903)
+++|+.++... ++||+|++|++........ . +...+..++..+++++.++
T Consensus 110 ~i~gD~~~~~~~--~~fD~Vvsn~~~~~~g~~~-~--------------------------d~~~~~~l~~~~l~~a~r~ 160 (290)
T 2xyq_A 110 TLIGDCATVHTA--NKWDLIISDMYDPRTKHVT-K--------------------------ENDSKEGFFTYLCGFIKQK 160 (290)
T ss_dssp EEESCGGGCCCS--SCEEEEEECCCCCC---CC-S--------------------------CCCCCCTHHHHHHHHHHHH
T ss_pred EEECccccCCcc--CcccEEEEcCCcccccccc-c--------------------------cccchHHHHHHHHHHHHHh
Confidence 99999887543 3899999996422110000 0 0112233456889999999
Q ss_pred ccCCcEEEEEeCCCCcHHHHHHHHHHCCCeEEEEE
Q 043334 180 IKPSGIMIFNMGGRPGQGVCKRLFERRGFRVDKLW 214 (903)
Q Consensus 180 LkpgG~ll~~~~~~~~~~~l~~ll~~~gf~~~~~~ 214 (903)
|||||.|++..........+.+++++.||..++..
T Consensus 161 LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 161 LALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp EEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEE
T ss_pred cCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEE
Confidence 99999999976544333455678888889876664
No 470
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.00 E-value=1.6e-08 Score=115.57 Aligned_cols=205 Identities=10% Similarity=0.048 Sum_probs=136.6
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccC----CCeEEEcCCCcHHHHHHHHHcCCEEEEecCC
Q 043334 651 IDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILE----GGTLCFPAGSNGNYVSAARFLKANIVNIPTE 726 (903)
Q Consensus 651 ~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~p----GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~ 726 (903)
..+.+.+..++.+..|.+... ..++++|++.+...++.+.+++ |+.|+++.-++.+...++...|+.++.++..
T Consensus 97 ~~~e~~~~~~~~~~lGlp~~~--~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~ 174 (450)
T 3bc8_A 97 NKITNSLVLNVIKLAGVHSVA--SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENV 174 (450)
T ss_dssp HHHHHHHHHHHHHHHTCTTCC--EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHhCCCCCCc--eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEee
Confidence 345678888888888987542 4677888874444444455554 8999999999999999999999999999763
Q ss_pred C-CCCcccCHHHHHHHhhcCC--CcEEEEECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCc
Q 043334 727 S-EVGFKMTEKTLVTILETVK--KPWVYISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWD 803 (903)
Q Consensus 727 ~-~~~f~ld~~~L~~~l~~~~--~~~vil~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s 803 (903)
. ++.+.+|++.+++++++.. .+.+++.+|+.+.+|.+-+ +++|.++|++||+++++|++|+... . .
T Consensus 175 ~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~-~-~------ 243 (450)
T 3bc8_A 175 LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQS-S-K------ 243 (450)
T ss_dssp EETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTC-H-H------
T ss_pred ecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhh-h-h------
Confidence 2 2357899999999997632 3467777777455667755 9999999999999999999996311 0 0
Q ss_pred hhhhh-hhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Q 043334 804 LEGCL-SKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFPGLSKPHSTVRYAIKKLL 873 (903)
Q Consensus 804 ~~~~~-~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~~~~~~s~~~Q~aa~~~L 873 (903)
..... ..+... .-..++.|.-|.+.. -.-.|++...+.+.++++.........++++-.....++
T Consensus 244 ~~~l~~~a~~~~----~AD~~v~S~HK~l~a-~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~ 309 (450)
T 3bc8_A 244 CMHLIQQGARVG----RIDAFVQSLDKNFMV-PVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLL 309 (450)
T ss_dssp HHHHHHHHHHHS----CCCEEEEEHHHHHSC-CSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHH
T ss_pred hHhHHHHHhccc----CCCEEEECCccCCCc-hhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHH
Confidence 00111 111110 135678999998853 333566666666577766543311122344444444444
No 471
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.00 E-value=8.5e-10 Score=115.98 Aligned_cols=45 Identities=20% Similarity=0.288 Sum_probs=39.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINL 74 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~ 74 (903)
.++++|||+|||||.++..+++. +..+|+|+|+|+.|++.|+++.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC
T ss_pred CCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC
Confidence 46789999999999999999987 3459999999999999987654
No 472
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.98 E-value=7.1e-10 Score=118.12 Aligned_cols=101 Identities=16% Similarity=0.146 Sum_probs=77.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++.. .+ +.++|+.++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~--------------------~~--~~~~d~~~~~ 109 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV--------------------KN--VVEAKAEDLP 109 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC--------------------SC--EEECCTTSCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC--------------------CC--EEECcHHHCC
Confidence 5789999999999999999887 6799999999999999998751 12 7889988765
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++.+.. ...+ + ...+++++.++|||||.+++.
T Consensus 110 ~~~-~~fD~v~~~~~~~-------------~~~~--------------------~----~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 110 FPS-GAFEAVLALGDVL-------------SYVE--------------------N----KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp SCT-TCEEEEEECSSHH-------------HHCS--------------------C----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC-CCEEEEEEcchhh-------------hccc--------------------c----HHHHHHHHHHHcCCCeEEEEE
Confidence 433 4899999642211 0000 0 237899999999999999997
Q ss_pred eCC
Q 043334 190 MGG 192 (903)
Q Consensus 190 ~~~ 192 (903)
...
T Consensus 152 ~~~ 154 (260)
T 2avn_A 152 VDN 154 (260)
T ss_dssp EEB
T ss_pred eCC
Confidence 654
No 473
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.98 E-value=1.9e-09 Score=119.26 Aligned_cols=143 Identities=16% Similarity=0.159 Sum_probs=97.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcc---cccCCCCcchhhhcccCCcEEEEEccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNA---LDEKGQPIYDAEKKTLLDRVEFHESDL 105 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~g---l~~~~~~~~~~~~~~~~~~v~~~~gDl 105 (903)
..+++|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++++...+ +++ ...++++++.+|.
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~d-----------p~~~rv~vi~~Da 254 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDN-----------LKGDCYQVLIEDC 254 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSS-----------SEETTEEEEESCH
T ss_pred CCCCEEEEEECChhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhccccccc-----------cCCCcEEEEECcH
Confidence 467899999999999999988764 5899999999999999999974221 110 0013799999999
Q ss_pred cccccC---CCCceeEEEECCCCCCC-CCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhccc
Q 043334 106 LAYCRD---HDIQLERIVGCIPQILN-PNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIK 181 (903)
Q Consensus 106 ~~~~~~---~~~~fD~Iv~NpPy~~~-~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lk 181 (903)
.++... ..++||+||.+||.++. ..... ....++++.+++.+.++|+
T Consensus 255 ~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~-----------------------------L~t~eFy~~~~~~~~~~L~ 305 (364)
T 2qfm_A 255 IPVLKRYAKEGREFDYVINDLTAVPISTSPEE-----------------------------DSTWEFLRLILDLSMKVLK 305 (364)
T ss_dssp HHHHHHHHHHTCCEEEEEEECCSSCCCCC---------------------------------CHHHHHHHHHHHHHHTEE
T ss_pred HHHHHhhhccCCCceEEEECCCCcccCcCchh-----------------------------hhHHHHHHHHHHHHHhhCC
Confidence 998653 23489999999877321 11100 0112445567777799999
Q ss_pred CCcEEEEEeCCCCcHHHHHHHHHH---CCCeEEEE
Q 043334 182 PSGIMIFNMGGRPGQGVCKRLFER---RGFRVDKL 213 (903)
Q Consensus 182 pgG~ll~~~~~~~~~~~l~~ll~~---~gf~~~~~ 213 (903)
|||++++..++....+. ..++++ .-|..+..
