BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043341
(758 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O13775|SYEC_SCHPO Probable glutamate--tRNA ligase, cytoplasmic OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC17A5.15c PE=1
SV=1
Length = 716
Score = 629 bits (1622), Expect = e-179, Method: Compositional matrix adjust.
Identities = 315/655 (48%), Positives = 430/655 (65%), Gaps = 29/655 (4%)
Query: 101 FYGQNAYEAGEIDEWLDYTPVFSSGSEF---ENACTYVDKYLERRTFVVGHSLSIVDIAI 157
F G+N + ++ W++ + F + +D +L R+ VG+SL+ D +I
Sbjct: 79 FIGEN--DRSLVESWVETASALAGNHNFLELSSLLAQLDDHLIMRSLFVGYSLTSADFSI 136
Query: 158 WSALAGTGQRWDSLRKSKKYQNLVRWFNSLSAEYSDSLDEVTATYVSNRGLGKPTAAKSK 217
W AL ++R + +Y NL RW+ ++ DS + V+ T
Sbjct: 137 WGALKSNNMAAGAVR-TGQYFNLARWY-----KFMDSQNAVSVTM--------------- 175
Query: 218 EQQGVKGDVSEKGKAGSRPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFA 277
E+ ++S+K K+ S P++E+ LPDA GKV RF PEPSGYLHIGH+KAALLNQYFA
Sbjct: 176 EEFTKAVNISKKQKS-SGPNYEIGLPDAIDGKVVTRFPPEPSGYLHIGHAKAALLNQYFA 234
Query: 278 QRYQGQLIVRFDDTNPAKESNEFVDNLLKDIETLGIKYETVTYTSDYFPDLMEMAENLIR 337
+Y G+LIVRFDDTNP+KE++EF D +L+D+ LGIK + VTYTSDY + + ++I+
Sbjct: 235 NKYHGKLIVRFDDTNPSKENSEFQDAILEDVALLGIKPDVVTYTSDYLDTIHQYCVDMIK 294
Query: 338 QGKAYVDDTPREQMQKERMDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQ 397
G+AY DDT E M+ ER +GI SK R+ IEE++++ EM GS+ GL+ C+R K+ +
Sbjct: 295 SGQAYADDTDVETMRHERTEGIPSKHRDRPIEESLEILSEMDKGSDVGLKNCIRAKISYE 354
Query: 398 DPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQ 457
+PNK++RDPV YRCN +PHHR G+KY+ YPTYDFACP VD+ EG+THALR++EY DRN
Sbjct: 355 NPNKAMRDPVIYRCNLLPHHRTGTKYRAYPTYDFACPIVDSLEGVTHALRTTEYRDRNPL 414
Query: 458 YYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRG 517
Y + + + +RK+H++EFSR+N V TLLSKRKL V +G V GWDDPRFPTV+G+ RRG
Sbjct: 415 YQWMIKAMNLRKIHVWEFSRMNFVRTLLSKRKLTEIVDHGLVWGWDDPRFPTVRGVRRRG 474
Query: 518 LLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPD 577
+ +EAL Q+I+ QG SKN+ ++W W NKKIIDPV PRHTAV V T+ +GP
Sbjct: 475 MTIEALQQYIVSQGPSKNILTLDWTSFWATNKKIIDPVAPRHTAVESGDVVKATIVNGPA 534
Query: 578 KPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQ 637
P+ PRHKK G K + + I I+ ADAQ +EE+TLMDWGNA V+EI+RD
Sbjct: 535 APYAEDRPRHKKNPELGNKKSIFANEILIEQADAQSFKQDEEVTLMDWGNAYVREINRDA 594
Query: 638 DGNVTQLSGFLHLEGSVKNTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVL 697
G VT L LHL+G K T+ K+TWL +T + + LV FDYLITK KLEEGE++ D L
Sbjct: 595 SGKVTSLKLELHLDGDFKKTEKKVTWLADTEDKTPVDLVDFDYLITKDKLEEGENYKDFL 654
Query: 698 NPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFAIPDGR 752
P T F + D ++NLK+G+I+Q+ERKGY+ DVPF + VLF IPDG+
Sbjct: 655 TPQTEFHSPVFADVGIKNLKKGDIIQVERKGYYIVDVPFDGTQ--AVLFNIPDGK 707
>sp|P46655|SYEC_YEAST Glutamate--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GUS1 PE=1 SV=3
Length = 708
Score = 608 bits (1568), Expect = e-173, Method: Compositional matrix adjust.
