Query 043342
Match_columns 363
No_of_seqs 497 out of 2464
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 06:32:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.5E-26 5E-31 200.1 14.9 136 184-351 11-146 (169)
2 4b93_B Ankyrin repeat domain-c 99.9 1.2E-26 4.2E-31 215.1 14.2 181 172-353 46-230 (269)
3 3b7b_A Euchromatic histone-lys 99.9 4.3E-26 1.5E-30 205.2 13.6 179 172-351 38-220 (237)
4 1oy3_D Transcription factor in 99.9 3.6E-26 1.2E-30 210.4 13.2 180 171-351 38-268 (282)
5 1yyh_A HN1;, notch 1, ankyrin 99.9 3E-26 1E-30 209.5 11.7 176 175-351 54-233 (253)
6 2f8y_A Notch homolog 1, transl 99.9 1.1E-25 3.7E-30 200.7 14.7 176 175-351 22-201 (223)
7 2dzn_A Probable 26S proteasome 99.9 6.8E-26 2.3E-30 202.5 12.5 178 174-351 32-218 (228)
8 1yyh_A HN1;, notch 1, ankyrin 99.9 5.6E-26 1.9E-30 207.6 12.2 181 171-351 3-200 (253)
9 1ikn_D Protein (I-kappa-B-alph 99.9 1.6E-25 5.4E-30 202.0 14.6 179 173-351 3-194 (236)
10 2dzn_A Probable 26S proteasome 99.9 2.5E-25 8.6E-30 198.8 13.5 174 178-351 2-184 (228)
11 1oy3_D Transcription factor in 99.9 5.3E-26 1.8E-30 209.3 8.7 178 174-351 5-235 (282)
12 3aji_A 26S proteasome non-ATPa 99.9 2.1E-25 7.3E-30 199.9 12.4 178 173-351 35-215 (231)
13 1k1a_A B-cell lymphoma 3-encod 99.9 1.1E-25 3.6E-30 202.7 10.4 185 172-357 40-234 (241)
14 2rfa_A Transient receptor pote 99.9 4.5E-25 1.5E-29 198.1 13.8 175 177-351 2-207 (232)
15 3aji_A 26S proteasome non-ATPa 99.9 9.5E-25 3.3E-29 195.6 14.6 174 178-351 6-182 (231)
16 2xai_A ASB-9, ankyrin repeat a 99.9 2.8E-25 9.5E-30 204.1 10.2 180 171-354 29-212 (261)
17 3hra_A Ankyrin repeat family p 99.9 1.2E-24 4.2E-29 190.8 13.1 176 176-351 3-188 (201)
18 4b93_B Ankyrin repeat domain-c 99.9 1E-24 3.5E-29 202.2 13.0 172 180-351 13-195 (269)
19 3aaa_C Myotrophin, protein V-1 99.9 2.8E-24 9.7E-29 174.6 14.0 112 239-350 4-115 (123)
20 3twr_A Tankyrase-2; ankyrin re 99.9 1.1E-24 3.6E-29 185.8 11.5 143 178-351 8-151 (165)
21 2etb_A Transient receptor pote 99.9 7.2E-25 2.5E-29 200.1 11.2 113 239-351 87-231 (256)
22 3v30_A DNA-binding protein rfx 99.9 2.1E-24 7.1E-29 185.2 13.3 143 178-351 2-145 (172)
23 2rfm_A Putative ankyrin repeat 99.9 2.6E-24 8.8E-29 188.1 13.8 149 171-351 28-177 (192)
24 1s70_B 130 kDa myosin-binding 99.9 5.9E-25 2E-29 204.6 10.3 179 178-357 40-282 (299)
25 3b7b_A Euchromatic histone-lys 99.9 1.8E-24 6.1E-29 194.6 12.8 179 172-351 5-187 (237)
26 3c5r_A BARD-1, BRCA1-associate 99.9 2.6E-24 8.9E-29 178.0 12.5 115 237-351 5-119 (137)
27 3d9h_A CDNA FLJ77766, highly s 99.9 8.5E-25 2.9E-29 203.8 10.7 180 172-354 86-268 (285)
28 3ljn_A Hypothetical protein; a 99.9 4.3E-25 1.5E-29 212.0 7.9 178 171-351 46-254 (364)
29 3f6q_A Integrin-linked protein 99.9 2.3E-24 7.8E-29 186.5 11.6 143 178-351 5-148 (179)
30 1awc_B Protein (GA binding pro 99.9 6.2E-24 2.1E-28 179.0 13.9 113 239-351 31-143 (153)
31 1k1a_A B-cell lymphoma 3-encod 99.9 3.9E-24 1.3E-28 192.4 13.3 180 172-351 3-193 (241)
32 3v31_A Ankyrin repeat family A 99.9 4.9E-24 1.7E-28 182.0 13.1 143 177-351 2-145 (167)
33 2pnn_A Transient receptor pote 99.9 1.3E-24 4.6E-29 200.3 9.8 180 172-351 7-243 (273)
34 1d9s_A Cyclin-dependent kinase 99.9 2.5E-24 8.5E-29 178.2 10.4 116 235-351 5-121 (136)
35 2f8y_A Notch homolog 1, transl 99.9 1E-23 3.5E-28 187.9 15.1 164 188-351 2-168 (223)
36 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-23 4.2E-28 174.0 14.3 114 238-351 10-123 (136)
37 3jxi_A Vanilloid receptor-rela 99.9 2E-24 7E-29 197.3 10.4 173 179-351 6-235 (260)
38 2fo1_E LIN-12 protein; beta-ba 99.9 2.7E-24 9.1E-29 208.1 11.7 185 166-351 154-356 (373)
39 1n11_A Ankyrin; clathrin, BAND 99.9 3E-24 1E-28 210.9 11.9 176 175-351 209-387 (437)
40 2xai_A ASB-9, ankyrin repeat a 99.9 6.2E-24 2.1E-28 195.1 12.4 171 178-351 3-176 (261)
41 4gpm_A Engineered protein OR26 99.9 2E-23 6.9E-28 180.3 14.8 108 244-351 6-113 (169)
42 3utm_A Tankyrase-1; tankyrase, 99.9 4.7E-24 1.6E-28 201.8 11.4 121 238-358 207-331 (351)
43 3v30_A DNA-binding protein rfx 99.9 3.8E-24 1.3E-28 183.6 9.6 142 171-344 29-171 (172)
44 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.2E-23 4.1E-28 180.4 12.6 141 179-351 15-156 (169)
45 3d9h_A CDNA FLJ77766, highly s 99.9 2.6E-23 8.7E-28 193.8 14.1 178 171-351 52-232 (285)
46 2rfa_A Transient receptor pote 99.9 2.1E-23 7.3E-28 187.1 12.9 141 211-351 3-164 (232)
47 3eu9_A Huntingtin-interacting 99.9 9.6E-24 3.3E-28 189.1 10.5 180 172-351 36-220 (240)
48 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.5E-23 5.3E-28 176.7 10.4 114 236-351 30-143 (156)
49 3kea_A K1L; tropism, ANK repea 99.9 5.3E-24 1.8E-28 198.5 8.0 177 171-351 24-205 (285)
50 1wdy_A 2-5A-dependent ribonucl 99.9 4.1E-23 1.4E-27 189.5 13.4 180 171-351 65-263 (285)
51 3utm_A Tankyrase-1; tankyrase, 99.9 2.3E-23 8E-28 197.1 12.0 180 171-351 51-290 (351)
52 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.1E-23 1.4E-27 187.4 13.1 109 240-348 35-144 (239)
53 3ljn_A Hypothetical protein; a 99.9 3.2E-24 1.1E-28 205.9 5.8 181 170-351 12-221 (364)
54 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.3E-23 7.9E-28 176.5 10.5 141 178-351 5-147 (162)
55 1sw6_A Regulatory protein SWI6 99.9 3.6E-24 1.2E-28 203.7 6.0 174 169-351 121-326 (327)
56 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-22 4E-27 164.1 14.0 111 241-351 1-111 (126)
57 3t8k_A Uncharacterized protein 99.9 2.1E-24 7.2E-29 189.4 3.1 112 240-351 36-164 (186)
58 1n11_A Ankyrin; clathrin, BAND 99.9 4.7E-23 1.6E-27 202.3 13.0 182 169-351 5-189 (437)
59 4hbd_A KN motif and ankyrin re 99.9 1.4E-23 4.8E-28 194.9 8.3 167 185-351 84-260 (276)
60 1ikn_D Protein (I-kappa-B-alph 99.9 7.3E-24 2.5E-28 191.0 6.1 180 171-351 38-229 (236)
61 3deo_A Signal recognition part 99.9 1E-22 3.5E-27 177.1 12.9 112 239-351 41-153 (183)
62 1bi7_B P16INK4A, MTS1, multipl 99.9 3.5E-23 1.2E-27 175.3 9.6 111 239-350 9-120 (156)
63 1wdy_A 2-5A-dependent ribonucl 99.9 1.1E-22 3.9E-27 186.5 12.4 188 169-357 29-237 (285)
64 2fo1_E LIN-12 protein; beta-ba 99.9 2.4E-22 8.2E-27 194.3 15.0 175 174-351 90-289 (373)
65 3hra_A Ankyrin repeat family p 99.9 2.6E-22 8.8E-27 175.9 13.0 142 210-351 4-150 (201)
66 3flv_A Acyl-COA-binding domain 99.9 3E-23 1E-27 165.3 6.3 92 110-201 21-112 (119)
67 3ehr_A Osteoclast-stimulating 99.9 1.2E-22 4.1E-27 181.7 11.1 114 238-351 69-183 (222)
68 1hbk_A ACBP, acyl-COA binding 99.9 4.1E-23 1.4E-27 158.2 6.7 87 113-201 2-88 (89)
69 2rfm_A Putative ankyrin repeat 99.9 1.8E-22 6.3E-27 176.3 11.4 117 235-351 28-144 (192)
70 3v31_A Ankyrin repeat family A 99.9 4.1E-22 1.4E-26 169.9 12.5 111 241-351 2-112 (167)
71 3ui2_A Signal recognition part 99.9 3.3E-22 1.1E-26 182.3 12.6 111 239-350 42-153 (244)
72 2etb_A Transient receptor pote 99.9 1E-22 3.6E-27 185.7 8.7 113 238-350 39-181 (256)
73 3eu9_A Huntingtin-interacting 99.9 4E-22 1.4E-26 178.5 12.0 176 175-351 6-187 (240)
74 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.3E-21 4.4E-26 167.7 14.7 114 238-351 10-123 (169)
75 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.7E-22 1.3E-26 169.0 11.1 133 169-333 29-162 (162)
76 2vge_A RELA-associated inhibit 99.9 7.9E-22 2.7E-26 178.3 13.9 115 237-351 16-133 (229)
77 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8.4E-22 2.9E-26 152.2 11.9 93 241-333 1-93 (93)
78 2cop_A Acyl-coenzyme A binding 99.9 7E-23 2.4E-27 162.2 5.8 92 110-205 5-96 (109)
79 1bi7_B P16INK4A, MTS1, multipl 99.9 7.4E-23 2.5E-27 173.3 5.9 143 173-348 7-151 (156)
80 4hbd_A KN motif and ankyrin re 99.9 2.1E-22 7.3E-27 186.8 9.3 161 171-331 104-273 (276)
81 3f6q_A Integrin-linked protein 99.9 3.1E-22 1.1E-26 173.0 9.2 140 170-341 31-171 (179)
82 4g8k_A 2-5A-dependent ribonucl 99.9 9.7E-22 3.3E-26 186.6 12.8 114 238-351 164-283 (337)
83 3fp5_A Acyl-COA binding protei 99.9 1.1E-22 3.7E-27 159.8 4.9 87 113-199 4-90 (106)
84 2pnn_A Transient receptor pote 99.9 1.1E-22 3.9E-27 187.3 5.9 172 175-346 51-272 (273)
85 2l6b_A NR1C; ankyrin, consensu 99.9 3E-22 1E-26 160.5 7.2 109 237-345 4-112 (115)
86 1awc_B Protein (GA binding pro 99.9 3.2E-21 1.1E-25 162.3 13.8 109 242-351 2-110 (153)
87 1st7_A ACBP, acyl-COA-binding 99.9 4.9E-23 1.7E-27 156.8 2.0 85 113-201 1-85 (86)
88 3epy_A Acyl-COA-binding domain 99.9 9.6E-23 3.3E-27 155.6 3.6 85 112-200 3-87 (89)
89 3twr_A Tankyrase-2; ankyrin re 99.9 2.9E-21 1E-25 164.3 13.1 114 238-351 4-118 (165)
90 2wh5_A Acyl-COA-binding domain 99.9 1.5E-22 5E-27 159.2 4.4 91 111-201 6-96 (106)
91 2cqu_A Peroxisomal D3,D2-enoyl 99.9 6.5E-22 2.2E-26 157.7 7.0 90 112-205 15-104 (116)
92 3kea_A K1L; tropism, ANK repea 99.9 3.9E-22 1.3E-26 185.8 6.4 144 204-351 24-171 (285)
93 4g8k_A 2-5A-dependent ribonucl 99.8 1.5E-21 5.3E-26 185.2 10.3 177 170-351 117-311 (337)
94 1bd8_A P19INK4D CDK4/6 inhibit 99.8 9.1E-21 3.1E-25 159.6 13.1 109 242-351 2-111 (156)
95 1d9s_A Cyclin-dependent kinase 99.8 1.5E-21 5E-26 161.4 7.6 130 171-333 5-136 (136)
96 2lbb_A Acyl COA binding protei 99.8 6.3E-22 2.2E-26 152.5 4.7 84 115-201 12-95 (96)
97 1s70_B 130 kDa myosin-binding 99.8 1.1E-20 3.8E-25 175.6 13.6 113 239-351 37-149 (299)
98 3jxi_A Vanilloid receptor-rela 99.8 2.6E-21 8.8E-26 176.7 9.1 141 210-350 4-185 (260)
99 2cb8_A Acyl-COA-binding protei 99.8 5.2E-22 1.8E-26 151.2 3.6 83 114-200 3-85 (87)
100 2vge_A RELA-associated inhibit 99.8 2.5E-22 8.4E-27 181.6 2.0 137 210-346 20-161 (229)
101 1sw6_A Regulatory protein SWI6 99.8 3.3E-22 1.1E-26 190.0 -0.0 102 230-331 118-228 (327)
102 1dcq_A PYK2-associated protein 99.8 2.2E-20 7.5E-25 173.9 11.0 111 241-351 129-248 (278)
103 1n0r_A 4ANK, 4 ankyrin repeats 99.8 4E-20 1.4E-24 149.1 11.1 124 178-333 2-126 (126)
104 3jue_A Arfgap with coiled-coil 99.8 6.4E-20 2.2E-24 177.5 13.6 114 238-351 195-311 (368)
105 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.4E-20 4.8E-25 170.6 8.3 111 240-351 3-113 (239)
106 2jab_A H10-2-G3; HER2, darpin, 99.8 3.6E-20 1.2E-24 153.0 9.9 124 176-331 12-136 (136)
107 2b0o_E UPLC1; arfgap, structur 99.8 1.6E-19 5.4E-24 170.0 13.7 110 242-351 151-269 (301)
108 3lvq_E ARF-GAP with SH3 domain 99.8 1.3E-19 4.6E-24 181.9 13.8 109 243-351 133-250 (497)
109 2b0o_E UPLC1; arfgap, structur 99.8 2.4E-20 8.3E-25 175.6 7.5 108 238-351 186-296 (301)
110 3t8k_A Uncharacterized protein 99.8 1.2E-20 4E-25 165.4 1.8 157 180-338 8-184 (186)
111 1dcq_A PYK2-associated protein 99.8 1.9E-19 6.6E-24 167.5 9.3 96 238-333 165-263 (278)
112 3lvq_E ARF-GAP with SH3 domain 99.8 4.7E-19 1.6E-23 177.9 12.3 140 182-347 136-279 (497)
113 3ehr_A Osteoclast-stimulating 99.8 6E-20 2.1E-24 164.0 5.1 139 172-342 67-207 (222)
114 2zgd_A 3 repeat synthetic anky 99.8 2.9E-18 9.8E-23 136.7 12.2 93 235-327 17-109 (110)
115 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.4E-18 4.7E-23 134.0 10.0 78 274-351 1-78 (93)
116 3c5r_A BARD-1, BRCA1-associate 99.7 2.8E-19 9.5E-24 147.5 2.9 126 175-332 7-133 (137)
117 3jue_A Arfgap with coiled-coil 99.7 5.1E-18 1.7E-22 164.1 10.3 138 212-349 200-345 (368)
118 3aaa_C Myotrophin, protein V-1 99.7 2.9E-18 9.9E-23 138.9 5.6 111 175-317 4-115 (123)
119 3deo_A Signal recognition part 99.7 8E-18 2.7E-22 146.0 7.9 129 173-351 39-169 (183)
120 3ui2_A Signal recognition part 99.7 9.8E-18 3.4E-22 152.5 8.6 123 175-330 42-182 (244)
121 2zgd_A 3 repeat synthetic anky 99.7 4.8E-17 1.6E-21 129.5 9.2 84 268-351 17-100 (110)
122 2l6b_A NR1C; ankyrin, consensu 99.7 9.5E-17 3.2E-21 128.1 7.5 82 270-351 4-85 (115)
123 2aja_A Ankyrin repeat family p 99.7 3.3E-18 1.1E-22 165.9 -1.9 136 179-351 93-235 (376)
124 2aja_A Ankyrin repeat family p 99.7 9E-18 3.1E-22 162.8 1.0 111 240-351 90-209 (376)
125 1mix_A Talin; focal adhesion, 92.0 0.24 8.1E-06 42.7 6.0 84 111-198 16-113 (206)
126 3bo0_B Preprotein translocase 58.1 6.4 0.00022 27.1 2.5 27 3-29 28-57 (65)
127 3arc_L Photosystem II reaction 56.7 11 0.00037 22.6 2.9 19 9-27 15-33 (37)
128 2ksd_A Aerobic respiration con 39.9 5.1 0.00018 31.1 -0.4 41 3-43 51-92 (115)
129 4f7g_A Talin-1; alpha-helix bu 39.7 57 0.002 27.8 6.4 84 111-198 27-124 (222)
130 3bz1_y Protein YCF12; electron 38.4 19 0.00065 22.9 2.1 32 3-36 15-46 (46)
131 2hzd_A Transcriptional enhance 38.3 15 0.00051 26.7 1.9 24 102-125 2-25 (82)
132 3qij_A Protein 4.1; cytoskelet 27.3 76 0.0026 28.5 5.2 78 117-198 114-203 (296)
133 1afo_A Glycophorin A; integral 24.2 45 0.0015 20.4 2.0 19 9-27 9-27 (40)
134 1ef1_A Moesin; membrane, FERM 22.0 1.3E+02 0.0043 26.7 5.6 82 113-198 96-197 (294)
135 1h4r_A Merlin; FERM, neurofibr 20.5 2.2E+02 0.0076 25.3 7.0 82 113-198 116-217 (314)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=1.5e-26 Score=200.11 Aligned_cols=136 Identities=34% Similarity=0.541 Sum_probs=121.1
Q ss_pred HHHhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHHHHHHHHH
Q 043342 184 EAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIE 263 (363)
Q Consensus 184 ~A~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~ 263 (363)
.|..+.+++|+.|+..+.+ .+..+..|.||||+|+..++.++++.|++
T Consensus 11 Aa~~G~~~~v~~Ll~~Gad--------------------------------vn~~d~~g~t~l~~a~~~~~~~~~~~ll~ 58 (169)
T 4gpm_A 11 AAENGNKDRVKDLIENGAD--------------------------------VNASDSDGRTPLHHAAENGHKEVVKLLIS 58 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCC--------------------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCC--------------------------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3566788888888875432 23456778899999999999999999999
Q ss_pred cCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q 043342 264 NGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNS 343 (363)
Q Consensus 264 ~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~T 343 (363)
.|++++.+|..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|.+|+|
T Consensus 59 ~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~T 138 (169)
T 4gpm_A 59 KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRT 138 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcC
Q 043342 344 PCHVCESD 351 (363)
Q Consensus 344 pL~~A~~~ 351 (363)
|||+|+..
T Consensus 139 pL~~A~~~ 146 (169)
T 4gpm_A 139 PLDLAREH 146 (169)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99999865
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.2e-26 Score=215.12 Aligned_cols=181 Identities=17% Similarity=0.243 Sum_probs=137.8
Q ss_pred HHHHhcCCCCHHHHHh-c-CccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHH
Q 043342 172 QAWQKLGAMPPEEAMQ-K-YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIH 247 (363)
Q Consensus 172 ~aw~~~g~t~l~~A~~-~-yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh 247 (363)
+..+..+.+|++.|.. . ...++..|+..+.+. +..+.+|.||++.++..+... .++.....+....+..|.||+|
T Consensus 46 ~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~ 124 (269)
T 4b93_B 46 SAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLH 124 (269)
T ss_dssp -----------------------------CCCCT-TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred cccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccc
Confidence 4455667788887643 2 335677788766654 346778999999888777544 2333445556777888999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 043342 248 AFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFL 327 (363)
Q Consensus 248 ~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~L 327 (363)
.|+..++.+++++|++.|+++|.+|..|+||||+||..|+.+++++|+++|+++|.++..|+||||+|+..|+.++|++|
T Consensus 125 ~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~L 204 (269)
T 4b93_B 125 LACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELL 204 (269)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred cccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHhcCch
Q 043342 328 VKQNADIGMKDNDGNSPCHVCESDWP 353 (363)
Q Consensus 328 l~~Gad~~~~d~~G~TpL~~A~~~~~ 353 (363)
+++|++++.+|.+|+||||+|+++-.