T Consensus 306 pgGilv~qs~s~~~~e~-~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 306 QDGKYFTQGNCVNLTEA-LSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp EEEEEEEEEEETTCHHH-HHHHHHHHTTSSSCEEE
T ss_pred CCcEEEEEcCCcchHHH-HHHHHHHHHHhCCceEE
Confidence 99999998776554433 233332 23654444
No 474
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.97 E-value=3.7e-09 Score=118.79 Aligned_cols=124 Identities=16% Similarity=0.112 Sum_probs=92.2
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.+..+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|+++ ++++++.+|+.+.
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------------------~~v~~~~~d~~~~ 258 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF----------------------SGVEHLGGDMFDG 258 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------------------TTEEEEECCTTTC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc----------------------CCCEEEecCCCCC
Confidence 4568999999999999999999999999999999 8898876531 4799999999874
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
. +. . |+|+++-.. +.+ ..+...++++++++.|||||++++
T Consensus 259 ~-p~--~-D~v~~~~vl-------------h~~-----------------------~~~~~~~~l~~~~~~L~pgG~l~i 298 (368)
T 3reo_A 259 V-PK--G-DAIFIKWIC-------------HDW-----------------------SDEHCLKLLKNCYAALPDHGKVIV 298 (368)
T ss_dssp C-CC--C-SEEEEESCG-------------GGB-----------------------CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred C-CC--C-CEEEEechh-------------hcC-----------------------CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3 32 3 999853111 111 112233789999999999999988
Q ss_pred EeCC-----------------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGG-----------------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~-----------------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.... ......++++++++||+.+++..
T Consensus 299 ~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 354 (368)
T 3reo_A 299 AEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVAS 354 (368)
T ss_dssp EECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEE
T ss_pred EEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEE
Confidence 3221 11244567899999999988743
No 475
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.97 E-value=1.6e-09 Score=113.82 Aligned_cols=142 Identities=17% Similarity=0.122 Sum_probs=98.6
Q ss_pred hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhc
Q 043334 13 WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKK 92 (903)
Q Consensus 13 w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~ 92 (903)
+...||..+...- .+..+|||||||+|.+++.++...|..+++|+|+|+.|++.+++|+..+|+
T Consensus 118 ~lD~fY~~i~~~i---~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~------------- 181 (281)
T 3lcv_B 118 HLDEFYRELFRHL---PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV------------- 181 (281)
T ss_dssp GHHHHHHHHGGGS---CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC-------------
T ss_pred hHHHHHHHHHhcc---CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-------------
Confidence 4445566433322 246799999999999999998877889999999999999999999999987
Q ss_pred ccCCcEEEEEccccccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHH
Q 043334 93 TLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARA 172 (903)
Q Consensus 93 ~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~ 172 (903)
+..+.++|+....++. +||++++|- ..+.+.... .| ..
T Consensus 182 ----~~~~~v~D~~~~~p~~--~~DvaL~lk------ti~~Le~q~-------------------------kg-----~g 219 (281)
T 3lcv_B 182 ----PHRTNVADLLEDRLDE--PADVTLLLK------TLPCLETQQ-------------------------RG-----SG 219 (281)
T ss_dssp ----CEEEEECCTTTSCCCS--CCSEEEETT------CHHHHHHHS-------------------------TT-----HH
T ss_pred ----CceEEEeeecccCCCC--CcchHHHHH------HHHHhhhhh-------------------------hH-----HH
Confidence 5889999998776554 899998541 111111110 11 23
Q ss_pred HHHHhhcccCCcEEEEEeC----C-CC-----cHHHHHHHHHHCCCeEEEE
Q 043334 173 VEEGIGVIKPSGIMIFNMG----G-RP-----GQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 173 l~~~~~~LkpgG~ll~~~~----~-~~-----~~~~l~~ll~~~gf~~~~~ 213 (903)
+ .+.+.|+++|.++-.-. + .. -...+++.+.+.|+.+.+.
T Consensus 220 ~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~ 269 (281)
T 3lcv_B 220 W-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRL 269 (281)
T ss_dssp H-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred H-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeee
Confidence 4 67788999999886222 1 11 2234466677788866555
No 476
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.96 E-value=9.3e-09 Score=120.73 Aligned_cols=190 Identities=16% Similarity=0.180 Sum_probs=116.7
Q ss_pred cccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhC-------------CCEEEEEeCCHHHHHHHHHH
Q 043334 7 IFIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWL-------------PSKVYGLDINPRAIRISWIN 73 (903)
Q Consensus 7 vfiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~-------------~~~V~giDis~~al~~A~~n 73 (903)
.|.|++-...+.+.+... .+.+|+|.+||||.+.+.+.+... ...++|+|+++.+..+|+.|
T Consensus 199 fyTP~~Vv~lmv~l~~p~-----~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 199 FYTPRPVVRFMVEVMDPQ-----LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp CCCCHHHHHHHHHHHCCC-----TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred ECCcHHHHHHHHHhhccC-----CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 688886655555555432 467999999999999988766432 24699999999999999999
Q ss_pred HHhcccccCCCCcchhhhcccCCcEEEEEccccccccCC---CCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhc
Q 043334 74 LYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYCRDH---DIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSL 150 (903)
Q Consensus 74 ~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~~~~---~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l 150 (903)
+..+|.+ ...+..+|.+..+... ..+||+|++||||....... .....+..
T Consensus 274 l~lhg~~----------------~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~-----~~~~~~~~----- 327 (530)
T 3ufb_A 274 LLLHGLE----------------YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKG-----ILGNFPED----- 327 (530)
T ss_dssp HHHHTCS----------------CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHH-----HHTTSCGG-----
T ss_pred HHhcCCc----------------cccccccccccCchhhhcccccceEEEecCCCCcccccc-----ccccCchh-----
Confidence 9998873 4567788876543211 23799999999997432211 11000000
Q ss_pred cccccccccccccccHHHHHHHHHHHhhccc-------CCcEEEEEeCC-----CCcHHHHHHHHHHCCCeEEEEEehhh
Q 043334 151 SNYCALQGFVEDQFGLGLIARAVEEGIGVIK-------PSGIMIFNMGG-----RPGQGVCKRLFERRGFRVDKLWQTKI 218 (903)
Q Consensus 151 ~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lk-------pgG~ll~~~~~-----~~~~~~l~~ll~~~gf~~~~~~~~~~ 218 (903)
..... ....|+..+.+.|| |||++.+.++. ......+++.+-+.+ .+..++
T Consensus 328 ---------~~~~~---~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~~-~l~aII---- 390 (530)
T 3ufb_A 328 ---------MQTAE---TAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNF-NLHTIV---- 390 (530)
T ss_dssp ---------GCCCB---HHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHHS-EEEEEE----
T ss_pred ---------cccch---hHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhcC-EEEEEE----
Confidence 00000 11246666766665 79999997763 222233455554443 232221
Q ss_pred hccCCCcccCCCCcc-eeeeeeccCCcc
Q 043334 219 LQASEPFFASDTDIS-ALVEIEKNSPHR 245 (903)
Q Consensus 219 ~~~~~~~~~~~~~i~-~l~~~e~~~~~~ 245 (903)
......|+..+.+. .++.+.|+.+..
T Consensus 391 -~LP~~~F~~~tgi~t~Il~~~K~~~~~ 417 (530)
T 3ufb_A 391 -RLPEGVFAPYTDIAGNLLFFDRSGPTD 417 (530)
T ss_dssp -ECCTTTTTTTCCCCEEEEEEESSSCCC
T ss_pred -ECCcccCcCCCCCcEEEEEEECCCCCC
Confidence 23445666656665 466677765443
No 477
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.95 E-value=1.6e-09 Score=117.83 Aligned_cols=77 Identities=23% Similarity=0.314 Sum_probs=66.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.+++++. +. ++++++++|+.+..
