BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043345
DQQNVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYY
LVKNKLQTLFQVCLKSLASS

High Scoring Gene Products

Symbol, full name Information P value
AHP1
AT3G21510
protein from Arabidopsis thaliana 2.6e-24
AHP5
AT1G03430
protein from Arabidopsis thaliana 6.0e-16
AHP2
AT3G29350
protein from Arabidopsis thaliana 1.6e-15
AHP3
AT5G39340
protein from Arabidopsis thaliana 1.1e-14
HP6
histidine phosphotransfer protein 6
protein from Arabidopsis thaliana 6.2e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043345
        (80 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2089900 - symbol:AHP1 "histidine-containing ph...   278  2.6e-24   1
TAIR|locus:2020868 - symbol:AHP5 "histidine-containing ph...   199  6.0e-16   1
TAIR|locus:2093817 - symbol:AHP2 "histidine-containing ph...   195  1.6e-15   1
TAIR|locus:2175643 - symbol:AHP3 "histidine-containing ph...   187  1.1e-14   1
TAIR|locus:2016339 - symbol:HP6 "histidine phosphotransfe...   180  6.2e-14   1


>TAIR|locus:2089900 [details] [associations]
            symbol:AHP1 "histidine-containing phosphotransmitter 1"
            species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;IMP] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0009927 "histidine
            phosphotransfer kinase activity" evidence=ISS;IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0043424 "protein histidine
            kinase binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA;NAS] [GO:0009736 "cytokinin mediated signaling
            pathway" evidence=RCA;IMP;TAS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0080036 "regulation of cytokinin mediated signaling pathway"
            evidence=IGI] [GO:0009553 "embryo sac development" evidence=IGI]
            [GO:0016049 "cell growth" evidence=IGI] [GO:0051301 "cell division"
            evidence=IGI] [GO:0000041 "transition metal ion transport"
            evidence=RCA] [GO:0010029 "regulation of seed germination"
            evidence=RCA] [GO:0015698 "inorganic anion transport" evidence=RCA]
            [GO:0031537 "regulation of anthocyanin metabolic process"
            evidence=RCA] [GO:0048831 "regulation of shoot system development"
            evidence=RCA] InterPro:IPR008207 Pfam:PF01627 PROSITE:PS50894
            SMART:SM00073 GO:GO:0005829 GO:GO:0005634 GO:GO:0005737
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006950 EMBL:AB019232
            GO:GO:0051301 GO:GO:0016049 GO:GO:0009736 GO:GO:0009927
            GO:GO:0000160 EMBL:AB012570 EMBL:AB015141 EMBL:AF370265
            EMBL:AY063082 IPI:IPI00547967 RefSeq:NP_188788.1 UniGene:At.24157
            ProteinModelPortal:Q9ZNV9 SMR:Q9ZNV9 IntAct:Q9ZNV9 STRING:Q9ZNV9
            PaxDb:Q9ZNV9 PRIDE:Q9ZNV9 DNASU:821705 EnsemblPlants:AT3G21510.1
            GeneID:821705 KEGG:ath:AT3G21510 GeneFarm:3812 TAIR:At3g21510
            eggNOG:NOG275839 HOGENOM:HOG000272680 InParanoid:Q9ZNV9 KO:K14490
            OMA:IGAQRVK PhylomeDB:Q9ZNV9 ProtClustDB:CLSN2915741
            Genevestigator:Q9ZNV9 GermOnline:AT3G21510 GO:GO:0009553
            GO:GO:0080036 Gene3D:1.20.120.160 SUPFAM:SSF47226 Uniprot:Q9ZNV9
        Length = 154

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 53/79 (67%), Positives = 64/79 (81%)

Query:     1 DQQNVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYY 60
             DQQ VDF KV  HVHQLKGSSSSIGAQRV N C  FRSFCE++N+E C + LQ +KQEYY
Sbjct:    65 DQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYY 124