Identities = 306/634 (48%), Positives = 424/634 (66%), Gaps = 23/634 (3%)
Query: 121 VFSSGSEFENACTYVDKYLERRTFVVGH-SLSIVDIAIWSALAGTGQRWDSLRKSKKYQN 179
V + ++ + +D L RTF++G S D+A W AL G S+ K+K N
Sbjct: 87 VIKNFAKLSQSLETLDSQLNLRTFILGGLKYSAADVACWGALRSNGM-CGSIIKNKVDVN 145
Query: 180 LVRWFNSLSAEYSDSLDEVTATYVSNRGLGKPTAAKSKEQQGVKGDVSEKGKAGSRPSFE 239
+ RW+ L +D + G +KS + +V +K K + +FE
Sbjct: 146 VSRWYTLLE------MDPIF-------GEAHDFLSKSLLELKKSANVGKK-KETHKANFE 191
Query: 240 VDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPAKESNE 299
+DLPDA++G+V RF PEPSGYLHIGH+KAALLNQYFAQ Y+G+LI+RFDDTNP+KE E
Sbjct: 192 IDLPDAKMGEVVTRFPPEPSGYLHIGHAKAALLNQYFAQAYKGKLIIRFDDTNPSKEKEE 251
Query: 300 FVDNLLKDIETLGIKYETVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQKERMDGI 359
F D++L+D++ LGIK + +TY+SDYF ++ + +I+ GKAY DDTP E+M++ERMDG+
Sbjct: 252 FQDSILEDLDLLGIKGDRITYSSDYFQEMYDYCVQMIKDGKAYCDDTPTEKMREERMDGV 311
Query: 360 ESKCRNNSIEENMKLW-KEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHR 418
S R+ S+EEN++++ +EM G+E GL+ C+R K+D + NK+LRDPV YRCN PHHR
Sbjct: 312 ASARRDRSVEENLRIFTEEMKNGTEEGLKNCVRAKIDYKALNKTLRDPVIYRCNLTPHHR 371
Query: 419 IGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRL 478
GS +K+YPTYDF P VDA EG+THALR+ EY DRNAQY + + L +RKVHI++F+R+
Sbjct: 372 TGSTWKIYPTYDFCVPIVDAIEGVTHALRTIEYRDRNAQYDWMLQALRLRKVHIWDFARI 431
Query: 479 NMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNL 538
N V TLLSKRKL W V V WDDPRFPTV+G+ RRG+ VE L F+L QG S+N+
Sbjct: 432 NFVRTLLSKRKLQWMVDKDLVGNWDDPRFPTVRGVRRRGMTVEGLRNFVLSQGPSRNVIN 491
Query: 539 MEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKAT 598
+EW+ +W NKK+IDP+ PRHTA++ ++ L ++ P +P + + P+HKK GEK
Sbjct: 492 LEWNLIWAFNKKVIDPIAPRHTAIVNPVKIHLEGSEAPQEPKIEMKPKHKKNPAVGEKKV 551
Query: 599 TYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKNTK 658
Y K I +D DA +I+ +EE+TLMDWGN I+ + ++ DG++ L+LEG K TK
Sbjct: 552 IYYKDIVVDKDDADVINVDEEVTLMDWGNVIITK--KNDDGSMV---AKLNLEGDFKKTK 606
Query: 659 LKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKR 718
KLTWL +T ++V + LV FD+LITK +LEE E F D L P T F T AI D N++++K
Sbjct: 607 HKLTWLADTKDVVPVDLVDFDHLITKDRLEEDESFEDFLTPQTEFHTDAIADLNVKDMKI 666
Query: 719 GEILQLERKGYFRCDVPFTRSSKPVVLFAIPDGR 752
G+I+Q ERKGY+R D + KP V F IPDG+
Sbjct: 667 GDIIQFERKGYYRLDA-LPKDGKPYVFFTIPDGK 699
>sp|Q8CGC7|SYEP_MOUSE Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus GN=Eprs
PE=1 SV=4
Length = 1512
Score = 599 bits (1544), Expect = e-170, Method: Compositional matrix adjust.
Identities = 311/726 (42%), Positives = 447/726 (61%), Gaps = 34/726 (4%)
Query: 39 MEIKVLSFPADSPPL-LVIAAAKLAGITIPTETSGSAPTFSFSNGSKLQGTYVLLRYIGR 97
M L+ A +PPL ++A + G + G S +LRY+ R
Sbjct: 1 MAALCLTVNAGNPPLEALLAVEHVKGDVSISVEEGKENLLRVSETVAFTDVNSILRYLAR 60
Query: 98 VGN---FYGQNAYEAGEIDEWLDYTPV-FSSGSEFENACTYVDKYLERRTFVVGHSLSIV 153
+ YG N E EID WL+++ SS +A ++ L RT++VG+SL++
Sbjct: 61 IATTSGLYGTNLMEHTEIDHWLEFSATKLSSCDRLTSAINELNHCLSLRTYLVGNSLTLA 120
Query: 154 DIAIWSALAGTGQRWDSLRKSKKYQNLVRWFNSLSAEYSDSLDEVTATYVSNRGLGKPTA 213
D+ +W+ L G+ + L+++K ++ RWF L A+ + NR T
Sbjct: 121 DLCVWATLKGSAAWQEHLKQNKTLVHVKRWFGFLEAQQAFRSVGTKWDVSGNRA----TV 176
Query: 214 AKSKEQQGVKGDVSEKGKAGSRPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLN 273
A K+Q DV GK V+LP AE+GKV +RF PE SGYLHIGH+KAALLN
Sbjct: 177 APDKKQ-----DV---GKF-------VELPGAEMGKVTVRFPPEASGYLHIGHAKAALLN 221
Query: 274 QYFAQRYQGQLIVRFDDTNPAKESNEFVDNLLKDIETLGIKYETVTYTSDYFPDLMEMAE 333
Q++ ++G+LI+RFDDTNP KE +F +L+D+ L IK + TYTSD+F +M+ AE
Sbjct: 222 QHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLHIKPDQFTYTSDHFETIMKYAE 281
Query: 334 NLIRQGKAYVDDTPREQMQKERMDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGK 393
LI++GKAYVDDTP EQM+ ER ESK R NS+E+N+++W+EM GS+ G CCLR K
Sbjct: 282 KLIQEGKAYVDDTPAEQMKAEREQRTESKHRKNSVEKNLQMWEEMKKGSQFGQSCCLRAK 341
Query: 394 LDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHD 453
+DM N +RDP YRC PH R G+KY VYPTYDFACP VD+ EG+THALR++EYHD
Sbjct: 342 IDMSSNNGCMRDPTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHD 401
Query: 454 RNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGI 513
R+ Q+Y I E LG+RK +I+E+SRLN+ T+LSKRKL WFV G VDGWDDPRFPTV+G+
Sbjct: 402 RDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGWDDPRFPTVRGV 461
Query: 514 VRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLT 573
+RRG+ VE L QFI QG+S+++ MEWDK+W NKK+IDPV PR+ A+++ V + +
Sbjct: 462 LRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYVALLKKEVVPVNVL 521
Query: 574 DGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEI 633
D ++ ++ + RH K G K Y+ +++I+ ADA+ S E +T ++WGN + +I
Sbjct: 522 DAQEE--MKEVARHPKNPDVGLKPVWYSPKVFIEGADAETFSEGEMVTFINWGNINITKI 579
Query: 634 SRDQDGNVTQLSGFLHLEGSVKNTKLKLTWLPETNELVNL--TLVGFDYLITKKKLEEGE 691
++ DG +T L L+LE K+TWL E+ +++ V +++LITK L + E
Sbjct: 580 HKNADGKITSLDAKLNLENKDYKKTTKITWLAESTHALSIPAVCVTYEHLITKPVLGKDE 639
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSS------KPVVL 745
DF +N ++ E +GD +++LK+G+I+QL+R+G+F CD P+ S P +L
Sbjct: 640 DFKQYINKDSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCREAPCIL 699
Query: 746 FAIPDG 751
IPDG
Sbjct: 700 IYIPDG 705
>sp|P07814|SYEP_HUMAN Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens GN=EPRS
PE=1 SV=5
Length = 1512
Score = 590 bits (1520), Expect = e-167, Method: Compositional matrix adjust.