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~--~~----------------~~v~vi~gD~l~~~ 109 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKE--LY----------------NNIEIIWGDALKVD 109 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHH--HC----------------SSEEEEESCTTTSC
T ss_pred CcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhc--cC----------------CCeEEEECchhhCC
Confidence 5689999999999999999998 6899999999999999999985 22 47999999999865
Q ss_pred cCCCCceeEEEECCCCCC
Q 043334 110 RDHDIQLERIVGCIPQIL 127 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~ 127 (903)
.... .||+|++|+||..
T Consensus 110 ~~~~-~fD~Iv~NlPy~i 126 (295)
T 3gru_A 110 LNKL-DFNKVVANLPYQI 126 (295)
T ss_dssp GGGS-CCSEEEEECCGGG
T ss_pred cccC-CccEEEEeCcccc
Confidence 4432 6999999999973
No 478
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.95 E-value=2.6e-09 Score=115.46 Aligned_cols=138 Identities=12% Similarity=0.036 Sum_probs=91.0
Q ss_pred HHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccC
Q 043334 16 TFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLL 95 (903)
Q Consensus 16 ~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~ 95 (903)
.+.+.|..... ..++.+|||+|||||.++..+++. +..+|+|+|+++.|++.+.++-
T Consensus 72 Kl~~~l~~~~~-~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~--------------------- 128 (291)
T 3hp7_A 72 KLEKALAVFNL-SVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQD--------------------- 128 (291)
T ss_dssp HHHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTC---------------------
T ss_pred HHHHHHHhcCC-CccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC---------------------
Confidence 44455554432 246789999999999999998886 4569999999999999864321
Q ss_pred CcEEEE-EccccccccC--CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHH
Q 043334 96 DRVEFH-ESDLLAYCRD--HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARA 172 (903)
Q Consensus 96 ~~v~~~-~gDl~~~~~~--~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~ 172 (903)
+++... ..|+...... ...+||+|+++.-++. + ..+
T Consensus 129 ~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s------l-----------------------------------~~v 167 (291)
T 3hp7_A 129 DRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS------L-----------------------------------NLI 167 (291)
T ss_dssp TTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC------G-----------------------------------GGT
T ss_pred cccceecccCceecchhhCCCCCCCEEEEEeeHhh------H-----------------------------------HHH
Confidence 233333 2344333211 1125999997644431 1 156
Q ss_pred HHHHhhcccCCcEEEEEeCC------------CC---------cHHHHHHHHHHCCCeEEEEEehh
Q 043334 173 VEEGIGVIKPSGIMIFNMGG------------RP---------GQGVCKRLFERRGFRVDKLWQTK 217 (903)
Q Consensus 173 l~~~~~~LkpgG~ll~~~~~------------~~---------~~~~l~~ll~~~gf~~~~~~~~~ 217 (903)
+.++.++|||||.+++.+.. .. ....+.+++.+.||.+.......
T Consensus 168 L~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~sp 233 (291)
T 3hp7_A 168 LPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSP 233 (291)
T ss_dssp HHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECS
T ss_pred HHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
Confidence 89999999999999985221 00 22345677889999988875443
No 479
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.95 E-value=4.5e-11 Score=126.62 Aligned_cols=95 Identities=25% Similarity=0.360 Sum_probs=73.2
Q ss_pred ccCcchhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcc
Q 043334 8 FIPEDWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIY 87 (903)
Q Consensus 8 fiP~~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~ 87 (903)
+++..+...+.+.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|++|+. +
T Consensus 12 l~~~~~~~~i~~~~~~-----~~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~--~--------- 73 (245)
T 1yub_A 12 LTSEKVLNQIIKQLNL-----KETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLK--L--------- 73 (245)
T ss_dssp CCCTTTHHHHHHHCCC-----CSSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTT--T---------
T ss_pred CCCHHHHHHHHHhcCC-----CCCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhc--c---------
Confidence 3444555555554432 25679999999999999999988 4899999999999999987763 1
Q ss_pred hhhhcccCCcEEEEEccccccccCCCCceeEEEECCCCCCC
Q 043334 88 DAEKKTLLDRVEFHESDLLAYCRDHDIQLERIVGCIPQILN 128 (903)
Q Consensus 88 ~~~~~~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~NpPy~~~ 128 (903)
.++++++++|+.+......++| .|++||||...
T Consensus 74 -------~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 74 -------NTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp -------CSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSC
T ss_pred -------CCceEEEECChhhcCcccCCCc-EEEEeCCcccc
Confidence 2479999999988754432479 88999999854
No 480
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.95 E-value=1.2e-09 Score=116.34 Aligned_cols=89 Identities=17% Similarity=0.190 Sum_probs=70.6
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhh
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEK 91 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~ 91 (903)
.+...+.+.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+|++|++.+++++..
T Consensus 16 ~i~~~iv~~~~~-----~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~--------------- 73 (255)
T 3tqs_A 16 FVLQKIVSAIHP-----QKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ--------------- 73 (255)
T ss_dssp HHHHHHHHHHCC-----CTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT---------------
T ss_pred HHHHHHHHhcCC-----CCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh---------------
Confidence 445555555442 24689999999999999999987 57999999999999999998843
Q ss_pred cccCCcEEEEEccccccccCC---CCceeEEEECCCCC
Q 043334 92 KTLLDRVEFHESDLLAYCRDH---DIQLERIVGCIPQI 126 (903)
Q Consensus 92 ~~~~~~v~~~~gDl~~~~~~~---~~~fD~Iv~NpPy~ 126 (903)
.++++++++|+.+..... +++|| ||+||||.
T Consensus 74 ---~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 74 ---QKNITIYQNDALQFDFSSVKTDKPLR-VVGNLPYN 107 (255)
T ss_dssp ---CTTEEEEESCTTTCCGGGSCCSSCEE-EEEECCHH
T ss_pred ---CCCcEEEEcchHhCCHHHhccCCCeE-EEecCCcc
Confidence 147999999998875432 23688 89999997
No 481
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.94 E-value=1.3e-09 Score=116.58 Aligned_cols=123 Identities=7% Similarity=-0.079 Sum_probs=88.7
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc--ccccCCCCcchhhhcccCCcEEEEEccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN--ALDEKGQPIYDAEKKTLLDRVEFHESDLLA 107 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~--gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~ 107 (903)
.+++|||+|||+|.++..+++. + .+|+++|+|+.+++.|++++... +++ .++++++.+|..+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~--------------~~rv~~~~~D~~~ 135 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKN--------------NKNFTHAKQLLDL 135 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHT--------------CTTEEEESSGGGS
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccC--------------CCeEEEEechHHH
Confidence 4679999999999999998887 6 89999999999999999875321 111 2589999999988
Q ss_pred cccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEE
Q 043334 108 YCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMI 187 (903)
Q Consensus 108 ~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll 187 (903)
+. ++||+|+++.+ +. ..+++.+.+.|+|||+++
T Consensus 136 ~~----~~fD~Ii~d~~-----dp--------------------------------------~~~~~~~~~~L~pgG~lv 168 (262)
T 2cmg_A 136 DI----KKYDLIFCLQE-----PD--------------------------------------IHRIDGLKRMLKEDGVFI 168 (262)
T ss_dssp CC----CCEEEEEESSC-----CC--------------------------------------HHHHHHHHTTEEEEEEEE
T ss_pred HH----hhCCEEEECCC-----Ch--------------------------------------HHHHHHHHHhcCCCcEEE
Confidence 75 38999997521 00 036889999999999999
Q ss_pred EEeCCCC-cHHHHHHHHHH--CCCeEEEEEe
Q 043334 188 FNMGGRP-GQGVCKRLFER--RGFRVDKLWQ 215 (903)
Q Consensus 188 ~~~~~~~-~~~~l~~ll~~--~gf~~~~~~~ 215 (903)
+..+... ....++.+.+. .-|.....+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~ 199 (262)
T 2cmg_A 169 SVAKHPLLEHVSMQNALKNMGGVFSVAMPFV 199 (262)
T ss_dssp EEEECTTTCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEcCCcccCHHHHHHHHHHHHHhCCceEEEE
Confidence 9765432 22233333222 2376665543
No 482
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.93 E-value=3.7e-08 Score=111.56 Aligned_cols=181 Identities=9% Similarity=0.056 Sum_probs=124.0
Q ss_pred HHHHHHHhhcCCCCCCCCcEEecCchHHHHHHHHHHhccC----CCeEEEcCCCcHHHHHHHHHcCCEEEEecCCC-CCC
Q 043334 656 SIQQYIKSNFGFPIDINAEFIYADCSQSLFNKLVLCCILE----GGTLCFPAGSNGNYVSAARFLKANIVNIPTES-EVG 730 (903)
Q Consensus 656 ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ll~~l~~p----GD~Vlv~~P~y~~~~~~~~~~G~~vv~v~~~~-~~~ 730 (903)
.+.+|++. .|++... ..++++|++.+...++.+.+++ ||.|+++..++.+....+...|++++.++... ++.
