Query 043342
Match_columns 363
No_of_seqs 497 out of 2464
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 04:05:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043342.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043342hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.9 1.7E-27 3.6E-32 200.9 7.0 177 175-352 35-215 (226)
2 KOG4412 26S proteasome regulat 99.9 9.2E-27 2E-31 196.5 8.7 165 187-351 13-183 (226)
3 PHA02859 ankyrin repeat protei 99.9 7.1E-23 1.5E-27 184.3 14.2 176 172-351 15-202 (209)
4 PHA02791 ankyrin-like protein; 99.9 4.7E-23 1E-27 193.2 13.4 172 175-351 27-204 (284)
5 PHA02875 ankyrin repeat protei 99.9 1.8E-22 3.9E-27 199.5 13.6 177 174-351 31-212 (413)
6 PHA02878 ankyrin repeat protei 99.9 4.1E-22 8.9E-27 200.7 15.4 206 140-351 35-279 (477)
7 PHA02874 ankyrin repeat protei 99.9 6.6E-22 1.4E-26 197.0 15.7 176 175-351 32-233 (434)
8 PHA03100 ankyrin repeat protei 99.9 4.6E-22 9.9E-27 200.2 12.6 182 169-351 97-293 (480)
9 PHA02946 ankyin-like protein; 99.9 5.7E-22 1.2E-26 197.7 12.5 182 167-351 61-252 (446)
10 PHA02875 ankyrin repeat protei 99.9 2.4E-21 5.3E-26 191.5 14.5 172 179-351 3-178 (413)
11 PHA03095 ankyrin-like protein; 99.9 1.6E-21 3.4E-26 195.7 12.4 184 167-351 106-300 (471)
12 PTZ00458 acyl CoA binding prot 99.9 5.7E-22 1.2E-26 152.0 6.3 87 114-202 2-88 (90)
13 PHA02716 CPXV016; CPX019; EVM0 99.9 2.1E-21 4.6E-26 201.2 12.6 178 169-347 167-405 (764)
14 PHA02798 ankyrin-like protein; 99.9 2.8E-21 6E-26 195.3 12.3 186 165-351 58-301 (489)
15 PHA02791 ankyrin-like protein; 99.9 4.2E-21 9E-26 180.0 12.6 157 188-351 10-170 (284)
16 PHA02878 ankyrin repeat protei 99.9 3.7E-21 7.9E-26 193.8 12.8 159 191-351 148-310 (477)
17 PHA03100 ankyrin repeat protei 99.8 5.2E-21 1.1E-25 192.5 12.8 183 168-351 58-260 (480)
18 KOG0509 Ankyrin repeat and DHH 99.8 2.3E-21 5.1E-26 191.0 9.6 211 138-351 40-255 (600)
19 KOG0509 Ankyrin repeat and DHH 99.8 1.8E-21 3.8E-26 191.9 7.8 166 185-351 52-222 (600)
20 PHA02874 ankyrin repeat protei 99.8 1.6E-20 3.5E-25 187.0 14.4 168 184-351 8-200 (434)
21 PHA02876 ankyrin repeat protei 99.8 1.1E-20 2.4E-25 198.4 12.7 180 171-351 300-486 (682)
22 KOG4177 Ankyrin [Cell wall/mem 99.8 9.5E-21 2.1E-25 200.2 12.0 186 165-351 427-616 (1143)
23 PHA03095 ankyrin-like protein; 99.8 2.5E-20 5.5E-25 187.0 13.5 184 167-351 72-267 (471)
24 PHA02859 ankyrin repeat protei 99.8 3.1E-20 6.8E-25 167.1 12.7 138 210-348 20-165 (209)
25 PHA02741 hypothetical protein; 99.8 4.4E-20 9.6E-25 160.6 12.8 115 237-351 16-142 (169)
26 PHA02876 ankyrin repeat protei 99.8 2.6E-20 5.6E-25 195.5 13.5 181 169-350 264-451 (682)
27 PHA02716 CPXV016; CPX019; EVM0 99.8 1.7E-20 3.7E-25 194.5 11.8 164 187-350 152-361 (764)
28 PHA02989 ankyrin repeat protei 99.8 1.8E-20 4E-25 189.6 11.6 184 166-351 96-299 (494)
29 cd00435 ACBP Acyl CoA binding 99.8 4.5E-21 9.8E-26 146.5 5.4 84 113-200 1-84 (85)
30 KOG0508 Ankyrin repeat protein 99.8 7.2E-21 1.6E-25 181.1 6.2 176 175-351 39-225 (615)
31 PHA02917 ankyrin-like protein; 99.8 9.4E-20 2E-24 189.0 14.4 187 172-362 26-254 (661)
32 PHA02946 ankyin-like protein; 99.8 7.7E-20 1.7E-24 182.4 13.1 161 189-351 51-218 (446)
33 KOG0817 Acyl-CoA-binding prote 99.8 4.2E-20 9.1E-25 152.9 7.1 91 111-205 3-93 (142)
34 KOG0195 Integrin-linked kinase 99.8 6.2E-20 1.3E-24 165.3 8.4 127 225-351 17-143 (448)
35 PHA02743 Viral ankyrin protein 99.8 2.3E-19 5.1E-24 155.7 11.5 109 242-350 20-137 (166)
36 PF00887 ACBP: Acyl CoA bindin 99.8 2.3E-20 5E-25 144.2 3.4 86 113-200 1-86 (87)
37 KOG0510 Ankyrin repeat protein 99.8 1.2E-19 2.5E-24 182.5 8.7 213 134-347 179-416 (929)
38 PHA02884 ankyrin repeat protei 99.8 9.8E-19 2.1E-23 164.4 14.4 108 243-350 34-146 (300)
39 KOG0502 Integral membrane anky 99.8 1.1E-19 2.4E-24 158.1 7.0 163 188-351 107-269 (296)
40 PHA02795 ankyrin-like protein; 99.8 4.7E-19 1E-23 173.1 12.1 178 168-351 72-264 (437)
41 KOG0512 Fetal globin-inducing 99.8 5.9E-19 1.3E-23 148.3 9.8 141 219-359 74-218 (228)
42 PF12796 Ank_2: Ankyrin repeat 99.8 1.6E-18 3.5E-23 134.2 11.3 89 246-338 1-89 (89)
43 PHA02743 Viral ankyrin protein 99.8 1.6E-18 3.4E-23 150.5 11.9 108 236-343 51-163 (166)
44 KOG0510 Ankyrin repeat protein 99.8 8.3E-19 1.8E-23 176.4 11.3 184 167-351 143-351 (929)
45 KOG0514 Ankyrin repeat protein 99.8 2.2E-18 4.7E-23 159.8 12.8 213 105-350 183-416 (452)
46 PHA02989 ankyrin repeat protei 99.8 2.4E-18 5.3E-23 174.1 12.9 167 169-338 27-215 (494)
47 KOG4177 Ankyrin [Cell wall/mem 99.8 8.8E-19 1.9E-23 185.5 9.7 190 161-351 457-654 (1143)
48 PHA02798 ankyrin-like protein; 99.8 2.3E-18 5E-23 174.1 12.2 162 189-351 50-268 (489)
49 PHA02736 Viral ankyrin protein 99.8 1.7E-18 3.6E-23 148.2 9.3 114 238-351 13-136 (154)
50 PLN03192 Voltage-dependent pot 99.8 3.6E-18 7.7E-23 182.5 13.9 167 180-349 527-697 (823)
51 KOG0508 Ankyrin repeat protein 99.8 6.5E-19 1.4E-23 167.9 7.1 149 209-357 40-201 (615)
52 KOG0512 Fetal globin-inducing 99.8 1.6E-18 3.5E-23 145.7 7.9 108 244-351 65-173 (228)
53 PHA02736 Viral ankyrin protein 99.8 1.6E-18 3.5E-23 148.3 7.8 100 237-336 50-154 (154)
54 PHA02795 ankyrin-like protein; 99.8 2.3E-18 5E-23 168.3 9.8 164 173-339 111-293 (437)
55 PLN03192 Voltage-dependent pot 99.7 2.1E-17 4.7E-22 176.6 12.9 139 211-351 525-665 (823)
56 COG4281 ACB Acyl-CoA-binding p 99.7 1E-17 2.2E-22 120.3 5.1 82 113-198 2-83 (87)
57 PHA02730 ankyrin-like protein; 99.7 4.5E-17 9.8E-22 166.4 11.6 118 232-350 369-505 (672)
58 PHA02741 hypothetical protein; 99.7 8.2E-17 1.8E-21 140.1 11.2 100 235-334 53-158 (169)
59 KOG0514 Ankyrin repeat protein 99.7 3E-17 6.5E-22 152.2 8.8 119 232-351 258-383 (452)
60 PHA02917 ankyrin-like protein; 99.7 4.3E-17 9.4E-22 169.3 11.0 180 166-349 56-275 (661)
61 TIGR00870 trp transient-recept 99.7 6.4E-18 1.4E-22 179.0 4.9 174 173-351 47-267 (743)
62 KOG4214 Myotrophin and similar 99.7 2.3E-16 5E-21 119.5 8.3 105 244-349 4-108 (117)
63 cd00204 ANK ankyrin repeats; 99.7 1.5E-15 3.3E-20 122.8 13.8 113 239-351 4-116 (126)
64 PHA02730 ankyrin-like protein; 99.7 6E-16 1.3E-20 158.2 12.4 177 170-347 32-241 (672)
65 TIGR00870 trp transient-recept 99.6 8.9E-16 1.9E-20 162.8 10.8 165 184-351 24-218 (743)
66 PHA02884 ankyrin repeat protei 99.6 3.7E-15 8E-20 140.3 13.0 144 172-348 26-172 (300)
67 KOG0505 Myosin phosphatase, re 99.6 5.3E-16 1.1E-20 150.5 5.7 184 167-351 62-274 (527)
68 PHA02792 ankyrin-like protein; 99.6 2.8E-15 6E-20 152.0 9.8 157 194-352 22-226 (631)
69 KOG0505 Myosin phosphatase, re 99.6 2.4E-15 5.3E-20 145.9 8.9 114 236-349 67-239 (527)
70 PHA02792 ankyrin-like protein; 99.6 7E-15 1.5E-19 149.1 12.6 109 242-350 339-452 (631)
71 KOG0195 Integrin-linked kinase 99.6 7.3E-16 1.6E-20 139.2 3.5 105 246-350 4-109 (448)
72 KOG0507 CASK-interacting adapt 99.6 6E-15 1.3E-19 147.9 8.0 119 232-350 39-157 (854)
73 COG0666 Arp FOG: Ankyrin repea 99.5 5.1E-14 1.1E-18 125.4 12.2 114 238-351 69-190 (235)
74 PTZ00322 6-phosphofructo-2-kin 99.5 3.9E-14 8.5E-19 147.9 12.7 106 244-349 84-196 (664)
75 KOG0502 Integral membrane anky 99.5 2.2E-15 4.8E-20 131.3 2.6 177 166-346 117-296 (296)
76 PF13857 Ank_5: Ankyrin repeat 99.5 1.4E-14 3E-19 102.4 4.6 55 294-348 1-56 (56)
77 KOG0515 p53-interacting protei 99.5 4.9E-14 1.1E-18 136.1 8.9 107 244-350 552-659 (752)
78 KOG3676 Ca2+-permeable cation 99.5 4.4E-14 9.6E-19 143.2 8.1 114 238-351 180-318 (782)
79 PF12796 Ank_2: Ankyrin repeat 99.5 2.1E-13 4.6E-18 105.3 10.0 69 279-351 1-69 (89)
80 KOG0507 CASK-interacting adapt 99.5 8.2E-14 1.8E-18 139.9 7.1 181 169-351 73-264 (854)
81 PF13857 Ank_5: Ankyrin repeat 99.5 7.4E-14 1.6E-18 98.7 4.7 55 261-315 1-56 (56)
82 PF13637 Ank_4: Ankyrin repeat 99.4 2.2E-13 4.7E-18 95.5 6.6 54 275-328 1-54 (54)
83 KOG1710 MYND Zn-finger and ank 99.4 1.8E-12 3.8E-17 117.4 10.0 107 243-349 13-120 (396)
84 cd00204 ANK ankyrin repeats; 99.4 7.6E-12 1.6E-16 100.9 11.0 93 236-328 34-126 (126)
85 PF13637 Ank_4: Ankyrin repeat 99.3 2.4E-12 5.3E-17 90.1 5.8 54 242-295 1-54 (54)
86 COG0666 Arp FOG: Ankyrin repea 99.3 8.2E-12 1.8E-16 111.1 9.6 101 231-331 95-203 (235)
87 KOG3676 Ca2+-permeable cation 99.3 1.3E-11 2.8E-16 125.5 9.8 116 236-351 137-283 (782)
88 KOG4214 Myotrophin and similar 99.2 2.4E-11 5.1E-16 92.4 6.1 74 241-314 33-106 (117)
89 KOG1710 MYND Zn-finger and ank 99.2 8E-11 1.7E-15 106.7 8.5 96 233-328 36-132 (396)
90 KOG4369 RTK signaling protein 99.1 1.1E-11 2.5E-16 128.3 1.9 189 163-351 775-969 (2131)
91 PTZ00322 6-phosphofructo-2-kin 99.1 1.4E-10 3.1E-15 121.3 9.7 75 277-351 84-158 (664)
92 KOG0515 p53-interacting protei 99.1 8.5E-11 1.9E-15 114.0 7.3 97 233-329 574-673 (752)
93 KOG0783 Uncharacterized conser 99.0 1.8E-10 3.9E-15 116.8 3.9 95 257-351 32-129 (1267)
94 KOG0818 GTPase-activating prot 98.9 5E-09 1.1E-13 101.2 9.4 86 244-329 135-221 (669)
95 KOG4369 RTK signaling protein 98.9 4.7E-10 1E-14 116.6 1.7 185 167-351 846-1070(2131)
96 KOG0506 Glutaminase (contains 98.9 2.5E-09 5.3E-14 102.9 5.5 93 239-331 503-596 (622)
97 PF00023 Ank: Ankyrin repeat H 98.7 1.5E-08 3.4E-13 63.2 4.3 32 307-338 1-32 (33)
98 KOG0705 GTPase-activating prot 98.7 3E-08 6.4E-13 97.5 8.2 91 244-334 626-720 (749)
99 PF13606 Ank_3: Ankyrin repeat 98.7 1.6E-08 3.5E-13 61.7 4.0 29 307-335 1-29 (30)
100 KOG3878 Protein involved in ma 98.7 1.5E-08 3.3E-13 93.3 5.6 93 105-199 24-120 (469)
101 KOG0783 Uncharacterized conser 98.7 6E-09 1.3E-13 106.0 2.9 90 229-318 39-129 (1267)
102 PF13606 Ank_3: Ankyrin repeat 98.6 6.4E-08 1.4E-12 59.0 3.9 30 274-303 1-30 (30)
103 PF00023 Ank: Ankyrin repeat H 98.6 7.9E-08 1.7E-12 59.9 4.3 33 274-306 1-33 (33)
104 KOG0782 Predicted diacylglycer 98.6 1.3E-07 2.9E-12 92.8 7.7 104 246-349 870-975 (1004)
105 KOG0522 Ankyrin repeat protein 98.6 1.4E-07 3.1E-12 92.2 7.6 87 244-330 22-110 (560)
106 KOG0818 GTPase-activating prot 98.5 2.8E-07 6E-12 89.4 7.7 82 270-351 122-210 (669)
107 KOG0782 Predicted diacylglycer 98.4 5.8E-07 1.3E-11 88.4 7.0 94 237-330 894-989 (1004)
108 KOG0521 Putative GTPase activa 98.4 2.6E-07 5.6E-12 97.2 4.8 93 257-349 636-730 (785)
109 KOG0522 Ankyrin repeat protein 98.3 1.2E-06 2.7E-11 85.9 6.1 75 277-351 22-98 (560)
110 KOG0511 Ankyrin repeat protein 98.2 3.2E-06 7E-11 79.8 7.3 85 243-330 37-121 (516)
111 KOG0511 Ankyrin repeat protein 98.2 5.2E-06 1.1E-10 78.4 8.6 73 276-348 37-109 (516)
112 KOG0506 Glutaminase (contains 98.2 9.6E-07 2.1E-11 85.4 3.7 77 273-349 504-581 (622)
113 KOG0521 Putative GTPase activa 98.2 1.7E-06 3.7E-11 91.2 4.6 88 241-328 655-742 (785)
114 KOG0520 Uncharacterized conser 98.1 4.2E-06 9.1E-11 88.1 5.2 115 236-351 568-690 (975)
115 KOG2384 Major histocompatibili 98.0 1.4E-05 3E-10 69.0 7.0 69 265-333 2-71 (223)
116 KOG0705 GTPase-activating prot 97.9 2.1E-05 4.5E-10 77.9 6.2 66 235-300 654-719 (749)
117 KOG3609 Receptor-activated Ca2 97.6 0.00034 7.4E-09 72.6 9.4 96 235-337 55-160 (822)
118 KOG2505 Ankyrin repeat protein 97.3 0.00031 6.8E-09 68.8 4.7 64 288-351 404-473 (591)
119 KOG2384 Major histocompatibili 97.2 0.0007 1.5E-08 58.7 6.1 71 235-305 5-76 (223)
120 smart00248 ANK ankyrin repeats 96.9 0.0018 3.9E-08 37.0 4.1 27 308-334 2-28 (30)
121 KOG3609 Receptor-activated Ca2 96.9 0.003 6.4E-08 65.9 7.9 110 240-356 23-148 (822)
122 KOG0520 Uncharacterized conser 96.8 0.00052 1.1E-08 72.8 1.8 93 237-330 603-702 (975)
123 smart00248 ANK ankyrin repeats 96.6 0.0041 8.8E-08 35.4 4.0 28 275-302 2-29 (30)
124 KOG2505 Ankyrin repeat protein 96.3 0.0076 1.6E-07 59.4 6.0 71 255-328 404-480 (591)
125 PF06128 Shigella_OspC: Shigel 90.8 1.3 2.8E-05 40.0 7.8 91 243-334 180-280 (284)
126 PF11929 DUF3447: Domain of un 81.9 3.4 7.4E-05 30.5 4.9 48 243-297 7-54 (76)
127 PF05969 PSII_Ycf12: Photosyst 78.9 1.9 4.1E-05 26.5 2.1 33 2-36 1-33 (33)
128 PF11929 DUF3447: Domain of un 74.2 6.2 0.00013 29.1 4.3 48 276-330 7-54 (76)
129 TIGR02106 cyd_oper_ybgT cyd op 73.9 6 0.00013 23.8 3.2 25 10-34 5-29 (30)
130 PF06128 Shigella_OspC: Shigel 72.9 7.5 0.00016 35.2 5.1 56 245-300 218-279 (284)
131 PRK11677 hypothetical protein; 72.5 3.9 8.4E-05 34.0 3.0 22 4-25 3-24 (134)
132 PF08173 YbgT_YccB: Membrane b 70.3 7.5 0.00016 23.0 3.0 23 10-32 5-27 (28)
133 PF03158 DUF249: Multigene fam 68.5 9.7 0.00021 33.3 4.7 46 278-329 146-191 (192)
134 PF04931 DNA_pol_phi: DNA poly 65.6 34 0.00074 37.1 9.3 13 111-123 698-710 (784)
135 PF03158 DUF249: Multigene fam 62.5 17 0.00037 31.8 5.1 46 245-296 146-191 (192)
136 PF02419 PsbL: PsbL protein; 62.3 12 0.00026 23.4 2.9 18 10-27 16-33 (37)
137 PF14147 Spore_YhaL: Sporulati 59.3 8.8 0.00019 26.1 2.2 14 10-23 7-21 (52)
138 PRK00753 psbL photosystem II r 57.8 14 0.0003 23.3 2.7 19 9-27 17-35 (39)
139 PF00373 FERM_M: FERM central 57.8 23 0.0005 28.2 5.0 82 111-196 9-118 (126)
140 COG3105 Uncharacterized protei 53.7 17 0.00038 29.7 3.4 22 109-130 53-74 (138)
141 CHL00184 ycf12 Ycf12; Provisio 50.3 11 0.00025 23.1 1.4 32 3-36 2-33 (33)
142 CHL00038 psbL photosystem II p 50.1 23 0.0005 22.2 2.8 19 9-27 16-34 (38)
143 PF13940 Ldr_toxin: Toxin Ldr, 48.5 33 0.00072 21.1 3.2 22 3-24 10-31 (35)
144 smart00295 B41 Band 4.1 homolo 44.9 56 0.0012 28.3 5.8 82 111-196 97-199 (207)
145 KOG3836 HLH transcription fact 40.8 7 0.00015 40.1 -0.8 62 282-343 403-464 (605)
146 PF11151 DUF2929: Protein of u 37.5 51 0.0011 23.0 3.3 22 7-28 31-52 (57)
147 PF07301 DUF1453: Protein of u 35.7 32 0.00068 29.1 2.5 37 4-42 57-93 (148)
148 KOG1709 Guanidinoacetate methy 32.9 38 0.00082 30.7 2.6 39 262-300 2-40 (271)
149 KOG3841 TEF-1 and related tran 32.6 42 0.00091 32.6 3.0 68 104-172 74-147 (455)
150 PF03818 MadM: Malonate/sodium 32.3 35 0.00076 24.0 1.8 14 8-21 43-56 (60)
151 PF06295 DUF1043: Protein of u 32.0 43 0.00094 27.4 2.7 20 111-130 46-65 (128)
152 PRK13686 hypothetical protein; 30.1 49 0.0011 21.6 2.1 32 3-36 12-43 (43)
153 PF09026 CENP-B_dimeris: Centr 30.0 36 0.00078 26.4 1.7 14 114-127 43-56 (101)
154 PRK14749 hypothetical protein; 29.2 90 0.002 18.7 2.9 23 10-32 5-27 (30)
155 COG4897 CsbA Uncharacterized p 28.7 72 0.0016 23.3 2.9 18 11-28 4-21 (78)
156 PRK14740 kdbF potassium-transp 28.1 1.4E+02 0.003 17.8 3.5 22 4-25 3-24 (29)
157 KOG4591 Uncharacterized conser 27.8 43 0.00094 29.8 2.1 46 305-350 219-269 (280)
158 PRK13831 conjugal transfer pro 27.5 3.2E+02 0.0068 27.4 8.1 12 106-117 125-136 (432)
159 TIGR02507 MtrF tetrahydrometha 27.1 1E+02 0.0022 22.2 3.4 14 8-21 42-55 (65)
160 smart00426 TEA TEA domain. 26.7 56 0.0012 23.7 2.1 23 104-126 1-23 (68)
161 PRK14750 kdpF potassium-transp 26.3 1.1E+02 0.0025 18.1 2.9 17 9-25 8-24 (29)
162 KOG3836 HLH transcription fact 25.6 17 0.00037 37.5 -1.0 56 249-304 403-458 (605)
163 KOG4503 Uncharacterized conser 25.4 73 0.0016 28.4 3.0 22 4-25 86-107 (230)
164 COG5085 Predicted membrane pro 25.4 73 0.0016 28.4 3.0 22 4-25 86-107 (230)
165 PF05545 FixQ: Cbb3-type cytoc 24.5 1.3E+02 0.0029 19.9 3.6 25 4-28 6-30 (49)
166 PHA00022 VII minor coat protei 22.7 98 0.0021 18.1 2.2 17 5-21 3-20 (28)
167 PRK01026 tetrahydromethanopter 22.6 1.1E+02 0.0025 22.7 3.1 18 11-28 56-73 (77)
168 KOG3533 Inositol 1,4,5-trispho 22.0 2.1E+02 0.0046 32.9 6.2 37 8-45 2419-2457(2706)
169 PF04210 MtrG: Tetrahydrometha 21.8 97 0.0021 22.5 2.5 17 11-27 53-69 (70)
170 PF02936 COX4: Cytochrome c ox 21.7 1.4E+02 0.0031 24.9 4.0 27 2-28 72-98 (142)
171 PF10731 Anophelin: Thrombin i 21.5 90 0.0019 22.0 2.2 15 15-29 6-20 (65)
172 PF09889 DUF2116: Uncharacteri 21.4 1.9E+02 0.004 20.4 3.9 20 7-26 37-56 (59)
173 TIGR03758 conj_TIGR03758 integ 21.0 1.1E+02 0.0023 22.1 2.7 16 6-21 17-32 (65)
174 PF01102 Glycophorin_A: Glycop 20.7 1.1E+02 0.0024 25.0 3.0 17 11-27 65-81 (122)
175 COG3086 RseC Positive regulato 20.5 1.2E+02 0.0026 25.5 3.3 22 9-30 108-129 (150)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.7e-27 Score=200.94 Aligned_cols=177 Identities=23% Similarity=0.320 Sum_probs=156.3
Q ss_pred HhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc---ccccccccccccCCCCchHHHHHHH
Q 043342 175 QKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIHAFA 250 (363)
Q Consensus 175 ~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh~Aa 250 (363)
++.|.+|+|.| ..+.++++..|+.+-....+.++..|++|+|++++.+..+ .++.+...+.+..+..|.|+||+|+
T Consensus 35 dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAa 114 (226)
T KOG4412|consen 35 DQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAA 114 (226)
T ss_pred cccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhh
Confidence 34789999985 5688999999997666666667888999999999888543 4445546677888899999999999
Q ss_pred HcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 043342 251 REGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQ 330 (363)
Q Consensus 251 ~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 330 (363)
..|.++++++|+++|+.++.+|..|.||||-|+..|.+.++++|+..|+.+|.+|..|+||||+|..-|+.++..+|+++
T Consensus 115 gK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~ 194 (226)
T KOG4412|consen 115 GKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRA 194 (226)
T ss_pred cCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHhcCc
Q 043342 331 NADIGMKDNDGNSPCHVCESDW 352 (363)
Q Consensus 331 Gad~~~~d~~G~TpL~~A~~~~ 352 (363)
||++...|+.| ||+.+++..+
T Consensus 195 gAd~~~edke~-t~~~~a~~~l 215 (226)
T KOG4412|consen 195 GADTDREDKEG-TALRIACNEL 215 (226)
T ss_pred ccceeeccccC-chHHHHHHHH
Confidence 99999999988 9999888764
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=9.2e-27 Score=196.45 Aligned_cols=165 Identities=24% Similarity=0.341 Sum_probs=139.0
Q ss_pred hcCccccccccccccccc-cccCCCCcchhhhhcCCCCCc---ccccccccccccCCCCchHHHHHHHHcCCHHHHHHHH
Q 043342 187 QKYIDIVTELYPTWAAGS-SLKSKRGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCI 262 (363)
Q Consensus 187 ~~yv~~v~~Ll~~~~~~~-~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL 262 (363)
..+...+.+++..-.... ..+..++.+++|-+.+.+... .+++......+..|..|+||||.||..|+.++|+.|+
T Consensus 13 ~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll 92 (226)
T KOG4412|consen 13 NCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELL 92 (226)
T ss_pred hchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHh
Confidence 344444555554433222 334458999999888777543 3333444455667899999999999999999999999
Q ss_pred Hc-CCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q 043342 263 EN-GVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDG 341 (363)
Q Consensus 263 ~~-g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G 341 (363)
.+ |+++|..+..|+|+||||+..|.++|+++|+++|+.++.+|..|+||||-|+..|..+++++|+..|+.+|..|+.|
T Consensus 93 ~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G 172 (226)
T KOG4412|consen 93 NRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYG 172 (226)
T ss_pred cCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccC
Confidence 98 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHH-hcC
Q 043342 342 NSPCHVC-ESD 351 (363)
Q Consensus 342 ~TpL~~A-~~~ 351 (363)
+||||.| ++.
T Consensus 173 ~TpL~~al~e~ 183 (226)
T KOG4412|consen 173 FTPLHHALAEG 183 (226)
T ss_pred ccHHHHHHhcc
Confidence 9999999 554
No 3
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.89 E-value=7.1e-23 Score=184.33 Aligned_cols=176 Identities=16% Similarity=0.105 Sum_probs=144.0
Q ss_pred HHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCC----CCcccccccccccccCC-CCchHH
Q 043342 172 QAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKA----PMGPVFSSFAYEEESGN-DLKMDA 245 (363)
Q Consensus 172 ~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~----~~~~ll~~~~~~~~~~~-~~g~t~ 245 (363)
++..+...+|++.| ..++++.|+.|+.. ....+..+.|+++.+...+ .+..++...+.+.+..+ ..|.||
T Consensus 15 ~~~~~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~Tp 90 (209)
T PHA02859 15 DYLFYRYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSA 90 (209)
T ss_pred HHHhhccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCH
Confidence 34456678999986 45788999988753 2346778899999776433 12233333444555554 578999
Q ss_pred HHHHHHc---CCHHHHHHHHHcCCCCccCCCCCChHHHHHHH--cCCHHHHHHHHhCCCCCCCCCCCCCcHHHH-HHHcC
Q 043342 246 IHAFARE---GDMDNLLKCIENGVSVNLRDSEGRAPLHWAVD--RGHLNISELLVSKNADVNAKDNEGQTPLHY-AVVCD 319 (363)
Q Consensus 246 Lh~Aa~~---g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~--~g~~~iv~~Ll~~gadin~~d~~G~TpLh~-A~~~g 319 (363)
||+|+.. ++.+++++|+++|+++|.+|..|.||||+|+. .++.+++++|++.|++++.+|..|.||||. |+..+
T Consensus 91 Lh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~ 170 (209)
T PHA02859 91 LHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHS 170 (209)
T ss_pred HHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcC
Confidence 9998764 47999999999999999999999999999886 468999999999999999999999999995 56678
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 320 REAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 320 ~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+.+++++|+++|++++.+|..|.||||+|..+
T Consensus 171 ~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~ 202 (209)
T PHA02859 171 DKKIFDFLTSLGIDINETNKSGYNCYDLIKFR 202 (209)
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhh
Confidence 99999999999999999999999999999875
No 4
>PHA02791 ankyrin-like protein; Provisional
Probab=99.89 E-value=4.7e-23 Score=193.15 Aligned_cols=172 Identities=10% Similarity=0.061 Sum_probs=122.3
Q ss_pred HhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHH
Q 043342 175 QKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAR 251 (363)
Q Consensus 175 ~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~ 251 (363)
+..|.||++.| ..++.++++.|+..+... ...++.++++.++..+... .++...+.+.+..+..|.||||+|+.