Identities = 308/728 (42%), Positives = 442/728 (60%), Gaps = 48/728 (6%)
Query: 44 LSFPADSPPLLVIAAAKLA--GITIPTETSGSAPTFSFSNGSKLQGTYVLLRYIGRVGN- 100
L+ + PPL + A + ++I E G S +LRY+ RV
Sbjct: 6 LTVNSGDPPLGALLAVEHVKDDVSISVE-EGKENILHVSENVIFTDVNSILRYLARVATT 64
Query: 101 --FYGQNAYEAGEIDEWLDYTPV-FSSGSEFENACTYVDKYLERRTFVVGHSLSIVDIAI 157
YG N E EID WL+++ SS F + ++ L RT++VG+SLS+ D+ +
Sbjct: 65 AGLYGSNLMEHTEIDHWLEFSATKLSSCDSFTSTINELNHCLSLRTYLVGNSLSLADLCV 124
Query: 158 WSALAGTGQRWDSLRKSKKYQNLVRWFNSLSAEYSDSLDEVTATYVSNRGLGKPTAAKSK 217
W+ L G + L++ K ++ RWF L A+ ++
Sbjct: 125 WATLKGNAAWQEQLKQKKAPVHVKRWFGFLEAQ------------------------QAF 160
Query: 218 EQQGVKGDVSEKGKAGSRPSFE------VDLPDAEIGKVRLRFAPEPSGYLHIGHSKAAL 271
+ G K DVS KA P + V+LP AE+GKV +RF PE SGYLHIGH+KAAL
Sbjct: 161 QSVGTKWDVS-TTKARVAPEKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAAL 219
Query: 272 LNQYFAQRYQGQLIVRFDDTNPAKESNEFVDNLLKDIETLGIKYETVTYTSDYFPDLMEM 331
LNQ++ ++G+LI+RFDDTNP KE +F +L+D+ L IK + TYTSD+F +M+
Sbjct: 220 LNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLHIKPDQFTYTSDHFETIMKY 279
Query: 332 AENLIRQGKAYVDDTPREQMQKERMDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLR 391
AE LI++GKAYVDDTP EQM+ ER I+SK R N IE+N+++W+EM GS+ G CCLR
Sbjct: 280 AEKLIQEGKAYVDDTPAEQMKAEREQRIDSKHRKNPIEKNLQMWEEMKKGSQFGQSCCLR 339
Query: 392 GKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEY 451
K+DM N +RDP YRC PH R G+KY VYPTYDFACP VD+ EG+THALR++EY
Sbjct: 340 AKIDMSSNNGCMRDPTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEY 399
Query: 452 HDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQ 511
HDR+ Q+Y I E LG+RK +I+E+SRLN+ T+LSKRKL WFV G VDGWDDPRFPTV+
Sbjct: 400 HDRDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGWDDPRFPTVR 459
Query: 512 GIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLT 571
G++RRG+ VE L QFI QG+S+++ MEWDK+W NKK+IDPV PR+ A+++ + +
Sbjct: 460 GVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYVALLKKEVIPVN 519
Query: 572 LTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVK 631
+ + ++ ++ + +H K G K Y+ +++I+ ADA+ S E +T ++WGN +
Sbjct: 520 VPEAQEE--MKEVAKHPKNPEVGLKPVWYSPKVFIEGADAETFSEGEMVTFINWGNLNIT 577
Query: 632 EISRDQDGNVTQLSGFLHLEGSVKNTKLKLTWLPETNEL--VNLTLVGFDYLITKKKLEE 689
+I ++ DG + L L+LE K+TWL ET + + V +++LITK L +
Sbjct: 578 KIHKNADGKIISLDAKLNLENKDYKKTTKVTWLAETTHALPIPVICVTYEHLITKPVLGK 637
Query: 690 GEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSS------KPV 743
EDF +N ++ E +GD +++LK+G+I+QL+R+G+F CD P+ S P
Sbjct: 638 DEDFKQYVNKNSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCKEAPC 697
Query: 744 VLFAIPDG 751
VL IPDG
Sbjct: 698 VLIYIPDG 705
>sp|P28668|SYEP_DROME Bifunctional glutamate/proline--tRNA ligase OS=Drosophila
melanogaster GN=Aats-glupro PE=1 SV=2
Length = 1714