T Consensus 121 l~ld~L~~-~G~~~~~--~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 121 LVLDIIKL-AGVHTVA--NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHHHH-TTCTTCC--EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTE
T ss_pred HHHHHHHH-cCCCCCC--cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccc
Confidence 34566666 4998652 5899999997776667777764 49999999999999999999999999998732 235
Q ss_pred cccCHHHHHHHhhcCC--CcEEE-EECCCCCCcccCCCHHHHHHHHHHHHhCCcEEEEecCCCCCc-cCCCCCCCCchhh
Q 043334 731 FKMTEKTLVTILETVK--KPWVY-ISGPTINPTGLLYSNKEIENILTVCAKYGARVVIDTAFSGLE-FNYEGWGGWDLEG 806 (903)
Q Consensus 731 f~ld~~~L~~~l~~~~--~~~vi-l~~P~~NPTG~v~s~eel~eI~~ia~k~~i~VI~DeaY~~l~-f~~~~~s~~s~~~ 806 (903)
+.+|++.+++++++.. ..+++ .+.|+ |-.|.+- ++++|.++|++||+++++|++|+... |.. .++.
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~-y~p~~~d---dI~eIaeIch~~gIpllVDeAhGah~~~~~------~lp~ 267 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSC-FAPRVPD---RLEELAVICANYDIPHIVNNAYGVQSSKCM------HLIQ 267 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSC-CTTBCCC---CHHHHHHHHHHHTCCEEEECTTCTTCHHHH------HHHH
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCC-CCCcccc---cHHHHHHHHHHcCCeEEEeCcchhhhhhhh------hhHH
Confidence 7899999999997642 12333 34444 5334444 49999999999999999999995321 110 1111
Q ss_pred hhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcHHHHHHHHhCC
Q 043334 807 CLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHPQLVDAFSSFP 856 (903)
Q Consensus 807 ~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~~li~~l~~~~ 856 (903)
....+.. -.+++.|.-|.+-.| +..|.+...++++++++...-
T Consensus 268 sA~~~Gr------AD~vVqS~HK~llvp-IGG~ii~~~d~e~l~~~~~~y 310 (501)
T 3hl2_A 268 QGARVGR------IDAFVQSLDKNFMVP-VGGAIIAGFNDSFIQEISKMY 310 (501)
T ss_dssp HHHHHSC------CCEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHHTS
T ss_pred HHHhcCC------CcEEEecccccceee-cCceEEEeCCHHHHHHHHHhC
Confidence 1111211 357899999998554 122344466666888776543
No 483
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.92 E-value=3.9e-09 Score=118.45 Aligned_cols=124 Identities=16% Similarity=0.074 Sum_probs=91.8
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.+..+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|+++ ++++++.+|+.+.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------------------~~v~~~~~D~~~~ 256 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF----------------------PGVTHVGGDMFKE 256 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------------------TTEEEEECCTTTC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc----------------------CCeEEEeCCcCCC
Confidence 3568999999999999999999999999999999 8888776531 4799999999883
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.+. . |+|++.-. .+.+ ..+...++++++++.|||||++++
T Consensus 257 -~p~--~-D~v~~~~v-------------lh~~-----------------------~d~~~~~~L~~~~~~L~pgG~l~i 296 (364)
T 3p9c_A 257 -VPS--G-DTILMKWI-------------LHDW-----------------------SDQHCATLLKNCYDALPAHGKVVL 296 (364)
T ss_dssp -CCC--C-SEEEEESC-------------GGGS-----------------------CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -CCC--C-CEEEehHH-------------hccC-----------------------CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 332 3 99984211 1111 112234789999999999999988
Q ss_pred EeCC-----------------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 NMGG-----------------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~~~~-----------------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
.... ....+.++++++++||+.+++..
T Consensus 297 ~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 352 (364)
T 3p9c_A 297 VQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTY 352 (364)
T ss_dssp EECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEE
T ss_pred EEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 3211 11244567889999999888743
No 484
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.91 E-value=8e-10 Score=124.87 Aligned_cols=80 Identities=19% Similarity=0.092 Sum_probs=68.3
Q ss_pred CCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc--ccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 31 DKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLN--ALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 31 ~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~--gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
+.+|||+|||+|..++.+++. +.+|+|+|+|+.|++.|++|+..+ |+ ++++++++|+.++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl----------------~~i~~i~~Da~~~ 155 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEG----------------KDVNILTGDFKEY 155 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTT----------------CEEEEEESCGGGS
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCC----------------CcEEEEECcHHHh
Confidence 789999999999999999876 679999999999999999999887 65 4899999999886
Q ss_pred ccC-CCCceeEEEECCCCCCC
Q 043334 109 CRD-HDIQLERIVGCIPQILN 128 (903)
Q Consensus 109 ~~~-~~~~fD~Iv~NpPy~~~ 128 (903)
... ...+||+|++||||...
T Consensus 156 L~~~~~~~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 156 LPLIKTFHPDYIYVDPARRSG 176 (410)
T ss_dssp HHHHHHHCCSEEEECCEEC--
T ss_pred hhhccCCCceEEEECCCCcCC
Confidence 332 11279999999999864
No 485
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.90 E-value=6.6e-10 Score=118.70 Aligned_cols=81 Identities=15% Similarity=0.060 Sum_probs=67.6
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCH-------HHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEE
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINP-------RAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHE 102 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~-------~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~ 102 (903)
++.+|||+|||+|.+++.+|.. +.+|+|+|+|+ ++++.|++|+..+++. .++++++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~---------------~ri~~~~ 145 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTA---------------ARINLHF 145 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH---------------TTEEEEE
T ss_pred CcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc---------------cCeEEEE
Confidence 5679999999999999999986 67999999999 9999999999888762 4699999
Q ss_pred ccccccccCC-C--CceeEEEECCCCCC
Q 043334 103 SDLLAYCRDH-D--IQLERIVGCIPQIL 127 (903)
Q Consensus 103 gDl~~~~~~~-~--~~fD~Iv~NpPy~~ 127 (903)
+|+.++.... + ++||+|++||||..