Query:    61 LVKNKLQTLFQVCLKSLAS 79
             LVKN+L+TLF++  + +AS
Sbjct:   125 LVKNRLETLFKLEQQIVAS 143


>TAIR|locus:2020868 [details] [associations]
            symbol:AHP5 "histidine-containing phosphotransfer factor
            5" species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;TAS] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0009927 "histidine
            phosphotransfer kinase activity" evidence=ISS;IDA] [GO:0043424
            "protein histidine kinase binding" evidence=IPI] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0009736 "cytokinin mediated signaling pathway"
            evidence=RCA;IMP] [GO:0080036 "regulation of cytokinin mediated
            signaling pathway" evidence=IGI] [GO:0000165 "MAPK cascade"
            evidence=RCA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0009617 "response to bacterium"
            evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
            acid mediated signaling pathway" evidence=RCA] [GO:0009863
            "salicylic acid mediated signaling pathway" evidence=RCA]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=RCA] [GO:0010029 "regulation of seed germination"
            evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0031348
            "negative regulation of defense response" evidence=RCA] [GO:0031537
            "regulation of anthocyanin metabolic process" evidence=RCA]
            [GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
            [GO:0043069 "negative regulation of programmed cell death"
            evidence=RCA] [GO:0048831 "regulation of shoot system development"
            evidence=RCA] [GO:0051707 "response to other organism"
            evidence=RCA] InterPro:IPR008207 Pfam:PF01627 PROSITE:PS50894
            SMART:SM00073 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
            GO:GO:0005634 GO:GO:0005737 EMBL:AC002560 GO:GO:0009736
            GO:GO:0009927 GO:GO:0000160 eggNOG:NOG275839 HOGENOM:HOG000272680
            KO:K14490 GO:GO:0080036 Gene3D:1.20.120.160 SUPFAM:SSF47226
            ProtClustDB:CLSN2684116 EMBL:AB041767 EMBL:AY088228 IPI:IPI00531844
            RefSeq:NP_563684.1 UniGene:At.1207 ProteinModelPortal:Q8L9T7
            SMR:Q8L9T7 IntAct:Q8L9T7 STRING:Q8L9T7 EnsemblPlants:AT1G03430.1
            GeneID:839506 KEGG:ath:AT1G03430 GeneFarm:3822 TAIR:At1g03430
            InParanoid:Q8L9T7 OMA:CISFKEC PhylomeDB:Q8L9T7
            Genevestigator:Q8L9T7 GermOnline:AT1G03430 Uniprot:Q8L9T7
        Length = 157

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 38/69 (55%), Positives = 50/69 (72%)

Query:     4 NVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYYLVK 63
             NVDF +V   VHQLKGSSSS+GA+RV NVC +F+  C+ +N EGC + LQ +  EY ++K
Sbjct:    72 NVDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDYEYKMLK 131

Query:    64 NKLQTLFQV 72
              KLQ LF +
Sbjct:   132 TKLQDLFNL 140


>TAIR|locus:2093817 [details] [associations]
            symbol:AHP2 "histidine-containing phosphotransmitter 2"
            species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;IDA] [GO:0004871 "signal
            transducer activity" evidence=IEA;ISS] [GO:0007165 "signal
            transduction" evidence=ISS] [GO:0009927 "histidine phosphotransfer
            kinase activity" evidence=ISS;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0043424 "protein histidine kinase binding"
            evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0009736
            "cytokinin mediated signaling pathway" evidence=RCA;IMP;TAS]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0080036 "regulation of
            cytokinin mediated signaling pathway" evidence=IGI] [GO:0005829
            "cytosol" evidence=IDA] [GO:0010029 "regulation of seed
            germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
            metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
            system development" evidence=RCA] InterPro:IPR008207 Pfam:PF01627
            PROSITE:PS50894 SMART:SM00073 GO:GO:0005829 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006950 GO:GO:0009736
            GO:GO:0009927 GO:GO:0000160 HOGENOM:HOG000272680 KO:K14490
            GO:GO:0080036 Gene3D:1.20.120.160 SUPFAM:SSF47226 EMBL:AB012568
            EMBL:AB015142 EMBL:AP001309 EMBL:AY064148 EMBL:AY097403
            IPI:IPI00543858 IPI:IPI00548739 RefSeq:NP_189581.1
            RefSeq:NP_850649.1 UniGene:At.22337 ProteinModelPortal:Q9ZNV8
            SMR:Q9ZNV8 IntAct:Q9ZNV8 STRING:Q9ZNV8 PaxDb:Q9ZNV8 PRIDE:Q9ZNV8
            DNASU:822593 EnsemblPlants:AT3G29350.1 GeneID:822593
            KEGG:ath:AT3G29350 GeneFarm:3816 TAIR:At3g29350 eggNOG:NOG259404
            InParanoid:Q9ZNV8 OMA:CEAKNYE PhylomeDB:Q9ZNV8
            ProtClustDB:CLSN2684116 Genevestigator:Q9ZNV8 GermOnline:AT3G29350
            Uniprot:Q9ZNV8
        Length = 156

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 36/68 (52%), Positives = 49/68 (72%)

Query:     5 VDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYYLVKN 64
             VDF++VG  VHQLKGSSSS+GA+RV  +C +F+  CE +N EGC + LQ +  EY  +K 
Sbjct:    72 VDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYKALKT 131