Score = 584 bits (1506), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/736 (42%), Positives = 454/736 (61%), Gaps = 37/736 (5%)
Query: 39 MEIKVLSFPADSPPLLVIAAAKLAGITIPTET--SGSAPTFSFSNGSKL--QGTYVLLRY 94
M IK L ++PP+ +A A L T+P E S + F + L +LR
Sbjct: 1 MSIK-LKANLNNPPISGLATAHLINGTVPVEIVWSKEETSLQFPDNRLLVCHSNNDVLRA 59
Query: 95 IGRVG---NFYGQNAYEAGEIDEWLDYTPVFSSGSEFENACTYVDKYLERRTFVVGHSLS 151
+ R YG+ A E +ID WL ++ + + A +++DK + T++V + L+
Sbjct: 60 LARAAPDYKLYGETAIERTQIDHWLSFS--LTCEDDISWALSFLDKSIAPVTYLVANKLT 117
Query: 152 IVDIAIWSALAGTGQRWDSLRKSKKYQNLVRWFNSLSAEYSDSLDEVTATYVSNRGLGKP 211
I D A+++ + R++ L Q++ RW++ ++A+ L + + K
Sbjct: 118 IADFALFNEMHS---RYEFLAAKGIPQHVQRWYDLITAQ---PLIQKVLQSLPEDAKVKR 171
Query: 212 TAAKSKEQQGVK-GDVSEKGKAGSRPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAA 270
+ SKEQ K G+ ++GK VDLP AE+GKV +RF PE SGYLHIGH+KAA
Sbjct: 172 SPQSSKEQTPAKTGERKQEGKF-------VDLPGAEMGKVVVRFPPEASGYLHIGHAKAA 224
Query: 271 LLNQYFAQRYQGQLIVRFDDTNPAKESNEFVDNLLKDIETLGIKYETVTYTSDYFPDLME 330
LLNQY+A +QG LI+RFDDTNPAKE+ EF + +L D+E L IK + T+TS+YF +++
Sbjct: 225 LLNQYYALAFQGTLIMRFDDTNPAKETVEFENVILGDLEQLQIKPDVFTHTSNYFDLMLD 284
Query: 331 MAENLIRQGKAYVDDTPREQMQKERMDGIESKCRNNSIEENMKLWKEMIAGSERGLECCL 390
LI++ KAYVDDTP EQM+ ER +ES R+NS+E+N+ LW+EM+ GSE+G + C+
Sbjct: 285 YCVRLIKESKAYVDDTPPEQMKLEREQRVESANRSNSVEKNLSLWEEMVKGSEKGQKYCV 344
Query: 391 RGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSE 450
R K+DM PN +RDP YRC PH R G+KYKVYPTYDFACP VDA E +TH LR++E
Sbjct: 345 RAKIDMSSPNGCMRDPTIYRCKNEPHPRTGTKYKVYPTYDFACPIVDAIENVTHTLRTTE 404
Query: 451 YHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTV 510
YHDR+ Q+Y + L +RK +I+ +SRLNM T+LSKRKL WFV +G VDGWDDPRFPTV
Sbjct: 405 YHDRDDQFYWFIDALKLRKPYIWSYSRLNMTNTVLSKRKLTWFVDSGLVDGWDDPRFPTV 464
Query: 511 QGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLL 570
+GI+RRG+ VE L +FI+ QG+SK++ M WDK+W NKK+IDP+ PR+TA+ +++RV++
Sbjct: 465 RGIIRRGMTVEGLKEFIIAQGSSKSVVFMNWDKIWAFNKKVIDPIAPRYTALEKEKRVIV 524
Query: 571 TLTDGPDKPFVRI-IPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI 629
+ RI + H K E G+K RI+ID+ DA+ + E T ++WGN +
Sbjct: 525 NVAGA---KVERIQVSVHPKDESLGKKTVLLGPRIYIDYVDAEALKEGENATFINWGNIL 581
Query: 630 VKEISRDQDGNVTQLSGFLHLEGSVKNTKLKLTWLP---ETNELVNLTLVGFDYLITKKK 686
++++++D GN+T + L+LE LKLTWL + + V FD +I+K
Sbjct: 582 IRKVNKDASGNITSVDAALNLENKDFKKTLKLTWLAVEDDPSAYPPTFCVYFDNIISKAV 641
Query: 687 LEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVP------FTRSS 740
L + EDF + TR E +GD ++ K+G+I+QL+R+G+F+ DV +T
Sbjct: 642 LGKDEDFKQFIGHKTRDEVPMLGDPELKKCKKGDIIQLQRRGFFKVDVAYAPPSGYTNVP 701
Query: 741 KPVVLFAIPDGRQQAV 756
P+VLF+IPDG + V
Sbjct: 702 SPIVLFSIPDGHTKDV 717
>sp|Q54KB8|SYEC_DICDI Probable glutamate--tRNA ligase, cytoplasmic OS=Dictyostelium
discoideum GN=gluS PE=2 SV=1
Length = 764
Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust.