T Consensus 146 ~d~~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 146 GNAAEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp SCHHHHHHHHHHHHCCCSEEEECCCC--
T ss_pred CCHHHHHHhhhccCCCccEEEECCCCCC
Confidence 9998864311 1 27999999999965
No 486
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.90 E-value=3.2e-09 Score=119.35 Aligned_cols=124 Identities=16% Similarity=0.095 Sum_probs=91.6
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++.+|..+++++|+ +.+++.|++. ++++++.+|+.+.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------------------~~v~~~~~d~~~~ 264 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------------------SGIEHVGGDMFAS 264 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------------------TTEEEEECCTTTC
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------------------CCCEEEeCCcccC
Confidence 4568999999999999999999998899999999 9999877531 3699999999873
Q ss_pred ccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEE
Q 043334 109 CRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIF 188 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~ 188 (903)
.+ .||+|+++-.... + .......+++++.++|||||++++
T Consensus 265 -~~---~~D~v~~~~~lh~-------------~-----------------------~d~~~~~~l~~~~~~L~pgG~l~i 304 (372)
T 1fp1_D 265 -VP---QGDAMILKAVCHN-------------W-----------------------SDEKCIEFLSNCHKALSPNGKVII 304 (372)
T ss_dssp -CC---CEEEEEEESSGGG-------------S-----------------------CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CC---CCCEEEEeccccc-------------C-----------------------CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 22 3999986422111 1 011123789999999999999998
Q ss_pred E---eCC-------------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 189 N---MGG-------------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 189 ~---~~~-------------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
. .+. ......+++++++.||+.++.+.
T Consensus 305 ~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 305 VEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp EEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred EEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 4 111 11344567788899998877743
No 487
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.90 E-value=1.6e-09 Score=116.28 Aligned_cols=76 Identities=24% Similarity=0.169 Sum_probs=65.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++ +|||+|||+|.++..+++. +.+|+|+|+|++|++.+++++. ..+++++++|+.+..
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~-------------------~~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLS-------------------GLPVRLVFQDALLYP 104 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTT-------------------TSSEEEEESCGGGSC
T ss_pred CC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcC-------------------CCCEEEEECChhhCC
Confidence 46 9999999999999999987 5799999999999999998873 137999999999875
Q ss_pred cCCCCceeEEEECCCCCC
Q 043334 110 RDHDIQLERIVGCIPQIL 127 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~ 127 (903)
......+|.|++|+||..
T Consensus 105 ~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 105 WEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp GGGSCTTEEEEEEECSSC
T ss_pred hhhccCccEEEecCcccc
Confidence 543226899999999985
No 488
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.87 E-value=4.3e-09 Score=111.40 Aligned_cols=77 Identities=19% Similarity=0.351 Sum_probs=64.4
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.++.+|||+|||+|.++..+++. +.+|+|+|+|++|++.+++++... ++++++++|+.+.
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~------------------~~v~~~~~D~~~~ 88 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQR--CNFVTAIEIDHKLCKTTENKLVDH------------------DNFQVLNKDILQF 88 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHTTTC------------------CSEEEECCCGGGC
T ss_pred CCCCEEEEEeCCchHHHHHHHHc--CCeEEEEECCHHHHHHHHHhhccC------------------CCeEEEEChHHhC
Confidence 35789999999999999999998 489999999999999999887321 4799999999987
Q ss_pred ccCCCCceeEEEECCCCC
Q 043334 109 CRDHDIQLERIVGCIPQI 126 (903)
Q Consensus 109 ~~~~~~~fD~Iv~NpPy~ 126 (903)
.......| .|++||||.
T Consensus 89 ~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 89 KFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp CCCSSCCC-EEEEECCGG
T ss_pred CcccCCCe-EEEEeCCcc
Confidence 55432245 689999997
No 489
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.87 E-value=7.4e-09 Score=106.56 Aligned_cols=108 Identities=20% Similarity=0.302 Sum_probs=81.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+ +.+|+|+|+|+. . +.+.++|+.+..
T Consensus 67 ~~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~------------~-------------------~~~~~~d~~~~~ 110 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI-----RNPVHCFDLASL------------D-------------------PRVTVCDMAQVP 110 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC-----CSCEEEEESSCS------------S-------------------TTEEESCTTSCS
T ss_pred CCCeEEEECCcCCHHHHHh-----hccEEEEeCCCC------------C-------------------ceEEEeccccCC
Confidence 5689999999999998876 268999999987 1 346788888764
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCcEEEEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSGIMIFN 189 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG~ll~~ 189 (903)
... ++||+|+++..... .+ ...+++++.++|+|||.+++.
T Consensus 111 ~~~-~~fD~v~~~~~l~~-~~--------------------------------------~~~~l~~~~~~L~~gG~l~i~ 150 (215)
T 2zfu_A 111 LED-ESVDVAVFCLSLMG-TN--------------------------------------IRDFLEEANRVLKPGGLLKVA 150 (215)
T ss_dssp CCT-TCEEEEEEESCCCS-SC--------------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC-CCEeEEEEehhccc-cC--------------------------------------HHHHHHHHHHhCCCCeEEEEE
Confidence 333 48999998654431 10 126799999999999999986
Q ss_pred eCCC--CcHHHHHHHHHHCCCeEEEE
Q 043334 190 MGGR--PGQGVCKRLFERRGFRVDKL 213 (903)
Q Consensus 190 ~~~~--~~~~~l~~ll~~~gf~~~~~ 213 (903)
.... .....+.+++++.||.++..
T Consensus 151 ~~~~~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 151 EVSSRFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp ECGGGCSCHHHHHHHHHHTTEEEEEE
T ss_pred EcCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 4432 35677788999999998775
No 490
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.86 E-value=4.5e-09 Score=117.17 Aligned_cols=123 Identities=14% Similarity=0.113 Sum_probs=91.3
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|++. ++++++.+|+.+..
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------------------~~v~~~~~d~~~~~ 244 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------------------NNLTYVGGDMFTSI 244 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------------------TTEEEEECCTTTCC
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------------------CCcEEEeccccCCC
Confidence 568999999999999999999999999999999 9999877531 35999999997732
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccC---CcEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKP---SGIM 186 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkp---gG~l 186 (903)
+ .||+|+++-..+. + .......+++++.++||| ||++
T Consensus 245 -p---~~D~v~~~~~lh~-------------~-----------------------~d~~~~~~l~~~~~~L~p~~~gG~l 284 (352)
T 1fp2_A 245 -P---NADAVLLKYILHN-------------W-----------------------TDKDCLRILKKCKEAVTNDGKRGKV 284 (352)
T ss_dssp -C---CCSEEEEESCGGG-------------S-----------------------CHHHHHHHHHHHHHHHSGGGCCCEE
T ss_pred -C---CccEEEeehhhcc-------------C-----------------------CHHHHHHHHHHHHHhCCCCCCCcEE
Confidence 2 4999986422211 1 011123789999999999 9998
Q ss_pred EEEeC---C------------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 187 IFNMG---G------------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 187 l~~~~---~------------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
++... . ......+++++++.||+.++.+.
T Consensus 285 ~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 285 TIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp EEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 88421 1 11235667889999999887743
No 491
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.86 E-value=4.9e-09 Score=117.13 Aligned_cols=96 Identities=15% Similarity=0.192 Sum_probs=72.2
Q ss_pred CCCeEEEeCCc------cCHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEE
Q 043334 30 KDKTVAELGCG------NGWITIAIAEKW-LPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHE 102 (903)
Q Consensus 30 ~~~~VLDlGCG------tG~lsi~la~~~-~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~ 102 (903)
++.+||||||| +|..++.+++.+ |+.+|+|+|+|+.|. . . .+++++++
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~-~----------------~~rI~fv~ 270 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V-D----------------ELRIRTIQ 270 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G-C----------------BTTEEEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h-c----------------CCCcEEEE
Confidence 56899999999 777888887764 788999999999972 0 1 15899999
Q ss_pred ccccccccC-----CCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHh
Q 043334 103 SDLLAYCRD-----HDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGI 177 (903)
Q Consensus 103 gDl~~~~~~-----~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~ 177 (903)
+|+.++... ..++||+|+++-- +.. .....+|++++
T Consensus 271 GDa~dlpf~~~l~~~d~sFDlVisdgs-------H~~--------------------------------~d~~~aL~el~ 311 (419)
T 3sso_A 271 GDQNDAEFLDRIARRYGPFDIVIDDGS-------HIN--------------------------------AHVRTSFAALF 311 (419)
T ss_dssp CCTTCHHHHHHHHHHHCCEEEEEECSC-------CCH--------------------------------HHHHHHHHHHG
T ss_pred ecccccchhhhhhcccCCccEEEECCc-------ccc--------------------------------hhHHHHHHHHH
Confidence 999886432 0238999996410 111 11337899999
Q ss_pred hcccCCcEEEEE
Q 043334 178 GVIKPSGIMIFN 189 (903)
Q Consensus 178 ~~LkpgG~ll~~ 189 (903)
++|||||++++.