T Consensus 27 D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~---n~~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~ 103 (284)
T PHA02791 27 DVHGHSALYYAIADNNVRLVCTLLNAGALK---NLLENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVD 103 (284)
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCcCCC---cCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 45577888875 446677777777755432 2334677887776665432 22333344556667778888888888
Q ss_pred cCCHHHHHHHHHcCCCCccCCCCC-ChHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHh
Q 043342 252 EGDMDNLLKCIENGVSVNLRDSEG-RAPLHWAVDRGHLNISELLVSKNADVNAKD-NEGQTPLHYAVVCDREAIAQFLVK 329 (363)
Q Consensus 252 ~g~~~~v~~LL~~g~~vn~~d~~g-~TpLh~A~~~g~~~iv~~Ll~~gadin~~d-~~G~TpLh~A~~~g~~~iv~~Ll~ 329 (363)
.|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|++++.+. .| ..|.||||+|+..|+.+++++|++
T Consensus 104 ~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~ 181 (284)
T PHA02791 104 SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLD 181 (284)
T ss_pred cCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHH
Confidence 888888888888888887777776 47888888888888888888776543 22 247788888888888888888888
Q ss_pred CCCCCCCCCCCCCcH-HHHHhcC
Q 043342 330 QNADIGMKDNDGNSP-CHVCESD 351 (363)
Q Consensus 330 ~Gad~~~~d~~G~Tp-L~~A~~~ 351 (363)
+|++++.+|..|.|| ||+|+.+
T Consensus 182 ~gAd~n~~d~~g~t~~L~~Aa~~ 204 (284)
T PHA02791 182 YMTSTNTNNSLLFIPDIKLAIDN 204 (284)
T ss_pred CCCCCCcccCCCCChHHHHHHHc
Confidence 888888888888776 8888765
No 5
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.88 E-value=1.8e-22 Score=199.53 Aligned_cols=177 Identities=19% Similarity=0.193 Sum_probs=140.8
Q ss_pred HHhcCCCCHHHHH-hcCccccccccccccccccccCCCCcchhhhhcCCCCCc---ccccccccccccCCCCchHHHHHH
Q 043342 174 WQKLGAMPPEEAM-QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIHAF 249 (363)
Q Consensus 174 w~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh~A 249 (363)
....|.+|+|.|. .+..++++.|+..+.... .+...+.++++.+...+... .++..........+..|.||||+|
T Consensus 31 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A 109 (413)
T PHA02875 31 EIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD-VKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLA 109 (413)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-ccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHH
Confidence 3445788888764 467888888888765432 34456778888877776543 233333333344456688999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 043342 250 AREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVK 329 (363)
Q Consensus 250 a~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 329 (363)
+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 110 ~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~ 189 (413)
T PHA02875 110 TILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLD 189 (413)
T ss_pred HHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999999999899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC-cHHHHHhcC
Q 043342 330 QNADIGMKDNDGN-SPCHVCESD 351 (363)
Q Consensus 330 ~Gad~~~~d~~G~-TpL~~A~~~ 351 (363)
+|++++..+..|. ||+|+|+.+
T Consensus 190 ~ga~~n~~~~~~~~t~l~~A~~~ 212 (413)
T PHA02875 190 SGANIDYFGKNGCVAALCYAIEN 212 (413)
T ss_pred CCCCCCcCCCCCCchHHHHHHHc
Confidence 9999999888774 788878765
No 6
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.88 E-value=4.1e-22 Score=200.75 Aligned_cols=206 Identities=17% Similarity=0.159 Sum_probs=127.3
Q ss_pred HhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHh-cCccccccccccccccccccCCCCcchhhhh
Q 043342 140 QLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQ-KYIDIVTELYPTWAAGSSLKSKRGQEDAAST 218 (363)
Q Consensus 140 ~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~-~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a 218 (363)
...+..|+..+..|.....+ +-+..++.++..+..|.||+|.|.. +..+.+..|+........ ..+.++++.+
T Consensus 35 ~~~~tPLh~A~~~g~~e~vk---~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~---~~~~~~l~~a 108 (477)
T PHA02878 35 LIPFIPLHQAVEARNLDVVK---SLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV---FYTLVAIKDA 108 (477)
T ss_pred ccCcchHHHHHHcCCHHHHH---HHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc---ccchhhHHHH
Confidence 34555677766666643221 1233456777888889999998644 555666666553321111 1111121111
Q ss_pred cCCCC-----------------------------------CcccccccccccccCCCC-chHHHHHHHHcCCHHHHHHHH
Q 043342 219 DSKAP-----------------------------------MGPVFSSFAYEEESGNDL-KMDAIHAFAREGDMDNLLKCI 262 (363)
Q Consensus 219 ~~~~~-----------------------------------~~~ll~~~~~~~~~~~~~-g~t~Lh~Aa~~g~~~~v~~LL 262 (363)
...+. +..++...+.+.+..+.. |.||||+|+..|+.+++++|+
T Consensus 109 ~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll 188 (477)
T PHA02878 109 FNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLL 188 (477)
T ss_pred HHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHH
Confidence 11100 111222223334444555 777777777777777777777
Q ss_pred HcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc-CCHHHHHHHHhCCCCCCCCCC-C
Q 043342 263 ENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVC-DREAIAQFLVKQNADIGMKDN-D 340 (363)
Q Consensus 263 ~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~-g~~~iv~~Ll~~Gad~~~~d~-~ 340 (363)
++|++++.+|..|.||||+|+..++.+++++|++.|+++|.+|..|+||||+|+.. ++.+++++|+++|++++.++. .
T Consensus 189 ~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~ 268 (477)
T PHA02878 189 SYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYIL 268 (477)
T ss_pred HCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCC
Confidence 77777777777777777777777777777777777777777777777777777754 567777777777777777765 6
Q ss_pred CCcHHHHHhcC
Q 043342 341 GNSPCHVCESD 351 (363)
Q Consensus 341 G~TpL~~A~~~ 351 (363)
|.||||+|..+
T Consensus 269 g~TpLh~A~~~ 279 (477)
T PHA02878 269 GLTALHSSIKS 279 (477)
T ss_pred CCCHHHHHccC
Confidence 77777777554
No 7
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.88 E-value=6.6e-22 Score=196.95 Aligned_cols=176 Identities=22% Similarity=0.268 Sum_probs=125.8
Q ss_pred HhcCCCCHHHHH-hcCccccccccccccccccccCCCCcchhhhhcCCCCCc-------------------------ccc
Q 043342 175 QKLGAMPPEEAM-QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG-------------------------PVF 228 (363)
Q Consensus 175 ~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~-------------------------~ll 228 (363)
...+.+|++.|. .+..++++.|+..+.+... .+..+.++++.+...+... ..+
T Consensus 32 ~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~-~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~l 110 (434)
T PHA02874 32 VDETTTPLIDAIRSGDAKIVELFIKHGADINH-INTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTI 110 (434)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHH
Confidence 344556666543 3555666666655443322 3344555555444433211 111
Q ss_pred cccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q 043342 229 SSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEG 308 (363)
Q Consensus 229 ~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G 308 (363)
...+.+.+..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|
T Consensus 111 l~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g 190 (434)
T PHA02874 111 LDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNG 190 (434)
T ss_pred HHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCC
Confidence 11223345567778889999999888889998888888888888888899999998888889999998888888888888
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 309 QTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 309 ~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 191 ~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~ 233 (434)
T PHA02874 191 ESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIH 233 (434)
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHC
Confidence 9999999988888999999888888877777777777777654
No 8
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.87 E-value=4.6e-22 Score=200.17 Aligned_cols=182 Identities=24% Similarity=0.318 Sum_probs=156.2
Q ss_pred hhHHHHHhcCCCCHHHHH---hcCccccccccccccccccccCCCCcchhhhhcCCC--CCc--ccccccccccccCCCC
Q 043342 169 AKWQAWQKLGAMPPEEAM---QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKA--PMG--PVFSSFAYEEESGNDL 241 (363)
Q Consensus 169 ak~~aw~~~g~t~l~~A~---~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~--~~~--~ll~~~~~~~~~~~~~ 241 (363)
+..+..+..|.+|++.|. .+..++++.|+..+.+. ...+..|.++++.+...+ ... .++...+.+.+..+..
T Consensus 97 a~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~ 175 (480)
T PHA03100 97 ANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANV-NIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRY 175 (480)
T ss_pred CCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCC
Confidence 334555677899999876 46789999999877654 346678899999887666 322 2333344555666778
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCC------ChHHHHHHHcCC--HHHHHHHHhCCCCCCCCCCCCCcHHH
Q 043342 242 KMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEG------RAPLHWAVDRGH--LNISELLVSKNADVNAKDNEGQTPLH 313 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g------~TpLh~A~~~g~--~~iv~~Ll~~gadin~~d~~G~TpLh 313 (363)
|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..++ .+++++|++.|+++|.+|..|.||||
T Consensus 176 g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~ 255 (480)
T PHA03100 176 GYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLH 255 (480)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 9999999999999999999999999999999888 899999999999 99999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 314 YAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 314 ~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+..|+.+++++|+++|++++.+|..|.||+|+|+.+
T Consensus 256 ~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~ 293 (480)
T PHA03100 256 YAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILN 293 (480)
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHh
Confidence 99999999999999999999999999999999999865
No 9
>PHA02946 ankyin-like protein; Provisional
Probab=99.87 E-value=5.7e-22 Score=197.66 Aligned_cols=182 Identities=14% Similarity=0.147 Sum_probs=150.5
Q ss_pred hhhhHHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCC--Cc--ccccccccccc-cCCC
Q 043342 167 ARAKWQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAP--MG--PVFSSFAYEEE-SGND 240 (363)
Q Consensus 167 ~~ak~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~--~~--~ll~~~~~~~~-~~~~ 240 (363)
..+..+..+..|.||+|.| ..+..++++.|+..+++.. .+++.|.||++.+...+. +. .++...+.+.+ ..+.
T Consensus 61 ~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin-~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~ 139 (446)
T PHA02946 61 RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPN-ACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDE 139 (446)
T ss_pred CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCC
Confidence 4456677888899999986 5577899999998776554 578889999997654332 11 22333334443 4678
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcC--CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 043342 241 LKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRG--HLNISELLVSKNADVNAKDNEGQTPLHYAVVC 318 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g--~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~ 318 (363)
.|.|||| ||..|+.++++.|++.|++++.+|..|+||||+|+..+ +.+++++|++.|+++|.+|..|+||||+|+..
T Consensus 140 ~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~ 218 (446)
T PHA02946 140 EGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSK 218 (446)
T ss_pred CCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 8999998 66779999999999999999999999999999998755 46899999999999999999999999999998
Q ss_pred C--CHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 319 D--REAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 319 g--~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+ +.+++++|+. |++++.+|..|.||||+|+..
T Consensus 219 ~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~ 252 (446)
T PHA02946 219 TVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKT 252 (446)
T ss_pred CCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHh
Confidence 6 7899999985 999999999999999999875
No 10
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.86 E-value=2.4e-21 Score=191.48 Aligned_cols=172 Identities=18% Similarity=0.212 Sum_probs=145.7
Q ss_pred CCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHcCCH
Q 043342 179 AMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAREGDM 255 (363)
Q Consensus 179 ~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~ 255 (363)
.+.++.| ..++.++++.|+..+.+... ....|.++++.+...+... .++...+...+..+..+.||||.|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~-~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~ 81 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLDIGINPNF-EIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDV 81 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHHCCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCH
Confidence 3556665 55789999999987765443 5567999999888776543 233333444455566789999999999999
Q ss_pred HHHHHHHHcCCCCc-cCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 043342 256 DNLLKCIENGVSVN-LRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADI 334 (363)
Q Consensus 256 ~~v~~LL~~g~~vn-~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~ 334 (363)
++++.|++.|..++ ..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++
T Consensus 82 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~ 161 (413)
T PHA02875 82 KAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACL 161 (413)
T ss_pred HHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Confidence 99999999997764 45677999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHhcC
Q 043342 335 GMKDNDGNSPCHVCESD 351 (363)
Q Consensus 335 ~~~d~~G~TpL~~A~~~ 351 (363)
+.+|..|.||||+|+..
T Consensus 162 ~~~d~~g~TpL~~A~~~ 178 (413)
T PHA02875 162 DIEDCCGCTPLIIAMAK 178 (413)
T ss_pred CCCCCCCCCHHHHHHHc
Confidence 99999999999999865
No 11
>PHA03095 ankyrin-like protein; Provisional
Probab=99.86 E-value=1.6e-21 Score=195.72 Aligned_cols=184 Identities=21% Similarity=0.212 Sum_probs=149.3
Q ss_pred hhhhHHHHHhcCCCCHHHHHh---cCccccccccccccccccccCCCCcchhhhhcCCCCC----cccccccccccccCC
Q 043342 167 ARAKWQAWQKLGAMPPEEAMQ---KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPM----GPVFSSFAYEEESGN 239 (363)
Q Consensus 167 ~~ak~~aw~~~g~t~l~~A~~---~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~----~~ll~~~~~~~~~~~ 239 (363)
.++..+..+..|.||+|.|.. ...++++.|+..+.+.. ..+..|.++++.+...+.. ..++...+.+....+
T Consensus 106 ~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~-~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d 184 (471)
T PHA03095 106 AGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN-ALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVD 184 (471)
T ss_pred cCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccC
Confidence 445566777788999998773 24578888888766543 3567788888765443321 122223333444457
Q ss_pred CCchHHHHHHHHc--CCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCH--HHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 043342 240 DLKMDAIHAFARE--GDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHL--NISELLVSKNADVNAKDNEGQTPLHYA 315 (363)
Q Consensus 240 ~~g~t~Lh~Aa~~--g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~--~iv~~Ll~~gadin~~d~~G~TpLh~A 315 (363)
..|.||||+++.. ++.++++.|++.|++++.+|..|.||||+|+..|+. .+++.|+..|+++|.+|..|+||||+|
T Consensus 185 ~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A 264 (471)
T PHA03095 185 DRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYA 264 (471)
T ss_pred CCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 8899999999875 678999999999999999999999999999999874 578899999999999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 316 VVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 316 ~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+..|+.+++++|+++|++++.+|.+|.||||+|+.+
T Consensus 265 ~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~ 300 (471)
T PHA03095 265 AVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRN 300 (471)
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHh
Confidence 999999999999999999999999999999999865
No 12
>PTZ00458 acyl CoA binding protein; Provisional
Probab=99.86 E-value=5.7e-22 Score=151.98 Aligned_cols=87 Identities=32% Similarity=0.746 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCcccc
Q 043342 114 DEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIV 193 (363)
Q Consensus 114 ~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~~v 193 (363)
.+.|++|+.+|++.+.+ ..++++++|+||+||||||+|+|+.++|++|++.+++||++|.++++|+.++||+.||+++
T Consensus 2 ~~~F~~A~~~v~~~~~~--~~~s~d~~L~lYalyKQAt~G~c~~~~P~~~d~~~raKw~AW~~l~~ms~~eA~~~YI~l~ 79 (90)
T PTZ00458 2 ADLFEECVSFINSLPKT--VNLSVEIKLDLYKYYKQSTVGNCNIKEPSMFKYQDRKKYEAWKSIENLNREDAKKRYVEIV 79 (90)
T ss_pred hHHHHHHHHHHHhCCCC--CCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 35699999999986654 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc
Q 043342 194 TELYPTWAA 202 (363)
Q Consensus 194 ~~Ll~~~~~ 202 (363)
..+++.|..
T Consensus 80 ~~l~~~w~~ 88 (90)
T PTZ00458 80 TELFPNWEK 88 (90)
T ss_pred HHHhhcccc
Confidence 999998864
No 13
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.86 E-value=2.1e-21 Score=201.20 Aligned_cols=178 Identities=22% Similarity=0.174 Sum_probs=147.7
Q ss_pred hhHHHH-HhcCCCCHHHHHh---cCccccccccccccccccccCCCCcchhhhhcCCCCC----cccccccccccccCCC
Q 043342 169 AKWQAW-QKLGAMPPEEAMQ---KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPM----GPVFSSFAYEEESGND 240 (363)
Q Consensus 169 ak~~aw-~~~g~t~l~~A~~---~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~----~~ll~~~~~~~~~~~~ 240 (363)
+..++. +..|.+|+|.|.. ...++++.|+..+.+.. .++..|.||++.++..+.. ..++...+.+.+..+.
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN-~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~ 245 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVN-LQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCV 245 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCC
Confidence 556666 7778999998653 24688999998776544 3677899999988877642 2334455667778888
Q ss_pred CchHHHHHH-------------------------------------HHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHH
Q 043342 241 LKMDAIHAF-------------------------------------AREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAV 283 (363)
Q Consensus 241 ~g~t~Lh~A-------------------------------------a~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~ 283 (363)
.|.||||.| ++.|+.++++.|++.|++++.+|..|+||||+|+
T Consensus 246 ~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aa 325 (764)
T PHA02716 246 NGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYI 325 (764)
T ss_pred CCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHH
Confidence 999999965 4457889999999999999999999999999987
Q ss_pred H--cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--------------cCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 284 D--RGHLNISELLVSKNADVNAKDNEGQTPLHYAVV--------------CDREAIAQFLVKQNADIGMKDNDGNSPCHV 347 (363)
Q Consensus 284 ~--~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~--------------~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~ 347 (363)
. .++.+++++|++.|+++|.+|..|+||||+|+. .++.+++++|+++|++++.+|..|.||||.
T Consensus 326 a~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~ 405 (764)
T PHA02716 326 LRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTS 405 (764)
T ss_pred HHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHH
Confidence 5 467899999999999999999999999999875 368899999999999999999999999993
No 14
>PHA02798 ankyrin-like protein; Provisional
Probab=99.85 E-value=2.8e-21 Score=195.33 Aligned_cols=186 Identities=18% Similarity=0.211 Sum_probs=150.7
Q ss_pred hhhhhhHHHHHhcCCCCHHHHHh------cCccccccccccccccccccCCCCcchhhhhcCCCCC-----ccccccccc
Q 043342 165 MTARAKWQAWQKLGAMPPEEAMQ------KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPM-----GPVFSSFAY 233 (363)
Q Consensus 165 ~~~~ak~~aw~~~g~t~l~~A~~------~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~-----~~ll~~~~~ 233 (363)
+..++..++.+..|.||++.+.. ...++++.|+..+++.. .++..|.||+|.+...+.. ..++...+.
T Consensus 58 l~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN-~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Ga 136 (489)
T PHA02798 58 INLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADIN-KKNSDGETPLYCLLSNGYINNLEILLFMIENGA 136 (489)
T ss_pred HHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCC-CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCC
Confidence 34556677778889999988654 34788999998877644 4677899999977665422 223334456
Q ss_pred ccccCCCCchHHHHHHHHcCC---HHHHHHHHHcCCCCccCC-CCCChHHHHHHHc----CCHHHHHHHHhCCC------
Q 043342 234 EEESGNDLKMDAIHAFAREGD---MDNLLKCIENGVSVNLRD-SEGRAPLHWAVDR----GHLNISELLVSKNA------ 299 (363)
Q Consensus 234 ~~~~~~~~g~t~Lh~Aa~~g~---~~~v~~LL~~g~~vn~~d-~~g~TpLh~A~~~----g~~~iv~~Ll~~ga------ 299 (363)
+.+..+..|.||||+|++.|+ .+++++|+++|++++..+ ..|.||||.++.. ++.+++++|+++|+
T Consensus 137 dvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~ 216 (489)
T PHA02798 137 DTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKEN 216 (489)
T ss_pred CccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCC
Confidence 677788899999999999987 999999999999999875 4689999988754 46788888887765
Q ss_pred ---------------------------------CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 043342 300 ---------------------------------DVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCH 346 (363)
Q Consensus 300 ---------------------------------din~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~ 346 (363)
++|.+|..|+||||+|+..|+.+++++|+++||+++.+|..|.||||
T Consensus 217 ~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~ 296 (489)
T PHA02798 217 KSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLF 296 (489)
T ss_pred ccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHH
Confidence 45557778999999999999999999999999999999999999999
Q ss_pred HHhcC
Q 043342 347 VCESD 351 (363)
Q Consensus 347 ~A~~~ 351 (363)
+|+.+
T Consensus 297 ~A~~~ 301 (489)
T PHA02798 297 TAFEN 301 (489)
T ss_pred HHHHc
Confidence 99865
No 15
>PHA02791 ankyrin-like protein; Provisional
Probab=99.85 E-value=4.2e-21 Score=180.02 Aligned_cols=157 Identities=18% Similarity=0.108 Sum_probs=129.0
Q ss_pred cCccccccccccccccccccCCCCcchhhhhcCCCCCccc--ccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcC
Q 043342 188 KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPV--FSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENG 265 (363)
Q Consensus 188 ~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~l--l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g 265 (363)
.+.++++.|+..+. ..++..|.|+++.+...+....+ +.....+.+.. .+.||||+|+..|+.+++++|+..|
T Consensus 10 ~~~~~~~~Lis~~a---~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~G 84 (284)
T PHA02791 10 KSKQLKSFLSSKDA---FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSG 84 (284)
T ss_pred CHHHHHHHHHhCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHCC
Confidence 35566777776433 45678899999999888755432 22222222322 4689999999999999999999999
Q ss_pred CCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCc
Q 043342 266 VSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQ-TPLHYAVVCDREAIAQFLVKQNADIGMKD-NDGNS 343 (363)
Q Consensus 266 ~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~-TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d-~~G~T 343 (363)
++++.+|..|+||||+|+..|+.+++++|+.+|++++.++..|+ ||||+|+..|+.+++++|++++.+. .| ..|.|
T Consensus 85 advn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~T 162 (284)
T PHA02791 85 MDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLS 162 (284)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCcc
Confidence 99999999999999999999999999999999999999999885 8999999999999999999987644 23 35899
Q ss_pred HHHHHhcC
Q 043342 344 PCHVCESD 351 (363)
Q Consensus 344 pL~~A~~~ 351 (363)
|||+|+.+
T Consensus 163 pLh~Aa~~ 170 (284)
T PHA02791 163 CIHITIKN 170 (284)
T ss_pred HHHHHHHc
Confidence 99999876
No 16
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.85 E-value=3.7e-21 Score=193.85 Aligned_cols=159 Identities=22% Similarity=0.259 Sum_probs=137.0
Q ss_pred cccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCC
Q 043342 191 DIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSV 268 (363)
Q Consensus 191 ~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~v 268 (363)
++++.|+..+.+........|.+++|.++..+... .++...+.+.+..+..|.||||.|++.|+.++++.|++.|+++
T Consensus 148 ~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i 227 (477)
T PHA02878 148 EITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST 227 (477)
T ss_pred HHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 47888888777655533334899999888877543 2333445566778889999999999999999999999999999
Q ss_pred ccCCCCCChHHHHHHHc-CCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 043342 269 NLRDSEGRAPLHWAVDR-GHLNISELLVSKNADVNAKDN-EGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCH 346 (363)
Q Consensus 269 n~~d~~g~TpLh~A~~~-g~~~iv~~Ll~~gadin~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~ 346 (363)
+.+|..|+||||+|+.. ++.+++++|+++|+++|.++. .|.||||+| .++.+++++|+++|++++.+|..|.||||
T Consensus 228 n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~ 305 (477)
T PHA02878 228 DARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLS 305 (477)
T ss_pred CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 99999999999999976 689999999999999999886 799999999 57889999999999999999999999999
Q ss_pred HHhcC
Q 043342 347 VCESD 351 (363)
Q Consensus 347 ~A~~~ 351 (363)
+|+..
T Consensus 306 ~A~~~ 310 (477)
T PHA02878 306 SAVKQ 310 (477)
T ss_pred HHHHH
Confidence 99864
No 17
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.85 E-value=5.2e-21 Score=192.51 Aligned_cols=183 Identities=23% Similarity=0.312 Sum_probs=158.3
Q ss_pred hhhHHHHHhcCCCCHHH-----H-HhcCccccccccccccccccccCCCCcchhhhhc--CCCCCc--cccccccccccc
Q 043342 168 RAKWQAWQKLGAMPPEE-----A-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTD--SKAPMG--PVFSSFAYEEES 237 (363)
Q Consensus 168 ~ak~~aw~~~g~t~l~~-----A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~--~~~~~~--~ll~~~~~~~~~ 237 (363)
++..+.....+.++++. | ..+..++++.|+..+++. ...+..|.++++.+. ..+... .++...+.+.+.
T Consensus 58 g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i-~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~ 136 (480)
T PHA03100 58 GADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANV-NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNI 136 (480)
T ss_pred CCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCC-CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCc
Confidence 34445556667889988 6 457789999999887766 557778899999888 666433 233334455667
Q ss_pred CCCCchHHHHHHHHcC--CHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC------C
Q 043342 238 GNDLKMDAIHAFAREG--DMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEG------Q 309 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g--~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G------~ 309 (363)
.+..|.||||+|+..| +.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..| .
T Consensus 137 ~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 216 (480)
T PHA03100 137 KNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFE 216 (480)
T ss_pred cCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHH
Confidence 7888999999999999 9999999999999999999999999999999999999999999999999999999 9
Q ss_pred cHHHHHHHcCC--HHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 310 TPLHYAVVCDR--EAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 310 TpLh~A~~~g~--~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
||||+|+..++ .+++++|+++|++++.+|..|.||||+|+..
T Consensus 217 t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~ 260 (480)
T PHA03100 217 TPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYN 260 (480)
T ss_pred hHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 99999999999 9999999999999999999999999999875
No 18
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.85 E-value=2.3e-21 Score=191.02 Aligned_cols=211 Identities=19% Similarity=0.290 Sum_probs=177.5
Q ss_pred hhHhHHhhhhhccccCCCCCCCCchhhhhh-hhhHHHHHhcCCCCHHH-HHhcCccccccccccccccccccCCCCcchh
Q 043342 138 DVQLQLYALYKIATEGPCSAPQPSALKMTA-RAKWQAWQKLGAMPPEE-AMQKYIDIVTELYPTWAAGSSLKSKRGQEDA 215 (363)
Q Consensus 138 ~~~L~lyalykqAt~G~~~~~~p~~~~~~~-~ak~~aw~~~g~t~l~~-A~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~ 215 (363)
++...+...++.+..|.....+. -+.. ....+.-++.|-+.+|- |+.+.+++++.|+..+++.+.....-+.+|+
T Consensus 40 e~d~~~~~~v~A~q~G~l~~v~~---lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPL 116 (600)
T KOG0509|consen 40 EEDSSLDDIVKATQYGELETVKE---LVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPL 116 (600)
T ss_pred ccchhhhhhhhHhhcchHHHHHH---HHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcc
Confidence 34444556677777777543321 1122 44556667788899996 6888999999999999988887778888999
Q ss_pred hhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHH
Q 043342 216 ASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISEL 293 (363)
Q Consensus 216 ~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~ 293 (363)
|-++.+|.+. .++...+.+....|..|.++||.|++.|+.-.+.++|.++++++.+|..|+||||||+.+|+...+..
T Consensus 117 HWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~ 196 (600)
T KOG0509|consen 117 HWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRR 196 (600)
T ss_pred hHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHH
Confidence 9998888654 46666778888899999999999999999999999999999999999999999999999999888999
Q ss_pred HHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 294 LVSKNADVNAKD-NEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 294 Ll~~gadin~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+..|+.++..| ..|.||||+|+..|+..++.+|++.|++.+..|.+|.||+++|.+.
T Consensus 197 LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 197 LLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 999999999888 8999999999999999999977788899999999999999999877
No 19
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.84 E-value=1.8e-21 Score=191.90 Aligned_cols=166 Identities=26% Similarity=0.323 Sum_probs=139.6
Q ss_pred HHhcCcccccccccc-ccccccccCCCCcchhhhhcCCC---CCcccccccccccccCCCCchHHHHHHHHcCCHHHHHH
Q 043342 185 AMQKYIDIVTELYPT-WAAGSSLKSKRGQEDAASTDSKA---PMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLK 260 (363)
Q Consensus 185 A~~~yv~~v~~Ll~~-~~~~~~~~~~~g~~~~~~a~~~~---~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~ 260 (363)
+..+-++.|+.+++. +... ...+++|.+.+|=++-+. .+..++++...........+.||||+|+++|+..++..
T Consensus 52 ~q~G~l~~v~~lve~~g~~v-~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~l 130 (600)
T KOG0509|consen 52 TQYGELETVKELVESEGESV-NNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDL 130 (600)
T ss_pred hhcchHHHHHHHHhhcCcCC-CCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHH
Confidence 345677888888876 4333 335568888887554443 34445555554444455788999999999999999999
Q ss_pred HHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-C
Q 043342 261 CIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKD-N 339 (363)
Q Consensus 261 LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d-~ 339 (363)
|+++|++++.+|..|.||||.|+..|+..++-+||.+|+++|.+|.+|+||||+|+..|....+..|++.|+.++.+| .