Identities = 298/717 (41%), Positives = 438/717 (61%), Gaps = 21/717 (2%)
Query: 48 ADSPPLLVIAAAKLAGITIPTETSGSAPTFSF-SNGSKLQGTYVLLRYIGRVG---NFYG 103
A P + +I + + G+ I + FS L+G+YV+ +Y+ R + YG
Sbjct: 19 ATFPLVAIITSKVVGGVKIVGRKGLDSTEFSIVGTQDSLKGSYVIAKYLARTTPSLSLYG 78
Query: 104 QNAYEAGEIDEWLDYTPVFSSGSEFENACTYVDKYLERRTFVVGHSLSIVDIAIWSALAG 163
+NA A +IDE++D S +F +++YL R F++G +L++ DI +++ +
Sbjct: 79 ENALSASKIDEFIDKFAHLKS-EKFNEFLKEMNEYLTLRAFLIGFNLTLADIVLFARIKM 137
Query: 164 TGQRWDSLRK-SKKYQNLVRWFNSLS-----AEYSDSLDEVTATYVSNRGLGKPTAAKSK 217
+ + + K K +L RW+ LS E ++ + T S + + TAA ++
Sbjct: 138 VKEIQEEINKLGKTIPHLNRWYGYLSQLESFVEADNAFNGKKETKASGKAGAEGTAATTE 197
Query: 218 EQQGVKGDVSEKGKAGSRPSFE-VDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYF 276
+ +KG G +FE ++LP GKV RF PEPSGY+HIGH KAA++N Y+
Sbjct: 198 KV------APQKGAMGWVGNFEALNLPGLVEGKVVTRFPPEPSGYMHIGHCKAAIINNYY 251
Query: 277 AQRYQGQLIVRFDDTNPAKESNEFVDNLLKDIETLGIKYETVTYTSDYFPDLMEMAENLI 336
A++Y G++I+RFDDTNP+KE E+V+N++KDI LGIKYE +T+TSDYF + + A +I
Sbjct: 252 AEKYNGKIIIRFDDTNPSKEKEEYVENIIKDINNLGIKYEKITHTSDYFDLIHDYAIQMI 311
Query: 337 RQGKAYVDDTPREQMQKERMDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDM 396
++G AY DDTP+ +M +ER + IES RNNS+E+N++++ EM +E+G++C LR KLDM
Sbjct: 312 KEGIAYCDDTPQVKMSEERDNAIESVHRNNSVEKNLEMFDEMKKATEQGVKCVLRAKLDM 371
Query: 397 QDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNA 456
+K+ RDP YRCN PHHR G KYKVYP YDFACP VD+ EGITHALRS+EY+++
Sbjct: 372 AHIDKAFRDPAIYRCNSTPHHRTGDKYKVYPLYDFACPIVDSVEGITHALRSNEYNNKRN 431
Query: 457 QYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVR 515
Y E L + K +I ++SRL+ LLSKRKL FV G V GW DPR PT+QGI R
Sbjct: 432 LYNHYLEILHLENKPYISDYSRLSFFNVLLSKRKLQHFVDTGLVSGWTDPRLPTLQGITR 491
Query: 516 RGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDG 575
RGL V AL +FIL QGAS ++ KL+ NK +++P CPR+TA+ + V TL++G
Sbjct: 492 RGLTVAALKEFILSQGASAANTTLDLGKLFVGNKAVLEPTCPRYTAIAKATAVKFTLSNG 551
Query: 576 PDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISR 635
P P V+ ++ K G K T++ + ++ D I EE+TLM+WGNAIV+ + R
Sbjct: 552 PTLPEVKDCLKYAKDPSMGTKKVTFSNNLLLEGDDCNQIKEGEEVTLMNWGNAIVETLQR 611
Query: 636 DQDGNVTQLSGFLHLEGSVKNTKLKLTWL-PETNELVNLTLVGFDYLITKKKLEEGEDFL 694
+++G+V ++G LHLEG VK T KL+WL + + V + L +DY+ITK KLE+G+D
Sbjct: 612 NENGDVVSMTGKLHLEGDVKKTDKKLSWLSSDCADTVTVVLQDYDYIITKPKLEDGDDLD 671
Query: 695 DVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFAIPDG 751
N ++FE A D N+ LK + +Q ER+G+F D KP +L IP G
Sbjct: 672 TFTNKNSKFEIEAFTDENILTLKLNDKIQFERRGFFNVD-QVGDGVKPYILIYIPSG 727
>sp|Q8SSE4|SYEC_ENCCU Probable glutamate--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU02_1210 PE=3 SV=1
Length = 642
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/559 (41%), Positives = 341/559 (61%), Gaps = 35/559 (6%)
Query: 191 YSDSLDEVTATYVSNRGLGKPTAAKSKEQQGVKGDVSEKGKAGSRPSFEVDLPDAEIGKV 250
+ D+ + + +N+ L K A S+++QG + E+ P V
Sbjct: 108 FPDTCKMYSEQFKANKPLLKEFNAGSRKEQG---------------NLEIGEPSE---NV 149
Query: 251 RLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPAKESNEFVDNLLKDIET 310
RF PEP+G LHIGH++AALLN YFA + G+L+VRFDDTNP KE F +L D+
Sbjct: 150 VTRFPPEPNGRLHIGHARAALLNWYFASKGNGRLLVRFDDTNPEKEEERFERGILSDLSL 209
Query: 311 LGIKYETVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQKERMDGIESKCRNNSIEE 370
LGI T+++TSDYF ++++ LI +GKAY D+TP+E M+ ER G+ES+CR+ +EE
Sbjct: 210 LGINEYTLSHTSDYFDKIIDLGVFLIGEGKAYADNTPQEVMRDERGRGVESRCRSMDVEE 269
Query: 371 NMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYD 430
+ +++KEM G+ G CLR K+DM NK++RDPV +R N PHHR G KYKVYPTYD
Sbjct: 270 SKRIFKEMARGNASGY--CLRAKIDMSSSNKAMRDPVIFRVNESPHHRTGDKYKVYPTYD 327
Query: 431 FACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRK 489
FACP VD+ EGIT +LR++EY DRN QYY ++L +R + I++FSRLN T+LSKRK
Sbjct: 328 FACPIVDSLEGITLSLRANEYRDRNQQYYWFIDNLRLRNRPKIHDFSRLNFENTVLSKRK 387
Query: 490 LLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINK 549
L ++V NG V GWDDPR T+ GI R G+ +EAL ++IL QG S+ + WDK+W IN+
Sbjct: 388 LKYYVDNGFVSGWDDPRLATIAGIKRLGMNMEALREYILMQGVSQKTCTISWDKVWAINR 447
Query: 550 KIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHA 609
K IDPV R+ V + V +++ + + + +P+HKK G K Y+ +I +
Sbjct: 448 KKIDPVSARYFCVQQRDAVEVSIDNTSE--YTMDVPKHKKNGDLGTKEVFYSSQILLSQE 505
Query: 610 DAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKNTKLKLTWLPETNE 669
D +++ NEE TLM+WGNAIVK + ++G VT++ L+ +G K TK K++W+ +
Sbjct: 506 DGRVLQDNEEFTLMNWGNAIVKSKTV-ENGTVTKMEVSLNPDGDFKLTKNKMSWVSKRGS 564
Query: 670 LVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGY 729
V + L + L+ E+ ED N + + +S + N++ GE++Q ER G+
Sbjct: 565 -VTVELAEYGNLMND---EDTEDLALRFNRNSVKKEYWYAESAIINVREGEVIQFERNGF 620
Query: 730 FRCD-------VPFTRSSK 741
+ CD +PFT+ +
Sbjct: 621 YYCDGFLVFNLLPFTKQKR 639
>sp|C4VBI7|SYEC_NOSCE Probable glutamate--tRNA ligase, cytoplasmic OS=Nosema ceranae
(strain BRL01) GN=NCER_102160 PE=3 SV=1
Length = 614
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/498 (41%), Positives = 302/498 (60%), Gaps = 24/498 (4%)
Query: 253 RFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPAKESNEFVDNLLKDIETLG 312
RFAPEPSG LHIGH KA L+N A++ G L++RFDDTNP K ++ +L+D++TLG
Sbjct: 130 RFAPEPSGCLHIGHLKALLVNYNLAEKSNGTLLLRFDDTNPVKNYEKYEKEILRDLDTLG 189