T Consensus 205 l~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 205 LLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 99999999999999999999987743
No 3
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=4.3e-26 Score=205.23 Aligned_cols=179 Identities=21% Similarity=0.299 Sum_probs=156.5
Q ss_pred HHHHhcCCCCHHHHH-hcCccccccccccccccccccCCCCcchhhhhcCCCCCc---ccccccccccccCCCCchHHHH
Q 043342 172 QAWQKLGAMPPEEAM-QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIH 247 (363)
Q Consensus 172 ~aw~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh 247 (363)
+..+..|.++++.|. .+..++++.|+..+.... ..+..+.++++.+...+... .++.......+..+..|.||||
T Consensus 38 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 116 (237)
T 3b7b_A 38 DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD-PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMI 116 (237)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC-CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHH
T ss_pred CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHH
Confidence 334456889999864 578899999998765433 35677889999887776443 3444444566677888999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 043342 248 AFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFL 327 (363)
Q Consensus 248 ~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~L 327 (363)
+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|
T Consensus 117 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 196 (237)
T 3b7b_A 117 WATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLF 196 (237)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 328 VKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 328 l~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+++|++++.+|..|.||||+|+.+
T Consensus 197 l~~gad~~~~d~~g~t~l~~A~~~ 220 (237)
T 3b7b_A 197 LSRDSDVTLKNKEGETPLQCASLN 220 (237)
T ss_dssp HTTTCCTTCCCTTSCCHHHHSCTT
T ss_pred HHcCCCCCccCCCCCCHHHHHHHH
Confidence 999999999999999999999887
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=3.6e-26 Score=210.38 Aligned_cols=180 Identities=23% Similarity=0.251 Sum_probs=138.4
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc---ccccc---------------
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP---VFSSF--------------- 231 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~---ll~~~--------------- 231 (363)
.+..+..|.||++.| ..+..++++.|+..+.+.. ..+..+.++++.+...+.... ++...
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL-VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence 344556688888875 4577888888888765443 356678888887776654321 22111
Q ss_pred -------------------------------ccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCC-CChHH
Q 043342 232 -------------------------------AYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSE-GRAPL 279 (363)
Q Consensus 232 -------------------------------~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~-g~TpL 279 (363)
....+..+..|.||||+|+..|+.+++++|+++|++++.++.. |+|||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 196 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPL 196 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHH
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHH
Confidence 1224556778999999999999999999999999999999865 99999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 280 HWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 280 h~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|.+.
T Consensus 197 ~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~ 268 (282)
T 1oy3_D 197 HLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSD 268 (282)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999765
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=3e-26 Score=209.46 Aligned_cols=176 Identities=18% Similarity=0.214 Sum_probs=156.1
Q ss_pred HhcCCCCHHHHH-hcCccccccccccccccccccCCCCcchhhhhcCCCCC---cccccccccccccCCCCchHHHHHHH
Q 043342 175 QKLGAMPPEEAM-QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPM---GPVFSSFAYEEESGNDLKMDAIHAFA 250 (363)
Q Consensus 175 ~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~---~~ll~~~~~~~~~~~~~g~t~Lh~Aa 250 (363)
+..|.|+++.|. .+..++++.|+..+.+.. ..+..+.++++.+...+.. ..++.......+..+..|.||||+|+
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 132 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 132 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Confidence 567889999864 578899999998766543 4667889999988776643 33444444466777888999999999
Q ss_pred HcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 043342 251 REGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQ 330 (363)
Q Consensus 251 ~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 330 (363)
..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 212 (253)
T 1yyh_A 133 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 212 (253)
T ss_dssp HHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHhcC
Q 043342 331 NADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 331 Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|++++.+|..|.||+|+|+.+
T Consensus 213 ga~~~~~d~~g~tpl~~A~~~ 233 (253)
T 1yyh_A 213 FANRDITDHMDRLPRDIAQER 233 (253)
T ss_dssp TCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCccccccCCCCHHHHHHHc
Confidence 999999999999999999876
No 6
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=1.1e-25 Score=200.71 Aligned_cols=176 Identities=19% Similarity=0.226 Sum_probs=156.2
Q ss_pred HhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc---ccccccccccccCCCCchHHHHHHH
Q 043342 175 QKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIHAFA 250 (363)
Q Consensus 175 ~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh~Aa 250 (363)
+..|.++++.| ..+..++++.|+..+.+.. ..+..+.++++.+...+... .++..........+..|.||||+|+
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 100 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 100 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH
Confidence 56788999986 5578999999998765443 46678899999888777443 3444444466777888999999999
Q ss_pred HcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 043342 251 REGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQ 330 (363)
Q Consensus 251 ~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 330 (363)
..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 101 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 180 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 180 (223)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHhcC
Q 043342 331 NADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 331 Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|++++.+|..|.||+|+|+..
T Consensus 181 ga~~~~~~~~g~t~l~~A~~~ 201 (223)
T 2f8y_A 181 FANRDITDHMDRLPRDIAQER 201 (223)
T ss_dssp TCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCCccccccCCCHHHHHHHh
Confidence 999999999999999999876
No 7
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=6.8e-26 Score=202.53 Aligned_cols=178 Identities=22% Similarity=0.248 Sum_probs=153.9
Q ss_pred HHhcCCCCHHHHH-hcCccccccccccc--cccccccCCCCcchhhhhcCCCCCc---cccccc-ccccccCCCCchHHH
Q 043342 174 WQKLGAMPPEEAM-QKYIDIVTELYPTW--AAGSSLKSKRGQEDAASTDSKAPMG---PVFSSF-AYEEESGNDLKMDAI 246 (363)
Q Consensus 174 w~~~g~t~l~~A~-~~yv~~v~~Ll~~~--~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~-~~~~~~~~~~g~t~L 246 (363)
.+..|.++++.|. .+..++++.|+..+ .......+..+.++++.+...+... .++... ..+.+..+..|.|||
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L 111 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCL 111 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHH
Confidence 4567889999864 57889999999877 3333336678899999887766443 233322 145566778899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 043342 247 HAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKN-ADVNAKDNEGQTPLHYAVVCDREAIAQ 325 (363)
Q Consensus 247 h~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g-adin~~d~~G~TpLh~A~~~g~~~iv~ 325 (363)
|+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.++++
T Consensus 112 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~ 191 (228)
T 2dzn_A 112 HLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191 (228)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHH-hCCCCCCCCCCCCCcHHHHHhcC
Q 043342 326 FLV-KQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 326 ~Ll-~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+ ++|++++.+|..|.||+|+|.++
T Consensus 192 ~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 192 LLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred HHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 999 89999999999999999999876
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=5.6e-26 Score=207.62 Aligned_cols=181 Identities=18% Similarity=0.215 Sum_probs=132.6
Q ss_pred HHHHHhcCCCCHHHHHh-c-------------CccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccc
Q 043342 171 WQAWQKLGAMPPEEAMQ-K-------------YIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYE 234 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A~~-~-------------yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~ 234 (363)
.+..+..|.||++.|.. + ..++++.|+..+.......+..|.++++.+...+.... ++...+.+
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 45667889999998754 3 78999999998877766667899999999888775432 33334556
Q ss_pred cccCCCCchHHHHHHHHcCCHHHHHHHHHcCC-CCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 043342 235 EESGNDLKMDAIHAFAREGDMDNLLKCIENGV-SVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLH 313 (363)
Q Consensus 235 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~-~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh 313 (363)
.+..+..|.||||+|+..|+.+++++|++.+. +++.++..|.||||+|+..|+.+++++|++.|++++.+|..|+||||
T Consensus 83 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 162 (253)
T 1yyh_A 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH 162 (253)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 67778899999999999999999999999986 89999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 314 YAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 314 ~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 163 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 163 WAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE 200 (253)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHC
Confidence 99999999999999999999999999999999999864
No 9
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=1.6e-25 Score=202.01 Aligned_cols=179 Identities=21% Similarity=0.196 Sum_probs=149.9
Q ss_pred HHHhcCCCCHHHHH-hcCccccccccccccc---cccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHH
Q 043342 173 AWQKLGAMPPEEAM-QKYIDIVTELYPTWAA---GSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAI 246 (363)
Q Consensus 173 aw~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~---~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~L 246 (363)
..+..|.++++.|. .+..++++.|+..... .....+..|.++++.+...+... .++...+.+.+..+..|.|||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 45678999999864 5778999999987653 24556778899999888777543 233334455677788999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCC------CccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcC
Q 043342 247 HAFAREGDMDNLLKCIENGVS------VNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDN-EGQTPLHYAVVCD 319 (363)
Q Consensus 247 h~Aa~~g~~~~v~~LL~~g~~------vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~-~G~TpLh~A~~~g 319 (363)
|+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999999865 567788899999999999999999999999999999998 9999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 320 REAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 320 ~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 163 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 163 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred CHHHHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence 99999999999999999999999999999876
No 10
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=2.5e-25 Score=198.81 Aligned_cols=174 Identities=20% Similarity=0.237 Sum_probs=152.8
Q ss_pred CCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc---ccccccc-ccccc-CCCCchHHHHHHHH
Q 043342 178 GAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFA-YEEES-GNDLKMDAIHAFAR 251 (363)
Q Consensus 178 g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~-~~~~~-~~~~g~t~Lh~Aa~ 251 (363)
|.+|++.| ..+..++++.|+..+.......+..+.++++.+...+... .++.... .+... .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 67899986 5678999999999887766667888999999888777543 3333331 22233 77889999999999
Q ss_pred cCCHHHHHHHHHcC--CCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 043342 252 EGDMDNLLKCIENG--VSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVK 329 (363)
Q Consensus 252 ~g~~~~v~~LL~~g--~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 329 (363)
.|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999998 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCCCCCcHHHHHhcC
Q 043342 330 QN-ADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 330 ~G-ad~~~~d~~G~TpL~~A~~~ 351 (363)
+| ++++.+|..|+||||+|+..
T Consensus 162 ~g~~~~~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 162 LGKSAVNWQDKQGWTPLFHALAE 184 (228)
T ss_dssp TTCCCSCCCCTTSCCHHHHHHHT
T ss_pred cCcccccCcCCCCCCHHHHHHHc
Confidence 99 99999999999999999876
No 11
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.92 E-value=5.3e-26 Score=209.26 Aligned_cols=178 Identities=20% Similarity=0.178 Sum_probs=153.8
Q ss_pred HHhcCCCCHHHH-HhcCcccccccccccccc--ccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHH
Q 043342 174 WQKLGAMPPEEA-MQKYIDIVTELYPTWAAG--SSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHA 248 (363)
Q Consensus 174 w~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~--~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~ 248 (363)
.+..|.||++.| ..+..++++.|+..+... ....+..|.|+++.++..+... .++...+.+.+..+..|.||||+
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~ 84 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHL 84 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 456789999986 557889999999876653 4456778999999888777543 23334455667778899999999
Q ss_pred HHHcCCHHHHHHHHHcCCC-----------------------------------------------CccCCCCCChHHHH
Q 043342 249 FAREGDMDNLLKCIENGVS-----------------------------------------------VNLRDSEGRAPLHW 281 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~g~~-----------------------------------------------vn~~d~~g~TpLh~ 281 (363)
|+..|+.+++++|++++++ ++.++..|.||||+
T Consensus 85 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 164 (282)
T 1oy3_D 85 ACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHV 164 (282)
T ss_dssp HTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHH
T ss_pred HHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHH
Confidence 9999999999999998754 67788899999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 282 AVDRGHLNISELLVSKNADVNAKDNE-GQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 282 A~~~g~~~iv~~Ll~~gadin~~d~~-G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 165 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 165 AVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLR 235 (282)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTS
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHc
Confidence 99999999999999999999999865 99999999999999999999999999999999999999999876
No 12
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=2.1e-25 Score=199.90 Aligned_cols=178 Identities=21% Similarity=0.230 Sum_probs=155.1
Q ss_pred HHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHH
Q 043342 173 AWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAF 249 (363)
Q Consensus 173 aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~A 249 (363)
..+..|.++++.| ..+..++++.|+..+.+. ...+..+.++++.+...+... .++.....+.+..+..|.||||+|
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 113 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYA 113 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 4456788999986 567899999999876543 346678899999887766443 233334455566788899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 043342 250 AREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVK 329 (363)
Q Consensus 250 a~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 329 (363)
+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|++
T Consensus 114 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 193 (231)
T 3aji_A 114 ASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVT 193 (231)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHhcC
Q 043342 330 QNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 330 ~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|++++.+|..|.||+|+|...
T Consensus 194 ~ga~~~~~~~~g~t~l~~A~~~ 215 (231)
T 3aji_A 194 QGASIYIENKEEKTPLQVAKGG 215 (231)
T ss_dssp TTCCSCCCCTTSCCHHHHSCHH
T ss_pred CCCCCCCCCCCCCCHHHHHHhh
Confidence 9999999999999999999754
No 13
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.92 E-value=1.1e-25 Score=202.73 Aligned_cols=185 Identities=23% Similarity=0.288 Sum_probs=156.7
Q ss_pred HHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc---ccccccc---cccccCCCCchH
Q 043342 172 QAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFA---YEEESGNDLKMD 244 (363)
Q Consensus 172 ~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~---~~~~~~~~~g~t 244 (363)
+..+..|.+|++.| ..+..++++.|+..+.... ..+..+.++++.+...+... .++.... ...+..+..|.|
T Consensus 40 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t 118 (241)
T 1k1a_A 40 DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM-ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT 118 (241)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCC
T ss_pred CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCc
Confidence 34456688999986 4578899999998766543 35678899999887776543 2333322 145667788999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccCC-CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 043342 245 AIHAFAREGDMDNLLKCIENGVSVNLRD-SEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAI 323 (363)
Q Consensus 245 ~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d-~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~i 323 (363)
|||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 119 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 198 (241)
T 1k1a_A 119 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPL 198 (241)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999999998 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHhcC--chHHHH
Q 043342 324 AQFLVKQNADIGMKDNDGNSPCHVCESD--WPWMLH 357 (363)
Q Consensus 324 v~~Ll~~Gad~~~~d~~G~TpL~~A~~~--~~~~~~ 357 (363)
+++|+++|++++.+|..|.||||+|+.. .+.++.
T Consensus 199 v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~ 234 (241)
T 1k1a_A 199 VRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRG 234 (241)
T ss_dssp HHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC
T ss_pred HHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhh
Confidence 9999999999999999999999999865 444433
No 14
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.92 E-value=4.5e-25 Score=198.10 Aligned_cols=175 Identities=18% Similarity=0.221 Sum_probs=148.4
Q ss_pred cCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc---cccccccccc----ccCCCCchHHHHH
Q 043342 177 LGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFAYEE----ESGNDLKMDAIHA 248 (363)
Q Consensus 177 ~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~----~~~~~~g~t~Lh~ 248 (363)
.|.||++.| ..+..++++.|+..........+..|.++++.+...+... .++....... ...+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 367899986 5578899999998733344556788999999888877543 2333322211 4456789999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCccCCC-------------CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 043342 249 FAREGDMDNLLKCIENGVSVNLRDS-------------EGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYA 315 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~g~~vn~~d~-------------~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A 315 (363)
|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999988765 799999999999999999999999999999999999999999
Q ss_pred HHcCCHHHH----HHHHhCCCCC------CCCCCCCCcHHHHHhcC
Q 043342 316 VVCDREAIA----QFLVKQNADI------GMKDNDGNSPCHVCESD 351 (363)
Q Consensus 316 ~~~g~~~iv----~~Ll~~Gad~------~~~d~~G~TpL~~A~~~ 351 (363)
+..++.+++ ++|+++|+++ +.+|..|+||||+|+.+
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~ 207 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVE 207 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHc
Confidence 999999988 9999999998 58999999999999865
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=9.5e-25 Score=195.64 Aligned_cols=174 Identities=18% Similarity=0.235 Sum_probs=154.2
Q ss_pred CCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCCCchHHHHHHHHcCC
Q 043342 178 GAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDAIHAFAREGD 254 (363)
Q Consensus 178 g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~ 254 (363)
+.++++.| ..+.++.++.++..........+..+.++++.+...+.... ++.....+.+..+..|.||||+|+..|+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 56778875 56789999999987766566677889999998877775432 2333345566778889999999999999
Q ss_pred HHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 043342 255 MDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADI 334 (363)
Q Consensus 255 ~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~ 334 (363)
.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 165 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST 165 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHhcC
Q 043342 335 GMKDNDGNSPCHVCESD 351 (363)
Q Consensus 335 ~~~d~~G~TpL~~A~~~ 351 (363)
+.+|..|.||||+|+..
T Consensus 166 ~~~~~~g~t~L~~A~~~ 182 (231)
T 3aji_A 166 NIQDTEGNTPLHLACDE 182 (231)
T ss_dssp CCCCTTSCCHHHHHHHT
T ss_pred cccCCCCCCHHHHHHHC
Confidence 99999999999999876
No 16
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=2.8e-25 Score=204.08 Aligned_cols=180 Identities=19% Similarity=0.187 Sum_probs=152.4
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc---ccccccccccccCCCCchHHH
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAI 246 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~L 246 (363)
.+..+..|.||++.| ..++.++++.|+..+.+. ...+..+.++++.+...+... .++.. ..+.+ .+..|.|||
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~-~~~~g~t~L 105 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQH-GASVQ-PESDLASPI 105 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSS-CSCTTCCHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCC-CCCCCCCHH
Confidence 344456789999986 557899999999876543 346778899999887766443 22222 22222 244589999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 043342 247 HAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQF 326 (363)
Q Consensus 247 h~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~ 326 (363)
|+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++|. +..|+||||+|+..++.+++++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~ 184 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACL 184 (261)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999996 8899999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHhcCchH
Q 043342 327 LVKQNADIGMKDNDGNSPCHVCESDWPW 354 (363)
Q Consensus 327 Ll~~Gad~~~~d~~G~TpL~~A~~~~~~ 354 (363)
|+++|++++.+|..|+||+|+|+.+-..
T Consensus 185 Ll~~gad~~~~d~~g~tpl~~A~~~~~~ 212 (261)
T 2xai_A 185 LMDFGADTQAKNAEGKRPVELVPPESPL 212 (261)
T ss_dssp HHHTTCCTTCCCTTSCCGGGGSCTTCTH
T ss_pred HHHcCCCCCCcCCCCCChhhhccccccH
Confidence 9999999999999999999999877443
No 17
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=1.2e-24 Score=190.75 Aligned_cols=176 Identities=18% Similarity=0.190 Sum_probs=152.3
Q ss_pred hcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHc
Q 043342 176 KLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFARE 252 (363)
Q Consensus 176 ~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~ 252 (363)
..+.++++.| ..+..+.++.|+..........+..+.++++.+...+... .++...+.+.+..+..|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 3466778875 5678899999998777556667788999999887776443 233334556677788899999999999
Q ss_pred CCHHHHHHHH-HcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCC-----HHHHH
Q 043342 253 GDMDNLLKCI-ENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKN-ADVNAKDNEGQTPLHYAVVCDR-----EAIAQ 325 (363)
Q Consensus 253 g~~~~v~~LL-~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g-adin~~d~~G~TpLh~A~~~g~-----~~iv~ 325 (363)
|+.+++++|+ ..+.+++..+..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .++++
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~ 162 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK 162 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence 9999999999 567799999999999999999999999999999998 9999999999999999999998 99999
Q ss_pred HHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 326 FLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 326 ~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+++|++++.+|..|.||||+|+..
T Consensus 163 ~Ll~~ga~~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 163 LLMENGADQSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHCCCCCCccCCCCCCHHHHHHHc
Confidence 99999999999999999999999864
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.92 E-value=1e-24 Score=202.17 Aligned_cols=172 Identities=22% Similarity=0.278 Sum_probs=131.8
Q ss_pred CCHHHH-HhcCcccccccccccccc-------ccccCCCCcchhhhhcCCCCCc---ccccccccccccCCCCchHHHHH
Q 043342 180 MPPEEA-MQKYIDIVTELYPTWAAG-------SSLKSKRGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIHA 248 (363)
Q Consensus 180 t~l~~A-~~~yv~~v~~Ll~~~~~~-------~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh~ 248 (363)
+++..| ..+.+++|+.|+..+... ....+..+.++++.+...+... ..+...+.+.+..+..|.||||+
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~ 92 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHV 92 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 346665 557889999998766543 2233455677787766554332 23333455667788999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 043342 249 FAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLV 328 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll 328 (363)
||..|+.+++++|++.|++++.++..|.||+|+|+..++.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+
T Consensus 93 A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll 172 (269)
T 4b93_B 93 AALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLL 172 (269)
T ss_dssp HHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHH
T ss_pred HHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCCcHHHHHhcC
Q 043342 329 KQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 329 ~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
++|++++.++..|.||||+|+..