T Consensus 312 rvLKPGGvlVi~ 323 (419)
T 3sso_A 312 PHVRPGGLYVIE 323 (419)
T ss_dssp GGEEEEEEEEEE
T ss_pred HhcCCCeEEEEE
Confidence 999999999994
No 492
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.84 E-value=1.8e-09 Score=116.43 Aligned_cols=116 Identities=14% Similarity=0.059 Sum_probs=76.7
Q ss_pred CCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEE--Eccc
Q 043334 28 ILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFH--ESDL 105 (903)
Q Consensus 28 ~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~--~gDl 105 (903)
..++.+|||+|||+|.++..+++. .+|+|+|+++ |+..++++ ... ......++.++ ++|+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~----~~~----------~~~~~~~v~~~~~~~D~ 141 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK----PRL----------VETFGWNLITFKSKVDV 141 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC----CCC----------CCCTTGGGEEEECSCCG
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc----hhh----------hhhcCCCeEEEeccCcH
Confidence 346889999999999999999886 5899999998 64333211 110 00011268999 9999
Q ss_pred cccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc-
Q 043334 106 LAYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG- 184 (903)
Q Consensus 106 ~~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG- 184 (903)
.+++ .++||+|++|..++ ... .. ... ...+ .+++++.++|||||
T Consensus 142 ~~l~---~~~fD~Vvsd~~~~-~~~--~~---~d~-------------------------~~~l-~~L~~~~r~LkpGG~ 186 (276)
T 2wa2_A 142 TKME---PFQADTVLCDIGES-NPT--AA---VEA-------------------------SRTL-TVLNVISRWLEYNQG 186 (276)
T ss_dssp GGCC---CCCCSEEEECCCCC-CSC--HH---HHH-------------------------HHHH-HHHHHHHHHHHHSTT
T ss_pred hhCC---CCCcCEEEECCCcC-CCc--hh---hhH-------------------------HHHH-HHHHHHHHHhccCCC
Confidence 8864 23899999986522 111 00 000 0001 36889999999999
Q ss_pred -EEEEEeCCCCcH
Q 043334 185 -IMIFNMGGRPGQ 196 (903)
Q Consensus 185 -~ll~~~~~~~~~ 196 (903)
.|++.+......
T Consensus 187 ~~~v~~~~~~~~~ 199 (276)
T 2wa2_A 187 CGFCVKVLNPYSC 199 (276)
T ss_dssp CEEEEEESCCCSH
T ss_pred cEEEEEeCCCCch
Confidence 999976654444
No 493
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.80 E-value=2.1e-09 Score=115.20 Aligned_cols=115 Identities=11% Similarity=-0.023 Sum_probs=75.9
Q ss_pred CCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEE--Ecccc
Q 043334 29 LKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFH--ESDLL 106 (903)
Q Consensus 29 ~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~--~gDl~ 106 (903)
.++.+|||+|||+|.++..+++. .+|+|+|+++ |+..++++ ... ......++.++ ++|+.
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~----~~~----------~~~~~~~v~~~~~~~D~~ 134 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV----PRI----------TESYGWNIVKFKSRVDIH 134 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC----CCC----------CCBTTGGGEEEECSCCTT
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh----hhh----------hhccCCCeEEEecccCHh
Confidence 46889999999999999998876 6899999998 54322211 110 00011268999 99998
Q ss_pred ccccCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccCCc--
Q 043334 107 AYCRDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKPSG-- 184 (903)
Q Consensus 107 ~~~~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~LkpgG-- 184 (903)
++. .++||+|+++..++ ... .. ..+ ...+ .+++.+.++|||||
T Consensus 135 ~l~---~~~fD~V~sd~~~~-~~~--~~---~d~-------------------------~~~l-~~L~~~~r~LkpGG~~ 179 (265)
T 2oxt_A 135 TLP---VERTDVIMCDVGES-SPK--WS---VES-------------------------ERTI-KILELLEKWKVKNPSA 179 (265)
T ss_dssp TSC---CCCCSEEEECCCCC-CSC--HH---HHH-------------------------HHHH-HHHHHHHHHHHHCTTC
T ss_pred HCC---CCCCcEEEEeCccc-CCc--cc---hhH-------------------------HHHH-HHHHHHHHHhccCCCe
Confidence 864 23899999975522 111 00 000 0001 37889999999999
Q ss_pred EEEEEeCCCCcH
Q 043334 185 IMIFNMGGRPGQ 196 (903)
Q Consensus 185 ~ll~~~~~~~~~ 196 (903)
.|++.+......
T Consensus 180 ~fv~kv~~~~~~ 191 (265)
T 2oxt_A 180 DFVVKVLCPYSV 191 (265)
T ss_dssp EEEEEESCTTSH
T ss_pred EEEEEeCCCCCh
Confidence 999976654444
No 494
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.80 E-value=2.1e-08 Score=104.48 Aligned_cols=83 Identities=14% Similarity=0.052 Sum_probs=69.1
Q ss_pred hhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhc
Q 043334 13 WSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKK 92 (903)
Q Consensus 13 w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~ 92 (903)
+...||..+-.. .++.+|||+|||+|.+++.++ ++.+++|+|||+.|++.+++++..++.
T Consensus 92 ~ld~fY~~i~~~----~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~------------- 151 (253)
T 3frh_A 92 ELDTLYDFIFSA----ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDW------------- 151 (253)
T ss_dssp GHHHHHHHHTSS----CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTC-------------
T ss_pred hHHHHHHHHhcC----CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCC-------------
Confidence 445566655544 256799999999999999977 688999999999999999999988875
Q ss_pred ccCCcEEEEEccccccccCCCCceeEEEE
Q 043334 93 TLLDRVEFHESDLLAYCRDHDIQLERIVG 121 (903)
Q Consensus 93 ~~~~~v~~~~gDl~~~~~~~~~~fD~Iv~ 121 (903)
+..+..+|....+++. +||+|+.
T Consensus 152 ----~~~~~v~D~~~~~~~~--~~DvvLl 174 (253)
T 3frh_A 152 ----DFTFALQDVLCAPPAE--AGDLALI 174 (253)
T ss_dssp ----EEEEEECCTTTSCCCC--BCSEEEE
T ss_pred ----CceEEEeecccCCCCC--CcchHHH
Confidence 6899999998876554 8999985
No 495
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.79 E-value=7.8e-09 Score=112.70 Aligned_cols=80 Identities=19% Similarity=0.201 Sum_probs=68.1
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|..+..+++.+++.+|+|+|+|++|++.|++|+..++ ++++++++|+.++.
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-----------------~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-----------------DRVSLFKVSYREAD 88 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-----------------TTEEEEECCGGGHH
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-----------------CcEEEEECCHHHHH
Confidence 5689999999999999999999877899999999999999999986654 37999999998763
Q ss_pred c--C--CCCceeEEEECCCCC
Q 043334 110 R--D--HDIQLERIVGCIPQI 126 (903)
Q Consensus 110 ~--~--~~~~fD~Iv~NpPy~ 126 (903)
. . ...+||.|++|||+.