T Consensus 131 LlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~ 210 (600)
T KOG0509|consen 131 LLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDN 210 (600)
T ss_pred HHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999988999999999999998 8
Q ss_pred CCCcHHHHHhcC
Q 043342 340 DGNSPCHVCESD 351 (363)
Q Consensus 340 ~G~TpL~~A~~~ 351 (363)
.|+||||+|+-.
T Consensus 211 ~g~TpLHwa~~~ 222 (600)
T KOG0509|consen 211 HGNTPLHWAVVG 222 (600)
T ss_pred cCCchHHHHHhc
Confidence 999999999743
No 20
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.84 E-value=1.6e-20 Score=186.98 Aligned_cols=168 Identities=23% Similarity=0.309 Sum_probs=143.9
Q ss_pred HHHhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHcCCHHHHHHH
Q 043342 184 EAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKC 261 (363)
Q Consensus 184 ~A~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~L 261 (363)
.+..+.++.++.|+.............+.++++.+...+... .++...+.+.+..+..|.||||.|+..|+.+++++|
T Consensus 8 ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~L 87 (434)
T PHA02874 8 CIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLL 87 (434)
T ss_pred HHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 346678888999887655555556778899999888877543 233334455566778899999999999999999998
Q ss_pred HHcCC-----------------------CCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 043342 262 IENGV-----------------------SVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVC 318 (363)
Q Consensus 262 L~~g~-----------------------~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~ 318 (363)
+++|+ +++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 88 l~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~ 167 (434)
T PHA02874 88 IDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKH 167 (434)
T ss_pred HHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHC
Confidence 87664 4667888999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 319 DREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 319 g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
++.+++++|+++|++++.+|..|.||||+|+..
T Consensus 168 ~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~ 200 (434)
T PHA02874 168 NFFDIIKLLLEKGAYANVKDNNGESPLHNAAEY 200 (434)
T ss_pred CcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999876
No 21
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.84 E-value=1.1e-20 Score=198.36 Aligned_cols=180 Identities=15% Similarity=0.149 Sum_probs=125.6
Q ss_pred HHHHHhcCCCCHHHHHhc--CccccccccccccccccccCCCCcchhhhhcCCC---CCcccccccccccccCCCCchHH
Q 043342 171 WQAWQKLGAMPPEEAMQK--YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKA---PMGPVFSSFAYEEESGNDLKMDA 245 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A~~~--yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~---~~~~ll~~~~~~~~~~~~~g~t~ 245 (363)
.+..+..|.||++.|... ..+.++.|+..+.+.. ..+..+.++++.+...+ .+..++...+.+.+..+..|.||
T Consensus 300 in~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin-~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~Tp 378 (682)
T PHA02876 300 VNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVN-AADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTP 378 (682)
T ss_pred CCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCC-CcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCH
Confidence 344555666777665443 2455555555444332 34556666766655432 22233334455556677778888
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCC-HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHH
Q 043342 246 IHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGH-LNISELLVSKNADVNAKDNEGQTPLHYAVVCD-REAI 323 (363)
Q Consensus 246 Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~-~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g-~~~i 323 (363)
||+|+..|+.++++.|++.|++++..+..|.||||+|+..++ ..++++|++.|+++|.+|..|+||||+|+..+ +.++
T Consensus 379 Lh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~i 458 (682)
T PHA02876 379 IHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDV 458 (682)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHH
Confidence 888888888888888888888888888888888888876554 45678888888888888888888888888766 5788
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 324 AQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 324 v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+++|+++|++++.+|..|.||+++|+..
T Consensus 459 v~lLl~~Gad~n~~d~~g~tpl~~a~~~ 486 (682)
T PHA02876 459 IEMLLDNGADVNAINIQNQYPLLIALEY 486 (682)
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHh
Confidence 8888888888888888888888887653
No 22
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.84 E-value=9.5e-21 Score=200.23 Aligned_cols=186 Identities=28% Similarity=0.367 Sum_probs=161.3
Q ss_pred hhhhhhHHHHHhcCCCCHHHHHh-c-CccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCC
Q 043342 165 MTARAKWQAWQKLGAMPPEEAMQ-K-YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGND 240 (363)
Q Consensus 165 ~~~~ak~~aw~~~g~t~l~~A~~-~-yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~ 240 (363)
+.-.++.++...+|.|++|.|.. . |.+....++..+. ......+.|.|++++++..+.... ++............
T Consensus 427 l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~-~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~ 505 (1143)
T KOG4177|consen 427 LKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGA-DPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAK 505 (1143)
T ss_pred eccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCC-CcchhccccCcchhhhhccCCchHHHHhhhcCCccCccch
Confidence 34568889999999999998654 4 5666666665444 344577899999999998886553 33333334456677
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 043342 241 LKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR 320 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~ 320 (363)
.+.++||.+...+...+++.++++|++++.++..|+||||.||.+|+..+|++|+++|++++.+++.|+||||.||..|+
T Consensus 506 ~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~ 585 (1143)
T KOG4177|consen 506 KGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGH 585 (1143)
T ss_pred hccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcCh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 321 EAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 321 ~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.+|+.+|+++||++|..|.+|.|||++|.+.
T Consensus 586 ~~i~~LLlk~GA~vna~d~~g~TpL~iA~~l 616 (1143)
T KOG4177|consen 586 NDIAELLLKHGASVNAADLDGFTPLHIAVRL 616 (1143)
T ss_pred HHHHHHHHHcCCCCCcccccCcchhHHHHHh
Confidence 9999999999999999999999999999876
No 23
>PHA03095 ankyrin-like protein; Provisional
Probab=99.83 E-value=2.5e-20 Score=186.99 Aligned_cols=184 Identities=20% Similarity=0.177 Sum_probs=143.9
Q ss_pred hhhhHHHHHhcCCCCHHHHHh-c-CccccccccccccccccccCCCCcchhhhhcCCCC----CcccccccccccccCCC
Q 043342 167 ARAKWQAWQKLGAMPPEEAMQ-K-YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAP----MGPVFSSFAYEEESGND 240 (363)
Q Consensus 167 ~~ak~~aw~~~g~t~l~~A~~-~-yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~----~~~ll~~~~~~~~~~~~ 240 (363)
.++..+..+..|.||+|.|.. + ..++++.|+..+.+. ...+..|.|++|.+..... +..++...+.+.+..+.
T Consensus 72 ~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~i-n~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~ 150 (471)
T PHA03095 72 AGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADV-NAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDL 150 (471)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCC
Confidence 445666677788899998755 4 367888888776653 3356678888887763221 22334444556667778
Q ss_pred CchHHHHHHHHcC--CHHHHHHHHHcCCCCccCCCCCChHHHHHHHc--CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 043342 241 LKMDAIHAFAREG--DMDNLLKCIENGVSVNLRDSEGRAPLHWAVDR--GHLNISELLVSKNADVNAKDNEGQTPLHYAV 316 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g--~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~--g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~ 316 (363)
.|.||||+++..+ +.+++++|+++|++++..+..|.||||+++.. ++..+++.|++.|++++.+|..|+||||+|+
T Consensus 151 ~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa 230 (471)
T PHA03095 151 YGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMA 230 (471)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 8899999888865 57889999999988888888899999988864 6788899999999999999999999999999
Q ss_pred HcCCH--HHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 317 VCDRE--AIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 317 ~~g~~--~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
..|+. .+++.|+.+|++++.+|..|+||||+|+..
T Consensus 231 ~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~ 267 (471)
T PHA03095 231 TGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVF 267 (471)
T ss_pred hcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 88864 678889999999999999999999999874
No 24
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.83 E-value=3.1e-20 Score=167.13 Aligned_cols=138 Identities=20% Similarity=0.200 Sum_probs=116.3
Q ss_pred CCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcC--CHHHHHHHHHcCCCCccCCC-CCChHHHHHHHc-
Q 043342 210 RGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREG--DMDNLLKCIENGVSVNLRDS-EGRAPLHWAVDR- 285 (363)
Q Consensus 210 ~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g--~~~~v~~LL~~g~~vn~~d~-~g~TpLh~A~~~- 285 (363)
...+|++.+...+....+-.. ....+..+..|.||||+|+..+ +.+++++|+++|+++|.++. .|.||||+|+..
T Consensus 20 ~~~~pL~~A~~~~~~~~vk~L-i~~~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~ 98 (209)
T PHA02859 20 RYCNPLFYYVEKDDIEGVKKW-IKFVNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFN 98 (209)
T ss_pred ccCcHHHHHHHhCcHHHHHHH-HHhhhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhC
Confidence 456778888777765432221 2224556788999999999854 89999999999999999974 799999998764
Q ss_pred --CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 043342 286 --GHLNISELLVSKNADVNAKDNEGQTPLHYAVV--CDREAIAQFLVKQNADIGMKDNDGNSPCHVC 348 (363)
Q Consensus 286 --g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~--~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A 348 (363)
++.+++++|+++|+++|.+|..|.||||+|+. .++.+++++|+++|++++.+|.+|.||||.+
T Consensus 99 ~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~ 165 (209)
T PHA02859 99 KNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSY 165 (209)
T ss_pred ccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHH
Confidence 47999999999999999999999999999986 4689999999999999999999999999964
No 25
>PHA02741 hypothetical protein; Provisional
Probab=99.83 E-value=4.4e-20 Score=160.62 Aligned_cols=115 Identities=25% Similarity=0.378 Sum_probs=105.3
Q ss_pred cCCCCchHHHHHHHHcCCHHHHHHHHH------cCCCCccCCCCCChHHHHHHHcCC----HHHHHHHHhCCCCCCCCCC
Q 043342 237 SGNDLKMDAIHAFAREGDMDNLLKCIE------NGVSVNLRDSEGRAPLHWAVDRGH----LNISELLVSKNADVNAKDN 306 (363)
Q Consensus 237 ~~~~~g~t~Lh~Aa~~g~~~~v~~LL~------~g~~vn~~d~~g~TpLh~A~~~g~----~~iv~~Ll~~gadin~~d~ 306 (363)
..+..|.|+||+|++.|+.++++.|+. .|++++.+|..|.||||+|+..|+ .+++++|+..|+++|.++.
T Consensus 16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~ 95 (169)
T PHA02741 16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM 95 (169)
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence 456778999999999999999998854 357899999999999999999998 5889999999999999985
Q ss_pred -CCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHhcC
Q 043342 307 -EGQTPLHYAVVCDREAIAQFLVK-QNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 307 -~G~TpLh~A~~~g~~~iv~~Ll~-~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.|+||||+|+..++.+++++|+. .|++++.+|.+|+||||+|...
T Consensus 96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~ 142 (169)
T PHA02741 96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDN 142 (169)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHC
Confidence 99999999999999999999997 5999999999999999999865
No 26
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.83 E-value=2.6e-20 Score=195.53 Aligned_cols=181 Identities=20% Similarity=0.254 Sum_probs=151.9
Q ss_pred hhHHHHHhcCCCCHHHHHhc-Cc-cccccccccccccccccCCCCcchhhhhcCCCC---CcccccccccccccCCCCch
Q 043342 169 AKWQAWQKLGAMPPEEAMQK-YI-DIVTELYPTWAAGSSLKSKRGQEDAASTDSKAP---MGPVFSSFAYEEESGNDLKM 243 (363)
Q Consensus 169 ak~~aw~~~g~t~l~~A~~~-yv-~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~---~~~ll~~~~~~~~~~~~~g~ 243 (363)
+..+..+..|.||+|.|... .. .+++.|+..+.+. ...+..|.|+++.++..+. +..++...+.+.+..+..|.
T Consensus 264 ~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadi-n~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~ 342 (682)
T PHA02876 264 FSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYI 342 (682)
T ss_pred CCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCC
Confidence 34555667799999998653 43 5777777766543 3467789999998887663 22344455566677888999
Q ss_pred HHHHHHHHc-CCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-H
Q 043342 244 DAIHAFARE-GDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR-E 321 (363)
Q Consensus 244 t~Lh~Aa~~-g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~-~ 321 (363)
||||+|+.. ++.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ .
T Consensus 343 TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~ 422 (682)
T PHA02876 343 TPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPY 422 (682)
T ss_pred cHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHH
Confidence 999999985 47889999999999999999999999999999999999999999999999999999999999998765 4
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 322 AIAQFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 322 ~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
.++++|+++|++++.+|..|+||||+|+.
T Consensus 423 ~~vk~Ll~~gadin~~d~~G~TpLh~Aa~ 451 (682)
T PHA02876 423 MSVKTLIDRGANVNSKNKDLSTPLHYACK 451 (682)
T ss_pred HHHHHHHhCCCCCCcCCCCCChHHHHHHH
Confidence 67999999999999999999999999986
No 27
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.83 E-value=1.7e-20 Score=194.45 Aligned_cols=164 Identities=16% Similarity=0.178 Sum_probs=135.8
Q ss_pred hcCccccccccccc-cccccccCCCCcchhhhhcCCC----CCcccccccccccccCCCCchHHHHHHHHcCC--HHHHH
Q 043342 187 QKYIDIVTELYPTW-AAGSSLKSKRGQEDAASTDSKA----PMGPVFSSFAYEEESGNDLKMDAIHAFAREGD--MDNLL 259 (363)
Q Consensus 187 ~~yv~~v~~Ll~~~-~~~~~~~~~~g~~~~~~a~~~~----~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~--~~~v~ 259 (363)
....++++.|+..+ .+.....+..|.+++|.+.... .+..++...+.+.+..+..|.||||+|++.|+ .++++
T Consensus 152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVk 231 (764)
T PHA02716 152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIK 231 (764)
T ss_pred CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHH
Confidence 35778899999877 4433322678999999764332 12233444556677788899999999999995 48999
Q ss_pred HHHHcCCCCccCCCCCChHHHHH-------------------------------------HHcCCHHHHHHHHhCCCCCC
Q 043342 260 KCIENGVSVNLRDSEGRAPLHWA-------------------------------------VDRGHLNISELLVSKNADVN 302 (363)
Q Consensus 260 ~LL~~g~~vn~~d~~g~TpLh~A-------------------------------------~~~g~~~iv~~Ll~~gadin 302 (363)
+|+++|+++|.++..|+||||+| +..|+.+++++|++.|+++|
T Consensus 232 lLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN 311 (764)
T PHA02716 232 KIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLH 311 (764)
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee
Confidence 99999999999999999999975 34577899999999999999
Q ss_pred CCCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 303 AKDNEGQTPLHYAVV--CDREAIAQFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 303 ~~d~~G~TpLh~A~~--~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
.+|..|+||||+|+. .++.+++++|+++|++++.+|..|+||||+|+.
T Consensus 312 ~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~ 361 (764)
T PHA02716 312 YKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLS 361 (764)
T ss_pred ccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHH
Confidence 999999999999875 467899999999999999999999999999865
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.83 E-value=1.8e-20 Score=189.58 Aligned_cols=184 Identities=15% Similarity=0.161 Sum_probs=147.9
Q ss_pred hhhhhHHHHHhcCCCCHHHHHh----cCccccccccccccccccccCCCCcchhhhhcCC-----CCCcccccccccccc
Q 043342 166 TARAKWQAWQKLGAMPPEEAMQ----KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSK-----APMGPVFSSFAYEEE 236 (363)
Q Consensus 166 ~~~ak~~aw~~~g~t~l~~A~~----~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~-----~~~~~ll~~~~~~~~ 236 (363)
..++..+..+..|.||++.|.. +..++++.|+..+++....++..|.|++|.+... ..+..++.. +.+..
T Consensus 96 ~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~-Gadi~ 174 (494)
T PHA02989 96 KFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF-GVNLF 174 (494)
T ss_pred HCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCcc
Confidence 3456667777889999987643 4678999999988766455778899999865432 123333333 33333
Q ss_pred c-CCCCchHHHHHHHHcC----CHHHHHHHHHcCCCCccCCCCCChHHHHHHHc------CCHHHHHHHHhCCCCCCCCC
Q 043342 237 S-GNDLKMDAIHAFAREG----DMDNLLKCIENGVSVNLRDSEGRAPLHWAVDR------GHLNISELLVSKNADVNAKD 305 (363)
Q Consensus 237 ~-~~~~g~t~Lh~Aa~~g----~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~------g~~~iv~~Ll~~gadin~~d 305 (363)
. .+..|.||||.|++.+ +.+++++|+++|++++.++..+.|+||.++.. +...++++|+. |+++|.+|
T Consensus 175 ~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d 253 (494)
T PHA02989 175 EKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKD 253 (494)
T ss_pred ccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCC
Confidence 3 5678999999998764 89999999999999999998899999987654 34677777654 69999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 306 NEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 306 ~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+
T Consensus 254 ~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~ 299 (494)
T PHA02989 254 KKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKH 299 (494)
T ss_pred CCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999999999999999875
No 29
>cd00435 ACBP Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity. Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a role in regulation of intermediary metabolism and gene regulation. The suggested role of ACBP is to act as a intracellular acyl-CoA transporter and pool former. ACBPs are present in a large group of eukaryotic species and several tissue-specific isoforms have been detected.
Probab=99.83 E-value=4.5e-21 Score=146.54 Aligned_cols=84 Identities=44% Similarity=0.726 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCccc
Q 043342 113 LDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDI 192 (363)
Q Consensus 113 l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~~ 192 (363)
+++.|+.|+++|++.+ .+++++++|+||+||||||.|+|+.++|+++++.+++||++|.++++|+.++||..||++
T Consensus 1 ~~~~F~~A~~~v~~~~----~~~~~~~~L~lYalyKQAt~G~~~~~~P~~~d~~~~~K~~AW~~l~~ms~~eA~~~YV~~ 76 (85)
T cd00435 1 LQEEFEAAAEKVKKLK----TKPSNEEKLQLYSLYKQATVGDCNTERPGMFDLKGRAKWDAWNSLKGMSKEDAMKAYIAK 76 (85)
T ss_pred ChHHHHHHHHHHHhCC----CCcCHHHHHHHHHHHHHhccCCCCCCCCCcccHhhHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 4688999999998865 369999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 043342 193 VTELYPTW 200 (363)
Q Consensus 193 v~~Ll~~~ 200 (363)
+..+++.|
T Consensus 77 ~~~l~~~~ 84 (85)
T cd00435 77 VEELIAKY 84 (85)
T ss_pred HHHHhhcc
Confidence 99998865
No 30
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.82 E-value=7.2e-21 Score=181.12 Aligned_cols=176 Identities=22% Similarity=0.287 Sum_probs=139.8
Q ss_pred HhcCCCCHHH-HHhcCccccccccccccccccccC--------CCCcchhhhhcCCCCCc--ccccccccccccCCCCch
Q 043342 175 QKLGAMPPEE-AMQKYIDIVTELYPTWAAGSSLKS--------KRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKM 243 (363)
Q Consensus 175 ~~~g~t~l~~-A~~~yv~~v~~Ll~~~~~~~~~~~--------~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~ 243 (363)
...|.+|+-. |..++.++|.+|+.+......... -.|-.++-.++..|.++ .++.......+.......
T Consensus 39 ~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNS 118 (615)
T KOG0508|consen 39 VQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNS 118 (615)
T ss_pred ccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCC
Confidence 3557788775 566888999999875432222111 12334444555555433 233333355566666667
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 043342 244 DAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAI 323 (363)
Q Consensus 244 t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~i 323 (363)
|||..||..|+++++++|+++|+|++..|..|+|.||+||.+||.+|+++|++.|+|+|.++..|+|+||.|+..|+.++
T Consensus 119 tPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdi 198 (615)
T KOG0508|consen 119 TPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDI 198 (615)
T ss_pred ccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 324 AQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 324 v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+++|+++|+.+. +|..|-|||..|+..
T Consensus 199 vq~Ll~~ga~i~-~d~~GmtPL~~Aa~t 225 (615)
T KOG0508|consen 199 VQLLLKHGAKID-VDGHGMTPLLLAAVT 225 (615)
T ss_pred HHHHHhCCceee-ecCCCCchHHHHhhh
Confidence 999999999885 456699999988654
No 31
>PHA02917 ankyrin-like protein; Provisional
Probab=99.82 E-value=9.4e-20 Score=189.03 Aligned_cols=187 Identities=13% Similarity=0.120 Sum_probs=147.7
Q ss_pred HHHHhcCCCCHHHH----HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc-------ccccccccccccCCC
Q 043342 172 QAWQKLGAMPPEEA----MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG-------PVFSSFAYEEESGND 240 (363)
Q Consensus 172 ~aw~~~g~t~l~~A----~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~-------~ll~~~~~~~~~~~~ 240 (363)
++.++.|.+|+|.| ..++.++++.|+..+.+.. .++..|.||++.+...+... .++..... .+..+
T Consensus 26 ~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~-~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~-~n~~~- 102 (661)
T PHA02917 26 DTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPL-HKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGY-SNIND- 102 (661)
T ss_pred cccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCcc-ccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCC-CCCCC-
Confidence 45567899999974 2267899999999887665 47788999999888776532 12222221 22222
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHH--HcCCHHHHHHHHhCCCCCCCCCC---CC-------
Q 043342 241 LKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAV--DRGHLNISELLVSKNADVNAKDN---EG------- 308 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~--~~g~~~iv~~Ll~~gadin~~d~---~G------- 308 (363)
..+++|.|+..|+.+++++|+++|+++|.+|..|+||||+++ ..|+.+++++|+++|+++|.+|. .|
T Consensus 103 -~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~ 181 (661)
T PHA02917 103 -FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQ 181 (661)
T ss_pred -cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccc
Confidence 236778899999999999999999999999999999999654 57899999999999999987654 34
Q ss_pred ----CcHHHHHHH-----------cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcCc----hHHHHhccCC
Q 043342 309 ----QTPLHYAVV-----------CDREAIAQFLVKQNADIGMKDNDGNSPCHVCESDW----PWMLHAAKGT 362 (363)
Q Consensus 309 ----~TpLh~A~~-----------~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~~----~~~~~~~~~~ 362 (363)
.||||+|+. .++.+++++|+++|++++.+|.+|.||||+|+.+- +.++-+..|+
T Consensus 182 ~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~g~ 254 (661)
T PHA02917 182 PRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMKGI 254 (661)
T ss_pred ccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHhCC
Confidence 599999986 46889999999999999999999999999999652 4666555554
No 32
>PHA02946 ankyin-like protein; Provisional
Probab=99.82 E-value=7.7e-20 Score=182.41 Aligned_cols=161 Identities=16% Similarity=0.220 Sum_probs=137.4
Q ss_pred CccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHcCC--HHHHHHHHHc
Q 043342 189 YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAREGD--MDNLLKCIEN 264 (363)
Q Consensus 189 yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~--~~~v~~LL~~ 264 (363)
..++++.|+..+.+.. .++..|.|++|.++..+... .++...+.+.+..+..|.||||+|+..++ .+++++|+++
T Consensus 51 ~~~iv~~Ll~~Gadvn-~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~ 129 (446)
T PHA02946 51 DERFVEELLHRGYSPN-ETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQY 129 (446)
T ss_pred CHHHHHHHHHCcCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 4578889998877654 46788999999988877543 33334456667789999999999988664 7899999999
Q ss_pred CCCCcc-CCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC--HHHHHHHHhCCCCCCCCCCCC
Q 043342 265 GVSVNL-RDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR--EAIAQFLVKQNADIGMKDNDG 341 (363)
Q Consensus 265 g~~vn~-~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~--~~iv~~Ll~~Gad~~~~d~~G 341 (363)
|+++|. .+..|.|||| ||..++.+++++|++.|++++.+|..|+||||+|+..++ .+++++|+++|++++.+|.+|
T Consensus 130 Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G 208 (446)
T PHA02946 130 GAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDG 208 (446)
T ss_pred CCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCC
Confidence 999995 6889999998 667799999999999999999999999999999987654 689999999999999999999
Q ss_pred CcHHHHHhcC
Q 043342 342 NSPCHVCESD 351 (363)
Q Consensus 342 ~TpL~~A~~~ 351 (363)
.||||+|+.+
T Consensus 209 ~TpLH~Aa~~ 218 (446)
T PHA02946 209 NTPLHIVCSK 218 (446)
T ss_pred CCHHHHHHHc
Confidence 9999999964
No 33
>KOG0817 consensus Acyl-CoA-binding protein [Lipid transport and metabolism]
Probab=99.81 E-value=4.2e-20 Score=152.88 Aligned_cols=91 Identities=43% Similarity=0.736 Sum_probs=85.2
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCc
Q 043342 111 TELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYI 190 (363)
Q Consensus 111 ~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv 190 (363)
..+...|+.|+..++++++ +++++++|+||+||||||+|+|+.++|++|++.+|+||++|+++|+|+.++||+.|+
T Consensus 3 ~~~~~~Fe~a~~~~~~l~~----~p~~ee~L~lYglyKQAt~G~~~~~kPg~~d~~~k~Kw~AW~~l~~~s~~eA~~~Yv 78 (142)
T KOG0817|consen 3 ATLEAKFEAAAEAVKNLKK----KPSNEELLKLYGLYKQATVGDCNTPKPGFFDEEGKAKWQAWNSLGGMSKEEAMEAYV 78 (142)
T ss_pred chHHHHHHHHHHHHHhccc----CCCHHHHHHHHHHHHhhccCCCCCCCCchhhHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 4578999999999999875 499999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccc
Q 043342 191 DIVTELYPTWAAGSS 205 (363)
Q Consensus 191 ~~v~~Ll~~~~~~~~ 205 (363)
+++..|++.|.....
T Consensus 79 ~~~~~l~~~~~~~~~ 93 (142)
T KOG0817|consen 79 EKVEELIPKYGAEAE 93 (142)
T ss_pred HHHHHHHHHhhcccc
Confidence 999999999876554
No 34
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=6.2e-20 Score=165.34 Aligned_cols=127 Identities=28% Similarity=0.430 Sum_probs=118.3
Q ss_pred cccccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q 043342 225 GPVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAK 304 (363)
Q Consensus 225 ~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~ 304 (363)
..++.....+.+..|..|.+|||+||+.|+..+++.||.+|+.+|..+...-||||+|+..||.++|+.|+++.+|+|+.
T Consensus 17 rlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnav 96 (448)
T KOG0195|consen 17 RLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAV 96 (448)
T ss_pred EEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchh
Confidence 34555555667788899999999999999999999999999999999998999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 305 DNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 305 d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+..|+|||||||..|...|++-|+..||.+++.|++|.|||+.|-..
T Consensus 97 nehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~ 143 (448)
T KOG0195|consen 97 NEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPM 143 (448)
T ss_pred hccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchH
Confidence 99999999999999999999999999999999999999999988544
No 35
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.80 E-value=2.3e-19 Score=155.67 Aligned_cols=109 Identities=23% Similarity=0.335 Sum_probs=53.4
Q ss_pred chHHHHHHHHcCCH----HHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHH---HHHHHHhCCCCCCCCC-CCCCcHHH
Q 043342 242 KMDAIHAFAREGDM----DNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLN---ISELLVSKNADVNAKD-NEGQTPLH 313 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~----~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~---iv~~Ll~~gadin~~d-~~G~TpLh 313 (363)
+.++||.||+.|+. +++++|++.|..++.+|..|+||||+|+..|+.+ ++++|+..|+++|.+| ..|+||||
T Consensus 20 ~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh 99 (166)
T PHA02743 20 EQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLH 99 (166)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHH
Confidence 34455555555554 2333344444444545555555555555544432 2445555555555554 24555555
Q ss_pred HHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHhc
Q 043342 314 YAVVCDREAIAQFLVK-QNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 314 ~A~~~g~~~iv~~Ll~-~Gad~~~~d~~G~TpL~~A~~ 350 (363)
+|+..++.+++++|+. .|++++.+|..|.||||+|+.
T Consensus 100 ~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~ 137 (166)
T PHA02743 100 IAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYK 137 (166)
T ss_pred HHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHH
Confidence 5555555555555552 455555555555555555543
No 36
>PF00887 ACBP: Acyl CoA binding protein; InterPro: IPR000582 Acyl-CoA-binding protein (ACBP) is a small (10 Kd) protein that binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters []. ACBP is also known as diazepam binding inhibitor (DBI) or endozepine (EP) because of its ability to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor []. ACBP is a highly conserved protein of about 90 residues that is found in all four eukaryotic kingdoms, Animalia, Plantae, Fungi and Protista, and in some eubacterial species []. Although ACBP occurs as a completely independent protein, intact ACB domains have been identified in a number of large, multifunctional proteins in a variety of eukaryotic species. These include large membrane-associated proteins with N-terminal ACB domains, multifunctional enzymes with both ACB and peroxisomal enoyl-CoA Delta(3), Delta(2)-enoyl-CoA isomerase domains, and proteins with both an ACB domain and ankyrin repeats (IPR002110 from INTERPRO) []. The ACB domain consists of four alpha-helices arranged in a bowl shape with a highly exposed acyl-CoA-binding site. The ligand is bound through specific interactions with residues on the protein, most notably several conserved positive charges that interact with the phosphate group on the adenosine-3'phosphate moiety, and the acyl chain is sandwiched between the hydrophobic surfaces of CoA and the protein []. Other proteins containing an ACB domain include: Endozepine-like peptide (ELP) (gene DBIL5) from mouse []. ELP is a testis-specific ACBP homologue that may be involved in the energy metabolism of the mature sperm. MA-DBI, a transmembrane protein of unknown function which has been found in mammals. MA-DBI contains a N-terminal ACB domain. DRS-1 [], a human protein of unknown function that contains a N-terminal ACB domain and a C-terminal enoyl-CoA isomerase/hydratase domain. ; GO: 0000062 fatty-acyl-CoA binding; PDB: 2CB8_A 2FJ9_A 2LBB_A 1ST7_A 3EPY_B 2FDQ_C 1NTI_A 1HB8_A 1ACA_A 1NVL_A ....