T Consensus 173 ~~gadvn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 173 QHGASINASNNKGNTALHEAVIE 195 (269)
T ss_dssp HTTCCTTCBCTTSCBHHHHHHHT
T ss_pred HCCCCCCccccCCCcHHHHHHHc
Confidence 99999999999999999999876
No 19
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=2.8e-24 Score=174.61 Aligned_cols=112 Identities=31% Similarity=0.447 Sum_probs=106.6
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVC 318 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~ 318 (363)
+..|.|+||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|+++|.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 319 DREAIAQFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 319 g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
++.+++++|+++|++++.+|..|.||||+|..
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 99999999999999999999999999999954
No 20
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=1.1e-24 Score=185.77 Aligned_cols=143 Identities=27% Similarity=0.331 Sum_probs=126.1
Q ss_pred CCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHH
Q 043342 178 GAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMD 256 (363)
Q Consensus 178 g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~ 256 (363)
+.++++.| ..+.+++++.|+.... ......+..|.||||+|+..|+.+
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~-------------------------------~~~~~~~~~g~t~L~~A~~~~~~~ 56 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQS-------------------------------VNCRDIEGRQSTPLHFAAGYNRVS 56 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTT-------------------------------TTCCCTTTTCCCHHHHHHHTTCHH
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCC-------------------------------CCccccccCCCCHHHHHHHcChHH
Confidence 44566664 4567777777775321 122334566789999999999999
Q ss_pred HHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 043342 257 NLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGM 336 (363)
Q Consensus 257 ~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~ 336 (363)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 57 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 57 VVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHhcC
Q 043342 337 KDNDGNSPCHVCESD 351 (363)
Q Consensus 337 ~d~~G~TpL~~A~~~ 351 (363)
+|..|.||||+|.++
T Consensus 137 ~~~~g~t~l~~a~~~ 151 (165)
T 3twr_A 137 KNRDGNTPLDLVKDG 151 (165)
T ss_dssp CCTTSCCTGGGSCTT
T ss_pred cCCCCCChhHhHhcC
Confidence 999999999999876
No 21
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.91 E-value=7.2e-25 Score=200.07 Aligned_cols=113 Identities=22% Similarity=0.332 Sum_probs=108.1
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCC-------------CChHHHHHHHcCCHHHHHHHHh---CCCCCC
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSE-------------GRAPLHWAVDRGHLNISELLVS---KNADVN 302 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~-------------g~TpLh~A~~~g~~~iv~~Ll~---~gadin 302 (363)
+..|.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..|+.+++++|++ .|+++|
T Consensus 87 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n 166 (256)
T 2etb_A 87 FYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE 166 (256)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT
T ss_pred cccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC
Confidence 467999999999999999999999999999999886 9999999999999999999999 999999
Q ss_pred CCCCCCCcHHHHHHH--cCCHH-------HHHHHHhCCCCC-------CCCCCCCCcHHHHHhcC
Q 043342 303 AKDNEGQTPLHYAVV--CDREA-------IAQFLVKQNADI-------GMKDNDGNSPCHVCESD 351 (363)
Q Consensus 303 ~~d~~G~TpLh~A~~--~g~~~-------iv~~Ll~~Gad~-------~~~d~~G~TpL~~A~~~ 351 (363)
.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..
T Consensus 167 ~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 231 (256)
T 2etb_A 167 ATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKE 231 (256)
T ss_dssp CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHh
Confidence 999999999999999 78888 999999999999 99999999999999876
No 22
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.91 E-value=2.1e-24 Score=185.21 Aligned_cols=143 Identities=20% Similarity=0.262 Sum_probs=126.0
Q ss_pred CCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHH
Q 043342 178 GAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMD 256 (363)
Q Consensus 178 g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~ 256 (363)
+.+|++.| ..+.++.++.|+..+.. ..+..+..|.||||+|+..|+.+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~-------------------------------~~~~~~~~g~t~L~~A~~~~~~~ 50 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN-------------------------------LVNKPDERGFTPLIWASAFGEIE 50 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG-------------------------------GGGCCCTTSCCHHHHHHHTTCHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc-------------------------------cccCCCCCCCCHHHHHHHcCCHH
Confidence 45778875 55778888888764331 12445677899999999999999
Q ss_pred HHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 043342 257 NLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGM 336 (363)
Q Consensus 257 ~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~ 336 (363)
++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 51 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 51 TVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHhcC
Q 043342 337 KDNDGNSPCHVCESD 351 (363)
Q Consensus 337 ~d~~G~TpL~~A~~~ 351 (363)
+|..|.||||+|+..
T Consensus 131 ~~~~g~t~l~~A~~~ 145 (172)
T 3v30_A 131 EADSGYTPMDLAVAL 145 (172)
T ss_dssp CCTTSCCHHHHHHHH
T ss_pred cCCCCCCHHHHHHHh
Confidence 999999999999865
No 23
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.91 E-value=2.6e-24 Score=188.08 Aligned_cols=149 Identities=23% Similarity=0.290 Sum_probs=132.7
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHH
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAF 249 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A 249 (363)
.+..+..|.||++.| ..+..++++.|+..+. +.+..+..|.||||+|
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~--------------------------------~~~~~~~~g~t~L~~A 75 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFD--------------------------------KLEDKDIEGSTALIWA 75 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHC--------------------------------CTTCCCTTSCCHHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcc--------------------------------ccccccccCccHHHHH
Confidence 455677788888875 4567788877776332 1233456789999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 043342 250 AREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVK 329 (363)
Q Consensus 250 a~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 329 (363)
+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (192)
T 2rfm_A 76 VKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLE 155 (192)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHhcC
Q 043342 330 QNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 330 ~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|++++.+|..|.||||+|+..
T Consensus 156 ~ga~~~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 156 LGADISARDLTGLTAEASARIF 177 (192)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCCCCCCcCCCCCCHHHHHHHh
Confidence 9999999999999999999865
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.91 E-value=5.9e-25 Score=204.60 Aligned_cols=179 Identities=21% Similarity=0.220 Sum_probs=139.7
Q ss_pred CCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHcCC
Q 043342 178 GAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAREGD 254 (363)
Q Consensus 178 g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~ 254 (363)
+.++++.| ..+.+++++.|+..+.+. ...+..|.++++.+...+... .++...+.+.+..+..|.||||+|+..|+
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 34556654 456777777777766543 335566777887777666433 22223344455666777888888888888
Q ss_pred HHHHHHHHHcCCCCccCC------------------------------------------------------------CC
Q 043342 255 MDNLLKCIENGVSVNLRD------------------------------------------------------------SE 274 (363)
Q Consensus 255 ~~~v~~LL~~g~~vn~~d------------------------------------------------------------~~ 274 (363)
.+++++|+++|++++..+ ..
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 198 (299)
T 1s70_B 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198 (299)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTT
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCC
Confidence 888888888877776554 35
Q ss_pred CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC-ch
Q 043342 275 GRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD-WP 353 (363)
Q Consensus 275 g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~-~~ 353 (363)
|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|.++ ..
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~ 278 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILG 278 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999877 45
Q ss_pred HHHH
Q 043342 354 WMLH 357 (363)
Q Consensus 354 ~~~~ 357 (363)
++.+
T Consensus 279 ~l~~ 282 (299)
T 1s70_B 279 YLEE 282 (299)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 25
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.91 E-value=1.8e-24 Score=194.62 Aligned_cols=179 Identities=22% Similarity=0.330 Sum_probs=156.0
Q ss_pred HHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCCCchHHHHH
Q 043342 172 QAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDAIHA 248 (363)
Q Consensus 172 ~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~Lh~ 248 (363)
+..++.|.++++.| ..+..++++.|+..+.+.. ..+..+.++++.+...+.... ++...+...+..+..|.||||+
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANID-TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL 83 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcC-ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence 34566788999986 5578999999998766443 356778999998887775432 3333344556678889999999
Q ss_pred HHHcCCHHHHHHHHHcC-CCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 043342 249 FAREGDMDNLLKCIENG-VSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFL 327 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~g-~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~L 327 (363)
|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 163 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL 163 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999998 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 328 VKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 328 l~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+++|++++.+|..|.||||+|+..
T Consensus 164 l~~g~~~~~~~~~g~t~L~~A~~~ 187 (237)
T 3b7b_A 164 LAAKCDLHAVNIHGDSPLHIAARE 187 (237)
T ss_dssp HTTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHh
Confidence 999999999999999999999876
No 26
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=2.6e-24 Score=177.99 Aligned_cols=115 Identities=27% Similarity=0.395 Sum_probs=111.3
Q ss_pred cCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 043342 237 SGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAV 316 (363)
Q Consensus 237 ~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~ 316 (363)
..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 317 VCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 317 ~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhc
Confidence 99999999999999999999999999999999865
No 27
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=8.5e-25 Score=203.81 Aligned_cols=180 Identities=19% Similarity=0.192 Sum_probs=151.3
Q ss_pred HHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCCCchHHHHH
Q 043342 172 QAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDAIHA 248 (363)
Q Consensus 172 ~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~Lh~ 248 (363)
+..+..|.||++.| ..+..++++.|+..+.+. ...+..+.++++.+...+.... ++........ .+..|.||||+
T Consensus 86 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~g~t~L~~ 163 (285)
T 3d9h_A 86 NIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-PESDLASPIHE 163 (285)
T ss_dssp CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS-CSCTTSCHHHH
T ss_pred CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC-CCCCCCCHHHH
Confidence 34456788999986 457889999999876543 3466788999998877664432 2222222222 23458999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 043342 249 FAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLV 328 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll 328 (363)
|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|++++. +..|+||||+|+..++.+++++|+
T Consensus 164 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll 242 (285)
T 3d9h_A 164 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLM 242 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999995 889999999999999999999999
Q ss_pred hCCCCCCCCCCCCCcHHHHHhcCchH
Q 043342 329 KQNADIGMKDNDGNSPCHVCESDWPW 354 (363)
Q Consensus 329 ~~Gad~~~~d~~G~TpL~~A~~~~~~ 354 (363)
++|++++.+|.+|+||||+|+.+.+.
T Consensus 243 ~~gad~~~~d~~g~t~l~~A~~~~~~ 268 (285)
T 3d9h_A 243 DFGADTQAKNAEGKRPVELVPPESPL 268 (285)
T ss_dssp HTTCCTTCCCTTSCCGGGGSCTTSHH
T ss_pred HCCCCCCCcCCCCCCHHHHhcCccHH
Confidence 99999999999999999999977533
No 28
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.91 E-value=4.3e-25 Score=211.99 Aligned_cols=178 Identities=17% Similarity=0.185 Sum_probs=152.2
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc---ccccc---cccccc------
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP---VFSSF---AYEEES------ 237 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~---ll~~~---~~~~~~------ 237 (363)
.+..+..|.||++.| ..++.++++.|+..+. ......+.++++.+...+.... ++... ....+.
T Consensus 46 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 122 (364)
T 3ljn_A 46 PTIQNRFGCTALHLACKFGCVDTAKYLASVGE---VHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECD 122 (364)
T ss_dssp TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC---CCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC---CccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcc
Confidence 345566789999986 5678999999998665 4445678999998887775432 22220 111111
Q ss_pred -----------CCCCchHHHHHHHHcC--CHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCC----
Q 043342 238 -----------GNDLKMDAIHAFAREG--DMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNAD---- 300 (363)
Q Consensus 238 -----------~~~~g~t~Lh~Aa~~g--~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad---- 300 (363)
.+..|.||||+|+..| +.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 123 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 202 (364)
T 3ljn_A 123 EREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSL 202 (364)
T ss_dssp CCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSC
T ss_pred hHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc
Confidence 5667899999999999 99999999999999999999999999999999999999999999998
Q ss_pred -CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 301 -VNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 301 -in~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..
T Consensus 203 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 203 RLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRA 254 (364)
T ss_dssp CTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999876
No 29
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=2.3e-24 Score=186.48 Aligned_cols=143 Identities=24% Similarity=0.320 Sum_probs=126.0
Q ss_pred CCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHH
Q 043342 178 GAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMD 256 (363)
Q Consensus 178 g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~ 256 (363)
+.++++.| ..+..++++.|+.... .+.+..+..|.||||+|+..|+.+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~-------------------------------~~~~~~~~~g~t~L~~A~~~~~~~ 53 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTE-------------------------------NDLNQGDDHGFSPLHWACREGRSA 53 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTT-------------------------------SCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCc-------------------------------ccccccCCCCCCHHHHHHHcCcHH
Confidence 45666664 4567777777775322 223445677899999999999999
Q ss_pred HHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 043342 257 NLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGM 336 (363)
Q Consensus 257 ~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~ 336 (363)
++++|++.|++++.++..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 54 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 54 VVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHhcC
Q 043342 337 KDNDGNSPCHVCESD 351 (363)
Q Consensus 337 ~d~~G~TpL~~A~~~ 351 (363)
+|..|.||||+|+..
T Consensus 134 ~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 134 CNKYGEMPVDKAKAP 148 (179)
T ss_dssp CCTTSCCGGGGSCHH
T ss_pred hccCCCCcHHHHHHH
Confidence 999999999999766
No 30
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=6.2e-24 Score=179.03 Aligned_cols=113 Identities=30% Similarity=0.431 Sum_probs=109.5
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVC 318 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~ 318 (363)
+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 110 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEH 110 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 319 DREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 319 g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+.+++++|+++|++++.+|..|.||||+|+.+
T Consensus 111 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 111 NHQEVVELLIKYGADVHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999875
No 31
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.91 E-value=3.9e-24 Score=192.42 Aligned_cols=180 Identities=18% Similarity=0.203 Sum_probs=152.1
Q ss_pred HHHHhcCCCCHHHH-HhcCcccccccccc---ccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHH
Q 043342 172 QAWQKLGAMPPEEA-MQKYIDIVTELYPT---WAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDA 245 (363)
Q Consensus 172 ~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~---~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~ 245 (363)
+..+..|.++++.| ..+.+++++.|+.. ........+..+.++++.+...+... .++...+.+....+..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 82 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA 82 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 34577899999986 55788888888752 22334456778999999888777543 23333445566778889999
Q ss_pred HHHHHHcCCHHHHHHHHHcCC----CCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCC
Q 043342 246 IHAFAREGDMDNLLKCIENGV----SVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKD-NEGQTPLHYAVVCDR 320 (363)
Q Consensus 246 Lh~Aa~~g~~~~v~~LL~~g~----~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d-~~G~TpLh~A~~~g~ 320 (363)
||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence 999999999999999999987 888899999999999999999999999999999999999 889999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 321 EAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 321 ~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.+++++|+++|++++.+|..|.||||+|+..
T Consensus 163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 163 LSMVQLLLQHGANVNAQMYSGSSALHSASGR 193 (241)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999865
No 32
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.91 E-value=4.9e-24 Score=181.97 Aligned_cols=143 Identities=18% Similarity=0.222 Sum_probs=128.6
Q ss_pred cCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCH
Q 043342 177 LGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDM 255 (363)
Q Consensus 177 ~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~ 255 (363)
.|.|+++.| ..+..++++.|+..+. ..+..+..|.||||+|+..|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~--------------------------------~~~~~~~~g~t~L~~A~~~~~~ 49 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQEN--------------------------------VINHTDEEGFTPLMWAAAHGQI 49 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSS--------------------------------CTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCC--------------------------------CcCCCCCCCCCHHHHHHHCCCH
Confidence 367888875 4567788888876432 1234566789999999999999
Q ss_pred HHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 043342 256 DNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIG 335 (363)
Q Consensus 256 ~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~ 335 (363)
+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 50 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 129 (167)
T 3v31_A 50 AVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT 129 (167)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHhcC
Q 043342 336 MKDNDGNSPCHVCESD 351 (363)
Q Consensus 336 ~~d~~G~TpL~~A~~~ 351 (363)
.+|..|.||||+|+..
T Consensus 130 ~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 130 IETDSGYNSMDLAVAL 145 (167)
T ss_dssp CCCTTSCCHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHc
Confidence 9999999999999865
No 33
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=1.3e-24 Score=200.34 Aligned_cols=180 Identities=18% Similarity=0.185 Sum_probs=142.6
Q ss_pred HHHHhcCCCCHHHH-HhcCcccccccccccc----cccc---ccCCCCcchhhhhcCC---CCCc---cccccccc----
Q 043342 172 QAWQKLGAMPPEEA-MQKYIDIVTELYPTWA----AGSS---LKSKRGQEDAASTDSK---APMG---PVFSSFAY---- 233 (363)
Q Consensus 172 ~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~----~~~~---~~~~~g~~~~~~a~~~---~~~~---~ll~~~~~---- 233 (363)
+.++..|.++++.| ..+..++|+.|+.... .... ..+..+.|+++.+... +... .++.....
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 45677788888875 4577888888876322 1111 2466788898877643 4332 23332211
Q ss_pred ------ccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCC--------------CCChHHHHHHHcCCHHHHHH
Q 043342 234 ------EEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDS--------------EGRAPLHWAVDRGHLNISEL 293 (363)
Q Consensus 234 ------~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~--------------~g~TpLh~A~~~g~~~iv~~ 293 (363)
.....+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 1122456899999999999999999999999999999887 79999999999999999999
Q ss_pred HHh---CCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCCC-------CCCCCCCcHHHHHhcC
Q 043342 294 LVS---KNADVNAKDNEGQTPLHYAVVCDR---------EAIAQFLVKQNADIG-------MKDNDGNSPCHVCESD 351 (363)
Q Consensus 294 Ll~---~gadin~~d~~G~TpLh~A~~~g~---------~~iv~~Ll~~Gad~~-------~~d~~G~TpL~~A~~~ 351 (363)
|++ .|+++|.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 999 999999999999999999999998 799999999999997 5899999999999876
No 34
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2.5e-24 Score=178.19 Aligned_cols=116 Identities=21% Similarity=0.251 Sum_probs=111.4
Q ss_pred cccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CCcHHH
Q 043342 235 EESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNE-GQTPLH 313 (363)
Q Consensus 235 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~-G~TpLh 313 (363)
.+..+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+. ++.+++++|+++|++++.+|.. |+||||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 83 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVH 83 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHH
Confidence 45667889999999999999999999999999999999999999999999 9999999999999999999999 999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 314 YAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 314 ~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 84 DAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp HHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 99999999999999999999999999999999999854
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=1e-23 Score=187.86 Aligned_cols=164 Identities=18% Similarity=0.253 Sum_probs=144.3
Q ss_pred cCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcC
Q 043342 188 KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENG 265 (363)
Q Consensus 188 ~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g 265 (363)
+..++++.|+..+.......+..+.++++.+...+.... .+.....+.+..+..|.||||+|+..|+.+++++|++.+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 356788999998877766667889999999888775442 223334556677888999999999999999999999998
Q ss_pred C-CCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q 043342 266 V-SVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSP 344 (363)
Q Consensus 266 ~-~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~Tp 344 (363)
. +++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 161 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP 161 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCH
Confidence 6 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 043342 345 CHVCESD 351 (363)
Q Consensus 345 L~~A~~~ 351 (363)
||+|+..
T Consensus 162 L~~A~~~ 168 (223)
T 2f8y_A 162 LFLAARE 168 (223)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9999864
No 36
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.2e-23 Score=173.97 Aligned_cols=114 Identities=34% Similarity=0.466 Sum_probs=109.1
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 043342 238 GNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVV 317 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~ 317 (363)
....+.|+||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+.
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 318 CDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 318 ~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~ 123 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGN 123 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHC
Confidence 9999999999999999999999999999999865
No 37
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=2e-24 Score=197.33 Aligned_cols=173 Identities=18% Similarity=0.135 Sum_probs=133.2
Q ss_pred CCCHHHH-HhcCccccccccc----cccccccc---cCCCCcchhhhhc---CCCCCc---ccccccc----------cc
Q 043342 179 AMPPEEA-MQKYIDIVTELYP----TWAAGSSL---KSKRGQEDAASTD---SKAPMG---PVFSSFA----------YE 234 (363)
Q Consensus 179 ~t~l~~A-~~~yv~~v~~Ll~----~~~~~~~~---~~~~g~~~~~~a~---~~~~~~---~ll~~~~----------~~ 234 (363)
.++++.| ..+..+.++.|+. .+...... .+..|.++++.+. ..+... .++.... ..
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 85 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSP 85 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccc
Confidence 3445554 4466666666655 33322221 1245777777555 333322 2222211 11
Q ss_pred cccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCC--------------CCCChHHHHHHHcCCHHHHHHHHh---C
Q 043342 235 EESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRD--------------SEGRAPLHWAVDRGHLNISELLVS---K 297 (363)
Q Consensus 235 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d--------------~~g~TpLh~A~~~g~~~iv~~Ll~---~ 297 (363)
....+..|.||||+||..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|++ .
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 165 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK 165 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 23344588999999999999999999999999999998 689999999999999999999999 9
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCC-------CCCCCCCCcHHHHHhcC
Q 043342 298 NADVNAKDNEGQTPLHYAVVCDR---------EAIAQFLVKQNADI-------GMKDNDGNSPCHVCESD 351 (363)
Q Consensus 298 gadin~~d~~G~TpLh~A~~~g~---------~~iv~~Ll~~Gad~-------~~~d~~G~TpL~~A~~~ 351 (363)
|+++|.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|+||||+|+..