T Consensus 89 ~~l~~~g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMDLGVS 109 (301)
T ss_dssp HHHHHTTCSCEEEEEEECSCC
T ss_pred HHHHhcCCCCCCEEEEcCccc
Confidence 1 1 113799999999875
No 496
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.76 E-value=1.3e-08 Score=109.78 Aligned_cols=90 Identities=17% Similarity=0.176 Sum_probs=68.1
Q ss_pred chhHHHHHHhhcCCCCCCCCCeEEEeCCccCHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchh
Q 043334 12 DWSFTFYEGLNRHPDSILKDKTVAELGCGNGWITIAIAEKWLP--SKVYGLDINPRAIRISWINLYLNALDEKGQPIYDA 89 (903)
Q Consensus 12 ~w~~~~~~~L~~~~~~~~~~~~VLDlGCGtG~lsi~la~~~~~--~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~ 89 (903)
.+...+.+.+.. .++.+|||+|||+|.++..+++..+. .+|+|+|+|++|++.++++. .
T Consensus 29 ~i~~~iv~~~~~-----~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~---------- 89 (279)
T 3uzu_A 29 GVIDAIVAAIRP-----ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----G---------- 89 (279)
T ss_dssp HHHHHHHHHHCC-----CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----G----------
T ss_pred HHHHHHHHhcCC-----CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----C----------
Confidence 444454554432 25689999999999999999998532 34999999999999999883 1
Q ss_pred hhcccCCcEEEEEccccccccCCC---C--ceeEEEECCCCC
Q 043334 90 EKKTLLDRVEFHESDLLAYCRDHD---I--QLERIVGCIPQI 126 (903)
Q Consensus 90 ~~~~~~~~v~~~~gDl~~~~~~~~---~--~fD~Iv~NpPy~ 126 (903)
++++++++|+.+...... . ..+.||+|+||.
T Consensus 90 ------~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 90 ------ELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp ------GGEEEEESCGGGCCGGGGSCSSSSCCEEEEEECCHH
T ss_pred ------CCcEEEECChhcCChhHhcccccCCceEEEEccCcc
Confidence 379999999988754321 0 235799999998
No 497
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=98.76 E-value=3.4e-08 Score=111.10 Aligned_cols=185 Identities=12% Similarity=0.126 Sum_probs=128.5
Q ss_pred CCCcHHHHHHHHHHHHccCC---------CCC--chHHHHHHHHHHHhhcCCCCCCCCcEEe-cCchHHHHHHHHHHhcc
Q 043334 627 LPIPSLVKAAIFESFARQNM---------SES--EIDVTPSIQQYIKSNFGFPIDINAEFIY-ADCSQSLFNKLVLCCIL 694 (903)
Q Consensus 627 ~~~p~~v~~al~~al~~y~~---------~~G--~~~lr~ala~~l~~~~G~~~~pe~~I~v-t~Gs~~al~~ll~~l~~ 694 (903)
.+.|+.|++++.+.+..+.. ..+ ..+..+..++.+++.+|.+.+ + +|++ |+|+++++++++..++.
T Consensus 22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~-~-evif~t~~~T~a~n~a~~~l~~ 99 (377)
T 3e77_A 22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDN-Y-KVIFLQGGGCGQFSAVPLNLIG 99 (377)
T ss_dssp CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTT-E-EEEEESSHHHHHHHHHHHHHGG
T ss_pred CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC-C-eEEEEcCchHHHHHHHHHhccC
Confidence 56899999999987754321 112 234456677888888888532 2 6887 68999999999999987
Q ss_pred C--CCeEEEcCCCcHHH--HHHHHHcCCEEEEecCCCCCCcccCHHHHHHHhhcCCCcEEEEECCCCCCcccCCCHHHHH
Q 043334 695 E--GGTLCFPAGSNGNY--VSAARFLKANIVNIPTESEVGFKMTEKTLVTILETVKKPWVYISGPTINPTGLLYSNKEIE 770 (903)
Q Consensus 695 p--GD~Vlv~~P~y~~~--~~~~~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~~~~vil~~P~~NPTG~v~s~eel~ 770 (903)
+ ||+|++..-++... ...++..|..++.++.+.. +..+++.++..+++++ ++|.+++-. |.||.+.+.
T Consensus 100 ~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~--~~~~~~~~~~~i~~~t-~lV~~~h~e-t~tG~~~pi---- 171 (377)
T 3e77_A 100 LKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGS--YTKIPDPSTWNLNPDA-SYVYYCANE-TVHGVEFDF---- 171 (377)
T ss_dssp GSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSS--SCSCCCGGGCCCCTTC-SCEEEESEE-TTTTEECSS----
T ss_pred CCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCC--cCCCCChHHhccCCCc-cEEEEeCcc-CchheEchh----
Confidence 6 99988776655443 3345567888777777543 3356666666677766 478888776 888999984
Q ss_pred HHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccceeeEEEeCcH
Q 043334 771 NILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALKFGFLVLNHP 846 (903)
Q Consensus 771 eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlRiG~lv~~~~ 846 (903)
+|+++|+++++|-+-+ +...+. + +... . +++.|--|.+|.+| +|+++..++
T Consensus 172 ----i~~~~~~~~~vD~~q~---~g~~~i---d-------~~~~-----~-~~~~s~~K~~gp~G--~g~l~~~~~ 222 (377)
T 3e77_A 172 ----IPDVKGAVLVCDMSSN---FLSKPV---D-------VSKF-----G-VIFAGAQKNVGSAG--VTVVIVRDD 222 (377)
T ss_dssp ----CCCCTTCCEEEECTTT---TTSSCC---C-------GGGC-----S-EEEEEGGGTTSCTT--CEEEEEETT
T ss_pred ----hhccCCCEEEEEcccc---cCCCCC---c-------hhhc-----C-EEEEecccccCCCc--cEEEEEcHH
Confidence 4778999999999874 222221 1 1121 2 46788899999888 688887654
No 498
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.76 E-value=1.2e-08 Score=114.13 Aligned_cols=123 Identities=15% Similarity=0.088 Sum_probs=90.9
Q ss_pred CCCeEEEeCCccCHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEccccccc
Q 043334 30 KDKTVAELGCGNGWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAYC 109 (903)
Q Consensus 30 ~~~~VLDlGCGtG~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~~ 109 (903)
++.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|++ . ++++++.+|+.+ .
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~----------------~~v~~~~~d~~~-~ 248 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N----------------ENLNFVGGDMFK-S 248 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C----------------SSEEEEECCTTT-C
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C----------------CCcEEEeCccCC-C
Confidence 457999999999999999999999899999999 788876653 1 359999999987 3
Q ss_pred cCCCCceeEEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhhcccC---CcEE
Q 043334 110 RDHDIQLERIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIGVIKP---SGIM 186 (903)
Q Consensus 110 ~~~~~~fD~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~~Lkp---gG~l 186 (903)
.+ +||+|+++-..+..+ ......+++++.+.|+| ||++
T Consensus 249 ~~---~~D~v~~~~vlh~~~------------------------------------d~~~~~~l~~~~~~L~p~~~gG~l 289 (358)
T 1zg3_A 249 IP---SADAVLLKWVLHDWN------------------------------------DEQSLKILKNSKEAISHKGKDGKV 289 (358)
T ss_dssp CC---CCSEEEEESCGGGSC------------------------------------HHHHHHHHHHHHHHTGGGGGGCEE
T ss_pred CC---CceEEEEcccccCCC------------------------------------HHHHHHHHHHHHHhCCCCCCCcEE
Confidence 22 599998643222111 11123789999999999 9998
Q ss_pred EEEeC---C-------------------------CCcHHHHHHHHHHCCCeEEEEEe
Q 043334 187 IFNMG---G-------------------------RPGQGVCKRLFERRGFRVDKLWQ 215 (903)
Q Consensus 187 l~~~~---~-------------------------~~~~~~l~~ll~~~gf~~~~~~~ 215 (903)
++... . ......+++++++.||+.++++.