Probab=99.80 E-value=2.3e-20 Score=144.21 Aligned_cols=86 Identities=48% Similarity=0.872 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCccc
Q 043342 113 LDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDI 192 (363)
Q Consensus 113 l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~~ 192 (363)
|++.|..|+.+|++.+.. ..++++++|+||||||||+.|+|+.++|+++++.+++||++|.++++|+.++||+.|+++
T Consensus 1 Le~~F~~A~~~v~~~~~~--~~~~~~~~L~LYalyKQAt~Gd~~~~~P~~~d~~~~~K~~AW~~l~gms~~eA~~~Yi~~ 78 (87)
T PF00887_consen 1 LEEEFEAAVEFVSNLPKK--SQLSNDDKLELYALYKQATHGDCDTPRPGFFDIEGRAKWDAWKALKGMSKEEAMREYIEL 78 (87)
T ss_dssp HHHHHHHHHHHHHHSSSC--STS-HHHHHHHHHHHHHHHTSS--S-CTTTTCHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcccc--CCCCHHHHHHHHHHHHHHHhCCCcCCCCcchhHHHHHHHHHHHHccCCCHHHHHHHHHHH
Confidence 689999999999987653 579999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 043342 193 VTELYPTW 200 (363)
Q Consensus 193 v~~Ll~~~ 200 (363)
+..++++|
T Consensus 79 v~~~~~~~ 86 (87)
T PF00887_consen 79 VEELIPKY 86 (87)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998754
No 37
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.79 E-value=1.2e-19 Score=182.55 Aligned_cols=213 Identities=20% Similarity=0.224 Sum_probs=156.6
Q ss_pred CCChhhHhHHhhhhhccccCCCCCCCCchhh---hhhhhhHHHHHhcCCCCHHHHHh-cCccccccccccccccccc---
Q 043342 134 KVSNDVQLQLYALYKIATEGPCSAPQPSALK---MTARAKWQAWQKLGAMPPEEAMQ-KYIDIVTELYPTWAAGSSL--- 206 (363)
Q Consensus 134 ~~~~~~~L~lyalykqAt~G~~~~~~p~~~~---~~~~ak~~aw~~~g~t~l~~A~~-~yv~~v~~Ll~~~~~~~~~--- 206 (363)
.++....--.|-++..+..|.-.... .+++ .......+..+..+.+|+|.|.+ +.++.++.++.++......
T Consensus 179 ~~~K~~~~~~~~iH~aa~s~s~e~mE-i~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~ 257 (929)
T KOG0510|consen 179 DPCKSDIDGNFPIHEAARSGSKECME-IFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLD 257 (929)
T ss_pred CCCcccCcCCchHHHHHHhcchhhhh-hhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhH
Confidence 34444443444455555555432211 1222 33445566777888899998766 5677777777766544332
Q ss_pred -----------cCCCCcchhhhhcCCCCCcc--cccccccccccCCCCchHHHHHHHHcCCHHHHHHHHH-cC-CCCccC
Q 043342 207 -----------KSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIE-NG-VSVNLR 271 (363)
Q Consensus 207 -----------~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~-~g-~~vn~~ 271 (363)
.+.+|.||+|.+++.|..+. ++...+...+.++.++.||||.|+++|++..|+.||+ .+ ..+|..
T Consensus 258 ~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~ 337 (929)
T KOG0510|consen 258 AMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNES 337 (929)
T ss_pred HHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccc
Confidence 34578889998888886653 4555566667778888899999999999999999988 44 346778
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCC---CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 272 DSEGRAPLHWAVDRGHLNISELLVSKNADVN---AKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHV 347 (363)
Q Consensus 272 d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin---~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~ 347 (363)
|..|+||||+|+..||..+++.|+++|+..+ ..|.+|.||||+|+..|+..+|++|+.+||++..+|..|.|++++
T Consensus 338 D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 338 DLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred cccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence 8889999999999999999999999998876 458889999999999999999999999999999999999888884
No 38
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.79 E-value=9.8e-19 Score=164.40 Aligned_cols=108 Identities=21% Similarity=0.239 Sum_probs=101.4
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCccCC----CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHH
Q 043342 243 MDAIHAFAREGDMDNLLKCIENGVSVNLRD----SEGRAPLHWAVDRGHLNISELLVSKNADVNAK-DNEGQTPLHYAVV 317 (363)
Q Consensus 243 ~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d----~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~-d~~G~TpLh~A~~ 317 (363)
.++||.|++.|+.++++.|+++|+++|.++ ..|.||||+|+..++.+++++|+++|+++|.+ +..|.||||+|+.
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~ 113 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVL 113 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHH
Confidence 467888888899999999999999999874 58999999999999999999999999999986 4689999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 318 CDREAIAQFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 318 ~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
.++.+++++|+.+|++++.+|..|.||||+|+.
T Consensus 114 ~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~ 146 (300)
T PHA02884 114 HGCLKCLEILLSYGADINIQTNDMVTPIELALM 146 (300)
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999976
No 39
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.79 E-value=1.1e-19 Score=158.05 Aligned_cols=163 Identities=20% Similarity=0.199 Sum_probs=139.4
Q ss_pred cCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCC
Q 043342 188 KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVS 267 (363)
Q Consensus 188 ~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~ 267 (363)
..+..+..++.++..++. -+..++++.+.+.-+-.+........+..+..|..|.|||.+|++.|++++|++||+.|++
T Consensus 107 ~s~~k~sttltN~~rgne-vs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAd 185 (296)
T KOG0502|consen 107 GSVDKVSTTLTNGARGNE-VSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGAD 185 (296)
T ss_pred CCcceeeeeecccccCCc-cccccCChhhHHHHHHHHHHHHHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCC
Confidence 467777777777766655 3334555555444433444444555566788899999999999999999999999999999
Q ss_pred CccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 268 VNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHV 347 (363)
Q Consensus 268 vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~ 347 (363)
++...+...++|++|+..|..+||++||.++.|+|.-|.+|.|||-||++-++.+||+.|+..||+++..+..|++++++
T Consensus 186 p~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdl 265 (296)
T KOG0502|consen 186 PDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDL 265 (296)
T ss_pred hhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcC
Q 043342 348 CESD 351 (363)
Q Consensus 348 A~~~ 351 (363)
|+.-
T Consensus 266 AVal 269 (296)
T KOG0502|consen 266 AVAL 269 (296)
T ss_pred HHHh
Confidence 9754
No 40
>PHA02795 ankyrin-like protein; Provisional
Probab=99.79 E-value=4.7e-19 Score=173.12 Aligned_cols=178 Identities=14% Similarity=0.029 Sum_probs=140.7
Q ss_pred hhhHHHHHhcCCCCHHHHHhcCccccccccccccccc-----cccCCCCcchhhhhcC--CCC--CcccccccccccccC
Q 043342 168 RAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGS-----SLKSKRGQEDAASTDS--KAP--MGPVFSSFAYEEESG 238 (363)
Q Consensus 168 ~ak~~aw~~~g~t~l~~A~~~yv~~v~~Ll~~~~~~~-----~~~~~~g~~~~~~a~~--~~~--~~~ll~~~~~~~~~~ 238 (363)
+++.++....+ -.|...+.++++.|+..+.... -.+.....+.+|.+.. .+. +..++...+.+.+.
T Consensus 72 ~~~i~~~~~~~----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~- 146 (437)
T PHA02795 72 RDNIDQYIVDR----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK- 146 (437)
T ss_pred Ccchhhhhhhh----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC-
Confidence 34555555444 3466788899999999887644 0255667888886655 332 22333344444443
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCC-ccC-----CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSV-NLR-----DSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPL 312 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~v-n~~-----d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpL 312 (363)
..+.||||.|+..|+.+++++|+++|++. +.. +..+.|++|.|...++.+++++|+.+|+++|.+|..|+|||
T Consensus 147 -~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpL 225 (437)
T PHA02795 147 -IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLL 225 (437)
T ss_pred -CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHH
Confidence 23479999999999999999999999753 322 13478999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 313 HYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 313 h~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+.+
T Consensus 226 h~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~ 264 (437)
T PHA02795 226 YRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDR 264 (437)
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999999999864
No 41
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.78 E-value=5.9e-19 Score=148.32 Aligned_cols=141 Identities=20% Similarity=0.311 Sum_probs=116.2
Q ss_pred cCCCCCcccccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCC
Q 043342 219 DSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKN 298 (363)
Q Consensus 219 ~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 298 (363)
...+.+..+++......+.+|.++.||||.|+.+|++++++.|+..|++++.+...|+||||-||.-.+.+++.+||++|
T Consensus 74 nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhg 153 (228)
T KOG0512|consen 74 NRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHG 153 (228)
T ss_pred ccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhcc
Confidence 33445667777778888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCH-HHHHHHH-hCCCCCCCCCCCCCcHHHHHhcC--chHHHHhc
Q 043342 299 ADVNAKDNEGQTPLHYAVVCDRE-AIAQFLV-KQNADIGMKDNDGNSPCHVCESD--WPWMLHAA 359 (363)
Q Consensus 299 adin~~d~~G~TpLh~A~~~g~~-~iv~~Ll-~~Gad~~~~d~~G~TpL~~A~~~--~~~~~~~~ 359 (363)
+|||+......||||+|+.+.+. ..+.+|+ ..++++..++..+.||+++|-+- ...+-+..
T Consensus 154 aDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s~~lfe~~ 218 (228)
T KOG0512|consen 154 ADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMSHYLFEIV 218 (228)
T ss_pred CcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhhHHHHHHH
Confidence 99999988899999999987654 4555555 46788888999999999998765 34444433
No 42
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.78 E-value=1.6e-18 Score=134.19 Aligned_cols=89 Identities=35% Similarity=0.680 Sum_probs=83.4
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 043342 246 IHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQ 325 (363)
Q Consensus 246 Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~ 325 (363)
||+||+.|+.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 7999999999999999999988876 889999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCC
Q 043342 326 FLVKQNADIGMKD 338 (363)
Q Consensus 326 ~Ll~~Gad~~~~d 338 (363)
+|+++|++++.+|
T Consensus 77 ~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 77 LLLEHGADVNIRN 89 (89)
T ss_dssp HHHHTTT-TTSS-
T ss_pred HHHHcCCCCCCcC
Confidence 9999999999886
No 43
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.78 E-value=1.6e-18 Score=150.47 Aligned_cols=108 Identities=18% Similarity=0.184 Sum_probs=99.3
Q ss_pred ccCCCCchHHHHHHHHcCCHHH---HHHHHHcCCCCccCC-CCCChHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCc
Q 043342 236 ESGNDLKMDAIHAFAREGDMDN---LLKCIENGVSVNLRD-SEGRAPLHWAVDRGHLNISELLVS-KNADVNAKDNEGQT 310 (363)
Q Consensus 236 ~~~~~~g~t~Lh~Aa~~g~~~~---v~~LL~~g~~vn~~d-~~g~TpLh~A~~~g~~~iv~~Ll~-~gadin~~d~~G~T 310 (363)
+..+..|+||||+|+..|+.+. +++|++.|+++|.++ ..|.||||+|+..++.+++++|+. .|++++.+|..|.|
T Consensus 51 ~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~t 130 (166)
T PHA02743 51 HRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHET 130 (166)
T ss_pred hccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCC
Confidence 4567789999999999988654 789999999999998 489999999999999999999995 79999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q 043342 311 PLHYAVVCDREAIAQFLVKQNADIGMKDNDGNS 343 (363)
Q Consensus 311 pLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~T 343 (363)
|||+|+..++.+++++|+++|++++.++..|..
T Consensus 131 pL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 131 AYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS 163 (166)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence 999999999999999999999999999988753
No 44
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.78 E-value=8.3e-19 Score=176.44 Aligned_cols=184 Identities=23% Similarity=0.341 Sum_probs=109.8
Q ss_pred hhhhHHHHHhcCCCCHHHHHhc-CccccccccccccccccccCCCCcchhhhhcCCC---CCccccccccc----ccccC
Q 043342 167 ARAKWQAWQKLGAMPPEEAMQK-YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKA---PMGPVFSSFAY----EEESG 238 (363)
Q Consensus 167 ~~ak~~aw~~~g~t~l~~A~~~-yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~---~~~~ll~~~~~----~~~~~ 238 (363)
.++..+.-++.+.||+|.|... ..+..+.|+..+.+. ...+.++..+.|.++..+ .++..+...++ ..+..
T Consensus 143 ~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~-~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~ 221 (929)
T KOG0510|consen 143 YGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADP-CKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFD 221 (929)
T ss_pred hcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCC-CcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccc
Confidence 4477778888888898886654 445445555544443 335666777766555544 33333332222 22334
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCC---------------CccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVS---------------VNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNA 303 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~---------------vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~ 303 (363)
+..+.+|||.|+..|+.+.++.+|+.|.. +|..|.+|.||||+||+.|+.+.+..|+..|+++|.
T Consensus 222 ~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~ 301 (929)
T KOG0510|consen 222 NNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINS 301 (929)
T ss_pred cCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccc
Confidence 55566666666666666666666665421 133455666666666666666666666666666666
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHh-CC-CCCCCCCCCCCcHHHHHhcC
Q 043342 304 KDNEGQTPLHYAVVCDREAIAQFLVK-QN-ADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 304 ~d~~G~TpLh~A~~~g~~~iv~~Ll~-~G-ad~~~~d~~G~TpL~~A~~~ 351 (363)
++.++.||||.|+..|+.++|+.||+ .| ..+|..|..|.||||+|+++
T Consensus 302 kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~ 351 (929)
T KOG0510|consen 302 KNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKS 351 (929)
T ss_pred cCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhc
Confidence 66666666666666666666666665 33 34555666666666666544
No 45
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.78 E-value=2.2e-18 Score=159.77 Aligned_cols=213 Identities=20% Similarity=0.237 Sum_probs=117.5
Q ss_pred ccccccchHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhcccc-CCCCC-CCCchhh-----------hhhhhhH
Q 043342 105 WEGVESTELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATE-GPCSA-PQPSALK-----------MTARAKW 171 (363)
Q Consensus 105 ~e~~e~~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~-G~~~~-~~p~~~~-----------~~~~ak~ 171 (363)
-|..+.++|-+....|+..+.+...... .++.+++=.-|..-.+-.. -.|+. ..|-.+. -.-++-+
T Consensus 183 ~e~~~r~els~~l~~a~~~~~~si~~p~-alt~~~lk~a~~tv~~eW~~~a~~s~a~pe~V~~~l~~f~als~~lL~yvV 261 (452)
T KOG0514|consen 183 SEPRKRTELSQSLKSALKILNDSILKPL-ALTSQSLKSAKATVQHEWFTNSSTSSSDPEQVEDYLAYFEALSPPLLEYVV 261 (452)
T ss_pred ccchhhhHhhHHHHHHHHHHHHHhcCcc-cccHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHhcChHHHHHHh
Confidence 4666778899999999999988765422 3444443333332222111 11111 1221111 0111223
Q ss_pred HHHHhcCCCCHHHHHh-cCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHH
Q 043342 172 QAWQKLGAMPPEEAMQ-KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFA 250 (363)
Q Consensus 172 ~aw~~~g~t~l~~A~~-~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa 250 (363)
|--+..|+|.+|++.. .+.++|+.||. ...++.+..|.-|.||+.+++
T Consensus 262 NlaDsNGNTALHYsVSHaNF~VV~~LLD-------------------------------SgvC~VD~qNrAGYtpiMLaA 310 (452)
T KOG0514|consen 262 NLADSNGNTALHYAVSHANFDVVSILLD-------------------------------SGVCDVDQQNRAGYTPVMLAA 310 (452)
T ss_pred hhhcCCCCeeeeeeecccchHHHHHHhc-------------------------------cCcccccccccccccHHHHHH
Confidence 3334444444444322 33444444444 444555556666666666665
Q ss_pred Hc-----CCHHHHHHHHHcCCCCccCCC-CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 043342 251 RE-----GDMDNLLKCIENGVSVNLRDS-EGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIA 324 (363)
Q Consensus 251 ~~-----g~~~~v~~LL~~g~~vn~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv 324 (363)
.. .+..+|..|+..| ++|.+-. .|+|+|++|+.+|+.++++.||..|+|||.+|.+|.|+|+.||.+||.+|+
T Consensus 311 LA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEiv 389 (452)
T KOG0514|consen 311 LAKLKQPADRTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIV 389 (452)
T ss_pred HHhhcchhhHHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHH
Confidence 43 2345566666555 5665544 366666666666666666666666666666666666666666666666666
Q ss_pred HHHHhC-CCCCCCCCCCCCcHHHHHhc
Q 043342 325 QFLVKQ-NADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 325 ~~Ll~~-Gad~~~~d~~G~TpL~~A~~ 350 (363)
++||.. ++|+...|.+|.|+|.+|-.
T Consensus 390 klLLA~p~cd~sLtD~DgSTAl~IAle 416 (452)
T KOG0514|consen 390 KLLLAVPSCDISLTDVDGSTALSIALE 416 (452)
T ss_pred HHHhccCcccceeecCCCchhhhhHHh
Confidence 666643 56666666666666666643
No 46
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.77 E-value=2.4e-18 Score=174.12 Aligned_cols=167 Identities=16% Similarity=0.149 Sum_probs=100.1
Q ss_pred hhHHHHHhcCCCCHHHH-Hhc--CccccccccccccccccccCCCCcchhhhhcCCCC--------Cccccccccccccc
Q 043342 169 AKWQAWQKLGAMPPEEA-MQK--YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAP--------MGPVFSSFAYEEES 237 (363)
Q Consensus 169 ak~~aw~~~g~t~l~~A-~~~--yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~--------~~~ll~~~~~~~~~ 237 (363)
+..+.. ..|.++++.+ ... ..++++.|+..+++.... . .+.||++.+...+. +..++...+.+.+.
T Consensus 27 advN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~-~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~ 103 (494)
T PHA02989 27 FDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYK-G-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINL 103 (494)
T ss_pred CCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCC-C-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCC
Confidence 344443 3455666542 222 356777777766544321 1 34566665433221 11233334445556
Q ss_pred CCCCchHHHHHHHHc---CCHHHHHHHHHcCCCC-ccCCCCCChHHHHHHHc--CCHHHHHHHHhCCCCCCC-CCCCCCc
Q 043342 238 GNDLKMDAIHAFARE---GDMDNLLKCIENGVSV-NLRDSEGRAPLHWAVDR--GHLNISELLVSKNADVNA-KDNEGQT 310 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~---g~~~~v~~LL~~g~~v-n~~d~~g~TpLh~A~~~--g~~~iv~~Ll~~gadin~-~d~~G~T 310 (363)
.+..|.||||.|+.. |+.+++++|+++|+++ +.+|..|+||||+|+.. ++.+++++|+++|++++. .+..|.|
T Consensus 104 ~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~t 183 (494)
T PHA02989 104 KTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLT 183 (494)
T ss_pred CCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCC
Confidence 666677777766654 4667777777777777 66777777777776543 467777777777777776 5667777
Q ss_pred HHHHHHHcC----CHHHHHHHHhCCCCCCCCC
Q 043342 311 PLHYAVVCD----REAIAQFLVKQNADIGMKD 338 (363)
Q Consensus 311 pLh~A~~~g----~~~iv~~Ll~~Gad~~~~d 338 (363)
|||+|+..+ +.+++++|+++|++++.+|
T Consensus 184 pL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~ 215 (494)
T PHA02989 184 PMNIYLRNDIDVISIKVIKYLIKKGVNIETNN 215 (494)
T ss_pred hHHHHHhcccccccHHHHHHHHhCCCCccccC
Confidence 777776543 6677777777766655443
No 47
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.77 E-value=8.8e-19 Score=185.47 Aligned_cols=190 Identities=26% Similarity=0.301 Sum_probs=161.9
Q ss_pred chhhhhhhhhHHHHHhcCCCCHHHHH-hcCccccccccccccccccccCCCCcchhhhhcCCCCCccccccc--cccccc
Q 043342 161 SALKMTARAKWQAWQKLGAMPPEEAM-QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSF--AYEEES 237 (363)
Q Consensus 161 ~~~~~~~~ak~~aw~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~--~~~~~~ 237 (363)
.+.....+...++-.+.|.|+++.|. .+..+.+.-++..|. ......+.+.++++.+...+.+......+ ......
T Consensus 457 ~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~-~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~ 535 (1143)
T KOG4177|consen 457 ARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGA-NDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDL 535 (1143)
T ss_pred hhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCC-ccCccchhccchhhhhhhhhhHHHHHHHhhcCCceeh
Confidence 34445566778888899999999864 566777777777663 34446788899999888887665444444 445566
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 043342 238 GNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVV 317 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~ 317 (363)
++..|.||||.||.+|+..+|++||++|++++.++..|+||||.||..|+.+|+.+|+++|+++|..|.+|.||||+|+.
T Consensus 536 ~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~ 615 (1143)
T KOG4177|consen 536 RTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVR 615 (1143)
T ss_pred hcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHH
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCC-----CCCCCCCCCcHHHHHhcC
Q 043342 318 CDREAIAQFLVKQNAD-----IGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 318 ~g~~~iv~~Ll~~Gad-----~~~~d~~G~TpL~~A~~~ 351 (363)
.|+.+++++|+..++. ....+..|.+|..++..-
T Consensus 616 lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~ 654 (1143)
T KOG4177|consen 616 LGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEEL 654 (1143)
T ss_pred hcccchhhHHHhccCccccccchhhhhcccChhhHHHHh
Confidence 9999999999999998 778889999999887543
No 48
>PHA02798 ankyrin-like protein; Provisional
Probab=99.76 E-value=2.3e-18 Score=174.10 Aligned_cols=162 Identities=21% Similarity=0.214 Sum_probs=132.6
Q ss_pred CccccccccccccccccccCCCCcchhhhhcCC-------CCCcccccccccccccCCCCchHHHHHHHHcC---CHHHH
Q 043342 189 YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSK-------APMGPVFSSFAYEEESGNDLKMDAIHAFAREG---DMDNL 258 (363)
Q Consensus 189 yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~-------~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g---~~~~v 258 (363)
..++++.|+..+.+... .+..|.||++.+... ..+..++...+.+.+..+..|.||||+|+..+ +.+++
T Consensus 50 ~~~iv~~Ll~~Gadvn~-~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv 128 (489)
T PHA02798 50 STDIVKLFINLGANVNG-LDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEIL 128 (489)
T ss_pred CHHHHHHHHHCCCCCCC-CCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHH
Confidence 57889999998775543 567888999865432 12334444556677888889999999999976 78999
Q ss_pred HHHHHcCCCCccCCCCCChHHHHHHHcCC---HHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHc----CCHHHHHHHHhC
Q 043342 259 LKCIENGVSVNLRDSEGRAPLHWAVDRGH---LNISELLVSKNADVNAKD-NEGQTPLHYAVVC----DREAIAQFLVKQ 330 (363)
Q Consensus 259 ~~LL~~g~~vn~~d~~g~TpLh~A~~~g~---~~iv~~Ll~~gadin~~d-~~G~TpLh~A~~~----g~~~iv~~Ll~~ 330 (363)
++|+++|++++.+|..|.||||+|+..++ .+++++|+++|+++|.++ ..|.||||.++.. ++.+++++|+++
T Consensus 129 ~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~ 208 (489)
T PHA02798 129 LFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDN 208 (489)
T ss_pred HHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHC
Confidence 99999999999999999999999999988 999999999999999885 5789999998764 468888888887
Q ss_pred CCC---------------------------------------CCCCCCCCCcHHHHHhcC
Q 043342 331 NAD---------------------------------------IGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 331 Gad---------------------------------------~~~~d~~G~TpL~~A~~~ 351 (363)
|++ +|.+|..|+||||+|+..
T Consensus 209 Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~ 268 (489)
T PHA02798 209 GFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSH 268 (489)
T ss_pred CCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHc
Confidence 764 455677899999999854
No 49
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.76 E-value=1.7e-18 Score=148.19 Aligned_cols=114 Identities=22% Similarity=0.287 Sum_probs=79.8
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCC-----CccCCCCCChHHHHHHHcCCH---HHHHHHHhCCCCCCCCC-CCC
Q 043342 238 GNDLKMDAIHAFAREGDMDNLLKCIENGVS-----VNLRDSEGRAPLHWAVDRGHL---NISELLVSKNADVNAKD-NEG 308 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~-----vn~~d~~g~TpLh~A~~~g~~---~iv~~Ll~~gadin~~d-~~G 308 (363)
.+..|.||||+||+.|+...+........+ ++.+|..|.||||+|+..|+. +++++|++.|+++|.++ ..|
T Consensus 13 ~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g 92 (154)
T PHA02736 13 PDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFG 92 (154)
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCC
Confidence 455678888888888873222111111111 234577788888888887765 35777888888888877 478
Q ss_pred CcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHhcC
Q 043342 309 QTPLHYAVVCDREAIAQFLVK-QNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 309 ~TpLh~A~~~g~~~iv~~Ll~-~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+||||+|+..++.+++++|+. .|++++.+|..|.||||+|+..
T Consensus 93 ~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~ 136 (154)
T PHA02736 93 NTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACER 136 (154)
T ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHc
Confidence 888888888888888888886 4788888888888888888754
No 50
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.76 E-value=3.6e-18 Score=182.55 Aligned_cols=167 Identities=17% Similarity=0.146 Sum_probs=138.9
Q ss_pred CCHHH-HHhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHcCCHH
Q 043342 180 MPPEE-AMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAREGDMD 256 (363)
Q Consensus 180 t~l~~-A~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~ 256 (363)
.+++. |..++.++++.|+..+.+.. ..+..|.|++|.++..+... .++...+.+.+..+..|.||||+|+..|+.+
T Consensus 527 ~~L~~Aa~~g~~~~l~~Ll~~G~d~n-~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~ 605 (823)
T PLN03192 527 SNLLTVASTGNAALLEELLKAKLDPD-IGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHK 605 (823)
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence 44554 56678888999988776544 46778899999888887544 2333445666778888999999999999999
Q ss_pred HHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 043342 257 NLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGM 336 (363)
Q Consensus 257 ~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~ 336 (363)
+++.|+..+...+. ..+.++||+|+..|+.++++.|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|++++.
T Consensus 606 iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~ 683 (823)
T PLN03192 606 IFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDK 683 (823)
T ss_pred HHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC
Confidence 99999987765443 3467899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-CcHHHHHh
Q 043342 337 KDNDG-NSPCHVCE 349 (363)
Q Consensus 337 ~d~~G-~TpL~~A~ 349 (363)
+|..| .||++++.
T Consensus 684 ~~~~g~~t~~~l~~ 697 (823)
T PLN03192 684 ANTDDDFSPTELRE 697 (823)
T ss_pred CCCCCCCCHHHHHH
Confidence 99988 99998774
No 51
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.76 E-value=6.5e-19 Score=167.87 Aligned_cols=149 Identities=23% Similarity=0.281 Sum_probs=126.5
Q ss_pred CCCcchhhhhcCCCCCc---cccccccccccc--------CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCCh
Q 043342 209 KRGQEDAASTDSKAPMG---PVFSSFAYEEES--------GNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRA 277 (363)
Q Consensus 209 ~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~--------~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~T 277 (363)
.+|.+|+.+++..|... .++.......+. ..-.|-+||-.|+..|++++|+.|+.+|+++|.......|
T Consensus 40 ~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNSt 119 (615)
T KOG0508|consen 40 QNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNST 119 (615)
T ss_pred cCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCc
Confidence 45567888888887543 333333322222 2345788999999999999999999999999999988999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC--chHH
Q 043342 278 PLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD--WPWM 355 (363)
Q Consensus 278 pLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~--~~~~ 355 (363)
||--||..|+++++++|+++|+|++..|..|.|.||+||..|+.+|+++|++.|||+|.++..|+|+||.|++. .+-+
T Consensus 120 PLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdiv 199 (615)
T KOG0508|consen 120 PLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIV 199 (615)
T ss_pred cHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999854 4444
Q ss_pred HH
Q 043342 356 LH 357 (363)
Q Consensus 356 ~~ 357 (363)
+.