T Consensus 166 ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 166 QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHc
Confidence 99999999999999999999887 79999999999998 78999999999999876
No 38
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.91 E-value=2.7e-24 Score=208.08 Aligned_cols=185 Identities=19% Similarity=0.280 Sum_probs=159.1
Q ss_pred hhhhhHHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc---cccccc--cccccCC
Q 043342 166 TARAKWQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP---VFSSFA--YEEESGN 239 (363)
Q Consensus 166 ~~~ak~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~---ll~~~~--~~~~~~~ 239 (363)
...+..+..+..|.||++.| ..++.++++.|+..+.+.. ..+..+.++++.+...+.... ++.... .+.+..+
T Consensus 154 ~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d 232 (373)
T 2fo1_E 154 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPT-IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELD 232 (373)
T ss_dssp HTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCC
T ss_pred hcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCc-ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcC
Confidence 34566777888999999986 5578899999998776544 466788999998888775432 222221 4556678
Q ss_pred CCchHHHHHHHHcC---CHHHHHHHHHcCCCCcc--------CCCCCChHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCC
Q 043342 240 DLKMDAIHAFAREG---DMDNLLKCIENGVSVNL--------RDSEGRAPLHWAVDRGHLNISELLVSKN-ADVNAKDNE 307 (363)
Q Consensus 240 ~~g~t~Lh~Aa~~g---~~~~v~~LL~~g~~vn~--------~d~~g~TpLh~A~~~g~~~iv~~Ll~~g-adin~~d~~ 307 (363)
..|.||||+|+..+ +.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++++ +++|.+|..
T Consensus 233 ~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~ 312 (373)
T 2fo1_E 233 RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDED 312 (373)
T ss_dssp TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTT
T ss_pred CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCC
Confidence 89999999999998 89999999999999886 5678999999999999999999999875 999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 308 GQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 308 G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|+.+
T Consensus 313 g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 313 GKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHc
Confidence 99999999999999999999999999999999999999999876
No 39
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=3e-24 Score=210.89 Aligned_cols=176 Identities=24% Similarity=0.317 Sum_probs=147.1
Q ss_pred HhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCCCchHHHHHHHH
Q 043342 175 QKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDAIHAFAR 251 (363)
Q Consensus 175 ~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~Lh~Aa~ 251 (363)
+..|.++++.| ..+..++++.|+..+... ...+..+.++++.+...+.... ++.....+.+..+..|.||||+|+.
T Consensus 209 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~ 287 (437)
T 1n11_A 209 AWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQ 287 (437)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 34567778875 446677888877755433 3355677888887777664432 2333344556678889999999999
Q ss_pred cCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 043342 252 EGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQN 331 (363)
Q Consensus 252 ~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G 331 (363)
.|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|
T Consensus 288 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 367 (437)
T 1n11_A 288 EGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 367 (437)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHhcC
Q 043342 332 ADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 332 ad~~~~d~~G~TpL~~A~~~ 351 (363)
++++.+|.+|.|||++|.+.
T Consensus 368 a~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 368 ASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp CCSCCCCSSSCCHHHHHHHT
T ss_pred CCCCCCCCCCCCHHHHHHHc
Confidence 99999999999999999866
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.90 E-value=6.2e-24 Score=195.06 Aligned_cols=171 Identities=18% Similarity=0.175 Sum_probs=148.1
Q ss_pred CCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHHHHHcCC
Q 043342 178 GAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHAFAREGD 254 (363)
Q Consensus 178 g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~ 254 (363)
|.||++.| ..+..++++.|+..+.+. ...+..|.++++.+...+... .++...+.+.+..+..|.||||+|+..|+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 67899985 568899999999876543 446778999999888777543 23333455667788899999999999999
Q ss_pred HHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 043342 255 MDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADI 334 (363)
Q Consensus 255 ~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~ 334 (363)
.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 82 ~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 160 (261)
T 2xai_A 82 WDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 160 (261)
T ss_dssp HHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 99999999999998854 45999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHhcC
Q 043342 335 GMKDNDGNSPCHVCESD 351 (363)
Q Consensus 335 ~~~d~~G~TpL~~A~~~ 351 (363)
+. +..|.||||+|+..
T Consensus 161 ~~-~~~g~t~Lh~A~~~ 176 (261)
T 2xai_A 161 NQ-GKGQDSPLHAVART 176 (261)
T ss_dssp TC-CBTTBCHHHHHHHH
T ss_pred CC-CCCCCChHHHHHHc
Confidence 95 88999999999865
No 41
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=2e-23 Score=180.33 Aligned_cols=108 Identities=42% Similarity=0.705 Sum_probs=105.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 043342 244 DAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAI 323 (363)
Q Consensus 244 t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~i 323 (363)
+.|+.||+.|+.++|+.||++|+++|.+|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 324 AQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 324 v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+++|+++|++++.+|.+|+||||+|+..
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~ 113 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAEN 113 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 9999999999999999999999999876
No 42
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.90 E-value=4.7e-24 Score=201.84 Aligned_cols=121 Identities=21% Similarity=0.279 Sum_probs=110.8
Q ss_pred CCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 238 GNDLKMDAIHAFARE---GDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHY 314 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~---g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~ 314 (363)
.+..|.||||+|+.. +..+++++|++.|++++.++..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~ 286 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHR 286 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 345678999999998 55899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC-chHHHHh
Q 043342 315 AVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD-WPWMLHA 358 (363)
Q Consensus 315 A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~-~~~~~~~ 358 (363)
|+..|+.+++++|+++|++++.+|..|+||+|+|... .+|+.+.
T Consensus 287 A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~~~~~~~l~~~ 331 (351)
T 3utm_A 287 AALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSES 331 (351)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSCHHHHHHHHHC
T ss_pred HHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhhHHHHHHHHhc
Confidence 9999999999999999999999999999999999666 4555543
No 43
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=3.8e-24 Score=183.58 Aligned_cols=142 Identities=22% Similarity=0.212 Sum_probs=119.1
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHH
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAF 249 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A 249 (363)
.+..+..|.++++.| ..+..++++.|+..+.+ .+..+..|.||||+|
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~t~L~~A 76 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGAD--------------------------------PHILAKERESALSLA 76 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC--------------------------------TTCCCTTCCCHHHHH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------------------------------chhhcccCCCHHHHH
Confidence 455567788888875 44677778777764321 233456788999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 043342 250 AREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVK 329 (363)
Q Consensus 250 a~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 329 (363)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcH
Q 043342 330 QNADIGMKDNDGNSP 344 (363)
Q Consensus 330 ~Gad~~~~d~~G~Tp 344 (363)
+|+++..++..|.||
T Consensus 157 ~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 157 HILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHSCC-------
T ss_pred HHHHHhcccCCCCCC
Confidence 999999999999988
No 44
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=1.2e-23 Score=180.40 Aligned_cols=141 Identities=31% Similarity=0.394 Sum_probs=126.1
Q ss_pred CCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHHH
Q 043342 179 AMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMDN 257 (363)
Q Consensus 179 ~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~ 257 (363)
.++++.| ..+.+++++.|+..+.+ .+..+..|.||||+|+..|+.++
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~t~L~~A~~~~~~~~ 62 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGAD--------------------------------VNAEDASGWTPLHLAAFNGHLEI 62 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC--------------------------------TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCC--------------------------------CCCCCCCCCCHHHHHHHcCCHHH
Confidence 3456664 45778888888764321 23345678999999999999999
Q ss_pred HHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q 043342 258 LLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMK 337 (363)
Q Consensus 258 v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~ 337 (363)
+++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 63 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 142 (169)
T 2y1l_E 63 VEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQ 142 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHhcC
Q 043342 338 DNDGNSPCHVCESD 351 (363)
Q Consensus 338 d~~G~TpL~~A~~~ 351 (363)
|..|.||||+|+.+
T Consensus 143 ~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 143 DKFGKTAFDISIDN 156 (169)
T ss_dssp CTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHh
Confidence 99999999999866
No 45
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.90 E-value=2.6e-23 Score=193.77 Aligned_cols=178 Identities=16% Similarity=0.146 Sum_probs=146.3
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHH
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIH 247 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh 247 (363)
.+..+..|.|+++.| ..+..++++.|+..+.+ ....+..|.++++.+...+... .++.....+.+..+..|.||||
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 130 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 345567788999986 45788889998887654 3346778889999888777543 2333334556677888899999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 043342 248 AFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFL 327 (363)
Q Consensus 248 ~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~L 327 (363)
+|+..|+.+++++|++.|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 209 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 209 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 9999999999999999998887644 489999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 328 VKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 328 l~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+++|++++. |..|.||||+|+..
T Consensus 210 l~~ga~~~~-~~~g~t~L~~A~~~ 232 (285)
T 3d9h_A 210 LESGADVNQ-GKGQDSPLHAVVRT 232 (285)
T ss_dssp HHTTCCTTC-CBTTBCHHHHHHHT
T ss_pred HHCCCCCCC-CCCCCCHHHHHHHc
Confidence 999999984 88899999999866
No 46
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.90 E-value=2.1e-23 Score=187.11 Aligned_cols=141 Identities=21% Similarity=0.297 Sum_probs=126.3
Q ss_pred CcchhhhhcCCCCCc---ccccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCC-----ccCCCCCChHHHHH
Q 043342 211 GQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSV-----NLRDSEGRAPLHWA 282 (363)
Q Consensus 211 g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~v-----n~~d~~g~TpLh~A 282 (363)
|.++++.+...+... .++...+.+.+..+..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 567888887777543 3444446667778899999999999999999999999999886 66778899999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCC-------------CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHh
Q 043342 283 VDRGHLNISELLVSKNADVNAKDN-------------EGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCE 349 (363)
Q Consensus 283 ~~~g~~~iv~~Ll~~gadin~~d~-------------~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~ 349 (363)
+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 162 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI 162 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999998876 7999999999999999999999999999999999999999998
Q ss_pred cC
Q 043342 350 SD 351 (363)
Q Consensus 350 ~~ 351 (363)
..
T Consensus 163 ~~ 164 (232)
T 2rfa_A 163 LQ 164 (232)
T ss_dssp TC
T ss_pred Hc
Confidence 76
No 47
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.90 E-value=9.6e-24 Score=189.06 Aligned_cols=180 Identities=21% Similarity=0.281 Sum_probs=156.0
Q ss_pred HHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHHH
Q 043342 172 QAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIHA 248 (363)
Q Consensus 172 ~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh~ 248 (363)
+..+..|.++++.| ..+..++++.|+..+..........+.++++.+...+... .++.....+....+..|.||||+
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 115 (240)
T 3eu9_A 36 RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHL 115 (240)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 33455688999986 4578899999999888777666677889999887776443 23333445556678889999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCC-HHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHH
Q 043342 249 FAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGH-LNISELLVSKNADVNAKDN-EGQTPLHYAVVCDREAIAQF 326 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~-~~iv~~Ll~~gadin~~d~-~G~TpLh~A~~~g~~~iv~~ 326 (363)
|+..|+.+++++|+++|++++.++..|.||||+|+..++ ..++++|+..|++++..+. .|.||||+|+..|+.+++++
T Consensus 116 A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 195 (240)
T 3eu9_A 116 AAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISL 195 (240)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHH
Confidence 999999999999999999999999999999999997776 8899999999999999997 99999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 327 LVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 327 Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+++|++++.+|..|.||||+|+..
T Consensus 196 Ll~~g~~~~~~~~~g~t~l~~A~~~ 220 (240)
T 3eu9_A 196 LLEAGANVDAQNIKGESALDLAKQR 220 (240)
T ss_dssp HHHHTCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 9999999999999999999999877
No 48
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.89 E-value=1.5e-23 Score=176.67 Aligned_cols=114 Identities=29% Similarity=0.465 Sum_probs=109.3
Q ss_pred ccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 043342 236 ESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYA 315 (363)
Q Consensus 236 ~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A 315 (363)
+..+..|.||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 30 ~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (156)
T 1bd8_A 30 DALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLA 108 (156)
T ss_dssp TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 4456678999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 316 VVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 316 ~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+..|+.+++++|+++ ++++.+|..|.||||+|+..
T Consensus 109 ~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~ 143 (156)
T 1bd8_A 109 VQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQR 143 (156)
T ss_dssp HHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHS
T ss_pred HHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHc
Confidence 999999999999999 99999999999999999876
No 49
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.89 E-value=5.3e-24 Score=198.50 Aligned_cols=177 Identities=10% Similarity=0.027 Sum_probs=151.9
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCCCchHHHH
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDAIH 247 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~Lh 247 (363)
.+..+..|.||++.| ..+..++++.|+..+.+ +...+|.++++.+...+.... ++...+.+.+..+..|.||||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 100 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGAL---KNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALY 100 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG---GSCCTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHH
Confidence 345567789999986 45788999999986554 344468999999988876542 333345556677889999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccCCCCC-ChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 043342 248 AFAREGDMDNLLKCIENGVSVNLRDSEG-RAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQF 326 (363)
Q Consensus 248 ~Aa~~g~~~~v~~LL~~g~~vn~~d~~g-~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~ 326 (363)
+|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|+++... ..|+||||+|+..|+.+++++
T Consensus 101 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~ 179 (285)
T 3kea_A 101 YAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMIL 179 (285)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHH
Confidence 9999999999999999999999999999 89999999999999999999999887332 289999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcH-HHHHhcC
Q 043342 327 LVKQNADIGMKDNDGNSP-CHVCESD 351 (363)
Q Consensus 327 Ll~~Gad~~~~d~~G~Tp-L~~A~~~ 351 (363)
|+++|++++.+|..|+|| ||+|+..
T Consensus 180 Ll~~gad~n~~~~~g~t~~L~~A~~~ 205 (285)
T 3kea_A 180 LLDYMTSTNTNNSLLFIPDIKLAIDN 205 (285)
T ss_dssp HHHHHHHTCTTCCCBCCTTHHHHHHH
T ss_pred HHHcCCCCCcccCCCCChHHHHHHHc
Confidence 999999999999999998 9999865
No 50
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=4.1e-23 Score=189.46 Aligned_cols=180 Identities=21% Similarity=0.201 Sum_probs=151.6
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccC---------
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESG--------- 238 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~--------- 238 (363)
.+..+..|.+|++.| ..+..++++.|+..+.... ..+..+.++++.+...+.... ++..........
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 143 (285)
T 1wdy_A 65 PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143 (285)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHh
Confidence 334456788999986 5578899999998765443 356778899998877765432 222222222222
Q ss_pred -CCCchHHHHHHHHcCCHHHHHHHHHc-CCCCccCCCCCChHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCcHH
Q 043342 239 -NDLKMDAIHAFAREGDMDNLLKCIEN-GVSVNLRDSEGRAPLHWAVDRGH----LNISELLVSKNADVNAKDNEGQTPL 312 (363)
Q Consensus 239 -~~~g~t~Lh~Aa~~g~~~~v~~LL~~-g~~vn~~d~~g~TpLh~A~~~g~----~~iv~~Ll~~gadin~~d~~G~TpL 312 (363)
+..|.||||+|+..|+.+++++|++. |++++.++..|+||||+|+..++ .+++++|+++|++++.+|..|+|||
T Consensus 144 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L 223 (285)
T 1wdy_A 144 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL 223 (285)
T ss_dssp TTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 66789999999999999999999997 99999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHhcC
Q 043342 313 HYAVVCDREAIAQFLVK-QNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 313 h~A~~~g~~~iv~~Ll~-~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+|+..|+.+++++|++ +|++++.+|..|.||||+|+..
T Consensus 224 ~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~ 263 (285)
T 1wdy_A 224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 263 (285)
T ss_dssp HHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHc
Confidence 99999999999999999 8999999999999999999875
No 51
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.89 E-value=2.3e-23 Score=197.06 Aligned_cols=180 Identities=21% Similarity=0.201 Sum_probs=152.8
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchHHHH
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMDAIH 247 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t~Lh 247 (363)
.+..+..|.||++.| ..++.++++.|+..+.+. ...+..+.++++.+...+... .++.....+.+..+..|.||||
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~ 129 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLH 129 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 344466789999986 557899999999876654 346678999999888877543 2333344556677888999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccCC------------------------------------------------------C
Q 043342 248 AFAREGDMDNLLKCIENGVSVNLRD------------------------------------------------------S 273 (363)
Q Consensus 248 ~Aa~~g~~~~v~~LL~~g~~vn~~d------------------------------------------------------~ 273 (363)
+|+..|+.+++++|+++|++++..+ .
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 209 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQ 209 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCC
Confidence 9999999999999999999887644 4
Q ss_pred CCChHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 274 EGRAPLHWAVDR---GHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 274 ~g~TpLh~A~~~---g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
.|.||||+|+.. +..+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 210 ~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 210 SHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAAL 289 (351)
T ss_dssp TCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 567999999998 55899999999999999999999999999999999999999999999999999999999999986
Q ss_pred C
Q 043342 351 D 351 (363)
Q Consensus 351 ~ 351 (363)
.
T Consensus 290 ~ 290 (351)
T 3utm_A 290 A 290 (351)
T ss_dssp H
T ss_pred c
Confidence 5
No 52
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=4.1e-23 Score=187.36 Aligned_cols=109 Identities=30% Similarity=0.447 Sum_probs=104.7
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 043342 240 DLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCD 319 (363)
Q Consensus 240 ~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g 319 (363)
..+.|+||.|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 114 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN 114 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCC-cHHHHH
Q 043342 320 REAIAQFLVKQNADIGMKDNDGN-SPCHVC 348 (363)
Q Consensus 320 ~~~iv~~Ll~~Gad~~~~d~~G~-TpL~~A 348 (363)
+.+++++|+++|++++.++..|. ||||+|
T Consensus 115 ~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 115 NVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred CHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 99999999999999999998877 999999
No 53
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.89 E-value=3.2e-24 Score=205.91 Aligned_cols=181 Identities=18% Similarity=0.166 Sum_probs=151.1
Q ss_pred hHHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHH
Q 043342 170 KWQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHA 248 (363)
Q Consensus 170 k~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~ 248 (363)
..+..+..|.++++.| ..+++++|+.|+..+.+. ...+..+.++++.++..+....+-..+.......+..|.||||+
T Consensus 12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~ 90 (364)
T 3ljn_A 12 NRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSP-TIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHL 90 (364)
T ss_dssp ----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHH
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHH
Confidence 3445566778899985 568999999999877544 44677899999988887755432222222223344578999999
Q ss_pred HHHcCCHHHHHHHHHc----CCCCcc-----------------CCCCCChHHHHHHHcC--CHHHHHHHHhCCCCCCCCC
Q 043342 249 FAREGDMDNLLKCIEN----GVSVNL-----------------RDSEGRAPLHWAVDRG--HLNISELLVSKNADVNAKD 305 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~----g~~vn~-----------------~d~~g~TpLh~A~~~g--~~~iv~~Ll~~gadin~~d 305 (363)
|+..|+.+++++|++. |.+++. ++..|.||||+|+..| +.+++++|+++|++++.+|
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d 170 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD 170 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence 9999999999999998 777776 8889999999999999 9999999999999999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCC-----CCCCCCCCCcHHHHHhcC
Q 043342 306 NEGQTPLHYAVVCDREAIAQFLVKQNAD-----IGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 306 ~~G~TpLh~A~~~g~~~iv~~Ll~~Gad-----~~~~d~~G~TpL~~A~~~ 351 (363)
..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..
T Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~ 221 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILI 221 (364)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHc
Confidence 9999999999999999999999999999 999999999999999876
No 54
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=2.3e-23 Score=176.52 Aligned_cols=141 Identities=26% Similarity=0.384 Sum_probs=124.1
Q ss_pred CCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHH
Q 043342 178 GAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMD 256 (363)
Q Consensus 178 g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~ 256 (363)
..++++.| ..+..++++.|+..+.. .+..+..|.||||+|+. |+.+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~--------------------------------~~~~~~~g~t~L~~A~~-~~~~ 51 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVN--------------------------------VNAQNGFGRTALQVMKL-GNPE 51 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCC--------------------------------TTCCCTTSCCHHHHCCS-SCHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCC--------------------------------ccccCccCccHHHHHHc-CcHH
Confidence 34566664 55778888888763321 23345678899999999 9999
Q ss_pred HHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CC
Q 043342 257 NLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNAD-IG 335 (363)
Q Consensus 257 ~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad-~~ 335 (363)
++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++
T Consensus 52 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 131 (162)
T 1ihb_A 52 IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG 131 (162)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 69
Q ss_pred CCCCCCCcHHHHHhcC
Q 043342 336 MKDNDGNSPCHVCESD 351 (363)
Q Consensus 336 ~~d~~G~TpL~~A~~~ 351 (363)
.+|..|.||||+|+..
T Consensus 132 ~~~~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 132 HRNHKGDTACDLARLY 147 (162)
T ss_dssp CCCTTSCCHHHHHHHT
T ss_pred CcCCCCCcHHHHHHHc
Confidence 9999999999999876
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.89 E-value=3.6e-24 Score=203.68 Aligned_cols=174 Identities=13% Similarity=0.116 Sum_probs=137.6
Q ss_pred hhHHH-HHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCC------CCcccccccccccccCCC
Q 043342 169 AKWQA-WQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKA------PMGPVFSSFAYEEESGND 240 (363)
Q Consensus 169 ak~~a-w~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~------~~~~ll~~~~~~~~~~~~ 240 (363)
+..+. .+..|.||+|.| ..++.++|+.|+..+.+.. ..+..|.|+++.+...+ .+..++..+....+..+.
