BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043345
(80 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1 OS=Arabidopsis
thaliana GN=AHP1 PE=1 SV=1
Length = 154
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 64/79 (81%)
Query: 1 DQQNVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYY 60
DQQ VDF KV HVHQLKGSSSSIGAQRV N C FRSFCE++N+E C + LQ +KQEYY
Sbjct: 65 DQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYY 124
Query: 61 LVKNKLQTLFQVCLKSLAS 79
LVKN+L+TLF++ + +AS
Sbjct: 125 LVKNRLETLFKLEQQIVAS 143
>sp|Q9ZNV8|AHP2_ARATH Histidine-containing phosphotransfer protein 2 OS=Arabidopsis
thaliana GN=AHP2 PE=1 SV=1
Length = 156
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 4 NVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYYLVK 63
VDF++VG VHQLKGSSSS+GA+RV +C +F+ CE +N EGC + LQ + EY +K
Sbjct: 71 TVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYKALK 130
Query: 64 NKLQTLF 70
KLQ +F
Sbjct: 131 TKLQDMF 137
>sp|Q8L9T7|AHP5_ARATH Histidine-containing phosphotransfer protein 5 OS=Arabidopsis
thaliana GN=AHP5 PE=1 SV=2
Length = 157
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 4 NVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYYLVK 63
NVDF +V VHQLKGSSSS+GA+RV NVC +F+ C+ +N EGC + LQ + EY ++K
Sbjct: 72 NVDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDYEYKMLK 131
Query: 64 NKLQTLF 70
KLQ LF
Sbjct: 132 TKLQDLF 138
>sp|Q6VAK4|HP1_ORYSJ Histidine-containing phosphotransfer protein 1 OS=Oryza sativa
subsp. japonica GN=HP1 PE=1 SV=1
Length = 149
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 51/72 (70%)
Query: 1 DQQNVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYY 60
+Q V+F KV +VHQLKGSS+S+GAQ+V C FR FC++++ +GC L ++ ++Y
Sbjct: 66 EQPVVNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVRNDFY 125
Query: 61 LVKNKLQTLFQV 72
++NK QT+ Q+
Sbjct: 126 DLRNKFQTMLQL 137
>sp|Q9SSC9|AHP6_ARATH Histidine-containing phosphotransfer protein 6 OS=Arabidopsis
thaliana GN=AHP6 PE=2 SV=2
Length = 154
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 1 DQQNVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYY 60
D++ D+ K+G H++QL GSSSSIGA+RV NVC AFRS E N GC + L+ ++ EY+
Sbjct: 69 DREFSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEHEYH 128
Query: 61 LVKNKLQTLFQV 72
+KN + LFQ+
Sbjct: 129 YLKNMMHELFQL 140
>sp|Q9SAZ5|AHP3_ARATH Histidine-containing phosphotransfer protein 3 OS=Arabidopsis
thaliana GN=AHP3 PE=1 SV=2
Length = 155
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%)
Query: 4 NVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYYLVK 63
NVDF VG VHQLKGSSSS+GA+RV +C + C+ +N EGC + LQ + EY +K
Sbjct: 71 NVDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIEYKTLK 130
Query: 64 NKLQTLFQV 72
KLQ LF +
Sbjct: 131 AKLQDLFNL 139
>sp|Q9LU15|AHP4_ARATH Histidine-containing phosphotransfer protein 4 OS=Arabidopsis
thaliana GN=AHP4 PE=1 SV=2
Length = 127
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 4 NVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQEYYLVK 63
+ DF ++ ++HQ KGSS+SIGA +V CT FR +C N EGC + Q LK+E+ ++
Sbjct: 57 SFDFNRLDSYMHQFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHSTLR 116
Query: 64 NKLQTLFQV 72
KL+ FQ
Sbjct: 117 KKLEHYFQA 125
>sp|Q54RR8|RDEA_DICDI Phosphorelay intermediate protein rdeA OS=Dictyostelium discoideum
GN=rdeA PE=1 SV=1
Length = 254
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 13 HVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIEGCQQYLQHLKQE 58
H H +KGSSS IG + V V ++C+ +E + + LK+E
Sbjct: 63 HSHDIKGSSSYIGCEAVRYVSGKIEAYCKNDELEKAESFYPELKKE 108
>sp|A2ZET6|ARFW_ORYSI Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23
PE=2 SV=1
Length = 853
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 12 GHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIE 46
GH+ Q++ S++ +G QR+ ++ CE N+E
Sbjct: 66 GHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVE 100
>sp|Q2R3F5|ARFW_ORYSJ Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23
PE=1 SV=2
Length = 853
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 12 GHVHQLKGSSSSIGAQRVNNVCTAFRSFCEERNIE 46
GH+ Q++ S++ +G QR+ ++ CE N+E
Sbjct: 66 GHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVE 100
>sp|Q8TBA6|GOGA5_HUMAN Golgin subfamily A member 5 OS=Homo sapiens GN=GOLGA5 PE=1 SV=3
Length = 731
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 15/81 (18%)
Query: 3 QNVDFTKVGGHVHQLKGSSSSIGAQRVNNVCTAFRSFCE---------------ERNIEG 47
Q + K+ G +HQL+ + AQ+VN +A + E +E
Sbjct: 478 QREEIQKLMGQIHQLRSELQDMEAQQVNEAESAREQLQDLHDQIAGQKASKQELETELER 537
Query: 48 CQQYLQHLKQEYYLVKNKLQT 68
+Q +++++ Y KN LQ+
Sbjct: 538 LKQEFHYIEEDLYRTKNTLQS 558
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,885,544
Number of Sequences: 539616
Number of extensions: 770411
Number of successful extensions: 2048
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2038
Number of HSP's gapped (non-prelim): 14
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)