T Consensus 290 ~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 290 IIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp EEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 88321 1 11344567889999999887743
No 499
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.74 E-value=5e-08 Score=104.25 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=74.6
Q ss_pred CeEEEeCCcc---CHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcccccCCCCcchhhhcccCCcEEEEEcccccc
Q 043334 32 KTVAELGCGN---GWITIAIAEKWLPSKVYGLDINPRAIRISWINLYLNALDEKGQPIYDAEKKTLLDRVEFHESDLLAY 108 (903)
Q Consensus 32 ~~VLDlGCGt---G~lsi~la~~~~~~~V~giDis~~al~~A~~n~~~~gl~~~~~~~~~~~~~~~~~~v~~~~gDl~~~ 108 (903)
.+|||||||+ |.....+.+..|+.+|+++|.|+.|++.|++++...+ ..+++++++|+.++
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~----------------~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP----------------EGRTAYVEADMLDP 143 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS----------------SSEEEEEECCTTCH
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC----------------CCcEEEEEecccCh
Confidence 6899999997 3343333445688999999999999999998874322 14799999999886
Q ss_pred cc--CC---CCcee-----EEEECCCCCCCCCccchhhHHhhhhhhhhhhhccccccccccccccccHHHHHHHHHHHhh
Q 043334 109 CR--DH---DIQLE-----RIVGCIPQILNPNPDAMSKIITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGIG 178 (903)
Q Consensus 109 ~~--~~---~~~fD-----~Iv~NpPy~~~~~~~~l~~~~~~~~~~~~~~~l~~~~al~~~v~~~~g~~~~~~~l~~~~~ 178 (903)
.. .. ...|| .|++|--.+. +... .. ...+++++.+
T Consensus 144 ~~~l~~~~~~~~~D~~~p~av~~~avLH~------l~d~--------------------------~~---p~~~l~~l~~ 188 (277)
T 3giw_A 144 ASILDAPELRDTLDLTRPVALTVIAIVHF------VLDE--------------------------DD---AVGIVRRLLE 188 (277)
T ss_dssp HHHHTCHHHHTTCCTTSCCEEEEESCGGG------SCGG--------------------------GC---HHHHHHHHHT
T ss_pred hhhhcccccccccCcCCcchHHhhhhHhc------CCch--------------------------hh---HHHHHHHHHH
Confidence 21 00 11455 4555422221 1100 00 1267999999
Q ss_pred cccCCcEEEEEeCCC
Q 043334 179 VIKPSGIMIFNMGGR 193 (903)
Q Consensus 179 ~LkpgG~ll~~~~~~ 193 (903)
.|+|||+|++.+...
T Consensus 189 ~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 189 PLPSGSYLAMSIGTA 203 (277)
T ss_dssp TSCTTCEEEEEEECC
T ss_pred hCCCCcEEEEEeccC
Confidence 999999999975543
No 500
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.74 E-value=4.2e-07 Score=104.61 Aligned_cols=259 Identities=13% Similarity=0.076 Sum_probs=163.8
Q ss_pred cCCCCCeEEccCC--CCCCC-CcHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhhcCCCCCCCCcEEecCchHHHHHH
Q 043334 611 ETPNSGLIHMDVD--QSFLP-IPSLVKAAIFESFARQNMSESEIDVTPSIQQYIKSNFGFPIDINAEFIYADCSQSLFNK 687 (903)
Q Consensus 611 ~~~~~~~IdLs~g--~p~~~-~p~~v~~al~~al~~y~~~~G~~~lr~ala~~l~~~~G~~~~pe~~I~vt~Gs~~al~~ 687 (903)
...|...||+..| ...++ ..|.+.+++.+.+.......+...+...+++.+.+.+.. .+ .+.++++++++...
T Consensus 83 D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~p~-~~---~v~f~~SGsEA~e~ 158 (454)
T 4ao9_A 83 DADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERFPQ-IE---QLRFTNSGTEANLM 158 (454)
T ss_dssp ETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHSTT-CS---EEEEESSHHHHHHH
T ss_pred ECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhCCC-CC---EEEEeCchHHHHHH
Confidence 4577889998644 44455 578899999998876544444455566777888776542 22 79999988888888
Q ss_pred HHHHhcc--CCCeEEEcCCCcHHHHHHH------HHcCCEEEEecCCCCCCcccCHHHHHHHhhcCC-CcEEEEECCCCC
Q 043334 688 LVLCCIL--EGGTLCFPAGSNGNYVSAA------RFLKANIVNIPTESEVGFKMTEKTLVTILETVK-KPWVYISGPTIN 758 (903)
Q Consensus 688 ll~~l~~--pGD~Vlv~~P~y~~~~~~~------~~~G~~vv~v~~~~~~~f~ld~~~L~~~l~~~~-~~~vil~~P~~N 758 (903)
++..... ..+.|+....+|-.....+ .........+|. -|.+.+++.+.... ..+.+|.-|-+.
T Consensus 159 AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvEPv~g 231 (454)
T 4ao9_A 159 ALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVEPMQG 231 (454)
T ss_dssp HHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEECSEES
T ss_pred HHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEeccccC
Confidence 7765532 2357777777765422111 001122333332 26888888887542 125566667655
Q ss_pred CcccC-CCHHHHHHHHHHHHhCCcEEEEecCCCCCccCCCCCCCCchhhhhhhhccCCCCCCceEEEccCchhcccccce
Q 043334 759 PTGLL-YSNKEIENILTVCAKYGARVVIDTAFSGLEFNYEGWGGWDLEGCLSKLYSSTNSSFNVSLLGGLSLKMLTGALK 837 (903)
Q Consensus 759 PTG~v-~s~eel~eI~~ia~k~~i~VI~DeaY~~l~f~~~~~s~~s~~~~~~~l~~~~~~~~~vI~l~S~SK~~g~~GlR 837 (903)
-.|.+ .+.+.+++|.++|++||+++|.||+..+ -.+.. + ....+.-.| . +-+++|.+| .|+.
T Consensus 232 ~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~---~----a~e~~gv~P-----D--i~t~gK~lg-gG~P 294 (454)
T 4ao9_A 232 ASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPH---G----LANKLGIRS-----D--LTTLGKYIG-GGMS 294 (454)
T ss_dssp TTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTT---C----HHHHHTCCC-----S--EEEEEGGGG-TTSS
T ss_pred CCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccc---c----chhccCCCC-----c--EEEeccccC-CCCc
Confidence 56755 4678899999999999999999999852 11211 1 112222222 2 237889997 7899
Q ss_pred eeEEEeCcHHHHHHHHhC-----C-CCCCCcHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Q 043334 838 FGFLVLNHPQLVDAFSSF-----P-GLSKPHSTVRYAIKKLLGLRERKARDLMNAVAEHIRNLESRSKR 900 (903)
Q Consensus 838 iG~lv~~~~~li~~l~~~-----~-~~~~~s~~~Q~aa~~~L~~~~~~~~~~~~~l~~~r~~y~~Rr~~ 900 (903)
+|.+++..+ +++.+... + .+.+.++.+-.++.+.|+.-.. +++.+.+.++-+.++++.+.
T Consensus 295 iga~~~~~e-i~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~--~~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 295 FGAFGGRAD-VMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT--PEAAGALAERGEALRARLNA 360 (454)
T ss_dssp CEEEEECHH-HHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC--HHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeHHH-HHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc--cChhHHHHHHHHHHHHHHHH
Confidence 999999987 88877532 1 2566678888888888853222 33445555555556555544
Done!