T Consensus 121 ~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n-~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~ 199 (327)
T 1sw6_A 121 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL-YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS 199 (327)
T ss_dssp CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCC
Confidence 44455 677899999986 5578899999998876554 57778999999888754 344566666566777888
Q ss_pred CchHHHHHHHH----cCCHHHHHHHHHc--------------------CCCCccCCCCCChHHHHHHHcCCHHHHHHHHh
Q 043342 241 LKMDAIHAFAR----EGDMDNLLKCIEN--------------------GVSVNLRDSEGRAPLHWAVDRGHLNISELLVS 296 (363)
Q Consensus 241 ~g~t~Lh~Aa~----~g~~~~v~~LL~~--------------------g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~ 296 (363)
.|.||||+|+. .|+.+++++|++. |++++.++..|+||||+|+. +++|++
T Consensus 200 ~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~ 273 (327)
T 1sw6_A 200 MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIA 273 (327)
T ss_dssp TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHH
T ss_pred CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHH
Confidence 99999999999 8999999999876 88899999999999999985 888888
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 297 KNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 297 ~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+ ++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.+
T Consensus 274 ~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 274 N--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp H--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred h--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 8 6889999999999999999999999999999999999999999999999753
No 56
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.2e-22 Score=164.11 Aligned_cols=111 Identities=37% Similarity=0.645 Sum_probs=107.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 043342 241 LKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR 320 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~ 320 (363)
.|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 321 EAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 321 ~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.+++++|+++|++++.+|..|.||||+|+..
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 111 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARN 111 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999865
No 57
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=2.1e-24 Score=189.37 Aligned_cols=112 Identities=14% Similarity=0.158 Sum_probs=103.6
Q ss_pred CCchHHHHHHHHcCCH----HHHHHHHHcCCCCccCCCCCChHHHHHHHcCC------HHHHHHHHhCCCCCCCCCCCCC
Q 043342 240 DLKMDAIHAFAREGDM----DNLLKCIENGVSVNLRDSEGRAPLHWAVDRGH------LNISELLVSKNADVNAKDNEGQ 309 (363)
Q Consensus 240 ~~g~t~Lh~Aa~~g~~----~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~------~~iv~~Ll~~gadin~~d~~G~ 309 (363)
..|+||||+|+..|+. +++++||++|+++|.+|..|+||||+|+..++ .+++++|+++|+++|.+|..|+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 4589999999999975 58999999999999999999999999999887 6789999999999999999999
Q ss_pred -cHHHHHHHcC-----CHHHHHHHHh-CCCCCCCCCCCCCcHHHHHhcC
Q 043342 310 -TPLHYAVVCD-----REAIAQFLVK-QNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 310 -TpLh~A~~~g-----~~~iv~~Ll~-~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
||||+|+..+ +.+++++|++ +|++++.+|..|+||||+|++.
T Consensus 116 ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~ 164 (186)
T 3t8k_A 116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC 164 (186)
T ss_dssp BCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTT
T ss_pred chHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHc
Confidence 9999999954 3569999999 9999999999999999999875
No 58
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=4.7e-23 Score=202.35 Aligned_cols=182 Identities=21% Similarity=0.257 Sum_probs=111.3
Q ss_pred hhHHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcc--cccccccccccCCCCchHH
Q 043342 169 AKWQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDA 245 (363)
Q Consensus 169 ak~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~ 245 (363)
+.++..+..|.||++.| ..+++++|+.|+..+.+.. ..+..+.++++.++..+.... ++.....+.+..+..|.||
T Consensus 5 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~-~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 83 (437)
T 1n11_A 5 ISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPN-VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTP 83 (437)
T ss_dssp ----------CCHHHHHHHHTCHHHHHHHHHTTCCSC-CSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCH
T ss_pred CCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCH
Confidence 34455666677777764 4466777777776554332 244556667766665554321 2222233445556666777
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 043342 246 IHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQ 325 (363)
Q Consensus 246 Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~ 325 (363)
||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+++++..+..|.||||+|+..|+.++++
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 163 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 163 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 77777777777777777777777777777777777777777777777777777766666666777777777777777777
Q ss_pred HHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 326 FLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 326 ~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+++|++++..+..|.||||+|+..
T Consensus 164 ~Ll~~g~~~~~~~~~g~t~L~~A~~~ 189 (437)
T 1n11_A 164 LLLERDAHPNAAGKNGLTPLHVAVHH 189 (437)
T ss_dssp HHHHTTCCTTCCCSSCCCHHHHHHHT
T ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHc
Confidence 77777777766666677777666654
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=194.87 Aligned_cols=167 Identities=20% Similarity=0.289 Sum_probs=136.4
Q ss_pred HHhcCccccccccccccc-cccccCCCCcchhhhhcCCCCCc---ccccccccccccCCCCchHHHHHHH-----HcCCH
Q 043342 185 AMQKYIDIVTELYPTWAA-GSSLKSKRGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIHAFA-----REGDM 255 (363)
Q Consensus 185 A~~~yv~~v~~Ll~~~~~-~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh~Aa-----~~g~~ 255 (363)
+..++...++.++..... ..+..+..|.|+++.+...+... .++.....+.+..+..|.||||+|+ ..++.
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~ 163 (276)
T 4hbd_A 84 LVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDI 163 (276)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhH
Confidence 445555665555543222 13345666777777776666432 3333333456677888999999999 66889
Q ss_pred HHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCC
Q 043342 256 DNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVK-QNADI 334 (363)
Q Consensus 256 ~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~-~Gad~ 334 (363)
++++.|++.|..++..+..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++ +|+++
T Consensus 164 ~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 164 ETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp HHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 89999
Q ss_pred CCCCCCCCcHHHHHhcC
Q 043342 335 GMKDNDGNSPCHVCESD 351 (363)
Q Consensus 335 ~~~d~~G~TpL~~A~~~ 351 (363)
+.+|..|+||||+|+..
T Consensus 244 ~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 244 SLTDRDGSTALMVALDA 260 (276)
T ss_dssp TCCCTTSCCHHHHHHHH
T ss_pred cCcCCCCCCHHHHHHHc
Confidence 99999999999999865
No 60
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.89 E-value=7.3e-24 Score=191.03 Aligned_cols=180 Identities=18% Similarity=0.169 Sum_probs=151.4
Q ss_pred HHHHHhcCCCCHHHHH-hcCccccccccccccccccccCCCCcchhhhhcCCCCCc---ccccccc-----cccccCCCC
Q 043342 171 WQAWQKLGAMPPEEAM-QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFA-----YEEESGNDL 241 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~-----~~~~~~~~~ 241 (363)
.+..+..|.||++.|. .+..++++.|+..+.+.. ..+..+.++++.+...+... .++.... ......+..
T Consensus 38 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (236)
T 1ikn_D 38 LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE-LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN 116 (236)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC-CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence 4556677999999864 578899999998776543 36678899999887776443 2333221 123567778
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCccCCC-CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 043342 242 KMDAIHAFAREGDMDNLLKCIENGVSVNLRDS-EGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR 320 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~ 320 (363)
|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc
Confidence 99999999999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCC--CCCCCCCcHHHHHhcC
Q 043342 321 EAIAQFLVKQNADIG--MKDNDGNSPCHVCESD 351 (363)
Q Consensus 321 ~~iv~~Ll~~Gad~~--~~d~~G~TpL~~A~~~ 351 (363)
.+++++|+++|++.. ..+..|.||.+.+.+.
T Consensus 197 ~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 197 TRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp HHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred hHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 999999999999876 8899999998876644
No 61
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=1e-22 Score=177.07 Aligned_cols=112 Identities=26% Similarity=0.320 Sum_probs=107.9
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHH
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKD-NEGQTPLHYAVV 317 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d-~~G~TpLh~A~~ 317 (363)
+..|.||||+|+..|+.++++.|++ |++++.+|..|+||||+|+..|+.+++++|+++|+++|.++ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578999999999999999999999 99999999999999999999999999999999999999998 899999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 318 CDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 318 ~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 9999999999999999999999999999999863
No 62
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=3.5e-23 Score=175.27 Aligned_cols=111 Identities=24% Similarity=0.333 Sum_probs=70.0
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc-HHHHHHH
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQT-PLHYAVV 317 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~T-pLh~A~~ 317 (363)
+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 344556666666666666666666666666666666666666654 56666666666666666666666666 6666666
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 318 CDREAIAQFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 318 ~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
.|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 120 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEE 120 (156)
T ss_dssp HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 666666666666666666666666666666654
No 63
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.88 E-value=1.1e-22 Score=186.52 Aligned_cols=188 Identities=25% Similarity=0.307 Sum_probs=156.4
Q ss_pred hhHHHH-HhcCCCCHHHHH-hcCccccccccccccccccccCCCCcchhhhhcCCCCCc--ccccccccccccCCCCchH
Q 043342 169 AKWQAW-QKLGAMPPEEAM-QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESGNDLKMD 244 (363)
Q Consensus 169 ak~~aw-~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~~~~g~t 244 (363)
+..+.. +..|.++++.|. .+..++++.|+..+.... ..+..+.++++.+...+... .++...+.+.+..+..|.|
T Consensus 29 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 107 (285)
T 1wdy_A 29 ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV-LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFT 107 (285)
T ss_dssp CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCB
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCC
Confidence 444544 566889999865 578899999998766543 35678889999887766443 2333334455667788999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccC----------CCCCChHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHH
Q 043342 245 AIHAFAREGDMDNLLKCIENGVSVNLR----------DSEGRAPLHWAVDRGHLNISELLVSK-NADVNAKDNEGQTPLH 313 (363)
Q Consensus 245 ~Lh~Aa~~g~~~~v~~LL~~g~~vn~~----------d~~g~TpLh~A~~~g~~~iv~~Ll~~-gadin~~d~~G~TpLh 313 (363)
|||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++. |++++.+|..|+||||
T Consensus 108 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~ 187 (285)
T 1wdy_A 108 AFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI 187 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHH
T ss_pred HHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHH
Confidence 999999999999999999999998877 77899999999999999999999988 9999999999999999
Q ss_pred HHHHcCC----HHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC--chHHHH
Q 043342 314 YAVVCDR----EAIAQFLVKQNADIGMKDNDGNSPCHVCESD--WPWMLH 357 (363)
Q Consensus 314 ~A~~~g~----~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~--~~~~~~ 357 (363)
+|+..++ .+++++|+++|++++.+|..|.||||+|+.. .+.++.
T Consensus 188 ~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 237 (285)
T 1wdy_A 188 HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 237 (285)
T ss_dssp HHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 9999999 8999999999999999999999999999876 444443
No 64
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.88 E-value=2.4e-22 Score=194.34 Aligned_cols=175 Identities=11% Similarity=0.120 Sum_probs=148.8
Q ss_pred HHhcCCCCHHHHHhcCccccccccccccccccccC-CCCcchhhhhcCCCCCcc---ccc-------ccccccccCCCCc
Q 043342 174 WQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKS-KRGQEDAASTDSKAPMGP---VFS-------SFAYEEESGNDLK 242 (363)
Q Consensus 174 w~~~g~t~l~~A~~~yv~~v~~Ll~~~~~~~~~~~-~~g~~~~~~a~~~~~~~~---ll~-------~~~~~~~~~~~~g 242 (363)
-+..|.++++.|.....++++.|+.. .....+ ..|.|+++.++..+.... ++. ..+.+.+..+..|
T Consensus 90 ~~~~g~t~L~~Aa~~~~~~~~~L~~~---~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g 166 (373)
T 2fo1_E 90 PEPESPIKLHTEAAGSYAITEPITRE---SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDE 166 (373)
T ss_dssp ----CCCHHHHHHHSSSCCCSCCSTT---TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTS
T ss_pred CCCCCccHHHHHhcCCchHHHHhccc---cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCC
Confidence 35678999999888878888888753 233334 689999999888775532 221 3455667788899
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCC---CCCCCCCCCCCcHHHHHHHcC
Q 043342 243 MDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKN---ADVNAKDNEGQTPLHYAVVCD 319 (363)
Q Consensus 243 ~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g---adin~~d~~G~TpLh~A~~~g 319 (363)
.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|+..+
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~ 246 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNE 246 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSC
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999998 899999999999999999998
Q ss_pred ---CHHHHHHHHhCCCCCCC--------CCCCCCcHHHHHhcC
Q 043342 320 ---REAIAQFLVKQNADIGM--------KDNDGNSPCHVCESD 351 (363)
Q Consensus 320 ---~~~iv~~Ll~~Gad~~~--------~d~~G~TpL~~A~~~ 351 (363)
+.+++++|+++|++++. +|..|.||||+|+..
T Consensus 247 ~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~ 289 (373)
T 2fo1_E 247 GRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQV 289 (373)
T ss_dssp STTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSS
T ss_pred CcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHh
Confidence 89999999999999986 677999999999876
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.88 E-value=2.6e-22 Score=175.90 Aligned_cols=142 Identities=14% Similarity=0.203 Sum_probs=126.9
Q ss_pred CCcchhhhhcCCCCCc---ccccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcC
Q 043342 210 RGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRG 286 (363)
Q Consensus 210 ~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g 286 (363)
.+.++++.++..+... .++.....+.+..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQG 83 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4566777777666443 4455555566778889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHhcC
Q 043342 287 HLNISELLV-SKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQN-ADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 287 ~~~iv~~Ll-~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G-ad~~~~d~~G~TpL~~A~~~ 351 (363)
+.+++++|+ ..+++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..
T Consensus 84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 84 RTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGL 150 (201)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHS
T ss_pred CHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHh
Confidence 999999999 668899999999999999999999999999999999 99999999999999999853
No 66
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.88 E-value=3e-23 Score=165.34 Aligned_cols=92 Identities=33% Similarity=0.603 Sum_probs=86.6
Q ss_pred cchHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcC
Q 043342 110 STELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKY 189 (363)
Q Consensus 110 ~~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~y 189 (363)
.++|+++|+.|+++|++++.+|..+|+++++|+||+||||||+|+|+.++|++|++.+++||+||+++++|+.++||+.|
T Consensus 21 ~~dLe~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~Y 100 (119)
T 3flv_A 21 QSMHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAY 100 (119)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 46899999999999999998877789999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccc
Q 043342 190 IDIVTELYPTWA 201 (363)
Q Consensus 190 v~~v~~Ll~~~~ 201 (363)
|+++..|++...
T Consensus 101 I~~v~~l~~~~~ 112 (119)
T 3flv_A 101 VEEMKKIIETMP 112 (119)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHhhCC
Confidence 999999987543
No 67
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.2e-22 Score=181.66 Aligned_cols=114 Identities=26% Similarity=0.454 Sum_probs=109.7
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHH
Q 043342 238 GNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSK-NADVNAKDNEGQTPLHYAV 316 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~-gadin~~d~~G~TpLh~A~ 316 (363)
.+..|.||||+||..|+.++++.|++.|++++.+|..|+||||+||..|+.+++++|++. |+++|.+|..|+||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 355678999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 317 VCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 317 ~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSH
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcch
Confidence 99999999999999999999999999999999864
No 68
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.88 E-value=4.1e-23 Score=158.21 Aligned_cols=87 Identities=32% Similarity=0.739 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCccc
Q 043342 113 LDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDI 192 (363)
Q Consensus 113 l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~~ 192 (363)
|++.|..|+++|++++. ..+++++++|+||+||||||+|+|+.++|++|++.+++||+||.++++|+.++||+.||++
T Consensus 2 l~~~F~~A~~~v~~l~~--~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~~ 79 (89)
T 1hbk_A 2 MAQVFEECVSFINGLPR--TINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVDI 79 (89)
T ss_dssp HHHHHHHHHHHHHHSCT--TCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCC--cCCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 68999999999998764 2479999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc
Q 043342 193 VTELYPTWA 201 (363)
Q Consensus 193 v~~Ll~~~~ 201 (363)
|..|++.|.
T Consensus 80 v~~l~~~~~ 88 (89)
T 1hbk_A 80 VSEIFPYWQ 88 (89)
T ss_dssp HHHHCTTTT
T ss_pred HHHHccccc
Confidence 999998775
No 69
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.88 E-value=1.8e-22 Score=176.26 Aligned_cols=117 Identities=26% Similarity=0.432 Sum_probs=112.8
Q ss_pred cccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 235 EESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHY 314 (363)
Q Consensus 235 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~ 314 (363)
.+..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 315 AVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 315 A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 144 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKY 144 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999999864
No 70
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.87 E-value=4.1e-22 Score=169.94 Aligned_cols=111 Identities=25% Similarity=0.384 Sum_probs=108.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 043342 241 LKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR 320 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~ 320 (363)
.|.||||.|+..|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 321 EAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 321 ~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.+++++|+++|++++.+|..|.||||+|+..
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 112 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHG 112 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999876
No 71
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=3.3e-22 Score=182.30 Aligned_cols=111 Identities=26% Similarity=0.334 Sum_probs=107.2
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHH
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKD-NEGQTPLHYAVV 317 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d-~~G~TpLh~A~~ 317 (363)
+..|.||||+|++.|+.++++.|++ |+++|.+|..|+||||+||..|+.+++++|+++|+++|.++ ..|+||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 4568999999999999999999999 99999999999999999999999999999999999999998 889999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhc
Q 043342 318 CDREAIAQFLVKQNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 318 ~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~ 350 (363)
.|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 999999999999999999999999999999984
No 72
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.87 E-value=1e-22 Score=185.67 Aligned_cols=113 Identities=20% Similarity=0.275 Sum_probs=105.7
Q ss_pred CCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCccC-----------CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 043342 238 GNDLKMDAIHAFARE---GDMDNLLKCIENGVSVNLR-----------DSEGRAPLHWAVDRGHLNISELLVSKNADVNA 303 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~---g~~~~v~~LL~~g~~vn~~-----------d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~ 303 (363)
.+..|.||||+|+.. |+.+++++|++.|++++.. |..|.||||+|+..|+.+++++|+++|+++|.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 577899999999999 9999999999998776533 36799999999999999999999999999999
Q ss_pred CCCC-------------CCcHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCcHHHHHhc
Q 043342 304 KDNE-------------GQTPLHYAVVCDREAIAQFLVK---QNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 304 ~d~~-------------G~TpLh~A~~~g~~~iv~~Ll~---~Gad~~~~d~~G~TpL~~A~~ 350 (363)
++.. |+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+.
T Consensus 119 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 119 RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHH
Confidence 9987 9999999999999999999999 999999999999999999986
No 73
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.87 E-value=4e-22 Score=178.49 Aligned_cols=176 Identities=21% Similarity=0.248 Sum_probs=149.9
Q ss_pred HhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCc---ccccccccccccCCCCchHHHHHHH
Q 043342 175 QKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMG---PVFSSFAYEEESGNDLKMDAIHAFA 250 (363)
Q Consensus 175 ~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~~~~~~g~t~Lh~Aa 250 (363)
+..+.++++.| ..+..++++.|+..+.+. ...+..+.++++.+...+... .++..........+..|.||||+|+
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence 34567888886 557889999999877553 345677899999887777443 3444444344445566899999999
Q ss_pred HcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHh
Q 043342 251 REGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR-EAIAQFLVK 329 (363)
Q Consensus 251 ~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~-~~iv~~Ll~ 329 (363)
..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++ ..++++|++
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 164 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT 164 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999997776 799999999
Q ss_pred CCCCCCCCCC-CCCcHHHHHhcC
Q 043342 330 QNADIGMKDN-DGNSPCHVCESD 351 (363)
Q Consensus 330 ~Gad~~~~d~-~G~TpL~~A~~~ 351 (363)
+|++++..+. .|.||||+|+..
T Consensus 165 ~~~~~~~~~~~~g~t~L~~A~~~ 187 (240)
T 3eu9_A 165 FNVSVNLGDKYHKNTALHWAVLA 187 (240)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHH
T ss_pred cCCCcchhhccCCCcHHHHHHHc
Confidence 9999999997 999999999865
No 74
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.87 E-value=1.3e-21 Score=167.65 Aligned_cols=114 Identities=35% Similarity=0.506 Sum_probs=108.4
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 043342 238 GNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVV 317 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~ 317 (363)
....+.++||.|++.|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 318 CDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 318 ~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 123 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMF 123 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999876
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.87 E-value=3.7e-22 Score=169.03 Aligned_cols=133 Identities=26% Similarity=0.376 Sum_probs=111.7
Q ss_pred hhHHHHHhcCCCCHHHHHhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHH
Q 043342 169 AKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHA 248 (363)
Q Consensus 169 ak~~aw~~~g~t~l~~A~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~ 248 (363)
+..+..+..|.++++.|..+..++++.|+..+. +.+..+..|.||||+
T Consensus 29 ~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~--------------------------------~~~~~~~~g~t~L~~ 76 (162)
T 1ihb_A 29 VNVNAQNGFGRTALQVMKLGNPEIARRLLLRGA--------------------------------NPDLKDRTGFAVIHD 76 (162)
T ss_dssp CCTTCCCTTSCCHHHHCCSSCHHHHHHHHHTTC--------------------------------CTTCCCTTSCCHHHH
T ss_pred CCccccCccCccHHHHHHcCcHHHHHHHHHcCC--------------------------------CCCCCCCCCCCHHHH
Confidence 344455566677777665566666666665322 223456678999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 043342 249 FAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNAD-VNAKDNEGQTPLHYAVVCDREAIAQFL 327 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad-in~~d~~G~TpLh~A~~~g~~~iv~~L 327 (363)
|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|
T Consensus 77 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 156 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 699999999999999999999999999
Q ss_pred HhCCCC
Q 043342 328 VKQNAD 333 (363)
Q Consensus 328 l~~Gad 333 (363)
+++||+
T Consensus 157 l~~GAd 162 (162)
T 1ihb_A 157 QANGAG 162 (162)
T ss_dssp HHTC--
T ss_pred HHhCCC
Confidence 999986
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=7.9e-22 Score=178.30 Aligned_cols=115 Identities=24% Similarity=0.380 Sum_probs=107.1
Q ss_pred cCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 043342 237 SGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAV 316 (363)
Q Consensus 237 ~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~ 316 (363)
..+..+.|+||.|+..|+.+++++|++.|++++.+|..|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~ 95 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAA 95 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 44567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHH--hcC
Q 043342 317 VCDREAIAQFLVKQNADIGMKD-NDGNSPCHVC--ESD 351 (363)
Q Consensus 317 ~~g~~~iv~~Ll~~Gad~~~~d-~~G~TpL~~A--~~~ 351 (363)
..|+.+++++|+++|++++.++ ..|+||||+| +..