T Consensus 200 q~ 201 (615)
T KOG0508|consen 200 QL 201 (615)
T ss_pred HH
Confidence 43
No 52
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.76 E-value=1.6e-18 Score=145.68 Aligned_cols=108 Identities=29% Similarity=0.412 Sum_probs=103.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCC-CccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q 043342 244 DAIHAFAREGDMDNLLKCIENGVS-VNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREA 322 (363)
Q Consensus 244 t~Lh~Aa~~g~~~~v~~LL~~g~~-vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~ 322 (363)
-.+.+|+..+.+..|+.||+..++ +|.+|.+|+||||-|+++||.+|++.|+..|++++++...||||||.||..++.+
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence 457788999999999999998777 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 323 IAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 323 iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+-+||++|+|+|+......||||+|+.+
T Consensus 145 va~~LLqhgaDVnA~t~g~ltpLhlaa~~ 173 (228)
T KOG0512|consen 145 VAGRLLQHGADVNAQTKGLLTPLHLAAGN 173 (228)
T ss_pred HHHHHHhccCcccccccccchhhHHhhcc
Confidence 99999999999999999999999999866
No 53
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.75 E-value=1.6e-18 Score=148.28 Aligned_cols=100 Identities=18% Similarity=0.234 Sum_probs=92.1
Q ss_pred cCCCCchHHHHHHHHcCCH---HHHHHHHHcCCCCccCCC-CCChHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcH
Q 043342 237 SGNDLKMDAIHAFAREGDM---DNLLKCIENGVSVNLRDS-EGRAPLHWAVDRGHLNISELLVS-KNADVNAKDNEGQTP 311 (363)
Q Consensus 237 ~~~~~g~t~Lh~Aa~~g~~---~~v~~LL~~g~~vn~~d~-~g~TpLh~A~~~g~~~iv~~Ll~-~gadin~~d~~G~Tp 311 (363)
..+..|.||||+|+..|+. +++++|++.|+++|.++. .|.||||+|+..++.+++++|+. .|++++.+|..|+||
T Consensus 50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tp 129 (154)
T PHA02736 50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTP 129 (154)
T ss_pred HhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCH
Confidence 3577899999999999987 468899999999999984 89999999999999999999997 499999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCC
Q 043342 312 LHYAVVCDREAIAQFLVKQNADIGM 336 (363)
Q Consensus 312 Lh~A~~~g~~~iv~~Ll~~Gad~~~ 336 (363)
||+|+..|+.+++++|+++|+++++
T Consensus 130 L~~A~~~~~~~i~~~Ll~~ga~~~~ 154 (154)
T PHA02736 130 YYVACERHDAKMMNILRAKGAQCKV 154 (154)
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999999998753
No 54
>PHA02795 ankyrin-like protein; Provisional
Probab=99.75 E-value=2.3e-18 Score=168.30 Aligned_cols=164 Identities=18% Similarity=0.055 Sum_probs=133.8
Q ss_pred HHHhcCCCCHHHHHh---cCccccccccccccccccccCCCCcchhhhhcCCC---CCcccccccccccccC-----CCC
Q 043342 173 AWQKLGAMPPEEAMQ---KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKA---PMGPVFSSFAYEEESG-----NDL 241 (363)
Q Consensus 173 aw~~~g~t~l~~A~~---~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~---~~~~ll~~~~~~~~~~-----~~~ 241 (363)
.....+.+++|.++. +++++++.|+.++++.. .+++.++++.+...+ .+..+++......+.. +..
T Consensus 111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn---~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~ 187 (437)
T PHA02795 111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIY---KIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKII 187 (437)
T ss_pred hccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCC---CCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhh
Confidence 455667889998765 78999999999776553 355678888777544 2333333332222222 134
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-
Q 043342 242 KMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR- 320 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~- 320 (363)
+.+++|.++..++.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~ 267 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSV 267 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCc
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred -------HHHHHHHHhCCCCCCCCCC
Q 043342 321 -------EAIAQFLVKQNADIGMKDN 339 (363)
Q Consensus 321 -------~~iv~~Ll~~Gad~~~~d~ 339 (363)
.+++++|+++|++++....
T Consensus 268 ~~~~~~~~eIvelLL~~gadI~~~~~ 293 (437)
T PHA02795 268 IARRETHLKILEILLREPLSIDCIKL 293 (437)
T ss_pred ccccccHHHHHHHHHhCCCCCCchhH
Confidence 6999999999999987654
No 55
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.73 E-value=2.1e-17 Score=176.58 Aligned_cols=139 Identities=17% Similarity=0.224 Sum_probs=113.8
Q ss_pred CcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCH
Q 043342 211 GQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHL 288 (363)
Q Consensus 211 g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~ 288 (363)
..++++.++..+... ..+...+.+.+..|..|.||||+|+..|+.++++.|+++|+++|.+|..|.||||+|+..|+.
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~ 604 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHH 604 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence 345566666555432 222233455677788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 289 NISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 289 ~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+++++|+..++..+. ..|.++||+|+..|+.+++++|+++|+++|.+|.+|+||||+|+.+
T Consensus 605 ~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~ 665 (823)
T PLN03192 605 KIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAE 665 (823)
T ss_pred HHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 999999887766543 4567899999999999999999999999999999999999999876
No 56
>COG4281 ACB Acyl-CoA-binding protein [Lipid metabolism]
Probab=99.71 E-value=1e-17 Score=120.28 Aligned_cols=82 Identities=35% Similarity=0.528 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCccc
Q 043342 113 LDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDI 192 (363)
Q Consensus 113 l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~~ 192 (363)
+..+|++|..-|+.++. +|+++++|+||+||||+++|+.+..+|++|++.+++||+||..+.+.+.++|.++|+.+
T Consensus 2 ~s~~Feqa~~dV~~L~~----kP~~d~LLkLYAL~KQ~s~GD~~~ekPG~~d~~gr~K~eAW~~LKGksqedA~qeYial 77 (87)
T COG4281 2 LSTRFEQAQTDVKELSE----KPSNDELLKLYALFKQGSVGDNDGEKPGFFDIVGRYKYEAWAGLKGKSQEDARQEYIAL 77 (87)
T ss_pred hhhHHHHHHHHHHHhcc----CCCcHHHHHHHHHHHhccccccCCCCCCccccccchhHHHHhhccCccHHHHHHHHHHH
Confidence 56789999999998764 69999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 043342 193 VTELYP 198 (363)
Q Consensus 193 v~~Ll~ 198 (363)
|.+|..
T Consensus 78 VeeLka 83 (87)
T COG4281 78 VEELKA 83 (87)
T ss_pred HHHHHh
Confidence 998864
No 57
>PHA02730 ankyrin-like protein; Provisional
Probab=99.71 E-value=4.5e-17 Score=166.37 Aligned_cols=118 Identities=17% Similarity=0.176 Sum_probs=101.7
Q ss_pred ccccccCCCCchHHHHHHHHcCC----HHHHHHHHHcCC--CCccCCCCCChHHHH---HHHcC---------CHHHHHH
Q 043342 232 AYEEESGNDLKMDAIHAFAREGD----MDNLLKCIENGV--SVNLRDSEGRAPLHW---AVDRG---------HLNISEL 293 (363)
Q Consensus 232 ~~~~~~~~~~g~t~Lh~Aa~~g~----~~~v~~LL~~g~--~vn~~d~~g~TpLh~---A~~~g---------~~~iv~~ 293 (363)
+.+.+.. ..|.||||+|+..++ .+++++|+++|+ ++|.+|..|.||||. |...+ ..+++++
T Consensus 369 GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~ 447 (672)
T PHA02730 369 GATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDI 447 (672)
T ss_pred CCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHH
Confidence 3444443 678999999998875 899999999987 689999999999994 33232 2357999
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHhc
Q 043342 294 LVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDN-DGNSPCHVCES 350 (363)
Q Consensus 294 Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~-~G~TpL~~A~~ 350 (363)
|+.+|+++|.+|..|+||||+|+..++.+++++|+++||+++.+|. .|.||||+|+.
T Consensus 448 LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 448 LSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSY 505 (672)
T ss_pred HHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999997 59999999974
No 58
>PHA02741 hypothetical protein; Provisional
Probab=99.70 E-value=8.2e-17 Score=140.05 Aligned_cols=100 Identities=23% Similarity=0.320 Sum_probs=92.0
Q ss_pred cccCCCCchHHHHHHHHcCC----HHHHHHHHHcCCCCccCCC-CCChHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCC
Q 043342 235 EESGNDLKMDAIHAFAREGD----MDNLLKCIENGVSVNLRDS-EGRAPLHWAVDRGHLNISELLVS-KNADVNAKDNEG 308 (363)
Q Consensus 235 ~~~~~~~g~t~Lh~Aa~~g~----~~~v~~LL~~g~~vn~~d~-~g~TpLh~A~~~g~~~iv~~Ll~-~gadin~~d~~G 308 (363)
.+..+..|.||||+|+..|+ .+++++|+..|+++|.++. .|.||||+|+..++.+++++|+. .|++++.+|..|
T Consensus 53 in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g 132 (169)
T PHA02741 53 LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADN 132 (169)
T ss_pred hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCC
Confidence 35667789999999999998 5889999999999999985 89999999999999999999997 599999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCC
Q 043342 309 QTPLHYAVVCDREAIAQFLVKQNADI 334 (363)
Q Consensus 309 ~TpLh~A~~~g~~~iv~~Ll~~Gad~ 334 (363)
+||||+|+..++.+++++|+++++..
T Consensus 133 ~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 133 KSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999987654
No 59
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.70 E-value=3e-17 Score=152.21 Aligned_cols=119 Identities=24% Similarity=0.353 Sum_probs=106.1
Q ss_pred ccccccCCCCchHHHHHHHHcCCHHHHHHHHHcC-CCCccCCCCCChHHHHHHHc-----CCHHHHHHHHhCCCCCCCCC
Q 043342 232 AYEEESGNDLKMDAIHAFAREGDMDNLLKCIENG-VSVNLRDSEGRAPLHWAVDR-----GHLNISELLVSKNADVNAKD 305 (363)
Q Consensus 232 ~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g-~~vn~~d~~g~TpLh~A~~~-----g~~~iv~~Ll~~gadin~~d 305 (363)
.+..+..|..|+|+|||++.++++++|+.||+.| ++++.++.-|+||+++++.. .+..+|..|...| +||++-
T Consensus 258 ~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKA 336 (452)
T KOG0514|consen 258 EYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKA 336 (452)
T ss_pred HHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhh
Confidence 3445667888999999999999999999999998 77999999999999998853 4577888887664 677764
Q ss_pred -CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 306 -NEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 306 -~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
..|+|+|++|+.+|+.++|+.||..|||+|++|.+|.|+|++|+++
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EH 383 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEH 383 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhh
Confidence 5799999999999999999999999999999999999999999987
No 60
>PHA02917 ankyrin-like protein; Provisional
Probab=99.70 E-value=4.3e-17 Score=169.25 Aligned_cols=180 Identities=16% Similarity=0.123 Sum_probs=132.7
Q ss_pred hhhhhHHHHHhcCCCCHHHHHh-cCcc----ccccccccccccccccCCCCcchhhhhcCCCC--CcccccccccccccC
Q 043342 166 TARAKWQAWQKLGAMPPEEAMQ-KYID----IVTELYPTWAAGSSLKSKRGQEDAASTDSKAP--MGPVFSSFAYEEESG 238 (363)
Q Consensus 166 ~~~ak~~aw~~~g~t~l~~A~~-~yv~----~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~--~~~ll~~~~~~~~~~ 238 (363)
...+..+..+..|.||++.|.. ++++ +++.|+..... ...+ +.....+.++..+. +..++...+.+.+..
T Consensus 56 ~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~-~n~~--~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~ 132 (661)
T PHA02917 56 DSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGY-SNIN--DFNIFSYMKSKNVDVDLIKVLVEHGFDLSVK 132 (661)
T ss_pred HCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCC-CCCC--CcchHHHHHhhcCCHHHHHHHHHcCCCCCcc
Confidence 4456667778889999998754 4433 34555543221 1112 22233334444432 223444556777788
Q ss_pred CCCchHHHHHHH--HcCCHHHHHHHHHcCCCCccCCC---CC-----------ChHHHHHHH-----------cCCHHHH
Q 043342 239 NDLKMDAIHAFA--REGDMDNLLKCIENGVSVNLRDS---EG-----------RAPLHWAVD-----------RGHLNIS 291 (363)
Q Consensus 239 ~~~g~t~Lh~Aa--~~g~~~~v~~LL~~g~~vn~~d~---~g-----------~TpLh~A~~-----------~g~~~iv 291 (363)
+..|+||||.++ ..|+.+++++|+++|+++|.+|. .| .||||+|+. .++.+++
T Consensus 133 d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv 212 (661)
T PHA02917 133 CENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVV 212 (661)
T ss_pred CCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHH
Confidence 889999999654 47899999999999999986653 34 599999986 4689999
Q ss_pred HHHHhCCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHHhCCCCCC----CCCCCCCcHHHHHh
Q 043342 292 ELLVSKNADVNAKDNEGQTPLHYAVVCDRE--AIAQFLVKQNADIG----MKDNDGNSPCHVCE 349 (363)
Q Consensus 292 ~~Ll~~gadin~~d~~G~TpLh~A~~~g~~--~iv~~Ll~~Gad~~----~~d~~G~TpL~~A~ 349 (363)
++|++.|+++|.+|..|+||||+|+..|+. ++|++|++ |++++ ..|..|.||+++|+
T Consensus 213 ~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~ 275 (661)
T PHA02917 213 KCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMAD 275 (661)
T ss_pred HHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHH
Confidence 999999999999999999999999999985 79999985 88775 46677888888887
No 61
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.70 E-value=6.4e-18 Score=179.03 Aligned_cols=174 Identities=19% Similarity=0.234 Sum_probs=132.0
Q ss_pred HHHhcCCCCHH-HHHhc-CccccccccccccccccccCCCCcchhhhhcCC--CCCcccccccccc-------------c
Q 043342 173 AWQKLGAMPPE-EAMQK-YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSK--APMGPVFSSFAYE-------------E 235 (363)
Q Consensus 173 aw~~~g~t~l~-~A~~~-yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~--~~~~~ll~~~~~~-------------~ 235 (363)
.-+..|.++++ .|..+ +.++++.|+..+. .+..|.+++|.+... +.+..++...... .
T Consensus 47 ~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~ 121 (743)
T TIGR00870 47 CPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQY 121 (743)
T ss_pred CcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhcccc
Confidence 34456889999 67665 4566666665433 566788999877652 2222222221111 1
Q ss_pred ccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCC--------------CCCChHHHHHHHcCCHHHHHHHHhCCCCC
Q 043342 236 ESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRD--------------SEGRAPLHWAVDRGHLNISELLVSKNADV 301 (363)
Q Consensus 236 ~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d--------------~~g~TpLh~A~~~g~~~iv~~Ll~~gadi 301 (363)
......|.||||+||..|+.++++.|+++|++++.++ ..|.||||+|+..|+.+++++|+++|+++
T Consensus 122 ~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi 201 (743)
T TIGR00870 122 TSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI 201 (743)
T ss_pred ccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch
Confidence 1123568999999999999999999999999998653 25899999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHcC---------CHHHHHHHHhCCCCC-------CCCCCCCCcHHHHHhcC
Q 043342 302 NAKDNEGQTPLHYAVVCD---------REAIAQFLVKQNADI-------GMKDNDGNSPCHVCESD 351 (363)
Q Consensus 302 n~~d~~G~TpLh~A~~~g---------~~~iv~~Ll~~Gad~-------~~~d~~G~TpL~~A~~~ 351 (363)
|.+|..|+||||+|+..+ ...+.++++..++.. ++.|.+|.||||+|+.+
T Consensus 202 n~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~ 267 (743)
T TIGR00870 202 LTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKE 267 (743)
T ss_pred hhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhc
Confidence 999999999999999986 234666776665543 77899999999999865
No 62
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.67 E-value=2.3e-16 Score=119.51 Aligned_cols=105 Identities=31% Similarity=0.493 Sum_probs=97.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 043342 244 DAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAI 323 (363)
Q Consensus 244 t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~i 323 (363)
..+.+++++|.++.|+..+..|.++|..- .|++|||+|+..|.+.++++|+..|++++.+|+.|-|||-.|+..||.+|
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c 82 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC 82 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence 45778999999999999999998887654 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHh
Q 043342 324 AQFLVKQNADIGMKDNDGNSPCHVCE 349 (363)
Q Consensus 324 v~~Ll~~Gad~~~~d~~G~TpL~~A~ 349 (363)
|++|++.||+..++..+|.+.+..+.
T Consensus 83 VklLL~~GAdrt~~~PdG~~~~eate 108 (117)
T KOG4214|consen 83 VKLLLQNGADRTIHAPDGTALIEATE 108 (117)
T ss_pred HHHHHHcCcccceeCCCchhHHhhcc
Confidence 99999999999999999999887654
No 63
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.67 E-value=1.5e-15 Score=122.81 Aligned_cols=113 Identities=38% Similarity=0.682 Sum_probs=107.8
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVC 318 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~ 318 (363)
+..|.||||+|+..++.+++++|++.+.+.+..+..|.||||+|+..+..+++++|+..|++++..+..|.||+|+|+..
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 46689999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 319 DREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 319 g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
++.+++++|+++|.+++..+..|.||+++|...
T Consensus 84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 116 (126)
T cd00204 84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKN 116 (126)
T ss_pred CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 999999999999999999999999999999765
No 64
>PHA02730 ankyrin-like protein; Provisional
Probab=99.65 E-value=6e-16 Score=158.17 Aligned_cols=177 Identities=14% Similarity=0.140 Sum_probs=137.0
Q ss_pred hHH-HHHhcCCCCHHHHHhc----CccccccccccccccccccCCCCcchhhhhcCCC-----CCcccccccc-cccccC
Q 043342 170 KWQ-AWQKLGAMPPEEAMQK----YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKA-----PMGPVFSSFA-YEEESG 238 (363)
Q Consensus 170 k~~-aw~~~g~t~l~~A~~~----yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~-----~~~~ll~~~~-~~~~~~ 238 (363)
..+ ..+..|.|++|.|... +.++++.|+..+++.. .++..|.||++.++..+ .+..+++... ...+..
T Consensus 32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin-~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~ 110 (672)
T PHA02730 32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERL-CRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELT 110 (672)
T ss_pred chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCc-ccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccc
Confidence 445 5567799999998665 3899999999887665 47788999999766544 2333443332 222445
Q ss_pred CCCchHHHHHHHH--cCCHHHHHHHHH-cCCCCccCC-----CCCChHHHHHHHcCCHHHHHHHHhCCCCCC-------C
Q 043342 239 NDLKMDAIHAFAR--EGDMDNLLKCIE-NGVSVNLRD-----SEGRAPLHWAVDRGHLNISELLVSKNADVN-------A 303 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~--~g~~~~v~~LL~-~g~~vn~~d-----~~g~TpLh~A~~~g~~~iv~~Ll~~gadin-------~ 303 (363)
+..+.+|||.++. .++.+++++|+. .+++++... ..|.+|++++...++.++|++|+++|++++ .
T Consensus 111 ~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~ 190 (672)
T PHA02730 111 SNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCM 190 (672)
T ss_pred cccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccccc
Confidence 5557889999988 889999999997 667877653 278999999999999999999999999995 2
Q ss_pred CCCCCC-cHHHHHH------HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 304 KDNEGQ-TPLHYAV------VCDREAIAQFLVKQNADIGMKDNDGNSPCHV 347 (363)
Q Consensus 304 ~d~~G~-TpLh~A~------~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~ 347 (363)
.+..+. |.||++. ..++.+++++|+++||++|.+|.+|.||||+
T Consensus 191 ~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~ 241 (672)
T PHA02730 191 YDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQY 241 (672)
T ss_pred ccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 344444 5566554 3467899999999999999999999999995
No 65
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.63 E-value=8.9e-16 Score=162.76 Aligned_cols=165 Identities=20% Similarity=0.199 Sum_probs=119.7
Q ss_pred HHHhcCcccccccccccc-ccccccCCCCcchhh-hhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHHHH---
Q 043342 184 EAMQKYIDIVTELYPTWA-AGSSLKSKRGQEDAA-STDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMDNL--- 258 (363)
Q Consensus 184 ~A~~~yv~~v~~Ll~~~~-~~~~~~~~~g~~~~~-~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v--- 258 (363)
.+..+.++.++.++.... ...+..+..|.++++ .+...+.. .+...+..... .+..|.|+||.|+.. ..+.+
T Consensus 24 A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~-eiv~lLl~~g~-~~~~G~T~Lh~A~~~-~~~~v~~l 100 (743)
T TIGR00870 24 AAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENL-ELTELLLNLSC-RGAVGDTLLHAISLE-YVDAVEAI 100 (743)
T ss_pred HHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChH-HHHHHHHhCCC-CCCcChHHHHHHHhc-cHHHHHHH
Confidence 456678888888887521 112234567889999 55555432 22222211111 567899999999873 33333
Q ss_pred -HHHHHcCCC------Ccc----CCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC--------------CCCCcHHH
Q 043342 259 -LKCIENGVS------VNL----RDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKD--------------NEGQTPLH 313 (363)
Q Consensus 259 -~~LL~~g~~------vn~----~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d--------------~~G~TpLh 313 (363)
..++..+.+ ++. ....|.||||+|+.+|+.+++++|+++|+++|.++ ..|+||||
T Consensus 101 l~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~ 180 (743)
T TIGR00870 101 LLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLN 180 (743)
T ss_pred HHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHH
Confidence 333333321 111 23469999999999999999999999999999764 35899999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 314 YAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 314 ~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+..|+.+++++|+++|+|++.+|..|+||||+|+.+
T Consensus 181 ~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~ 218 (743)
T TIGR00870 181 AAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVME 218 (743)
T ss_pred HHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhh
Confidence 99999999999999999999999999999999999876
No 66
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.62 E-value=3.7e-15 Score=140.27 Aligned_cols=144 Identities=20% Similarity=0.196 Sum_probs=113.0
Q ss_pred HHHHhcCCCCHHH-HHh-cCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHH
Q 043342 172 QAWQKLGAMPPEE-AMQ-KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAF 249 (363)
Q Consensus 172 ~aw~~~g~t~l~~-A~~-~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A 249 (363)
.+.++.+.+++.. |.. ++.++++.|+..+++..... ...+..|.||||+|
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~----------------------------~~sd~~g~TpLh~A 77 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPF----------------------------PLSENSKTNPLIYA 77 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccC----------------------------cccCCCCCCHHHHH
Confidence 3445556666554 444 57899999988665332100 01245689999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccCC-CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 043342 250 AREGDMDNLLKCIENGVSVNLRD-SEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLV 328 (363)
Q Consensus 250 a~~g~~~~v~~LL~~g~~vn~~d-~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll 328 (363)
+..|+.+++++|+++|+++|.++ ..|.||||+|+..++.+++++|+..|++++.+|..|.||||+|+..++..++.++.
T Consensus 78 a~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 78 IDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred HHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc
Confidence 99999999999999999999864 57999999999999999999999999999999999999999999988888876665
Q ss_pred hCCCCCCCCCCCCCcHHHHH
Q 043342 329 KQNADIGMKDNDGNSPCHVC 348 (363)
Q Consensus 329 ~~Gad~~~~d~~G~TpL~~A 348 (363)
|.. .+..+.+|++++
T Consensus 158 --~~~---~~~~~~~~~~~~ 172 (300)
T PHA02884 158 --DNE---ISNFYKHPKKIL 172 (300)
T ss_pred --CCc---ccccccChhhhh
Confidence 322 355667777754
No 67
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.61 E-value=5.3e-16 Score=150.51 Aligned_cols=184 Identities=22% Similarity=0.293 Sum_probs=141.7
Q ss_pred hhhhHHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCccc--ccccccccccCCCCch
Q 043342 167 ARAKWQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPV--FSSFAYEEESGNDLKM 243 (363)
Q Consensus 167 ~~ak~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~l--l~~~~~~~~~~~~~g~ 243 (363)
+.+..+..+..|.|++|.+ ...+.++|++|+..++..+. .+..+++|+|.++..+.+..+ +..++......|..|.
T Consensus 62 ~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~-~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~ 140 (527)
T KOG0505|consen 62 RGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNA-QDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGN 140 (527)
T ss_pred cCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccc-cccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCC
Confidence 3456688889999999986 55788999999987775544 778899999999988865432 2222222222222222
Q ss_pred HH------------HHHHHH-cC-C------------HHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhC
Q 043342 244 DA------------IHAFAR-EG-D------------MDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSK 297 (363)
Q Consensus 244 t~------------Lh~Aa~-~g-~------------~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 297 (363)
.| +-.++. .| + +.-++..+..|...+..+..|.|.||.|+.+|..++.++|++.
T Consensus 141 ~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~a 220 (527)
T KOG0505|consen 141 MPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQA 220 (527)
T ss_pred CccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHh
Confidence 22 222211 11 1 2234445557878888888899999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 298 NADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 298 gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|.+++.+|.+||||||.|+..|+.+++++|+++|++++.++..|.||+++|...
T Consensus 221 g~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 221 GYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred ccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence 999999999999999999999999999999999999999999999999999875
No 68
>PHA02792 ankyrin-like protein; Provisional
Probab=99.59 E-value=2.8e-15 Score=151.97 Aligned_cols=157 Identities=14% Similarity=0.141 Sum_probs=123.4
Q ss_pred ccccccccccccccCCCCcchhhhhcCCCC--Cc-ccccccccccccCCCCchHHHHHHHH-cCCHHHHHHHHHcCCCCc
Q 043342 194 TELYPTWAAGSSLKSKRGQEDAASTDSKAP--MG-PVFSSFAYEEESGNDLKMDAIHAFAR-EGDMDNLLKCIENGVSVN 269 (363)
Q Consensus 194 ~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~--~~-~ll~~~~~~~~~~~~~g~t~Lh~Aa~-~g~~~~v~~LL~~g~~vn 269 (363)
+.|+..++.+.. ..++.|+++.-..... +. .++..+....+..+-.|.+++|+-+. .|+++++++|+.+|+++|
T Consensus 22 ~~l~~~g~~~~~--~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN 99 (631)
T PHA02792 22 QSLIESGANPLY--EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEIN 99 (631)
T ss_pred HHHHHcCCCccc--ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcc
Confidence 445566665554 2445577775433322 11 23334444555677778889987765 789999999999999999
Q ss_pred cCCCCCChHHHHHHH-cCCHHHHHHHHhCCCCCC------------------------------------CCCCCCCcHH
Q 043342 270 LRDSEGRAPLHWAVD-RGHLNISELLVSKNADVN------------------------------------AKDNEGQTPL 312 (363)
Q Consensus 270 ~~d~~g~TpLh~A~~-~g~~~iv~~Ll~~gadin------------------------------------~~d~~G~TpL 312 (363)
.++..+.||+|+|+. .++.+++++|+++|++++ ..|..|.|||
T Consensus 100 ~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L 179 (631)
T PHA02792 100 SIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVL 179 (631)
T ss_pred cccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchH
Confidence 999999999999965 699999999999998632 4466799999
Q ss_pred HHHHHcC-------CHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcCc
Q 043342 313 HYAVVCD-------REAIAQFLVKQNADIGMKDNDGNSPCHVCESDW 352 (363)
Q Consensus 313 h~A~~~g-------~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~~ 352 (363)
|+|+..+ +.+++++|+.+|++++.+|..|.||||+|+.+-
T Consensus 180 ~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~ 226 (631)
T PHA02792 180 YYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKC 226 (631)
T ss_pred HHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcc
Confidence 9999999 899999999999999999999999999998664
No 69
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.59 E-value=2.4e-15 Score=145.94 Aligned_cols=114 Identities=32% Similarity=0.473 Sum_probs=101.2
Q ss_pred ccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCC------------
Q 043342 236 ESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNA------------ 303 (363)
Q Consensus 236 ~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~------------ 303 (363)
+..+.+|.|+||.+|...+.++|++|+++|++||..|..|+||||.|+..||+.++++|++.|+++..
T Consensus 67 ~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~ 146 (527)
T KOG0505|consen 67 NLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLA 146 (527)
T ss_pred cccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccc
Confidence 55677889999999999999999999999999999999999999999999999999999988774222
Q ss_pred -----------------------------------------------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 043342 304 -----------------------------------------------KDNEGQTPLHYAVVCDREAIAQFLVKQNADIGM 336 (363)
Q Consensus 304 -----------------------------------------------~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~ 336 (363)
.+..|.|.||.|+..|..++.++|+++|.++++
T Consensus 147 e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~ 226 (527)
T KOG0505|consen 147 EDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNI 226 (527)
T ss_pred cCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccc
Confidence 234578999999999999999999999999999
Q ss_pred CCCCCCcHHHHHh
Q 043342 337 KDNDGNSPCHVCE 349 (363)
Q Consensus 337 ~d~~G~TpL~~A~ 349 (363)
+|.+|+||||.|+
T Consensus 227 ~D~dgWtPlHAAA 239 (527)
T KOG0505|consen 227 KDYDGWTPLHAAA 239 (527)
T ss_pred ccccCCCcccHHH
Confidence 9999999999876
No 70
>PHA02792 ankyrin-like protein; Provisional
Probab=99.59 E-value=7e-15 Score=149.06 Aligned_cols=109 Identities=19% Similarity=0.253 Sum_probs=100.1
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCC--ChHHHHHHHcCCH---HHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 043342 242 KMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEG--RAPLHWAVDRGHL---NISELLVSKNADVNAKDNEGQTPLHYAV 316 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g--~TpLh~A~~~g~~---~iv~~Ll~~gadin~~d~~G~TpLh~A~ 316 (363)
....+|.|+..|+.+++++|+++|++++.+|..| .||||+|+..... .++++|+.+|+++|.+|..|+||||+|+
T Consensus 339 ~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa 418 (631)
T PHA02792 339 HINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCI 418 (631)
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHH
Confidence 5678999999999999999999999999998774 6999998776654 4688999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 317 VCDREAIAQFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 317 ~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
..++.+++++|+++|++++.+|..|.||||+|..