Query:    65 KLQTLFQV 72
             KLQ +F +
Sbjct:   132 KLQDMFNL 139


>TAIR|locus:2175643 [details] [associations]
            symbol:AHP3 "histidine-containing phosphotransmitter 3"
            species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;ISS] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0009927 "histidine
            phosphotransfer kinase activity" evidence=ISS;IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0043424 "protein histidine
            kinase binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009736 "cytokinin
            mediated signaling pathway" evidence=RCA;IMP] [GO:0080036
            "regulation of cytokinin mediated signaling pathway" evidence=IGI]
            [GO:0010029 "regulation of seed germination" evidence=RCA]
            [GO:0031537 "regulation of anthocyanin metabolic process"
            evidence=RCA] [GO:0048831 "regulation of shoot system development"
            evidence=RCA] InterPro:IPR008207 Pfam:PF01627 PROSITE:PS50894
            SMART:SM00073 GO:GO:0005829 GO:GO:0005634 GO:GO:0005737
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950 GO:GO:0009736
            GO:GO:0009927 GO:GO:0000160 HOGENOM:HOG000272680 KO:K14490
            GO:GO:0080036 Gene3D:1.20.120.160 SUPFAM:SSF47226
            ProtClustDB:CLSN2684116 EMBL:AB012569 EMBL:AB015143 EMBL:AB009054
            EMBL:AY050944 EMBL:AY091174 IPI:IPI00548925 RefSeq:NP_198750.1
            UniGene:At.25339 ProteinModelPortal:Q9SAZ5 SMR:Q9SAZ5 IntAct:Q9SAZ5
            STRING:Q9SAZ5 PaxDb:Q9SAZ5 PRIDE:Q9SAZ5 EnsemblPlants:AT5G39340.1
            GeneID:833930 KEGG:ath:AT5G39340 GeneFarm:3819 TAIR:At5g39340
            eggNOG:KOG4747 InParanoid:Q9SAZ5 OMA:RIPQVDI PhylomeDB:Q9SAZ5
            Genevestigator:Q9SAZ5 GermOnline:AT5G39340 Uniprot:Q9SAZ5
        Length = 155

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 38/73 (52%), Positives = 48/73 (65%)

Query:     1 DQQ-NVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEY 59
             DQ  NVDF  VG  VHQLKGSSSS+GA+RV  +C   +  C+ +N EGC + LQ +  EY
Sbjct:    67 DQTGNVDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIEY 126

Query:    60 YLVKNKLQTLFQV 72
               +K KLQ LF +
Sbjct:   127 KTLKAKLQDLFNL 139


>TAIR|locus:2016339 [details] [associations]
            symbol:HP6 "histidine phosphotransfer protein 6"
            species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;IDA] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=ISM] [GO:0016772 "transferase activity, transferring
            phosphorus-containing groups" evidence=ISS] [GO:0009735 "response
            to cytokinin stimulus" evidence=IEP] [GO:0009736 "cytokinin
            mediated signaling pathway" evidence=IMP] [GO:0009927 "histidine
            phosphotransfer kinase activity" evidence=IDA] [GO:0010089 "xylem
            development" evidence=IMP] InterPro:IPR008207 Pfam:PF01627
            PROSITE:PS50894 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0004871
            GO:GO:0009736 GO:GO:0000160 HOGENOM:HOG000272680 KO:K14490
            Gene3D:1.20.120.160 SUPFAM:SSF47226 EMBL:DQ093643 EMBL:AC009322
            IPI:IPI00543860 PIR:E96832 RefSeq:NP_178127.2 UniGene:At.52576
            ProteinModelPortal:Q9SSC9 SMR:Q9SSC9 STRING:Q9SSC9
            EnsemblPlants:AT1G80100.1 GeneID:844350 KEGG:ath:AT1G80100
            GeneFarm:3823 TAIR:At1g80100 eggNOG:NOG329115 InParanoid:Q9SSC9
            OMA:DETSPNF PhylomeDB:Q9SSC9 ProtClustDB:CLSN2708462
            Genevestigator:Q9SSC9 GermOnline:AT1G80100 GO:GO:0010089
            Uniprot:Q9SSC9
        Length = 154

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 36/72 (50%), Positives = 51/72 (70%)

Query:     1 DQQNVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYY 60
             D++  D+ K+G H++QL GSSSSIGA+RV NVC AFRS  E  N  GC + L+ ++ EY+
Sbjct:    69 DREFSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEHEYH 128

Query:    61 LVKNKLQTLFQV 72
              +KN +  LFQ+
Sbjct:   129 YLKNMMHELFQL 140


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.131   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       80        80   0.00091  102 3  11 22  0.38    29
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  477 (51 KB)
  Total size of DFA:  97 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.20u 0.10s 9.30t   Elapsed:  00:00:02
  Total cpu time:  9.20u 0.10s 9.30t   Elapsed:  00:00:02
  Start:  Thu May  9 22:01:06 2013   End:  Thu May  9 22:01:08 2013

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