T Consensus 96 ~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~ 133 (229)
T 2vge_A 96 SCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYRE 133 (229)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTST
T ss_pred HcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhc
Confidence 9999999999999999999986 5999999998 544
No 77
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=8.4e-22 Score=152.17 Aligned_cols=93 Identities=38% Similarity=0.605 Sum_probs=89.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 043342 241 LKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR 320 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~ 320 (363)
.|+||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCC
Q 043342 321 EAIAQFLVKQNAD 333 (363)
Q Consensus 321 ~~iv~~Ll~~Gad 333 (363)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999985
No 78
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=7e-23 Score=162.17 Aligned_cols=92 Identities=37% Similarity=0.702 Sum_probs=85.5
Q ss_pred cchHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcC
Q 043342 110 STELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKY 189 (363)
Q Consensus 110 ~~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~y 189 (363)
.++|++.|..|+.+|+.++. +++++++|+||+||||||+|+|+.++|++|++.+++||+||+++++|+.++||+.|
T Consensus 5 ~~~l~~~F~~A~~~vk~l~~----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~~Y 80 (109)
T 2cop_A 5 SSGLAELFEKAAAHLQGLIQ----VASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEY 80 (109)
T ss_dssp CCCSHHHHHHHHHHHTTSTT----TSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHccc----CCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 35588999999999998753 69999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccc
Q 043342 190 IDIVTELYPTWAAGSS 205 (363)
Q Consensus 190 v~~v~~Ll~~~~~~~~ 205 (363)
|++|..|++.|.....
T Consensus 81 I~lv~~l~~~~~~~~~ 96 (109)
T 2cop_A 81 IAVVKKLDPGWNPQIP 96 (109)
T ss_dssp HHHHHHHCTTCCCCCC
T ss_pred HHHHHHHhhhhcccch
Confidence 9999999999876554
No 79
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=7.4e-23 Score=173.26 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=109.5
Q ss_pred HHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHH
Q 043342 173 AWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAR 251 (363)
Q Consensus 173 aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~ 251 (363)
...+.+.++++.| ..+..++++.|+..+.+ .+..+..|.||||+|+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~t~L~~A~- 53 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGAN--------------------------------PNAPNSYGRRPIQVMM- 53 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCC--------------------------------TTCCCSSSCCTTTSSC-
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCC--------------------------------CCCCCCCCCCHHHHHH-
Confidence 4566778888875 45778888888764321 2334567889999986
Q ss_pred cCCHHHHHHHHHcCCCCccCCCCCCh-HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 043342 252 EGDMDNLLKCIENGVSVNLRDSEGRA-PLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQ 330 (363)
Q Consensus 252 ~g~~~~v~~LL~~g~~vn~~d~~g~T-pLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 330 (363)
.|+.+++++|+++|++++.+|..|+| |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 54 ~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ 133 (156)
T 1bi7_B 54 MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA 133 (156)
T ss_dssp TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc
Confidence 89999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHH
Q 043342 331 NADIGMKDNDGNSPCHVC 348 (363)
Q Consensus 331 Gad~~~~d~~G~TpL~~A 348 (363)
|++++.+|..|.||.+-+
T Consensus 134 ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 134 AGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp C-----------------
T ss_pred CCCCCccCcCcCcccccC
Confidence 999999999999998743
No 80
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.87 E-value=2.1e-22 Score=186.84 Aligned_cols=161 Identities=17% Similarity=0.226 Sum_probs=138.3
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCC-----CCCc--ccccccccccccCCCCc
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSK-----APMG--PVFSSFAYEEESGNDLK 242 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~-----~~~~--~ll~~~~~~~~~~~~~g 242 (363)
.+..+..|.||++.| ..+..++++.|+..+.......+..|.++++.+... +.+. ..+...+......+..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 556678899999986 557899999999988766677888999999977732 2111 22222334455667789
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCH
Q 043342 243 MDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVS-KNADVNAKDNEGQTPLHYAVVCDRE 321 (363)
Q Consensus 243 ~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~-~gadin~~d~~G~TpLh~A~~~g~~ 321 (363)
.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQS 263 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCH
Confidence 999999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHhCC
Q 043342 322 AIAQFLVKQN 331 (363)
Q Consensus 322 ~iv~~Ll~~G 331 (363)
+++++|++++
T Consensus 264 ~iv~~Ll~~~ 273 (276)
T 4hbd_A 264 EIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcc
Confidence 9999999864
No 81
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.86 E-value=3.1e-22 Score=173.01 Aligned_cols=140 Identities=21% Similarity=0.185 Sum_probs=119.8
Q ss_pred hHHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHH
Q 043342 170 KWQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHA 248 (363)
Q Consensus 170 k~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~ 248 (363)
..+..+..|.++++.| ..+..++++.|+..+. +.+..+..|.||||+
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--------------------------------~~~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 31 DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA--------------------------------RINVMNRGDDTPLHL 78 (179)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC--------------------------------CTTCCCTTCCCHHHH
T ss_pred cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCC--------------------------------CCCCcCCCCCCHHHH
Confidence 3445566677777765 3456677777765322 223455678999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 043342 249 FAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLV 328 (363)
Q Consensus 249 Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll 328 (363)
|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCC
Q 043342 329 KQNADIGMKDNDG 341 (363)
Q Consensus 329 ~~Gad~~~~d~~G 341 (363)
++|++++..+..+
T Consensus 159 ~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 159 KMGQNLNRIPYKD 171 (179)
T ss_dssp HTTCCCSCBCCCC
T ss_pred HhhcCcccCCccc
Confidence 9999999877654
No 82
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.86 E-value=9.7e-22 Score=186.60 Aligned_cols=114 Identities=28% Similarity=0.340 Sum_probs=90.2
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHH-cCCCCccCCCCCChHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCcHH
Q 043342 238 GNDLKMDAIHAFAREGDMDNLLKCIE-NGVSVNLRDSEGRAPLHWAVDRGH----LNISELLVSKNADVNAKDNEGQTPL 312 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g~~~~v~~LL~-~g~~vn~~d~~g~TpLh~A~~~g~----~~iv~~Ll~~gadin~~d~~G~TpL 312 (363)
.+..|.||||+|+..|+.+++++||+ .|+++|.+|..|.|+||+++..+. ..++++|+++|+++|.+|..|+|||
T Consensus 164 ~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L 243 (337)
T 4g8k_A 164 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL 243 (337)
T ss_dssp CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHH
T ss_pred ccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 45567888888888888888888885 478888888888888887765443 3577888888888888888888888
Q ss_pred HHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHhcC
Q 043342 313 HYAVVCDREAIAQFLVKQ-NADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 313 h~A~~~g~~~iv~~Ll~~-Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+|+..|+.+++++|+.. |++++.+|.+|+||||+|+..
T Consensus 244 ~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 244 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 283 (337)
T ss_dssp HHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHc
Confidence 888888888888888864 788888888888888888765
No 83
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.86 E-value=1.1e-22 Score=159.78 Aligned_cols=87 Identities=29% Similarity=0.503 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCccc
Q 043342 113 LDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDI 192 (363)
Q Consensus 113 l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~~ 192 (363)
+++.|+.|+.+|++++.++..+++++++|+||+||||||+|+|+.++|++|++.+++||+||+++++|+.++||+.||++
T Consensus 4 ~~~~F~~A~~~vk~l~~~g~~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI~~ 83 (106)
T 3fp5_A 4 SKAKFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYVEK 83 (106)
T ss_dssp CHHHHHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHHHH
Confidence 58999999999999987776789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 043342 193 VTELYPT 199 (363)
Q Consensus 193 v~~Ll~~ 199 (363)
+..|++.
T Consensus 84 v~~l~~~ 90 (106)
T 3fp5_A 84 LLEILKK 90 (106)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 9999874
No 84
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.86 E-value=1.1e-22 Score=187.34 Aligned_cols=172 Identities=13% Similarity=0.157 Sum_probs=131.5
Q ss_pred HhcCCCCHHHHHh----cCccccccccccccccc----------cccCCCCcchhhhhcCCCCCc--ccccccccccccC
Q 043342 175 QKLGAMPPEEAMQ----KYIDIVTELYPTWAAGS----------SLKSKRGQEDAASTDSKAPMG--PVFSSFAYEEESG 238 (363)
Q Consensus 175 ~~~g~t~l~~A~~----~yv~~v~~Ll~~~~~~~----------~~~~~~g~~~~~~a~~~~~~~--~ll~~~~~~~~~~ 238 (363)
+..|.||++.|.. +..++++.|+..+.... ...+..+.|+++.+...+... .++...+.+.+..
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 130 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc
Confidence 4578899999874 78899999998754321 123457899999888777543 2222334444444
Q ss_pred CC--------------CchHHHHHHHHcCCHHHHHHHHH---cCCCCccCCCCCChHHHHHHHcCC---------HHHHH
Q 043342 239 ND--------------LKMDAIHAFAREGDMDNLLKCIE---NGVSVNLRDSEGRAPLHWAVDRGH---------LNISE 292 (363)
Q Consensus 239 ~~--------------~g~t~Lh~Aa~~g~~~~v~~LL~---~g~~vn~~d~~g~TpLh~A~~~g~---------~~iv~ 292 (363)
+. .|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+ .++++
T Consensus 131 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~ 210 (273)
T 2pnn_A 131 ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYN 210 (273)
T ss_dssp BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHH
Confidence 44 69999999999999999999999 999999999999999999999998 89999
Q ss_pred HHHhCCCCCC-------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CCCCCCCCCCcHHH
Q 043342 293 LLVSKNADVN-------AKDNEGQTPLHYAVVCDREAIAQFLVKQNA-DIGMKDNDGNSPCH 346 (363)
Q Consensus 293 ~Ll~~gadin-------~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Ga-d~~~~d~~G~TpL~ 346 (363)
+|+++|+++| .+|..|+||||+|+..|+.+++++|+++|+ ++......+.+|-|
T Consensus 211 ~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 211 EILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred HHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 9999999997 489999999999999999999999999999 89888888877754
No 85
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=3e-22 Score=160.45 Aligned_cols=109 Identities=31% Similarity=0.508 Sum_probs=103.1
Q ss_pred cCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 043342 237 SGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAV 316 (363)
Q Consensus 237 ~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~ 316 (363)
..+..|.|+||+||..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 35778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 043342 317 VCDREAIAQFLVKQNADIGMKDNDGNSPC 345 (363)
Q Consensus 317 ~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL 345 (363)
..++.+++++|+++|++++.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999984
No 86
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.86 E-value=3.2e-21 Score=162.33 Aligned_cols=109 Identities=28% Similarity=0.389 Sum_probs=104.6
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q 043342 242 KMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDRE 321 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~ 321 (363)
..++||.|++.|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 4689999999999999999999999876 588899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 322 AIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 322 ~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+++++|+++|++++.+|..|.||||+|+..
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 110 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEH 110 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 999999999999999999999999999875
No 87
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.86 E-value=4.9e-23 Score=156.77 Aligned_cols=85 Identities=34% Similarity=0.604 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCccc
Q 043342 113 LDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDI 192 (363)
Q Consensus 113 l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~~ 192 (363)
|++.|+.|+++|++++ .+++++++|+||+||||||+|+|+.++|++|++.+++||+||.++++|+.++||+.||++
T Consensus 1 l~~~F~~A~~~v~~l~----~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~~ 76 (86)
T 1st7_A 1 VSQLFEEKAKAVNELP----TKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIAL 76 (86)
T ss_dssp CHHHHHHHHHHHTSCS----SCCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcc----CCcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 4789999999999875 369999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc
Q 043342 193 VTELYPTWA 201 (363)
Q Consensus 193 v~~Ll~~~~ 201 (363)
+..|++.|.
T Consensus 77 v~~l~~~~~ 85 (86)
T 1st7_A 77 VDQLIAKYS 85 (86)
T ss_dssp HHHHHHHHC
T ss_pred HHHHhhhhc
Confidence 999988664
No 88
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.86 E-value=9.6e-23 Score=155.63 Aligned_cols=85 Identities=28% Similarity=0.468 Sum_probs=80.0
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCcc
Q 043342 112 ELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYID 191 (363)
Q Consensus 112 ~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~ 191 (363)
.|++.|+.|+++|++++ .+++++++|+||+||||||+|+|+.++|++|++.+++||+||+++++|+.++||+.||+
T Consensus 3 ~L~~~F~~A~~~vk~l~----~~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi~ 78 (89)
T 3epy_A 3 ALQADFDRAAEDVRKLK----ARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYIS 78 (89)
T ss_dssp HHHHHHHHHHHHGGGCS----SCCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcC----CCcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHHH
Confidence 48999999999999875 36999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc
Q 043342 192 IVTELYPTW 200 (363)
Q Consensus 192 ~v~~Ll~~~ 200 (363)
++..|++.+
T Consensus 79 ~v~~l~~ky 87 (89)
T 3epy_A 79 KAKELIEKY 87 (89)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhhhh
Confidence 999988753
No 89
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.86 E-value=2.9e-21 Score=164.32 Aligned_cols=114 Identities=28% Similarity=0.398 Sum_probs=107.0
Q ss_pred CCCCchHHHHHHHHcCCHHHHHHHHHc-CCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 043342 238 GNDLKMDAIHAFAREGDMDNLLKCIEN-GVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAV 316 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~g~~~~v~~LL~~-g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~ 316 (363)
.+..+.++||.|++.|+.++++.|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 456789999999999999999999985 5678888889999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 317 VCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 317 ~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK 118 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHc
Confidence 99999999999999999999999999999999876
No 90
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.5e-22 Score=159.22 Aligned_cols=91 Identities=33% Similarity=0.559 Sum_probs=83.3
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCc
Q 043342 111 TELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYI 190 (363)
Q Consensus 111 ~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv 190 (363)
.++++.|+.|+++|++++..|..+++++++|+||+||||||+|+|+.++|++|++.+++||+||.++++|+.++||+.|+
T Consensus 6 ~~l~~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI 85 (106)
T 2wh5_A 6 PDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYI 85 (106)
T ss_dssp ---CHHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 44789999999999998877666899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccc
Q 043342 191 DIVTELYPTWA 201 (363)
Q Consensus 191 ~~v~~Ll~~~~ 201 (363)
+++..|++...
T Consensus 86 ~~v~~l~~k~~ 96 (106)
T 2wh5_A 86 TEMKLVAQKVI 96 (106)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999987544
No 91
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=6.5e-22 Score=157.69 Aligned_cols=90 Identities=40% Similarity=0.767 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCcc
Q 043342 112 ELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYID 191 (363)
Q Consensus 112 ~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~ 191 (363)
++++.|+.|+++|+.++. +++++++|+||+||||||+|+|+.++|++|++.+++||+||+++++|+.++||+.||+
T Consensus 15 ~~~~~F~~A~~~vk~l~~----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~~YI~ 90 (116)
T 2cqu_A 15 ASQKDFENSMNQVKLLKK----DPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVD 90 (116)
T ss_dssp CCHHHHHHHHHHHHHCCS----CCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccC----CCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 468999999999998763 5999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccc
Q 043342 192 IVTELYPTWAAGSS 205 (363)
Q Consensus 192 ~v~~Ll~~~~~~~~ 205 (363)
+|..|++.|.....
T Consensus 91 lv~~l~~~~~~~~~ 104 (116)
T 2cqu_A 91 LVSSLSPSLESSSQ 104 (116)
T ss_dssp HHHHHCSCCCCCCC
T ss_pred HHHHHccccccccc
Confidence 99999999886654
No 92
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.85 E-value=3.9e-22 Score=185.82 Aligned_cols=144 Identities=16% Similarity=0.121 Sum_probs=123.6
Q ss_pred ccccCCCCcchhhhhcCCCCCcc---cccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHH
Q 043342 204 SSLKSKRGQEDAASTDSKAPMGP---VFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLH 280 (363)
Q Consensus 204 ~~~~~~~g~~~~~~a~~~~~~~~---ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh 280 (363)
....+..|.++++.+...+.... ++.. +.+.+.. .|.||||+|+..|+.+++++|+++|++++.++..|+||||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 100 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALY 100 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHH
Confidence 45577889999999888775543 2332 3333333 4899999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 281 WAVDRGHLNISELLVSKNADVNAKDNEG-QTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 281 ~A~~~g~~~iv~~Ll~~gadin~~d~~G-~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|+++... ..|.||||+|+..
T Consensus 101 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~ 171 (285)
T 3kea_A 101 YAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKN 171 (285)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHc
Confidence 9999999999999999999999999999 79999999999999999999999887333 2899999999876
No 93
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.85 E-value=1.5e-21 Score=185.20 Aligned_cols=177 Identities=20% Similarity=0.256 Sum_probs=143.1
Q ss_pred hHHHHHhcCCCCHHHH-HhcCcccccccccccccccc---------ccCCCCcchhhhhcCCCCCc---ccccccccccc
Q 043342 170 KWQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSS---------LKSKRGQEDAASTDSKAPMG---PVFSSFAYEEE 236 (363)
Q Consensus 170 k~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~---------~~~~~g~~~~~~a~~~~~~~---~ll~~~~~~~~ 236 (363)
..+..+..|.||++.| ..++.++++.|+..+..... .....|.|+++.+...+... .++...+.+.+
T Consensus 117 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n 196 (337)
T 4g8k_A 117 DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 196 (337)
T ss_dssp CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT
T ss_pred hhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC
Confidence 3445567788999986 45778888888876654321 23345788998887776543 34444566777
Q ss_pred cCCCCchHHHHHHHHcCC----HHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcH
Q 043342 237 SGNDLKMDAIHAFAREGD----MDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSK-NADVNAKDNEGQTP 311 (363)
Q Consensus 237 ~~~~~g~t~Lh~Aa~~g~----~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~-gadin~~d~~G~Tp 311 (363)
..+..|.|+||.++..+. ..++++|+++|+++|.+|..|+||||+|+..|+.++++.|+.. |+++|.+|..|+||
T Consensus 197 ~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~Tp 276 (337)
T 4g8k_A 197 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA 276 (337)
T ss_dssp CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBH
T ss_pred ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCH
Confidence 888889999998887654 3578889999999999999999999999999999999999975 89999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 312 LHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 312 Lh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
||+|+..|+.++|++|+++|++++.+ +|||+|+.+
T Consensus 277 L~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~ 311 (337)
T 4g8k_A 277 LLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRN 311 (337)
T ss_dssp HHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHc
Confidence 99999999999999999999999764 599999876
No 94
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.85 E-value=9.1e-21 Score=159.57 Aligned_cols=109 Identities=23% Similarity=0.336 Sum_probs=104.5
Q ss_pred chHHHHHHHHcCCHHHHHHHHHc-CCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q 043342 242 KMDAIHAFAREGDMDNLLKCIEN-GVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDR 320 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~~~v~~LL~~-g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~ 320 (363)
+.|+||.|+..|+.+.++.|++. +.+++..+..|.||||+ +..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 57999999999999999999998 45899999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 321 EAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 321 ~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
.+++++|+++|++++.+|..|+||||+|+..
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 111 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQE 111 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHh
Confidence 9999999999999999999999999999854
No 95
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.84 E-value=1.5e-21 Score=161.43 Aligned_cols=130 Identities=19% Similarity=0.198 Sum_probs=110.5
Q ss_pred HHHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHH
Q 043342 171 WQAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAF 249 (363)
Q Consensus 171 ~~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A 249 (363)
.+..+..|.++++.| ..+..++++.|+..+. +.+..+..|.||||+|
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--------------------------------~~~~~~~~g~t~L~~A 52 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGA--------------------------------DPNALNRFGRRPIQVM 52 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTC--------------------------------CTTCCCTTCCTTTTTS
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCC--------------------------------CcCCcCCCCCCHHHHH
Confidence 344455666676664 3355666666665322 2344567789999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccCCCC-CChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 043342 250 AREGDMDNLLKCIENGVSVNLRDSE-GRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLV 328 (363)
Q Consensus 250 a~~g~~~~v~~LL~~g~~vn~~d~~-g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll 328 (363)
+. |+.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+
T Consensus 53 ~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll 131 (136)
T 1d9s_A 53 MM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLH 131 (136)
T ss_dssp TT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHH
T ss_pred Hc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99 9999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCC
Q 043342 329 KQNAD 333 (363)
Q Consensus 329 ~~Gad 333 (363)
++|+|
T Consensus 132 ~~Gad 136 (136)
T 1d9s_A 132 AATGD 136 (136)
T ss_dssp HHHCC
T ss_pred HcCCC
Confidence 99986
No 96
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.84 E-value=6.3e-22 Score=152.47 Aligned_cols=84 Identities=36% Similarity=0.744 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCccccc
Q 043342 115 EMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVT 194 (363)
Q Consensus 115 ~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~~v~ 194 (363)
++|+.|+++|+++++ .+++++++|+||+||||||+|+|+.++|++|++.+++||+||.++++|+.++||+.||+++.