T Consensus 419 ~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 419 ESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999864
No 71
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.58 E-value=7.3e-16 Score=139.21 Aligned_cols=105 Identities=33% Similarity=0.582 Sum_probs=95.4
Q ss_pred HHHHHHcCCHHHHHHHHHc-CCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 043342 246 IHAFAREGDMDNLLKCIEN-GVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIA 324 (363)
Q Consensus 246 Lh~Aa~~g~~~~v~~LL~~-g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv 324 (363)
++-.|+.|+.-.|+..|+. .-+.|.-|..|.+||||||..|+..+++.|+.+|+.+|..+....||||+|+.+||.+||
T Consensus 4 if~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdiv 83 (448)
T KOG0195|consen 4 IFGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIV 83 (448)
T ss_pred hhhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHH
Confidence 4556788886666665554 467899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 325 QFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 325 ~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
+.|+++.+|+|..|..|+|||||||-
T Consensus 84 qkll~~kadvnavnehgntplhyacf 109 (448)
T KOG0195|consen 84 QKLLSRKADVNAVNEHGNTPLHYACF 109 (448)
T ss_pred HHHHHHhcccchhhccCCCchhhhhh
Confidence 99999999999999999999999984
No 72
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.56 E-value=6e-15 Score=147.92 Aligned_cols=119 Identities=23% Similarity=0.303 Sum_probs=112.5
Q ss_pred ccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q 043342 232 AYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTP 311 (363)
Q Consensus 232 ~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~Tp 311 (363)
....+..+..|.|.||.||.+|+..++++|+++.+-++..|..|.+|||+|++.|+.+++++|+..+..+|..+..|.||
T Consensus 39 sds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tp 118 (854)
T KOG0507|consen 39 SDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETP 118 (854)
T ss_pred CccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCc
Confidence 33446677799999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 312 LHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 312 Lh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
||.|++.|+.+++.+|+++|+++-++|..+.|+|++|++
T Consensus 119 lhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~q 157 (854)
T KOG0507|consen 119 LHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASR 157 (854)
T ss_pred cchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHH
Confidence 999999999999999999999999999999999999985
No 73
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.54 E-value=5.1e-14 Score=125.36 Aligned_cols=114 Identities=26% Similarity=0.438 Sum_probs=107.1
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCC-----HHHHHHHHhCCC---CCCCCCCCCC
Q 043342 238 GNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGH-----LNISELLVSKNA---DVNAKDNEGQ 309 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~-----~~iv~~Ll~~ga---din~~d~~G~ 309 (363)
.+..+.+++|.++..++..++++++..|++++.++..|.||||+|+..++ .++++.|+..|+ ..+.+|..|+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~ 148 (235)
T COG0666 69 RDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGN 148 (235)
T ss_pred CCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCC
Confidence 44556899999999999999999999999999999999999999999999 999999999999 5666799999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 310 TPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 310 TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
||||+|+..|+.+++++|++.|++++.++..|.|+++.|+..
T Consensus 149 tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~ 190 (235)
T COG0666 149 TPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKN 190 (235)
T ss_pred chhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhccc
Confidence 999999999999999999999999999999999999999876
No 74
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.54 E-value=3.9e-14 Score=147.86 Aligned_cols=106 Identities=27% Similarity=0.399 Sum_probs=100.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 043342 244 DAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAI 323 (363)
Q Consensus 244 t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~i 323 (363)
..|+.|+..|+.+.++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|+++|.+|..|.||||+|+..|+.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhC-------CCCCCCCCCCCCcHHHHHh
Q 043342 324 AQFLVKQ-------NADIGMKDNDGNSPCHVCE 349 (363)
Q Consensus 324 v~~Ll~~-------Gad~~~~d~~G~TpL~~A~ 349 (363)
+++|+++ |++++..+..|.+|+....
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999998 9999999998887766543
No 75
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.54 E-value=2.2e-15 Score=131.34 Aligned_cols=177 Identities=21% Similarity=0.226 Sum_probs=132.8
Q ss_pred hhhhhHHHHHhcCCCCHHHHH-hcCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCCCc
Q 043342 166 TARAKWQAWQKLGAMPPEEAM-QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLK 242 (363)
Q Consensus 166 ~~~ak~~aw~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g 242 (363)
..+++-|.-.-.+.+++.-+. +.|.+.+..+.. ...+..++.|.|++.-++.+|.+.. ++...+.+........
T Consensus 117 tN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~---n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~r 193 (296)
T KOG0502|consen 117 TNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVN---NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYR 193 (296)
T ss_pred cccccCCccccccCChhhHHHHHHHHHHHHHHhh---ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhh
Confidence 334444444444455555432 234444433333 2233345666666666666664432 2333334444445556
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q 043342 243 MDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREA 322 (363)
Q Consensus 243 ~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~ 322 (363)
.++|..|++.|-.++|++||.++.++|..|.+|-|||.+|++.+|.+|++.|+..|++++..+..|++++..|+..|+.
T Consensus 194 esALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr- 272 (296)
T KOG0502|consen 194 ESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR- 272 (296)
T ss_pred hhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhCCCCCCCCCCCCCcHHH
Q 043342 323 IAQFLVKQNADIGMKDNDGNSPCH 346 (363)
Q Consensus 323 iv~~Ll~~Gad~~~~d~~G~TpL~ 346 (363)
+|+..|++-+..+.+|..-.||+|
T Consensus 273 ~Vqqvie~h~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 273 IVQQVIEKHALKLCQDSEKRTPLH 296 (296)
T ss_pred HHHHHHHHHHHHHhhcccCCCCCC
Confidence 899999988888999988888876
No 76
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.51 E-value=1.4e-14 Score=102.39 Aligned_cols=55 Identities=40% Similarity=0.688 Sum_probs=27.0
Q ss_pred HHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 043342 294 LVSKN-ADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVC 348 (363)
Q Consensus 294 Ll~~g-adin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A 348 (363)
||++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 45666 77777777777888887777777777777777777777777778887775
No 77
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=4.9e-14 Score=136.15 Aligned_cols=107 Identities=30% Similarity=0.453 Sum_probs=98.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 043342 244 DAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAI 323 (363)
Q Consensus 244 t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~i 323 (363)
..|..|+..|.+++|+..+..--|+...+..|.|+||-|+..||.+||+|||..|+++|+.|.+||||||+|+.|++..+
T Consensus 552 aLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence 34677889999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCC-CCCCcHHHHHhc
Q 043342 324 AQFLVKQNADIGMKD-NDGNSPCHVCES 350 (363)
Q Consensus 324 v~~Ll~~Gad~~~~d-~~G~TpL~~A~~ 350 (363)
|+.|+++|+.+-+.. .++.|+.+-|..
T Consensus 632 ckqLVe~GaavfAsTlSDmeTa~eKCee 659 (752)
T KOG0515|consen 632 CKQLVESGAAVFASTLSDMETAAEKCEE 659 (752)
T ss_pred HHHHHhccceEEeeecccccchhhhcch
Confidence 999999999887665 488999888754
No 78
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.49 E-value=4.4e-14 Score=143.21 Aligned_cols=114 Identities=25% Similarity=0.327 Sum_probs=104.8
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccC---------C--------------CCCChHHHHHHHcCCHHHHHHH
Q 043342 238 GNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLR---------D--------------SEGRAPLHWAVDRGHLNISELL 294 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~---------d--------------~~g~TpLh~A~~~g~~~iv~~L 294 (363)
....|.|+||.|+.+.+.+.|+.|++.|+||+.+ | ..|..||.+|+..++.+++++|
T Consensus 180 eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlL 259 (782)
T KOG3676|consen 180 EEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLL 259 (782)
T ss_pred HhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHH
Confidence 3467899999999999999999999999999752 1 1267899999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHhcC
Q 043342 295 VSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNAD--IGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 295 l~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad--~~~~d~~G~TpL~~A~~~ 351 (363)
+++|+|+|++|..|+|.||..+.+-..++..+++++|++ ..++|+.|.|||-+|+.-
T Consensus 260 l~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAakl 318 (782)
T KOG3676|consen 260 LAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKL 318 (782)
T ss_pred HhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHh
Confidence 999999999999999999999999889999999999999 999999999999999865
No 79
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.49 E-value=2.1e-13 Score=105.30 Aligned_cols=69 Identities=38% Similarity=0.628 Sum_probs=65.7
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 279 LHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 279 Lh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
||+||..|+.+++++|++.+.+++. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 69 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAEN 69 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHc
Confidence 7999999999999999999998877 89999999999999999999999999999999999999999987
No 80
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.46 E-value=8.2e-14 Score=139.86 Aligned_cols=181 Identities=18% Similarity=0.222 Sum_probs=147.2
Q ss_pred hhHHHHHhcCCCCHHH-HHhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCCCchHH
Q 043342 169 AKWQAWQKLGAMPPEE-AMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDA 245 (363)
Q Consensus 169 ak~~aw~~~g~t~l~~-A~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~ 245 (363)
+-++--+..|.+|++. |..+..++++.++.+. +.....+..+.+++|.++..+.... ++.....+.-.++..+.|+
T Consensus 73 a~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~-d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ 151 (854)
T KOG0507|consen 73 ALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQT-DILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETV 151 (854)
T ss_pred hhhhhhhccCcceEEehhhcCcchHHHHHHhcc-cCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccH
Confidence 3334444556677775 6778889998888876 4555567788899999998886554 4455566667788889999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCC--------ccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 043342 246 IHAFAREGDMDNLLKCIENGVSV--------NLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVV 317 (363)
Q Consensus 246 Lh~Aa~~g~~~~v~~LL~~g~~v--------n~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~ 317 (363)
|-.|++.|..++++.|+.....+ ..++-.+.+|||.|+.+||.++++.|++.|.++|.....| |+||-|+.
T Consensus 152 ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaal 230 (854)
T KOG0507|consen 152 LDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAAL 230 (854)
T ss_pred HHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhh
Confidence 99999999999999998864322 1234457899999999999999999999999999988777 99999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 318 CDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 318 ~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
||..++|.+|++.|++..++|.+|+|.|++...-
T Consensus 231 cgk~evvr~ll~~gin~h~~n~~~qtaldil~d~ 264 (854)
T KOG0507|consen 231 CGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDL 264 (854)
T ss_pred cCcchhhhHHHhhccccccccccchHHHHHHHhc
Confidence 9999999999999999999999999999987644
No 81
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.45 E-value=7.4e-14 Score=98.65 Aligned_cols=55 Identities=53% Similarity=0.910 Sum_probs=33.4
Q ss_pred HHHcC-CCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 043342 261 CIENG-VSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYA 315 (363)
Q Consensus 261 LL~~g-~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A 315 (363)
||++| .++|.+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56777 88999999999999999999999999999999999999999999999997
No 82
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.45 E-value=2.2e-13 Score=95.48 Aligned_cols=54 Identities=50% Similarity=0.929 Sum_probs=42.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 043342 275 GRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLV 328 (363)
Q Consensus 275 g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll 328 (363)
|+||||+||..|+.+++++|++.|+++|.+|.+|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 678889999888888999888888888888888999999999888888888886
No 83
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.39 E-value=1.8e-12 Score=117.40 Aligned_cols=107 Identities=24% Similarity=0.371 Sum_probs=97.4
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCH
Q 043342 243 MDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAK-DNEGQTPLHYAVVCDRE 321 (363)
Q Consensus 243 ~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~-d~~G~TpLh~A~~~g~~ 321 (363)
..+|..++..|+.+....||..--++|.+|..|+|+|..|+.+|+.++++.||+.|+|+|.. +..+.||||+|+.+|+.
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~ 92 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQ 92 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCc
Confidence 57899999999999999999876668999999999999999999999999999999999864 56789999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcHHHHHh
Q 043342 322 AIAQFLVKQNADIGMKDNDGNSPCHVCE 349 (363)
Q Consensus 322 ~iv~~Ll~~Gad~~~~d~~G~TpL~~A~ 349 (363)
+++++|++.|+.+...|.-|+|+-.+|+
T Consensus 93 dvcrllldaGa~~~~vNsvgrTAaqmAA 120 (396)
T KOG1710|consen 93 DVCRLLLDAGARMYLVNSVGRTAAQMAA 120 (396)
T ss_pred hHHHHHHhccCccccccchhhhHHHHHH
Confidence 9999999999999999999999998875
No 84
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.35 E-value=7.6e-12 Score=100.92 Aligned_cols=93 Identities=33% Similarity=0.606 Sum_probs=87.0
Q ss_pred ccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 043342 236 ESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYA 315 (363)
Q Consensus 236 ~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A 315 (363)
...+..|.++||.|+..++.+++++|+..+++++..+..|.||+|+|+..++.+++++|+.++.+++..+..|.||||+|
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~ 113 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLA 113 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 34566788999999999999999999999998998999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHH
Q 043342 316 VVCDREAIAQFLV 328 (363)
Q Consensus 316 ~~~g~~~iv~~Ll 328 (363)
...++.+++++|+
T Consensus 114 ~~~~~~~~~~~Ll 126 (126)
T cd00204 114 AKNGHLEVVKLLL 126 (126)
T ss_pred HhcCCHHHHHHhC
Confidence 9999999999874
No 85
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.33 E-value=2.4e-12 Score=90.08 Aligned_cols=54 Identities=31% Similarity=0.658 Sum_probs=46.4
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHH
Q 043342 242 KMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLV 295 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll 295 (363)
|+|+||+||+.|+.+++++|+++|.++|.+|..|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 579999999999999999999999999999999999999999999999999986
No 86
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.31 E-value=8.2e-12 Score=111.06 Aligned_cols=101 Identities=29% Similarity=0.441 Sum_probs=93.3
Q ss_pred cccccccCCCCchHHHHHHHHcCC-----HHHHHHHHHcCC---CCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCC
Q 043342 231 FAYEEESGNDLKMDAIHAFAREGD-----MDNLLKCIENGV---SVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVN 302 (363)
Q Consensus 231 ~~~~~~~~~~~g~t~Lh~Aa~~g~-----~~~v~~LL~~g~---~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin 302 (363)
...+....+..|.|+||+|+..++ .++++.|++.|+ ..+.++..|.||||+|+..|+.++++.|+..|++++
T Consensus 95 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~ 174 (235)
T COG0666 95 SGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPN 174 (235)
T ss_pred cCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCc
Confidence 334447788899999999999999 999999999999 566679999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 043342 303 AKDNEGQTPLHYAVVCDREAIAQFLVKQN 331 (363)
Q Consensus 303 ~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G 331 (363)
.++..|.|++|+|+..++..+++.|+..+
T Consensus 175 ~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 175 SRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred ccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999999999999965
No 87
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.27 E-value=1.3e-11 Score=125.53 Aligned_cols=116 Identities=23% Similarity=0.318 Sum_probs=96.7
Q ss_pred ccCCCCchHHHHHHHHc---CCHHHHHHHHHcCCC-Ccc---CC-CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCC---
Q 043342 236 ESGNDLKMDAIHAFARE---GDMDNLLKCIENGVS-VNL---RD-SEGRAPLHWAVDRGHLNISELLVSKNADVNAK--- 304 (363)
Q Consensus 236 ~~~~~~g~t~Lh~Aa~~---g~~~~v~~LL~~g~~-vn~---~d-~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~--- 304 (363)
+.+...|.|.||.|..+ ++.++++.|++.-.. +|. -+ ..|.||||+|+.+.+.++|+.|+..|||||++
T Consensus 137 ~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G 216 (782)
T KOG3676|consen 137 NERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACG 216 (782)
T ss_pred ccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhc
Confidence 44567799999999974 445888888875322 222 22 35999999999999999999999999999885
Q ss_pred ------C--------------CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 305 ------D--------------NEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 305 ------d--------------~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
| ..|..||.+|+..++.+|+++|+++|||++.+|..|+|.||+++-.
T Consensus 217 ~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~ 283 (782)
T KOG3676|consen 217 AFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIH 283 (782)
T ss_pred cccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHH
Confidence 1 1367899999999999999999999999999999999999998755
No 88
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.21 E-value=2.4e-11 Score=92.43 Aligned_cols=74 Identities=26% Similarity=0.284 Sum_probs=69.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 241 LKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHY 314 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~ 314 (363)
.|++|||+|+-.|.++++.+|+..|++++.+|+.|-|||.-|+..||.++|++|+++|++-..+..+|.+.+..
T Consensus 33 ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~ea 106 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEA 106 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhh
Confidence 57899999999999999999999999999999999999999999999999999999999988888888776654
No 89
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.17 E-value=8e-11 Score=106.75 Aligned_cols=96 Identities=18% Similarity=0.232 Sum_probs=88.8
Q ss_pred cccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCcc-CCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q 043342 233 YEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNL-RDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTP 311 (363)
Q Consensus 233 ~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~-~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~Tp 311 (363)
...+..|..|+++|..|+..|+++.+++||+.|+|+|. .+..++||||+|+..|+.+++++|++.|+.....+.-|+|+
T Consensus 36 r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTA 115 (396)
T KOG1710|consen 36 RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTA 115 (396)
T ss_pred hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhH
Confidence 34577899999999999999999999999999999987 45679999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHH
Q 043342 312 LHYAVVCDREAIAQFLV 328 (363)
Q Consensus 312 Lh~A~~~g~~~iv~~Ll 328 (363)
-..|+..|+.++|.++-
T Consensus 116 aqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 116 AQMAAFVGHHECVAIIN 132 (396)
T ss_pred HHHHHHhcchHHHHHHh
Confidence 99999999999988764
No 90
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.14 E-value=1.1e-11 Score=128.32 Aligned_cols=189 Identities=19% Similarity=0.204 Sum_probs=157.5
Q ss_pred hhhhhhhhHHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCC
Q 043342 163 LKMTARAKWQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGN 239 (363)
Q Consensus 163 ~~~~~~ak~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~ 239 (363)
+.+...+.++..++.|.+|+-.| -.+++.+|..|+....+...-+++++.+++.+++..+.-. .++...+...+.++
T Consensus 775 llv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrn 854 (2131)
T KOG4369|consen 775 LLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRN 854 (2131)
T ss_pred HHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccc
Confidence 33444578888889999998765 4577888888888777666667788888888887777433 34444555666778
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCC--CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHH
Q 043342 240 DLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDS--EGRAPLHWAVDRGHLNISELLVSKNADVNAKD-NEGQTPLHYAV 316 (363)
Q Consensus 240 ~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~--~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d-~~G~TpLh~A~ 316 (363)
-...|||..|...|..++|+.||..|..||.+.. .|-.||++|...||...++.|++.|.+||..- .+-+|+|-+|+
T Consensus 855 vsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~ 934 (2131)
T KOG4369|consen 855 VSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLAL 934 (2131)
T ss_pred hhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeecc
Confidence 8889999999999999999999999999988754 58999999999999999999999999999754 46789999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 317 VCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 317 ~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
..|+.+++.+||.+.+++..+-+.|.|||.-+++.
T Consensus 935 fqgr~evv~lLLa~~anvehRaktgltplme~Asg 969 (2131)
T KOG4369|consen 935 FQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASG 969 (2131)
T ss_pred ccCcchHHHHHHHHhhhhhhhcccCCcccchhhcC
Confidence 99999999999999999999999999999876654
No 91
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.13 E-value=1.4e-10 Score=121.26 Aligned_cols=75 Identities=28% Similarity=0.449 Sum_probs=72.3
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 277 APLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 277 TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+.||.|+..|+.+++++|+..|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 158 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEEN 158 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 358899999999999999999999999999999999999999999999999999999999999999999999876
No 92
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=8.5e-11 Score=114.00 Aligned_cols=97 Identities=26% Similarity=0.301 Sum_probs=84.4
Q ss_pred cccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcH
Q 043342 233 YEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKD-NEGQTP 311 (363)
Q Consensus 233 ~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d-~~G~Tp 311 (363)
.+....|+.|.|+||-|+..||.++|++||+.|+++|..|.+|+||||+|+..++..+|+.|++.|+-|-+.. .++.|+
T Consensus 574 ~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa 653 (752)
T KOG0515|consen 574 TDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETA 653 (752)
T ss_pred cCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccch
Confidence 3445678889999999999999999999999999999999999999999999999999999999999876544 467888
Q ss_pred HHHHH--HcCCHHHHHHHHh
Q 043342 312 LHYAV--VCDREAIAQFLVK 329 (363)
Q Consensus 312 Lh~A~--~~g~~~iv~~Ll~ 329 (363)
...+- ..|..+|.+||..
T Consensus 654 ~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 654 AEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred hhhcchhhhhHHHHHHHHHH
Confidence 77654 3477889998863
No 93
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.01 E-value=1.8e-10 Score=116.76 Aligned_cols=95 Identities=27% Similarity=0.380 Sum_probs=83.9
Q ss_pred HHHHHHHc-CCC-CccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 043342 257 NLLKCIEN-GVS-VNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDN-EGQTPLHYAVVCDREAIAQFLVKQNAD 333 (363)
Q Consensus 257 ~v~~LL~~-g~~-vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~Gad 333 (363)
.++-++.+ +.+ .|++|..|+|+||+++..+...++++||++|++++.+|. .|+||||-|+..|+++++-+||++|+.
T Consensus 32 qlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S 111 (1267)
T KOG0783|consen 32 QLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS 111 (1267)
T ss_pred HHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc
Confidence 34444443 323 688999999999999999999999999999999999997 599999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHhcC
Q 043342 334 IGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 334 ~~~~d~~G~TpL~~A~~~ 351 (363)
+.++|++|..||+..++.
T Consensus 112 L~i~Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 112 LRIKDKEGLSPLQFLSRV 129 (1267)
T ss_pred eEEecccCCCHHHHHhhc
Confidence 999999999999988763
No 94
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.91 E-value=5e-09 Score=101.15 Aligned_cols=86 Identities=33% Similarity=0.531 Sum_probs=80.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCccCCCC-CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q 043342 244 DAIHAFAREGDMDNLLKCIENGVSVNLRDSE-GRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREA 322 (363)
Q Consensus 244 t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~-g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~ 322 (363)
--||..++.|+++....||..|+++|..+.+ |.||||.|+..|+..-+++|+-+|+|+++.|.+|+||+.||-..||.+
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE 214 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence 4699999999999999999999999998764 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 043342 323 IAQFLVK 329 (363)
Q Consensus 323 iv~~Ll~ 329 (363)
+.+.|++
T Consensus 215 laeRl~e 221 (669)
T KOG0818|consen 215 LAERLVE 221 (669)
T ss_pred HHHHHHH
Confidence 8887765
No 95
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.89 E-value=4.7e-10 Score=116.61 Aligned_cols=185 Identities=20% Similarity=0.158 Sum_probs=107.2
Q ss_pred hhhhHHHHHhcCCCCHHHH-HhcCcccccccccccccccc-ccCCCCcchhhhhcCCCCCcccccc---cccccccCCCC
Q 043342 167 ARAKWQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSS-LKSKRGQEDAASTDSKAPMGPVFSS---FAYEEESGNDL 241 (363)
Q Consensus 167 ~~ak~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~-~~~~~g~~~~~~a~~~~~~~~ll~~---~~~~~~~~~~~ 241 (363)
..+.-.+.+-..-||+..| ..+|+++|..|+..+...+. .-.+-|..|++.+...+.-...+.. ...........
T Consensus 846 ~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTN 925 (2131)
T KOG4369|consen 846 AGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETN 925 (2131)
T ss_pred hhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccc
Confidence 3344445555667787765 44788888888886644332 2334556677766665533322222 11111112233
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCC-------------------
Q 043342 242 KMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVN------------------- 302 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin------------------- 302 (363)
.+|+|-.|+..|..+++.+||.+.+++..+-..|.|||+-++..|.+++-++||..|+|+|
T Consensus 926 rnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kG 1005 (2131)
T KOG4369|consen 926 RNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKG 1005 (2131)
T ss_pred cccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCC
Confidence 3566666666666666666666666666666666666666666666666566665555544
Q ss_pred ----------------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 303 ----------------AKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 303 ----------------~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
++++.|.|+|.+|+.-|+...+.+|++++++++..|+.-.+++.-|.++
T Consensus 1006 h~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRK 1070 (2131)
T KOG4369|consen 1006 HTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRK 1070 (2131)
T ss_pred chhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHh
Confidence 4455666666666666666666666666666666666666666555554
No 96
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.86 E-value=2.5e-09 Score=102.87 Aligned_cols=93 Identities=24% Similarity=0.419 Sum_probs=86.6
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHH
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSK-NADVNAKDNEGQTPLHYAVV 317 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~-gadin~~d~~G~TpLh~A~~ 317 (363)
...+...+.+|++.|++..++.+.-.|.+++.+|.+.+|+||.|+..|+.+++++|++. +.+++.+|.+|+|||.-|..
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~ 582 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH 582 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence 34456789999999999999999999999999999999999999999999999999986 89999999999999999999
Q ss_pred cCCHHHHHHHHhCC
Q 043342 318 CDREAIAQFLVKQN 331 (363)
Q Consensus 318 ~g~~~iv~~Ll~~G 331 (363)
.+|.+++++|-++-
T Consensus 583 F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 583 FKHKEVVKLLEEAQ 596 (622)
T ss_pred cCcHHHHHHHHHHh
Confidence 99999999998753
No 97
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.74 E-value=1.5e-08 Score=63.18 Aligned_cols=32 Identities=44% Similarity=0.760 Sum_probs=23.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 043342 307 EGQTPLHYAVVCDREAIAQFLVKQNADIGMKD 338 (363)
Q Consensus 307 ~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d 338 (363)
+|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 36677777777777777777777777777665
No 98
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.73 E-value=3e-08 Score=97.51 Aligned_cols=91 Identities=24% Similarity=0.400 Sum_probs=80.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCC--Ccc--CCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 043342 244 DAIHAFAREGDMDNLLKCIENGVS--VNL--RDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCD 319 (363)
Q Consensus 244 t~Lh~Aa~~g~~~~v~~LL~~g~~--vn~--~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g 319 (363)
.-|..|+...++..+-.||.+|.. +|. .+.+|+|+||+||..|+..+.++|+-+|+|+..+|..|+|+|.||-+.|
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcc
Confidence 456677778888899999999854 443 3456899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCC
Q 043342 320 REAIAQFLVKQNADI 334 (363)
Q Consensus 320 ~~~iv~~Ll~~Gad~ 334 (363)
..+|+.+|+++|+..
T Consensus 706 sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 706 SQECIDVLLQYGCPD 720 (749)
T ss_pred cHHHHHHHHHcCCCc
Confidence 999999999998754
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=98.73 E-value=1.6e-08 Score=61.66 Aligned_cols=29 Identities=34% Similarity=0.639 Sum_probs=19.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 043342 307 EGQTPLHYAVVCDREAIAQFLVKQNADIG 335 (363)
Q Consensus 307 ~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~ 335 (363)
+|+||||+|+..|+.+++++|+++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 36667777777777777777777766665
No 100
>KOG3878 consensus Protein involved in maintenance of Golgi structure and ER-Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.72 E-value=1.5e-08 Score=93.28 Aligned_cols=93 Identities=25% Similarity=0.422 Sum_probs=84.8
Q ss_pred ccccccchHHHHHHHHHHHHHHhhhhcCC-CCChhhHhHHhhhhhccccCCCCC---CCCchhhhhhhhhHHHHHhcCCC
Q 043342 105 WEGVESTELDEMFSAATAFVAASAAASSQ-KVSNDVQLQLYALYKIATEGPCSA---PQPSALKMTARAKWQAWQKLGAM 180 (363)
Q Consensus 105 ~e~~e~~~l~~~f~~A~~~v~~~~~~~~~-~~~~~~~L~lyalykqAt~G~~~~---~~p~~~~~~~~ak~~aw~~~g~t 180 (363)
.++.++..|++.|..|+.|++. ++|+. +++++++|+|.+|.||+..|+.++ +.-++|++.|+..-.+|..+|.+
T Consensus 24 ~~~~wGf~LeElY~LA~~fyKe--~~GKa~h~~YEd~lKLial~kQv~~Gp~n~d~~p~~G~lDv~GnDr~~~W~~LG~~ 101 (469)
T KOG3878|consen 24 SAEKWGFPLEELYRLAFTFYKE--NSGKAIHLSYEDNLKLIALKKQVALGPFNTDRAPALGVLDVIGNDRQQHWQLLGEI 101 (469)
T ss_pred HHHHhCCCHHHHHHHHHHHHHh--ccCCccCCChhhhhhhhhhHhhhhcCCCCcccCcccceeecccChHHHHHHHHhcc
Confidence 4778899999999999999995 67887 999999999999999999999984 55699999999999999999999
Q ss_pred CHHHHHhcCcccccccccc
Q 043342 181 PPEEAMQKYIDIVTELYPT 199 (363)
Q Consensus 181 ~l~~A~~~yv~~v~~Ll~~ 199 (363)
+.++||..++.++....+.
T Consensus 102 sre~AM~~FV~Lldr~C~~ 120 (469)
T KOG3878|consen 102 SREQAMEGFVDLLDRMCSA 120 (469)
T ss_pred cHHHHHHHHHHHHHhcchh
Confidence 9999999999998877653
No 101
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.71 E-value=6e-09 Score=106.01 Aligned_cols=90 Identities=27% Similarity=0.386 Sum_probs=82.5
Q ss_pred cccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCC-CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC
Q 043342 229 SSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSE-GRAPLHWAVDRGHLNISELLVSKNADVNAKDNE 307 (363)
Q Consensus 229 ~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~-g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~ 307 (363)
+...+..+..|..|+|+||.++..+...++++||++|++++.+|.. |+||||-|+..|+++++-.||.+|+.+-.+|++
T Consensus 39 k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dke 118 (1267)
T KOG0783|consen 39 KSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKE 118 (1267)
T ss_pred HhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEeccc
Confidence 3344456778899999999999999999999999999999999985 999999999999999999999999999999999
Q ss_pred CCcHHHHHHHc
Q 043342 308 GQTPLHYAVVC 318 (363)
Q Consensus 308 G~TpLh~A~~~ 318 (363)
|..||.+-++.