Query: 313 IKYETVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQKERMDGIESKCRNNSIEENM 372
I ++++SDYF L++ A +LI + AYVD+T +E M+ ER +GIESK RN + E++
Sbjct: 190 ITGLKISHSSDYFELLVDEAVSLINKNLAYVDNTDQETMRIERFEGIESKMRNINNSESL 249
Query: 373 KLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFA 432
K++KE++ G G CLR K+DM +PNKS+RDPV YR + H R YK +PTYDF
Sbjct: 250 KIFKELLQGRAPGY--CLRAKIDMSNPNKSMRDPVIYRASDKMHGRC-KLYKAFPTYDFV 306
Query: 433 CPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLL 491
CP VD+ EG+T R++EY DRN QY E+L + K +FS+LN+ T+LSKRK+
Sbjct: 307 CPIVDSIEGVTVVCRANEYKDRNEQYKWFLENLELENKPEFNDFSKLNLEDTVLSKRKID 366
Query: 492 WFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKI 551
+ + V GWDDPR T+QGI R G+ + AL +I QGAS N++ WDK+W +NKK+
Sbjct: 367 KLISDSLVTGWDDPRLATIQGIKRLGMHMTALKDYINLQGASNKTNVISWDKIWAMNKKV 426
Query: 552 IDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADA 611
IDP+ PR AV + V + +T+ + + IP +KK G K ++ + D
Sbjct: 427 IDPLSPRFMAVEKINCVRVFITNFEGLKYTKNIPLNKKNTSLGSKDVLFSDTLLFSQEDG 486
Query: 612 QLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKNTKLKLTWLPETNELV 671
++ NEE TLM+WGNAIV E ++ VT+L LHLEG K+T K++W+ E+
Sbjct: 487 FVLKENEEFTLMNWGNAIV-EKKVVENSIVTELYIKLHLEGDYKSTTNKISWVSESGA-- 543
Query: 672 NLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRG-EILQLERKGYF 730
+T G +Y KL E+F N ++ + +S++ NL + +Q ER G+F
Sbjct: 544 -VTATGIEY----GKLLVNEEF----NINSKIDKQYYVESSITNLSTDMKHVQFERIGFF 594
Query: 731 RCD-------VPFTRSSK 741
CD VPFT+ +
Sbjct: 595 YCDSPCVFHLVPFTKQKR 612
>sp|A9CSZ1|SYEC_ENTBH Probable glutamate--tRNA ligase, cytoplasmic OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_22577 PE=3 SV=1
Length = 631
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/511 (40%), Positives = 311/511 (60%), Gaps = 20/511 (3%)
Query: 248 GKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPAKESNEFVDNLLKD 307
G V RF PEPSG+LHIGH KAALLN A+ G+L++RFDDTNP KE + + +++D
Sbjct: 134 GNVVTRFPPEPSGFLHIGHIKAALLNDLMAK--NGKLLIRFDDTNPIKEEKMYENVIIED 191
Query: 308 IETLGIKYETVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQKERMDGIESKCRNNS 367
+ TLGIK T+ +SD+F L A LI+ G AY D+T + QM++ER GI SK RN
Sbjct: 192 LHTLGIKNYTIVRSSDHFDSLYNYAIQLIQLGLAYCDNTDQLQMREERTKGIPSKNRNTD 251
Query: 368 IEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYP 427
IE N+ ++ +M +G+ L+ CLR K+D + NK+LRDPV YR H+ +KYK+YP
Sbjct: 252 IETNLSIFSKMSSGN--CLDYCLRAKIDYTNLNKALRDPVIYRHIEKEHNITKNKYKIYP 309
Query: 428 TYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGV-RKVHIYEFSRLNMVYTLLS 486
TYDFACP +D+ +G+T ALR++EY DRN QYY E L + K IY+FSRLN T+LS
Sbjct: 310 TYDFACPIIDSLDGVTLALRTNEYRDRNEQYYWFLEKLNLPNKPKIYDFSRLNFENTVLS 369
Query: 487 KRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWT 546
KR++ ++V N V GWDDPR T++GI+R G+ ++ L ++I+ QG+S+ +++ WDK+W+
Sbjct: 370 KRQMKFYVDNHFVSGWDDPRLSTLRGILRLGMDIDTLKEYIINQGSSQKSSVISWDKVWS 429
Query: 547 INKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFV---RIIPRHKKYEGAGEKATTYTKR 603
+NKK ID R++A+ + V + D + + IP+ KK G K +
Sbjct: 430 LNKKNIDHKSARYSAIPKLYCVECLILDKNNNEIITKTEDIPKFKKNLSLGNKTIIKSSH 489
Query: 604 IWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKNTKLKLTW 663
I I DA +++ NEE TLM+WGN VKE + +G + ++ +L G VK TK KLTW
Sbjct: 490 ILISQEDANILNNNEEFTLMNWGNMKVKE-KQIVNGIIIKIILEENLAGDVKTTKNKLTW 548
Query: 664 LPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQ 723
+ + N ++ ++ +D L K ++ + N ++ E +G+ + ++ +Q
Sbjct: 549 VNKEN-IIEFKILEYDTLQNDK---NTDNLAEKFNTNSKKEEIWLGEKALISVSPKTYIQ 604
Query: 724 LERKGYFRCDVPFTRSSKPVVLFAIPDGRQQ 754
+ER G+F CD KP+ IP +Q+
Sbjct: 605 IERIGFFICD-------KPLEFILIPYTKQK 628
>sp|A4W846|SYQ_ENT38 Glutamine--tRNA ligase OS=Enterobacter sp. (strain 638) GN=glnS
PE=3 SV=1
Length = 555
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 290/542 (53%), Gaps = 34/542 (6%)
Query: 231 KAGSRPS------FEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQL 284
+A +RPS + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ
Sbjct: 3 EAEARPSNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQC 62
Query: 285 IVRFDDTNPAKESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYV 343
+RFDDTNP KE E+V+++ D++ LG + + Y+SDYF L A LI +G AYV
Sbjct: 63 NLRFDDTNPVKEDIEYVESIKNDVQWLGFNWSGDICYSSDYFDQLFAYAVELINKGLAYV 122
Query: 344 DDTPREQMQKER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDP 399
D+ +++++ R G S R+ S+EEN+ L+++M AG + CLR K+DM P
Sbjct: 123 DELSADEIREYRGSLTAPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASP 182
Query: 400 NKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYY 459
+RDPV YR HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y
Sbjct: 183 FIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYD 242
Query: 460 RIQEDLGVRKVH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRG 517
+ +++ + VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG
Sbjct: 243 WVLDNITI-PVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRG 301
Query: 518 LLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPD 577
++ +FI G +K N +E L + ++ ++ PR AVI+ ++++ +
Sbjct: 302 YSASSIREFIKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGE 361
Query: 578 KPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV- 630
V +P H G + ++ IWID AD + AN++ + G NA V