T Consensus 12 ~~F~~A~~~vk~l~~---~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv~ 88 (96)
T 2lbb_A 12 DDFDAAVKYVSNTTT---MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLLD 88 (96)
T ss_dssp STHHHHHHHHHHCCC---SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC---CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 479999999998763 36999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 043342 195 ELYPTWA 201 (363)
Q Consensus 195 ~Ll~~~~ 201 (363)
.+++.|.
T Consensus 89 ~l~~~~~ 95 (96)
T 2lbb_A 89 TLAPSWR 95 (96)
T ss_dssp HHCGGGT
T ss_pred HHhchhc
Confidence 9998775
No 97
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.84 E-value=1.1e-20 Score=175.59 Aligned_cols=113 Identities=29% Similarity=0.531 Sum_probs=109.2
Q ss_pred CCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q 043342 239 NDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVC 318 (363)
Q Consensus 239 ~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~ 318 (363)
+..+.|+||.||..|+.+++++|+++|+++|..+..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 44678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 319 DREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 319 g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 117 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEE 149 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSH
T ss_pred CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhc
Confidence 999999999999999999999999999999765
No 98
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.84 E-value=2.6e-21 Score=176.66 Aligned_cols=141 Identities=21% Similarity=0.237 Sum_probs=115.4
Q ss_pred CCcchhhhhcCCCCCcc---cccc---cccccc----cCCCCchHHHHHHH---HcCCHHHHHHHHHcCCC---------
Q 043342 210 RGQEDAASTDSKAPMGP---VFSS---FAYEEE----SGNDLKMDAIHAFA---REGDMDNLLKCIENGVS--------- 267 (363)
Q Consensus 210 ~g~~~~~~a~~~~~~~~---ll~~---~~~~~~----~~~~~g~t~Lh~Aa---~~g~~~~v~~LL~~g~~--------- 267 (363)
.+.++++.+...+.... ++.. ...... ..+..|.||||+|+ +.|+.+++++|++.|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 34556666666554443 3331 112222 23467999999999 77999999999998743
Q ss_pred --CccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHh--
Q 043342 268 --VNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKD--------------NEGQTPLHYAVVCDREAIAQFLVK-- 329 (363)
Q Consensus 268 --vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d--------------~~G~TpLh~A~~~g~~~iv~~Ll~-- 329 (363)
++..|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 44455689999999999999999999999999999998 689999999999999999999999
Q ss_pred -CCCCCCCCCCCCCcHHHHHhc
Q 043342 330 -QNADIGMKDNDGNSPCHVCES 350 (363)
Q Consensus 330 -~Gad~~~~d~~G~TpL~~A~~ 350 (363)
+|++++.+|..|+||||+|+.
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~ 185 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVA 185 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHH
T ss_pred ccCCCCcccCCCCCcHHHHHHH
Confidence 999999999999999999993
No 99
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.84 E-value=5.2e-22 Score=151.19 Aligned_cols=83 Identities=35% Similarity=0.562 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCCCchhhhhhhhhHHHHHhcCCCCHHHHHhcCcccc
Q 043342 114 DEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIV 193 (363)
Q Consensus 114 ~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~p~~~~~~~~ak~~aw~~~g~t~l~~A~~~yv~~v 193 (363)
++.|+.|+++|++++. +++++++|+||+||||||+|+|+.++|++|++.+++||+||.++++|+.++||+.||+++
T Consensus 3 ~~~F~~A~~~vk~l~~----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~v 78 (87)
T 2cb8_A 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKV 78 (87)
T ss_dssp HHHHHHHHHHGGGCSS----CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccC----CcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 6899999999998753 699999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 043342 194 TELYPTW 200 (363)
Q Consensus 194 ~~Ll~~~ 200 (363)
..|++.+
T Consensus 79 ~~l~~~~ 85 (87)
T 2cb8_A 79 EELKKKY 85 (87)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998754
No 100
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.84 E-value=2.5e-22 Score=181.65 Aligned_cols=137 Identities=18% Similarity=0.154 Sum_probs=111.5
Q ss_pred CCcchhhhhcCCCCCcc--cccccccccccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCC
Q 043342 210 RGQEDAASTDSKAPMGP--VFSSFAYEEESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGH 287 (363)
Q Consensus 210 ~g~~~~~~a~~~~~~~~--ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~ 287 (363)
++.++++.++..+.... .+...+.+.+..+..|.||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 44455555555543321 1112233456677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCC-CCCCcHHHHH--HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 043342 288 LNISELLVSKNADVNAKD-NEGQTPLHYA--VVCDREAIAQFLVKQNADIGMKDNDGNSPCH 346 (363)
Q Consensus 288 ~~iv~~Ll~~gadin~~d-~~G~TpLh~A--~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~ 346 (363)
.+++++|++.|++++.++ ..|+||||+| +..|+.+++++|+++|++++.+|..|.||++
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence 999999999999999987 6999999999 9999999999999987776666555555544
No 101
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.83 E-value=3.3e-22 Score=190.05 Aligned_cols=102 Identities=15% Similarity=0.124 Sum_probs=91.7
Q ss_pred cccccccc-CCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCC---HHHHHHHHhCC-CCCCCC
Q 043342 230 SFAYEEES-GNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGH---LNISELLVSKN-ADVNAK 304 (363)
Q Consensus 230 ~~~~~~~~-~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~---~~iv~~Ll~~g-adin~~ 304 (363)
..+.+.+. .+..|.||||+||..|+.+++++||++|++++.+|..|+||||+|+..|+ .++++.|++.+ ++++.+
T Consensus 118 ~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~ 197 (327)
T 1sw6_A 118 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE 197 (327)
T ss_dssp TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEE
T ss_pred hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCC
Confidence 33455566 78899999999999999999999999999999999999999999999998 67788888775 789999
Q ss_pred CCCCCcHHHHHHH----cCCHHHHHHHHhCC
Q 043342 305 DNEGQTPLHYAVV----CDREAIAQFLVKQN 331 (363)
Q Consensus 305 d~~G~TpLh~A~~----~g~~~iv~~Ll~~G 331 (363)
|..|+||||+|+. .|+.+++++|++.+
T Consensus 198 d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 198 DSMNRTILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHccccccHHHHHHHHHHH
Confidence 9999999999999 89999999999873
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=2.2e-20 Score=173.88 Aligned_cols=111 Identities=23% Similarity=0.447 Sum_probs=103.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCc------cCCCCCChHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCcH
Q 043342 241 LKMDAIHAFAREGDMDNLLKCIENGVSVN------LRDSEGRAPLHWAVDR---GHLNISELLVSKNADVNAKDNEGQTP 311 (363)
Q Consensus 241 ~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn------~~d~~g~TpLh~A~~~---g~~~iv~~Ll~~gadin~~d~~G~Tp 311 (363)
...++|+.|+..|+.+.++.++..|++++ ..+..|+||||+|+.. |+.+++++|+++|+++|.+|..|+||
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~Tp 208 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCH
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCH
Confidence 34679999999999999999999998854 4478899999999999 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 312 LHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 312 Lh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 248 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRL 248 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999999999865
No 103
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=4e-20 Score=149.07 Aligned_cols=124 Identities=33% Similarity=0.507 Sum_probs=110.0
Q ss_pred CCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHH
Q 043342 178 GAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMD 256 (363)
Q Consensus 178 g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~ 256 (363)
|.++++.| ..+..++++.|+..+.. .+..+..|.||||+|+..|+.+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~--------------------------------~~~~~~~g~t~L~~A~~~~~~~ 49 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD--------------------------------VNAKDKNGRTPLHLAARNGHLE 49 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCC--------------------------------TTCCCTTSCCHHHHHHHHTCHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCC--------------------------------CCCcCCCCCcHHHHHHHcCcHH
Confidence 67788875 45677888888764321 1234566889999999999999
Q ss_pred HHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 043342 257 NLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNAD 333 (363)
Q Consensus 257 ~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad 333 (363)
++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 50 ~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 50 VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=6.4e-20 Score=177.46 Aligned_cols=114 Identities=24% Similarity=0.419 Sum_probs=107.9
Q ss_pred CCCCchHHHHHHHHc-CCHHHHHHHHHcCCCCccCC--CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 238 GNDLKMDAIHAFARE-GDMDNLLKCIENGVSVNLRD--SEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHY 314 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~-g~~~~v~~LL~~g~~vn~~d--~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~ 314 (363)
....+.|+||.|+.. |+.++++.|++.|+++|..+ ..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHH 274 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 344567999999999 99999999999999999988 789999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 315 AVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 315 A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+..|+.+++++|+++|++++.+|.+|.||||+|+..
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHC
Confidence 9999999999999999999999999999999999866
No 105
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.82 E-value=1.4e-20 Score=170.60 Aligned_cols=111 Identities=23% Similarity=0.259 Sum_probs=75.5
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q 043342 240 DLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCD 319 (363)
Q Consensus 240 ~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g 319 (363)
..|.||||.|++.|+.+.++.|+++|++++.. ..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 45899999999999999999999999999864 67899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 320 REAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 320 ~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASC 113 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 99999999999999999999999999999865
No 106
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.82 E-value=3.6e-20 Score=153.00 Aligned_cols=124 Identities=29% Similarity=0.327 Sum_probs=108.2
Q ss_pred hcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCC
Q 043342 176 KLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGD 254 (363)
Q Consensus 176 ~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~ 254 (363)
..+.++++.| ..+..++++.|+..+.+ .+..+..|.||||+|+..|+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~t~L~~A~~~~~ 59 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGAD--------------------------------VNAKDEYGLTPLYLATAHGH 59 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCC--------------------------------TTCCCTTSCCHHHHHHHHTC
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCC--------------------------------CCCcCCCCCCHHHHHHHcCC
Confidence 3356777775 55777888888764321 23345678999999999999
Q ss_pred HHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 043342 255 MDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQN 331 (363)
Q Consensus 255 ~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G 331 (363)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 60 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 60 LEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999886
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.81 E-value=1.6e-19 Score=169.98 Aligned_cols=110 Identities=20% Similarity=0.377 Sum_probs=93.3
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcc------CCCCCChHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 043342 242 KMDAIHAFAREGDMDNLLKCIENGVSVNL------RDSEGRAPLHWAVDR---GHLNISELLVSKNADVNAKDNEGQTPL 312 (363)
Q Consensus 242 g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~------~d~~g~TpLh~A~~~---g~~~iv~~Ll~~gadin~~d~~G~TpL 312 (363)
..++||.|+..|+.+.++.|+..|++++. .+..|+||||+|+.. ++.+++++|+++|+++|.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 45778888888888888888888888877 577888888888886 788888888888888888888888888
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 313 HYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 313 h~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~ 269 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKK 269 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 888888888888888888888888888888888888753
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=1.3e-19 Score=181.85 Aligned_cols=109 Identities=20% Similarity=0.386 Sum_probs=89.2
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCccC------CCCCChHHHHHHH---cCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 043342 243 MDAIHAFAREGDMDNLLKCIENGVSVNLR------DSEGRAPLHWAVD---RGHLNISELLVSKNADVNAKDNEGQTPLH 313 (363)
Q Consensus 243 ~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~------d~~g~TpLh~A~~---~g~~~iv~~Ll~~gadin~~d~~G~TpLh 313 (363)
.+.||.|+..|+.+.++.||+.|+++|.. +..|.||||+||. .|+.+++++|+++|+++|.+|..|+||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 46788888888888888888888887766 6778888888866 77888888888888888888888888888
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 314 YAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 314 ~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 250 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKK 250 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 88888888888888888888888888888888888755
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.81 E-value=2.4e-20 Score=175.59 Aligned_cols=108 Identities=20% Similarity=0.209 Sum_probs=99.1
Q ss_pred CCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 238 GNDLKMDAIHAFARE---GDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHY 314 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~---g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~ 314 (363)
.+..|.||||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 265 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 467899999999997 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 315 AVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 315 A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
|+..|+.+++++|+++|++ .|.||||+|+..
T Consensus 266 A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~ 296 (301)
T 2b0o_E 266 ARKKHHKECEELLEQAQAG------TFAFPLHVDYSW 296 (301)
T ss_dssp HHHHTCHHHHHHHHHHHHH------TTSSCCC-----
T ss_pred HHHcCCHHHHHHHHHhcCC------CCCChhHHHHhc
Confidence 9999999999999999986 589999999753
No 110
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.79 E-value=1.2e-20 Score=165.44 Aligned_cols=157 Identities=11% Similarity=0.075 Sum_probs=123.1
Q ss_pred CCHHH-HHhcCccccccccccccccccccCCCCcchhhhhcCCCC------CcccccccccccccCCCCchHHHHHHHHc
Q 043342 180 MPPEE-AMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAP------MGPVFSSFAYEEESGNDLKMDAIHAFARE 252 (363)
Q Consensus 180 t~l~~-A~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~------~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~ 252 (363)
++++. |..+.++.++.++.... .......|.|++|.+...+. +..++...+.+.+..+..|+||||+|+..
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~ 85 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG 85 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 34454 45566677777665432 11122457788887777663 22334445666777889999999999999
Q ss_pred CC------HHHHHHHHHcCCCCccCCCCCC-hHHHHHHHcC-----CHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcC
Q 043342 253 GD------MDNLLKCIENGVSVNLRDSEGR-APLHWAVDRG-----HLNISELLVS-KNADVNAKDNEGQTPLHYAVVCD 319 (363)
Q Consensus 253 g~------~~~v~~LL~~g~~vn~~d~~g~-TpLh~A~~~g-----~~~iv~~Ll~-~gadin~~d~~G~TpLh~A~~~g 319 (363)
|+ .+++++|+++|+++|.+|..|+ ||||+|+..+ +.+++++|++ +|+++|.+|..|+||||+|+..|
T Consensus 86 ~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 86 GGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ 165 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTT
T ss_pred CCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcC
Confidence 87 6889999999999999999999 9999999854 4569999999 99999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCC
Q 043342 320 REAIAQFLVKQNADIGMKD 338 (363)
Q Consensus 320 ~~~iv~~Ll~~Gad~~~~d 338 (363)
+.++|++|+++....+.++
T Consensus 166 ~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 166 KPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp CHHHHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHHHHHhccc
Confidence 9999999998766665554
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.78 E-value=1.9e-19 Score=167.45 Aligned_cols=96 Identities=19% Similarity=0.307 Sum_probs=92.6
Q ss_pred CCCCchHHHHHHHHc---CCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 238 GNDLKMDAIHAFARE---GDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHY 314 (363)
Q Consensus 238 ~~~~g~t~Lh~Aa~~---g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~ 314 (363)
.+..|.||||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 165 ~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 244 (278)
T 1dcq_A 165 GHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244 (278)
T ss_dssp CSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH
Confidence 456789999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCC
Q 043342 315 AVVCDREAIAQFLVKQNAD 333 (363)
Q Consensus 315 A~~~g~~~iv~~Ll~~Gad 333 (363)
|+..|+.+++++|+++|++
T Consensus 245 A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 245 AKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHTTCHHHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999885
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=4.7e-19 Score=177.89 Aligned_cols=140 Identities=15% Similarity=0.114 Sum_probs=107.5
Q ss_pred HHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHH---cCCHHH
Q 043342 182 PEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAR---EGDMDN 257 (363)
Q Consensus 182 l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~---~g~~~~ 257 (363)
++.| ..+.++.++.|+..+.+.... ......+..|.||||+||. .|+.++
T Consensus 136 L~~A~~~g~~~~v~~ll~~g~~~n~~--------------------------~~~~~~~~~g~t~Lh~A~~~a~~g~~~~ 189 (497)
T 3lvq_E 136 LWTAICNRDLLSVLEAFANGQDFGQP--------------------------LPGPDAQAPEELVLHLAVKVANQASLPL 189 (497)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSSC--------------------------BCCSSSCCSCBCHHHHHHHTCCTTTHHH
T ss_pred HHHHHhccCHHHHHHHHhhcccccCC--------------------------CCCcccccccchHHHHHHHhcccccHHH
Confidence 4554 557788888888755432210 0012236678999999977 899999
Q ss_pred HHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q 043342 258 LLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMK 337 (363)
Q Consensus 258 v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~ 337 (363)
+++||++|+++|.+|..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 190 v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 190 VDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred CCCCCcHHHH
Q 043342 338 DNDGNSPCHV 347 (363)
Q Consensus 338 d~~G~TpL~~ 347 (363)
.....+++.+
T Consensus 270 ~~h~~~~~~~ 279 (497)
T 3lvq_E 270 PLHVDYSWVI 279 (497)
T ss_dssp ----------
T ss_pred cceeeccccC
Confidence 4444443333
No 113
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=6e-20 Score=164.03 Aligned_cols=139 Identities=15% Similarity=0.134 Sum_probs=108.8
Q ss_pred HHHHhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHH
Q 043342 172 QAWQKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFA 250 (363)
Q Consensus 172 ~aw~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa 250 (363)
+..+..|.++++.| ..+..++++.|+..+.+ .+..+..|.||||+||
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--------------------------------~~~~~~~g~t~L~~A~ 114 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVG--------------------------------VNGLDKAGSTALYWAC 114 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC--------------------------------TTCCCTTSCCHHHHHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCC--------------------------------ccccCCCCCCHHHHHH
Confidence 45567789999985 55788999998864331 2334567899999999
Q ss_pred HcCCHHHHHHHHHc-CCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 043342 251 REGDMDNLLKCIEN-GVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVK 329 (363)
Q Consensus 251 ~~g~~~~v~~LL~~-g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 329 (363)
..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.++++.|++
T Consensus 115 ~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 115 HGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp HTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----
T ss_pred HcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhc
Confidence 99999999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 043342 330 QNADIGMKDNDGN 342 (363)
Q Consensus 330 ~Gad~~~~d~~G~ 342 (363)
+|+..+.+|.+|+
T Consensus 195 ~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 195 TDAVRTLSNAEDY 207 (222)
T ss_dssp -------------
T ss_pred cchhhhccchhhh
Confidence 9999988877654
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=2.9e-18 Score=136.65 Aligned_cols=93 Identities=30% Similarity=0.443 Sum_probs=85.8
Q ss_pred cccCCCCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 235 EESGNDLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHY 314 (363)
Q Consensus 235 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~ 314 (363)
....+..|.|+||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHH
Q 043342 315 AVVCDREAIAQFL 327 (363)
Q Consensus 315 A~~~g~~~iv~~L 327 (363)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999999987
No 115
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=1.4e-18 Score=133.95 Aligned_cols=78 Identities=41% Similarity=0.742 Sum_probs=74.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHhcC
Q 043342 274 EGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 274 ~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 351 (363)
+|+||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999999866
No 116
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.75 E-value=2.8e-19 Score=147.54 Aligned_cols=126 Identities=21% Similarity=0.245 Sum_probs=103.3
Q ss_pred HhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcC
Q 043342 175 QKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREG 253 (363)
Q Consensus 175 ~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g 253 (363)
+..|.++++.| ..+..++++.|+..+. +.+..+..|.||||+|+..|
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~--------------------------------~~~~~~~~g~t~L~~A~~~~ 54 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGS--------------------------------DPNVKDHAGWTPLHEACNHG 54 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTC--------------------------------CSCCCCTTSCCHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCC--------------------------------CCCcCCCCCCCHHHHHHHcC
Confidence 34566777764 4456666666665322 22345667899999999999
Q ss_pred CHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 043342 254 DMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNA 332 (363)
Q Consensus 254 ~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Ga 332 (363)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|.+.+.
T Consensus 55 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 55 HLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999988899888877654
No 117
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.73 E-value=5.1e-18 Score=164.11 Aligned_cols=138 Identities=20% Similarity=0.261 Sum_probs=102.2
Q ss_pred cchhhhhcCC-CCCccc--ccccccccccCC--CCchHHHHHHHHcCCHHHHHHHHHcCCCCccCCCCCChHHHHHHHcC
Q 043342 212 QEDAASTDSK-APMGPV--FSSFAYEEESGN--DLKMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRG 286 (363)
Q Consensus 212 ~~~~~~a~~~-~~~~~l--l~~~~~~~~~~~--~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g 286 (363)
.++++.++.. +.+..+ +.....+.+..+ ..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g 279 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 3456666655 543322 122333444455 78899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC---CCCCCCCCCCCcHHHHHh
Q 043342 287 HLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQN---ADIGMKDNDGNSPCHVCE 349 (363)
Q Consensus 287 ~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G---ad~~~~d~~G~TpL~~A~ 349 (363)
+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+.++ ++....+..+.|+++++.