T Consensus 119 glsplq~~~r~ 129 (1267)
T KOG0783|consen 119 GLSPLQFLSRV 129 (1267)
T ss_pred CCCHHHHHhhc
Confidence 99999988763
No 102
>PF13606 Ank_3: Ankyrin repeat
Probab=98.59 E-value=6.4e-08 Score=58.98 Aligned_cols=30 Identities=43% Similarity=0.756 Sum_probs=24.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 043342 274 EGRAPLHWAVDRGHLNISELLVSKNADVNA 303 (363)
Q Consensus 274 ~g~TpLh~A~~~g~~~iv~~Ll~~gadin~ 303 (363)
+|+||||+||..|+.+++++|+++|+++|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 478888888888888888888888888763
No 103
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.59 E-value=7.9e-08 Score=59.93 Aligned_cols=33 Identities=52% Similarity=0.961 Sum_probs=28.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q 043342 274 EGRAPLHWAVDRGHLNISELLVSKNADVNAKDN 306 (363)
Q Consensus 274 ~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~ 306 (363)
+|+||||+|+.+|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 478899999999999999999999998888763
No 104
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.58 E-value=1.3e-07 Score=92.77 Aligned_cols=104 Identities=24% Similarity=0.370 Sum_probs=89.2
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCHHH
Q 043342 246 IHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNAD--VNAKDNEGQTPLHYAVVCDREAI 323 (363)
Q Consensus 246 Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad--in~~d~~G~TpLh~A~~~g~~~i 323 (363)
|..|+..+++-.++.....|.++..++.+-++.||+|+..|+-++|+++|++|.. +++.|..|.|+||.|+..++..+
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence 5667777777777777777888888888889999999999999999999999875 57778899999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHh
Q 043342 324 AQFLVKQNADIGMKDNDGNSPCHVCE 349 (363)
Q Consensus 324 v~~Ll~~Gad~~~~d~~G~TpL~~A~ 349 (363)
+++|++.|+.+...|..|.||-.-|.
T Consensus 950 c~~lvdagasl~ktd~kg~tp~eraq 975 (1004)
T KOG0782|consen 950 CQLLVDAGASLRKTDSKGKTPQERAQ 975 (1004)
T ss_pred HHHHHhcchhheecccCCCChHHHHH
Confidence 99999999999999999999987664
No 105
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.56 E-value=1.4e-07 Score=92.22 Aligned_cols=87 Identities=36% Similarity=0.537 Sum_probs=75.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHc--CCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q 043342 244 DAIHAFAREGDMDNLLKCIEN--GVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDRE 321 (363)
Q Consensus 244 t~Lh~Aa~~g~~~~v~~LL~~--g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~ 321 (363)
-|+|+++...+.+.+...+.. ...++.+|..|+||||+|+..|+...++.|+..|+++..+++.|++|||-|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 468999988887776664433 456888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC
Q 043342 322 AIAQFLVKQ 330 (363)
Q Consensus 322 ~iv~~Ll~~ 330 (363)
+++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 888777653
No 106
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.50 E-value=2.8e-07 Score=89.37 Aligned_cols=82 Identities=30% Similarity=0.404 Sum_probs=72.7
Q ss_pred cCCCCCCh------HHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q 043342 270 LRDSEGRA------PLHWAVDRGHLNISELLVSKNADVNAKDN-EGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGN 342 (363)
Q Consensus 270 ~~d~~g~T------pLh~A~~~g~~~iv~~Ll~~gadin~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~ 342 (363)
.+|.+|.| -||-.++.|+.+.+-.||..|+++|..+. .|.||||.|++.|+..-+++|+-+|||++..|.+|.
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~Gm 201 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGM 201 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCC
Confidence 45555544 58989999999999999999999998775 699999999999999999999999999999999999
Q ss_pred cHHHHHhcC
Q 043342 343 SPCHVCESD 351 (363)
Q Consensus 343 TpL~~A~~~ 351 (363)
||+++|-..
T Consensus 202 tP~~~AR~~ 210 (669)
T KOG0818|consen 202 TPVDYARQG 210 (669)
T ss_pred cHHHHHHhc
Confidence 999998543
No 107
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.40 E-value=5.8e-07 Score=88.38 Aligned_cols=94 Identities=22% Similarity=0.344 Sum_probs=86.3
Q ss_pred cCCCCchHHHHHHHHcCCHHHHHHHHHcCCC--CccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 237 SGNDLKMDAIHAFAREGDMDNLLKCIENGVS--VNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHY 314 (363)
Q Consensus 237 ~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~--vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~ 314 (363)
..+....+.||+|+..|+-++|+++|++|.. ++..|..|.|+||-|+..++..++++|++.|+.+-..|..|.||-.-
T Consensus 894 ~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~er 973 (1004)
T KOG0782|consen 894 IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQER 973 (1004)
T ss_pred eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHH
Confidence 3456678999999999999999999999965 67788899999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhC
Q 043342 315 AVVCDREAIAQFLVKQ 330 (363)
Q Consensus 315 A~~~g~~~iv~~Ll~~ 330 (363)
|-+.|..+++.||-..
T Consensus 974 aqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 974 AQQAGDPDLAAYLESR 989 (1004)
T ss_pred HHhcCCchHHHHHhhh
Confidence 9999999999998753
No 108
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.39 E-value=2.6e-07 Score=97.22 Aligned_cols=93 Identities=35% Similarity=0.481 Sum_probs=80.7
Q ss_pred HHHHHHHcCCCCccCC--CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 043342 257 NLLKCIENGVSVNLRD--SEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADI 334 (363)
Q Consensus 257 ~v~~LL~~g~~vn~~d--~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~ 334 (363)
.+..-+..++++|..+ ..|.|+||.||..+..-++++|+++|+++|..|..|+||||.+...|+...+.+|+++|+++
T Consensus 636 ~~~~~~~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~ 715 (785)
T KOG0521|consen 636 RIATALAHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADP 715 (785)
T ss_pred hhhhhhcchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccc
Confidence 3333344555555533 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHh
Q 043342 335 GMKDNDGNSPCHVCE 349 (363)
Q Consensus 335 ~~~d~~G~TpL~~A~ 349 (363)
++.+.+|.+|+++|.
T Consensus 716 ~a~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 716 NAFDPDGKLPLDIAM 730 (785)
T ss_pred cccCccCcchhhHHh
Confidence 999999999999984
No 109
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.27 E-value=1.2e-06 Score=85.86 Aligned_cols=75 Identities=35% Similarity=0.522 Sum_probs=64.1
Q ss_pred hHHHHHHHcCCHHHHHHHH--hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 277 APLHWAVDRGHLNISELLV--SKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 277 TpLh~A~~~g~~~iv~~Ll--~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
-|||+++.....+-+..++ +....++.+|..|+||||+|+..|+...+++|+.+||++.++|++|++|||-|+..
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~ 98 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVST 98 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHc
Confidence 4699998877765554433 33667889999999999999999999999999999999999999999999988754
No 110
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.22 E-value=3.2e-06 Score=79.78 Aligned_cols=85 Identities=27% Similarity=0.411 Sum_probs=70.1
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q 043342 243 MDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREA 322 (363)
Q Consensus 243 ~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~ 322 (363)
.--|..||+.|+.+.|+.|++.|.++|.+|....+||.+|+..||..++++|+++|+-...-..+|.-. ||++.+ ..
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLn--d~ 113 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALN--DR 113 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhh--HH
Confidence 457999999999999999999999999999999999999999999999999999999766545556444 555543 34
Q ss_pred HHHHHHhC
Q 043342 323 IAQFLVKQ 330 (363)
Q Consensus 323 iv~~Ll~~ 330 (363)
|-++|+.+
T Consensus 114 IR~mllsy 121 (516)
T KOG0511|consen 114 IRRMLLSY 121 (516)
T ss_pred HHHHHHHH
Confidence 45566654
No 111
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.21 E-value=5.2e-06 Score=78.41 Aligned_cols=73 Identities=25% Similarity=0.304 Sum_probs=64.4
Q ss_pred ChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 043342 276 RAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVC 348 (363)
Q Consensus 276 ~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A 348 (363)
.--|..||+.|..+.++.|++.|.++|..|+....||.+|+.+||..+|++|+++||-...-..+|...+.=|
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhh
Confidence 4468899999999999999999999999999999999999999999999999999987766666777665433
No 112
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.21 E-value=9.6e-07 Score=85.36 Aligned_cols=77 Identities=22% Similarity=0.336 Sum_probs=71.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHh
Q 043342 273 SEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVK-QNADIGMKDNDGNSPCHVCE 349 (363)
Q Consensus 273 ~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~-~Gad~~~~d~~G~TpL~~A~ 349 (363)
.++..++++|+..|.+..++.+.-.|.|++.+|.+.+|+||.|+..|+.+++++|+. .+.+++.+|..|+|||+-|.
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 346678999999999999999999999999999999999999999999999999997 58999999999999998774
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.15 E-value=1.7e-06 Score=91.17 Aligned_cols=88 Identities=35% Similarity=0.522 Sum_probs=81.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 043342 241 LKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR 320 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~ 320 (363)
.|.++||.|+..|..-.+.+|++.|+++|.+|..|+||||.+...|+...+..|+.+|++.++.+.+|.+||++|....+
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAAN 734 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhcc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHHH
Q 043342 321 EAIAQFLV 328 (363)
Q Consensus 321 ~~iv~~Ll 328 (363)
.+++-+|.
T Consensus 735 ~d~~~l~~ 742 (785)
T KOG0521|consen 735 ADIVLLLR 742 (785)
T ss_pred ccHHHHHh
Confidence 66665554
No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.06 E-value=4.2e-06 Score=88.10 Aligned_cols=115 Identities=23% Similarity=0.268 Sum_probs=91.7
Q ss_pred ccCCCCchHHHHHHHHcCCHHHHHHHHHc-CCCCccCCCCCChHHHHHHHcCCHHHHHHH-HhCCCCCCCCCCCCCcHHH
Q 043342 236 ESGNDLKMDAIHAFAREGDMDNLLKCIEN-GVSVNLRDSEGRAPLHWAVDRGHLNISELL-VSKNADVNAKDNEGQTPLH 313 (363)
Q Consensus 236 ~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~-g~~vn~~d~~g~TpLh~A~~~g~~~iv~~L-l~~gadin~~d~~G~TpLh 313 (363)
......|++.+|.++..+..-.+..+++- +......|.+|...+|+ |..++.+..-+| .-.|..++.+|..||||||
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLH 646 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccc
Confidence 34566789999999999999999999885 65566777888889999 445555554444 4568999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCC------CCCCCCCcHHHHHhcC
Q 043342 314 YAVVCDREAIAQFLVKQNADIG------MKDNDGNSPCHVCESD 351 (363)
Q Consensus 314 ~A~~~g~~~iv~~Ll~~Gad~~------~~d~~G~TpL~~A~~~ 351 (363)
+|+.+|+..++..|+..|++.. ..+..|.|+.++|-++
T Consensus 647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~ 690 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARAN 690 (975)
T ss_pred hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcc
Confidence 9999999999999998776543 3345688998888765
No 115
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.04 E-value=1.4e-05 Score=69.04 Aligned_cols=69 Identities=20% Similarity=0.222 Sum_probs=53.9
Q ss_pred CCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 043342 265 GVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKN-ADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNAD 333 (363)
Q Consensus 265 g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g-adin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad 333 (363)
+.++|.+|..|+|+|+.|+..|..+.+.+|+.+| +.+.+.|..|.+++.+|-+.|...+++.|.++-.+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 3467778888888888888888888888888888 77888888888888888888888888887775433
No 116
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.89 E-value=2.1e-05 Score=77.95 Aligned_cols=66 Identities=29% Similarity=0.357 Sum_probs=61.7
Q ss_pred cccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCC
Q 043342 235 EESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNAD 300 (363)
Q Consensus 235 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad 300 (363)
+...+..|.|+||+||+.|+..+.++|+=+|+++..+|..|+|+|.||-..|..+++.+|+++|+.
T Consensus 654 ~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 654 ETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCP 719 (749)
T ss_pred ccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCC
Confidence 345677889999999999999999999999999999999999999999999999999999999985
No 117
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.56 E-value=0.00034 Score=72.64 Aligned_cols=96 Identities=19% Similarity=0.175 Sum_probs=77.6
Q ss_pred cccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCC----------CCC
Q 043342 235 EESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADV----------NAK 304 (363)
Q Consensus 235 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadi----------n~~ 304 (363)
.++.|.-|+++|+.|+.+.+.+++.+|++++..+ ..+|.+|+..|..++|++++.+-... ...
T Consensus 55 inc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ 127 (822)
T KOG3609|consen 55 INCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPH 127 (822)
T ss_pred hhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCccc
Confidence 3567788899999999999999999999987554 34788899999999999999763322 112
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q 043342 305 DNEGQTPLHYAVVCDREAIAQFLVKQNADIGMK 337 (363)
Q Consensus 305 d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~ 337 (363)
-..+.|||.+||.+++.+|+++|+++|+.+...
T Consensus 128 ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 128 FTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred CCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 235789999999999999999999999887543
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.27 E-value=0.00031 Score=68.78 Aligned_cols=64 Identities=22% Similarity=0.285 Sum_probs=55.4
Q ss_pred HHHHHHHHhCCCCCCCC------CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 288 LNISELLVSKNADVNAK------DNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 288 ~~iv~~Ll~~gadin~~------d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
...+++|.+++.+.|.. +..-.|+||||+..|..++|.+||+.|+|+.++|..|.||..++.++
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nk 473 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANK 473 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccH
Confidence 66788999998877653 44467999999999999999999999999999999999999988743
No 119
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.24 E-value=0.0007 Score=58.70 Aligned_cols=71 Identities=14% Similarity=0.153 Sum_probs=62.9
Q ss_pred cccCCCCchHHHHHHHHcCCHHHHHHHHHcC-CCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 043342 235 EESGNDLKMDAIHAFAREGDMDNLLKCIENG-VSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKD 305 (363)
Q Consensus 235 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g-~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d 305 (363)
.+.+|..|+|+|.+|+..|..+.+.+|+.+| +.+...|..+.+.+.+|-..|+..+++.|.+.-.+-...+
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~ 76 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPM 76 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcc
Confidence 4667889999999999999999999999999 8899999999999999999999999999988754433333
No 120
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.92 E-value=0.0018 Score=36.97 Aligned_cols=27 Identities=37% Similarity=0.625 Sum_probs=16.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 043342 308 GQTPLHYAVVCDREAIAQFLVKQNADI 334 (363)
Q Consensus 308 G~TpLh~A~~~g~~~iv~~Ll~~Gad~ 334 (363)
|.||+|+|+..++.+++++|+++|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666665544
No 121
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.88 E-value=0.003 Score=65.90 Aligned_cols=110 Identities=20% Similarity=0.315 Sum_probs=87.8
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcC----CCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 043342 240 DLKMDAIHAFAREGDMDNLLKCIENG----VSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYA 315 (363)
Q Consensus 240 ~~g~t~Lh~Aa~~g~~~~v~~LL~~g----~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A 315 (363)
..+..-...||..|+...|+.+++.. .++|..|.-|+++||+|+.+.+.+++++|++.+..+ .-+|-+|
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~a 95 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLA 95 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHH
Confidence 34456788899999999999998753 567889999999999999999999999999987765 4589999
Q ss_pred HHcCCHHHHHHHHhCCCCC----------CCCCCCCCcHHHHHh--cCchHHH
Q 043342 316 VVCDREAIAQFLVKQNADI----------GMKDNDGNSPCHVCE--SDWPWML 356 (363)
Q Consensus 316 ~~~g~~~iv~~Ll~~Gad~----------~~~d~~G~TpL~~A~--~~~~~~~ 356 (363)
+..|..++|++++.+-... ...-..+-||+.+|+ +|++-++
T Consensus 96 I~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~ 148 (822)
T KOG3609|consen 96 IAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQ 148 (822)
T ss_pred HHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHH
Confidence 9999999999999763221 223346789999996 4454443
No 122
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=96.81 E-value=0.00052 Score=72.76 Aligned_cols=93 Identities=28% Similarity=0.404 Sum_probs=72.2
Q ss_pred cCCCCchHHHHHHHHcCCHHHHHHHH-HcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCC------CCCCCC
Q 043342 237 SGNDLKMDAIHAFAREGDMDNLLKCI-ENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNA------KDNEGQ 309 (363)
Q Consensus 237 ~~~~~g~t~Lh~Aa~~g~~~~v~~LL-~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~------~d~~G~ 309 (363)
..+..+...+|.++ .++++...+++ -.|..++.+|..|+||||||+.+|+..++..|+..|++.++ ....|.
T Consensus 603 eld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ 681 (975)
T KOG0520|consen 603 ELDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGK 681 (975)
T ss_pred hhcccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCC
Confidence 34555666788844 45555555444 46788999999999999999999999999999988776543 345699
Q ss_pred cHHHHHHHcCCHHHHHHHHhC
Q 043342 310 TPLHYAVVCDREAIAQFLVKQ 330 (363)
Q Consensus 310 TpLh~A~~~g~~~iv~~Ll~~ 330 (363)
|+-.+|...|+..+.-+|-+.
T Consensus 682 ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 682 TAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred chhhhhhcccccchHHHHhhh
Confidence 999999999999888777653
No 123
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.60 E-value=0.0041 Score=35.37 Aligned_cols=28 Identities=50% Similarity=0.930 Sum_probs=20.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHhCCCCCC
Q 043342 275 GRAPLHWAVDRGHLNISELLVSKNADVN 302 (363)
Q Consensus 275 g~TpLh~A~~~g~~~iv~~Ll~~gadin 302 (363)
|.||+|+|+..++.++++.|++.|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5677777777777777777777766553
No 124
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.31 E-value=0.0076 Score=59.36 Aligned_cols=71 Identities=23% Similarity=0.349 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCCCcc------CCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 043342 255 MDNLLKCIENGVSVNL------RDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLV 328 (363)
Q Consensus 255 ~~~v~~LL~~g~~vn~------~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll 328 (363)
...+.+|.+++.+.|. .+..-.|+||+|+..|...+|.+||+.|+|+..+|..|+||..++. +.++-..++
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHHH
Confidence 4567777777766643 3444779999999999999999999999999999999999998876 444444333
No 125
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=90.78 E-value=1.3 Score=39.97 Aligned_cols=91 Identities=20% Similarity=0.238 Sum_probs=64.1
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCccCC----CCCChHHHHHHH--cCCHHHHHHHHhCC-CCCCC---CCCCCCcHH
Q 043342 243 MDAIHAFAREGDMDNLLKCIENGVSVNLRD----SEGRAPLHWAVD--RGHLNISELLVSKN-ADVNA---KDNEGQTPL 312 (363)
Q Consensus 243 ~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d----~~g~TpLh~A~~--~g~~~iv~~Ll~~g-adin~---~d~~G~TpL 312 (363)
.++|-+++..+..+++.+|+.+= +....| ..+.--+-++.. .....+++.+|.+| +++|. +-+.|.|-|
T Consensus 180 ~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtML 258 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTML 258 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHH
Confidence 56788888777888888888641 111111 112223444433 34678899999987 46665 356899999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC
Q 043342 313 HYAVVCDREAIAQFLVKQNADI 334 (363)
Q Consensus 313 h~A~~~g~~~iv~~Ll~~Gad~ 334 (363)
.-|+..++.+++.+||++||-.
T Consensus 259 DNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 259 DNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred HhHHhcCcHHHHHHHHHcCccc
Confidence 9999999999999999999843
No 126
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=81.95 E-value=3.4 Score=30.51 Aligned_cols=48 Identities=13% Similarity=0.305 Sum_probs=36.1
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhC
Q 043342 243 MDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSK 297 (363)
Q Consensus 243 ~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 297 (363)
...+..|+..|+.++++.+++.+ .++ ...+..|+...+.+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 35678888888888888888654 221 3568888888888888888876
No 127
>PF05969 PSII_Ycf12: Photosystem II complex subunit Ycf12; InterPro: IPR010284 This family represents Ycf12, a core subunit of photosystem II; its function is unknown []. ; GO: 0015979 photosynthesis, 0009523 photosystem II, 0016021 integral to membrane; PDB: 3BZ2_y 3PRR_y 3PRQ_y 4FBY_m 3KZI_y 3BZ1_y 3A0B_y 3A0H_y 3ARC_Y.
Probab=78.92 E-value=1.9 Score=26.51 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=20.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCe
Q 043342 2 SDWQPLLQSILIGLLFSYLVAKLISVVLSFKEENL 36 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (363)
-+|+-++|-..+++|+. ..-++-+.+++|.+||
T Consensus 1 Mn~evi~QL~~l~liv~--aGP~VI~lLa~r~GnL 33 (33)
T PF05969_consen 1 MNLEVIAQLTSLALIVL--AGPLVIFLLAARKGNL 33 (33)
T ss_dssp -----HCCHHHHHHHHH--HHHHHHHHHHHCT---
T ss_pred CcHHHHHHHHHHHHHHH--cccHHhhHHHhhcCCC
Confidence 08999999988888764 5677778888998886
No 128
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=74.16 E-value=6.2 Score=29.08 Aligned_cols=48 Identities=25% Similarity=0.499 Sum_probs=40.0
Q ss_pred ChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 043342 276 RAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQ 330 (363)
Q Consensus 276 ~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 330 (363)
...+..|+..|+.++++.+++.+ .++ ...+..|+..-+.++++.|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 35678999999999999998765 222 4579999999999999999975
No 129
>TIGR02106 cyd_oper_ybgT cyd operon protein YbgT. This model describes a very small (as short as 33 amino acids) protein of unknown function, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It begins with an aromatic motif MWYFXW and appears to contain a membrane-spanning helix. This protein appears to be restricted to the Proteobacteria and exist in a single copy only. We suggest it may be a membrane subunit of the terminal oxidase. The family is named after the E. coli member YbgT. This model excludes the apparently related protein YccB.
Probab=73.92 E-value=6 Score=23.80 Aligned_cols=25 Identities=20% Similarity=0.379 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccC
Q 043342 10 SILIGLLFSYLVAKLISVVLSFKEE 34 (363)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (363)
+=|+|+.+|++++.+..+-++.++|
T Consensus 5 aWilG~~lA~~~~v~~a~w~E~~e~ 29 (30)
T TIGR02106 5 AWILGTLLACAFGVLNAMWLELREA 29 (30)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3489999999999999888887765
No 130
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=72.94 E-value=7.5 Score=35.17 Aligned_cols=56 Identities=21% Similarity=0.205 Sum_probs=44.6
Q ss_pred HHHHHHH--cCCHHHHHHHHHcC-CCCcc---CCCCCChHHHHHHHcCCHHHHHHHHhCCCC
Q 043342 245 AIHAFAR--EGDMDNLLKCIENG-VSVNL---RDSEGRAPLHWAVDRGHLNISELLVSKNAD 300 (363)
Q Consensus 245 ~Lh~Aa~--~g~~~~v~~LL~~g-~~vn~---~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad 300 (363)
-+-++.. .-+..+++++|.+| +++|. +-..|.|-|--|...++.+++.+||++|+-
T Consensus 218 dieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 218 DIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred hHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 4444444 23578899999998 67776 345699999999999999999999999984
No 131
>PRK11677 hypothetical protein; Provisional
Probab=72.52 E-value=3.9 Score=33.98 Aligned_cols=22 Identities=14% Similarity=0.525 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 043342 4 WQPLLQSILIGLLFSYLVAKLI 25 (363)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~ 25 (363)
|.-.+-+++||+|++|+++++.
T Consensus 3 W~~a~i~livG~iiG~~~~R~~ 24 (134)
T PRK11677 3 WEYALIGLVVGIIIGAVAMRFG 24 (134)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 8888889999999999988864
No 132
>PF08173 YbgT_YccB: Membrane bound YbgT-like protein; InterPro: IPR012994 This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in Escherichia coli. Members have a consensus motif (MWYFXW), which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to proteobacteria [].
Probab=70.29 E-value=7.5 Score=23.01 Aligned_cols=23 Identities=17% Similarity=0.322 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q 043342 10 SILIGLLFSYLVAKLISVVLSFK 32 (363)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~ 32 (363)
+=|+|+.+|++++.+..+-++.+
T Consensus 5 aWilG~~lA~~~~i~~a~wlE~~ 27 (28)
T PF08173_consen 5 AWILGVLLACAFGILNAMWLEKR 27 (28)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhc
Confidence 45899999999999988877655
No 133
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=68.45 E-value=9.7 Score=33.31 Aligned_cols=46 Identities=20% Similarity=0.263 Sum_probs=34.1
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 043342 278 PLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVK 329 (363)
Q Consensus 278 pLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 329 (363)
-|.+|+..|-+..+.-.+++|.+++. ++|..|+..++..|+.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 45667778888877777777777653 67888888888888777764
No 134
>PF04931 DNA_pol_phi: DNA polymerase phi; InterPro: IPR007015 Proteins of this family are predominantly nucleolar. The majority are described as transcription factor transactivators. The family also includes the fifth essential DNA polymerase (Pol5p) of Schizosaccharomyces pombe (Fission yeast) and Saccharomyces cerevisiae (Baker's yeast) (2.7.7.7 from EC). Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units.; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006351 transcription, DNA-dependent
Probab=65.61 E-value=34 Score=37.06 Aligned_cols=13 Identities=46% Similarity=0.524 Sum_probs=8.9
Q ss_pred chHHHHHHHHHHH
Q 043342 111 TELDEMFSAATAF 123 (363)
Q Consensus 111 ~~l~~~f~~A~~~ 123 (363)
.++++.|..++..
T Consensus 698 ~~~d~~~~~~l~~ 710 (784)
T PF04931_consen 698 AEVDEEFRSALAK 710 (784)
T ss_pred hhhHHHHHHHHHH
Confidence 3567788887664
No 135
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=62.55 E-value=17 Score=31.84 Aligned_cols=46 Identities=22% Similarity=0.317 Sum_probs=40.9
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHh
Q 043342 245 AIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVS 296 (363)
Q Consensus 245 ~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~ 296 (363)
-|..|+..|-+.++...+++|-+++. +.|..|+...|..++.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 46899999999999999999988764 89999999999999998874
No 136
>PF02419 PsbL: PsbL protein; InterPro: IPR003372 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbL found in PSII. PsbL is located in a gene cluster with PsbE, PsbF and PsbJ (PsbEFJL). Both PsbL and PsbJ (IPR002682 from INTERPRO) are essential for proper assembly of the OEC. Mutations in PsbL prevent the formation of both PSII core dimers and PSII-light harvesting complex []. In addition, both PsbL and PsbJ are involved in the unidirectional flow of electrons, where PsbJ regulates the forward electron flow from D2 (Qa) to the plastoquinone pool, and PsbL prevents the reduction of PSII by back electron flow from plastoquinol protecting PSII from photo-inactivation [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_L 3A0B_l 3ARC_l 1S5L_l 2AXT_l 3BZ2_L 4FBY_L 3PRQ_L 3PRR_L 3KZI_L ....
Probab=62.27 E-value=12 Score=23.42 Aligned_cols=18 Identities=39% Similarity=0.623 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 043342 10 SILIGLLFSYLVAKLISV 27 (363)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~ 27 (363)
|..+|+++-|.++.|+|-
T Consensus 16 SLY~GLllifvl~vLFss 33 (37)
T PF02419_consen 16 SLYWGLLLIFVLAVLFSS 33 (37)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhh
Confidence 788999999999999985
No 137
>PF14147 Spore_YhaL: Sporulation protein YhaL
Probab=59.33 E-value=8.8 Score=26.09 Aligned_cols=14 Identities=36% Similarity=0.897 Sum_probs=10.2
Q ss_pred HHHHHHHHH-HHHHH
Q 043342 10 SILIGLLFS-YLVAK 23 (363)
Q Consensus 10 ~~~~~~~~~-~~~~~ 23 (363)
-+++||+|| ||+.|
T Consensus 7 ~vi~gI~~S~ym~v~ 21 (52)
T PF14147_consen 7 FVIAGIIFSGYMAVK 21 (52)
T ss_pred HHHHHHHHHHHHHHH
Confidence 478899886 66655
No 138
>PRK00753 psbL photosystem II reaction center L; Provisional
Probab=57.82 E-value=14 Score=23.25 Aligned_cols=19 Identities=32% Similarity=0.644 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 043342 9 QSILIGLLFSYLVAKLISV 27 (363)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (363)
-|+..||++-|.+|.|+|-
T Consensus 17 TSLy~GlLlifvl~vLFss 35 (39)
T PRK00753 17 TSLYLGLLLVFVLGILFSS 35 (39)
T ss_pred hhHHHHHHHHHHHHHHHHh
Confidence 4789999999999999984
No 139
>PF00373 FERM_M: FERM central domain; InterPro: IPR019748 The FERM domain (F for 4.1 protein, E for ezrin, R for radixin and M for moesin) is a widespread protein module involved in localising proteins to the plasma membrane []. FERM domains are found in a number of cytoskeletal-associated proteins that associate with various proteins at the interface between the plasma membrane and the cytoskeleton. The FERM domain is located at the N terminus of the majority of FERM-containing proteins [, ], which includes: Band 4.1, which links the spectrin-actin cytoskeleton of erythrocytes to the plasma membrane. Ezrin, a component of the undercoat of the microvilli plasma membrane. Moesin, which is probably involved in binding major cytoskeletal structures to the plasma membrane. Radixin, which is involved in the binding of the barbed end of actin filaments to the plasma membrane in the undercoat of the cell- to-cell adherens junction. Talin, a cytoskeletal protein concentrated in regions of cell-substratum contact and, in lymphocytes, of cell-cell contacts. Filopodin, a slime mold protein that binds actin and which is involved in the control of cell motility and chemotaxis. Merlin (or schwannomin). Protein NBL4. Unconventional myosins X, VIIa and XV, which are mutated in congenital deafness. Focal-adhesion kinases (FAKs), cytoplasmic protein tyrosine kinases involved in signalling through integrins. Janus tyrosine kinases (JAKs), cytoplasmic tyrosine kinases that are non-covalently associated with the cytoplasmic tails of receptors for cytokines or polypeptidic hormones. Non-receptor tyrosine-protein kinase TYK2. Protein-tyrosine phosphatases PTPN3 and PTPN4, enzyme that appear to act at junctions between the membrane and the cytoskeleton. Protein-tyrosine phosphatases PTPN14 and PTP-D1, PTP-RL10 and PTP2E. Caenorhabditis elegans protein phosphatase ptp-1. Ezrin, moesin, and radixin are highly related proteins (ERM protein family), but the other proteins in which the FERM domain is found do not share any region of similarity outside of this domain. ERM proteins are made of three domains, the FERM domain, a central helical domain and a C-terminal tail domain, which binds F-actin. The amino-acid sequence of the FERM domain is highly conserved among ERM proteins and is responsible for membrane association by direct binding to the cytoplasmic domain or tail of integral membrane proteins. ERM proteins are regulated by an intramolecular association of the FERM and C-terminal tail domains that masks their binding sites for other molecules. For cytoskeleton-membrane cross-linking, the dormant molecules becomes activated and the FERM domain attaches to the membrane by binding specific membrane proteins, while the last 34 residues of the tail bind actin filaments. Aside from binding to membranes, the activated FERM domain of ERM proteins can also bind the guanine nucleotide dissociation inhibitor of Rho GTPase (RhoDGI), which suggests that in addition to functioning as a cross-linker, ERM proteins may influence Rho signalling pathways. The crystal structure of the FERM domain reveals that it is composed of three structural modules (F1, F2, and F3) that together form a compact clover-shaped structure []. The FERM domain has also been called the amino-terminal domain, the 30kDa domain, 4.1N30, the membrane-cytoskeletal-linking domain, the ERM-like domain, the ezrin-like domain of the band 4.1 superfamily, the conserved N-terminal region, and the membrane attachment domain [].; PDB: 4DXA_B 2EMS_A 2ZPY_A 1J19_A 2D10_B 2D11_B 1GC6_A 2D2Q_A 2EMT_A 2YVC_A ....