Sbjct: 362 SELV-TMPNHPSKPEMGSREVPFSAEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVI 419
Query: 631 --KEISRDQDGNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYL 681
+ + +D +GN+T + E K+ K + W+ + L V + L +D L
Sbjct: 420 KAERVEKDTEGNITTIFCSYDAETLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRL 477
Query: 682 ITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSK 741
+ EDFL +NP + + +++N + G+ Q ER+GYF D + ++K
Sbjct: 478 FSVPNPGAAEDFLATINPESLLIKQGYAEPSLKNAETGKAYQFEREGYFCLDSRYATATK 537
Query: 742 PV 743
V
Sbjct: 538 LV 539
>sp|Q83LY4|SYQ_SHIFL Glutamine--tRNA ligase OS=Shigella flexneri GN=glnS PE=3 SV=1
Length = 554
Score = 297 bits (760), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHITVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|Q0T6S8|SYQ_SHIF8 Glutamine--tRNA ligase OS=Shigella flexneri serotype 5b (strain
8401) GN=glnS PE=3 SV=1
Length = 554
Score = 297 bits (760), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHITVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B2TU51|SYQ_SHIB3 Glutamine--tRNA ligase OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-S 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|Q1REN7|SYQ_ECOUT Glutamine--tRNA ligase OS=Escherichia coli (strain UTI89 / UPEC)
GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|Q8FJW4|SYQ_ECOL6 Glutamine--tRNA ligase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=glnS PE=3 SV=3
Length = 554
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|Q0TK03|SYQ_ECOL5 Glutamine--tRNA ligase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|A1A8U7|SYQ_ECOK1 Glutamine--tRNA ligase OS=Escherichia coli O1:K1 / APEC GN=glnS
PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B7MPI5|SYQ_ECO81 Glutamine--tRNA ligase OS=Escherichia coli O81 (strain ED1a)
GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B7MFU7|SYQ_ECO45 Glutamine--tRNA ligase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B7UKW1|SYQ_ECO27 Glutamine--tRNA ligase OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|Q3Z4C0|SYQ_SHISS Glutamine--tRNA ligase OS=Shigella sonnei (strain Ss046) GN=glnS
PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B6HYN9|SYQ_ECOSE Glutamine--tRNA ligase OS=Escherichia coli (strain SE11) GN=glnS
PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|P00962|SYQ_ECOLI Glutamine--tRNA ligase OS=Escherichia coli (strain K12) GN=glnS
PE=1 SV=3
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B1IY48|SYQ_ECOLC Glutamine--tRNA ligase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|A7ZXU0|SYQ_ECOHS Glutamine--tRNA ligase OS=Escherichia coli O9:H4 (strain HS)
GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B1X6L3|SYQ_ECODH Glutamine--tRNA ligase OS=Escherichia coli (strain K12 / DH10B)
GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|C4ZWF6|SYQ_ECOBW Glutamine--tRNA ligase OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B7M5J8|SYQ_ECO8A Glutamine--tRNA ligase OS=Escherichia coli O8 (strain IAI1) GN=glnS
PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B7L9L7|SYQ_ECO55 Glutamine--tRNA ligase OS=Escherichia coli (strain 55989 / EAEC)
GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|A7ZJ63|SYQ_ECO24 Glutamine--tRNA ligase OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=glnS PE=3 SV=1
Length = 554
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|Q32IQ0|SYQ_SHIDS Glutamine--tRNA ligase OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=glnS PE=3 SV=1
Length = 554
Score = 295 bits (756), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTKPGKNSPYRDRSVEENLPLFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|Q324M4|SYQ_SHIBS Glutamine--tRNA ligase OS=Shigella boydii serotype 4 (strain Sb227)
GN=glnS PE=3 SV=1
Length = 554
Score = 295 bits (755), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M AG + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G ++ N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTRQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSSEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B4TQ00|SYQ_SALSV Glutamine--tRNA ligase OS=Salmonella schwarzengrund (strain
CVM19633) GN=glnS PE=3 SV=1
Length = 555
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGTKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|Q57RP8|SYQ_SALCH Glutamine--tRNA ligase OS=Salmonella choleraesuis (strain SC-B67)
GN=glnS PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGTAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSCYATADKLV 539
>sp|Q8ZQX5|SYQ_SALTY Glutamine--tRNA ligase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=glnS PE=3 SV=3
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|B5BCC3|SYQ_SALPK Glutamine--tRNA ligase OS=Salmonella paratyphi A (strain AKU_12601)
GN=glnS PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|C0PWA7|SYQ_SALPC Glutamine--tRNA ligase OS=Salmonella paratyphi C (strain RKS4594)
GN=glnS PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|Q5PCH8|SYQ_SALPA Glutamine--tRNA ligase OS=Salmonella paratyphi A (strain ATCC 9150
/ SARB42) GN=glnS PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|B4TB84|SYQ_SALHS Glutamine--tRNA ligase OS=Salmonella heidelberg (strain SL476)