T Consensus 280 ~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 280 HTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred cHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999875 445566778899988754
No 118
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.72 E-value=2.9e-18 Score=138.86 Aligned_cols=111 Identities=23% Similarity=0.196 Sum_probs=92.8
Q ss_pred HhcCCCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcC
Q 043342 175 QKLGAMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREG 253 (363)
Q Consensus 175 ~~~g~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g 253 (363)
...+.++++.| ..+..++++.|+..+. +.+..+..|.||||+|+..|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~--------------------------------~~~~~~~~g~t~L~~A~~~~ 51 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGE--------------------------------DVNRTLEGGRKPLHYAADCG 51 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTC--------------------------------CTTSCCTTSSCHHHHHHHTT
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCC--------------------------------CcCccCCCCCcHHHHHHHcC
Confidence 45566777765 4466777777775332 12344667899999999999
Q ss_pred CHHHHHHHHHcCCCCccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 043342 254 DMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVV 317 (363)
Q Consensus 254 ~~~~v~~LL~~g~~vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~ 317 (363)
+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|..
T Consensus 52 ~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 52 QLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred CHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999999999943
No 119
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.72 E-value=8e-18 Score=146.01 Aligned_cols=129 Identities=19% Similarity=0.147 Sum_probs=106.0
Q ss_pred HHHhcCCCCHHHHH-hcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHH
Q 043342 173 AWQKLGAMPPEEAM-QKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAR 251 (363)
Q Consensus 173 aw~~~g~t~l~~A~-~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~ 251 (363)
..+..|.++++.|. .+..++++.|+. +. +.+..+..|.||||+|+.
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--------------------------------~~~~~d~~g~t~L~~A~~ 85 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLE-DR--------------------------------DVDAVDENGRTALLFVAG 85 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTT-TS--------------------------------CTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-cC--------------------------------CCCCcCCCCCCHHHHHHH
Confidence 34456778888754 466777777775 21 123456678999999999
Q ss_pred cCCHHHHHHHHHcCCCCccCC-CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 043342 252 EGDMDNLLKCIENGVSVNLRD-SEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQ 330 (363)
Q Consensus 252 ~g~~~~v~~LL~~g~~vn~~d-~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 330 (363)
.|+.+++++|+++|+++|.++ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.
T Consensus 86 ~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~--------- 156 (183)
T 3deo_A 86 LGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT--------- 156 (183)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT---------
T ss_pred cCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC---------
Confidence 999999999999999999998 8899999999999999999999999999999999999999999875322
Q ss_pred CCCCCCCCCCCCcHHHHHhcC
Q 043342 331 NADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 331 Gad~~~~d~~G~TpL~~A~~~ 351 (363)
..+.+||+++++.
T Consensus 157 --------~~~~~~l~~a~~~ 169 (183)
T 3deo_A 157 --------TPKGNPMQFGRRI 169 (183)
T ss_dssp --------CCCCSHHHHHHHH
T ss_pred --------cccccHHHHHHHc
Confidence 3457788777654
No 120
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.71 E-value=9.8e-18 Score=152.53 Aligned_cols=123 Identities=22% Similarity=0.181 Sum_probs=101.9
Q ss_pred HhcCCCCHHHHHh-cCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcC
Q 043342 175 QKLGAMPPEEAMQ-KYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREG 253 (363)
Q Consensus 175 ~~~g~t~l~~A~~-~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g 253 (363)
+..|.|+++.|.. +..++++.|+. +. +.+..+..|.||||+||..|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--------------------------------~~~~~d~~g~t~L~~A~~~g 88 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DR--------------------------------DVDAVDENGRTALLFVAGLG 88 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TC--------------------------------CTTCBCTTSCBHHHHHHHHT
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CC--------------------------------CCCCcCCCCCCHHHHHHHCC
Confidence 4567788887644 67777777775 21 12344567899999999999
Q ss_pred CHHHHHHHHHcCCCCccCC-CCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH---------------
Q 043342 254 DMDNLLKCIENGVSVNLRD-SEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVV--------------- 317 (363)
Q Consensus 254 ~~~~v~~LL~~g~~vn~~d-~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~--------------- 317 (363)
+.+++++|+++|+++|.++ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 89 ~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~ 168 (244)
T 3ui2_A 89 SDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 168 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHH
T ss_pred CHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHH
Confidence 9999999999999999998 789999999999999999999999999999999999999999984
Q ss_pred -cCCHHHHHHHHhC
Q 043342 318 -CDREAIAQFLVKQ 330 (363)
Q Consensus 318 -~g~~~iv~~Ll~~ 330 (363)
.|+.+++++|+++
T Consensus 169 ~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 169 RIGLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HcChHHHHHHHHHh
Confidence 4555666666654
No 121
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=4.8e-17 Score=129.48 Aligned_cols=84 Identities=26% Similarity=0.351 Sum_probs=77.0
Q ss_pred CccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 043342 268 VNLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHV 347 (363)
Q Consensus 268 vn~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~ 347 (363)
....+..|.|+||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcC
Q 043342 348 CESD 351 (363)
Q Consensus 348 A~~~ 351 (363)
|+..
T Consensus 97 A~~~ 100 (110)
T 2zgd_A 97 SIDN 100 (110)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 9864
No 122
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.66 E-value=9.5e-17 Score=128.14 Aligned_cols=82 Identities=37% Similarity=0.643 Sum_probs=79.3
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHh
Q 043342 270 LRDSEGRAPLHWAVDRGHLNISELLVSKNADVNAKDNEGQTPLHYAVVCDREAIAQFLVKQNADIGMKDNDGNSPCHVCE 349 (363)
Q Consensus 270 ~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~~~~d~~G~TpL~~A~ 349 (363)
.+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cC
Q 043342 350 SD 351 (363)
Q Consensus 350 ~~ 351 (363)
..
T Consensus 84 ~~ 85 (115)
T 2l6b_A 84 KN 85 (115)
T ss_dssp TT
T ss_pred HC
Confidence 76
No 123
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.66 E-value=3.3e-18 Score=165.93 Aligned_cols=136 Identities=12% Similarity=0.037 Sum_probs=107.7
Q ss_pred CCCHHHH-HhcCccccccccccccccccccCCCCcchhhhhcCCCCCcccccccccccccCCCCchHHHHHHHHcCCHHH
Q 043342 179 AMPPEEA-MQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSKAPMGPVFSSFAYEEESGNDLKMDAIHAFAREGDMDN 257 (363)
Q Consensus 179 ~t~l~~A-~~~yv~~v~~Ll~~~~~~~~~~~~~g~~~~~~a~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~ 257 (363)
.|+++.| ..++.++++.|+..+..... ....+..|.||||+||..|+.++
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~-----------------------------~~~~~~~~~tpL~~Aa~~G~~ei 143 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEI-----------------------------VKVIQAENYQAFRLAAENGHLHV 143 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSS-----------------------------CC--CHHHHHHHHHHHHTTCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHH-----------------------------HHHhccCCCCHHHHHHHcCCHHH
Confidence 3788875 56889999999875431100 01123356789999999999999
Q ss_pred HHHHHHcCCCC---ccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCC--CCCCCCcHHHHHH-HcCCHHHHHHHHhCC
Q 043342 258 LLKCIENGVSV---NLRDSEGRAPLHWAVDRGHLNISELLVSKNADVNA--KDNEGQTPLHYAV-VCDREAIAQFLVKQN 331 (363)
Q Consensus 258 v~~LL~~g~~v---n~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gadin~--~d~~G~TpLh~A~-~~g~~~iv~~Ll~~G 331 (363)
+++|+++|+++ +..+.. .||||+|+..|+.+++++|+++|++++. +|..|+||||+|+ ..|+.++|++|+++|
T Consensus 144 v~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 144 LNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred HHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 99999999752 222223 8999999999999999999999999887 8888999999999 999999999999987
Q ss_pred CCCCCCCCCCCcHHHHHhcC
Q 043342 332 ADIGMKDNDGNSPCHVCESD 351 (363)
Q Consensus 332 ad~~~~d~~G~TpL~~A~~~ 351 (363)
++ |.||||+|+.+
T Consensus 223 a~-------~~taL~~Aa~~ 235 (376)
T 2aja_A 223 VM-------LAYAEIHEFEY 235 (376)
T ss_dssp HH-------HHHHHHCTTTT
T ss_pred Cc-------cchHHHHHHHC
Confidence 53 89999999876
No 124
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.66 E-value=9e-18 Score=162.84 Aligned_cols=111 Identities=11% Similarity=-0.001 Sum_probs=93.7
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCC---ccCCCCCChHHHHHHHcCCHHHHHHHHhCCCC---CCCCCCCCCcHHH
Q 043342 240 DLKMDAIHAFAREGDMDNLLKCIENGVSV---NLRDSEGRAPLHWAVDRGHLNISELLVSKNAD---VNAKDNEGQTPLH 313 (363)
Q Consensus 240 ~~g~t~Lh~Aa~~g~~~~v~~LL~~g~~v---n~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad---in~~d~~G~TpLh 313 (363)
..+.||||+|++.|+.+++++|++.|+.. +..+..|.||||+|+..|+.+++++|+++|++ .+..+.+ +||||
T Consensus 90 ~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 90 IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHH
T ss_pred CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHH
Confidence 44579999999999999999999998732 23445688999999999999999999999976 2333333 99999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCC--CCCCCCcHHHHHh-cC
Q 043342 314 YAVVCDREAIAQFLVKQNADIGM--KDNDGNSPCHVCE-SD 351 (363)
Q Consensus 314 ~A~~~g~~~iv~~Ll~~Gad~~~--~d~~G~TpL~~A~-~~ 351 (363)
+|+..|+.++|++|+++|++++. +|..|.||||+|+ .+
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~ 209 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 209 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHC
Confidence 99999999999999999999988 8899999999999 65
No 125
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=92.03 E-value=0.24 Score=42.66 Aligned_cols=84 Identities=21% Similarity=0.298 Sum_probs=63.4
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCC--CCchhhhh------------hhhhHHHHHh
Q 043342 111 TELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAP--QPSALKMT------------ARAKWQAWQK 176 (363)
Q Consensus 111 ~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~--~p~~~~~~------------~~ak~~aw~~ 176 (363)
..+.-.|.++..-+.. |....+.++.++|.+|..|+..|+++.. .|+.+... .+..+..|.+
T Consensus 16 ~~~~l~y~Q~~~dil~----g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~ 91 (206)
T 1mix_A 16 VQLNLLYVQARDDILN----GSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKN 91 (206)
T ss_dssp HHHHHHHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC----CccccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHH
Confidence 3345566666665553 4457899999999999999999998753 34443322 4566789999
Q ss_pred cCCCCHHHHHhcCccccccccc
Q 043342 177 LGAMPPEEAMQKYIDIVTELYP 198 (363)
Q Consensus 177 ~g~t~l~~A~~~yv~~v~~Ll~ 198 (363)
..+++..+|+..|++++..|--
T Consensus 92 ~~g~s~~~A~~~yL~~~~~l~~ 113 (206)
T 1mix_A 92 CGNMSEIEAKVRYVKLARSLKT 113 (206)
T ss_dssp TTTCCHHHHHHHHHHHHHHSTT
T ss_pred ccCCCHHHHHHHHHHHHHhCcc
Confidence 9999999999999999988744
No 126
>3bo0_B Preprotein translocase SECE subunit; ribosome-SECY complex, protein translocation; 9.60A {Escherichia coli} PDB: 3bo1_B 3kcr_B
Probab=58.12 E-value=6.4 Score=27.11 Aligned_cols=27 Identities=15% Similarity=0.210 Sum_probs=22.9
Q ss_pred chHHHH---HHHHHHHHHHHHHHHHHHHHh
Q 043342 3 DWQPLL---QSILIGLLFSYLVAKLISVVL 29 (363)
Q Consensus 3 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 29 (363)
+|+|+. ++.++|++|..+++-+|..+.
T Consensus 28 ~~~e~~~v~~~t~vv~~~v~~i~~~i~lid 57 (65)
T 3bo0_B 28 TKDEYLAVAKVTALGISLLGIIGYIIHVPA 57 (65)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 689999 999999999998888776654
No 127
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=56.74 E-value=11 Score=22.60 Aligned_cols=19 Identities=37% Similarity=0.574 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 043342 9 QSILIGLLFSYLVAKLISV 27 (363)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (363)
-|+..||++-|.+|.|+|-
T Consensus 15 TSLy~GLLlifvlavlFss 33 (37)
T 3arc_L 15 TSLYLGLLLILVLALLFSS 33 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhh
Confidence 4789999999999999985
No 128
>2ksd_A Aerobic respiration control sensor protein ARCB; methods development, histidine kinase receptor, membrane domain, two-helical hairpin; NMR {Escherichia coli}
Probab=39.94 E-value=5.1 Score=31.06 Aligned_cols=41 Identities=24% Similarity=0.409 Sum_probs=25.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHh-hcccCCeeeccCCC
Q 043342 3 DWQPLLQSILIGLLFSYLVAKLISVVL-SFKEENLSITRSNN 43 (363)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 43 (363)
+|..++-|||+|++-|=.+.--+|+++ -..+-..||++.-+
T Consensus 51 ~~~Di~rsI~Fgli~aP~viYFls~vVe~LE~SR~~Ls~~V~ 92 (115)
T 2ksd_A 51 ESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQ 92 (115)
T ss_dssp SSSSCCSTTTHHHHHHHHHHHHHHHHHHCCCSSCCCCCC---
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 388899999999999944444444444 34555555555544
No 129
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=39.65 E-value=57 Score=27.79 Aligned_cols=84 Identities=21% Similarity=0.286 Sum_probs=58.1
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCC--Cchhh---h--------hh-hhhHHHHHh
Q 043342 111 TELDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQ--PSALK---M--------TA-RAKWQAWQK 176 (363)
Q Consensus 111 ~~l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~--p~~~~---~--------~~-~ak~~aw~~ 176 (363)
..+.--|.++..-+-. |....+.++-++|-+|.-|+..|+++... ++.+. + .. +.-...|.+
T Consensus 27 ~~l~l~ylQ~~~dil~----G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~ 102 (222)
T 4f7g_A 27 VQLNLLYVQARDDILN----GSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKN 102 (222)
T ss_dssp CHHHHHHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhC----CcccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHh
Confidence 3455566666665543 44578899999999999999999986532 11111 1 11 122347888
Q ss_pred cCCCCHHHHHhcCccccccccc
Q 043342 177 LGAMPPEEAMQKYIDIVTELYP 198 (363)
Q Consensus 177 ~g~t~l~~A~~~yv~~v~~Ll~ 198 (363)
..+++..+|+..|++++..|-.
T Consensus 103 ~~g~s~~eA~~~yL~~~~~l~~ 124 (222)
T 4f7g_A 103 CGQMSEIEAKVRYVKLARSLKT 124 (222)
T ss_dssp TTTCCHHHHHHHHHHHHHTSTT
T ss_pred ccCCCHHHHHHHHHHHHhhccc
Confidence 8999999999999999988743
No 130
>3bz1_y Protein YCF12; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 3bz2_y* 3kzi_y* 3prq_y* 3prr_y*
Probab=38.36 E-value=19 Score=22.93 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=22.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCe
Q 043342 3 DWQPLLQSILIGLLFSYLVAKLISVVLSFKEENL 36 (363)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (363)
+|+-++|-..+++|.. ..-++-+.+++|.+||
T Consensus 15 N~evI~QL~~LalIv~--aGPlVI~LLa~R~GNL 46 (46)
T 3bz1_y 15 NFEVIAQLTMIAMIGI--AGPMIIFLLAVRRGNL 46 (46)
T ss_dssp ----CCTHHHHHHHHH--HHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHHH--cccHHhhhHHhhcCCC
Confidence 4999999988888764 5677778888998886
No 131
>2hzd_A Transcriptional enhancer factor TEF-1; DNA-binding, helix-turn-helix, gene regulation; NMR {Homo sapiens}
Probab=38.27 E-value=15 Score=26.67 Aligned_cols=24 Identities=33% Similarity=0.525 Sum_probs=20.9
Q ss_pred CCCccccccchHHHHHHHHHHHHH
Q 043342 102 DDDWEGVESTELDEMFSAATAFVA 125 (363)
Q Consensus 102 ~~d~e~~e~~~l~~~f~~A~~~v~ 125 (363)
|.|.|+.|..+||..|.+|+..+.
T Consensus 2 d~~~e~vW~~~lE~aF~eaL~~yp 25 (82)
T 2hzd_A 2 DNDAEGVWSPDIEQSFQEALSIYP 25 (82)
T ss_dssp CGGGSCCSCHHHHHHHHHHHHHSC
T ss_pred CCCcCCcCCHHHHHHHHHHHHHcC
Confidence 456799999999999999999775
No 132
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=27.30 E-value=76 Score=28.47 Aligned_cols=78 Identities=10% Similarity=0.012 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCC--CCchhh----------hhhhhhHHHHHhcCCCCHHH
Q 043342 117 FSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAP--QPSALK----------MTARAKWQAWQKLGAMPPEE 184 (363)
Q Consensus 117 f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~--~p~~~~----------~~~~ak~~aw~~~g~t~l~~ 184 (363)
|.++..-|-. |....+.++.++|-+|.-|+..|+++.. .+..+. -..+.-...|.+..+++..+
T Consensus 114 ylQ~~~dil~----G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~e 189 (296)
T 3qij_A 114 CLQLRQDIVA----GRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQ 189 (296)
T ss_dssp HHHHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHH
T ss_pred HHHHHHHHHc----CCCCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHH
Confidence 4454444432 4456889999999999999999998631 111111 11122334788889999999
Q ss_pred HHhcCccccccccc
Q 043342 185 AMQKYIDIVTELYP 198 (363)
Q Consensus 185 A~~~yv~~v~~Ll~ 198 (363)
|+..|+++++.|--
T Consensus 190 A~~~yL~~a~~l~~ 203 (296)
T 3qij_A 190 ADLEFLENAKKLSM 203 (296)
T ss_dssp HHHHHHHHHTTSTT
T ss_pred HHHHHHHHHhcccc
Confidence 99999999988643
No 133
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=24.20 E-value=45 Score=20.40 Aligned_cols=19 Identities=5% Similarity=0.242 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 043342 9 QSILIGLLFSYLVAKLISV 27 (363)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (363)
|-++++++|+-|+...-.+
T Consensus 9 ~p~i~lII~~vmaGiIG~I 27 (40)
T 1afo_A 9 EPEITLIIFGVMAGVIGTI 27 (40)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHH
Confidence 4478899999998765443
No 134
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=22.00 E-value=1.3e+02 Score=26.67 Aligned_cols=82 Identities=13% Similarity=0.147 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCC--Cchhhh------h--h-----hhhH-----H
Q 043342 113 LDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQ--PSALKM------T--A-----RAKW-----Q 172 (363)
Q Consensus 113 l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~--p~~~~~------~--~-----~ak~-----~ 172 (363)
..--|.++..-+-. |....+.++.++|-+|.-|+..|+++... ++.+.. . . ...| .
T Consensus 96 ~~l~y~Q~~~dil~----g~~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~ 171 (294)
T 1ef1_A 96 QRLFFLQVKEGILN----DDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQV 171 (294)
T ss_dssp HHHHHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc----CcccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHH
Confidence 34455555554443 44578899999999999999999986432 222210 0 0 1123 3
Q ss_pred HHHhcCCCCHHHHHhcCccccccccc
Q 043342 173 AWQKLGAMPPEEAMQKYIDIVTELYP 198 (363)
Q Consensus 173 aw~~~g~t~l~~A~~~yv~~v~~Ll~ 198 (363)
.|.+..+++..+|+..|++++..+--
T Consensus 172 ~~~~~~g~s~~~A~~~yL~~~~~lp~ 197 (294)
T 1ef1_A 172 WHEEHRGMLREDAVLEYLKIAQDLEM 197 (294)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTTSTT
T ss_pred HHHHccCCCHHHHHHHHHHHHcccCc
Confidence 67888999999999999999987643
No 135
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=20.51 E-value=2.2e+02 Score=25.32 Aligned_cols=82 Identities=12% Similarity=0.055 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCChhhHhHHhhhhhccccCCCCCCC--Cchhhh------------------hhhhhHH
Q 043342 113 LDEMFSAATAFVAASAAASSQKVSNDVQLQLYALYKIATEGPCSAPQ--PSALKM------------------TARAKWQ 172 (363)
Q Consensus 113 l~~~f~~A~~~v~~~~~~~~~~~~~~~~L~lyalykqAt~G~~~~~~--p~~~~~------------------~~~ak~~ 172 (363)
..-.|.++..-+-. |....+.++.++|-+|.-|+..|+++... ++.+.. ..+.-..
T Consensus 116 ~~l~y~Q~~~dil~----g~~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~ 191 (314)
T 1h4r_A 116 QHLFFLQVKKQILD----EKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITA 191 (314)
T ss_dssp HHHHHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC----CCccCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHH
Confidence 34445555554432 44578899999999999999999986432 222110 0112224
Q ss_pred HHHhcCCCCHHHHHhcCccccccccc
Q 043342 173 AWQKLGAMPPEEAMQKYIDIVTELYP 198 (363)
Q Consensus 173 aw~~~g~t~l~~A~~~yv~~v~~Ll~ 198 (363)
.|.+..+++..+|+..|++++..+--
T Consensus 192 ~~~~~~g~s~~eA~~~yL~~~~~lp~ 217 (314)
T 1h4r_A 192 WYAEHRGRARDEAEMEYLKIAQDLEM 217 (314)
T ss_dssp HHHTTTTCCHHHHHHHHHHHHTTSTT
T ss_pred HHHHcCCCCHHHHHHHHHHHHhccCc
Confidence 77888999999999999999988643
Done!