Probab=57.75 E-value=23 Score=28.15 Aligned_cols=82 Identities=23% Similarity=0.315 Sum_probs=55.6
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCC---Cc-------------hhh-------hhh
Q 043342 111 TELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQ---PS-------------ALK-------MTA 167 (363)
Q Consensus 111 ~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~---p~-------------~~~-------~~~ 167 (363)
..++-.|.++...|-. |....+.++-++|-||.-|+..|+++... .+ ++. ...
T Consensus 9 ~~~~lly~Q~~~~vl~----g~~~~~~e~a~~LAAl~~q~~~gd~~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~ 84 (126)
T PF00373_consen 9 ITRHLLYLQARRDVLQ----GRLPCSEEDAIKLAALQLQAEYGDYNSEQEHSSGYIDPEIKEFQLENFIPKAPKLIKKMK 84 (126)
T ss_dssp HHHHHHHHHHHHHHHT----TSSTS-HHHHHHHHHHHHHHHHTSSTTTTTSSTTTTTGSHHCTCGHGTSSHHHHHHCCST
T ss_pred HHHHHHHHHHHHHHHc----CcCCCCHHHHHHHHHHHHHHHhcCCCcccccCcccccccccchhhhhhhhhhHHHHhhhh
Confidence 3456667777776654 44579999999999999999999887211 11 111 112
Q ss_pred hhhH-----HHHHhcCCCCHHHHHhcCccccccc
Q 043342 168 RAKW-----QAWQKLGAMPPEEAMQKYIDIVTEL 196 (363)
Q Consensus 168 ~ak~-----~aw~~~g~t~l~~A~~~yv~~v~~L 196 (363)
...| ..|.+..+++..+|+..|++++..+
T Consensus 85 ~~~~~~~I~~~~~~l~~~s~~~a~~~fl~~~~~~ 118 (126)
T PF00373_consen 85 QKEWEKRILEQHKKLRGMSPEEAKLQFLQICQSL 118 (126)
T ss_dssp HHHHHHHHHHHHHHTTT--HHHHHHHHHHHHCTS
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhcC
Confidence 2233 4778999999999999999999875
No 140
>COG3105 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.73 E-value=17 Score=29.71 Aligned_cols=22 Identities=18% Similarity=0.224 Sum_probs=18.2
Q ss_pred ccchHHHHHHHHHHHHHHhhhh
Q 043342 109 ESTELDEMFSAATAFVAASAAA 130 (363)
Q Consensus 109 e~~~l~~~f~~A~~~v~~~~~~ 130 (363)
-..+|..-|..-++.++++..+
T Consensus 53 ~rqel~~HFa~sAeLlktl~~d 74 (138)
T COG3105 53 YRQELVKHFARSAELLKTLAQD 74 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999988765
No 141
>CHL00184 ycf12 Ycf12; Provisional
Probab=50.31 E-value=11 Score=23.13 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=25.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCe
Q 043342 3 DWQPLLQSILIGLLFSYLVAKLISVVLSFKEENL 36 (363)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (363)
+|+-++|-..+++|++ ..-++-+.+++|.+||
T Consensus 2 N~evi~QL~~l~lIv~--aGP~VI~lLa~r~GnL 33 (33)
T CHL00184 2 NLEVIAQLTSLALIVL--AGPLVIVLLALRKGNL 33 (33)
T ss_pred chhHHHHHHHHHHHHH--ccCHheeehhhccCCC
Confidence 6999999988888764 5666777788888876
No 142
>CHL00038 psbL photosystem II protein L
Probab=50.12 E-value=23 Score=22.21 Aligned_cols=19 Identities=37% Similarity=0.569 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 043342 9 QSILIGLLFSYLVAKLISV 27 (363)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (363)
-|...||++-|.+|.|||-
T Consensus 16 TSLy~GLLlifvl~vlfss 34 (38)
T CHL00038 16 TSLYWGLLLIFVLAVLFSN 34 (38)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 4788999999999999984
No 143
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=48.48 E-value=33 Score=21.09 Aligned_cols=22 Identities=32% Similarity=0.584 Sum_probs=17.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 043342 3 DWQPLLQSILIGLLFSYLVAKL 24 (363)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~ 24 (363)
=|.+|+--++.|++-+..|.-|
T Consensus 10 ~WhDLAAP~iagIi~s~iv~w~ 31 (35)
T PF13940_consen 10 FWHDLAAPIIAGIIASLIVGWL 31 (35)
T ss_pred HHHHhHhHHHHHHHHHHHHHHH
Confidence 3999999999999888776544
No 144
>smart00295 B41 Band 4.1 homologues. Also known as ezrin/radixin/moesin (ERM) protein domains. Present in myosins, ezrin, radixin, moesin, protein tyrosine phosphatases. Plasma membrane-binding domain. These proteins play structural and regulatory roles in the assembly and stabilization of specialized plasmamembrane domains. Some PDZ domain containing proteins bind one or more of this family. Now includes JAKs.
Probab=44.93 E-value=56 Score=28.31 Aligned_cols=82 Identities=22% Similarity=0.238 Sum_probs=57.2
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCC-------------Cc-hhh-------hhhhh
Q 043342 111 TELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQ-------------PS-ALK-------MTARA 169 (363)
Q Consensus 111 ~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~-------------p~-~~~-------~~~~a 169 (363)
..+.-.|.++..-+.. |....+.++..+|-++.-|+..|+++... |. +.. ...+.
T Consensus 97 ~~~~~ly~Q~~~di~~----g~~~~~~~~~~~Laal~~q~~~gd~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~ 172 (207)
T smart00295 97 TRLNLLYLQVRNDILE----GRLPCPEEEALLLAALALQAEFGDYDEELHVLLKELSLKRFLPKQLLDSEKRTLKEWRER 172 (207)
T ss_pred HHHHHHHHHHHHHHHc----CccCCCHHHHHHHHHHHHHHHhcCCChHhcCCccccccceeCChhhhhhccccHHHHHHH
Confidence 3345566666666554 44567899999999999999999887432 11 100 11222
Q ss_pred hHHHHHhcCCCCHHHHHhcCccccccc
Q 043342 170 KWQAWQKLGAMPPEEAMQKYIDIVTEL 196 (363)
Q Consensus 170 k~~aw~~~g~t~l~~A~~~yv~~v~~L 196 (363)
-.+.|.+..+++..+|+.+|++++..+
T Consensus 173 i~~~~~~~~~~s~~~a~~~yl~~~~~l 199 (207)
T smart00295 173 IVSLHKELIGLSPEEAKLKYLELAEKL 199 (207)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHhccc
Confidence 334788888999999999999999886
No 145
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=40.81 E-value=7 Score=40.14 Aligned_cols=62 Identities=27% Similarity=0.335 Sum_probs=44.7
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q 043342 282 AVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNS 343 (363)
Q Consensus 282 A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~T 343 (363)
++..+....+-.|++.++.++..|..|.||+|+++..|...+++.++....+.+.+-..|.+
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~ 464 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI 464 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence 44445555566677788888999999999999999999999998887655554444444433
No 146
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=37.50 E-value=51 Score=23.01 Aligned_cols=22 Identities=27% Similarity=0.658 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 043342 7 LLQSILIGLLFSYLVAKLISVV 28 (363)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~ 28 (363)
..++.++|++|+.+++-++.++
T Consensus 31 ~~~~~Ii~vi~~i~~~~~~~~i 52 (57)
T PF11151_consen 31 FTTAAIIAVIFGIIVANIIAVI 52 (57)
T ss_pred hHHHHHHHHHHHHHHHHHHHHc
Confidence 5678899999999888888754
No 147
>PF07301 DUF1453: Protein of unknown function (DUF1453); InterPro: IPR009916 This family consists of several hypothetical bacterial proteins of around 150 residues in length. The function of this family is unknown. Members of this family seem to be found exclusively in the Order Bacillales.
Probab=35.75 E-value=32 Score=29.09 Aligned_cols=37 Identities=30% Similarity=0.660 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCeeeccCC
Q 043342 4 WQPLLQSILIGLLFSYLVAKLISVVLSFKEENLSITRSN 42 (363)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 (363)
|-+.+-++++|.+|||.+-|... .+.||+++=+.|+.
T Consensus 57 ~~~~l~A~~~G~lFs~~Li~ts~--fEvrd~~Iy~krSk 93 (148)
T PF07301_consen 57 WLEVLEAFLVGALFSYPLIKTSK--FEVRDGQIYLKRSK 93 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhce--EEEECCeEEEeccc
Confidence 77899999999999999988654 34567776666653
No 148
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=32.94 E-value=38 Score=30.71 Aligned_cols=39 Identities=23% Similarity=0.292 Sum_probs=22.9
Q ss_pred HHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCC
Q 043342 262 IENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNAD 300 (363)
Q Consensus 262 L~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad 300 (363)
++.|+--|..|....|+=.+|..+++...-+.|++.|+.
T Consensus 2 le~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 2 LEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred cccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 445555555565566666666666666666666665553
No 149
>KOG3841 consensus TEF-1 and related transcription factor, TEAD family [Transcription]
Probab=32.60 E-value=42 Score=32.59 Aligned_cols=68 Identities=25% Similarity=0.308 Sum_probs=47.3
Q ss_pred CccccccchHHHHHHHHHHHHHHhhhhcCCCCChhhH----hHHhhhhhccccCCCCCCCC--chhhhhhhhhHH
Q 043342 104 DWEGVESTELDEMFSAATAFVAASAAASSQKVSNDVQ----LQLYALYKIATEGPCSAPQP--SALKMTARAKWQ 172 (363)
Q Consensus 104 d~e~~e~~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~----L~lyalykqAt~G~~~~~~p--~~~~~~~~ak~~ 172 (363)
|-|++|+.++++.|.+|+..+--.- ..+..++++-+ -+|.+.|-...-|.-.+.+. +-..+.+|.|-+
T Consensus 74 daegvWSpdIEqsFqEALaiyppcG-rrKIilsdegkmyGRNELIarYIKlrtgktRTrKQVSSHIQVlarrk~r 147 (455)
T KOG3841|consen 74 DAEGVWSPDIEQSFQEALAIYPPCG-RRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLR 147 (455)
T ss_pred ccccccChhHHHHHHHHHhhcCCCC-ceeEEEccCccccchHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Confidence 6799999999999999999886542 23446777764 47788888777777665443 334444554443
No 150
>PF03818 MadM: Malonate/sodium symporter MadM subunit; InterPro: IPR018402 The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM.The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=32.31 E-value=35 Score=24.02 Aligned_cols=14 Identities=29% Similarity=0.700 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHH
Q 043342 8 LQSILIGLLFSYLV 21 (363)
Q Consensus 8 ~~~~~~~~~~~~~~ 21 (363)
+-+|++||+.||.-
T Consensus 43 AIAI~lGLvLAy~G 56 (60)
T PF03818_consen 43 AIAIVLGLVLAYIG 56 (60)
T ss_pred HHHHHHHHHHHHHc
Confidence 45799999999964
No 151
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=32.00 E-value=43 Score=27.45 Aligned_cols=20 Identities=10% Similarity=0.323 Sum_probs=15.2
Q ss_pred chHHHHHHHHHHHHHHhhhh
Q 043342 111 TELDEMFSAATAFVAASAAA 130 (363)
Q Consensus 111 ~~l~~~f~~A~~~v~~~~~~ 130 (363)
.++.+-|...++.+.++..+
T Consensus 46 ~~V~~HF~~ta~Ll~~l~~~ 65 (128)
T PF06295_consen 46 QEVNDHFAQTAELLDNLTQD 65 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45788888888888877654
No 152
>PRK13686 hypothetical protein; Provisional
Probab=30.08 E-value=49 Score=21.63 Aligned_cols=32 Identities=16% Similarity=0.431 Sum_probs=24.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCe
Q 043342 3 DWQPLLQSILIGLLFSYLVAKLISVVLSFKEENL 36 (363)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (363)
+|+-++|-..+++|.. ..-++-+.+++|..||
T Consensus 12 N~Evi~QL~~l~lIv~--aGP~VI~lLa~R~GnL 43 (43)
T PRK13686 12 NLEVIFQLTFVALIVI--AGPVVIFLLAFRGGDL 43 (43)
T ss_pred cHHHHHHHHHHHHHHH--cCCHheehhhhhcCCC
Confidence 5999999988888753 4566667778888775
No 153
>PF09026 CENP-B_dimeris: Centromere protein B dimerisation domain; InterPro: IPR015115 Centromere protein B (CENP-B) interacts with centromeric heterochromatin in chromosomes and binds to a specific subset of alphoid satellite DNA, called the CENP-B box. CENP-B may organise arrays of centromere satellite DNA into a higher order structure, which then directs centromere formation and kinetochore assembly in mammalian chromosomes. The CENP-B dimerisation domain is composed of two alpha-helices, which are folded into an antiparallel configuration. Dimerisation of CENP-B is mediated by this domain, in which monomers dimerise to form a symmetrical, antiparallel, four-helix bundle structure with a large hydrophobic patch in which 23 residues of one monomer form van der Waals contacts with the other monomer. This CENP-B dimer configuration may be suitable for capturing two distant CENP-B boxes during centromeric heterochromatin formation []. ; GO: 0003677 DNA binding, 0003682 chromatin binding, 0006355 regulation of transcription, DNA-dependent, 0000775 chromosome, centromeric region, 0005634 nucleus; PDB: 1UFI_A.
Probab=29.97 E-value=36 Score=26.42 Aligned_cols=14 Identities=21% Similarity=0.247 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHh
Q 043342 114 DEMFSAATAFVAAS 127 (363)
Q Consensus 114 ~~~f~~A~~~v~~~ 127 (363)
--.|..|..++...
T Consensus 43 ~p~fgea~~~~~~v 56 (101)
T PF09026_consen 43 VPEFGEAMAYFTMV 56 (101)
T ss_dssp ---HHHHHHHHHHH
T ss_pred chhHHHHHhhcchH
Confidence 55788888887753
No 154
>PRK14749 hypothetical protein; Provisional
Probab=29.17 E-value=90 Score=18.69 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q 043342 10 SILIGLLFSYLVAKLISVVLSFK 32 (363)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~ 32 (363)
+-|+|+.+|+.++.|-.+-.+.+
T Consensus 5 aWiLG~~lAc~f~ilna~w~E~~ 27 (30)
T PRK14749 5 LWFVGILLMCSLSTLVLVWLDPR 27 (30)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 35889999998888776655543
No 155
>COG4897 CsbA Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.68 E-value=72 Score=23.27 Aligned_cols=18 Identities=28% Similarity=0.552 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 043342 11 ILIGLLFSYLVAKLISVV 28 (363)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~ 28 (363)
+|.+++|-||+..|++.|
T Consensus 4 ~~sAlfFPc~LVvLF~ri 21 (78)
T COG4897 4 IISALFFPCLLVVLFARI 21 (78)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 577889999999998865
No 156
>PRK14740 kdbF potassium-transporting ATPase subunit F; Provisional
Probab=28.11 E-value=1.4e+02 Score=17.76 Aligned_cols=22 Identities=32% Similarity=0.357 Sum_probs=14.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 043342 4 WQPLLQSILIGLLFSYLVAKLI 25 (363)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~ 25 (363)
|-..+...+-..+|.|++.-|+
T Consensus 3 ~~~wls~a~a~~Lf~YLv~ALl 24 (29)
T PRK14740 3 VLDWLSLALATGLFVYLLVALL 24 (29)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 5555555566678889887664
No 157
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=27.79 E-value=43 Score=29.76 Aligned_cols=46 Identities=22% Similarity=0.460 Sum_probs=34.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHH-HHHhCCCC----CCCCCCCCCcHHHHHhc
Q 043342 305 DNEGQTPLHYAVVCDREAIAQ-FLVKQNAD----IGMKDNDGNSPCHVCES 350 (363)
Q Consensus 305 d~~G~TpLh~A~~~g~~~iv~-~Ll~~Gad----~~~~d~~G~TpL~~A~~ 350 (363)
|.+-..|||-|+.-++.+++- |+++..+. +|-.|.+|..+|++|..
T Consensus 219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~ 269 (280)
T KOG4591|consen 219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALC 269 (280)
T ss_pred cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHH
Confidence 344456999999999988874 56666543 47778899999998843
No 158
>PRK13831 conjugal transfer protein TrbI; Provisional
Probab=27.49 E-value=3.2e+02 Score=27.35 Aligned_cols=12 Identities=17% Similarity=-0.061 Sum_probs=6.0
Q ss_pred cccccchHHHHH
Q 043342 106 EGVESTELDEMF 117 (363)
Q Consensus 106 e~~e~~~l~~~f 117 (363)
|++|...|..++
T Consensus 125 ~~~w~~~~~~~~ 136 (432)
T PRK13831 125 EEEWRARLKREQ 136 (432)
T ss_pred HHHHHHHHHHHH
Confidence 445555554444
No 159
>TIGR02507 MtrF tetrahydromethanopterin S-methyltransferase, F subunit. coenzyme M methyltransferase in methanogenic archaea. This methyltranferase is membrane-associated enzyme complex that uses methy-transfer reaction to drive sodium-ion pump. Archaea domain, have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.
Probab=27.14 E-value=1e+02 Score=22.19 Aligned_cols=14 Identities=29% Similarity=0.702 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHH
Q 043342 8 LQSILIGLLFSYLV 21 (363)
Q Consensus 8 ~~~~~~~~~~~~~~ 21 (363)
.+-++||++||..+
T Consensus 42 ~~G~~iG~~~Al~l 55 (65)
T TIGR02507 42 ITGLAYGFLFAVLL 55 (65)
T ss_pred hHHHHHHHHHHHHH
Confidence 35567888888754
No 160
>smart00426 TEA TEA domain.
Probab=26.75 E-value=56 Score=23.71 Aligned_cols=23 Identities=35% Similarity=0.481 Sum_probs=19.6
Q ss_pred CccccccchHHHHHHHHHHHHHH
Q 043342 104 DWEGVESTELDEMFSAATAFVAA 126 (363)
Q Consensus 104 d~e~~e~~~l~~~f~~A~~~v~~ 126 (363)
|.|+.|..++|..|.+|+..+..
T Consensus 1 dg~~vWp~~lE~Af~~aL~~~~~ 23 (68)
T smart00426 1 DAEGVWSPDIEQAFQEALAIYPP 23 (68)
T ss_pred CCCCcCcHHHHHHHHHHHHHcCc
Confidence 35788999999999999998763
No 161
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=26.32 E-value=1.1e+02 Score=18.08 Aligned_cols=17 Identities=41% Similarity=0.659 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 043342 9 QSILIGLLFSYLVAKLI 25 (363)
Q Consensus 9 ~~~~~~~~~~~~~~~~~ 25 (363)
-.+++-+++.|+|-.||
T Consensus 8 g~llv~lLl~YLvYAL~ 24 (29)
T PRK14750 8 GALLVLLLLGYLVYALF 24 (29)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 34555667788887776
No 162
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=25.55 E-value=17 Score=37.46 Aligned_cols=56 Identities=25% Similarity=0.283 Sum_probs=42.0
Q ss_pred HHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q 043342 249 FAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAK 304 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~ 304 (363)
++..+....+-.|++++...+..|..+.+|+|+++..|...+++.++....+++..
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~ 458 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLK 458 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcc
Confidence 33444445555667788888999999999999999999999998887654444333
No 163
>KOG4503 consensus Uncharacterized conserved membrane protein [Function unknown]
Probab=25.38 E-value=73 Score=28.37 Aligned_cols=22 Identities=27% Similarity=0.638 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 043342 4 WQPLLQSILIGLLFSYLVAKLI 25 (363)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~ 25 (363)
-|=++++|++|++|+|++--++
T Consensus 86 LQLflNaiv~~iilyf~~kfi~ 107 (230)
T KOG4503|consen 86 LQLFLNAIVIGIILYFVVKFIV 107 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5778899999999988654433
No 164
>COG5085 Predicted membrane protein [Function unknown]
Probab=25.38 E-value=73 Score=28.37 Aligned_cols=22 Identities=27% Similarity=0.638 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 043342 4 WQPLLQSILIGLLFSYLVAKLI 25 (363)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~ 25 (363)
-|=++++|++|++|+|++--++
T Consensus 86 LQLflNaiv~~iilyf~~kfi~ 107 (230)
T COG5085 86 LQLFLNAIVIGIILYFVVKFIV 107 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5778899999999988654433
No 165
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=24.45 E-value=1.3e+02 Score=19.89 Aligned_cols=25 Identities=24% Similarity=0.304 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 043342 4 WQPLLQSILIGLLFSYLVAKLISVV 28 (363)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (363)
+|..++++..-++|+++++-++-.-
T Consensus 6 ~~~~~~~~~~v~~~~~F~gi~~w~~ 30 (49)
T PF05545_consen 6 LQGFARSIGTVLFFVFFIGIVIWAY 30 (49)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888888888888877665543
No 166
>PHA00022 VII minor coat protein
Probab=22.67 E-value=98 Score=18.09 Aligned_cols=17 Identities=18% Similarity=0.593 Sum_probs=9.9
Q ss_pred HHHHHHHH-HHHHHHHHH
Q 043342 5 QPLLQSIL-IGLLFSYLV 21 (363)
Q Consensus 5 ~~~~~~~~-~~~~~~~~~ 21 (363)
.++.|.+| +|+|.+|-+
T Consensus 3 D~i~q~v~~lglVi~FgL 20 (28)
T PHA00022 3 DTIYQVVIALGLVICFGL 20 (28)
T ss_pred HhHHHHHHHHhHHHhhcc
Confidence 35566554 677666644
No 167
>PRK01026 tetrahydromethanopterin S-methyltransferase subunit G; Provisional
Probab=22.56 E-value=1.1e+02 Score=22.68 Aligned_cols=18 Identities=28% Similarity=0.497 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 043342 11 ILIGLLFSYLVAKLISVV 28 (363)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~ 28 (363)
++|||++.++..++++++
T Consensus 56 ~viGlli~~i~~~~~~~~ 73 (77)
T PRK01026 56 LVIGLLIVLVYIILSPIF 73 (77)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 467777777776666654
No 168
>KOG3533 consensus Inositol 1,4,5-trisphosphate receptor [Signal transduction mechanisms]
Probab=21.96 E-value=2.1e+02 Score=32.93 Aligned_cols=37 Identities=24% Similarity=0.429 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--hhcccCCeeeccCCCCC
Q 043342 8 LQSILIGLLFSYLVAKLISVV--LSFKEENLSITRSNNNN 45 (363)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 45 (363)
.+||++--|.|..+.-||||| +-||+| +.++++..+.
T Consensus 2419 grSIvlTa~LALILvYlFSIiGflffkdD-F~leVD~l~n 2457 (2706)
T KOG3533|consen 2419 GRSIVLTALLALILVYLFSILGFLFFKDD-FYLEVDRLEN 2457 (2706)
T ss_pred CceeHHHHHHHHHHHHHHHHHHHHhcccc-eEEEeccccc
Confidence 367788888888888899987 567776 5566665544
No 169
>PF04210 MtrG: Tetrahydromethanopterin S-methyltransferase, subunit G ; InterPro: IPR005866 This model describes the N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit G in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive a sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of a methyl group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.; GO: 0030269 tetrahydromethanopterin S-methyltransferase activity, 0015948 methanogenesis, 0016021 integral to membrane
Probab=21.75 E-value=97 Score=22.53 Aligned_cols=17 Identities=29% Similarity=0.485 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 043342 11 ILIGLLFSYLVAKLISV 27 (363)
Q Consensus 11 ~~~~~~~~~~~~~~~~~ 27 (363)
+++||++-+++..|+++
T Consensus 53 ~v~Glii~~~~~~l~~~ 69 (70)
T PF04210_consen 53 LVIGLIIFIIYIVLSSM 69 (70)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 45566655555555443
No 170
>PF02936 COX4: Cytochrome c oxidase subunit IV; InterPro: IPR004203 Cytochrome c oxidase, a 13 sub-unit complex (1.9.3.1 from EC) is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit IV. The Dictyostelium discoideum (Slime mould) member of this family is called COX VI. The Saccharomyces cerevisiae protein YGX6_YEAST appears to be the yeast COX IV subunit.; GO: 0004129 cytochrome-c oxidase activity; PDB: 3ABK_Q 3AG1_Q 3ASN_Q 1OCZ_D 2EIN_Q 2OCC_D 2YBB_O 3AG3_D 1OCO_Q 1V55_Q ....
Probab=21.73 E-value=1.4e+02 Score=24.94 Aligned_cols=27 Identities=19% Similarity=0.351 Sum_probs=21.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHH
Q 043342 2 SDWQPLLQSILIGLLFSYLVAKLISVV 28 (363)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (363)
++|.-++-.++++|.|+.++.-++-..
T Consensus 72 gewk~v~~~~~~~i~~s~~l~~~~r~~ 98 (142)
T PF02936_consen 72 GEWKKVFGGVFIFIGFSVLLFIWQRSY 98 (142)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 679988888999998888877776544
No 171
>PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen. The interaction between thrombin and fibrinogen involves two different areas of contact - via the thrombin active site and via a second substrate-binding site known as an exosite. The inhibitor acts by blocking the exosite, rather than by interacting with the active site. The inhibitors are from mosquitoes that feed on human blood and which, by inhibiting thrombin, prevent the blood from clotting and keep it flowing.
Probab=21.49 E-value=90 Score=21.98 Aligned_cols=15 Identities=20% Similarity=0.523 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHh
Q 043342 15 LLFSYLVAKLISVVL 29 (363)
Q Consensus 15 ~~~~~~~~~~~~~~~ 29 (363)
||.||||..|+.+|-
T Consensus 6 ~vialLC~aLva~vQ 20 (65)
T PF10731_consen 6 IVIALLCVALVAIVQ 20 (65)
T ss_pred hHHHHHHHHHHHHHh
Confidence 578899999998663
No 172
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown. They contain a conserved zinc ribbon motif in the N-terminal part and a predicted transmembrane segment in the C-terminal part.
Probab=21.42 E-value=1.9e+02 Score=20.41 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 043342 7 LLQSILIGLLFSYLVAKLIS 26 (363)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~ 26 (363)
..|-|++|+++.+++.-++.
T Consensus 37 ~~~~i~~~~~i~~l~v~~~~ 56 (59)
T PF09889_consen 37 KTQYIFFGIFILFLAVWIFM 56 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35778888888877665543
No 173
>TIGR03758 conj_TIGR03758 integrating conjugative element protein, PFL_4701 family. Members of this family of small, hydrophobic proteins are found occasionally on plasmids such as the Pseudomonas putida TOL (toluene catabolic) plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in regions flanked by markers of conjugative transfer and/or transposition.
Probab=21.04 E-value=1.1e+02 Score=22.07 Aligned_cols=16 Identities=19% Similarity=0.636 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 043342 6 PLLQSILIGLLFSYLV 21 (363)
Q Consensus 6 ~~~~~~~~~~~~~~~~ 21 (363)
..+..+++|++|+.++
T Consensus 17 ~~l~~l~lG~~~~vll 32 (65)
T TIGR03758 17 QAMNTLILGLVLAVLF 32 (65)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3567899999998775
No 174
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=20.70 E-value=1.1e+02 Score=24.99 Aligned_cols=17 Identities=18% Similarity=0.507 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 043342 11 ILIGLLFSYLVAKLISV 27 (363)
Q Consensus 11 ~~~~~~~~~~~~~~~~~ 27 (363)
+|+||||+.|++.+..|
T Consensus 65 ~i~~Ii~gv~aGvIg~I 81 (122)
T PF01102_consen 65 AIIGIIFGVMAGVIGII 81 (122)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred ceeehhHHHHHHHHHHH
Confidence 57888888887765443
No 175
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=20.47 E-value=1.2e+02 Score=25.49 Aligned_cols=22 Identities=27% Similarity=0.460 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 043342 9 QSILIGLLFSYLVAKLISVVLS 30 (363)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~ 30 (363)
=.+|+|++++|+++|..+-...
T Consensus 108 ~~~~lg~~l~fl~~r~ysRkl~ 129 (150)
T COG3086 108 FGAFLGLALGFLLARRYSRKLA 129 (150)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3578899999999998887654
Done!