GN=glnS PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|B5R651|SYQ_SALG2 Glutamine--tRNA ligase OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=glnS PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|B5QWD0|SYQ_SALEP Glutamine--tRNA ligase OS=Salmonella enteritidis PT4 (strain
P125109) GN=glnS PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|B5FNC1|SYQ_SALDC Glutamine--tRNA ligase OS=Salmonella dublin (strain CT_02021853)
GN=glnS PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|B5EZC3|SYQ_SALA4 Glutamine--tRNA ligase OS=Salmonella agona (strain SL483) GN=glnS
PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|B5YQM4|SYQ_ECO5E Glutamine--tRNA ligase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=glnS PE=3 SV=1
Length = 554
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID +D + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRSDFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|Q8X9H8|SYQ_ECO57 Glutamine--tRNA ligase OS=Escherichia coli O157:H7 GN=glnS PE=3
SV=3
Length = 554
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID +D + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRSDFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|Q8Z8F8|SYQ_SALTI Glutamine--tRNA ligase OS=Salmonella typhi GN=glnS PE=3 SV=3
Length = 555
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGTKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSVAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|B4SYN9|SYQ_SALNS Glutamine--tRNA ligase OS=Salmonella newport (strain SL254) GN=glnS
PE=3 SV=1
Length = 555
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 281/531 (52%), Gaps = 26/531 (4%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ YQGQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+VD++ D+E LG + + Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ + V +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNH 370
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 371 PNKPEMGSREVPFSGEIWIDRADFRE-EANKQYKRLVMGKEVRLRNAYVIKAERVEKDAE 429
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGED 692
GN+T + + K+ K + W+ + L + + +D L + ED
Sbjct: 430 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHAL-PIEIRLYDRLFSVPNPGAAED 488
Query: 693 FLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
FL V+NP + G+ +++ G+ Q ER+GYF D + + K V
Sbjct: 489 FLSVINPESLVIKRGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLV 539
>sp|B7LKT3|SYQ_ESCF3 Glutamine--tRNA ligase OS=Escherichia fergusonii (strain ATCC 35469
/ DSM 13698 / CDC 0568-73) GN=glnS PE=3 SV=1
Length = 554
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B1LLC4|SYQ_ECOSM Glutamine--tRNA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=glnS PE=3 SV=1
Length = 554
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
>sp|B7N9S6|SYQ_ECOLU Glutamine--tRNA ligase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 284/532 (53%), Gaps = 29/532 (5%)
Query: 235 RPSFEVDLPDAEIGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGQLIVRFDDTNPA 294
R + DL + V RF PEP+GYLHIGH+K+ LN AQ Y+GQ +RFDDTNP
Sbjct: 13 RQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV 72
Query: 295 KESNEFVDNLLKDIETLGIKYE-TVTYTSDYFPDLMEMAENLIRQGKAYVDDTPREQMQK 353
KE E+V+++ D+E LG + V Y+SDYF L A LI +G AYVD+ EQ+++
Sbjct: 73 KEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 132
Query: 354 ER----MDGIESKCRNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYY 409
R G S R+ S+EEN+ L+++M G + CLR K+DM P +RDPV Y
Sbjct: 133 YRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLY 192
Query: 410 RCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK 469
R HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ +
Sbjct: 193 RIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-P 251
Query: 470 VH--IYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFI 527
VH YEFSRLN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 528 LEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRH 587
G +K N +E L + ++ ++ PR AVI+ ++++ G + + +P H
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNH 369
Query: 588 KKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWG------NAIV---KEISRDQD 638
G + ++ IWID AD + AN++ + G NA V + + +D +
Sbjct: 370 PNKPEMGSRQVPFSGEIWIDRADFRE-EANKQYKRLVLGKEVRLRNAYVIKAERVEKDAE 428
Query: 639 GNVTQLSGFLHLEGSVKN------TKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEEGE 691
GN+T + + K+ K + W+ + L V + L +D L + +
Sbjct: 429 GNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRL--YDRLFSVPNPGAAD 486
Query: 692 DFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPV 743
DFL V+NP + + ++++ G+ Q ER+GYF D + + KPV
Sbjct: 487 DFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 289,581,801
Number of Sequences: 539616
Number of extensions: 12753752
Number of successful extensions: 34604
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 31573
Number of HSP's gapped (non-prelim): 1577
length of query: 758
length of database: 191,569,459
effective HSP length: 125
effective length of query: 633
effective length of database: 124,117,459
effective search space: 78566351547
effective search space used: 78566351547
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)